Query 013869
Match_columns 435
No_of_seqs 124 out of 2058
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 08:12:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013869.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013869hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 9.6E-64 2.1E-68 481.2 34.9 391 11-435 26-434 (537)
2 COG0318 CaiC Acyl-CoA syntheta 100.0 1.8E-62 3.9E-67 487.8 35.9 400 1-435 11-427 (534)
3 COG1022 FAA1 Long-chain acyl-C 100.0 2.4E-62 5.2E-67 475.1 35.4 395 2-435 17-475 (613)
4 PTZ00342 acyl-CoA synthetase; 100.0 7.5E-62 1.6E-66 494.1 37.8 408 2-435 62-596 (746)
5 KOG1177 Long chain fatty acid 100.0 4.2E-62 9.2E-67 439.4 31.6 399 2-435 51-487 (596)
6 PLN02736 long-chain acyl-CoA s 100.0 4.1E-61 8.8E-66 490.6 36.1 405 2-435 45-513 (651)
7 PLN02614 long-chain acyl-CoA s 100.0 1.6E-60 3.5E-65 485.1 35.1 403 2-435 46-522 (666)
8 PF00501 AMP-binding: AMP-bind 100.0 5.1E-61 1.1E-65 466.4 28.5 396 7-435 1-414 (417)
9 COG0365 Acs Acyl-coenzyme A sy 100.0 8.3E-60 1.8E-64 451.5 33.3 393 5-435 13-422 (528)
10 PLN02861 long-chain-fatty-acid 100.0 1.1E-59 2.4E-64 479.3 35.1 403 2-435 44-519 (660)
11 PTZ00216 acyl-CoA synthetase; 100.0 7.1E-59 1.5E-63 476.4 34.5 409 2-435 70-562 (700)
12 PRK06334 long chain fatty acid 100.0 2.3E-58 5.1E-63 460.4 37.1 396 2-435 20-436 (539)
13 PLN02387 long-chain-fatty-acid 100.0 1.3E-58 2.7E-63 473.5 35.0 414 2-435 59-561 (696)
14 PLN02860 o-succinylbenzoate-Co 100.0 3.5E-58 7.6E-63 462.3 37.4 397 1-435 7-440 (563)
15 PRK08180 feruloyl-CoA synthase 100.0 8.6E-58 1.9E-62 463.3 37.5 399 2-435 40-470 (614)
16 PRK07788 acyl-CoA synthetase; 100.0 7.1E-58 1.5E-62 459.3 36.1 396 2-435 50-453 (549)
17 KOG1256 Long-chain acyl-CoA sy 100.0 3.1E-58 6.7E-63 439.9 30.0 405 1-435 75-553 (691)
18 PLN02654 acetate-CoA ligase 100.0 3.6E-57 7.8E-62 461.4 36.8 399 4-435 91-539 (666)
19 PRK07529 AMP-binding domain pr 100.0 6.1E-57 1.3E-61 458.0 36.8 396 2-435 26-471 (632)
20 PRK08314 long-chain-fatty-acid 100.0 1E-56 2.2E-61 451.0 36.7 401 1-435 10-442 (546)
21 PRK12582 acyl-CoA synthetase; 100.0 1.6E-56 3.5E-61 454.9 36.7 400 1-435 49-482 (624)
22 PRK13295 cyclohexanecarboxylat 100.0 4.1E-56 8.9E-61 446.2 38.4 396 2-435 25-445 (547)
23 PRK07656 long-chain-fatty-acid 100.0 2.5E-56 5.5E-61 445.1 36.3 400 1-435 5-418 (513)
24 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 3.7E-56 8E-61 453.1 36.9 399 4-435 60-501 (625)
25 PTZ00237 acetyl-CoA synthetase 100.0 2.2E-56 4.8E-61 454.1 35.0 401 4-435 62-518 (647)
26 PLN02246 4-coumarate--CoA liga 100.0 5.7E-56 1.2E-60 444.3 37.2 400 1-435 23-438 (537)
27 PRK13382 acyl-CoA synthetase; 100.0 6.7E-56 1.4E-60 443.3 37.6 395 2-435 44-442 (537)
28 PRK05677 long-chain-fatty-acid 100.0 6.6E-56 1.4E-60 445.9 37.7 400 2-435 25-459 (562)
29 PRK06839 acyl-CoA synthetase; 100.0 1.1E-55 2.5E-60 438.5 37.3 391 2-435 3-397 (496)
30 TIGR02316 propion_prpE propion 100.0 9.2E-56 2E-60 449.7 37.0 399 4-435 55-498 (628)
31 PLN02574 4-coumarate--CoA liga 100.0 1.1E-55 2.4E-60 443.8 37.0 394 3-435 42-456 (560)
32 PLN02430 long-chain-fatty-acid 100.0 5.2E-56 1.1E-60 451.6 34.8 404 2-435 43-519 (660)
33 PRK07514 malonyl-CoA synthase; 100.0 2.4E-55 5.3E-60 436.9 38.4 396 2-435 4-403 (504)
34 PRK00174 acetyl-CoA synthetase 100.0 1.5E-55 3.2E-60 449.4 36.7 399 4-435 70-509 (637)
35 PRK06060 acyl-CoA synthetase; 100.0 1.1E-55 2.3E-60 454.9 34.9 381 2-435 5-391 (705)
36 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 2.9E-55 6.3E-60 438.2 36.8 400 1-435 23-434 (527)
37 PRK08043 bifunctional acyl-[ac 100.0 7.4E-56 1.6E-60 456.5 33.2 394 1-435 204-617 (718)
38 PRK07638 acyl-CoA synthetase; 100.0 1.9E-55 4E-60 435.6 34.8 384 1-435 1-387 (487)
39 PRK04319 acetyl-CoA synthetase 100.0 2E-55 4.3E-60 443.2 34.9 396 4-435 46-458 (570)
40 PRK09274 peptide synthase; Pro 100.0 2.3E-55 4.9E-60 441.6 35.0 392 1-435 6-446 (552)
41 PRK05852 acyl-CoA synthetase; 100.0 1.6E-54 3.4E-59 433.6 37.8 399 2-435 17-434 (534)
42 PRK08316 acyl-CoA synthetase; 100.0 1.5E-54 3.3E-59 433.3 37.5 398 2-435 12-421 (523)
43 COG1021 EntE Peptide arylation 100.0 4.1E-56 8.9E-61 392.1 22.7 399 2-435 29-440 (542)
44 PRK03640 O-succinylbenzoic aci 100.0 1.3E-54 2.7E-59 429.5 36.1 382 1-435 2-386 (483)
45 PRK06087 short chain acyl-CoA 100.0 2E-54 4.4E-59 434.2 38.0 398 2-435 24-436 (547)
46 PRK06145 acyl-CoA synthetase; 100.0 1.4E-54 3E-59 430.7 36.0 393 1-435 2-399 (497)
47 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 3.3E-54 7.1E-59 431.7 38.9 396 2-435 23-443 (538)
48 PRK06155 crotonobetaine/carnit 100.0 3.2E-54 7E-59 431.4 37.0 395 1-435 21-426 (542)
49 PRK05605 long-chain-fatty-acid 100.0 3.7E-54 8.1E-59 434.5 37.3 399 1-435 32-471 (573)
50 PRK06187 long-chain-fatty-acid 100.0 3.5E-54 7.5E-59 430.5 36.5 398 1-435 6-421 (521)
51 PRK05857 acyl-CoA synthetase; 100.0 1.6E-54 3.6E-59 433.5 33.9 395 2-435 15-428 (540)
52 TIGR03098 ligase_PEP_1 acyl-Co 100.0 7.9E-54 1.7E-58 427.3 37.4 397 2-435 1-420 (515)
53 PRK08008 caiC putative crotono 100.0 1.3E-53 2.8E-58 425.8 37.1 398 2-435 8-424 (517)
54 PRK07786 long-chain-fatty-acid 100.0 6.6E-54 1.4E-58 429.7 34.9 397 1-435 17-425 (542)
55 PLN02330 4-coumarate--CoA liga 100.0 9.7E-54 2.1E-58 428.9 36.1 396 1-435 28-443 (546)
56 PRK07769 long-chain-fatty-acid 100.0 5.8E-54 1.3E-58 437.2 34.8 394 1-435 21-489 (631)
57 PRK12476 putative fatty-acid-- 100.0 6.8E-54 1.5E-58 435.0 34.6 394 1-435 34-501 (612)
58 PRK10252 entF enterobactin syn 100.0 4.3E-54 9.4E-59 471.9 35.7 388 2-435 459-863 (1296)
59 PRK08315 AMP-binding domain pr 100.0 2E-53 4.3E-58 428.4 37.7 400 1-435 16-453 (559)
60 PRK12492 long-chain-fatty-acid 100.0 1.6E-53 3.5E-58 428.6 36.8 401 1-435 24-467 (562)
61 PRK10946 entE enterobactin syn 100.0 2.2E-53 4.7E-58 425.3 37.1 399 2-435 26-435 (536)
62 PRK12467 peptide synthase; Pro 100.0 2.8E-54 6E-59 504.5 35.4 386 2-435 3096-3497(3956)
63 PRK09088 acyl-CoA synthetase; 100.0 1.4E-53 3E-58 422.5 34.9 380 8-435 2-387 (488)
64 PRK10524 prpE propionyl-CoA sy 100.0 1.3E-53 2.8E-58 434.7 35.3 399 4-435 56-499 (629)
65 PRK08633 2-acyl-glycerophospho 100.0 1.3E-53 2.8E-58 463.6 36.7 398 2-435 616-1045(1146)
66 TIGR03443 alpha_am_amid L-amin 100.0 7.1E-54 1.5E-58 471.9 34.6 395 2-435 237-704 (1389)
67 PRK07787 acyl-CoA synthetase; 100.0 4.2E-53 9E-58 416.9 36.3 364 11-435 10-377 (471)
68 PRK06188 acyl-CoA synthetase; 100.0 3.3E-53 7.2E-58 423.4 36.0 396 2-435 13-419 (524)
69 PRK12583 acyl-CoA synthetase; 100.0 8.7E-53 1.9E-57 423.7 38.9 399 2-435 19-454 (558)
70 PRK07470 acyl-CoA synthetase; 100.0 4.1E-53 9E-58 423.1 36.1 397 1-435 7-420 (528)
71 PRK07059 Long-chain-fatty-acid 100.0 4.7E-53 1E-57 425.1 36.6 399 2-435 24-461 (557)
72 PLN03102 acyl-activating enzym 100.0 7.1E-53 1.5E-57 424.5 35.8 394 2-435 15-446 (579)
73 PRK06164 acyl-CoA synthetase; 100.0 1E-52 2.2E-57 421.4 36.7 397 1-435 10-432 (540)
74 PRK13383 acyl-CoA synthetase; 100.0 1.2E-52 2.6E-57 418.3 36.9 384 1-435 35-422 (516)
75 PRK08751 putative long-chain f 100.0 7.7E-53 1.7E-57 424.0 35.3 400 2-435 26-463 (560)
76 PRK05851 long-chain-fatty-acid 100.0 5.8E-53 1.2E-57 421.0 34.0 381 1-435 1-421 (525)
77 TIGR02262 benz_CoA_lig benzoat 100.0 1.9E-52 4.1E-57 416.4 37.3 396 4-435 7-410 (508)
78 PRK13388 acyl-CoA synthetase; 100.0 1.8E-52 3.9E-57 418.6 35.5 388 2-435 4-406 (540)
79 PRK03584 acetoacetyl-CoA synth 100.0 1.4E-52 3.1E-57 428.6 35.0 397 2-435 87-524 (655)
80 PRK06178 acyl-CoA synthetase; 100.0 3.8E-52 8.3E-57 419.4 37.1 399 1-435 33-468 (567)
81 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.7E-52 3.6E-57 416.4 34.0 386 2-435 1-399 (502)
82 PRK12316 peptide synthase; Pro 100.0 6.3E-53 1.4E-57 500.3 35.6 388 2-435 512-912 (5163)
83 PRK12316 peptide synthase; Pro 100.0 5.9E-53 1.3E-57 500.5 35.3 388 2-435 2004-2407(5163)
84 PRK12467 peptide synthase; Pro 100.0 9.5E-53 2.1E-57 491.7 36.1 388 2-435 513-916 (3956)
85 PRK05620 long-chain-fatty-acid 100.0 7E-52 1.5E-56 417.9 37.1 399 1-435 10-456 (576)
86 PRK06710 long-chain-fatty-acid 100.0 5.3E-52 1.2E-56 418.0 34.7 399 1-435 24-457 (563)
87 TIGR01217 ac_ac_CoA_syn acetoa 100.0 4.3E-52 9.3E-57 423.4 34.1 396 2-435 88-525 (652)
88 PLN03052 acetate--CoA ligase; 100.0 6.7E-52 1.4E-56 423.9 35.4 397 2-435 175-615 (728)
89 PRK05691 peptide synthase; Val 100.0 3.1E-52 6.6E-57 491.3 37.2 391 2-435 3721-4128(4334)
90 PRK07867 acyl-CoA synthetase; 100.0 1.1E-51 2.4E-56 411.7 35.3 387 2-435 6-407 (529)
91 PRK08279 long-chain-acyl-CoA s 100.0 1E-51 2.2E-56 418.7 35.1 394 1-435 37-465 (600)
92 TIGR03205 pimA dicarboxylate-- 100.0 3.5E-51 7.5E-56 410.1 37.8 397 2-435 22-447 (541)
93 PRK08974 long-chain-fatty-acid 100.0 2.7E-51 6E-56 412.6 37.1 399 2-435 24-458 (560)
94 PRK07008 long-chain-fatty-acid 100.0 1.7E-51 3.7E-56 411.9 35.1 394 2-435 11-435 (539)
95 PRK04813 D-alanine--poly(phosp 100.0 3.8E-51 8.1E-56 406.9 34.9 387 1-435 2-401 (503)
96 KOG1180 Acyl-CoA synthetase [L 100.0 1.3E-51 2.8E-56 377.7 28.7 412 2-434 42-540 (678)
97 PRK06814 acylglycerophosphoeth 100.0 4.9E-51 1.1E-55 442.1 37.9 393 2-435 632-1036(1140)
98 PRK13390 acyl-CoA synthetase; 100.0 6.2E-51 1.3E-55 404.7 34.6 390 8-435 4-405 (501)
99 PRK05850 acyl-CoA synthetase; 100.0 5.2E-51 1.1E-55 412.1 34.4 394 1-435 1-462 (578)
100 PRK05691 peptide synthase; Val 100.0 1.8E-51 3.9E-56 484.9 35.6 386 2-435 1132-1531(4334)
101 PRK06018 putative acyl-CoA syn 100.0 8.1E-51 1.8E-55 407.4 34.6 395 1-435 10-436 (542)
102 PLN02479 acetate-CoA ligase 100.0 5.6E-50 1.2E-54 403.2 37.4 398 1-435 20-456 (567)
103 PRK13391 acyl-CoA synthetase; 100.0 4.5E-50 9.8E-55 399.4 35.4 392 8-435 4-408 (511)
104 PRK09192 acyl-CoA synthetase; 100.0 5.6E-50 1.2E-54 404.2 35.2 394 1-435 21-464 (579)
105 PRK07798 acyl-CoA synthetase; 100.0 1.6E-49 3.4E-54 398.1 37.8 397 1-435 3-434 (533)
106 PRK09029 O-succinylbenzoic aci 100.0 1.5E-49 3.2E-54 390.3 34.1 354 2-435 3-357 (458)
107 TIGR01733 AA-adenyl-dom amino 100.0 1.3E-49 2.7E-54 385.4 32.7 363 28-435 1-381 (408)
108 PRK08162 acyl-CoA synthetase; 100.0 7.2E-49 1.6E-53 394.0 37.1 397 1-435 18-442 (545)
109 PRK12406 long-chain-fatty-acid 100.0 1.1E-48 2.5E-53 389.3 37.1 382 18-435 3-405 (509)
110 PRK08276 long-chain-fatty-acid 100.0 4.6E-49 9.9E-54 391.6 33.8 382 18-435 3-395 (502)
111 PRK07768 long-chain-fatty-acid 100.0 2.5E-48 5.5E-53 389.9 35.4 391 2-435 3-440 (545)
112 KOG1179 Very long-chain acyl-C 100.0 1.3E-48 2.9E-53 359.4 30.2 397 2-435 78-514 (649)
113 PRK07868 acyl-CoA synthetase; 100.0 1.7E-48 3.7E-53 411.3 34.5 383 1-435 447-862 (994)
114 PRK07445 O-succinylbenzoic aci 100.0 1.6E-48 3.4E-53 380.6 31.3 329 26-435 19-350 (452)
115 TIGR01923 menE O-succinylbenzo 100.0 1E-46 2.2E-51 368.3 31.8 345 28-435 1-346 (436)
116 KOG1175 Acyl-CoA synthetase [L 100.0 2.2E-46 4.8E-51 359.6 28.8 396 7-435 70-501 (626)
117 PLN03051 acyl-activating enzym 100.0 3.1E-46 6.7E-51 370.1 28.5 343 75-435 1-383 (499)
118 PRK08308 acyl-CoA synthetase; 100.0 2.3E-45 5E-50 355.7 33.8 317 19-435 1-317 (414)
119 PTZ00297 pantothenate kinase; 100.0 1.6E-40 3.4E-45 351.4 30.6 372 2-435 428-862 (1452)
120 COG1020 EntF Non-ribosomal pep 100.0 2.4E-38 5.2E-43 323.7 32.0 386 2-434 228-621 (642)
121 PRK07824 O-succinylbenzoic aci 100.0 2.5E-32 5.5E-37 259.5 21.9 224 166-435 31-259 (358)
122 KOG3628 Predicted AMP-binding 100.0 5.1E-26 1.1E-30 223.4 31.7 410 2-435 771-1255(1363)
123 TIGR02372 4_coum_CoA_lig 4-cou 100.0 2.3E-27 5.1E-32 224.7 20.0 206 168-435 93-301 (386)
124 TIGR02155 PA_CoA_ligase phenyl 99.9 1.8E-26 4E-31 223.7 19.4 236 168-435 73-321 (422)
125 TIGR03089 conserved hypothetic 99.9 3.4E-26 7.3E-31 201.0 18.0 207 7-271 2-227 (227)
126 TIGR03335 F390_ftsA coenzyme F 99.9 1.4E-21 3.1E-26 189.8 19.0 237 167-435 83-333 (445)
127 KOG1178 Non-ribosomal peptide 99.8 5.5E-20 1.2E-24 186.6 14.8 401 4-435 39-480 (1032)
128 COG1541 PaaK Coenzyme F390 syn 99.8 1.8E-17 3.9E-22 153.7 18.2 237 166-435 86-337 (438)
129 KOG3628 Predicted AMP-binding 99.7 1.2E-16 2.6E-21 158.2 16.4 399 3-435 96-596 (1363)
130 TIGR02304 aden_form_hyp probab 99.4 5.4E-12 1.2E-16 120.4 15.4 214 171-435 100-330 (430)
131 PF04443 LuxE: Acyl-protein sy 98.8 7.1E-07 1.5E-11 83.6 20.8 233 167-433 86-350 (365)
132 PRK09188 serine/threonine prot 97.5 7.3E-05 1.6E-09 70.2 3.2 26 407-432 207-233 (365)
133 PF03321 GH3: GH3 auxin-respon 97.2 0.00089 1.9E-08 66.6 6.8 114 299-434 263-398 (528)
134 PLN02620 indole-3-acetic acid- 96.7 0.047 1E-06 54.5 14.4 43 299-341 300-344 (612)
135 PLN02247 indole-3-acetic acid- 96.7 0.27 5.8E-06 49.3 19.2 43 299-341 289-333 (606)
136 PLN02249 indole-3-acetic acid- 95.7 0.23 5.1E-06 50.0 13.6 31 166-196 96-127 (597)
137 COG1541 PaaK Coenzyme F390 syn 95.2 0.24 5.1E-06 47.4 10.8 93 26-136 109-203 (438)
138 TIGR02155 PA_CoA_ligase phenyl 85.6 8.6 0.00019 37.3 10.8 89 26-132 94-184 (422)
139 TIGR03335 F390_ftsA coenzyme F 84.1 12 0.00026 36.7 11.0 84 26-129 105-190 (445)
140 PRK07656 long-chain-fatty-acid 80.5 16 0.00035 36.2 10.7 86 25-131 184-271 (513)
141 PF00501 AMP-binding: AMP-bind 78.0 17 0.00036 35.0 9.7 88 168-275 8-99 (417)
142 PRK06187 long-chain-fatty-acid 77.7 29 0.00062 34.5 11.5 85 26-131 186-271 (521)
143 PRK08315 AMP-binding domain pr 74.6 35 0.00076 34.4 11.3 85 25-129 217-303 (559)
144 PRK06334 long chain fatty acid 73.9 41 0.00089 33.9 11.5 98 14-131 181-289 (539)
145 PLN02736 long-chain acyl-CoA s 72.7 89 0.0019 32.4 13.8 86 188-285 77-166 (651)
146 PRK12583 acyl-CoA synthetase; 71.0 49 0.0011 33.3 11.3 84 25-128 219-304 (558)
147 KOG1177 Long chain fatty acid 71.0 76 0.0016 31.1 11.3 97 14-130 232-339 (596)
148 COG0031 CysK Cysteine synthase 70.9 45 0.00098 30.5 9.6 59 64-123 58-116 (300)
149 TIGR01923 menE O-succinylbenzo 69.5 32 0.00069 33.3 9.3 84 25-131 129-213 (436)
150 PRK04319 acetyl-CoA synthetase 69.5 42 0.00092 34.0 10.5 69 63-131 241-311 (570)
151 PRK09274 peptide synthase; Pro 68.0 57 0.0012 32.8 11.1 99 168-277 19-121 (552)
152 PRK06164 acyl-CoA synthetase; 67.7 62 0.0014 32.4 11.3 97 15-132 180-286 (540)
153 TIGR01733 AA-adenyl-dom amino 67.0 75 0.0016 30.2 11.3 88 25-132 138-228 (408)
154 PLN03051 acyl-activating enzym 66.1 47 0.001 33.0 9.9 68 64-131 156-224 (499)
155 PLN02860 o-succinylbenzoate-Co 65.7 63 0.0014 32.7 10.9 98 14-132 170-277 (563)
156 TIGR03098 ligase_PEP_1 acyl-Co 65.3 56 0.0012 32.4 10.3 86 25-131 179-265 (515)
157 PRK03640 O-succinylbenzoic aci 64.9 71 0.0015 31.4 10.9 67 64-131 178-245 (483)
158 TIGR03590 PseG pseudaminic aci 64.0 61 0.0013 29.4 9.4 82 18-123 2-88 (279)
159 PRK08308 acyl-CoA synthetase; 63.3 92 0.002 29.9 11.1 86 25-131 119-206 (414)
160 PRK08314 long-chain-fatty-acid 61.3 1E+02 0.0022 31.0 11.4 96 14-130 188-294 (546)
161 PRK06188 acyl-CoA synthetase; 60.1 1.1E+02 0.0023 30.6 11.3 86 25-131 186-271 (524)
162 PRK07638 acyl-CoA synthetase; 58.7 1.1E+02 0.0025 30.0 11.1 87 25-132 161-248 (487)
163 PRK07788 acyl-CoA synthetase; 58.7 60 0.0013 32.6 9.3 84 189-283 74-160 (549)
164 PRK08316 acyl-CoA synthetase; 58.2 95 0.0021 30.8 10.5 85 188-284 35-123 (523)
165 PRK05857 acyl-CoA synthetase; 58.2 77 0.0017 31.8 9.9 79 167-254 26-108 (540)
166 PLN02565 cysteine synthase 57.2 1.7E+02 0.0036 27.3 11.6 60 65-124 63-122 (322)
167 PRK07470 acyl-CoA synthetase; 57.1 1.2E+02 0.0026 30.3 11.0 67 64-130 202-269 (528)
168 PRK13388 acyl-CoA synthetase; 57.1 1E+02 0.0022 31.0 10.5 83 188-282 25-112 (540)
169 cd01563 Thr-synth_1 Threonine 56.6 1E+02 0.0022 28.7 9.7 60 68-128 70-129 (324)
170 PLN02556 cysteine synthase/L-3 56.1 1.7E+02 0.0036 27.9 11.0 60 64-123 106-165 (368)
171 TIGR03089 conserved hypothetic 56.0 34 0.00075 29.9 6.1 52 63-116 173-226 (227)
172 PRK06839 acyl-CoA synthetase; 54.5 1.3E+02 0.0029 29.5 10.8 96 168-284 15-115 (496)
173 PLN02387 long-chain-fatty-acid 54.2 1.5E+02 0.0033 31.0 11.5 86 188-285 105-194 (696)
174 KOG1176 Acyl-CoA synthetase [L 54.2 1E+02 0.0022 31.1 9.6 88 187-286 43-136 (537)
175 PRK13295 cyclohexanecarboxylat 54.1 1E+02 0.0022 31.0 10.0 78 168-250 37-117 (547)
176 PLN03013 cysteine synthase 53.3 1.2E+02 0.0026 29.6 9.6 61 64-124 170-230 (429)
177 PF02729 OTCace_N: Aspartate/o 53.2 1.2E+02 0.0026 24.4 10.3 76 64-140 35-119 (142)
178 PRK08279 long-chain-acyl-CoA s 53.1 1.3E+02 0.0027 30.8 10.6 85 25-130 217-303 (600)
179 PRK00174 acetyl-CoA synthetase 53.1 1.3E+02 0.0029 30.9 10.9 96 167-277 79-178 (637)
180 COG0318 CaiC Acyl-CoA syntheta 53.0 1.7E+02 0.0036 29.5 11.2 100 14-131 169-280 (534)
181 PLN02246 4-coumarate--CoA liga 52.6 83 0.0018 31.5 9.1 97 168-282 36-135 (537)
182 PLN03052 acetate--CoA ligase; 52.2 1.7E+02 0.0036 31.0 11.4 86 168-256 188-277 (728)
183 PLN02614 long-chain acyl-CoA s 52.1 2.3E+02 0.005 29.5 12.4 85 188-283 78-165 (666)
184 PLN03102 acyl-activating enzym 51.7 98 0.0021 31.5 9.5 82 189-281 39-123 (579)
185 PLN02330 4-coumarate--CoA liga 51.2 1E+02 0.0022 31.0 9.4 94 168-280 41-138 (546)
186 COG1022 FAA1 Long-chain acyl-C 50.9 1.8E+02 0.0039 29.9 10.8 100 12-132 187-296 (613)
187 PRK08008 caiC putative crotono 50.8 1.6E+02 0.0034 29.3 10.7 99 168-282 20-122 (517)
188 cd00640 Trp-synth-beta_II Tryp 50.7 1.8E+02 0.0038 25.6 11.3 60 67-127 49-108 (244)
189 TIGR03443 alpha_am_amid L-amin 50.7 1E+02 0.0022 35.3 10.3 86 167-254 248-336 (1389)
190 PRK02261 methylaspartate mutas 50.7 1.3E+02 0.0027 24.0 8.2 45 79-123 18-62 (137)
191 PRK06381 threonine synthase; V 50.5 2.1E+02 0.0046 26.5 10.8 58 71-128 65-122 (319)
192 PRK07798 acyl-CoA synthetase; 50.4 1.7E+02 0.0038 29.0 11.0 85 188-283 27-114 (533)
193 PRK10252 entF enterobactin syn 50.2 1.5E+02 0.0033 33.6 11.5 98 14-131 596-705 (1296)
194 TIGR01136 cysKM cysteine synth 50.1 2.1E+02 0.0045 26.3 11.3 59 65-124 55-113 (299)
195 cd01561 CBS_like CBS_like: Thi 49.8 88 0.0019 28.5 8.0 58 67-125 52-109 (291)
196 PRK03584 acetoacetyl-CoA synth 49.4 1.4E+02 0.003 30.9 10.3 82 168-255 97-182 (655)
197 PRK05620 long-chain-fatty-acid 49.3 1.6E+02 0.0036 29.8 10.7 68 63-130 219-287 (576)
198 PRK07514 malonyl-CoA synthase; 49.2 1.1E+02 0.0025 30.1 9.4 85 187-283 26-114 (504)
199 KOG0025 Zn2+-binding dehydroge 49.1 57 0.0012 29.6 6.1 65 64-128 157-222 (354)
200 PTZ00237 acetyl-CoA synthetase 49.1 1.8E+02 0.0039 30.1 11.0 94 168-276 74-171 (647)
201 PRK13383 acyl-CoA synthetase; 48.9 1.2E+02 0.0025 30.3 9.4 85 189-284 60-147 (516)
202 PRK08043 bifunctional acyl-[ac 48.7 1.7E+02 0.0036 30.8 10.9 95 14-128 363-468 (718)
203 PRK11761 cysM cysteine synthas 48.7 2.2E+02 0.0047 26.1 11.3 58 65-123 60-117 (296)
204 PLN02654 acetate-CoA ligase 48.4 1.9E+02 0.004 30.2 11.0 95 168-277 102-200 (666)
205 TIGR02188 Ac_CoA_lig_AcsA acet 48.1 1.9E+02 0.0041 29.7 11.0 96 167-277 69-168 (625)
206 PLN02861 long-chain-fatty-acid 47.9 1.4E+02 0.003 31.0 10.0 85 188-283 76-163 (660)
207 PRK07529 AMP-binding domain pr 47.9 1.4E+02 0.003 30.8 9.9 96 168-276 38-136 (632)
208 PRK05677 long-chain-fatty-acid 47.6 1.8E+02 0.0039 29.4 10.6 91 168-279 37-132 (562)
209 PRK08633 2-acyl-glycerophospho 47.3 1.8E+02 0.0039 32.5 11.4 99 13-131 779-888 (1146)
210 PRK08276 long-chain-fatty-acid 47.2 1.3E+02 0.0028 29.8 9.4 85 188-283 10-97 (502)
211 PRK07008 long-chain-fatty-acid 47.0 1.5E+02 0.0032 29.8 9.8 69 63-131 214-283 (539)
212 cd06448 L-Ser-dehyd Serine deh 46.8 1.2E+02 0.0026 28.2 8.4 58 66-124 49-106 (316)
213 PRK06155 crotonobetaine/carnit 46.4 1.2E+02 0.0026 30.5 9.1 84 189-284 46-133 (542)
214 PRK07476 eutB threonine dehydr 46.3 2.5E+02 0.0054 26.1 10.7 56 73-128 71-126 (322)
215 PTZ00342 acyl-CoA synthetase; 46.1 2.1E+02 0.0046 30.3 11.0 117 168-312 74-208 (746)
216 TIGR02262 benz_CoA_lig benzoat 45.7 2.1E+02 0.0045 28.3 10.6 67 63-129 198-266 (508)
217 TIGR02275 DHB_AMP_lig 2,3-dihy 45.2 2.2E+02 0.0047 28.4 10.8 97 14-131 181-289 (527)
218 PRK07059 Long-chain-fatty-acid 45.1 1.3E+02 0.0029 30.2 9.2 81 188-280 47-131 (557)
219 TIGR01217 ac_ac_CoA_syn acetoa 45.0 1.8E+02 0.0038 30.2 10.2 92 169-276 98-193 (652)
220 KOG0023 Alcohol dehydrogenase, 44.5 1.1E+02 0.0025 28.3 7.3 70 63-135 177-246 (360)
221 TIGR01139 cysK cysteine syntha 44.3 2.3E+02 0.0051 25.9 9.9 60 65-125 54-113 (298)
222 PRK09088 acyl-CoA synthetase; 44.2 1.9E+02 0.0042 28.3 10.1 77 189-277 22-102 (488)
223 PRK05605 long-chain-fatty-acid 44.0 1.4E+02 0.0031 30.2 9.2 95 168-283 45-143 (573)
224 PRK10946 entE enterobactin syn 43.8 1.9E+02 0.0041 29.0 10.1 97 14-131 180-288 (536)
225 PF02350 Epimerase_2: UDP-N-ac 43.8 1.9E+02 0.0041 27.2 9.3 82 30-132 50-140 (346)
226 PRK12406 long-chain-fatty-acid 43.6 1.5E+02 0.0032 29.5 9.2 85 189-284 11-98 (509)
227 PRK13390 acyl-CoA synthetase; 43.5 2.9E+02 0.0062 27.3 11.2 78 168-254 10-90 (501)
228 PF11142 DUF2917: Protein of u 43.0 76 0.0016 21.3 4.7 46 359-429 13-58 (63)
229 cd06447 D-Ser-dehyd D-Serine d 42.7 1.4E+02 0.0029 29.0 8.2 60 71-130 136-195 (404)
230 cd07050 BMC_EutL_repeat2 ethan 42.5 51 0.0011 23.2 3.8 34 63-96 10-43 (87)
231 PRK05850 acyl-CoA synthetase; 42.5 2.9E+02 0.0062 27.9 11.2 102 168-284 14-124 (578)
232 TIGR02035 D_Ser_am_lyase D-ser 42.4 1.3E+02 0.0028 29.4 8.1 61 71-131 154-214 (431)
233 cd01562 Thr-dehyd Threonine de 42.3 1.6E+02 0.0034 27.0 8.5 56 73-128 69-124 (304)
234 PRK13391 acyl-CoA synthetase; 42.3 2.8E+02 0.0061 27.4 11.0 96 168-282 10-109 (511)
235 PRK06087 short chain acyl-CoA 42.1 1.6E+02 0.0034 29.6 9.2 77 168-254 36-116 (547)
236 TIGR02316 propion_prpE propion 41.9 2.9E+02 0.0062 28.5 11.2 94 168-276 65-162 (628)
237 PRK06060 acyl-CoA synthetase; 41.8 1.5E+02 0.0033 31.0 9.2 91 168-279 19-112 (705)
238 PRK06814 acylglycerophosphoeth 41.7 2.9E+02 0.0063 30.9 11.9 97 14-130 791-898 (1140)
239 PRK12476 putative fatty-acid-- 40.7 4.1E+02 0.0089 27.2 12.1 102 168-283 47-156 (612)
240 PRK08751 putative long-chain f 40.3 1.7E+02 0.0037 29.4 9.2 94 168-282 38-136 (560)
241 PRK05852 acyl-CoA synthetase; 39.8 3.5E+02 0.0076 27.0 11.3 88 25-132 194-284 (534)
242 KOG1250 Threonine/serine dehyd 39.7 1.3E+02 0.0029 28.6 7.2 58 69-128 116-173 (457)
243 PRK07787 acyl-CoA synthetase; 38.8 3.3E+02 0.0072 26.6 10.8 85 25-131 146-232 (471)
244 PRK12492 long-chain-fatty-acid 38.7 1.6E+02 0.0035 29.7 8.7 78 188-277 48-130 (562)
245 PLN02574 4-coumarate--CoA liga 38.6 3.5E+02 0.0075 27.3 11.1 101 14-131 196-308 (560)
246 PRK08162 acyl-CoA synthetase; 38.4 1.7E+02 0.0037 29.3 8.8 83 189-283 43-129 (545)
247 PF03744 BioW: 6-carboxyhexano 38.3 33 0.00071 30.1 3.0 39 380-433 175-223 (239)
248 COG1064 AdhP Zn-dependent alco 38.3 1.1E+02 0.0024 28.7 6.5 57 63-123 162-218 (339)
249 PLN02430 long-chain-fatty-acid 38.2 4.8E+02 0.01 27.1 12.4 82 188-280 75-159 (660)
250 PRK13382 acyl-CoA synthetase; 37.9 2.2E+02 0.0048 28.5 9.5 82 189-281 68-152 (537)
251 PRK06382 threonine dehydratase 37.3 3.8E+02 0.0082 25.9 10.5 56 73-128 77-132 (406)
252 PRK06178 acyl-CoA synthetase; 37.3 2E+02 0.0043 29.0 9.1 84 189-284 58-145 (567)
253 PRK10524 prpE propionyl-CoA sy 37.2 3.2E+02 0.0069 28.1 10.7 94 168-276 66-163 (629)
254 PRK06018 putative acyl-CoA syn 37.1 1.9E+02 0.0041 29.0 8.9 82 188-280 38-122 (542)
255 TIGR01747 diampropi_NH3ly diam 37.1 1.6E+02 0.0035 28.1 7.7 60 69-128 94-153 (376)
256 cd02067 B12-binding B12 bindin 36.8 1.9E+02 0.0041 22.0 7.6 42 82-123 17-58 (119)
257 PLN00011 cysteine synthase 36.7 2.5E+02 0.0055 26.1 8.9 60 64-124 64-124 (323)
258 PLN02479 acetate-CoA ligase 36.6 2.3E+02 0.005 28.6 9.5 95 167-281 32-129 (567)
259 PRK10717 cysteine synthase A; 36.5 2.6E+02 0.0057 26.0 9.0 59 65-124 61-119 (330)
260 TIGR01127 ilvA_1Cterm threonin 36.4 3.7E+02 0.0081 25.6 10.3 58 72-129 51-108 (380)
261 TIGR03208 cyc_hxne_CoA_lg cycl 36.2 4E+02 0.0087 26.6 11.1 96 14-130 193-299 (538)
262 TIGR00260 thrC threonine synth 35.9 3.6E+02 0.0078 25.0 10.7 58 71-128 73-131 (328)
263 PF06543 Lac_bphage_repr: Lact 35.9 31 0.00067 21.5 1.7 26 306-331 22-47 (49)
264 PRK09162 hypoxanthine-guanine 35.7 1.1E+02 0.0023 25.7 5.7 51 24-93 14-64 (181)
265 PRK05851 long-chain-fatty-acid 35.7 3.1E+02 0.0067 27.4 10.1 95 14-128 150-258 (525)
266 COG0365 Acs Acyl-coenzyme A sy 34.6 3.1E+02 0.0068 27.6 9.5 95 171-281 25-124 (528)
267 PRK02991 D-serine dehydratase; 34.6 2E+02 0.0044 28.2 8.1 60 72-131 160-219 (441)
268 PRK12483 threonine dehydratase 34.6 4.8E+02 0.01 26.3 10.8 59 73-131 89-147 (521)
269 cd01445 TST_Repeats Thiosulfat 34.6 1.1E+02 0.0024 24.3 5.3 34 63-96 90-126 (138)
270 TIGR00936 ahcY adenosylhomocys 34.4 2.3E+02 0.005 27.4 8.3 67 66-132 30-102 (406)
271 PF02073 Peptidase_M29: Thermo 34.3 1.4E+02 0.003 28.9 6.8 53 32-99 3-57 (398)
272 TIGR03595 Obg_CgtA_exten Obg f 34.3 57 0.0012 22.4 3.1 33 34-74 31-63 (69)
273 COG2236 Predicted phosphoribos 34.1 63 0.0014 27.4 4.0 35 25-76 5-39 (192)
274 PRK08197 threonine synthase; V 33.6 3.5E+02 0.0076 26.0 9.6 57 71-127 129-185 (394)
275 PRK08638 threonine dehydratase 33.2 2.8E+02 0.0061 26.0 8.6 58 72-129 78-135 (333)
276 PRK06721 threonine synthase; R 33.1 2.9E+02 0.0062 26.1 8.7 58 71-128 77-135 (352)
277 TIGR01734 D-ala-DACP-lig D-ala 32.7 2.2E+02 0.0047 28.1 8.4 79 188-277 24-105 (502)
278 PRK06110 hypothetical protein; 32.6 3.8E+02 0.0083 24.8 9.4 59 72-130 73-131 (322)
279 PLN02550 threonine dehydratase 32.6 5.7E+02 0.012 26.3 11.8 55 75-129 163-217 (591)
280 PRK07867 acyl-CoA synthetase; 32.5 5.2E+02 0.011 25.8 11.3 95 14-129 150-255 (529)
281 PRK05973 replicative DNA helic 32.4 1.4E+02 0.003 26.4 6.0 52 64-115 60-115 (237)
282 PRK05752 uroporphyrinogen-III 32.2 1.5E+02 0.0033 26.4 6.5 53 34-86 13-74 (255)
283 TIGR02991 ectoine_eutB ectoine 31.9 2.4E+02 0.0051 26.2 7.9 56 73-128 71-126 (317)
284 PTZ00216 acyl-CoA synthetase; 31.9 4E+02 0.0087 27.9 10.5 88 186-284 118-208 (700)
285 COG1171 IlvA Threonine dehydra 31.5 2.2E+02 0.0047 26.8 7.3 62 70-133 77-138 (347)
286 PRK07769 long-chain-fatty-acid 31.5 5.9E+02 0.013 26.1 12.1 102 168-283 34-143 (631)
287 PRK08246 threonine dehydratase 31.3 4.2E+02 0.0092 24.4 9.7 60 68-128 68-127 (310)
288 PF09153 DUF1938: Domain of un 31.3 1.3E+02 0.0028 21.4 4.4 31 18-48 16-53 (86)
289 PRK07786 long-chain-fatty-acid 31.1 2.6E+02 0.0057 28.0 8.8 80 189-280 42-125 (542)
290 PLN02356 phosphateglycerate ki 31.0 3.2E+02 0.007 26.6 8.7 56 66-122 102-157 (423)
291 TIGR03714 secA2 accessory Sec 31.0 2E+02 0.0044 30.4 7.7 97 14-128 388-484 (762)
292 PF00291 PALP: Pyridoxal-phosp 30.7 3E+02 0.0065 25.0 8.4 56 68-124 56-111 (306)
293 TIGR01138 cysM cysteine syntha 30.3 4.2E+02 0.0092 24.1 13.1 58 65-123 56-113 (290)
294 PRK07591 threonine synthase; V 29.9 3.1E+02 0.0068 26.7 8.6 56 73-128 141-196 (421)
295 PRK06710 long-chain-fatty-acid 29.7 2.4E+02 0.0052 28.4 8.2 78 189-278 49-130 (563)
296 PRK09029 O-succinylbenzoic aci 29.6 2.6E+02 0.0056 27.2 8.2 66 188-255 27-95 (458)
297 KOG1794 N-Acetylglucosamine ki 29.5 1.3E+02 0.0028 27.4 5.2 74 302-376 68-143 (336)
298 TIGR03528 2_3_DAP_am_ly diamin 29.4 2.5E+02 0.0054 27.1 7.7 58 71-128 115-172 (396)
299 PF10411 DsbC_N: Disulfide bon 29.3 49 0.0011 21.6 2.1 19 414-432 33-51 (57)
300 PRK07048 serine/threonine dehy 29.1 3.6E+02 0.0077 25.0 8.6 54 73-126 76-129 (321)
301 PRK10719 eutA reactivating fac 28.8 5.1E+02 0.011 25.6 9.5 52 16-85 374-426 (475)
302 cd06404 PB1_aPKC PB1 domain is 28.8 1.1E+02 0.0023 22.0 3.7 50 17-77 10-59 (83)
303 COG4009 Uncharacterized protei 28.7 1.9E+02 0.0042 20.3 4.8 68 26-121 9-79 (88)
304 PRK08526 threonine dehydratase 28.6 2.4E+02 0.0052 27.3 7.5 59 73-131 72-130 (403)
305 PF00667 FAD_binding_1: FAD bi 28.0 61 0.0013 28.2 3.1 30 62-91 39-68 (219)
306 PRK07768 long-chain-fatty-acid 28.0 5.2E+02 0.011 25.8 10.3 96 14-129 150-260 (545)
307 PRK08180 feruloyl-CoA synthase 27.3 5.8E+02 0.013 26.1 10.6 100 14-131 207-320 (614)
308 PRK11706 TDP-4-oxo-6-deoxy-D-g 27.3 2.2E+02 0.0047 27.1 7.0 55 63-121 66-125 (375)
309 PF01436 NHL: NHL repeat; Int 27.3 39 0.00084 18.3 1.1 14 420-433 10-23 (28)
310 PRK04813 D-alanine--poly(phosp 27.2 3E+02 0.0065 27.0 8.4 65 189-255 27-94 (503)
311 COG1167 ARO8 Transcriptional r 27.1 1.3E+02 0.0029 29.6 5.6 57 66-123 177-234 (459)
312 cd02071 MM_CoA_mut_B12_BD meth 26.7 3E+02 0.0064 21.2 8.5 40 84-123 19-58 (122)
313 TIGR02379 ECA_wecE TDP-4-keto- 26.5 2E+02 0.0044 27.4 6.6 55 63-121 66-125 (376)
314 PF06277 EutA: Ethanolamine ut 26.4 5.8E+02 0.013 25.2 9.4 51 15-83 372-423 (473)
315 COG1224 TIP49 DNA helicase TIP 26.3 1.3E+02 0.0028 28.4 4.8 96 317-432 112-209 (450)
316 PRK08974 long-chain-fatty-acid 26.2 2.9E+02 0.0063 27.8 8.1 92 168-279 36-131 (560)
317 PF01060 DUF290: Transthyretin 26.2 1.6E+02 0.0034 20.8 4.4 17 356-372 6-22 (80)
318 PRK08198 threonine dehydratase 25.9 4.8E+02 0.01 25.2 9.1 57 74-130 75-131 (404)
319 KOG3460 Small nuclear ribonucl 25.9 53 0.0011 23.1 1.7 40 18-78 49-88 (91)
320 PRK09224 threonine dehydratase 25.7 6.9E+02 0.015 25.1 10.3 57 73-129 72-128 (504)
321 PRK06815 hypothetical protein; 25.1 3.2E+02 0.0069 25.3 7.5 56 73-128 72-127 (317)
322 TIGR01124 ilvA_2Cterm threonin 24.8 3E+02 0.0064 27.6 7.5 56 73-128 69-124 (499)
323 TIGR01137 cysta_beta cystathio 24.6 6.7E+02 0.014 24.5 10.2 57 66-123 60-116 (454)
324 PRK11493 sseA 3-mercaptopyruva 24.5 1.5E+02 0.0033 26.9 5.1 53 26-95 201-258 (281)
325 PRK08206 diaminopropionate amm 24.5 3.5E+02 0.0075 26.1 7.8 59 72-130 119-177 (399)
326 PRK10696 tRNA 2-thiocytidine b 24.4 5.1E+02 0.011 23.1 10.2 62 64-125 25-97 (258)
327 COG0399 WecE Predicted pyridox 24.1 2.9E+02 0.0062 26.4 6.9 71 63-137 69-149 (374)
328 PRK13237 tyrosine phenol-lyase 24.0 4.4E+02 0.0096 26.0 8.2 48 63-115 112-174 (460)
329 PRK07334 threonine dehydratase 24.0 3.1E+02 0.0068 26.4 7.4 56 73-128 75-130 (403)
330 PRK15400 lysine decarboxylase 23.9 1.9E+02 0.0041 30.3 6.0 62 64-128 231-311 (714)
331 PLN02409 serine--glyoxylate am 23.3 3.6E+02 0.0078 25.9 7.7 14 108-121 100-113 (401)
332 COG2351 Transthyretin-like pro 23.1 1.1E+02 0.0024 23.5 3.1 17 356-372 19-35 (124)
333 TIGR03205 pimA dicarboxylate-- 23.1 4.1E+02 0.0088 26.6 8.5 76 189-276 46-125 (541)
334 PRK12582 acyl-CoA synthetase; 22.8 3.8E+02 0.0082 27.5 8.3 56 188-245 79-137 (624)
335 PLN02238 hypoxanthine phosphor 22.7 2.3E+02 0.005 24.0 5.5 21 25-45 10-30 (189)
336 COG0604 Qor NADPH:quinone redu 22.6 5.4E+02 0.012 23.9 8.5 66 63-132 138-206 (326)
337 TIGR00649 MG423 conserved hypo 22.6 5.9E+02 0.013 24.7 9.1 61 63-123 314-383 (422)
338 TIGR01203 HGPRTase hypoxanthin 22.5 2.6E+02 0.0056 23.0 5.7 19 27-45 3-21 (166)
339 PF07994 NAD_binding_5: Myo-in 22.2 5.7E+02 0.012 23.5 8.2 38 81-118 189-228 (295)
340 PRK09192 acyl-CoA synthetase; 22.2 5.6E+02 0.012 25.9 9.3 86 187-284 47-143 (579)
341 COG1021 EntE Peptide arylation 22.1 7.4E+02 0.016 24.1 9.7 52 190-243 54-108 (542)
342 TIGR02372 4_coum_CoA_lig 4-cou 21.9 7.1E+02 0.015 23.8 12.4 86 24-130 112-199 (386)
343 TIGR02370 pyl_corrinoid methyl 21.2 5.2E+02 0.011 22.0 10.7 54 70-123 86-143 (197)
344 COG4821 Uncharacterized protei 21.1 1E+02 0.0022 26.3 2.8 57 31-124 84-140 (243)
345 PF01041 DegT_DnrJ_EryC1: DegT 21.1 2.3E+02 0.005 26.8 5.9 56 63-122 60-120 (363)
346 KOG1252 Cystathionine beta-syn 21.0 3E+02 0.0065 25.7 6.1 61 64-124 99-159 (362)
347 PF07894 DUF1669: Protein of u 20.9 6.5E+02 0.014 23.0 9.2 75 183-257 117-195 (284)
348 COG2062 SixA Phosphohistidine 20.9 3.9E+02 0.0085 22.1 6.2 90 7-115 6-98 (163)
349 cd01449 TST_Repeat_2 Thiosulfa 20.8 2.2E+02 0.0048 21.4 4.8 32 63-94 73-104 (118)
350 PF13550 Phage-tail_3: Putativ 20.8 1.4E+02 0.003 24.1 3.8 43 34-76 109-151 (164)
351 cd02070 corrinoid_protein_B12- 20.3 5.4E+02 0.012 21.9 10.8 91 23-123 47-141 (201)
352 PF09269 DUF1967: Domain of un 20.2 84 0.0018 21.6 1.9 11 63-73 52-62 (69)
353 PRK08813 threonine dehydratase 20.0 7.5E+02 0.016 23.4 10.7 57 72-128 84-140 (349)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=9.6e-64 Score=481.19 Aligned_cols=391 Identities=30% Similarity=0.452 Sum_probs=332.7
Q ss_pred cccCCCe-eEEEeC---CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHH
Q 013869 11 GSMARDS-VAIRAD---QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVL 86 (435)
Q Consensus 11 ~~~~p~~-~al~~~---~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~l 86 (435)
+..++++ +.++.. ++.+||+|++.++.++|..|.+.+ .|+++||+|++++||+++++++++
T Consensus 26 ~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~---------------~~i~~gDvV~i~~pNs~~~~~~~l 90 (537)
T KOG1176|consen 26 AFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELG---------------LGIKKGDVVGILAPNTPEFVELAL 90 (537)
T ss_pred ccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcC---------------CCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3333444 666654 499999999999999999999853 258999999999999999999999
Q ss_pred HHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccc-------cccc-
Q 013869 87 GTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETT-------VFDQ- 158 (435)
Q Consensus 87 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~- 158 (435)
||++.|+++.++||.+.+.++.+.++.++++++|++.+..+.+..........+..+........... ....
T Consensus 91 a~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 170 (537)
T KOG1176|consen 91 AVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLM 170 (537)
T ss_pred HHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhcc
Confidence 99999999999999999999999999999999999999999988887665544443332211000000 0000
Q ss_pred ---hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHH
Q 013869 159 ---SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLY 235 (435)
Q Consensus 159 ---~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~ 235 (435)
.+.. ......+|++.++|||||||.||||.+||++++.+.......+.+...++.++.+|++|.+|+...+.+.+.
T Consensus 171 ~~~~~~~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~ 249 (537)
T KOG1176|consen 171 PEGLPDG-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLA 249 (537)
T ss_pred ccCCCcc-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHh
Confidence 0111 345567999999999999999999999999999998888888888889999999999999999875555777
Q ss_pred cCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCC
Q 013869 236 AGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSAL 315 (435)
Q Consensus 236 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l 315 (435)
.|+++++...|++..++.. +++|++|++.++|.++..|++... ....+++++|.+.+||+++
T Consensus 250 ~~~~ii~~~~f~~~~~~~~----------i~kykvt~~~~vP~~~~~l~~~p~--------~~~~~l~sl~~v~~gga~~ 311 (537)
T KOG1176|consen 250 GGTTIICLRKFDAELFLDL----------IEKYKVTHLFLVPPVLNMLAKSPI--------VKKYDLSSLRSVLSGGAPL 311 (537)
T ss_pred CCceEEECCCCCHHHHHHH----------HHHhCEEEEEcChHHHHHHhcCCc--------cCcccCCccEEEEecCCCC
Confidence 7788888888999999999 777999999999999999998642 3445799999999999999
Q ss_pred CHHHHHHHHHHhC-CcccccccCccccchhccCCCCC-CCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccc
Q 013869 316 PLPVMQQWETITG-HRLLERYGMTEFVMAISNPLRGA-RKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFK 392 (435)
Q Consensus 316 ~~~l~~~~~~~~~-~~l~~~YG~tE~~~~~~~~~~~~-~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~ 392 (435)
++++.+++.+.++ ..+.+.||+||+++.++.+.... .+++++|.+++++++++.++.|+..+.+ .||||++|+++++
T Consensus 312 ~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~e~g~~l~~~~~GEI~vrg~~imk 391 (537)
T KOG1176|consen 312 SPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLDETGVSLGPNQTGEICVRGPQVMK 391 (537)
T ss_pred CHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccccceEEEeeCCCCCCCCCCCceEEEEECcccch
Confidence 9999999999998 88999999999996666444333 5899999999999999999999887666 8999999999999
Q ss_pred cccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 393 EYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 393 gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
||++||+.|++.|+++|||+|||+|++|+||+|++.||++|+|
T Consensus 392 GY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlI 434 (537)
T KOG1176|consen 392 GYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLI 434 (537)
T ss_pred hhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhhe
Confidence 9999999999999888999999999999999999999999987
No 2
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.8e-62 Score=487.85 Aligned_cols=400 Identities=30% Similarity=0.494 Sum_probs=335.7
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcc--cCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKS--YSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~--~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~ 78 (435)
+++.+.|.++++++|+++|+++.+.. +||+||.++++++|++|++. |+++||+|+|+++|+
T Consensus 11 ~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~-----------------~v~~gdrVail~~N~ 73 (534)
T COG0318 11 LTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQAL-----------------GVKPGDRVAILLPNS 73 (534)
T ss_pred ccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCC
Confidence 47889999999999999999998877 99999999999999999995 799999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCC-CCCCC---Cccc
Q 013869 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPP-VPNVS---SETT 154 (435)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~ 154 (435)
+++++++|||+++|++++|+||.++..++.++++.+++++++++.++.+.+.......+........ ..... ....
T Consensus 74 ~e~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (534)
T COG0318 74 PEFLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEA 153 (534)
T ss_pred HHHHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHH
Confidence 9999999999999999999999999999999999999999999998666555554433111111111 11110 0011
Q ss_pred cccch--hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhcc--CCCCCeeEEeecchhhhHHHHHH
Q 013869 155 VFDQS--QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YTSADQFLHCLPLHHVHGLFNAL 230 (435)
Q Consensus 155 ~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~l~~~pl~~~~g~~~~~ 230 (435)
..... .........++++++++|||||||.||+|.+||++++.+.......+. +...|++++++|++|.+|+...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~ 233 (534)
T COG0318 154 LAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGL 233 (534)
T ss_pred HhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHH
Confidence 11100 001111267899999999999999999999999999999999988888 89999999999999999999877
Q ss_pred HHHHHcCCEEEEcC--CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhcc-ccEE
Q 013869 231 LAPLYAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK-QLRL 307 (435)
Q Consensus 231 ~~~l~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~-~lr~ 307 (435)
..++..|+++++.+ .|++...+.. +.++++|++.++|+++..+++..+... ..++ ++|.
T Consensus 234 ~~~~~~G~~~v~~~~~~f~~~~~~~~----------i~~~~~t~~~~vPt~~~~ll~~~~~~~--------~~~~~~lr~ 295 (534)
T COG0318 234 LAPLLGGGTLVLLSPEPFDPEEVLWL----------IEKYKVTVLSGVPTFLRELLDNPEKDD--------DDLSSSLRL 295 (534)
T ss_pred HHHHHcCCEEEeCCCCCcCHHHHHHH----------HHHhcceEEecchHHHHHHHhCCccCc--------cccccceEE
Confidence 77899999999998 5999998888 555789999999999999998755332 2233 4999
Q ss_pred EEecCCCCCHHHHHHHHHHhC-CcccccccCccccchhccCCCCC--CCCCccceecCCCeEEEecCCCC-CCCCccceE
Q 013869 308 MMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESG-SDAAGVGEI 383 (435)
Q Consensus 308 i~~~G~~l~~~l~~~~~~~~~-~~l~~~YG~tE~~~~~~~~~~~~--~~~~~~G~p~~~~~~~i~d~~~~-~~~~~~Gel 383 (435)
++.||++++++++++|.+.|+ ..+++.||+||++..++...... ...+++|.|+|+++++|+|+++. ..++.+|||
T Consensus 296 ~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~pg~vGei 375 (534)
T COG0318 296 VLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLPGEVGEI 375 (534)
T ss_pred EEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCCCCceEE
Confidence 999999999999999999997 57999999999987655444333 46777899999999999997775 455458999
Q ss_pred EEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 384 CVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 384 ~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+++||+++.||+++|+.|.+.|+++|||+|||+|++|+||+++|.||.+|+|
T Consensus 376 ~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I 427 (534)
T COG0318 376 WVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLI 427 (534)
T ss_pred EEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEE
Confidence 9999999999999999999988767999999999999999999999999986
No 3
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2.4e-62 Score=475.07 Aligned_cols=395 Identities=28% Similarity=0.418 Sum_probs=321.1
Q ss_pred hHHHHHHHhcccCCCeeEEEe----CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCC
Q 013869 2 EVFKAAYKKGSMARDSVAIRA----DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~----~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~ 77 (435)
++.+.+.++++.+|+.+|+.. ..+.+||+|+.+++..+|++|+.. |+..||+|+|++.|
T Consensus 17 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~l-----------------g~~~gdrvai~a~n 79 (613)
T COG1022 17 TLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSL-----------------GIPAGDRVAIFAAN 79 (613)
T ss_pred cHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhc-----------------CCCCCCEEEEEeCC
Confidence 567889999999999999984 568999999999999999999994 88779999999999
Q ss_pred CHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhH-HHHHHHHhccCCccccCCCCC---------
Q 013869 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-EVLQNVASKSGAKFSLIPPVP--------- 147 (435)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------- 147 (435)
+++|+++.+|||.+|++.||+++..+++++.++|+.+++++||++.... +.+......++..+.......
T Consensus 80 r~eW~i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (613)
T COG1022 80 RPEWAIADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAK 159 (613)
T ss_pred CHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchh
Confidence 9999999999999999999999999999999999999999999998444 343333332211000000000
Q ss_pred -----CCCCc-cc---cccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhcc-CCCCCeeEEe
Q 013869 148 -----NVSSE-TT---VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE-YTSADQFLHC 217 (435)
Q Consensus 148 -----~~~~~-~~---~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~l~~ 217 (435)
..... .. ..............++|.|.|+|||||||.||||++||+|+++++........ ..+.|+.++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~Lsf 239 (613)
T COG1022 160 ALVLEVFPDEGISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSF 239 (613)
T ss_pred hccccccccccchhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEe
Confidence 00000 00 00111111224678999999999999999999999999999999999999996 9999999999
Q ss_pred ecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHH---
Q 013869 218 LPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTEL--- 294 (435)
Q Consensus 218 ~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~--- 294 (435)
+|+.|++..++... +..++.+......++..++.. +..++||.+.++|.+|+.+.+...+.-.+.
T Consensus 240 LPlaHi~Er~~~~~--~~~~~g~~~~~~~~~~~~~~d----------l~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~ 307 (613)
T COG1022 240 LPLAHIFERAFEGG--LALYGGVTVLFKEDPRTLLED----------LKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAV 307 (613)
T ss_pred CcHHHHHHHHHHHH--HHhhcceEEEecCCHHHHHHH----------HHHhCCeEEeechHHHHHHHHHHHHHHHhcchh
Confidence 99999999875433 444444444455678888888 455899999999999999887642111000
Q ss_pred -------------------------------------HHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccC
Q 013869 295 -------------------------------------QAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGM 337 (435)
Q Consensus 295 -------------------------------------~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~ 337 (435)
.+........+|++++||+++++++...++.. ++++.+.||+
T Consensus 308 ~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-Gi~i~eGYGl 386 (613)
T COG1022 308 RRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-GIPILEGYGL 386 (613)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-CCCeEEEecc
Confidence 01111223589999999999999998888886 8999999999
Q ss_pred ccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCccceEEEecCCccccccCCchhcccccccCCccccCceE
Q 013869 338 TEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTG 417 (435)
Q Consensus 338 tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g 417 (435)
||++++++.........+++|+|+|+++++|+|+ |||+||||++++|||++|+.|.++|++||||+|||+|
T Consensus 387 TEts~~~~v~~~~~~~~gtvG~p~p~~evKI~d~---------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg 457 (613)
T COG1022 387 TETSAVVSVNPPDRFVLGTVGKPLPGIEVKIADD---------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLG 457 (613)
T ss_pred cccccceEEccccCcccCCcCCcCCCceEEEccC---------ceEEEecchhcchhcCChHHHhhhccccCCcccCcee
Confidence 9999888877777788999999999999999996 9999999999999999999999999999999999999
Q ss_pred EEcCCccEEEecccccCC
Q 013869 418 KQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 418 ~~~~dG~l~~~gR~~d~i 435 (435)
.+|++|+|++.||++|+|
T Consensus 458 ~~d~~g~L~i~gRkK~~i 475 (613)
T COG1022 458 ELDEDGYLVITGRKKELI 475 (613)
T ss_pred EEcCCCcEEEeecccceE
Confidence 999999999999999986
No 4
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.5e-62 Score=494.12 Aligned_cols=408 Identities=20% Similarity=0.306 Sum_probs=322.9
Q ss_pred hHHHHHHHhcccCCCeeEEEeC-----CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCC--------
Q 013869 2 EVFKAAYKKGSMARDSVAIRAD-----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG-------- 68 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~-----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g-------- 68 (435)
||.++|.++++++|+++|++.. .+.+||+|+.+++.++|++|.+.. .+|+++|
T Consensus 62 ~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~--------------~~Gv~~g~~~~~~~~ 127 (746)
T PTZ00342 62 HIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYE--------------GKGIPEKKYNEEQNN 127 (746)
T ss_pred hHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHh--------------hcCCCcCcccccccc
Confidence 6889999999999999999962 368999999999999999999720 0288888
Q ss_pred ---CeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC--ccccC
Q 013869 69 ---ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLI 143 (435)
Q Consensus 69 ---~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~ 143 (435)
|+|+|+++|+++|+++++||+++|+++||+++.++.+++.++|+.+++++|+++.+..+.+.......+. .+..+
T Consensus 128 g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~ 207 (746)
T PTZ00342 128 GKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIIL 207 (746)
T ss_pred ccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEE
Confidence 9999999999999999999999999999999999999999999999999999998887776665444332 12222
Q ss_pred CCCCCC------------------CCc--c--------------------------------cc---c----------cc
Q 013869 144 PPVPNV------------------SSE--T--------------------------------TV---F----------DQ 158 (435)
Q Consensus 144 ~~~~~~------------------~~~--~--------------------------------~~---~----------~~ 158 (435)
...... ... . .. . +.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 287 (746)
T PTZ00342 208 DTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDD 287 (746)
T ss_pred CCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHH
Confidence 111000 000 0 00 0 00
Q ss_pred h-----hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc--cCCCCCeeEEeecchhhhHHHHHHH
Q 013869 159 S-----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW--EYTSADQFLHCLPLHHVHGLFNALL 231 (435)
Q Consensus 159 ~-----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~l~~~pl~~~~g~~~~~~ 231 (435)
. .........++++++|+|||||||.||||++||+++++.+....... .....+++++++|++|.+++.. .+
T Consensus 288 ~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~-~~ 366 (746)
T PTZ00342 288 MTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVI-AY 366 (746)
T ss_pred HHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHH-HH
Confidence 0 00012245679999999999999999999999999998877654432 2335689999999999999874 77
Q ss_pred HHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccc----cHH--------------
Q 013869 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM----DTE-------------- 293 (435)
Q Consensus 232 ~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----~~~-------------- 293 (435)
.++..|+++++.+. ++..+++. +.+++||++.++|.+|..|.+..... +..
T Consensus 367 ~~l~~G~~i~~~~~-~~~~l~~d----------i~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~ 435 (746)
T PTZ00342 367 LSFMLGGTINIWSK-DINYFSKD----------IYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKS 435 (746)
T ss_pred HHHHcCCEEEEeCC-CHHHHHHH----------HHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 78999999999875 77777777 56699999999999999998642110 100
Q ss_pred ----------------HHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCCCCCCCcc
Q 013869 294 ----------------LQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTV 357 (435)
Q Consensus 294 ----------------~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~ 357 (435)
..+......+++|.+++||+++++++.+.|+..+++++++.||+||+++.++.........+++
T Consensus 436 ~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~~~~~gsv 515 (746)
T PTZ00342 436 NNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHADDNNTESI 515 (746)
T ss_pred hhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCCCCCcccc
Confidence 0011112237999999999999999999999999999999999999976555433344567899
Q ss_pred ceec-CCCeEEEecCCC-CCCC-CccceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccC
Q 013869 358 GNPL-PGVQVKIAEDES-GSDA-AGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIY 434 (435)
Q Consensus 358 G~p~-~~~~~~i~d~~~-~~~~-~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~ 434 (435)
|+|+ |+++++++|.++ .... ...|||+++||+++.||+++|+.|++.|+++|||+|||+|++|+||+|+|.||++|+
T Consensus 516 G~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdl 595 (746)
T PTZ00342 516 GGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGL 595 (746)
T ss_pred cCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCe
Confidence 9998 999999998432 2222 236999999999999999999999999998999999999999999999999999998
Q ss_pred C
Q 013869 435 F 435 (435)
Q Consensus 435 i 435 (435)
|
T Consensus 596 I 596 (746)
T PTZ00342 596 V 596 (746)
T ss_pred E
Confidence 6
No 5
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=4.2e-62 Score=439.43 Aligned_cols=399 Identities=22% Similarity=0.324 Sum_probs=340.0
Q ss_pred hHHHHHHHhcccCCCeeEEEe--CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH
Q 013869 2 EVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~ 79 (435)
|+.+++...+++.||+.|++. ++..+||+|+.+.++.+|+.|.. +|+++||+|+++.||+.
T Consensus 51 Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~-----------------lGL~kGDrVgvwgpN~~ 113 (596)
T KOG1177|consen 51 TIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLS-----------------LGLKKGDRVGVWGPNSY 113 (596)
T ss_pred cHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHh-----------------hcCCCCCEEEEecCChH
Confidence 678899999999999999997 56789999999999999999999 59999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech-----hhHHHHHHHHhccCC----ccc--cCCC---
Q 013869 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE-----DYREVLQNVASKSGA----KFS--LIPP--- 145 (435)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~-----~~~~~~~~~~~~~~~----~~~--~~~~--- 145 (435)
+|+.+.|||.++|.+.+++||.+..+++.+.|++.+++++|..+ .++..+.++..+... .+. .++.
T Consensus 114 ~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lth 193 (596)
T KOG1177|consen 114 EWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTH 193 (596)
T ss_pred HHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceE
Confidence 99999999999999999999999999999999999999999987 345556655544221 110 0000
Q ss_pred ----CCCCCC-ccccc-------cchh----hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCC
Q 013869 146 ----VPNVSS-ETTVF-------DQSQ----AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT 209 (435)
Q Consensus 146 ----~~~~~~-~~~~~-------~~~~----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~ 209 (435)
.++.+. ..... .... ..-.....+++.+-|.|||||||.|||+.+||.+++++........++.
T Consensus 194 vi~~~ed~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~ 273 (596)
T KOG1177|consen 194 VILADEDHPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYN 273 (596)
T ss_pred EEecCCCCcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcC
Confidence 000000 00000 0000 0112356789999999999999999999999999999999999999999
Q ss_pred CCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc-CCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhc
Q 013869 210 SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM-PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (435)
Q Consensus 210 ~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 288 (435)
..+++++..|++|..|.....++++..|++++++ +.|++.+.+.+ |+++++|.++++|+++..|++.
T Consensus 274 e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqa----------i~~ekcT~l~gtPtM~~Dlln~-- 341 (596)
T KOG1177|consen 274 EKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQA----------ISNEKCTTLYGTPTMFVDLLNI-- 341 (596)
T ss_pred cceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHH----------HHhhceEEEecChHHHHHHhcc--
Confidence 9999999999999999888999999999999996 57999999999 7779999999999999999986
Q ss_pred cccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCC-cccccccCccccchhccCCCCC---CCCCccceecCCC
Q 013869 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLRGA---RKAGTVGNPLPGV 364 (435)
Q Consensus 289 ~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~-~l~~~YG~tE~~~~~~~~~~~~---~~~~~~G~p~~~~ 364 (435)
+.....+++++|..+.||+++++++.+.+...... .+...||+||++.+.+...... ...-++|+..++.
T Consensus 342 ------~~~~~~~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~ 415 (596)
T KOG1177|consen 342 ------PQKQQVDLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHY 415 (596)
T ss_pred ------hhhccCchhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccc
Confidence 34456688999999999999999999999987655 4778999999997776544332 3456899999999
Q ss_pred eEEEecCCCCCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 365 QVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 365 ~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+..|+|.+|...+-+ -||||+||.+.+.|||++++.|++...+|.||+|||+|.||++|.+++.||.+|+|
T Consensus 416 Ea~iv~~~g~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI 487 (596)
T KOG1177|consen 416 EAAIVDKDGSEVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMI 487 (596)
T ss_pred ccccccCCCCccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeE
Confidence 999999999998888 59999999999999999999999999999999999999999999999999999997
No 6
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.1e-61 Score=490.56 Aligned_cols=405 Identities=26% Similarity=0.332 Sum_probs=325.8
Q ss_pred hHHHHHHHhcccCCCeeEEEe----C-----CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 013869 2 EVFKAAYKKGSMARDSVAIRA----D-----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~----~-----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (435)
++.+.|.++++++|+++|+.. + .+.+||+||.++++++|++|++ +|+++||+|+
T Consensus 45 tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~-----------------~Gv~~gd~Va 107 (651)
T PLN02736 45 TLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQ-----------------HGIPKGACVG 107 (651)
T ss_pred CHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEE
Confidence 678999999999999999942 2 1469999999999999999999 4999999999
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCcc--ccCCCCCC-C
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKF--SLIPPVPN-V 149 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~ 149 (435)
|+++|+++++++++||+++|++++|+++.++.+++.++++.++++++|++.+..+.+.......+... ..+..... .
T Consensus 108 i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~ 187 (651)
T PLN02736 108 LYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPL 187 (651)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhh
Confidence 99999999999999999999999999999999999999999999999999888776665544333211 11110000 0
Q ss_pred ---CC-----ccccccch-----hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEE
Q 013869 150 ---SS-----ETTVFDQS-----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLH 216 (435)
Q Consensus 150 ---~~-----~~~~~~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~ 216 (435)
.. .....+.. .........++++++|+|||||||.||||.+||+++..++......+++.+.|++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~ 267 (651)
T PLN02736 188 PSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHIS 267 (651)
T ss_pred hhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEE
Confidence 00 00000000 001122346799999999999999999999999999999998888888999999999
Q ss_pred eecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccH----
Q 013869 217 CLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDT---- 292 (435)
Q Consensus 217 ~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~---- 292 (435)
.+|++|.++++ .++.++..|+++++.+. ++..+++. ++++++|+++++|.+++.+.+.....-.
T Consensus 268 ~lPl~h~~~~~-~~~~~l~~G~~i~~~~~-~~~~~~~~----------i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~ 335 (651)
T PLN02736 268 YLPLAHIYERV-NQIVMLHYGVAVGFYQG-DNLKLMDD----------LAALRPTIFCSVPRLYNRIYDGITNAVKESGG 335 (651)
T ss_pred eCCHHHHHHHH-HHHHHHHcCCEEEEeCC-CHHHHHHH----------HHHhCCcEEecchHHHHHHHHHHHHHHhcccH
Confidence 99999999987 58889999999998775 66677777 6669999999999999998775321000
Q ss_pred -------------------------H-----HHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccc
Q 013869 293 -------------------------E-----LQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVM 342 (435)
Q Consensus 293 -------------------------~-----~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~ 342 (435)
. ..+......+++|.+++||+++++++.+.+.+.+++++++.||+||+++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~ 415 (651)
T PLN02736 336 LKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSC 415 (651)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhch
Confidence 0 0000011115899999999999999999999999999999999999987
Q ss_pred hhccCCCCCCCCCccceecCCCeEEEecCCC-C----CCCCccceEEEecCCccccccCCchhcccccccCCccccCceE
Q 013869 343 AISNPLRGARKAGTVGNPLPGVQVKIAEDES-G----SDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTG 417 (435)
Q Consensus 343 ~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~-~----~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g 417 (435)
.++.........+++|+|+|+++++|+|.++ . ..+...|||+++||+++.||+++++.+++.|+++|||+|||+|
T Consensus 416 ~~~~~~~~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg 495 (651)
T PLN02736 416 VISGMDEGDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIG 495 (651)
T ss_pred heeccCCCCCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceE
Confidence 6654443445678999999999999998432 1 1222369999999999999999999999999889999999999
Q ss_pred EEcCCccEEEecccccCC
Q 013869 418 KQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 418 ~~~~dG~l~~~gR~~d~i 435 (435)
++|+||+|+|.||+||+|
T Consensus 496 ~~d~dG~l~i~GR~kd~i 513 (651)
T PLN02736 496 LWLPGGRLKIIDRKKNIF 513 (651)
T ss_pred EEcCCCcEEEEEechhhe
Confidence 999999999999999986
No 7
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.6e-60 Score=485.09 Aligned_cols=403 Identities=23% Similarity=0.316 Sum_probs=311.6
Q ss_pred hHHHHHHHhcccCCCeeEEEeC----C-----cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 013869 2 EVFKAAYKKGSMARDSVAIRAD----Q-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~----~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (435)
|+.+.|.++++++||++|++.. + +.+||+||.++++++|++|++ +|+++||+|+
T Consensus 46 t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~Gd~Va 108 (666)
T PLN02614 46 SCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRS-----------------VGVKDEAKCG 108 (666)
T ss_pred cHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 7889999999999999999831 1 358999999999999999999 4999999999
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccC---CccccCCCCCCC
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG---AKFSLIPPVPNV 149 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 149 (435)
|+++|+++|++++|||+++|+++||+++.++.+++.++++.++++++|++.+..+.+........ ..+..+......
T Consensus 109 i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~ 188 (666)
T PLN02614 109 IYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSRE 188 (666)
T ss_pred EEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChH
Confidence 99999999999999999999999999999999999999999999999999876554433222110 111111110000
Q ss_pred -------CC--ccccccc----h-hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc-----cCCC
Q 013869 150 -------SS--ETTVFDQ----S-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW-----EYTS 210 (435)
Q Consensus 150 -------~~--~~~~~~~----~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-----~~~~ 210 (435)
.. .....+. . .........++|+++|+|||||||.||||.+||+++...+......+ ++.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~ 268 (666)
T PLN02614 189 QKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTV 268 (666)
T ss_pred HhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCC
Confidence 00 0000000 0 00111234579999999999999999999999999988877655443 5678
Q ss_pred CCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccc
Q 013869 211 ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (435)
Q Consensus 211 ~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 290 (435)
+|++++++|++|.++... ++.++..|+++++.+ +++..+++. +++++||++.++|.++..+++.....
T Consensus 269 ~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~----------i~~~~~T~~~~vP~~~~~l~~~~~~~ 336 (666)
T PLN02614 269 KDVYLSYLPLAHIFDRVI-EECFIQHGAAIGFWR-GDVKLLIED----------LGELKPTIFCAVPRVLDRVYSGLQKK 336 (666)
T ss_pred CcEEEEeccHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHH----------HHHhCCeEEEecHHHHHHHHHHHHHH
Confidence 999999999999998864 666788999998875 577777777 66699999999999999988643210
Q ss_pred cH----------------H---------------H-----HHHhhhhc-cccEEEEecCCCCCHHHHHHHHHHh-CCccc
Q 013869 291 DT----------------E---------------L-----QAASASAA-KQLRLMMCGSSALPLPVMQQWETIT-GHRLL 332 (435)
Q Consensus 291 ~~----------------~---------------~-----~~~~~~~l-~~lr~i~~~G~~l~~~l~~~~~~~~-~~~l~ 332 (435)
.. . . .+.....+ +++|.+++||+++++.+ ++|.+.+ +++++
T Consensus 337 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~ 415 (666)
T PLN02614 337 LSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVL 415 (666)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEE
Confidence 00 0 0 00000112 68999999999999875 5677766 58999
Q ss_pred ccccCccccchhccC-CCCCCCCCccceecCCCeEEEec-CCC--CCCCCc-cceEEEecCCccccccCCchhccccccc
Q 013869 333 ERYGMTEFVMAISNP-LRGARKAGTVGNPLPGVQVKIAE-DES--GSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTA 407 (435)
Q Consensus 333 ~~YG~tE~~~~~~~~-~~~~~~~~~~G~p~~~~~~~i~d-~~~--~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 407 (435)
+.||+||+++.++.. .......+++|+|+||++++|+| +++ ..++.+ .|||+++|++++.||+++|+.|.+.|.
T Consensus 416 ~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~- 494 (666)
T PLN02614 416 QGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVLI- 494 (666)
T ss_pred eeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhhc-
Confidence 999999987544422 22223467999999999999998 332 444444 799999999999999999999999995
Q ss_pred CCccccCceEEEcCCccEEEecccccCC
Q 013869 408 DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 408 ~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+|||+|||+|++|+||+|+|+||+||+|
T Consensus 495 dGw~~TGDlg~~d~dG~l~i~gR~kd~i 522 (666)
T PLN02614 495 DGWLHTGDVGEWQPNGSMKIIDRKKNIF 522 (666)
T ss_pred cCCcccceEEEEcCCCCEEEEEcchhce
Confidence 8999999999999999999999999987
No 8
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=5.1e-61 Score=466.38 Aligned_cols=396 Identities=32% Similarity=0.516 Sum_probs=315.3
Q ss_pred HHHhcccCCCeeEEEe-CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHH
Q 013869 7 AYKKGSMARDSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (435)
Q Consensus 7 ~~~~~~~~p~~~al~~-~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~ 85 (435)
|.++|+++||++|+++ .++++||+||+++++++|..|++ +|+++|++|+++++|++++++++
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~-----------------~g~~~~~~V~i~~~n~~~~~~~~ 63 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRK-----------------LGVKKGDRVAILLPNSIEFVVAF 63 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHH-----------------TTSSTTSEEEEEESSSHHHHHHH
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHH-----------------hCCCccccccccCCccceeeeee
Confidence 6889999999999999 99999999999999999999998 59999999999999999999999
Q ss_pred HHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEe----chhhHHHHHHHHhccCC-c-cccCCCCCCCCCccccccch
Q 013869 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLS----TEDYREVLQNVASKSGA-K-FSLIPPVPNVSSETTVFDQS 159 (435)
Q Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~----~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 159 (435)
+||+++|++++|++|.++.+++.++++.++++++|+ +......+......... . ...+................
T Consensus 64 ~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (417)
T PF00501_consen 64 LACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASL 143 (417)
T ss_dssp HHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999997 22222223333222111 1 11111111111100000000
Q ss_pred hhhhccC-CCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHH--HhccCCCCCeeEEeecchhhhHHHHHHHHHHHc
Q 013869 160 QAEKMDG-QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT--EAWEYTSADQFLHCLPLHHVHGLFNALLAPLYA 236 (435)
Q Consensus 160 ~~~~~~~-~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~--~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~ 236 (435)
....... ..++++++++|||||||.||+|.++|+++++.+..+. ...+++ +++++.+|++|..|++..++.++..
T Consensus 144 ~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~ 221 (417)
T PF00501_consen 144 SDEPQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFS 221 (417)
T ss_dssp CHCSHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHC
T ss_pred ccccccCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccccccccc
Confidence 0000000 1569999999999999999999999999999888864 222333 6999999999999996679999999
Q ss_pred CCEEEEcCCcch---hHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCC
Q 013869 237 GATVEFMPKFSV---RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (435)
Q Consensus 237 G~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~ 313 (435)
|+++++++.... ..+++. ++++++|++.++|.++..+++..+. .. .....+++++|.++++|+
T Consensus 222 G~~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~l~~l~~~~~~-~~---~~~~~~l~~lr~v~~~G~ 287 (417)
T PF00501_consen 222 GATLVLPSPFDLFDPESLLEL----------ISRYKPTILFAVPSMLEALLQSPEE-KT---KISKKDLSSLRTVISGGE 287 (417)
T ss_dssp TSEEEEESSHHHHHHHHHHHH----------HHHHTESEEEEEHHHHHHHHHHHHT-TH---HGTTTTGTT-SEEEEESS
T ss_pred cccccccccccccccccchhc----------ccccccccccccccccccccccccc-cc---cccccccccccccccccc
Confidence 999999998765 334455 6779999999999999999873211 10 112347888999999999
Q ss_pred CCCHHHHHHHHHHhCC-cccccccCccccchhccC--CCCCCCCCccceecCCCeEEEecCC-CCCCCCc-cceEEEecC
Q 013869 314 ALPLPVMQQWETITGH-RLLERYGMTEFVMAISNP--LRGARKAGTVGNPLPGVQVKIAEDE-SGSDAAG-VGEICVKSP 388 (435)
Q Consensus 314 ~l~~~l~~~~~~~~~~-~l~~~YG~tE~~~~~~~~--~~~~~~~~~~G~p~~~~~~~i~d~~-~~~~~~~-~Gel~v~~~ 388 (435)
++++++.+++++.++. ++++.||+||++.+++.. .....+.+++|+|+++++++|+|++ ++..+.+ .|||+++|+
T Consensus 288 ~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~ 367 (417)
T PF00501_consen 288 PLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGP 367 (417)
T ss_dssp T-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEEST
T ss_pred cCChhhccccccccccccceecccccccceeeecccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 9999999999999987 999999999999887744 3333577889999999999999987 6666555 799999999
Q ss_pred CccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 389 SLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 389 ~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
.++.||+++++.+.+.|+++|||+|||+|++|+||+++++||+||+|
T Consensus 368 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i 414 (417)
T PF00501_consen 368 NVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMI 414 (417)
T ss_dssp TSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEE
T ss_pred ccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEE
Confidence 99999999999999999866899999999999999999999999986
No 9
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=8.3e-60 Score=451.45 Aligned_cols=393 Identities=25% Similarity=0.371 Sum_probs=320.0
Q ss_pred HHHHHhccc-CCCeeEEEeCC-----cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC
Q 013869 5 KAAYKKGSM-ARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (435)
Q Consensus 5 ~~~~~~~~~-~p~~~al~~~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~ 78 (435)
++++++... .+|+.|++..+ +.+||+||++.++++|+.|++. .|+ +||+|+|++|+.
T Consensus 13 n~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~----------------~gv-kGDrV~iymp~~ 75 (528)
T COG0365 13 NALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDL----------------GGV-KGDRVAIYMPNS 75 (528)
T ss_pred hhhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHh----------------CCC-CCCEEEEEcCCC
Confidence 457777653 57899999853 6799999999999999999975 478 999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHh-----ccCCccccCCCCCCCCCcc
Q 013869 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS-----KSGAKFSLIPPVPNVSSET 153 (435)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 153 (435)
+++++++|||+++|++.+|+.+.++++.+...++.++++++|+++........... .....+..+.... .....
T Consensus 76 pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~-~~~~~ 154 (528)
T COG0365 76 PEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG-LWYDE 154 (528)
T ss_pred HHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc-ccHHH
Confidence 99999999999999999999999999999999999999999999866654332111 0000011111111 11111
Q ss_pred ccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHH-HhccCCCCCeeEEeecchhhhHHHHHHHH
Q 013869 154 TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT-EAWEYTSADQFLHCLPLHHVHGLFNALLA 232 (435)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~l~~~pl~~~~g~~~~~~~ 232 (435)
.........+......+|+++++|||||||.||||.++|..++....... ..+.+.++|++++..++.|.+|.+..+++
T Consensus 155 ~~~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~ 234 (528)
T COG0365 155 AVEKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFS 234 (528)
T ss_pred HhhccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHH
Confidence 11111111223347889999999999999999999999997666555544 46678899999999999999999999999
Q ss_pred HHHcCCEEEEcCCc---chhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEE
Q 013869 233 PLYAGATVEFMPKF---SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (435)
Q Consensus 233 ~l~~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~ 309 (435)
+|.+|+++++.+.. ++..+++. +++|++|.++..|+.++.|.+.-. ....++|+||.+.
T Consensus 235 pL~~Gat~~~~eg~p~~~~~~~~~~----------ie~~~vt~~~tsPT~~R~l~~~g~--------~~~~dlssLr~~~ 296 (528)
T COG0365 235 PLASGATTVLYDGRPFYSPERLWEA----------LEKYKVTIFGTSPTFLRRLMKLGL--------GEPYDLSSLRVLG 296 (528)
T ss_pred HHhcCCeEEEeCCCCCCCHHHHHHH----------HHHhCCceEeeCHHHHHHHHhcCC--------cccccchhheeee
Confidence 99999999988642 36777777 777999999999999999987522 3456899999999
Q ss_pred ecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCccceEEEecC-
Q 013869 310 CGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSP- 388 (435)
Q Consensus 310 ~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~~Gel~v~~~- 388 (435)
+.||+++++.++.+.+.+++++.+.||+||+|++...+.. ..++++.|+|+||+++.++|++|+.++++.|+|+++.+
T Consensus 297 SaGEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~~~~~~~~-~~~~g~~g~p~pG~~~~vvdd~g~~~~~~~G~Lvi~~~~ 375 (528)
T COG0365 297 SAGEPLNPEAFEWFYSALGVWILDIYGQTETGMGFIAGRP-PVKNGSSGLPLPGYAVRRVDDEGNPVPPGVGELVVRLPW 375 (528)
T ss_pred ccCCCCCHHHHHHHHHHhCCCEeccccccccCccccCCCC-CcCCCCCCCCCCCceeEEECCCCCcCCCCceEEEEeCCC
Confidence 9999999999999999999999999999999955443333 33445559999999999999998888766699999987
Q ss_pred -CccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 389 -SLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 389 -~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
.++++||+|++...+.+.+. ||.|||.+++|+||++||+||.||+|
T Consensus 376 p~~~~~~w~d~er~~~~y~~~-~y~tGD~~~~DedGy~~i~GR~DDvI 422 (528)
T COG0365 376 PGMALTYWNDPERYKEAYFGR-WYRTGDWAERDEDGYFWLHGRSDDVI 422 (528)
T ss_pred chhhhhhhCCHHHHHHHHhhc-eeecCceeEEccCCCEEEEeeccceE
Confidence 89999999999999998654 99999999999999999999999987
No 10
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.1e-59 Score=479.30 Aligned_cols=403 Identities=24% Similarity=0.337 Sum_probs=311.5
Q ss_pred hHHHHHHHhcccCCCeeEEEe----C-----CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 013869 2 EVFKAAYKKGSMARDSVAIRA----D-----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~----~-----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (435)
|+.+.|.+.++++|+++|+.. . .+++||+||.++++++|++|.+ +|+++||+|+
T Consensus 44 t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~gd~Va 106 (660)
T PLN02861 44 SPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRS-----------------RGVNPGDRCG 106 (660)
T ss_pred CHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 678999999999999999963 1 1479999999999999999999 4999999999
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC---ccccCCCCCCC
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA---KFSLIPPVPNV 149 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 149 (435)
|+++|+++|++++|||+++|+++||+++.++.+++.++++.++++++|++.+..+.+.......+. .+..+......
T Consensus 107 i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~ 186 (660)
T PLN02861 107 IYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSE 186 (660)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChh
Confidence 999999999999999999999999999999999999999999999999998776655443332211 11111110000
Q ss_pred -------CCc--cccccc----hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhcc-----CCCC
Q 013869 150 -------SSE--TTVFDQ----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE-----YTSA 211 (435)
Q Consensus 150 -------~~~--~~~~~~----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-----~~~~ 211 (435)
... ....+. ..........++++++|+|||||||.||||.+||++++..+......++ +.+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~ 266 (660)
T PLN02861 187 QKEEAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEE 266 (660)
T ss_pred hhhhhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCC
Confidence 000 000000 0001122346799999999999999999999999999988777655443 4678
Q ss_pred CeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccc-
Q 013869 212 DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM- 290 (435)
Q Consensus 212 ~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~- 290 (435)
|++++.+|++|.+++.. .+.++..|+++++.+ +++..+++. +++++||++.++|.++..+.+.....
T Consensus 267 d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~----------i~~~~~T~~~~vP~~~~~l~~~~~~~~ 334 (660)
T PLN02861 267 DSYFSYLPLAHVYDQVI-ETYCISKGASIGFWQ-GDIRYLMED----------VQALKPTIFCGVPRVYDRIYTGIMQKI 334 (660)
T ss_pred CEEEEECcHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHH----------HHHhCCcEEeechHHHHHHHHHHHHHH
Confidence 99999999999999875 556899999998874 577777777 66699999999999999987532100
Q ss_pred -------------------------------cHHHHHH----hhhhc-cccEEEEecCCCCCHHHHHHHHHHhCC-cccc
Q 013869 291 -------------------------------DTELQAA----SASAA-KQLRLMMCGSSALPLPVMQQWETITGH-RLLE 333 (435)
Q Consensus 291 -------------------------------~~~~~~~----~~~~l-~~lr~i~~~G~~l~~~l~~~~~~~~~~-~l~~ 333 (435)
....... .+..+ +++|.+++||+++++++. +|.+.++. .+++
T Consensus 335 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~ 413 (660)
T PLN02861 335 SSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQ 413 (660)
T ss_pred hccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeE
Confidence 0000000 00112 689999999999999975 56676764 7999
Q ss_pred cccCccccchhccC-CCCCCCCCccceecCCCeEEEec--CCCCC-CCC-ccceEEEecCCccccccCCchhcccccccC
Q 013869 334 RYGMTEFVMAISNP-LRGARKAGTVGNPLPGVQVKIAE--DESGS-DAA-GVGEICVKSPSLFKEYWKLPKVTKDSFTAD 408 (435)
Q Consensus 334 ~YG~tE~~~~~~~~-~~~~~~~~~~G~p~~~~~~~i~d--~~~~~-~~~-~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 408 (435)
.||+||+++.++.. .......+++|+|+++++++|+| +++.. ... ..|||+++|++++.||+++|+.|.+.|+ +
T Consensus 414 ~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~-d 492 (660)
T PLN02861 414 GYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLI-D 492 (660)
T ss_pred ecchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhhh-c
Confidence 99999987654432 22223467999999999999998 33322 222 3699999999999999999999999995 8
Q ss_pred CccccCceEEEcCCccEEEecccccCC
Q 013869 409 GFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 409 g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|||+|||+|++|+||+|+|.||+||+|
T Consensus 493 Gw~~TGDlg~~d~dG~l~i~GR~kd~I 519 (660)
T PLN02861 493 GWFHTGDIGEWQPNGAMKIIDRKKNIF 519 (660)
T ss_pred cCcccCceEEECCCCcEEEEeccccce
Confidence 999999999999999999999999987
No 11
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.1e-59 Score=476.45 Aligned_cols=409 Identities=23% Similarity=0.353 Sum_probs=314.7
Q ss_pred hHHHHHHHhcccCCCeeEEEeC---------------------------CcccCHHHHHHHHHHHHHHHhhCCCCCcccc
Q 013869 2 EVFKAAYKKGSMARDSVAIRAD---------------------------QKSYSYDQLASSALRISSLLCSNDLKTTSEK 54 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~---------------------------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~ 54 (435)
|+++.|.++++++||++|+... .+.+||+||.++++++|+.|.+
T Consensus 70 t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~--------- 140 (700)
T PTZ00216 70 NFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAE--------- 140 (700)
T ss_pred CHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHH---------
Confidence 6889999999999999999862 4789999999999999999999
Q ss_pred ccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHh
Q 013869 55 TKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS 134 (435)
Q Consensus 55 ~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 134 (435)
+|+++||+|+|+++|+++|+++++||+++|++++|+++.++.+++.++++.+++++++++....+.+.....
T Consensus 141 --------~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~ 212 (700)
T PTZ00216 141 --------LGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMK 212 (700)
T ss_pred --------hCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhh
Confidence 499999999999999999999999999999999999999999999999999999999999876655443322
Q ss_pred c--cC-CccccCCCCCCCCCcc-----cc------c--cchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHH
Q 013869 135 K--SG-AKFSLIPPVPNVSSET-----TV------F--DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQ 198 (435)
Q Consensus 135 ~--~~-~~~~~~~~~~~~~~~~-----~~------~--~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~ 198 (435)
. .+ ..+..+.......... .. . .....+......++++++++|||||||.||||.+||+++.+.
T Consensus 213 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~ 292 (700)
T PTZ00216 213 SGGMPNTTIIYLDSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAG 292 (700)
T ss_pred hccCCceEEEEECCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHH
Confidence 1 11 1122111111000000 00 0 000111123446799999999999999999999999999988
Q ss_pred HHHHHHhc-----cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCcccccccee
Q 013869 199 VQMLTEAW-----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAF 273 (435)
Q Consensus 199 ~~~~~~~~-----~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 273 (435)
+......+ .+.+.+++++++|++|.+++.. ....+..|+++++.+ +..+.+.+.. ....+.++++|++
T Consensus 293 ~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~~---~~~l~~~~~~---~~~~l~~~~pT~~ 365 (700)
T PTZ00216 293 ILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFGS---PRTLTDTFAR---PHGDLTEFRPVFL 365 (700)
T ss_pred HHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEECC---HHHhhhhhcc---ccchHHHcCCcEE
Confidence 87765543 2367899999999999998764 555678888887743 3333332111 0011677999999
Q ss_pred ccccHHHHHHHhhhccccHHH---------------------------------HHHhhhhccccEEEEecCCCCCHHHH
Q 013869 274 TGVPTMYTRLIQGYEAMDTEL---------------------------------QAASASAAKQLRLMMCGSSALPLPVM 320 (435)
Q Consensus 274 ~~~P~~~~~l~~~~~~~~~~~---------------------------------~~~~~~~l~~lr~i~~~G~~l~~~l~ 320 (435)
.++|.+++.+.+......... .+......+++|.+++||+++++++.
T Consensus 366 ~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~ 445 (700)
T PTZ00216 366 IGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQ 445 (700)
T ss_pred EechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH
Confidence 999999999876532110000 00001112689999999999999999
Q ss_pred HHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCC--CC-CccceEEEecCCccccccCC
Q 013869 321 QQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGS--DA-AGVGEICVKSPSLFKEYWKL 397 (435)
Q Consensus 321 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~--~~-~~~Gel~v~~~~~~~gy~~~ 397 (435)
+.++..++ ++++.||+||+++.++.........+++|+|++|++++|+|+++.. .. ...|||+++|++++.||+++
T Consensus 446 ~~~~~~~~-~l~~~YG~TEt~~~~~~~~~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~ 524 (700)
T PTZ00216 446 EFVNVVFG-MVIQGWGLTETVCCGGIQRTGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQ 524 (700)
T ss_pred HHHHHHhh-hHhhccCcccccccccccCCCCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCC
Confidence 88887778 9999999999976655433334567899999999999999976532 22 23699999999999999999
Q ss_pred chhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 398 PKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 398 ~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|+.|++.|+.+|||+|||+|++|+||+|+|.||+||+|
T Consensus 525 pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~i 562 (700)
T PTZ00216 525 EELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALA 562 (700)
T ss_pred hhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhhe
Confidence 99999999989999999999999999999999999986
No 12
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.3e-58 Score=460.45 Aligned_cols=396 Identities=21% Similarity=0.263 Sum_probs=321.9
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC-cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQ-KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~-~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
++.+.|.+.++++|+++|+++.. +++||+||.++++++|++|.+ .+||+|+++++|+++
T Consensus 20 ~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~--------------------~~gd~Val~~~n~~e 79 (539)
T PRK06334 20 TVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK--------------------YPDQHIGIMMPASAG 79 (539)
T ss_pred cHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh--------------------ccCCeEEEEcCCchH
Confidence 67899999999999999998765 799999999999999999976 369999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhc---cCCccccCCCCCC-CCCcccc-
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK---SGAKFSLIPPVPN-VSSETTV- 155 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~- 155 (435)
+++++|||+++|++++|+++.++.+++.++++.+++++++++.+....+...... .+..+..+..... .......
T Consensus 80 ~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 159 (539)
T PRK06334 80 AYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCR 159 (539)
T ss_pred HHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhh
Confidence 9999999999999999999999999999999999999999998877665543321 1111111111000 0000000
Q ss_pred -c---c-ch----hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHH
Q 013869 156 -F---D-QS----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGL 226 (435)
Q Consensus 156 -~---~-~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~ 226 (435)
. . .. .........++++++++|||||||.||+|.+||+++..+.......+++..+|++++.+|++|.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~ 239 (539)
T PRK06334 160 IGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGF 239 (539)
T ss_pred hhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhh
Confidence 0 0 00 0001124567999999999999999999999999999888887788888999999999999999998
Q ss_pred HHHHHHHHHcCCEEEEcC-CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhcccc
Q 013869 227 FNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQL 305 (435)
Q Consensus 227 ~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~l 305 (435)
...++.++..|+++++.+ .+++..+++. |+++++|++.++|+++..|++... .....++++
T Consensus 240 ~~~~~~~l~~G~~vv~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~l 301 (539)
T PRK06334 240 NSCTLFPLLSGVPVVFAYNPLYPKKIVEM----------IDEAKVTFLGSTPVFFDYILKTAK--------KQESCLPSL 301 (539)
T ss_pred HHHHHHHHHcCCeEEEecCCCCHHHHHHH----------HHHhCCcEEEecHHHHHHHHHhhh--------hcccccccc
Confidence 767889999999999875 5788888887 666999999999999999987532 223467899
Q ss_pred EEEEecCCCCCHHHHHHHHHHh-CCcccccccCccccchhccCC-CCCCCCCccceecCCCeEEEecCC-CCCCCCc-cc
Q 013869 306 RLMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKIAEDE-SGSDAAG-VG 381 (435)
Q Consensus 306 r~i~~~G~~l~~~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~-~~~~~~~~~G~p~~~~~~~i~d~~-~~~~~~~-~G 381 (435)
|.+++||+++++++.++|.+.+ ++.+++.||+||++.+++... .......++|+|+++++++|+|++ +..++.+ .|
T Consensus 302 r~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~G 381 (539)
T PRK06334 302 RFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETG 381 (539)
T ss_pred cEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCCCCccCCCCceE
Confidence 9999999999999999999998 689999999999986655332 222345679999999999999964 5556655 79
Q ss_pred eEEEecCCccccccCCchhccccc-ccCCccccCceEEEcCCccEEEecccccCC
Q 013869 382 EICVKSPSLFKEYWKLPKVTKDSF-TADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 382 el~v~~~~~~~gy~~~~~~~~~~~-~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
||+++|++++.||+++++.+.... .++|||+|||+|++|+||++++.||.+|+|
T Consensus 382 el~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~i 436 (539)
T PRK06334 382 LVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFV 436 (539)
T ss_pred EEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeE
Confidence 999999999999999998654322 346899999999999999999999999986
No 13
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.3e-58 Score=473.49 Aligned_cols=414 Identities=23% Similarity=0.318 Sum_probs=314.4
Q ss_pred hHHHHHHHhcccCCCeeEEEe------------CC-----------cccCHHHHHHHHHHHHHHHhhCCCCCcccccccc
Q 013869 2 EVFKAAYKKGSMARDSVAIRA------------DQ-----------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNE 58 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~------------~~-----------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~ 58 (435)
|+.++|.+.++++||++|+.. ++ +.+||+|+.++++++|++|.+
T Consensus 59 t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~------------- 125 (696)
T PLN02387 59 TLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVA------------- 125 (696)
T ss_pred CHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHH-------------
Confidence 678999999999999999942 12 238999999999999999999
Q ss_pred ccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC
Q 013869 59 NSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA 138 (435)
Q Consensus 59 ~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~ 138 (435)
+|+++||+|+|+++|+++|+++++||+++|+++||+++.++.+++.++|+.++++++|++.+..+.+.......+.
T Consensus 126 ----lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~ 201 (696)
T PLN02387 126 ----LGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLET 201 (696)
T ss_pred ----hCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCC
Confidence 5999999999999999999999999999999999999999999999999999999999998887776665443332
Q ss_pred c--cccCCCCCCCCC-------cc---cccc-----chhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHH
Q 013869 139 K--FSLIPPVPNVSS-------ET---TVFD-----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM 201 (435)
Q Consensus 139 ~--~~~~~~~~~~~~-------~~---~~~~-----~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~ 201 (435)
. +..+........ .. ...+ ...........++|+++|+|||||||.||||.+||+++..++..
T Consensus 202 l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~ 281 (696)
T PLN02387 202 VKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAG 281 (696)
T ss_pred ceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHH
Confidence 1 111111100000 00 0000 00001122346799999999999999999999999999988887
Q ss_pred HHHhc-cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHH
Q 013869 202 LTEAW-EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMY 280 (435)
Q Consensus 202 ~~~~~-~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~ 280 (435)
....+ .+.++|++++++|++|.+++.. .+.++..|+++.+.......+....+.+ .....++++++|++.++|.++
T Consensus 282 ~~~~~~~~~~~d~~l~~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~l~~~~~~~~~--~~~~~i~~~~pT~~~~vP~~l 358 (696)
T PLN02387 282 VMTVVPKLGKNDVYLAYLPLAHILELAA-ESVMAAVGAAIGYGSPLTLTDTSNKIKK--GTKGDASALKPTLMTAVPAIL 358 (696)
T ss_pred HHhhcCCCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEECChhhhccccccccc--CchhhHHHhCCcEEEehhHHH
Confidence 76654 5788999999999999999875 4556788888877554322211110000 000116679999999999999
Q ss_pred HHHHhhhccccHH---------------------------------------HHHHhhhhccccEEEEecCCCCCHHHHH
Q 013869 281 TRLIQGYEAMDTE---------------------------------------LQAASASAAKQLRLMMCGSSALPLPVMQ 321 (435)
Q Consensus 281 ~~l~~~~~~~~~~---------------------------------------~~~~~~~~l~~lr~i~~~G~~l~~~l~~ 321 (435)
..+.+........ ..+......+++|.+++||+++++++.+
T Consensus 359 ~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~ 438 (696)
T PLN02387 359 DRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQR 438 (696)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHH
Confidence 9998653211000 0000001126899999999999999988
Q ss_pred HHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEec-CCCCC----CCCccceEEEecCCccccccC
Q 013869 322 QWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAE-DESGS----DAAGVGEICVKSPSLFKEYWK 396 (435)
Q Consensus 322 ~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~----~~~~~Gel~v~~~~~~~gy~~ 396 (435)
.+...+++++++.||+||+++.++.........+++|+|+|+++++|+| +++.. .+...|||+++|++++.||++
T Consensus 439 ~~~~~~g~~v~~~YG~TEt~~~~~~~~~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~ 518 (696)
T PLN02387 439 FINICLGAPIGQGYGLTETCAGATFSEWDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFK 518 (696)
T ss_pred HHHHHcCCCeeEeechhhcccceeecCcccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcC
Confidence 8888889999999999999765543333344568999999999999998 44432 122369999999999999999
Q ss_pred Cchhccccc--ccCC--ccccCceEEEcCCccEEEecccccCC
Q 013869 397 LPKVTKDSF--TADG--FFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 397 ~~~~~~~~~--~~~g--~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+|+.|.+.| +++| ||+|||+|++|+||+|++.||+||+|
T Consensus 519 ~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~i 561 (696)
T PLN02387 519 NQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIV 561 (696)
T ss_pred CHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceE
Confidence 999999998 4445 99999999999999999999999986
No 14
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=3.5e-58 Score=462.30 Aligned_cols=397 Identities=24% Similarity=0.349 Sum_probs=323.9
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
.++.+.|.++++++|+++|++..++++||+||.++++++|++|.+ +|+++||+|+++++|+++
T Consensus 7 ~~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~-----------------~Gv~~gd~V~v~~~n~~~ 69 (563)
T PLN02860 7 AHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLR-----------------LGLRNGDVVAIAALNSDL 69 (563)
T ss_pred hHHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCCCHH
Confidence 378899999999999999999989999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHh-ccCC-c-cccCCCCCC-----CCCc
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS-KSGA-K-FSLIPPVPN-----VSSE 152 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~-~-~~~~~~~~~-----~~~~ 152 (435)
+++++|||+++|++++|+++.++.+++.++++++++++++++++.......... ..+. . ......... ....
T Consensus 70 ~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 149 (563)
T PLN02860 70 YLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSF 149 (563)
T ss_pred HHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhc
Confidence 999999999999999999999999999999999999999998865433322211 1111 0 000000000 0000
Q ss_pred ccccc---c--hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHH
Q 013869 153 TTVFD---Q--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF 227 (435)
Q Consensus 153 ~~~~~---~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~ 227 (435)
..... . ..........++++++++|||||||.||+|.++|+++..+.......+++.++|+++...|++|..++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 229 (563)
T PLN02860 150 LTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 229 (563)
T ss_pred cccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHH
Confidence 00000 0 000111234578999999999999999999999999988777777778899999999999999999986
Q ss_pred HHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEE
Q 013869 228 NALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307 (435)
Q Consensus 228 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~ 307 (435)
.++.++..|+++++.+++++..+++. ++++++|++.++|+++..|++.... ......++++|.
T Consensus 230 -~~~~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~ 292 (563)
T PLN02860 230 -SALAMLMVGACHVLLPKFDAKAALQA----------IKQHNVTSMITVPAMMADLISLTRK------SMTWKVFPSVRK 292 (563)
T ss_pred -HHHHHHHcCceEEecCCCCHHHHHHH----------HHHhCCeeEEeChHHHHHHHHhhhh------hhccccccceeE
Confidence 58899999999999999999988888 6679999999999999999875321 112245789999
Q ss_pred EEecCCCCCHHHHHHHHHHh-CCcccccccCccccchhccC-CCC----------------------CCCCCccceecCC
Q 013869 308 MMCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNP-LRG----------------------ARKAGTVGNPLPG 363 (435)
Q Consensus 308 i~~~G~~l~~~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~-~~~----------------------~~~~~~~G~p~~~ 363 (435)
+++||+++++++.+.|++.| +.++++.||+||++..++.. ... .....++|+|+++
T Consensus 293 ~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~ 372 (563)
T PLN02860 293 ILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPH 372 (563)
T ss_pred EEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCC
Confidence 99999999999999999998 78999999999987544311 100 1123478999999
Q ss_pred CeEEEecCCCCCCCCccceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 364 VQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 364 ~~~~i~d~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++++|++++ ++..|||+++|+.++.||+++++.+...++.+|||+|||+|++|+||++++.||.+|+|
T Consensus 373 ~~v~i~~~~----~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i 440 (563)
T PLN02860 373 VELKIGLDE----SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRI 440 (563)
T ss_pred cEEEEecCC----CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeeccccee
Confidence 999999865 45579999999999999999999999999889999999999999999999999999986
No 15
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=8.6e-58 Score=463.34 Aligned_cols=399 Identities=22% Similarity=0.335 Sum_probs=314.3
Q ss_pred hHHHHHHHhcccCCCeeEEEeC-----CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeC
Q 013869 2 EVFKAAYKKGSMARDSVAIRAD-----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~-----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~ 76 (435)
++.+.|.+++.++|+++|++.. .+++||+||.++++++|++|.+. |+++||+|+++++
T Consensus 40 ~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~-----------------Gv~~gd~Vai~~~ 102 (614)
T PRK08180 40 RLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDR-----------------GLSAERPLMILSG 102 (614)
T ss_pred cHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEecC
Confidence 6789999999999999999864 26899999999999999999994 9999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeEEeCCCCCC-----HHHHHHHHhcCCccEEEechh--hHHHHHHHHhccCCccccCCCCCCC
Q 013869 77 PSFEFVAGVLGTWFSGCIAVPLALSYP-----ESELLHVMHDSDISMVLSTED--YREVLQNVASKSGAKFSLIPPVPNV 149 (435)
Q Consensus 77 ~~~~~~~~~lA~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (435)
|++++++++|||+++|++++|+++.++ .+++.++++.+++++++++.. ....+..... ....+.........
T Consensus 103 n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~ 181 (614)
T PRK08180 103 NSIEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP-ADVEVVAVRGAVPG 181 (614)
T ss_pred CCHHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc-CCceEEEecCCCCC
Confidence 999999999999999999999999988 789999999999999999854 2222222111 11111111100000
Q ss_pred ---CCccccccch----hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCC--CCCeeEEeecc
Q 013869 150 ---SSETTVFDQS----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT--SADQFLHCLPL 220 (435)
Q Consensus 150 ---~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~--~~~~~l~~~pl 220 (435)
.......... .........++++++|+|||||||.||+|.+||+++..++......++.. ..+++++.+|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl 261 (614)
T PRK08180 182 RAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPW 261 (614)
T ss_pred cccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecch
Confidence 0000000000 00111234678999999999999999999999999998888877776654 56899999999
Q ss_pred hhhhHHHHHHHHHHHcCCEEEEcCC-cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhh
Q 013869 221 HHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299 (435)
Q Consensus 221 ~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 299 (435)
+|..++...++.++..|+++++.+. +++..+...+.. +.++++|++.++|.++..|++..+..+ ....
T Consensus 262 ~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~-------i~~~~~t~~~~vP~~~~~l~~~~~~~~----~~~~ 330 (614)
T PRK08180 262 NHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRN-------LREISPTVYFNVPKGWEMLVPALERDA----ALRR 330 (614)
T ss_pred HHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHH-------HHHhCCcEEechHHHHHHHHHHHHhch----hhhh
Confidence 9999987778899999999999763 454433333322 677999999999999999987643221 1223
Q ss_pred hhccccEEEEecCCCCCHHHHHHHHHH----hC--CcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCC
Q 013869 300 SAAKQLRLMMCGSSALPLPVMQQWETI----TG--HRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDES 373 (435)
Q Consensus 300 ~~l~~lr~i~~~G~~l~~~l~~~~~~~----~~--~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~ 373 (435)
..++++|.+++||+++++++.+.|.+. ++ +++++.||+||++.+++.......+.+++|+|++|++++++|++
T Consensus 331 ~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~d~~- 409 (614)
T PRK08180 331 RFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGPLSRAGNIGLPAPGCEVKLVPVG- 409 (614)
T ss_pred hhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccccCCCCcccCccCCcEEEEecCC-
Confidence 457899999999999999999999875 33 67999999999986655433334567899999999999999863
Q ss_pred CCCCCccceEEEecCCccccccCCchhcccccccCCccccCceEEE----cCCccEEEecccccCC
Q 013869 374 GSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQ----DEDGYYIILGRKGIYF 435 (435)
Q Consensus 374 ~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~----~~dG~l~~~gR~~d~i 435 (435)
+.|||+++|+.++.||+++|+.+.+.|+++|||+|||+|++ |+||+++|.||++|+|
T Consensus 410 -----~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i 470 (614)
T PRK08180 410 -----GKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDF 470 (614)
T ss_pred -----CCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhE
Confidence 24999999999999999999999999988999999999999 4689999999998764
No 16
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.1e-58 Score=459.28 Aligned_cols=396 Identities=22% Similarity=0.295 Sum_probs=327.6
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.+.|.++++++||++|++++++++||+||.++++++|++|.+. |+++||+|+++++|++++
T Consensus 50 ~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~-----------------gi~~gd~V~i~~~n~~~~ 112 (549)
T PRK07788 50 PFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLAL-----------------GVRAGDGVAVLARNHRGF 112 (549)
T ss_pred hHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcCCCHHH
Confidence 578889999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCcccc-CCCCCCC---CCcccccc
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSL-IPPVPNV---SSETTVFD 157 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~ 157 (435)
++++|||+++|++++|+++.++.+++.++++++++++++++++..+.+............. ....... .......+
T Consensus 113 ~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (549)
T PRK07788 113 VLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDD 192 (549)
T ss_pred HHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHH
Confidence 9999999999999999999999999999999999999999998877665542222111110 0000000 00000000
Q ss_pred ch--hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHH
Q 013869 158 QS--QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLY 235 (435)
Q Consensus 158 ~~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~ 235 (435)
.. ..........++.++++|||||||.||+|.++|+++...+......+++...++++...|++|..++. .++.++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~-~~~~~l~ 271 (549)
T PRK07788 193 LIAGSSTAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWA-HLTLAMA 271 (549)
T ss_pred HhcCCCCCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHH-HHHHHHH
Confidence 00 00111223457889999999999999999999999999888888888899999999999999999986 4788999
Q ss_pred cCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCC
Q 013869 236 AGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSAL 315 (435)
Q Consensus 236 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l 315 (435)
.|+++++.+.+++..+++. +.++++|++.++|+++..+++..+.. .....++++|.+++||+++
T Consensus 272 ~G~~~v~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~i~~gG~~l 335 (549)
T PRK07788 272 LGSTVVLRRRFDPEATLED----------IAKHKATALVVVPVMLSRILDLGPEV------LAKYDTSSLKIIFVSGSAL 335 (549)
T ss_pred hCCEEEECCCCCHHHHHHH----------HHHhCCcEEEEHHHHHHHHHhCcccc------cCCCCCCceeEEEEeCCCC
Confidence 9999999998999998888 56689999999999999998753321 1233578999999999999
Q ss_pred CHHHHHHHHHHhCCcccccccCccccchhccCCC-CCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCcccc
Q 013869 316 PLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKE 393 (435)
Q Consensus 316 ~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~g 393 (435)
++++.+.|.+.++.++++.||+||++.++..... ....+.++|+|+++++++++|++++.++.+ .|||+++|+.++.|
T Consensus 336 ~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~g 415 (549)
T PRK07788 336 SPELATRALEAFGPVLYNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILDENGNEVPRGVVGRIFVGNGFPFEG 415 (549)
T ss_pred CHHHHHHHHHHhCccceeccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEECCCcCCCCCCCeEEEEEeCCCcccc
Confidence 9999999999999999999999999865543322 234567899999999999999999887766 79999999999999
Q ss_pred ccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 394 YWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 394 y~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|+++++. . ..+|||+|||+|++|+||++++.||.||+|
T Consensus 416 Y~~~~~~--~--~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i 453 (549)
T PRK07788 416 YTDGRDK--Q--IIDGLLSSGDVGYFDEDGLLFVDGRDDDMI 453 (549)
T ss_pred ccCCCcc--c--ccCCceecCceEEEcCCCCEEEeccCcceE
Confidence 9998765 2 237999999999999999999999999986
No 17
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=3.1e-58 Score=439.86 Aligned_cols=405 Identities=25% Similarity=0.398 Sum_probs=320.5
Q ss_pred ChHHHHHHHhcccCCCeeEEEe--------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 013869 1 MEVFKAAYKKGSMARDSVAIRA--------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~--------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (435)
+|+++.|.+.+..+|+.+++-. ..+.+||+|.++++.+++..|++ +|+++++.|+
T Consensus 75 ~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~-----------------lG~~~~~~VG 137 (691)
T KOG1256|consen 75 LTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRK-----------------LGVKEDSKVG 137 (691)
T ss_pred ccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCceEE
Confidence 4789999999999999999965 23689999999999999999998 5999999999
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEec-hhhHHHHHHHHhc--cCC-c-cccCCCCC
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLST-EDYREVLQNVASK--SGA-K-FSLIPPVP 147 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~~~~~~~--~~~-~-~~~~~~~~ 147 (435)
|++-|++||++..+||...|.++|||....+++.+.++++.+.+.++|++ ++....+.+.... .+. + ++.+....
T Consensus 138 Iy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~ 217 (691)
T KOG1256|consen 138 IYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPS 217 (691)
T ss_pred EeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCc
Confidence 99999999999999999999999999999999999999999999999999 5555555554332 211 1 11111111
Q ss_pred -CCCC---c-----------cccccchhhhhc-cCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh---c--
Q 013869 148 -NVSS---E-----------TTVFDQSQAEKM-DGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---W-- 206 (435)
Q Consensus 148 -~~~~---~-----------~~~~~~~~~~~~-~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~-- 206 (435)
.... . ..... ...... .+..++|.|.|.|||||||.||||.+||+|+.+.+...... .
T Consensus 218 ~~~~~~~~~~gv~v~S~~e~~~lG~-~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~ 296 (691)
T KOG1256|consen 218 DELKEKAENNGVEVYSWDEFEELGK-KNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENA 296 (691)
T ss_pred hhhhhhhhcCCeEEEEHHHHHhhcc-cccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccc
Confidence 0000 0 00000 011112 47789999999999999999999999999999866542221 1
Q ss_pred -cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHh
Q 013869 207 -EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQ 285 (435)
Q Consensus 207 -~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 285 (435)
.....|.+++++||.|++..+...+ .+..|+++.+..+ |+...... ++..+||.+.++|.+|+++.+
T Consensus 297 ~~~~~~dv~lSyLPLAHi~er~~~~~-~~~~G~~IgF~~g-D~~~l~~d----------lk~lkPT~f~~VPRVl~riye 364 (691)
T KOG1256|consen 297 KATVGDDVYLSYLPLAHIFERVVELY-TFYIGAKIGFARG-DILKLTDD----------LKELKPTVFPGVPRVLERIYE 364 (691)
T ss_pred cccccCceEEEeCcHHHHHHHHHHHh-HhhcccEEEEecC-ChHHHHHH----------HHHhCCcEEeccHhHHHHHHH
Confidence 2234699999999999999986444 4689999999885 66555555 556899999999999999987
Q ss_pred hhccccHHHH-------------------------------------HHhhhhccccEEEEecCCCCCHHHHHHHHHHhC
Q 013869 286 GYEAMDTELQ-------------------------------------AASASAAKQLRLMMCGSSALPLPVMQQWETITG 328 (435)
Q Consensus 286 ~~~~~~~~~~-------------------------------------~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~ 328 (435)
...+.-.+.+ +.+......+|.+++|++|+++++...++..++
T Consensus 365 ~I~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g 444 (691)
T KOG1256|consen 365 GIQKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALG 444 (691)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcC
Confidence 6431111000 011112368999999999999999999999999
Q ss_pred CcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecC--CCCCCCCccceEEEecCCccccccCCchhcccccc
Q 013869 329 HRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAED--ESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFT 406 (435)
Q Consensus 329 ~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~--~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 406 (435)
+++++.||+||+++.++.........+++|.|.|+++++++|. -+..+.+..||||++|++++.||+++|+.|++++|
T Consensus 445 ~~v~eGYGlTEts~g~~~~~~~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~id 524 (691)
T KOG1256|consen 445 CRVLEGYGLTETSAGTTLTLPGDNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAID 524 (691)
T ss_pred ceeeecccccccCCceEeccCCCCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhc
Confidence 9999999999998444433333338899999999999999883 34445556799999999999999999999999999
Q ss_pred cCCccccCceEEEcCCccEEEecccccCC
Q 013869 407 ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 407 ~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+|||+||||+|+++++|.|++.||++++|
T Consensus 525 eDGWLhTGDiG~~~p~G~l~IidRkK~if 553 (691)
T KOG1256|consen 525 EDGWLHTGDIGEWDPNGTLKIIDRKKNIF 553 (691)
T ss_pred cccccccccceeECCCccEEEEecccceE
Confidence 99999999999999999999999999986
No 18
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=3.6e-57 Score=461.37 Aligned_cols=399 Identities=20% Similarity=0.293 Sum_probs=317.8
Q ss_pred HHHHHHhcc-cCCCeeEEEeC------CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeC
Q 013869 4 FKAAYKKGS-MARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (435)
Q Consensus 4 ~~~~~~~~~-~~p~~~al~~~------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~ 76 (435)
.++|.+++. .+|+++|+++. .+++||+||.++++++|++|++ .|+++||+|+|+++
T Consensus 91 ~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GdrV~i~~p 153 (666)
T PLN02654 91 YNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKD-----------------VGVKKGDAVVIYLP 153 (666)
T ss_pred HHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 456666775 48999999873 3689999999999999999999 49999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHH---------HHHHHHhccC---Cc---cc
Q 013869 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE---------VLQNVASKSG---AK---FS 141 (435)
Q Consensus 77 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~---~~---~~ 141 (435)
|++++++++|||+++|++++|+++.++.+++.++++.++++++|++..... .+........ .. +.
T Consensus 154 n~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (666)
T PLN02654 154 MLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICL 233 (666)
T ss_pred CCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEE
Confidence 999999999999999999999999999999999999999999999876432 1222111110 00 00
Q ss_pred cCCCCCCC---C-Cccc-----cc---cchh-hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHH-HHHHHHHhcc
Q 013869 142 LIPPVPNV---S-SETT-----VF---DQSQ-AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA-QVQMLTEAWE 207 (435)
Q Consensus 142 ~~~~~~~~---~-~~~~-----~~---~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~-~~~~~~~~~~ 207 (435)
........ . .... .. ...+ ..+......+++++|+|||||||.||||+++|.+++. ........++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~ 313 (666)
T PLN02654 234 TYENQLAMKREDTKWQEGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFD 313 (666)
T ss_pred EecccccccccccccccCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcC
Confidence 00000000 0 0000 00 0000 0111234679999999999999999999999999754 4455566778
Q ss_pred CCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC----cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHH
Q 013869 208 YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (435)
Q Consensus 208 ~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 283 (435)
+.++|++++..|++|..+....++++|..|+++++.++ +++..+++. |+++++|++.++|++++.|
T Consensus 314 ~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l 383 (666)
T PLN02654 314 YKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDI----------VDKYKVTIFYTAPTLVRSL 383 (666)
T ss_pred CCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHH----------HHHhCCeEEEeCHHHHHHH
Confidence 99999999999999999987778999999999999874 467777777 6779999999999999999
Q ss_pred HhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhC---CcccccccCccccchhccCCC--CCCCCCccc
Q 013869 284 IQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG---HRLLERYGMTEFVMAISNPLR--GARKAGTVG 358 (435)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~---~~l~~~YG~tE~~~~~~~~~~--~~~~~~~~G 358 (435)
.+.... .....++++||.++++|+++++++++.+.+.++ +++.+.||+||+++....+.. ...+++++|
T Consensus 384 ~~~~~~------~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G 457 (666)
T PLN02654 384 MRDGDE------YVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSAT 457 (666)
T ss_pred HhhCcc------ccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccC
Confidence 875321 122346789999999999999999999999997 689999999999865543322 134678899
Q ss_pred eecCCCeEEEecCCCCCCCCc-cceEEEec--CCccccccCCchhccccccc--CCccccCceEEEcCCccEEEeccccc
Q 013869 359 NPLPGVQVKIAEDESGSDAAG-VGEICVKS--PSLFKEYWKLPKVTKDSFTA--DGFFKTGDTGKQDEDGYYIILGRKGI 433 (435)
Q Consensus 359 ~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~--~~~~~gy~~~~~~~~~~~~~--~g~~~TGD~g~~~~dG~l~~~gR~~d 433 (435)
+|++|++++|+|++|+.++++ .|||++++ |+++.||+++++.+...+.. +|||+|||+|++|+||+++++||+||
T Consensus 458 ~p~~g~~v~i~d~~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd 537 (666)
T PLN02654 458 FPFFGVQPVIVDEKGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDD 537 (666)
T ss_pred CCCCCceEEEECCCCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccC
Confidence 999999999999999888777 69999999 78999999999888776533 78999999999999999999999999
Q ss_pred CC
Q 013869 434 YF 435 (435)
Q Consensus 434 ~i 435 (435)
+|
T Consensus 538 ~I 539 (666)
T PLN02654 538 VI 539 (666)
T ss_pred eE
Confidence 86
No 19
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=6.1e-57 Score=458.05 Aligned_cols=396 Identities=26% Similarity=0.392 Sum_probs=318.1
Q ss_pred hHHHHHHHhcccCCCeeEEEe--------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEE
Q 013869 2 EVFKAAYKKGSMARDSVAIRA--------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGI 73 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~--------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i 73 (435)
|+++.|.++++++|+++|++. ..+++||+||.+++.++|++|++ +|+++||+|++
T Consensus 26 t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-----------------~Gi~~gd~V~i 88 (632)
T PRK07529 26 STYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHS-----------------LGVGPGDVVAF 88 (632)
T ss_pred CHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEE
Confidence 688999999999999999985 35799999999999999999999 49999999999
Q ss_pred EeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhh-----HHHHHHHHhccCCc--cccCCCC
Q 013869 74 VAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKSGAK--FSLIPPV 146 (435)
Q Consensus 74 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~--~~~~~~~ 146 (435)
+++|++++++++|||+++| +++|+++.++.+++.++++.+++++++++..+ .+.+.......+.. +..+...
T Consensus 89 ~~~n~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 167 (632)
T PRK07529 89 LLPNLPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLA 167 (632)
T ss_pred ECCCCHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCc
Confidence 9999999999999999999 56999999999999999999999999997543 33333332222211 1111110
Q ss_pred CCCC-------------------Ccc-ccccch--hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHH
Q 013869 147 PNVS-------------------SET-TVFDQS--QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE 204 (435)
Q Consensus 147 ~~~~-------------------~~~-~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~ 204 (435)
.... ... ...... .........++++++++|||||||.||+|.++|+++..+......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~ 247 (632)
T PRK07529 168 RYLPGPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGAL 247 (632)
T ss_pred ccccccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHH
Confidence 0000 000 000000 001112346799999999999999999999999999988888777
Q ss_pred hccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcc------hhHHHHHHHhhcCCCCCccccccceeccccH
Q 013869 205 AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFS------VRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (435)
Q Consensus 205 ~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~ 278 (435)
.+++.+++++++.+|++|..+.+..++.++..|+++++.++.. ...+++. ++++++|++.++|+
T Consensus 248 ~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~ 317 (632)
T PRK07529 248 LLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKI----------VERYRINFLSGVPT 317 (632)
T ss_pred hcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHH----------HHHhCCeEEEeHHH
Confidence 8888999999999999999998878999999999999987422 1344455 67799999999999
Q ss_pred HHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCC-CCCCCCcc
Q 013869 279 MYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTV 357 (435)
Q Consensus 279 ~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~~~ 357 (435)
++..+++... ...+++++|.+++||+++++++.++|++.+++++++.||+||++.+++.... .....+++
T Consensus 318 ~~~~l~~~~~---------~~~~~~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~sv 388 (632)
T PRK07529 318 VYAALLQVPV---------DGHDISSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPDGERRIGSV 388 (632)
T ss_pred HHHHHHhCcc---------cCCCccceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCccccccCCCc
Confidence 9999987521 2236789999999999999999999999999999999999999876654332 23467899
Q ss_pred ceecCCCeEEEe--cCCC---CCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEeccc
Q 013869 358 GNPLPGVQVKIA--EDES---GSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRK 431 (435)
Q Consensus 358 G~p~~~~~~~i~--d~~~---~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~ 431 (435)
|+|+|+++++++ |+++ ..++.+ .|||+++|++++.||++++ .+...|..+|||+|||+|++|+||++++.||.
T Consensus 389 G~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~-~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~ 467 (632)
T PRK07529 389 GLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAA-HNKGLWLEDGWLNTGDLGRIDADGYFWLTGRA 467 (632)
T ss_pred ccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCc-cccccccCCCceEcCcEEEEcCCceEEEEecc
Confidence 999999999885 5656 455555 7999999999999999865 45666667899999999999999999999999
Q ss_pred ccCC
Q 013869 432 GIYF 435 (435)
Q Consensus 432 ~d~i 435 (435)
||+|
T Consensus 468 ~d~i 471 (632)
T PRK07529 468 KDLI 471 (632)
T ss_pred cCEE
Confidence 9986
No 20
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1e-56 Score=450.98 Aligned_cols=401 Identities=27% Similarity=0.409 Sum_probs=333.5
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+|+.+.|.++++.+|+++|++..++++||+||.+++.++|..|.+. .|+++|++|+++++|+++
T Consensus 10 ~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~----------------~g~~~g~~V~i~~~~~~~ 73 (546)
T PRK08314 10 TSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQE----------------CGVRKGDRVLLYMQNSPQ 73 (546)
T ss_pred CCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHh----------------hCCCCCCEEEEECCCChH
Confidence 4788999999999999999999999999999999999999999983 389999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCC-------CC---
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN-------VS--- 150 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--- 150 (435)
++++++||+++|++++|+++..+.+++.++++.+++++++++.+..+.+.............+..... ..
T Consensus 74 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (546)
T PRK08314 74 FVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPA 153 (546)
T ss_pred HHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCccc
Confidence 99999999999999999999999999999999999999999998877665543321111000000000 00
Q ss_pred --------------Cccccc---cchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCe
Q 013869 151 --------------SETTVF---DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQ 213 (435)
Q Consensus 151 --------------~~~~~~---~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~ 213 (435)
...... ............++++++++|||||||.||+|.++|++++.++.......++...|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~ 233 (546)
T PRK08314 154 WLRAEPPLQALAPGGVVAWKEALAAGLAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESV 233 (546)
T ss_pred ccccccccccccccccccHHHHhcccCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCce
Confidence 000000 000011223456789999999999999999999999999999988888888999999
Q ss_pred eEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHH
Q 013869 214 FLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTE 293 (435)
Q Consensus 214 ~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 293 (435)
+++.+|++|..|+...++.++..|+++++.+.+++..++.. ++++++|++.++|+++..+++...
T Consensus 234 ~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~ll~~~~----- 298 (546)
T PRK08314 234 VLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARL----------IERYRVTHWTNIPTMVVDFLASPG----- 298 (546)
T ss_pred EEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHH----------HHHhcCceecccHHHHHHHHhCCC-----
Confidence 99999999999988888999999999999999998888887 566899999999999998886422
Q ss_pred HHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecC-C
Q 013869 294 LQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAED-E 372 (435)
Q Consensus 294 ~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~ 372 (435)
....+++++|.+++||+++++++++.|.+.++.++++.||+||++..............++|.|+++++++|+|+ +
T Consensus 299 ---~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~ 375 (546)
T PRK08314 299 ---LAERDLSSLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPDRPKLQCLGIPTFGVDARVIDPET 375 (546)
T ss_pred ---ccccCchhhheeeeccccCCHHHHHHHHHHcCCcEEecccccccccceecCCCcCCCCCccCcccCCeEEEEEeCCC
Confidence 122356789999999999999999999999999999999999998766544333345678999999999999995 4
Q ss_pred CCCCCCc-cceEEEecCCccccccCCchhcccccc---cCCccccCceEEEcCCccEEEecccccCC
Q 013869 373 SGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFT---ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 373 ~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~---~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+...+.+ .|||+++|+.++.||+++++.+++.|. +++||+|||+|+++++|++++.||.||+|
T Consensus 376 ~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i 442 (546)
T PRK08314 376 LEELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMI 442 (546)
T ss_pred CcCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhE
Confidence 6666555 799999999999999999999888774 24699999999999999999999999975
No 21
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-56 Score=454.92 Aligned_cols=400 Identities=22% Similarity=0.270 Sum_probs=310.3
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCC------cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEE
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIV 74 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~ 74 (435)
.++.+.|.++++++||++|+++.+ +++||+||.++++++|++|.+. |+++||+|+++
T Consensus 49 ~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-----------------Gv~~gd~V~i~ 111 (624)
T PRK12582 49 RSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDL-----------------GLDPGRPVMIL 111 (624)
T ss_pred cCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEe
Confidence 368899999999999999998743 6899999999999999999984 99999999999
Q ss_pred eCCCHHHHHHHHHHHHhCCeEEeCCCCCCH-----HHHHHHHhcCCccEEEechhh--HHHHHHHHhccCCccccCCCCC
Q 013869 75 AKPSFEFVAGVLGTWFSGCIAVPLALSYPE-----SELLHVMHDSDISMVLSTEDY--REVLQNVASKSGAKFSLIPPVP 147 (435)
Q Consensus 75 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 147 (435)
++|++++++++|||+++|++++|+++.++. +++.++++.++++++|++... ...+.... .....+..+....
T Consensus 112 ~~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~i~~~~~~ 190 (624)
T PRK12582 112 SGNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALD-LLDVTVVHVTGPG 190 (624)
T ss_pred cCCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhh-hcCceEEEEcCCC
Confidence 999999999999999999999999999885 899999999999999998642 22222211 1111111111100
Q ss_pred CC---CCccccccch----hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCC---CCeeEEe
Q 013869 148 NV---SSETTVFDQS----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTS---ADQFLHC 217 (435)
Q Consensus 148 ~~---~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~---~~~~l~~ 217 (435)
.. .......... .........++++++++|||||||.||+|.+||+++..+............ .++++.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 270 (624)
T PRK12582 191 EGIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDW 270 (624)
T ss_pred cccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEe
Confidence 00 0000000000 001112346789999999999999999999999999888776655544443 5799999
Q ss_pred ecchhhhHHHHHHHHHHHcCCEEEEcCC-cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHH
Q 013869 218 LPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA 296 (435)
Q Consensus 218 ~pl~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 296 (435)
+|++|.+++...++.++..|+++++.++ +++..+...+.. ++++++|++.++|.++..|++..+..+ .
T Consensus 271 lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~-------i~~~~~t~~~~vP~~~~~l~~~~~~~~----~ 339 (624)
T PRK12582 271 MPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRN-------LREISPTVYGNVPAGYAMLAEAMEKDD----A 339 (624)
T ss_pred chHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHH-------HHhcCCeEEeccCHHHHHHHHHHhhCH----H
Confidence 9999999987777889999999999863 344333333332 677999999999999999976543211 1
Q ss_pred HhhhhccccEEEEecCCCCCHHHHHHHHHHh------CCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEec
Q 013869 297 ASASAAKQLRLMMCGSSALPLPVMQQWETIT------GHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAE 370 (435)
Q Consensus 297 ~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~------~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d 370 (435)
.....++++|.+++||+++++++.+.|.+.+ ++++++.||+||++.+++.......+.+++|+|++|+++++++
T Consensus 340 ~~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~~ 419 (624)
T PRK12582 340 LRRSFFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWDTERVGLIGLPLPGVELKLAP 419 (624)
T ss_pred HHHHHhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCCCCCCCCCCcCCCCcEEEEcc
Confidence 2234578999999999999999999998863 3679999999999876553222335567999999999999974
Q ss_pred CCCCCCCCccceEEEecCCccccccCCchhcccccccCCccccCceEEE-c---CCccEEEecccccCC
Q 013869 371 DESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQ-D---EDGYYIILGRKGIYF 435 (435)
Q Consensus 371 ~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~-~---~dG~l~~~gR~~d~i 435 (435)
. +..|||+++|++++.||+++|+.+.+.|+++|||+|||+|++ | +||++++.||+||+|
T Consensus 420 ~------G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i 482 (624)
T PRK12582 420 V------GDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDF 482 (624)
T ss_pred C------CCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhE
Confidence 3 236999999999999999999999999988999999999998 4 469999999999875
No 22
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=4.1e-56 Score=446.17 Aligned_cols=396 Identities=24% Similarity=0.365 Sum_probs=328.3
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC------cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEe
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~ 75 (435)
++.+.|.+.++.+|+++|+++.+ +.+||+||.++++++|++|.+. |+++||+|++++
T Consensus 25 ~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-----------------g~~~g~~Val~~ 87 (547)
T PRK13295 25 TINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARL-----------------GVGRGDVVSCQL 87 (547)
T ss_pred CHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEC
Confidence 67889999999999999999865 8999999999999999999994 999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhh-----HHHHHHHHhccCC--ccccCCCCCC
Q 013869 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKSGA--KFSLIPPVPN 148 (435)
Q Consensus 76 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~ 148 (435)
+|++++++++|||+++|++++|+++.++.+++.++++.++++++++++.+ .+.+......... .+..+.. ..
T Consensus 88 ~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 166 (547)
T PRK13295 88 PNWWEFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGG-DG 166 (547)
T ss_pred CCChHHHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecC-CC
Confidence 99999999999999999999999999999999999999999999998754 2222222222211 1111110 00
Q ss_pred CCCcccc---------ccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeec
Q 013869 149 VSSETTV---------FDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLP 219 (435)
Q Consensus 149 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~p 219 (435)
....... .+............+++++++|||||||.||+|.++|+++..++......+++.+.++++...|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p 246 (547)
T PRK13295 167 ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASP 246 (547)
T ss_pred ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecC
Confidence 0000000 0000001112345689999999999999999999999999999888888889999999999999
Q ss_pred chhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhh
Q 013869 220 LHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299 (435)
Q Consensus 220 l~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 299 (435)
++|..+++..++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+....+. ..
T Consensus 247 ~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~----------l~~~~vt~~~~~p~~~~~l~~~~~~--------~~ 308 (547)
T PRK13295 247 MAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAEL----------IRTEGVTFTMASTPFLTDLTRAVKE--------SG 308 (547)
T ss_pred chhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHH----------HHHcCCcEEEecHHHHHHHHhcccc--------cC
Confidence 99999988889999999999999999999888888 5668999999999999999875322 23
Q ss_pred hhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCC--CCCCCccceecCCCeEEEecCCCCCCC
Q 013869 300 SAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDA 377 (435)
Q Consensus 300 ~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~--~~~~~~~G~p~~~~~~~i~d~~~~~~~ 377 (435)
..++++|.+++||+++++++.+.|.+.++.++++.||+||++.+.+..... .....++|+|+++++++|+|++++..+
T Consensus 309 ~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~ 388 (547)
T PRK13295 309 RPVSSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGAPLP 388 (547)
T ss_pred CCcccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCCCCC
Confidence 457889999999999999999999999999999999999998665533221 233568899999999999999888877
Q ss_pred Cc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 378 AG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 378 ~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
.+ .|||+++|+.++.||+++++.+... .+|||+|||+|++++||.+++.||.+|+|
T Consensus 389 ~g~~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i 445 (547)
T PRK13295 389 AGQIGRLQVRGCSNFGGYLKRPQLNGTD--ADGWFDTGDLARIDADGYIRISGRSKDVI 445 (547)
T ss_pred CCCCCeEEEEcCcccccccCCccccccC--CCCCeecceEEEEcCCceEEEEeccCCeE
Confidence 66 7999999999999999999888776 47899999999999999999999999975
No 23
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-56 Score=445.08 Aligned_cols=400 Identities=29% Similarity=0.444 Sum_probs=338.1
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+++.+.|.+.++.+|+++|+++.++++||+||++++.++|..|.+. |+++||+|+++++|+++
T Consensus 5 ~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------gv~~g~~V~l~~~~~~~ 67 (513)
T PRK07656 5 MTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAAL-----------------GIGKGDRVAIWAPNSPH 67 (513)
T ss_pred ccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCChH
Confidence 4688999999999999999999999999999999999999999984 99999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCc--cccCCCCCCCC------Cc
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK--FSLIPPVPNVS------SE 152 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~ 152 (435)
++++++||+++|++++|+++..+.+++..++++++++++++++................ +.......... ..
T Consensus 68 ~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (513)
T PRK07656 68 WVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTF 147 (513)
T ss_pred HHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccH
Confidence 99999999999999999999999999999999999999999988776655543322211 11111100000 00
Q ss_pred cccccch-hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHH
Q 013869 153 TTVFDQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALL 231 (435)
Q Consensus 153 ~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~ 231 (435)
....... ..........+++++++|||||||.||+|.++|.++...+......+++.++++++..+|++|.+++...++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (513)
T PRK07656 148 TDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVN 227 (513)
T ss_pred HHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHH
Confidence 0000000 011233457789999999999999999999999999999988888889999999999999999999887899
Q ss_pred HHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEec
Q 013869 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (435)
Q Consensus 232 ~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~ 311 (435)
.++..|+++++.+.+++..+++. ++++++|++.++|+++..+++..... ...++++|.+++|
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~~~--------~~~~~~l~~v~~~ 289 (513)
T PRK07656 228 APLMRGATILPLPVFDPDEVFRL----------IETERITVLPGPPTMYNSLLQHPDRS--------AEDLSSLRLAVTG 289 (513)
T ss_pred HHHHcCceEEecCcCCHHHHHHH----------HHHhCCeEEechHHHHHHHHcCCCcC--------CCCccceeeEEec
Confidence 99999999999998899888888 56689999999999999998864432 2356889999999
Q ss_pred CCCCCHHHHHHHHHHhCC-cccccccCccccchhccCCC-CCCC--CCccceecCCCeEEEecCCCCCCCCc-cceEEEe
Q 013869 312 SSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLR-GARK--AGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVK 386 (435)
Q Consensus 312 G~~l~~~l~~~~~~~~~~-~l~~~YG~tE~~~~~~~~~~-~~~~--~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~ 386 (435)
|+++++++++.|.+.++. .+++.||+||++++++.... .... ..++|+|+++++++|+|+++..++.+ .|||+++
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~ 369 (513)
T PRK07656 290 AASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGEVGELLVR 369 (513)
T ss_pred CCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCCceEEEEE
Confidence 999999999999999988 99999999999766653322 2222 67899999999999999988887776 7999999
Q ss_pred cCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 387 SPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 387 ~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|+.++.||++++..+...+.++|||+|||+|+++++|.+++.||.+|+|
T Consensus 370 ~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i 418 (513)
T PRK07656 370 GPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMF 418 (513)
T ss_pred cchhhhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceE
Confidence 9999999999999998888778999999999999999999999999975
No 24
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=3.7e-56 Score=453.09 Aligned_cols=399 Identities=21% Similarity=0.314 Sum_probs=317.9
Q ss_pred HHHHHHhcccCCCeeEEEeCC------cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCC
Q 013869 4 FKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (435)
Q Consensus 4 ~~~~~~~~~~~p~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~ 77 (435)
+++|.++++++|+++|++..+ +++||+||.+++.++|+.|++ +|+++||+|+++++|
T Consensus 60 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~n 122 (625)
T TIGR02188 60 YNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKS-----------------LGVKKGDRVAIYMPM 122 (625)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCC
Confidence 566778888899999998643 489999999999999999999 499999999999999
Q ss_pred CHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhh---------HHHHHHHHhccC---CccccCCC
Q 013869 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKSG---AKFSLIPP 145 (435)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~---~~~~~~~~ 145 (435)
+++++++++||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+.......+ ..+..+..
T Consensus 123 ~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (625)
T TIGR02188 123 IPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRR 202 (625)
T ss_pred CHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcC
Confidence 999999999999999999999999999999999999999999998753 233333333222 11111111
Q ss_pred CCCC-C----Cccccc----cchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHH-HHHhccCCCCCeeE
Q 013869 146 VPNV-S----SETTVF----DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM-LTEAWEYTSADQFL 215 (435)
Q Consensus 146 ~~~~-~----~~~~~~----~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~l 215 (435)
.... . ...... ............++++++|+|||||||.||+|.++|.+++..... ....+++.++|+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~ 282 (625)
T TIGR02188 203 TGNPVPWVEGRDVWWHDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFW 282 (625)
T ss_pred CCCCcCccccccccHHHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEE
Confidence 0000 0 000000 000011122456789999999999999999999999997655443 34456788999999
Q ss_pred EeecchhhhHHHHHHHHHHHcCCEEEEcCC----cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhcccc
Q 013869 216 HCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMD 291 (435)
Q Consensus 216 ~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 291 (435)
+..|++|..+..+.++.++..|+++++.+. +++..+++. ++++++|++.++|++++.|.+.....
T Consensus 283 ~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~~- 351 (625)
T TIGR02188 283 CTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEI----------IEKHKVTIFYTAPTAIRALMRLGDEW- 351 (625)
T ss_pred ECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHH----------HHHhCCeEEEeCHHHHHHHHhcCCcc-
Confidence 999999998876678999999999999764 367777777 66799999999999999998753221
Q ss_pred HHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhC---CcccccccCccccchhccCCC--CCCCCCccceecCCCeE
Q 013869 292 TELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG---HRLLERYGMTEFVMAISNPLR--GARKAGTVGNPLPGVQV 366 (435)
Q Consensus 292 ~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~---~~l~~~YG~tE~~~~~~~~~~--~~~~~~~~G~p~~~~~~ 366 (435)
....+++++|.++++|+++++++++.+.+.++ +++++.||+||+++.++.... ...+++++|+|++|+++
T Consensus 352 -----~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~ 426 (625)
T TIGR02188 352 -----VKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEP 426 (625)
T ss_pred -----cccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceE
Confidence 12346789999999999999999999999885 789999999999876543322 23467889999999999
Q ss_pred EEecCCCCCCC-Cc-cceEEEec--CCccccccCCchhccccccc--CCccccCceEEEcCCccEEEecccccCC
Q 013869 367 KIAEDESGSDA-AG-VGEICVKS--PSLFKEYWKLPKVTKDSFTA--DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 367 ~i~d~~~~~~~-~~-~Gel~v~~--~~~~~gy~~~~~~~~~~~~~--~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+|+|++++..+ .+ .|||+++| |+++.||+++++.+.+.+.. +|||+|||+|++|+||++++.||+||+|
T Consensus 427 ~i~d~~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i 501 (625)
T TIGR02188 427 AVVDEEGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVI 501 (625)
T ss_pred EEECCCCCCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEE
Confidence 99999888876 44 79999999 68999999999887777643 7899999999999999999999999986
No 25
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-56 Score=454.11 Aligned_cols=401 Identities=19% Similarity=0.219 Sum_probs=310.3
Q ss_pred HHHHHHhccc--CCCeeEEEeC------CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEe
Q 013869 4 FKAAYKKGSM--ARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (435)
Q Consensus 4 ~~~~~~~~~~--~p~~~al~~~------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~ 75 (435)
.++|.++++. +|+++|++.. .+++||+||.++++++|+.|++ +|+++||+|++++
T Consensus 62 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GDrV~i~~ 124 (647)
T PTZ00237 62 YNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLN-----------------LNISKNDNVLIYM 124 (647)
T ss_pred HHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEC
Confidence 4566677654 7999999873 3589999999999999999999 4999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechh---------hHHHHHHHHhccC---CccccC
Q 013869 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED---------YREVLQNVASKSG---AKFSLI 143 (435)
Q Consensus 76 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~---------~~~~~~~~~~~~~---~~~~~~ 143 (435)
+|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++. +.+.+.+...... ..+..+
T Consensus 125 ~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 204 (647)
T PTZ00237 125 ANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITL 204 (647)
T ss_pred CCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999752 2333333322111 111111
Q ss_pred CCCC--------------CCCCccccccc---------hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHH-HHHHH
Q 013869 144 PPVP--------------NVSSETTVFDQ---------SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKS-IDAQV 199 (435)
Q Consensus 144 ~~~~--------------~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~-l~~~~ 199 (435)
.... .........+. ..........++++++|+|||||||.||||+++|.+ +....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~ 284 (647)
T PTZ00237 205 FRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLK 284 (647)
T ss_pred EcCCcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHH
Confidence 0000 00000000000 000112245678999999999999999999999998 44433
Q ss_pred HHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCc--c----hhHHHHHHHhhcCCCCCcccccccee
Q 013869 200 QMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF--S----VRGIWQRWRESYPVNGNRAGEAITAF 273 (435)
Q Consensus 200 ~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~--~----~~~~~~~~~~~~~~~~~i~~~~~t~~ 273 (435)
............+++++..|++|..+.. .++.++..|+++++.+.. . +..+++. ++++++|++
T Consensus 285 ~~~~~~~~~~~~d~~~~~~~~~w~~~~~-~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~----------i~~~~vt~~ 353 (647)
T PTZ00237 285 YYWRSIIEKDIPTVVFSHSSIGWVSFHG-FLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNT----------IEKHKVTHT 353 (647)
T ss_pred HHHHHhcCCCCCcEEEEcCCCceEeeHH-HHHHHHhCCcEEEEeCCCCCCCCCchHHHHHH----------HHHhCeEEE
Confidence 3334445677789999999999987664 588999999999997651 2 4556666 677999999
Q ss_pred ccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCC-CCC
Q 013869 274 TGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GAR 352 (435)
Q Consensus 274 ~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~ 352 (435)
.++|++++.|++...... ......++++||.++++|+++++++.+.+.+.+++++++.||+||+++.++.... ...
T Consensus 354 ~~~P~~~~~l~~~~~~~~---~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~~~~ 430 (647)
T PTZ00237 354 LTLPKTIRYLIKTDPEAT---IIRSKYDLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYGHINI 430 (647)
T ss_pred EeCHHHHHHHHhhCcccc---ccccccCcchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCCCCCC
Confidence 999999999987421100 0012336789999999999999999999999999999999999999865443222 223
Q ss_pred CCCccceecCCCeEEEecCCCCCCCCc-cceEEEecC---CccccccCCchhccccccc-CCccccCceEEEcCCccEEE
Q 013869 353 KAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSP---SLFKEYWKLPKVTKDSFTA-DGFFKTGDTGKQDEDGYYII 427 (435)
Q Consensus 353 ~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~---~~~~gy~~~~~~~~~~~~~-~g~~~TGD~g~~~~dG~l~~ 427 (435)
..+++|+|+++++++|+|++|+.++.+ .|||++++| +++.||+++++.+.+.|.. +|||+|||+|++|+||++++
T Consensus 431 ~~~s~G~p~~g~~~~i~d~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i 510 (647)
T PTZ00237 431 PYNATGVPSIFIKPSILSEDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTI 510 (647)
T ss_pred CCCCCccCcCCceEEEECCCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEE
Confidence 347899999999999999999887665 799999986 7899999999998877754 79999999999999999999
Q ss_pred ecccccCC
Q 013869 428 LGRKGIYF 435 (435)
Q Consensus 428 ~gR~~d~i 435 (435)
+||+||+|
T Consensus 511 ~GR~dd~i 518 (647)
T PTZ00237 511 VSRSDDQI 518 (647)
T ss_pred EeccCCEE
Confidence 99999986
No 26
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=5.7e-56 Score=444.30 Aligned_cols=400 Identities=23% Similarity=0.343 Sum_probs=329.1
Q ss_pred ChHHHHHHHhcccCCCeeEEEeC--CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC
Q 013869 1 MEVFKAAYKKGSMARDSVAIRAD--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~ 78 (435)
+|+.+.+.+++.++|+++|+++. ++++||.||.++++++|++|.+. |+++||+|+++++|+
T Consensus 23 ~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~-----------------g~~~gd~V~i~~~~~ 85 (537)
T PLN02246 23 LPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKL-----------------GIRQGDVVMLLLPNC 85 (537)
T ss_pred CcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCC
Confidence 57889999999999999999974 57899999999999999999994 999999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCC-CCCccc-cc
Q 013869 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN-VSSETT-VF 156 (435)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~ 156 (435)
++++++++||+++|++++|+++.++.+++..+++.+++++++++....+.+..........+..+..... ...... ..
T Consensus 86 ~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 165 (537)
T PLN02246 86 PEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSELTQ 165 (537)
T ss_pred hHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHHHHhc
Confidence 9999999999999999999999999999999999999999999988877665544321111221111100 000000 00
Q ss_pred cchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHH----hccCCCCCeeEEeecchhhhHHHHHHHH
Q 013869 157 DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE----AWEYTSADQFLHCLPLHHVHGLFNALLA 232 (435)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~l~~~pl~~~~g~~~~~~~ 232 (435)
......+.....++++++++|||||||.||+|.++|+++...+..... .+.+.++++++..+|++|..++...++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~ 245 (537)
T PLN02246 166 ADENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLC 245 (537)
T ss_pred CCCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHH
Confidence 000001122345789999999999999999999999999887766544 4568899999999999999998777888
Q ss_pred HHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecC
Q 013869 233 PLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (435)
Q Consensus 233 ~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G 312 (435)
++..|+++++.+.+++..+++. ++++++|++.++|+++..|++..+ .....++++|.+++||
T Consensus 246 ~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~--------~~~~~~~~lr~~~~gg 307 (537)
T PLN02246 246 GLRVGAAILIMPKFEIGALLEL----------IQRHKVTIAPFVPPIVLAIAKSPV--------VEKYDLSSIRMVLSGA 307 (537)
T ss_pred HHhcCCEEEEeCCCCHHHHHHH----------HHHhCceEEEcchHHHHHHhcCcc--------ccccCccceeEEEEec
Confidence 9999999999999998888888 666899999999999999986532 1223568899999999
Q ss_pred CCCCHHHHHHHHHHh-CCcccccccCccccchhccCC-----CCCCCCCccceecCCCeEEEecC-CCCCCCCc-cceEE
Q 013869 313 SALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL-----RGARKAGTVGNPLPGVQVKIAED-ESGSDAAG-VGEIC 384 (435)
Q Consensus 313 ~~l~~~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~-----~~~~~~~~~G~p~~~~~~~i~d~-~~~~~~~~-~Gel~ 384 (435)
+++++++.+.|.+.+ +..+++.||+||++.+++... .....++++|+|+++++++|+|+ .+..++.+ .|||+
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~ 387 (537)
T PLN02246 308 APLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEIC 387 (537)
T ss_pred CcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEE
Confidence 999999999999998 678999999999986654321 11234568999999999999994 56666665 79999
Q ss_pred EecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 385 VKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 385 v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++|+.++.||+++++.+...++.+|||+|||+|++++||++++.||.+|+|
T Consensus 388 v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i 438 (537)
T PLN02246 388 IRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELI 438 (537)
T ss_pred EECCchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceE
Confidence 999999999999999999999889999999999999999999999999975
No 27
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.7e-56 Score=443.27 Aligned_cols=395 Identities=19% Similarity=0.279 Sum_probs=324.6
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.+.|.++++++|+++|+++.++++||+||.++++++|++|.+. |+++|++|+++++|++++
T Consensus 44 ~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~-----------------g~~~g~~V~i~~~n~~~~ 106 (537)
T PRK13382 44 GPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQAL-----------------PIGEPRVVGIMCRNHRGF 106 (537)
T ss_pred CHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEecCcHHH
Confidence 578889999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC--ccccCCCCCCCCCccccccch
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPNVSSETTVFDQS 159 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 159 (435)
++.+|||+++|++++|+++.++.+++.++++++++++++++.+....+.......+. ....+................
T Consensus 107 ~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (537)
T PRK13382 107 VEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAAH 186 (537)
T ss_pred HHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhcc
Confidence 999999999999999999999999999999999999999998877665543322111 111110100000000000000
Q ss_pred hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCE
Q 013869 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (435)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (435)
. ........++.++++|||||||.||+|.++|++++.........+.+..+++++...|++|..++. .++.++..|++
T Consensus 187 ~-~~~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~-~~~~~l~~g~~ 264 (537)
T PRK13382 187 A-GQRPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFS-QLVLAASLACT 264 (537)
T ss_pred C-cCCCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHH-HHHHHHhcCcE
Confidence 0 001123468899999999999999999999999888888877788888999999999999999985 68899999999
Q ss_pred EEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHH
Q 013869 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (435)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l 319 (435)
+++.+.+++..+++. ++++++|++.++|+++..+++.... .....+++++|.+++||+++++++
T Consensus 265 ~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~i~~gG~~l~~~~ 328 (537)
T PRK13382 265 IVTRRRFDPEATLDL----------IDRHRATGLAVVPVMFDRIMDLPAE------VRNRYSGRSLRFAAASGSRMRPDV 328 (537)
T ss_pred EEECCCcCHHHHHHH----------HHHhCCEEEEehHHHHHHHHcCCch------hcccCCccceeEEEEcCCCCCHHH
Confidence 999999999998888 5669999999999999999875321 111234578999999999999999
Q ss_pred HHHHHHHhCCcccccccCccccchhccCCC-CCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccccCC
Q 013869 320 MQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKL 397 (435)
Q Consensus 320 ~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~ 397 (435)
++.|.+.++.++++.||+||++.+++.... .....+++|+|+++++++|+|++++..+.+ .|||+++|+.++.||+
T Consensus 329 ~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~GEl~v~g~~~~~gY~-- 406 (537)
T PRK13382 329 VIAFMDQFGDVIYNNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILDQDFREVPTGEVGTIFVRNDTQFDGYT-- 406 (537)
T ss_pred HHHHHHHcCCcEEecccccccCcceecChhHhccCCCCccccCcCcEEEEECCCCCCCCCCCeeEEEEEcCCcccCcc--
Confidence 999999999999999999999876653322 234567999999999999999998887777 6999999999999998
Q ss_pred chhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 398 PKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 398 ~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++.+.. + .+|||+|||++++++||++++.||+||+|
T Consensus 407 ~~~~~~-~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~i 442 (537)
T PRK13382 407 SGSTKD-F-HDGFMASGDVGYLDENGRLFVVGRDDEMI 442 (537)
T ss_pred ccchhh-c-cCCCEeeCceEEEeCCCcEEEecccccee
Confidence 444443 3 27999999999999999999999999986
No 28
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.6e-56 Score=445.93 Aligned_cols=400 Identities=25% Similarity=0.400 Sum_probs=324.8
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
|+.+.|.+.++++|+++|++..++.+||+||.++++++|+.|.+. .|+++||+|+++++|++++
T Consensus 25 ~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~----------------~gi~~gd~Vai~~~n~~~~ 88 (562)
T PRK05677 25 NIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQH----------------TDLKPGDRIAVQLPNVLQY 88 (562)
T ss_pred cHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 688999999999999999999999999999999999999999863 3999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCC------------
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV------------ 149 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 149 (435)
++++|||+++|++++|+++.++.+++.+++++++++++|++.+....+.............+......
T Consensus 89 ~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (562)
T PRK05677 89 PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAV 168 (562)
T ss_pred HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccc
Confidence 99999999999999999999999999999999999999998877665544432211111111000000
Q ss_pred -------------CCcccccc-----chhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhcc--CC
Q 013869 150 -------------SSETTVFD-----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YT 209 (435)
Q Consensus 150 -------------~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~ 209 (435)
.......+ ...........++++++++|||||||.||+|.++|+++..........+. +.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~ 248 (562)
T PRK05677 169 VKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLN 248 (562)
T ss_pred hhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCC
Confidence 00000000 00001112345789999999999999999999999999887766555443 33
Q ss_pred C-CCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC-CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhh
Q 013869 210 S-ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGY 287 (435)
Q Consensus 210 ~-~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 287 (435)
. .+++++.+|++|..++...++.++..|++.++.+ ++++..+++. ++++++|++.++|+++..+++..
T Consensus 249 ~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~ 318 (562)
T PRK05677 249 EGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKE----------LGKWKFSGFVGLNTLFVALCNNE 318 (562)
T ss_pred CCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHH----------HHHcCceEEecHHHHHHHHHhCc
Confidence 2 3688999999999998767788888888776665 4677777777 66799999999999999887642
Q ss_pred ccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEE
Q 013869 288 EAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVK 367 (435)
Q Consensus 288 ~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 367 (435)
. .....++++|.+++||+++++++++.|.+.+++++++.||+||++.+++.......+.+++|+|+++++++
T Consensus 319 ~--------~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~~~~v~ 390 (562)
T PRK05677 319 A--------FRKLDFSALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQAIQVGTIGIPVPSTLCK 390 (562)
T ss_pred c--------cccCChhhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccccCcceeecCccCCCCCccCccCCCCEEE
Confidence 1 11234678999999999999999999999999999999999999876654433344567899999999999
Q ss_pred EecCCCCCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 368 IAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 368 i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|+|+++..++.+ .|||+++|+.++.||+++++.+.+.|.++|||+|||+|++|+||.+++.||.+|+|
T Consensus 391 i~d~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i 459 (562)
T PRK05677 391 VIDDDGNELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMI 459 (562)
T ss_pred EECCCCCCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeE
Confidence 999988887776 79999999999999999999999999889999999999999999999999999975
No 29
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-55 Score=438.46 Aligned_cols=391 Identities=26% Similarity=0.431 Sum_probs=330.7
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
.+.+.|.++|+.+||++|+++.++.+||+||+++++++|.+|++. .|+++|++|+++++|++++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~----------------~g~~~~~~V~i~~~~~~~~ 66 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYE----------------LNVKKGERIAILSQNSLEY 66 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 467889999999999999999999999999999999999999863 5899999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC-ccccCCCCCCCCCccccccchh
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-KFSLIPPVPNVSSETTVFDQSQ 160 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
+++++||+++|++++|+++.++.+++..+++.++++.++++++..+.+......... ....+....... .. .
T Consensus 67 ~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~ 139 (496)
T PRK06839 67 IVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISITSLKEIE------DR-K 139 (496)
T ss_pred HHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEecchHhhh------cc-C
Confidence 999999999999999999999999999999999999999999887766554433211 111111110000 00 0
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEE
Q 013869 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (435)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~ 240 (435)
........++++++++|||||||.||+|.++|+++..+.......+++..+++++..+|++|..++...++.++..|+++
T Consensus 140 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~ 219 (496)
T PRK06839 140 IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVI 219 (496)
T ss_pred CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEE
Confidence 01122345689999999999999999999999998877776677778899999999999999999877778899999999
Q ss_pred EEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHH
Q 013869 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (435)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~ 320 (435)
++++.+++..+++. ++++++|++.++|++++.+++.... ...+++++|.+++||+++++++.
T Consensus 220 ~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~--------~~~~~~~lr~~~~gG~~~~~~~~ 281 (496)
T PRK06839 220 IVPRKFEPTKALSM----------IEKHKVTVVMGVPTIHQALINCSKF--------ETTNLQSVRWFYNGGAPCPEELM 281 (496)
T ss_pred EEccCCCHHHHHHH----------HHhhCCeEEEehHHHHHHHHhCccc--------ccCCCcccceEEECCCCCCHHHH
Confidence 99999999998888 6669999999999999999876322 22357899999999999999999
Q ss_pred HHHHHHhCCcccccccCccccchhccCC--CCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccccCC
Q 013869 321 QQWETITGHRLLERYGMTEFVMAISNPL--RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKL 397 (435)
Q Consensus 321 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~--~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~ 397 (435)
+.|.+. ++++.+.||+||++.+++... ......+++|+|+++++++|+|+++..++.+ .|||+++|+.++.||+++
T Consensus 282 ~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~ 360 (496)
T PRK06839 282 REFIDR-GFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNR 360 (496)
T ss_pred HHHHHh-CCeeEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCCCceEEEEECCCcchhhcCC
Confidence 999987 899999999999986544222 2234567899999999999999988887666 799999999999999999
Q ss_pred chhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 398 PKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 398 ~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++.+...+ .+|||+|||+|+++++|++++.||.+|+|
T Consensus 361 ~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~d~i 397 (496)
T PRK06839 361 PDATEETI-QDGWLCTGDLARVDEDGFVYIVGRKKEMI 397 (496)
T ss_pred hHHHHHHH-cCCCeeecceEEEcCCCcEEEeccccceE
Confidence 99988777 48999999999999999999999999975
No 30
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=9.2e-56 Score=449.66 Aligned_cols=399 Identities=19% Similarity=0.243 Sum_probs=313.5
Q ss_pred HHHHHHhcccCCCeeEEEe------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCC
Q 013869 4 FKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (435)
Q Consensus 4 ~~~~~~~~~~~p~~~al~~------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~ 77 (435)
+++|.++++.+|+++|+++ ..+++||+||.++++++|++|++ +|+++||+|+++++|
T Consensus 55 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~Gd~V~i~~~n 117 (628)
T TIGR02316 55 HNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRA-----------------LGVGRGDRVLIYMPM 117 (628)
T ss_pred HHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCC
Confidence 5678888888999999997 24689999999999999999999 499999999999999
Q ss_pred CHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhh---------HHHHHHHHhcc---CCccccCCC
Q 013869 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKS---GAKFSLIPP 145 (435)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~---~~~~~~~~~ 145 (435)
+++++++++||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+....... ...+..+..
T Consensus 118 ~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~ 197 (628)
T TIGR02316 118 IAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDR 197 (628)
T ss_pred CHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999998642 22232222211 111221111
Q ss_pred CC-CC---C-Ccccccc---ch--hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHH-HHHHHHhccCCCCCee
Q 013869 146 VP-NV---S-SETTVFD---QS--QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQ-VQMLTEAWEYTSADQF 214 (435)
Q Consensus 146 ~~-~~---~-~~~~~~~---~~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~ 214 (435)
.. .. . ......+ .. ...+.....++++++|+|||||||.||||.++|.++... .......+++.++|++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~ 277 (628)
T TIGR02316 198 GLAPMRLIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVM 277 (628)
T ss_pred CCCCcCcccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEE
Confidence 00 00 0 0000000 00 001111246789999999999999999999999997543 4445556788999999
Q ss_pred EEeecchhhhHHHHHHHHHHHcCCEEEEcCC----cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccc
Q 013869 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (435)
Q Consensus 215 l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 290 (435)
++..|++|..++...++.+|..|+++++.+. +++..+++. ++++++|+++.+|++++.|.+....
T Consensus 278 ~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~- 346 (628)
T TIGR02316 278 FSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSI----------VERYGVRTMFSAPTAIRVLKKQDAA- 346 (628)
T ss_pred EEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHH----------HHHhCCeEEEeCHHHHHHHHhcCCc-
Confidence 9999999999876679999999999999874 356667777 6779999999999999988764221
Q ss_pred cHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCC----CCCCCCccceecCCCeE
Q 013869 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR----GARKAGTVGNPLPGVQV 366 (435)
Q Consensus 291 ~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~----~~~~~~~~G~p~~~~~~ 366 (435)
.....++++||.+++||+++++++.+.+.+.++.++++.||+||++..++.... .....+++|+|++|+++
T Consensus 347 -----~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v 421 (628)
T TIGR02316 347 -----WLRKHDLSSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHL 421 (628)
T ss_pred -----ccccCCccceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceE
Confidence 123346899999999999999999999999999999999999999854332211 12345789999999999
Q ss_pred EEecC-CCCCCCCc-cceEEEecC---CccccccCCchhccccc---ccCCccccCceEEEcCCccEEEecccccCC
Q 013869 367 KIAED-ESGSDAAG-VGEICVKSP---SLFKEYWKLPKVTKDSF---TADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 367 ~i~d~-~~~~~~~~-~Gel~v~~~---~~~~gy~~~~~~~~~~~---~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+|+|+ +++.++.+ .|||+++|| ..+.||+++++.+.+.+ ..++||+|||+|++|+||+++++||.||+|
T Consensus 422 ~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~i 498 (628)
T TIGR02316 422 RVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVI 498 (628)
T ss_pred EEEECCCCCCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceE
Confidence 99997 67777665 799999998 56799999987776654 246799999999999999999999999986
No 31
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.1e-55 Score=443.85 Aligned_cols=394 Identities=24% Similarity=0.343 Sum_probs=318.4
Q ss_pred HHHHHHHhcccCCCeeEEEeCC--cccCHHHHHHHHHHHHHHHhh-CCCCCccccccccccccccCCCCCeEEEEeCCCH
Q 013869 3 VFKAAYKKGSMARDSVAIRADQ--KSYSYDQLASSALRISSLLCS-NDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (435)
Q Consensus 3 i~~~~~~~~~~~p~~~al~~~~--~~~Ty~el~~~~~~la~~L~~-~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~ 79 (435)
+.+.+... ..+|+++|+++.. .++||+||.++++++|++|.+ . |+++||+|+++++|++
T Consensus 42 ~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~-----------------G~~~gd~V~i~~~n~~ 103 (560)
T PLN02574 42 AVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVM-----------------GVRQGDVVLLLLPNSV 103 (560)
T ss_pred HHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCcc
Confidence 34455554 6789999999853 479999999999999999998 5 9999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCC-------CCc
Q 013869 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV-------SSE 152 (435)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 152 (435)
++++++|||+++|++++|++|.++.+++.++++.+++++++++++..+.+... ...+..+...... ...
T Consensus 104 ~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 179 (560)
T PLN02574 104 YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL----GVPVIGVPENYDFDSKRIEFPKF 179 (560)
T ss_pred hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc----CCcEEecCcccccccCccCcccH
Confidence 99999999999999999999999999999999999999999998876655432 1111111100000 000
Q ss_pred cccc-cchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh----ccC-CCCCeeEEeecchhhhHH
Q 013869 153 TTVF-DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA----WEY-TSADQFLHCLPLHHVHGL 226 (435)
Q Consensus 153 ~~~~-~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~----~~~-~~~~~~l~~~pl~~~~g~ 226 (435)
.... ............++++++++|||||||.||+|.++|+++...+..+... ... ...++++..+|++|..++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~ 259 (560)
T PLN02574 180 YELIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGL 259 (560)
T ss_pred HHHhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHH
Confidence 0000 0000111223457899999999999999999999999998877765432 222 356788999999999998
Q ss_pred HHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccE
Q 013869 227 FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLR 306 (435)
Q Consensus 227 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr 306 (435)
...++.++..|+++++.+.+++..+++. +++|++|++.++|+++..+++.... ....+++++|
T Consensus 260 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~-------~~~~~~~~lr 322 (560)
T PLN02574 260 SLFVVGLLSLGSTIVVMRRFDASDMVKV----------IDRFKVTHFPVVPPILMALTKKAKG-------VCGEVLKSLK 322 (560)
T ss_pred HHHHHHHHhcCCEEEEecCCCHHHHHHH----------HHHcCCeEEecCCHHHHHHHhCccc-------cccCccccce
Confidence 7777888899999999999999998888 6669999999999999999875321 1234578999
Q ss_pred EEEecCCCCCHHHHHHHHHHh-CCcccccccCccccchhccC--CCCCCCCCccceecCCCeEEEec-CCCCCCCCc-cc
Q 013869 307 LMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNP--LRGARKAGTVGNPLPGVQVKIAE-DESGSDAAG-VG 381 (435)
Q Consensus 307 ~i~~~G~~l~~~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~--~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~~-~G 381 (435)
.+++||++++++++++|.+.+ ++++++.||+||++.+++.. ........++|+|.++++++|+| +++...+.+ .|
T Consensus 323 ~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~G 402 (560)
T PLN02574 323 QVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCG 402 (560)
T ss_pred EEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCe
Confidence 999999999999999999988 68999999999998655422 12224567899999999999999 667776666 79
Q ss_pred eEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 382 EICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 382 el~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|||++|++++.||+++++.+.+.|+.+|||+|||+|++|+||++++.||.+|+|
T Consensus 403 ei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i 456 (560)
T PLN02574 403 ELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEII 456 (560)
T ss_pred EEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhhe
Confidence 999999999999999999999999889999999999999999999999999986
No 32
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5.2e-56 Score=451.64 Aligned_cols=404 Identities=23% Similarity=0.315 Sum_probs=306.2
Q ss_pred hHHHHHHHhcccCCCeeEEEeC----C-----cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 013869 2 EVFKAAYKKGSMARDSVAIRAD----Q-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~----~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (435)
|+.++|.+.++++|+++|+... + +.+||+|+.++++++|++|.+ .|+++||+|+
T Consensus 43 t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~gd~V~ 105 (660)
T PLN02430 43 TAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRA-----------------SGAEPGSRVG 105 (660)
T ss_pred CHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 6889999999999999999642 1 247999999999999999999 4999999999
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHH-HHHHHHhccCC--ccccCCCCCCC
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE-VLQNVASKSGA--KFSLIPPVPNV 149 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~ 149 (435)
|+++|+++|++++|||+++|+++||+++.++++++.++++.++++++|++..... .+.......+. .++.+......
T Consensus 106 i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~ 185 (660)
T PLN02430 106 IYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEE 185 (660)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChH
Confidence 9999999999999999999999999999999999999999999999999876432 22221111111 11111110000
Q ss_pred C------Ccc---ccccch-----hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh-----ccCCC
Q 013869 150 S------SET---TVFDQS-----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA-----WEYTS 210 (435)
Q Consensus 150 ~------~~~---~~~~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~-----~~~~~ 210 (435)
. ... ...+.. .........++++++++|||||||.||||.+||+++...+...... .++.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~ 265 (660)
T PLN02430 186 ESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTH 265 (660)
T ss_pred HhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCC
Confidence 0 000 000000 0011123457899999999999999999999999998877665432 14678
Q ss_pred CCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccc
Q 013869 211 ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (435)
Q Consensus 211 ~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 290 (435)
.|++++++|++|.++... .+.++..|+++++... ++..+++. +.+++||++.++|.+|+.+.+.....
T Consensus 266 ~d~~ls~lPl~H~~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~----------l~~~~pt~~~~vP~~~~~l~~~i~~~ 333 (660)
T PLN02430 266 DDVYLSFLPLAHILDRMI-EEYFFRKGASVGYYHG-DLNALRDD----------LMELKPTLLAGVPRVFERIHEGIQKA 333 (660)
T ss_pred CCEEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC-ChhhHHHH----------HHHhCCcEEEecHHHHHHHHHHHHHH
Confidence 899999999999999875 5567899999988654 56666666 56689999999999999887643211
Q ss_pred cHH-------------------------------------HHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccc
Q 013869 291 DTE-------------------------------------LQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLE 333 (435)
Q Consensus 291 ~~~-------------------------------------~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~ 333 (435)
... ..+......+++|.+++||+++++++.+.++...+..+++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~ 413 (660)
T PLN02430 334 LQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQ 413 (660)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeee
Confidence 000 0000011126899999999999999866555443468999
Q ss_pred cccCccccchhccC-CCCCCCCCccceecCCCeEEEecC--CCCC-CCC-ccceEEEecCCccccccCCchhcccccccC
Q 013869 334 RYGMTEFVMAISNP-LRGARKAGTVGNPLPGVQVKIAED--ESGS-DAA-GVGEICVKSPSLFKEYWKLPKVTKDSFTAD 408 (435)
Q Consensus 334 ~YG~tE~~~~~~~~-~~~~~~~~~~G~p~~~~~~~i~d~--~~~~-~~~-~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 408 (435)
.||+||+++.++.. .......+++|+|.++++++++|. .+.. .+. ..|||+++|++++.||+++|+.|.+.| .+
T Consensus 414 ~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~-~d 492 (660)
T PLN02430 414 GYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVM-KD 492 (660)
T ss_pred ecchhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhh-hc
Confidence 99999998655433 222345689999999999999872 2322 222 269999999999999999999999998 58
Q ss_pred CccccCceEEEcCCccEEEecccccCC
Q 013869 409 GFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 409 g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|||+|||+|++|+||+|++.||++|+|
T Consensus 493 Gw~~TGDig~~d~dG~l~i~gR~kd~i 519 (660)
T PLN02430 493 GWFHTGDIGEILPNGVLKIIDRKKNLI 519 (660)
T ss_pred cceeccceEEECCCCcEEEEEcccccE
Confidence 999999999999999999999999986
No 33
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=2.4e-55 Score=436.93 Aligned_cols=396 Identities=35% Similarity=0.571 Sum_probs=333.0
Q ss_pred hHHHHHHHhcccCCCeeEEEe-CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~-~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
++.+.|.+++ .+|+++|+.. +++.+||+||.++++++|.+|++. |+++||+|+++++|+++
T Consensus 4 ~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~-----------------g~~~gd~v~i~~~~~~e 65 (504)
T PRK07514 4 NLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVAL-----------------GVKPGDRVAVQVEKSPE 65 (504)
T ss_pred cHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 5788899999 9999999997 678999999999999999999994 99999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCc-cccCCCCCCCCCccccccch
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPNVSSETTVFDQS 159 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 159 (435)
++++++||+++|++++|+++..+.+++..+++.++++++++++...+.+.......... +..+................
T Consensus 66 ~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (504)
T PRK07514 66 ALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAAAAAP 145 (504)
T ss_pred HHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhhhhcC
Confidence 99999999999999999999999999999999999999999988777665544332221 11111100000000000000
Q ss_pred hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCE
Q 013869 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (435)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (435)
..........+++++++|||||||.||+|.++|+++...+......+++.+++++++.+|++|..+++..++.++..|++
T Consensus 146 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 225 (504)
T PRK07514 146 DDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGAS 225 (504)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcE
Confidence 11112345678999999999999999999999999999988888888899999999999999999988788899999999
Q ss_pred EEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHH
Q 013869 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (435)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l 319 (435)
+++.+.+++..+++.+ .++|++.++|.++..+++... .....++++|.++.||+++++++
T Consensus 226 ~~~~~~~~~~~~~~~i------------~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~lr~~~~gg~~~~~~~ 285 (504)
T PRK07514 226 MIFLPKFDPDAVLALM------------PRATVMMGVPTFYTRLLQEPR--------LTREAAAHMRLFISGSAPLLAET 285 (504)
T ss_pred EEECCCCCHHHHHHHH------------HhheeeecHHHHHHHHHcCCC--------CCcccccceeeEEecCCCCCHHH
Confidence 9999998888888874 379999999999999987522 12235688999999999999999
Q ss_pred HHHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEec-CCCCCCCCc-cceEEEecCCccccccCC
Q 013869 320 MQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAE-DESGSDAAG-VGEICVKSPSLFKEYWKL 397 (435)
Q Consensus 320 ~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~~-~Gel~v~~~~~~~gy~~~ 397 (435)
.+.|.+.++.++++.||+||++..............++|.|+++++++|+| ++++.++.+ .|||+++|+.++.||+++
T Consensus 286 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~ 365 (504)
T PRK07514 286 HREFQERTGHAILERYGMTETNMNTSNPYDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRM 365 (504)
T ss_pred HHHHHHHhCCcceeecccccccccccCCccccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCC
Confidence 999999999999999999999876654443344567899999999999999 777777776 699999999999999999
Q ss_pred chhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 398 PKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 398 ~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++.+.+.|..+|||+|||+|+++++|++++.||.+|+|
T Consensus 366 ~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i 403 (504)
T PRK07514 366 PEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLI 403 (504)
T ss_pred chhhhhhcccCCCeeecceEEEcCCccEEEeccccceE
Confidence 99999999888999999999999999999999999975
No 34
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-55 Score=449.38 Aligned_cols=399 Identities=22% Similarity=0.334 Sum_probs=316.3
Q ss_pred HHHHHHhcccCCCeeEEEeCC------cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCC
Q 013869 4 FKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (435)
Q Consensus 4 ~~~~~~~~~~~p~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~ 77 (435)
.+.|.++++++|+++|++..+ +++||+||.+++.++|++|++. |+++||+|+++++|
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~-----------------Gv~~gd~V~i~~~n 132 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSL-----------------GVKKGDRVAIYMPM 132 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcCC
Confidence 456778888999999999633 4799999999999999999994 99999999999999
Q ss_pred CHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhH---------HHHHHHHhccCC--ccccCCCC
Q 013869 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR---------EVLQNVASKSGA--KFSLIPPV 146 (435)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~--~~~~~~~~ 146 (435)
++++++++|||+++|++++|+++.++.+++.++++.++++++|+++... +.+.......+. .+..+...
T Consensus 133 ~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (637)
T PRK00174 133 IPEAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRT 212 (637)
T ss_pred CHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCC
Confidence 9999999999999999999999999999999999999999999986532 222222221111 11111100
Q ss_pred C-CCC--C--c---cc-cccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHH-HHHhccCCCCCeeEE
Q 013869 147 P-NVS--S--E---TT-VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM-LTEAWEYTSADQFLH 216 (435)
Q Consensus 147 ~-~~~--~--~---~~-~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~l~ 216 (435)
. ... . . .. ........+......+++++++|||||||.||+|.++|++++.+... ....+++.++|++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~ 292 (637)
T PRK00174 213 GGDVDWVEGRDLWWHELVAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWC 292 (637)
T ss_pred CCCcCcCCCCcccHHHHHhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEE
Confidence 0 000 0 0 00 00000011122456789999999999999999999999998655443 344568888999999
Q ss_pred eecchhhhHHHHHHHHHHHcCCEEEEcCC----cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccH
Q 013869 217 CLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDT 292 (435)
Q Consensus 217 ~~pl~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 292 (435)
..|++|..+....++.++..|+++++.+. +++..+++. ++++++|++.++|++++.|++.....
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~~-- 360 (637)
T PRK00174 293 TADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEV----------IDKHKVTIFYTAPTAIRALMKEGDEH-- 360 (637)
T ss_pred cCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHH----------HHhcCCeEEeecHHHHHHHHhcCCcc--
Confidence 99999999887779999999999999763 366777777 67799999999999999998753221
Q ss_pred HHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhC---CcccccccCccccchhccCCC--CCCCCCccceecCCCeEE
Q 013869 293 ELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG---HRLLERYGMTEFVMAISNPLR--GARKAGTVGNPLPGVQVK 367 (435)
Q Consensus 293 ~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~---~~l~~~YG~tE~~~~~~~~~~--~~~~~~~~G~p~~~~~~~ 367 (435)
....++++||.++++|+++++++++.+.+.++ +++++.||+||++..++.... ...+.+++|+|++|++++
T Consensus 361 ----~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~ 436 (637)
T PRK00174 361 ----PKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPA 436 (637)
T ss_pred ----cccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEE
Confidence 12245789999999999999999999998885 789999999999875543322 123467899999999999
Q ss_pred EecCCCCCCCCc-cceEEEec--CCccccccCCchhcccccc--cCCccccCceEEEcCCccEEEecccccCC
Q 013869 368 IAEDESGSDAAG-VGEICVKS--PSLFKEYWKLPKVTKDSFT--ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 368 i~d~~~~~~~~~-~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|+|++++.++.+ .|||+++| |+++.||+++++.+.+.+. .+|||+|||+|++|+||++++.||+||+|
T Consensus 437 i~d~~g~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~i 509 (637)
T PRK00174 437 VVDEEGNPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVL 509 (637)
T ss_pred EECCCCCCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEE
Confidence 999999888766 79999999 6899999999988777652 37899999999999999999999999986
No 35
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-55 Score=454.94 Aligned_cols=381 Identities=21% Similarity=0.291 Sum_probs=313.8
Q ss_pred hHHHHHHHhccc--CCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH
Q 013869 2 EVFKAAYKKGSM--ARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (435)
Q Consensus 2 ~i~~~~~~~~~~--~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~ 79 (435)
|+.+.|.+++.. +||++|++.. ..+||+||+++++++|++|.+. |+++|++|+|+++|++
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~~-----------------g~~~g~~V~i~~~~~~ 66 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRNR-----------------GLSSGDRVLLCLPDSP 66 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCH
Confidence 577888888875 7999999875 4899999999999999999994 9999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccch
Q 013869 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQS 159 (435)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (435)
+++++++||+++|++++|++|.++.+++.++++.+++++++++.+....+... .+... ..... .... .
T Consensus 67 ~~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------~~~~~---~~~~~--~~~~-~ 134 (705)
T PRK06060 67 DLVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS------RVAEA---AELMS--EAAR-V 134 (705)
T ss_pred HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc------ccchh---hhhhh--hccc-c
Confidence 99999999999999999999999999999999999999999988765433211 00000 00000 0000 0
Q ss_pred hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHH-HhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCC
Q 013869 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT-EAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGA 238 (435)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~ 238 (435)
.........++++++++|||||||.||+|.++|+++...+.... ..+++.+.++++...|++|..++...++.++..|+
T Consensus 135 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~ 214 (705)
T PRK06060 135 APGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGG 214 (705)
T ss_pred CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCC
Confidence 00011234568999999999999999999999999988776654 45788899999999999999887667889999999
Q ss_pred EEEEcC-CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCH
Q 013869 239 TVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (435)
Q Consensus 239 ~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~ 317 (435)
++++.+ .+++...+.. +.++++|++.++|+++..+++... ...++++|.+++||+++++
T Consensus 215 ~~v~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~l~~l~~~~~----------~~~~~slr~i~~gGe~l~~ 274 (705)
T PRK06060 215 SAVINSAPVTPEAAAIL----------SARFGPSVLYGVPNFFARVIDSCS----------PDSFRSLRCVVSAGEALEL 274 (705)
T ss_pred EEEEeCCCCCHHHHHHH----------HHhcCCeEEeeHHHHHHHHHHhcc----------cccccceeEEEEecCcCCH
Confidence 999987 4566666555 667999999999999999886422 2346889999999999999
Q ss_pred HHHHHHHHHh-CCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCcccccc
Q 013869 318 PVMQQWETIT-GHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYW 395 (435)
Q Consensus 318 ~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~ 395 (435)
++.+.|.+.+ +.++++.||+||++.++...........++|+|+++++++|+|++++.++.+ .||||++|++++.||+
T Consensus 275 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~GEl~i~g~~v~~GY~ 354 (705)
T PRK06060 275 GLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVDEWRLGTLGRVLPPYEIRVVAPDGTTAGPGVEGDLWVRGPAIAKGYW 354 (705)
T ss_pred HHHHHHHHHcCCCceEeeeeccccCceEEeccCCCCCcCcccccCCCcEEEEECCCCCCCCCCCceEEEEccchhhhhhh
Confidence 9999999998 4899999999999865443322234567899999999999999998887776 7999999999999999
Q ss_pred CCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 396 KLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 396 ~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++++.+. ..+|||+|||+|++++||++++.||.||+|
T Consensus 355 ~~~~~~~---~~~~~~~TGDl~~~~~dG~l~~~GR~dd~i 391 (705)
T PRK06060 355 NRPDSPV---ANEGWLDTRDRVCIDSDGWVTYRCRADDTE 391 (705)
T ss_pred CCCcccc---cCCCcEECCeeEEECCCceEEEecccCceE
Confidence 9988653 357999999999999999999999999985
No 36
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=2.9e-55 Score=438.24 Aligned_cols=400 Identities=21% Similarity=0.282 Sum_probs=328.4
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+++.++|.++++++|+++|+++.++++||+||.++++++|.+|.+ .|+++|++|+++++|+++
T Consensus 23 ~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~g~~V~i~~~~~~~ 85 (527)
T TIGR02275 23 KPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTK-----------------LGIGQGDTAVVQLPNIAE 85 (527)
T ss_pred CcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCcHH
Confidence 367899999999999999999999999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHH-----HHHHHHhccCC-ccccCCCCCC-CC-Cc
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE-----VLQNVASKSGA-KFSLIPPVPN-VS-SE 152 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~-~~-~~ 152 (435)
++++++||+++|++++++++..+.+++.++++.++++.++++..... .........+. ....+..... .. ..
T Consensus 86 ~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (527)
T TIGR02275 86 FYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELF 165 (527)
T ss_pred HHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhh
Confidence 99999999999999999999999999999999999999999865321 11222111111 1111100000 00 00
Q ss_pred cccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHH-HHH
Q 013869 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN-ALL 231 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~-~~~ 231 (435)
................++++++++|||||||.||+|.++|+++..++......+.+..+++++..+|++|.+++.. .++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~ 245 (527)
T TIGR02275 166 LWLESPAEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGAL 245 (527)
T ss_pred HHhhCcCccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHH
Confidence 0000000111123456789999999999999999999999999999888888888999999999999999998764 478
Q ss_pred HHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEec
Q 013869 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (435)
Q Consensus 232 ~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~ 311 (435)
.++..|+++++.+.+++..++.. ++++++|++.++|.++..+++..+. ....++++|.+++|
T Consensus 246 ~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~~--------~~~~~~~lr~~~~g 307 (527)
T TIGR02275 246 GVFYAGGCVVLAPDPSPTDCFPL----------IERHKVTVTALVPPAVALWMQAASK--------SRYDLSSLKLLQVG 307 (527)
T ss_pred HHHhcCCeEEECCCCCHHHHHHH----------HHHhCCeEEEecHHHHHHHHhCccc--------cCCCccceEEEEEc
Confidence 89999999999998888888887 6669999999999999998876432 22356889999999
Q ss_pred CCCCCHHHHHHHHHHhCCcccccccCccccchhccC-CCCCCCCCccceec-CCCeEEEecCCCCCCCCc-cceEEEecC
Q 013869 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPL-PGVQVKIAEDESGSDAAG-VGEICVKSP 388 (435)
Q Consensus 312 G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~-~~~~~~~~~~G~p~-~~~~~~i~d~~~~~~~~~-~Gel~v~~~ 388 (435)
|++++.++.+.+.+.++.++++.||+||++...... ........++|+|+ ++++++++|++++..+.+ .|||+++|+
T Consensus 308 G~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~Gei~v~g~ 387 (527)
T TIGR02275 308 GAKFSEAAARRVPAVFGCQLQQVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGETGMLLTRGP 387 (527)
T ss_pred CCCCCHHHHHHHHHHhCCeEEeeeccCccCccccCCCCccccccccCCCCCCCCceEEEECCCCCCCCCCCceEEEecCC
Confidence 999999999999999999999999999965433321 11223456889999 589999999988877666 799999999
Q ss_pred CccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 389 SLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 389 ~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
.++.||+++++.+...|+++|||+|||+|++++||++++.||.+|+|
T Consensus 388 ~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i 434 (527)
T TIGR02275 388 YTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQI 434 (527)
T ss_pred ccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEeccccee
Confidence 99999999999999999889999999999999999999999999976
No 37
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=7.4e-56 Score=456.47 Aligned_cols=394 Identities=25% Similarity=0.367 Sum_probs=312.8
Q ss_pred ChHHHHHHHhcccCCC-eeEEEeC-CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC
Q 013869 1 MEVFKAAYKKGSMARD-SVAIRAD-QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~-~~al~~~-~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~ 78 (435)
.|+.+.|.++++++|+ ++|+.+. .+.+||+||.++++++|++|.+ .+++||+|+++++|+
T Consensus 204 ~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~------------------~~~~gd~Val~~~n~ 265 (718)
T PRK08043 204 ETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEK------------------YSVEGERIGLMLPNA 265 (718)
T ss_pred CCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHH------------------hcCCCceEEEEcCCc
Confidence 3678999999999998 6888763 4789999999999999999988 358999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHH--HHHhccCC-ccccCCCCCCCCCcccc
Q 013869 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ--NVASKSGA-KFSLIPPVPNVSSETTV 155 (435)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~ 155 (435)
+++++++|||+++|++++|+++.++.+++.++++.+++++++++.+..+... ........ ....+............
T Consensus 266 ~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 345 (718)
T PRK08043 266 TISAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTADK 345 (718)
T ss_pred HHHHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhHH
Confidence 9999999999999999999999999999999999999999999987654311 01111100 11111100000000000
Q ss_pred ----ccc-hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHH
Q 013869 156 ----FDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (435)
Q Consensus 156 ----~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~ 230 (435)
.+. ..........++++++++|||||||.||+|.++|+++.+.+......+++.++|++++.+|++|..++...+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~ 425 (718)
T PRK08043 346 LWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGL 425 (718)
T ss_pred HHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHH
Confidence 000 000111234678999999999999999999999999999888888888899999999999999999987778
Q ss_pred HHHHHcCCEEEEcCC-cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEE
Q 013869 231 LAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (435)
Q Consensus 231 ~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~ 309 (435)
+.++..|+++++.+. ++...+++. +.++++|++.++|+++..+.+.. ...+++++|.++
T Consensus 426 ~~~l~~G~~vv~~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~l~~~~----------~~~~~~~lr~i~ 485 (718)
T PRK08043 426 FTPLLTGAEVFLYPSPLHYRIVPEL----------VYDRNCTVLFGTSTFLGNYARFA----------NPYDFARLRYVV 485 (718)
T ss_pred HHHHHcCCEEEEeCCcccHHHHHHH----------HHhcCCeEEEchHHHHHHhhhhc----------CcccccceEEEE
Confidence 999999999998875 455555665 56689999999999998775531 123568999999
Q ss_pred ecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCccceEEEecCC
Q 013869 310 CGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPS 389 (435)
Q Consensus 310 ~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~~Gel~v~~~~ 389 (435)
+||+++++++.+.|++.+++++++.||+||++.+++.........+++|+|+||++++++|+++. +..|||+++|++
T Consensus 486 ~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~~~i~d~~~~---~~~Gel~v~g~~ 562 (718)
T PRK08043 486 AGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGI---EQGGRLQLKGPN 562 (718)
T ss_pred EeCccCCHHHHHHHHHHcCCCeecccCcccccceEEecCCcccCCCCCCCcCCCCeeEEecCCCC---CCceEEEEecCC
Confidence 99999999999999999999999999999998665543333346789999999999999987653 234999999999
Q ss_pred ccccccC--Cchh-------cccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 390 LFKEYWK--LPKV-------TKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 390 ~~~gy~~--~~~~-------~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++.||++ +++. +.+.+..+|||+|||+|++|+||++++.||.||+|
T Consensus 563 v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I 617 (718)
T PRK08043 563 IMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFA 617 (718)
T ss_pred ccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCee
Confidence 9999998 3442 22223357999999999999999999999999986
No 38
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-55 Score=435.64 Aligned_cols=384 Identities=23% Similarity=0.345 Sum_probs=321.6
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
|+|.+.|.++++++|+++|+++.+.++||.||.++++++|.+|.+. + .+|++|+|+++|+++
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------~-~~~~~v~i~~~~~~~ 62 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEK-----------------E-SKNKTIAILLENRIE 62 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHh-----------------C-CCCCEEEEEcCCCHH
Confidence 8899999999999999999999999999999999999999999984 5 479999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchh
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
+++++|||+++|++++|+++.++.+++.++++.++++.++++......+.... ..+..+..... .......
T Consensus 63 ~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~~~ 133 (487)
T PRK07638 63 FLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEE----GRVIEIDEWKR-----MIEKYLP 133 (487)
T ss_pred HHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhcc----ceEEEehhhhh-----hhhhccc
Confidence 99999999999999999999999999999999999999999986554332210 11111110000 0000001
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEE
Q 013869 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (435)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~ 240 (435)
.........+++++++|||||||.||+|.++|+++..++......+++.++|+++...|++|..++. .++.++..|+++
T Consensus 134 ~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~-~~~~~l~~g~~~ 212 (487)
T PRK07638 134 TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLY-GAISTLYVGQTV 212 (487)
T ss_pred cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHH-HHHHHHccCcEE
Confidence 1111123356789999999999999999999999999988888888899999999999999988765 688999999999
Q ss_pred EEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHH
Q 013869 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (435)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~ 320 (435)
++.+.+++..++.. ++++++|++.++|+++..+.+... ..++.+.++++|+.++.++.
T Consensus 213 ~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~------------~~~~~~~~~~~G~~l~~~~~ 270 (487)
T PRK07638 213 HLMRKFIPNQVLDK----------LETENISVMYTVPTMLESLYKENR------------VIENKMKIISSGAKWEAEAK 270 (487)
T ss_pred EEcCCCCHHHHHHH----------HHHcCCeEEEeCcHHHHHHHhCcC------------cCCceeEEEEcCCCCCHHHH
Confidence 99999999998888 666999999999999999987411 12445667889999999999
Q ss_pred HHHHHHh-CCcccccccCccccchhccC-CCCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccccCC
Q 013869 321 QQWETIT-GHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKL 397 (435)
Q Consensus 321 ~~~~~~~-~~~l~~~YG~tE~~~~~~~~-~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~ 397 (435)
+++.+.+ +.++++.||+||++.++... ........++|+|+++++++|+|+++..++.+ .|||+++|+.++.||+++
T Consensus 271 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~~~~gy~~~ 350 (487)
T PRK07638 271 EKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVGRPFHNVQVRICNEAGEEVQKGEIGTVYVKSPQFFMGYIIG 350 (487)
T ss_pred HHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCCcccCCcEEEEECCCCCCCCCCCCeEEEEecccceeeecCC
Confidence 9999998 68899999999998765533 22345677999999999999999999887776 799999999999999999
Q ss_pred chhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 398 PKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 398 ~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++.+.+.+ .+|||+|||+|++|+||++++.||++|+|
T Consensus 351 ~~~~~~~~-~~g~~~TGDl~~~d~~g~l~i~GR~~d~i 387 (487)
T PRK07638 351 GVLARELN-ADGWMTVRDVGYEDEEGFIYIVGREKNMI 387 (487)
T ss_pred HHHHhhhc-cCCcEecCccEeEcCCCeEEEEecCCCeE
Confidence 88776654 58999999999999999999999999986
No 39
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-55 Score=443.16 Aligned_cols=396 Identities=23% Similarity=0.339 Sum_probs=324.1
Q ss_pred HHHHHHhcc-cCCCeeEEEeC----CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC
Q 013869 4 FKAAYKKGS-MARDSVAIRAD----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (435)
Q Consensus 4 ~~~~~~~~~-~~p~~~al~~~----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~ 78 (435)
++.+.+++. .+|+++|++.. .+++||+||.++++++|.+|.+ .|+++||+|+++++|+
T Consensus 46 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-----------------~gv~~gd~V~i~~~n~ 108 (570)
T PRK04319 46 YEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKE-----------------LGVEKGDRVFIFMPRI 108 (570)
T ss_pred HHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCC
Confidence 467788876 57999999874 3689999999999999999998 4999999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC--ccccCCCCCCC-CCcccc
Q 013869 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPNV-SSETTV 155 (435)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~ 155 (435)
+++++++|||+++|++++|+++.++.+++.++++.++++++++++......... ..+. .+..+...... ......
T Consensus 109 ~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 186 (570)
T PRK04319 109 PELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPAD--DLPSLKHVLLVGEDVEEGPGTLDF 186 (570)
T ss_pred HHHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchh--cCCCceEEEEECCCcCCCcCccCH
Confidence 999999999999999999999999999999999999999999998765443211 1111 11111111000 000000
Q ss_pred c----cchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHH
Q 013869 156 F----DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALL 231 (435)
Q Consensus 156 ~----~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~ 231 (435)
. ............++++++++|||||||.||+|.++|+++..++......+++.+++++++..|++|..+....++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~ 266 (570)
T PRK04319 187 NALMEQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIF 266 (570)
T ss_pred HHHHhhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHH
Confidence 0 000111122346789999999999999999999999999988888888888999999999999999998877899
Q ss_pred HHHHcCCEEEEcC-CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEe
Q 013869 232 APLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMC 310 (435)
Q Consensus 232 ~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~ 310 (435)
.++..|+++++.+ .+++..+++. ++++++|++.++|++++.+++..... ....+++++|.+++
T Consensus 267 ~~l~~G~~~v~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~~~~ 330 (570)
T PRK04319 267 APWLNGATNVIDGGRFSPERWYRI----------LEDYKVTVWYTAPTAIRMLMGAGDDL------VKKYDLSSLRHILS 330 (570)
T ss_pred HHHhcCceEEEECCCCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhcCCcc------cccCCcccceEEEE
Confidence 9999999999875 5788888888 66699999999999999998643211 12235789999999
Q ss_pred cCCCCCHHHHHHHHHHhCCcccccccCccccchhc-cCCCCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEec-
Q 013869 311 GSSALPLPVMQQWETITGHRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS- 387 (435)
Q Consensus 311 ~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~-~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~- 387 (435)
||+++++++.+.+.+.++.++++.||+||++.+++ ........++++|+|+|+++++|+|+++...+.+ .|||+++|
T Consensus 331 gG~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~~Gel~i~~~ 410 (570)
T PRK04319 331 VGEPLNPEVVRWGMKVFGLPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVDDQGNELPPNRMGNLAIKKG 410 (570)
T ss_pred cccCCCHHHHHHHHHHhCCCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEECCCCCCCCCCCceEEEEcCC
Confidence 99999999999999999999999999999986544 2222234567899999999999999988877666 79999997
Q ss_pred -CCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 388 -PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 388 -~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+.++.||+++++.+.+.|. +|||+|||+|++++||++++.||.+|+|
T Consensus 411 ~~~~~~GY~~~~~~~~~~~~-~gw~~TGDl~~~~~~g~l~~~GR~~d~i 458 (570)
T PRK04319 411 WPSMMRGIWNNPEKYESYFA-GDWYVSGDSAYMDEDGYFWFQGRVDDVI 458 (570)
T ss_pred CChHHhHhcCCHHHhhhhhc-CCceEeCcEEEECCCeeEEEEecCCCEE
Confidence 8999999999999998886 7999999999999999999999999986
No 40
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=2.3e-55 Score=441.58 Aligned_cols=392 Identities=23% Similarity=0.330 Sum_probs=308.2
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCc----------ccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCe
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQK----------SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGAR 70 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~----------~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~ 70 (435)
+|+.+.|.+.++++|+++|++..+. ++||+||.++++++|++|.+ .|+++||+
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~-----------------~g~~~gd~ 68 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA-----------------AGIGRGMR 68 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCE
Confidence 4788999999999999999998554 89999999999999999999 49999999
Q ss_pred EEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech--hhHHHHHHHHhccCCccccCCCC--
Q 013869 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE--DYREVLQNVASKSGAKFSLIPPV-- 146 (435)
Q Consensus 71 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 146 (435)
|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++++++ .....+.............+...
T Consensus 69 V~~~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 148 (552)
T PRK09274 69 AVLMVTPSLEFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLL 148 (552)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccc
Confidence 99999999999999999999999999999999999999999999999999975 22222211110000001111000
Q ss_pred CCCCCccccc-c-chhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhh
Q 013869 147 PNVSSETTVF-D-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVH 224 (435)
Q Consensus 147 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 224 (435)
.......... . ...........++++++++|||||||.||+|.++|+++...+......+++.++++.+...|++|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 228 (552)
T PRK09274 149 WGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALF 228 (552)
T ss_pred cCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhh
Confidence 0000000000 0 0001112344678999999999999999999999999999988888888999999999999987754
Q ss_pred HHHHHHHHHHHcCCEEEEcC-------CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHH
Q 013869 225 GLFNALLAPLYAGATVEFMP-------KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (435)
Q Consensus 225 g~~~~~~~~l~~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~ 297 (435)
+ +..|.++++.+ .+++..+++. ++++++|++.++|+++..|++... .
T Consensus 229 ~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~--------~ 282 (552)
T PRK09274 229 G--------PALGMTSVIPDMDPTRPATVDPAKLFAA----------IERYGVTNLFGSPALLERLGRYGE--------A 282 (552)
T ss_pred h--------hhhCCeEEecCcccccccccCHHHHHHH----------HHHcCCeEEeccHHHHHHHHHHhh--------h
Confidence 3 34578887764 3567777777 667999999999999999987532 2
Q ss_pred hhhhccccEEEEecCCCCCHHHHHHHHHHh--CCcccccccCccccchhccCCC----------CCCCCCccceecCCCe
Q 013869 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEFVMAISNPLR----------GARKAGTVGNPLPGVQ 365 (435)
Q Consensus 298 ~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~--~~~l~~~YG~tE~~~~~~~~~~----------~~~~~~~~G~p~~~~~ 365 (435)
...+++++|.+++||+++++++.+.|.+.| ++++++.||+||++.+++.... ......++|+|+++++
T Consensus 283 ~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~ 362 (552)
T PRK09274 283 NGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVE 362 (552)
T ss_pred cCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCce
Confidence 234678999999999999999999999999 4699999999999865442211 1122347899999999
Q ss_pred EEEecC---------CCCCCCCc-cceEEEecCCccccccCCchhccccc--ccCC--ccccCceEEEcCCccEEEeccc
Q 013869 366 VKIAED---------ESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSF--TADG--FFKTGDTGKQDEDGYYIILGRK 431 (435)
Q Consensus 366 ~~i~d~---------~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~--~~~g--~~~TGD~g~~~~dG~l~~~gR~ 431 (435)
++|+|+ +++.++.+ .|||+++|+.++.||+++++.+...| +.+| ||+|||+|++|+||+++++||.
T Consensus 363 ~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~ 442 (552)
T PRK09274 363 VRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRK 442 (552)
T ss_pred EEEEeccccccccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEecc
Confidence 999984 33445555 79999999999999999999988776 3456 9999999999999999999999
Q ss_pred ccCC
Q 013869 432 GIYF 435 (435)
Q Consensus 432 ~d~i 435 (435)
+|+|
T Consensus 443 ~d~i 446 (552)
T PRK09274 443 AHRV 446 (552)
T ss_pred CCeE
Confidence 9986
No 41
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-54 Score=433.62 Aligned_cols=399 Identities=24% Similarity=0.306 Sum_probs=319.7
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC--cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQ--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~--~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~ 79 (435)
++.+.|.++++++|+++|+++.+ +++||+||.++++++|++|.+ .|+++||+|+|+++|++
T Consensus 17 ~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gv~~gd~V~i~~~n~~ 79 (534)
T PRK05852 17 RIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTR-----------------SGLLPGDRVALRMGSNA 79 (534)
T ss_pred cHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCCcH
Confidence 57889999999999999998743 579999999999999999999 49999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHh-ccCCccccCCCCCCC--CCc-ccc
Q 013869 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS-KSGAKFSLIPPVPNV--SSE-TTV 155 (435)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~-~~~ 155 (435)
+++++++||+++|++++|+++.++.+++.++++.++++++|++.+.......... ..+..+ .+...... ... ...
T Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 158 (534)
T PRK05852 80 EFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTV-NVGGDSGPSGGTLSVHL 158 (534)
T ss_pred HHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceee-eeccccccccccccccc
Confidence 9999999999999999999999999999999999999999998753321111000 000000 00000000 000 000
Q ss_pred ---ccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHH
Q 013869 156 ---FDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLA 232 (435)
Q Consensus 156 ---~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~ 232 (435)
..............++.++++|||||||.||+|.++|+++...+......+++..+|++++..|++|..+++..++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 238 (534)
T PRK05852 159 DAATEPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLA 238 (534)
T ss_pred ccccCCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHH
Confidence 00000001112234688999999999999999999999999999888888899999999999999999999888999
Q ss_pred HHHcCCEEEEcC--CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEe
Q 013869 233 PLYAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMC 310 (435)
Q Consensus 233 ~l~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~ 310 (435)
++..|+++++++ .+++..+++. ++++++|+++++|.++..+.+..... .....++++|.+.+
T Consensus 239 ~l~~g~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~i~~ 302 (534)
T PRK05852 239 TLASGGAVLLPARGRFSAHTFWDD----------IKAVGATWYTAVPTIHQILLERAATE------PSGRKPAALRFIRS 302 (534)
T ss_pred HHhcCCeEEeCCCcCcCHHHHHHH----------HHHcCCcEEEcChHHHHHHHhhcccc------cccccCCCeeEEEE
Confidence 999999999865 4677788887 66699999999999999998754321 11235688999999
Q ss_pred cCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCC-----CCCCCCcccee--cCCCeEEEecCCCCCCCCc-cce
Q 013869 311 GSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-----GARKAGTVGNP--LPGVQVKIAEDESGSDAAG-VGE 382 (435)
Q Consensus 311 ~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-----~~~~~~~~G~p--~~~~~~~i~d~~~~~~~~~-~Ge 382 (435)
+|+++++++++.|.+.++.++++.||+||++..++.... ......+.|.+ .+|++++++|++++.++.+ .||
T Consensus 303 ~G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d~~g~~~~~g~~Ge 382 (534)
T PRK05852 303 CSAPLTAETAQALQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVGSDGLPLPAGAVGE 382 (534)
T ss_pred CCCCCCHHHHHHHHHHhCCChhhccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEEECCCCCCCCCCCceE
Confidence 999999999999999999999999999999876553211 11112234444 6999999999999887766 799
Q ss_pred EEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 383 ICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 383 l~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|+++|+.++.||+++++.+.+.|. +|||+|||+|++|+||++++.||.+|+|
T Consensus 383 l~v~g~~v~~gY~~~~~~t~~~~~-~g~~~TGD~~~~d~dG~l~~~gR~~d~i 434 (534)
T PRK05852 383 VWLRGTTVVRGYLGDPTITAANFT-DGWLRTGDLGSLSAAGDLSIRGRIKELI 434 (534)
T ss_pred EEEecCcccchhcCCcccchhhhc-CCCcccCceEEEeCCCcEEEEecchhhE
Confidence 999999999999999999998884 7899999999999999999999999986
No 42
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-54 Score=433.26 Aligned_cols=398 Identities=26% Similarity=0.351 Sum_probs=334.9
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.++|.++++.+|+++|+++.++.+||+||.+++.++|..|.+. |+++|++|+++++|++++
T Consensus 12 ~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------gi~~~~~V~l~~~~~~~~ 74 (523)
T PRK08316 12 TIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDL-----------------GLKKGDRVAALGHNSDAY 74 (523)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHHH
Confidence 578899999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCC----Ccccc--
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVS----SETTV-- 155 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-- 155 (435)
+++++||+++|++++|+++..+.+++..+++.+++++++++.+....+....+........+....... .....
T Consensus 75 ~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (523)
T PRK08316 75 ALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFAD 154 (523)
T ss_pred HHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHH
Confidence 999999999999999999999999999999999999999999887776654433221111111100000 00000
Q ss_pred -ccc-hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHH
Q 013869 156 -FDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (435)
Q Consensus 156 -~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~ 233 (435)
... ...........+++++++|||||||.||+|.++|+++..+.......+++.++++++..+|++|..++...+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~ 234 (523)
T PRK08316 155 WAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPY 234 (523)
T ss_pred HHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHH
Confidence 000 011123355678999999999999999999999999999888888888999999999999999999987667778
Q ss_pred HHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCC
Q 013869 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (435)
Q Consensus 234 l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~ 313 (435)
+..|+++++.+..++..++.. ++++++|++.++|.++..+++... ....+++++|.+++||+
T Consensus 235 ~~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~l~~~~~gg~ 296 (523)
T PRK08316 235 LYVGATNVILDAPDPELILRT----------IEAERITSFFAPPTVWISLLRHPD--------FDTRDLSSLRKGYYGAS 296 (523)
T ss_pred HhcCceEEEecCCCHHHHHHH----------HHHhCCeEEEeCHHHHHHHHcCcc--------cccCCcccceEEEEcCC
Confidence 999999999988888888888 566999999999999999987532 12346789999999999
Q ss_pred CCCHHHHHHHHHHh-CCcccccccCccccchhccCC--CCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCC
Q 013869 314 ALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL--RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPS 389 (435)
Q Consensus 314 ~l~~~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~--~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~ 389 (435)
.++.++.+.|++.+ +.++++.||+||++.++.... ......+++|+|+++++++|.|++++.++.+ .|||+++|+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gei~v~~~~ 376 (523)
T PRK08316 297 IMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGEVGEIVHRSPQ 376 (523)
T ss_pred cCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCCCCCcceEEEECCc
Confidence 99999999999988 789999999999987655322 2234567899999999999999888887766 7999999999
Q ss_pred ccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 390 LFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 390 ~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++.||+++++.++..| .+|||+|||+|++++||.++++||.+|+|
T Consensus 377 ~~~~y~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~i~gR~~~~i 421 (523)
T PRK08316 377 LMLGYWDDPEKTAEAF-RGGWFHSGDLGVMDEEGYITVVDRKKDMI 421 (523)
T ss_pred hhhhhcCCHHHHHHHh-hCCCeeccceEEEcCCceEEEecccccEE
Confidence 9999999999998888 48999999999999999999999999975
No 43
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.1e-56 Score=392.09 Aligned_cols=399 Identities=22% Similarity=0.318 Sum_probs=338.5
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.+.|.++|.++||++|+++.++.+||+||.+++.++|..|++ +|+++||+|.+-+||..+|
T Consensus 29 ~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~-----------------lGi~~Gd~vlvQLpN~~ef 91 (542)
T COG1021 29 TLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRR-----------------LGIKPGDTVLVQLPNVAEF 91 (542)
T ss_pred cHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCchHHH
Confidence 57889999999999999999999999999999999999999999 5999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech-----hhHHHHHHHHhccCC-ccccCCCCCCCC--Ccc
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE-----DYREVLQNVASKSGA-KFSLIPPVPNVS--SET 153 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~ 153 (435)
++++||++++|+.+|.--|.....++.++.+.+.++.+|.+. ++.+...+.....+. +...+....+.. ...
T Consensus 92 ~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~ 171 (542)
T COG1021 92 YITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEA 171 (542)
T ss_pred HHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhh
Confidence 999999999999999888888999999999999999999986 444555544444433 222222111111 111
Q ss_pred ccccchh-hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHH-HHH
Q 013869 154 TVFDQSQ-AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN-ALL 231 (435)
Q Consensus 154 ~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~-~~~ 231 (435)
....... ..+..+.+.++++++..+.||||.||.|..||..+..+++...+..++++.++.++.+|..|-+.+.. +++
T Consensus 172 ~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~L 251 (542)
T COG1021 172 ALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGAL 251 (542)
T ss_pred hhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchh
Confidence 1111111 12234667889999999999999999999999999999999999999999999999999988775433 688
Q ss_pred HHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEec
Q 013869 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (435)
Q Consensus 232 ~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~ 311 (435)
+.+.+|+++|+.+..++...+.+ |+++++|+...+|.+...+++..+. ...+++|||.+-.|
T Consensus 252 Gv~~agG~VVla~~psp~~~F~l----------Ierh~Vt~tALVPpla~LWlqa~e~--------~~~~LsSLrllQVG 313 (542)
T COG1021 252 GVFLAGGTVVLAPDPSPELCFPL----------IERHGVTVTALVPPLASLWLQAAEW--------ERADLSSLRLLQVG 313 (542)
T ss_pred heeeeccEEEECCCCCHHHHHHH----------HHHhccceEEeccHHHHHHHHhhhc--------ccCCchheeEEeec
Confidence 99999999999999999999999 7889999999999999999997543 45589999999999
Q ss_pred CCCCCHHHHHHHHHHhCCcccccccCccccchhccCCC-CCCCCCccceec-CCCeEEEecCCCCCCCCc-cceEEEecC
Q 013869 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPL-PGVQVKIAEDESGSDAAG-VGEICVKSP 388 (435)
Q Consensus 312 G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~~~G~p~-~~~~~~i~d~~~~~~~~~-~Gel~v~~~ 388 (435)
|+.+++.+.+++...+++.+-+.+|+.|.-.-.+.-.+ ...-..+-|+|+ |.-+++|+|.+|+++.+| +|+|.++||
T Consensus 314 Garl~~~~Arrv~~~lgC~LQQVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE~G~LltRGP 393 (542)
T COG1021 314 GARLSATLARRVPAVLGCQLQQVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGEVGELLTRGP 393 (542)
T ss_pred CcccCHHHHhhchhhhCchHHHHhhhhhhhhcccccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCCcceeeecCC
Confidence 99999999999999999999999999997554442211 122234568887 788999999999997665 899999999
Q ss_pred CccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 389 SLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 389 ~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
.-++||++.|+.+.++|+.+|||+|||++++|+||+|.+.||.||+|
T Consensus 394 YTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQI 440 (542)
T COG1021 394 YTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQI 440 (542)
T ss_pred eeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhh
Confidence 99999999999999999999999999999999999999999999987
No 44
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-54 Score=429.51 Aligned_cols=382 Identities=27% Similarity=0.403 Sum_probs=324.3
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
|++.+.|.+++..+||++|+++.++.+||+||+++++++|++|.+. |+++||+|+++++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~-----------------g~~~~~~v~i~~~~~~~ 64 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAAL-----------------GVKKGDRVALLMKNGME 64 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 7899999999999999999999999999999999999999999994 89999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchh
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
++++++||+++|++++|+++..+.+++..++++++++.++++.+........... . + ...... ....
T Consensus 65 ~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~---~---~---~~~~~~----~~~~ 131 (483)
T PRK03640 65 MILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGISV---K---F---AELMNG----PKEE 131 (483)
T ss_pred HHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhccc---c---H---HHHhhc----cccc
Confidence 9999999999999999999999999999999999999999998766544332110 0 0 000000 0000
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEE
Q 013869 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (435)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~ 240 (435)
.........+++++++|||||||.||+|.++|.++..++......+++.++++++..+|++|..++. .++.++..|+++
T Consensus 132 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~-~~~~~l~~G~~~ 210 (483)
T PRK03640 132 AEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLS-ILMRSVIYGMRV 210 (483)
T ss_pred CCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHH-HHHHHHhcCCEE
Confidence 1112234678999999999999999999999999988887777778899999999999999999986 488999999999
Q ss_pred EEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHH
Q 013869 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (435)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~ 320 (435)
++.+.+++..+++. +.++++|++.++|+++..+++..... ...+++|.++.||++++..+.
T Consensus 211 ~~~~~~~~~~~~~~----------i~~~~~t~l~~~P~~~~~l~~~~~~~---------~~~~~lr~~~~~g~~~~~~~~ 271 (483)
T PRK03640 211 VLVEKFDAEKINKL----------LQTGGVTIISVVSTMLQRLLERLGEG---------TYPSSFRCMLLGGGPAPKPLL 271 (483)
T ss_pred EecCCCCHHHHHHH----------HHHhCCcEEEeHHHHHHHHHhCcCcc---------ccCCcceEEEEcCCCCCHHHH
Confidence 99999999888888 56699999999999999998653321 234689999999999999999
Q ss_pred HHHHHHhCCcccccccCccccchhc--cCCCCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccccCC
Q 013869 321 QQWETITGHRLLERYGMTEFVMAIS--NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKL 397 (435)
Q Consensus 321 ~~~~~~~~~~l~~~YG~tE~~~~~~--~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~ 397 (435)
+.+++. ++++++.||+||++..++ .........+++|+|++++++++.+++ ..++.+ .|||+++|+.++.||+++
T Consensus 272 ~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~~-~~~~~g~~Gel~v~g~~~~~gy~~~ 349 (483)
T PRK03640 272 EQCKEK-GIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKDG-VVVPPFEEGEIVVKGPNVTKGYLNR 349 (483)
T ss_pred HHHHHh-CCCeeeeeccCcccccccccCcccccccCCCcccccCCcEEEEecCC-CcCCCCCceEEEEECcchhhhhcCC
Confidence 988875 999999999999875433 222234567899999999999999865 555555 799999999999999999
Q ss_pred chhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 398 PKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 398 ~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++.+...| .+|||+|||+|++++||++++.||++|+|
T Consensus 350 ~~~~~~~~-~~~~~~tGDl~~~~~~g~l~~~GR~~~~i 386 (483)
T PRK03640 350 EDATRETF-QDGWFKTGDIGYLDEEGFLYVLDRRSDLI 386 (483)
T ss_pred HHHHHHHH-hcCCeeccceEEEcCCCCEEEeecccCeE
Confidence 99998888 47999999999999999999999999875
No 45
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2e-54 Score=434.23 Aligned_cols=398 Identities=24% Similarity=0.385 Sum_probs=327.7
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC-cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQ-KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~-~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
++.+.|.++++.+||++|++++. +.+||+||+++++++|++|++. |+++||+|+++++|+++
T Consensus 24 ~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~-----------------G~~~gd~V~i~~~n~~~ 86 (547)
T PRK06087 24 SLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAK-----------------GIEPGDRVAFQLPGWCE 86 (547)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 57889999999999999999865 7999999999999999999994 99999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhh-----HHHHHHHHhccCC--ccccCCCCCCCCCcc
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKSGA--KFSLIPPVPNVSSET 153 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 153 (435)
++++++||+++|++++|+++..+.+++.++++.+++++++++... .+.+......... .+..+..........
T Consensus 87 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (547)
T PRK06087 87 FTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSL 166 (547)
T ss_pred HHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCcc
Confidence 999999999999999999999999999999999999999997632 2333333222211 111111100000000
Q ss_pred c---c-ccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHH
Q 013869 154 T---V-FDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNA 229 (435)
Q Consensus 154 ~---~-~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~ 229 (435)
. . ..............+++++++|||||||.||+|.++|.++..+........++.+.+++++..|++|.++++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 246 (547)
T PRK06087 167 SLSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHG 246 (547)
T ss_pred CHHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHH
Confidence 0 0 00000011223567899999999999999999999999999888888888889999999999999999998888
Q ss_pred HHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEE
Q 013869 230 LLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (435)
Q Consensus 230 ~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~ 309 (435)
++.++..|+++++.+.+++..+++. +.++++|++.++|..+..+++... .....++++|.++
T Consensus 247 ~~~~l~~g~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~~~l~~~~--------~~~~~~~~lr~i~ 308 (547)
T PRK06087 247 VTAPFLIGARSVLLDIFTPDACLAL----------LEQQRCTCMLGATPFIYDLLNLLE--------KQPADLSALRFFL 308 (547)
T ss_pred HHHHHhcCCEEEecCCCCHHHHHHH----------HHHcCCCEEeccHHHHHHHHhccc--------cCCCCCCCeEEEE
Confidence 9999999999999999999988888 566899999998888877776532 1233578999999
Q ss_pred ecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCC--CCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEe
Q 013869 310 CGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVK 386 (435)
Q Consensus 310 ~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~--~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~ 386 (435)
+||+++++++.+.+.+. ++++++.||+||++.+....... .....++|.|+++++++++|+++..++.+ .|||+++
T Consensus 309 ~gG~~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~ 387 (547)
T PRK06087 309 CGGTTIPKKVARECQQR-GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGCEGEEASR 387 (547)
T ss_pred EcCCCCCHHHHHHHHHc-CCcEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCCCcceEEEe
Confidence 99999999999988875 99999999999998765533322 12345789999999999999988887766 7999999
Q ss_pred cCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 387 SPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 387 ~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|+.++.||+++++.+...++.+|||+|||+|+++++|+++++||.+|+|
T Consensus 388 g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i 436 (547)
T PRK06087 388 GPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDII 436 (547)
T ss_pred cccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhh
Confidence 9999999999999999888888999999999999999999999999976
No 46
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-54 Score=430.73 Aligned_cols=393 Identities=21% Similarity=0.342 Sum_probs=328.3
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
|++.++|.++++++|+++|++..++++||.||.++++++|.+|.+. |+++|++|+++++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~-----------------g~~~~~~v~i~~~~~~~ 64 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHAR-----------------GIGQGDVVALLMKNSAA 64 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 6899999999999999999999999999999999999999999994 89999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccc-cch
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVF-DQS 159 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 159 (435)
++++++||+++|++++|+++..+.+++.++++.++++.++++.+........ .....+.... ........ ...
T Consensus 65 ~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~ 138 (497)
T PRK06145 65 FLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVALE-----TPKIVIDAAA-QADSRRLAQGGL 138 (497)
T ss_pred HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhcc-----cceEEecCcc-cchhHHHhccCC
Confidence 9999999999999999999999999999999999999999998765432210 0111111000 00000000 000
Q ss_pred hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCE
Q 013869 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (435)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (435)
.........++++++++|||||||.||+|.++|+++..........+++..+++++...|++|..++....+.++..|++
T Consensus 139 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~ 218 (497)
T PRK06145 139 EIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGT 218 (497)
T ss_pred CCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCE
Confidence 11112245678999999999999999999999999987776666777889999999999999999887667888999999
Q ss_pred EEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHH
Q 013869 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (435)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l 319 (435)
+++.+.+++..+++. ++++++|.+.++|+++..+++.... ....++++|.+++||++++.++
T Consensus 219 ~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~ll~~~~~--------~~~~~~~l~~~~~gG~~~~~~~ 280 (497)
T PRK06145 219 LRIHREFDPEAVLAA----------IERHRLTCAWMAPVMLSRVLTVPDR--------DRFDLDSLAWCIGGGEKTPESR 280 (497)
T ss_pred EEECCcCCHHHHHHH----------HHHhCCeEEEehHHHHHHHHcCCCc--------cccccccceEEEecCCCCCHHH
Confidence 999999999998888 5668999999999999999875321 2235678999999999999999
Q ss_pred HHHHHHHh-CCcccccccCccccchhccCCC--CCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCcccccc
Q 013869 320 MQQWETIT-GHRLLERYGMTEFVMAISNPLR--GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYW 395 (435)
Q Consensus 320 ~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~--~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~ 395 (435)
++.|.+.| +.++++.||+||++..++.... .....+++|+|++++++++.|+++...+.+ .|||+++|+.++.||+
T Consensus 281 ~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g~~~~~Gy~ 360 (497)
T PRK06145 281 IRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLPPNMKGEICMRGPKVTKGYW 360 (497)
T ss_pred HHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCCCCCceEEEEECcchhhhhc
Confidence 99999998 6789999999999865442211 223567899999999999999988887666 7999999999999999
Q ss_pred CCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 396 KLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 396 ~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++++.+...|. ++||+|||+|++++||+++++||.+|+|
T Consensus 361 ~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~~~GR~~~~i 399 (497)
T PRK06145 361 KDPEKTAEAFY-GDWFRSGDVGYLDEEGFLYLTDRKKDMI 399 (497)
T ss_pred CChHHHHHHHh-CCCeeccceEEEcCCCcEEEeccccceE
Confidence 99999998884 7999999999999999999999999986
No 47
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=3.3e-54 Score=431.74 Aligned_cols=396 Identities=25% Similarity=0.351 Sum_probs=324.8
Q ss_pred hHHHHHHHhcccCCCeeEEEe------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEe
Q 013869 2 EVFKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~ 75 (435)
++.+.|.++++.+|+++|++. .++.+||+||+++++++|.+|.+ .|+++|++|++++
T Consensus 23 ~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-----------------~g~~~g~~V~i~~ 85 (538)
T TIGR03208 23 TINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLAR-----------------LGVGRGDVVSFQL 85 (538)
T ss_pred cHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEC
Confidence 678899999999999999986 24689999999999999999999 4999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhH-----HHHHHHHhccCC--ccccCCCCCC
Q 013869 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSGA--KFSLIPPVPN 148 (435)
Q Consensus 76 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~ 148 (435)
+|+++++++++||+++|++++|+++..+.+++.++++.++++++++++.+. ..........+. .+..... ..
T Consensus 86 ~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 164 (538)
T TIGR03208 86 PNRWEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDG-DG 164 (538)
T ss_pred CCCHHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecC-CC
Confidence 999999999999999999999999999999999999999999999987642 112222111111 1111110 00
Q ss_pred CCCcccc---c--cchhh----hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeec
Q 013869 149 VSSETTV---F--DQSQA----EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLP 219 (435)
Q Consensus 149 ~~~~~~~---~--~~~~~----~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~p 219 (435)
....... . ..... .......++++++++|||||||.||+|.++|+++...+......+++..++++++.+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p 244 (538)
T TIGR03208 165 DDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASP 244 (538)
T ss_pred CcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCC
Confidence 0000000 0 00000 0112356799999999999999999999999999999888888888999999999999
Q ss_pred chhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhh
Q 013869 220 LHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299 (435)
Q Consensus 220 l~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 299 (435)
++|..++...++.++..|+++++.+.+++..+++. ++++++|++.++|.++..+.+..+. ..
T Consensus 245 l~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~----------l~~~~vt~~~~~p~~~~~l~~~~~~--------~~ 306 (538)
T TIGR03208 245 MAHQTGFMYGLMMPLILNATAVLQDIWNPARAAEL----------IRETGVTFTMASTPFLTDLCRAVKE--------SG 306 (538)
T ss_pred chhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHH----------HHHhCCeEEecCHHHHHHHHhchhc--------cC
Confidence 99999887789999999999999998999998888 5668999999999999998765321 22
Q ss_pred hhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCC--CCCCCccceecCCCeEEEecCCCCCCC
Q 013869 300 SAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDA 377 (435)
Q Consensus 300 ~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~--~~~~~~~G~p~~~~~~~i~d~~~~~~~ 377 (435)
..++++|.+++||+++++++.++|.+.+++++++.||+||++.+.+..... .....++|+|+++++++|+|+++...+
T Consensus 307 ~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~ 386 (538)
T TIGR03208 307 APVPSLFTFLCAGAPIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLS 386 (538)
T ss_pred CCCCcceEEEEcCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCc
Confidence 357889999999999999999999998999999999999998765533221 122457899999999999999888776
Q ss_pred Cc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 378 AG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 378 ~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
.+ .|||+++|+.++.||+++++.+. .+.+|||+|||+|++|+||+++++||.+|+|
T Consensus 387 ~g~~Gel~v~g~~~~~gy~~~~~~~~--~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i 443 (538)
T TIGR03208 387 QGETGRLLVRGCSNFGGYLKRPHLNS--TDAEGWFDTGDLAFQDAEGYIRINGRSKDVI 443 (538)
T ss_pred CCCCcEEEEecCcccccccCCccccc--ccCCCceeccceEEECCCCcEEEEeccCceE
Confidence 66 79999999999999999998765 3468999999999999999999999999975
No 48
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=3.2e-54 Score=431.38 Aligned_cols=395 Identities=22% Similarity=0.349 Sum_probs=327.9
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+++.+.|.++++.+|+++|++..++.+||+||++++.++|..|.+ .|+++|++|+++++|+++
T Consensus 21 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~-----------------~gi~~g~~V~v~~~n~~~ 83 (542)
T PRK06155 21 RTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAA-----------------AGVKRGDRVALMCGNRIE 83 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCChH
Confidence 367899999999999999999999999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccC--CccccCCCCCCC--C-Cc--c
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AKFSLIPPVPNV--S-SE--T 153 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~-~~--~ 153 (435)
++++++||+++|++++|+++.++.+++..+++++++++++++.+....+........ ..+..+...... . .. .
T Consensus 84 ~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (542)
T PRK06155 84 FLDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTA 163 (542)
T ss_pred HHHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchh
Confidence 999999999999999999999999999999999999999999988776655433221 111111111000 0 00 0
Q ss_pred ccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHH
Q 013869 154 TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (435)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~ 233 (435)
...............++++++++|||||||.||+|.++|+++..........+++.+.+++++..|++|..++. .++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~-~~~~~ 242 (542)
T PRK06155 164 PLPPLDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALN-AFFQA 242 (542)
T ss_pred hhcccCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHH-HHHHH
Confidence 00000000112234678999999999999999999999999988887778888999999999999999999986 58999
Q ss_pred HHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCC
Q 013869 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (435)
Q Consensus 234 l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~ 313 (435)
+..|+++++.+.+++..++.. ++++++|++.++|+++..+++..... ....+++|.++.+|
T Consensus 243 l~~G~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~~~~l~~~~~~~--------~~~~~~l~~~~~g~- 303 (542)
T PRK06155 243 LLAGATYVLEPRFSASGFWPA----------VRRHGATVTYLLGAMVSILLSQPARE--------SDRAHRVRVALGPG- 303 (542)
T ss_pred HHcCceEEeeCCCCHHHHHHH----------HHHhCCcEEEchHHHHHHHHcCcCcc--------ccccCceEEEEEcC-
Confidence 999999999999999999888 55689999999999999988754321 22456788777555
Q ss_pred CCCHHHHHHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecC---C
Q 013869 314 ALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSP---S 389 (435)
Q Consensus 314 ~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~---~ 389 (435)
+++.+.+.|++.+++++++.||+||++.++.... .....+++|.|.++++++|+|++++.++.+ .|||+++|+ .
T Consensus 304 -~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~-~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gei~v~~~~~~~ 381 (542)
T PRK06155 304 -VPAALHAAFRERFGVDLLDGYGSTETNFVIAVTH-GSQRPGSMGRLAPGFEARVVDEHDQELPDGEPGELLLRADEPFA 381 (542)
T ss_pred -CCHHHHHHHHHHcCCCEEeeecccccCccccCCC-CCCCCCCcCccCCCceEEEECCCCCCCCCCCceEEEEecCCccc
Confidence 5789999999999999999999999987665432 234667899999999999999988887776 799999998 6
Q ss_pred ccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 390 LFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 390 ~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++.||+++++.+.+.| .++||+|||+|++++||++++.||.+|+|
T Consensus 382 ~~~GY~~~~~~~~~~~-~~~~~~TGD~~~~~~dG~l~i~GR~~d~i 426 (542)
T PRK06155 382 FATGYFGMPEKTVEAW-RNLWFHTGDRVVRDADGWFRFVDRIKDAI 426 (542)
T ss_pred cchhhcCCHHHHHHhh-cCCcEeccceEEEcCCceEEEEecCCCEE
Confidence 9999999999988887 48999999999999999999999999985
No 49
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.7e-54 Score=434.54 Aligned_cols=399 Identities=25% Similarity=0.388 Sum_probs=325.8
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+++.+.|.++++++|+++|++..++.+||.||+++++++|+.|.+ .|+++||+|+++++|+++
T Consensus 32 ~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~-----------------~gi~~gd~V~l~~~n~~~ 94 (573)
T PRK05605 32 TTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRA-----------------LGVRPGDRVAIVLPNCPQ 94 (573)
T ss_pred CCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCCHH
Confidence 468899999999999999999999999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCc-cccCCCCC------------
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVP------------ 147 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------ 147 (435)
++++++||+++|++++|+++.++.+++.+++++++++++|+++.....+.......... +..+....
T Consensus 95 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 174 (573)
T PRK05605 95 HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRL 174 (573)
T ss_pred HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccc
Confidence 99999999999999999999999999999999999999999887766555443221111 10000000
Q ss_pred ---CCC-----------Ccccccc---c-hh----hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh
Q 013869 148 ---NVS-----------SETTVFD---Q-SQ----AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA 205 (435)
Q Consensus 148 ---~~~-----------~~~~~~~---~-~~----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~ 205 (435)
... ....... . .. .........+++++++|||||||.||+|.++|+++..++......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~ 254 (573)
T PRK05605 175 PIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAW 254 (573)
T ss_pred ccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhh
Confidence 000 0000000 0 00 011223457899999999999999999999999998877654443
Q ss_pred cc-C-CCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHH
Q 013869 206 WE-Y-TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (435)
Q Consensus 206 ~~-~-~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 283 (435)
.. + ...+++++.+|++|..|+...+..++..|+++++.+.+++..+++. ++++++|.+.++|.+++.+
T Consensus 255 ~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l 324 (573)
T PRK05605 255 VPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDA----------MKKHPPTWLPGVPPLYEKI 324 (573)
T ss_pred ccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHH----------HHHhCCEEEEchHHHHHHH
Confidence 32 2 3468999999999999987778888999999999999899888888 5668999999999999999
Q ss_pred HhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccC-CCCCCCCCccceecC
Q 013869 284 IQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPLP 362 (435)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~-~~~~~~~~~~G~p~~ 362 (435)
++..+. ....++++|.+++||+++++++.+.|.+.++.++++.||+||++++++.. .......+++|+|++
T Consensus 325 ~~~~~~--------~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~ 396 (573)
T PRK05605 325 AEAAEE--------RGVDLSGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFP 396 (573)
T ss_pred HhCccc--------cCCCchhccEEEECCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCcccCCcCCccccCCC
Confidence 876432 22356789999999999999999999998899999999999998765533 222345678999999
Q ss_pred CCeEEEecCCC--CCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 363 GVQVKIAEDES--GSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 363 ~~~~~i~d~~~--~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+++++|+|+++ ..++.+ .|||+++|+.++.||+++++.+...|. +|||+|||+|+++++|++++.||.+|+|
T Consensus 397 ~~~~~i~d~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~i~gR~dd~i 471 (573)
T PRK05605 397 DTEVRIVDPEDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFL-DGWFRTGDVVVMEEDGFIRIVDRIKELI 471 (573)
T ss_pred CCEEEEEcCCCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhccc-CCCcccCCEEEEcCCCcEEEEeccccce
Confidence 99999999764 555555 799999999999999999999998885 5799999999999999999999999985
No 50
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.5e-54 Score=430.54 Aligned_cols=398 Identities=26% Similarity=0.410 Sum_probs=337.0
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+++.++|.++++.+|+++|+.+.++.+||+||+++++++|+.|.+. |+++|++|+++++|+++
T Consensus 6 ~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------g~~~~~~V~l~~~~~~~ 68 (521)
T PRK06187 6 LTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRAL-----------------GVKKGDRVAVFDWNSHE 68 (521)
T ss_pred CCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 4789999999999999999999999999999999999999999994 99999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC--ccccCCCCCC------CCCc
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPN------VSSE 152 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~ 152 (435)
++++++||+++|++++|+++.++.+++..+++.+++++++++.+..+.+.......+. .+..+..... ....
T Consensus 69 ~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (521)
T PRK06187 69 YLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEY 148 (521)
T ss_pred HHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccH
Confidence 9999999999999999999999999999999999999999999888877766554432 1111111110 0000
Q ss_pred ccc-ccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHH
Q 013869 153 TTV-FDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALL 231 (435)
Q Consensus 153 ~~~-~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~ 231 (435)
... ..............+++++++|||||||.||++.++|+++.+........+++..+++++..+|++|..++.. .+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~ 227 (521)
T PRK06187 149 EELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGL-PY 227 (521)
T ss_pred HHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHH-HH
Confidence 000 0001111133456789999999999999999999999999988888888889999999999999999998875 55
Q ss_pred HHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEec
Q 013869 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (435)
Q Consensus 232 ~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~ 311 (435)
.++..|+++++++.+++..++.. ++++++|.++++|+++..+++..+. ....++++|.+++|
T Consensus 228 ~~l~~G~~~v~~~~~~~~~~~~~----------l~~~~~t~l~~~p~~~~~l~~~~~~--------~~~~~~~l~~v~~~ 289 (521)
T PRK06187 228 LALMAGAKQVIPRRFDPENLLDL----------IETERVTFFFAVPTIWQMLLKAPRA--------YFVDFSSLRLVIYG 289 (521)
T ss_pred HHHHhCCEEEecCCCCHHHHHHH----------HHHhCCeEEEchHHHHHHHHcCcCC--------CccCcchhhEEEEc
Confidence 59999999999999888888887 5669999999999999999887543 23457889999999
Q ss_pred CCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCCC------CCCCccceecCCCeEEEecCCCCCCCC--c-cce
Q 013869 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGA------RKAGTVGNPLPGVQVKIAEDESGSDAA--G-VGE 382 (435)
Q Consensus 312 G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~------~~~~~~G~p~~~~~~~i~d~~~~~~~~--~-~Ge 382 (435)
|++++.++++.|.+.+++++++.||+||++.++....... ....++|+|+++++++|+|+++..++. + .||
T Consensus 290 Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~~Ge 369 (521)
T PRK06187 290 GAALPPALLREFKEKFGIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGEVGE 369 (521)
T ss_pred CcCCCHHHHHHHHHHhCcchheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCCeeE
Confidence 9999999999999999999999999999987655433222 267789999999999999998887665 5 799
Q ss_pred EEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 383 ICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 383 l~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|+++|+.++.||+++++.+...|. ++||+|||+|+++++|.+++.||.+|+|
T Consensus 370 l~v~~~~~~~~y~~~~~~~~~~~~-~~~~~tGD~~~~~~~g~~~~~GR~~~~i 421 (521)
T PRK06187 370 IIVRGPWLMQGYWNRPEATAETID-GGWLHTGDVGYIDEDGYLYITDRIKDVI 421 (521)
T ss_pred EEEECcchhhhhcCCHHHHHHHhh-CCceeccceEEEcCCCCEEEeecccceE
Confidence 999999999999999998888885 6799999999999999999999999874
No 51
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-54 Score=433.54 Aligned_cols=395 Identities=23% Similarity=0.334 Sum_probs=309.2
Q ss_pred hHHHHHHHhcccCCCeeEEEe--CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH
Q 013869 2 EVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~ 79 (435)
++.+.|.++|+++|+++|++. .++.+||+||.++++++|+.|.+. |+++|++|+++++|++
T Consensus 15 ~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-----------------g~~~g~~V~i~~~~~~ 77 (540)
T PRK05857 15 TVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQ-----------------SVSRGSRVLVISDNGP 77 (540)
T ss_pred chHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHh-----------------CcCCCCEEEEEcCCCH
Confidence 578899999999999999985 346899999999999999999994 9999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccC-CccccCCCCCCCCCccccccc
Q 013869 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-AKFSLIPPVPNVSSETTVFDQ 158 (435)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 158 (435)
++++++|||+++|++++|+++.++.+++.++++.++++++++++.............. .....+...............
T Consensus 78 e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (540)
T PRK05857 78 ETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDA 157 (540)
T ss_pred HHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecccccccccccccc
Confidence 9999999999999999999999999999999999999999999875432211111000 001111000000000000000
Q ss_pred hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHH----hccCCCCCeeEEeecchhhhHHHHHHHHHH
Q 013869 159 SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE----AWEYTSADQFLHCLPLHHVHGLFNALLAPL 234 (435)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l 234 (435)
...........+++++++|||||||.||+|.++|+++.++...... ......+++++..+|++|..+++ ..+.++
T Consensus 158 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~-~~~~~l 236 (540)
T PRK05857 158 ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW-WILTCL 236 (540)
T ss_pred cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHH-HHHHHh
Confidence 0011123456789999999999999999999999999876544322 23455678999999999999987 478889
Q ss_pred HcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCC
Q 013869 235 YAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSA 314 (435)
Q Consensus 235 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~ 314 (435)
..|+++++ .+.++..+++. +++|++|++.++|+++..+++..+. ...+++++|.+++||++
T Consensus 237 ~~G~~~v~-~~~~~~~~~~~----------i~~~~it~~~~~P~~~~~l~~~~~~--------~~~~~~~lr~~~~gG~~ 297 (540)
T PRK05857 237 MHGGLCVT-GGENTTSLLEI----------LTTNAVATTCLVPTLLSKLVSELKS--------ANATVPSLRLVGYGGSR 297 (540)
T ss_pred hcceeEEe-cCCChhHHHHH----------HHhcCcceEEeChHHHHHHHhcccc--------CCCcCccceEEEEcCcc
Confidence 99999876 44577777777 6779999999999999999875332 22357899999999999
Q ss_pred CCHHHHHHHHHHhCCcccccccCccccchhccCCCC-----CCCCCccceecCCCeEEEecCCCCCC------C-Cccce
Q 013869 315 LPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG-----ARKAGTVGNPLPGVQVKIAEDESGSD------A-AGVGE 382 (435)
Q Consensus 315 l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~-----~~~~~~~G~p~~~~~~~i~d~~~~~~------~-~~~Ge 382 (435)
++....+ |.+.+++++++.||+||++..+...... ..+.+++|+|++|++++|+|+++... + +..||
T Consensus 298 ~~~~~~~-~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Ge 376 (540)
T PRK05857 298 AIAADVR-FIEATGVRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGT 376 (540)
T ss_pred CCchhHH-HHHHhCCeeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcce
Confidence 9888774 6667799999999999997543321111 12457899999999999999877631 2 23699
Q ss_pred EEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 383 ICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 383 l~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|+++|+.++.||+++++.+.+.|. +|||+|||+|++|+||++++.||.+|+|
T Consensus 377 l~v~g~~~~~GY~~~~~~t~~~~~-~g~~~TGDlg~~d~~g~l~~~GR~~~~i 428 (540)
T PRK05857 377 LWIKSPANMLGYWNNPERTAEVLI-DGWVNTGDLLERREDGFFYIKGRSSEMI 428 (540)
T ss_pred EEEeCcchhhhhhCCccchhhhcC-CCceeccceEEEcCCceEEEeccccccE
Confidence 999999999999999999988884 7999999999999999999999999986
No 52
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=7.9e-54 Score=427.29 Aligned_cols=397 Identities=24% Similarity=0.392 Sum_probs=328.8
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.+.|.+.++++|+++|+.+.++++||+||.+++.++|++|.+. |+++|++|+++++|++++
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~-----------------g~~~~~~V~i~~~n~~~~ 63 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGL-----------------GLARGERVAIYLDKRLET 63 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcCCCHHH
Confidence 467899999999999999999999999999999999999999984 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC--ccccCCCCCCCC-------Cc
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPNVS-------SE 152 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------~~ 152 (435)
+++++||+.+|++++|+++..+.+++..+++.+++++++++.+..+.+......... .+..+....... ..
T Consensus 64 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (515)
T TIGR03098 64 VTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSW 143 (515)
T ss_pred HHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccH
Confidence 999999999999999999999999999999999999999998776655444333211 111111110000 00
Q ss_pred cccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHH
Q 013869 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLA 232 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~ 232 (435)
.................+++++++|||||||.||+|.+||+++..++......+++..+++++..+|++|..++. .++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~ 222 (515)
T TIGR03098 144 PKLLALGDADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFN-QLTT 222 (515)
T ss_pred HHhhccccccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHH-HHHH
Confidence 000000011112234567899999999999999999999999999998888888899999999999999999986 5899
Q ss_pred HHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecC
Q 013869 233 PLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (435)
Q Consensus 233 ~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G 312 (435)
++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+... ....++++|.++++|
T Consensus 223 ~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~---------~~~~~~~l~~~~~~g 283 (515)
T TIGR03098 223 AFYVGATVVLHDYLLPRDVLKA----------LEKHGITGLAAVPPLWAQLAQLDW---------PESAAPSLRYLTNSG 283 (515)
T ss_pred HHHcCCEEEEcCCCCHHHHHHH----------HHHcCCceEecChHHHHHHHhccc---------CCCCccceEEEEecC
Confidence 9999999999999999998888 566899999999999999876311 113567899999999
Q ss_pred CCCCHHHHHHHHHHh-CCcccccccCccccchhccCC-CCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCC
Q 013869 313 SALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPS 389 (435)
Q Consensus 313 ~~l~~~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~-~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~ 389 (435)
+++++++.+.+++.+ +..+++.||+||++....... ....+++++|+|+++++++|+|+++..++.+ .|||+++|+.
T Consensus 284 ~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g~~ 363 (515)
T TIGR03098 284 GAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLREDGSECAPGEEGELVHRGAL 363 (515)
T ss_pred CcCCHHHHHHHHHHCCCCeEeeeeccccccceEecccccccCCCCCcceecCCCEEEEECCCCCCCCCCCceEEEEcCch
Confidence 999999999999988 678999999999875444322 2235678999999999999999888877655 7999999999
Q ss_pred ccccccCCchhccccccc-----------CCccccCceEEEcCCccEEEecccccCC
Q 013869 390 LFKEYWKLPKVTKDSFTA-----------DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 390 ~~~gy~~~~~~~~~~~~~-----------~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++.||+++++.+...|.+ ++||+|||+|++++||++++.||.+|+|
T Consensus 364 ~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i 420 (515)
T TIGR03098 364 VAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMI 420 (515)
T ss_pred hhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccce
Confidence 999999999888776643 2489999999999999999999999986
No 53
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.3e-53 Score=425.76 Aligned_cols=398 Identities=26% Similarity=0.382 Sum_probs=323.5
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC-----cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeC
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~ 76 (435)
++.+.|.+.++++|+++|++..+ +.+||+||+++++++|.+|.+ +|+++||+|+++++
T Consensus 8 ~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~-----------------~g~~~~~~v~i~~~ 70 (517)
T PRK08008 8 HLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYS-----------------LGIRKGDKVALHLD 70 (517)
T ss_pred cHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 57899999999999999999753 789999999999999999998 49999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC---ccccCCCC-CCCCCc
Q 013869 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA---KFSLIPPV-PNVSSE 152 (435)
Q Consensus 77 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~ 152 (435)
|+++++++++||+++|++++++++..+.+++.+++++++++.++++.+..+.+.+....... .+...... ......
T Consensus 71 n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (517)
T PRK08008 71 NCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGV 150 (517)
T ss_pred CCHHHHHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccc
Confidence 99999999999999999999999999999999999999999999999887776655433211 11111100 000000
Q ss_pred ccccc---c--hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHH
Q 013869 153 TTVFD---Q--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF 227 (435)
Q Consensus 153 ~~~~~---~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~ 227 (435)
..... . ..........++++++++|||||||.||+|.++|.++............+..++++++.+|++|..+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 230 (517)
T PRK08008 151 SSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQC 230 (517)
T ss_pred cCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHH
Confidence 00000 0 000112234568999999999999999999999999986554444444678899999999999998877
Q ss_pred HHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEE
Q 013869 228 NALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307 (435)
Q Consensus 228 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~ 307 (435)
..++.++..|+++++.+++++..+++. ++++++|++.++|.+++.++...... ......++.
T Consensus 231 ~~~~~~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~--------~~~~~~l~~ 292 (517)
T PRK08008 231 TAAMAAFSAGATFVLLEKYSARAFWGQ----------VCKYRATITECIPMMIRTLMVQPPSA--------NDRQHCLRE 292 (517)
T ss_pred HHHHHHHhcCcEEEEccccCHHHHHHH----------HHHcCCcEEechHHHHHHHHhCCCcc--------cccccccee
Confidence 788999999999999999999988888 56689999999999999887643211 112346777
Q ss_pred EEecCCCCCHHHHHHHHHHhCCcccccccCccccchhcc-CCCCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEE
Q 013869 308 MMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISN-PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICV 385 (435)
Q Consensus 308 i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~-~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v 385 (435)
+.++ .+++.++.+.|.+.++.++++.||+||++..++. .........++|+|+++++++++|+++...+.+ .|||++
T Consensus 293 ~~~~-~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~Gel~v 371 (517)
T PRK08008 293 VMFY-LNLSDQEKDAFEERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRDDHNRPLPAGEIGEICI 371 (517)
T ss_pred eEEe-cCCCHHHHHHHHHHhCCeEEeeccccccccccccCCccccccCCccccCCCCcEEEEECCCCCCCCCCCcceEEE
Confidence 7765 4789999999999999999999999999764442 222334567899999999999999988887766 799999
Q ss_pred ec---CCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 386 KS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 386 ~~---~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+| ++++.||+++++.+.+.|+.+|||+|||+|++|+||++++.||.+|+|
T Consensus 372 ~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i 424 (517)
T PRK08008 372 KGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMI 424 (517)
T ss_pred eCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceE
Confidence 97 689999999999999999889999999999999999999999999986
No 54
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.6e-54 Score=429.72 Aligned_cols=397 Identities=25% Similarity=0.397 Sum_probs=327.8
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
||+.+.|.++++.+|+++|++..++.+||.||.++++++|.+|.+. |+++|++|+++++|+++
T Consensus 17 ~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~-----------------g~~~g~~V~i~~~~~~~ 79 (542)
T PRK07786 17 QNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRR-----------------GVGFGDRVLILMLNRTE 79 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 5889999999999999999999999999999999999999999984 99999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCc--cccCCCCC--C-CCCcccc
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK--FSLIPPVP--N-VSSETTV 155 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~-~~~~~~~ 155 (435)
++++++||+++|++++|+++..+.+++..+++.+++++++++....+.+.......+.. ...+.... . .......
T Consensus 80 ~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (542)
T PRK07786 80 FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLL 159 (542)
T ss_pred HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHh
Confidence 99999999999999999999999999999999999999999988776655443322211 11110000 0 0000000
Q ss_pred ccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccC-CCCCeeEEeecchhhhHHHHHHHHHH
Q 013869 156 FDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEY-TSADQFLHCLPLHHVHGLFNALLAPL 234 (435)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~~~~l~~~pl~~~~g~~~~~~~~l 234 (435)
..............+++++++|||||||.||+|.++|+++...+......+++ ...++++...|++|.+|+. .++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~~l 238 (542)
T PRK07786 160 AEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIG-SMLPGL 238 (542)
T ss_pred hccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHH-HHHHHH
Confidence 00001112234456789999999999999999999999999888887777776 5778999999999999985 689999
Q ss_pred HcCCEEEEcC--CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecC
Q 013869 235 YAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (435)
Q Consensus 235 ~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G 312 (435)
..|+++++.+ .+++..+++. ++++++|++.++|+++..+++...... ...++|.+++||
T Consensus 239 ~~G~~~v~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~l~~l~~~~~~~~---------~~~~lr~i~~gg 299 (542)
T PRK07786 239 LLGAPTVIYPLGAFDPGQLLDV----------LEAEKVTGIFLVPAQWQAVCAEQQARP---------RDLALRVLSWGA 299 (542)
T ss_pred HccCEEEEccCCCcCHHHHHHH----------HHHcCCeEEEehHHHHHHHHhCcccCc---------cCcceEEEEECC
Confidence 9999999865 5688888888 666999999999999999987643211 112689999999
Q ss_pred CCCCHHHHHHHHHHh-CCcccccccCccccchhccCCC--CCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecC
Q 013869 313 SALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPLR--GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSP 388 (435)
Q Consensus 313 ~~l~~~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~--~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~ 388 (435)
+++++++++.+.+.| +.++++.||+||++.+.+.... ......++|+|++++.++|+|+++...+.+ .|||+++|+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~ 379 (542)
T PRK07786 300 APASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGEVGEIVYRAP 379 (542)
T ss_pred CCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCCceEEEEECh
Confidence 999999999999998 7899999999999866543222 224567899999999999999888887766 799999999
Q ss_pred CccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 389 SLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 389 ~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
.++.||+++++.+...|. +|||+|||++++++||++++.||.+|+|
T Consensus 380 ~~~~gy~~~~~~~~~~f~-~~~~~TGDl~~~~~~g~~~i~GR~~d~i 425 (542)
T PRK07786 380 TLMSGYWNNPEATAEAFA-GGWFHSGDLVRQDEEGYVWVVDRKKDMI 425 (542)
T ss_pred hhhhhhcCCHHHHHHHhh-CCcccccceEEEcCCceEEEEecccceE
Confidence 999999999999998884 7999999999999999999999999975
No 55
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=9.7e-54 Score=428.91 Aligned_cols=396 Identities=20% Similarity=0.284 Sum_probs=319.1
Q ss_pred ChHHHHHHHhcccCCCeeEEEeC--CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC
Q 013869 1 MEVFKAAYKKGSMARDSVAIRAD--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~ 78 (435)
+|+.+.|.+++.++|+++|+++. ++.+||.||.+++.++|..|.+. |+++|++|+++++|+
T Consensus 28 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~-----------------g~~~g~~V~i~~~~~ 90 (546)
T PLN02330 28 LTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSL-----------------GLRKGQVVVVVLPNV 90 (546)
T ss_pred CcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCc
Confidence 47889999999999999999973 67999999999999999999994 999999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCC--CCCCccccc
Q 013869 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVP--NVSSETTVF 156 (435)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 156 (435)
++++++++||+++|++++|+++..+.+++.++++.++++++++++...+.+.... ..+..+.... .........
T Consensus 91 ~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~ 166 (546)
T PLN02330 91 AEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLG----LPVIVLGEEKIEGAVNWKELL 166 (546)
T ss_pred hHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcC----CcEEEecCCCCCCcccHHHHH
Confidence 9999999999999999999999999999999999999999999998777654321 1111111100 000000000
Q ss_pred cc----hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhcc--CCCCCeeEEeecchhhhHHHHHH
Q 013869 157 DQ----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YTSADQFLHCLPLHHVHGLFNAL 230 (435)
Q Consensus 157 ~~----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~l~~~pl~~~~g~~~~~ 230 (435)
.. ...........+++++++|||||||.||+|.++|+++..++.......+ ....++.+..+|++|.+++...+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~ 246 (546)
T PLN02330 167 EAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGIC 246 (546)
T ss_pred hhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHH
Confidence 00 0001122345689999999999999999999999998876654222221 22346789999999999987678
Q ss_pred HHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhcc--ccEEE
Q 013869 231 LAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK--QLRLM 308 (435)
Q Consensus 231 ~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~--~lr~i 308 (435)
+.++..|+++++.+.+++..++.. ++++++|.+.++|+++..+++.... ...+++ ++|.+
T Consensus 247 ~~~l~~g~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~--------~~~~~~~~~l~~i 308 (546)
T PLN02330 247 CATLRNKGKVVVMSRFELRTFLNA----------LITQEVSFAPIVPPIILNLVKNPIV--------EEFDLSKLKLQAI 308 (546)
T ss_pred HHHhhcCCEEEEecccCHHHHHHH----------HHHcCCeeeecCCHHHHHHHhCccc--------cccccchheeeeE
Confidence 889999999999999999998888 5669999999999999999875321 111222 57999
Q ss_pred EecCCCCCHHHHHHHHHHh-CCcccccccCccccchhccCCC-----CCCCCCccceecCCCeEEEec-CCCCCCCCc-c
Q 013869 309 MCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPLR-----GARKAGTVGNPLPGVQVKIAE-DESGSDAAG-V 380 (435)
Q Consensus 309 ~~~G~~l~~~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~-----~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~~-~ 380 (435)
++||+++++++++.|.+.| +.++++.||+||++.+...... ......++|.|+++++++++| +++...+.+ .
T Consensus 309 ~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~ 388 (546)
T PLN02330 309 MTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTP 388 (546)
T ss_pred EEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCc
Confidence 9999999999999999998 8999999999999765442211 123456899999999999998 456666666 7
Q ss_pred ceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 381 GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 381 Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|||+++|+.++.||+++++.+...++.+|||+|||+|++++||++++.||.+|+|
T Consensus 389 Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i 443 (546)
T PLN02330 389 GELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELI 443 (546)
T ss_pred eEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhh
Confidence 9999999999999999999999888889999999999999999999999999975
No 56
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.8e-54 Score=437.21 Aligned_cols=394 Identities=22% Similarity=0.314 Sum_probs=309.0
Q ss_pred ChHHHHHHHhcccCCCeeEEEeC---------CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeE
Q 013869 1 MEVFKAAYKKGSMARDSVAIRAD---------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARI 71 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~---------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V 71 (435)
+|+.+.|.++++.+|+++|++.. .+.+||+||.++++++|++|.+ .+++||+|
T Consensus 21 ~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~------------------~~~~gd~V 82 (631)
T PRK07769 21 TNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQ------------------VTKPGDRV 82 (631)
T ss_pred CCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHH------------------hcCCCCEE
Confidence 36889999999999999999863 2579999999999999999987 37999999
Q ss_pred EEEeCCCHHHHHHHHHHHHhCCeEEeC-CCCCC--HHHHHHHHhcCCccEEEechhhHHHHHHHHhccC----CccccCC
Q 013869 72 GIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYP--ESELLHVMHDSDISMVLSTEDYREVLQNVASKSG----AKFSLIP 144 (435)
Q Consensus 72 ~i~~~~~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~ 144 (435)
+++++|++++++++|||+++|++++|+ ++..+ .+++.++++.+++++++++.+..+.+.......+ ..+..+.
T Consensus 83 ~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (631)
T PRK07769 83 AILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVD 162 (631)
T ss_pred EEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcc
Confidence 999999999999999999999999999 45554 5789999999999999999887666544332211 1111111
Q ss_pred CCCCCCCccccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhh
Q 013869 145 PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVH 224 (435)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 224 (435)
..... . . .........++++++++|||||||.||+|.++|+++...+......+++.++++++..+|++|..
T Consensus 163 ---~~~~~--~-~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~ 234 (631)
T PRK07769 163 ---AVPDE--V-G--ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDM 234 (631)
T ss_pred ---ccccc--c-c--cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCch
Confidence 10000 0 0 00111234678999999999999999999999999998888888888899999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEcCC--c--chhHHHHHHHhhcCCCCCcccccc---ceeccccHHHHHHHhhhccccHHHHHH
Q 013869 225 GLFNALLAPLYAGATVEFMPK--F--SVRGIWQRWRESYPVNGNRAGEAI---TAFTGVPTMYTRLIQGYEAMDTELQAA 297 (435)
Q Consensus 225 g~~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~~~~~~~~~~~i~~~~~---t~~~~~P~~~~~l~~~~~~~~~~~~~~ 297 (435)
|+.. ++.++..|++++++++ + ++..+++. +.++++ +.+..+|.++..++.... ... ...
T Consensus 235 gl~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~~~~p~~~~~l~~~~~-~~~--~~~ 300 (631)
T PRK07769 235 GLIT-VLLPALLGHYITFMSPAAFVRRPGRWIRE----------LARKPGGTGGTFSAAPNFAFEHAAARG-LPK--DGE 300 (631)
T ss_pred hhHH-HHHHHhhCCeEEEEChHHHHhCHHHHHHH----------HHhhccccCceEeeCCchHHHHHHhhc-cch--hcc
Confidence 9875 6677888999988764 3 66666666 444554 889999998877764211 000 000
Q ss_pred hhhhccccEEEEecCCCCCHHHHHHHHHHhC---C---cccccccCccccchhccCCCCC--------------------
Q 013869 298 SASAAKQLRLMMCGSSALPLPVMQQWETITG---H---RLLERYGMTEFVMAISNPLRGA-------------------- 351 (435)
Q Consensus 298 ~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~---~---~l~~~YG~tE~~~~~~~~~~~~-------------------- 351 (435)
...+++++|.+++||+++++++.+.|.+.|+ + .+++.||+||++.+++......
T Consensus 301 ~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 380 (631)
T PRK07769 301 PPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEV 380 (631)
T ss_pred cCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEec
Confidence 1246789999999999999999999999873 2 5999999999876554321110
Q ss_pred -------CCCCccceecCCCeEEEec-CCCCCCCCc-cceEEEecCCccccccCCchhccccccc---------------
Q 013869 352 -------RKAGTVGNPLPGVQVKIAE-DESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTA--------------- 407 (435)
Q Consensus 352 -------~~~~~~G~p~~~~~~~i~d-~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~--------------- 407 (435)
....++|+|.++++++|+| +++..++.+ .||||++|++++.||+++++.+.+.|..
T Consensus 381 ~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~ 460 (631)
T PRK07769 381 PADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAP 460 (631)
T ss_pred CCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcc
Confidence 0124789999999999999 456776666 7999999999999999999999988842
Q ss_pred --CCccccCceEEEcCCccEEEecccccCC
Q 013869 408 --DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 408 --~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+|||+|||+|++ +||+|+|+||.||+|
T Consensus 461 ~~~gw~~TGDlg~~-~dG~l~i~GR~~d~I 489 (631)
T PRK07769 461 DDALWVRTGDYGVY-FDGELYITGRVKDLV 489 (631)
T ss_pred cCCCeeeccccccE-ECCEEEEEcccccEE
Confidence 489999999999 499999999999986
No 57
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6.8e-54 Score=434.96 Aligned_cols=394 Identities=21% Similarity=0.295 Sum_probs=306.5
Q ss_pred ChHHHHHHHhcccCCCeeEEEeC---------CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeE
Q 013869 1 MEVFKAAYKKGSMARDSVAIRAD---------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARI 71 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~---------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V 71 (435)
+|+.+.|.++++++|+++|++.. .+.+||+||.++++++|++|.+ .+++||+|
T Consensus 34 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~------------------~~~~gd~V 95 (612)
T PRK12476 34 TTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQ------------------VAGPGDRV 95 (612)
T ss_pred CcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHH------------------hcCCCCEE
Confidence 47888999999999999999862 2489999999999999999987 48999999
Q ss_pred EEEeCCCHHHHHHHHHHHHhCCeEEeC-CCCCC--HHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC----ccccCC
Q 013869 72 GIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYP--ESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA----KFSLIP 144 (435)
Q Consensus 72 ~i~~~~~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~----~~~~~~ 144 (435)
+++++|++++++++|||+++|++++|+ ++.++ .+++.++++.+++++++++++..+.+......... .+..+.
T Consensus 96 ~l~~~n~~e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 175 (612)
T PRK12476 96 AILAPQGIDYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAID 175 (612)
T ss_pred EEECCCChhHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEec
Confidence 999999999999999999999999999 57766 78999999999999999998887766544332211 111111
Q ss_pred CCCCCCCccccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhcc-CCCCCeeEEeecchhh
Q 013869 145 PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE-YTSADQFLHCLPLHHV 223 (435)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~l~~~pl~~~ 223 (435)
. .... ...........++++++++|||||||.||||.++|+++..++......++ +.+.+++++++|++|.
T Consensus 176 ~---~~~~-----~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~ 247 (612)
T PRK12476 176 A---IPDS-----AGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHD 247 (612)
T ss_pred c---cccc-----ccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccc
Confidence 1 1000 00011112346789999999999999999999999999888777766677 7888999999999999
Q ss_pred hHHHHHHHHHHHcCCEEEEcCC--c--chhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhh
Q 013869 224 HGLFNALLAPLYAGATVEFMPK--F--SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299 (435)
Q Consensus 224 ~g~~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 299 (435)
.|+.. ++.++..|+++++..+ + ++..+++.+.+ .+++++.+..+|+++..++...... .....
T Consensus 248 ~g~~~-~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~--------~~~~~t~~~~~P~~~~~l~~~~~~~----~~~~~ 314 (612)
T PRK12476 248 MGLSM-IGFPAVYGGHSTLMSPTAFVRRPQRWIKALSE--------GSRTGRVVTAAPNFAYEWAAQRGLP----AEGDD 314 (612)
T ss_pred cchHH-HHHHHhcCCeEEEECHHHHHHHHHHHHHHHhh--------hccCCeEEEeCCcHHHHHHHHhcCh----hhhcC
Confidence 99865 4445555666555543 2 56666666321 3478999999999988887631100 00112
Q ss_pred hhccccEEEEecCCCCCHHHHHHHHHHh---CC---cccccccCccccchhccCCCCC----------------------
Q 013869 300 SAAKQLRLMMCGSSALPLPVMQQWETIT---GH---RLLERYGMTEFVMAISNPLRGA---------------------- 351 (435)
Q Consensus 300 ~~l~~lr~i~~~G~~l~~~l~~~~~~~~---~~---~l~~~YG~tE~~~~~~~~~~~~---------------------- 351 (435)
.+++++| +++||++++.++.+.|.+.| ++ ++++.||+||++..++......
T Consensus 315 ~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 393 (612)
T PRK12476 315 IDLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAA 393 (612)
T ss_pred cchhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCC
Confidence 3578899 99999999999999999987 43 4899999999875443211100
Q ss_pred -----CCCCccceecCCCeEEEecCC-CCCCCCc-cceEEEecCCccccccCCchhcccccc------------------
Q 013869 352 -----RKAGTVGNPLPGVQVKIAEDE-SGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFT------------------ 406 (435)
Q Consensus 352 -----~~~~~~G~p~~~~~~~i~d~~-~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~------------------ 406 (435)
....++|+|+++++++|+|++ ++.++.+ .|||+++|++++.||+++++.+.+.|.
T Consensus 394 ~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~ 473 (612)
T PRK12476 394 DAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAAD 473 (612)
T ss_pred CCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccC
Confidence 012478999999999999987 7877766 799999999999999999999988884
Q ss_pred cCCccccCceEEEcCCccEEEecccccCC
Q 013869 407 ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 407 ~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+++||+|||+|++ +||+|+|+||+||+|
T Consensus 474 ~~~w~~TGDlg~~-~dG~l~i~GR~~d~I 501 (612)
T PRK12476 474 DGTWLRTGDLGVY-LDGELYITGRIADLI 501 (612)
T ss_pred CCCeeecccccee-ECCEEEEEeccCcEE
Confidence 1359999999998 599999999999986
No 58
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=4.3e-54 Score=471.87 Aligned_cols=388 Identities=21% Similarity=0.343 Sum_probs=326.5
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.+.|.++++++|+++|+++.++.+||+||.++++++|++|.+. |+++|++|++++++++++
T Consensus 459 ~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~-----------------g~~~g~~V~l~~~~~~~~ 521 (1296)
T PRK10252 459 TLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRER-----------------GVKPGDSVAVALPRSVFL 521 (1296)
T ss_pred CHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 578899999999999999999999999999999999999999995 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhh
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
+++++||+++|++++|+++.++.+++.++++.+++++++++.+....+... . ..... ..... ......
T Consensus 522 i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~----~-~~~~~-~~~~~------~~~~~~ 589 (1296)
T PRK10252 522 TLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV----P-DLTSL-CYNAP------LAPQGA 589 (1296)
T ss_pred HHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC----C-Cceee-ecccc------cccccC
Confidence 999999999999999999999999999999999999999998765543221 0 00000 00000 000001
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEE
Q 013869 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (435)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~ 241 (435)
.+.....++++++++|||||||.||||.++|+++.+.+.+....+++.+.++++...|++|..+++ .++.++..|++++
T Consensus 590 ~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~l~~G~~l~ 668 (1296)
T PRK10252 590 APLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVW-EFFWPFIAGAKLV 668 (1296)
T ss_pred CCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHH-HHHHHHhCCCEEE
Confidence 111233678999999999999999999999999999999999999999999999999999999876 6999999999999
Q ss_pred EcCC---cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHH
Q 013869 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (435)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~ 318 (435)
+.++ .++..+++. +.++++|++.++|+++..+++..... .....++++|.+++||++++++
T Consensus 669 ~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~Ps~l~~l~~~~~~~------~~~~~~~~lr~i~~gGe~l~~~ 732 (1296)
T PRK10252 669 MAEPEAHRDPLAMQQF----------FAEYGVTTTHFVPSMLAAFVASLTPE------GARQSCASLRQVFCSGEALPAD 732 (1296)
T ss_pred ECChhccCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhhhccc------cccccCCCccEEEEecCCCCHH
Confidence 9874 466667666 66699999999999999988753211 1122467899999999999999
Q ss_pred HHHHHHHHhCCcccccccCccccchhccCCC-C------CCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCc
Q 013869 319 VMQQWETITGHRLLERYGMTEFVMAISNPLR-G------ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSL 390 (435)
Q Consensus 319 l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~------~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~ 390 (435)
+.+.|.+.++.++++.||+||++..++.... . .....++|+|+++++++|+|++++.++.+ .|||+++|+.+
T Consensus 733 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~g~~Gel~i~g~~~ 812 (1296)
T PRK10252 733 LCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMRPVPPGVAGDLYLTGIQL 812 (1296)
T ss_pred HHHHHHhcCCCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCCCCCCCCCCceEEEeccccc
Confidence 9999999889999999999999865542211 1 23356899999999999999999988887 79999999999
Q ss_pred cccccCCchhcccccccC------CccccCceEEEcCCccEEEecccccCC
Q 013869 391 FKEYWKLPKVTKDSFTAD------GFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 391 ~~gy~~~~~~~~~~~~~~------g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+.||+++++.|.+.|..+ +||+|||+|++++||+++++||.||+|
T Consensus 813 ~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~i 863 (1296)
T PRK10252 813 AQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQL 863 (1296)
T ss_pred chhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeE
Confidence 999999999999998543 499999999999999999999999975
No 59
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2e-53 Score=428.38 Aligned_cols=400 Identities=26% Similarity=0.350 Sum_probs=326.5
Q ss_pred ChHHHHHHHhcccCCCeeEEEe--CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC
Q 013869 1 MEVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~ 78 (435)
++|.+.|.+.++++|+++|++. .++.+||+||.++++++|++|.+. |+++|++|+++++|+
T Consensus 16 ~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------gi~~g~~V~i~~~~~ 78 (559)
T PRK08315 16 QTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLAL-----------------GIEKGDRVGIWAPNV 78 (559)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCC
Confidence 4788999999999999999987 567899999999999999999994 999999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhH-----HHHHHHHhcc-------------CC--
Q 013869 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKS-------------GA-- 138 (435)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~-------------~~-- 138 (435)
+++++++|||+++|++++|+++..+.+++..+++.+++++++++.... ..+.+..... +.
T Consensus 79 ~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (559)
T PRK08315 79 PEWVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELR 158 (559)
T ss_pred hHHHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCce
Confidence 999999999999999999999999999999999999999999987532 1222211111 00
Q ss_pred ccccCCCCC--CCCCccccc-------cchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCC
Q 013869 139 KFSLIPPVP--NVSSETTVF-------DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT 209 (435)
Q Consensus 139 ~~~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~ 209 (435)
......... ......... .............+++++++|||||||.||+|.++|+++..++......+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~ 238 (559)
T PRK08315 159 RVIFLGDEKHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLT 238 (559)
T ss_pred eEEeecccCCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCC
Confidence 000000000 000000000 00001112234578899999999999999999999999999998888888999
Q ss_pred CCCeeEEeecchhhhHHHHHHHHHHHcCCEEE-EcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhc
Q 013869 210 SADQFLHCLPLHHVHGLFNALLAPLYAGATVE-FMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (435)
Q Consensus 210 ~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 288 (435)
++++++...|++|..++...++.++..|++++ ....+++..+++. +.++++|++.++|+++..++....
T Consensus 239 ~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~~~~~~~ 308 (559)
T PRK08315 239 EEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAA----------VEEERCTALYGVPTMFIAELDHPD 308 (559)
T ss_pred CCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHH----------HHHcCCeEEecchHHHHHHHhCcc
Confidence 99999999999999998888999999999998 4556788888887 566999999999999988876422
Q ss_pred cccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCc-ccccccCccccchhccCCCC---CCCCCccceecCCC
Q 013869 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHR-LLERYGMTEFVMAISNPLRG---ARKAGTVGNPLPGV 364 (435)
Q Consensus 289 ~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~-l~~~YG~tE~~~~~~~~~~~---~~~~~~~G~p~~~~ 364 (435)
.....++++|.++++|++++.++++.|.+.++.. +++.||+||++.+++..... .....++|+|++++
T Consensus 309 --------~~~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~ 380 (559)
T PRK08315 309 --------FARFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHL 380 (559)
T ss_pred --------cCCCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCc
Confidence 1223578999999999999999999999988764 99999999998765532221 23467899999999
Q ss_pred eEEEecCC-CCCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 365 QVKIAEDE-SGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 365 ~~~i~d~~-~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+++|+|++ ++.++.+ .|||+++|+.++.||+++++.++..|..++||+|||+|++++||.++++||.+|+|
T Consensus 381 ~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i 453 (559)
T PRK08315 381 EVKIVDPETGETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMI 453 (559)
T ss_pred EEEEEcCccCCcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceE
Confidence 99999987 7777666 79999999999999999999999888778999999999999999999999999875
No 60
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-53 Score=428.57 Aligned_cols=401 Identities=24% Similarity=0.381 Sum_probs=320.7
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+++.+.|.++++++|+++|++..++.+||.||.++++++|.+|.++ .|+++||+|+++++|+++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~----------------~gi~~gd~V~i~~~n~~e 87 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQH----------------TDLVPGDRIAVQMPNVLQ 87 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHH
Confidence 3688999999999999999999899999999999999999999873 389999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCc-cccC------CCC-------
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLI------PPV------- 146 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~------~~~------- 146 (435)
++++++||+++|++++|+++.++.+++.++++.++++++++++...+.+.......... .... ...
T Consensus 88 ~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (562)
T PRK12492 88 YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNT 167 (562)
T ss_pred HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhccc
Confidence 99999999999999999999999999999999999999999876655443322211000 0000 000
Q ss_pred --C-------C--CCCccccccc-----hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhcc---
Q 013869 147 --P-------N--VSSETTVFDQ-----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--- 207 (435)
Q Consensus 147 --~-------~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--- 207 (435)
. . .......... ...........+++++++|||||||.||+|.++|+++..++......+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~ 247 (562)
T PRK12492 168 VVDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLG 247 (562)
T ss_pred ccccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccc
Confidence 0 0 0000000000 0000112345689999999999999999999999999877766555442
Q ss_pred ------CCC-CCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC-CcchhHHHHHHHhhcCCCCCccccccceeccccHH
Q 013869 208 ------YTS-ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM 279 (435)
Q Consensus 208 ------~~~-~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~ 279 (435)
... .++++..+|++|.+++...++..+..|.++++.. ++++..++.. ++++++|++.++|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~ 317 (562)
T PRK12492 248 PDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKE----------LGKWRFSALLGLNTL 317 (562)
T ss_pred ccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHH----------HHHhCCceeeCcHHH
Confidence 222 3477899999999998776777788888776654 4577777776 677999999999999
Q ss_pred HHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCC-CCCCCCccc
Q 013869 280 YTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVG 358 (435)
Q Consensus 280 ~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~~~G 358 (435)
+..+++..+. ...+++++|.+++||++++.++.+.|.+.+++++++.||+||++.+++.... .....+++|
T Consensus 318 ~~~l~~~~~~--------~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G 389 (562)
T PRK12492 318 FVALMDHPGF--------KDLDFSALKLTNSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGELARLGTVG 389 (562)
T ss_pred HHHHHhCcCc--------ccccccceeEEEeccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcccccCCccc
Confidence 9999875321 2235688999999999999999999999999999999999999876553322 223457899
Q ss_pred eecCCCeEEEecCCCCCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 359 NPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 359 ~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+|+++++++|+|+++..++.+ .|||+++|+.++.||+++++.+.+.|+.+|||+|||+|+++++|++++.||.+|+|
T Consensus 390 ~p~~~~~v~ivd~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i 467 (562)
T PRK12492 390 IPVPGTALKVIDDDGNELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLI 467 (562)
T ss_pred eecCCCEEEEECCCCCCCCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeE
Confidence 999999999999988887766 79999999999999999999999998778999999999999999999999999985
No 61
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=2.2e-53 Score=425.28 Aligned_cols=399 Identities=20% Similarity=0.299 Sum_probs=323.1
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.+.|.++++ |+++|+++.++++||+||+++++++|.+|.+. |+++|++|+++++|++++
T Consensus 26 ~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~-----------------g~~~g~~V~v~~~n~~~~ 86 (536)
T PRK10946 26 PLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQ-----------------GIKPGDTALVQLGNVAEF 86 (536)
T ss_pred cHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCChHHH
Confidence 57888988887 99999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhH-----HHHHHHHhccC-CccccCCCCCCCCCccc-
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSG-AKFSLIPPVPNVSSETT- 154 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~- 154 (435)
+++++||+++|++++++.+.....++..+++.++++.++++.... ..........+ .....+...........
T Consensus 87 ~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 166 (536)
T PRK10946 87 YITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDDA 166 (536)
T ss_pred HHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHHH
Confidence 999999999999888877777788899999999999999986431 11111211111 11111110000000000
Q ss_pred cccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHH-HHHHH
Q 013869 155 VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN-ALLAP 233 (435)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~-~~~~~ 233 (435)
..............++++++++|||||||.||+|.++|+++...+......+++.+++++++.+|++|.+++.. .++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~ 246 (536)
T PRK10946 167 INHPAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGV 246 (536)
T ss_pred hhCcccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHH
Confidence 00001111123456789999999999999999999999999999998888889999999999999999887653 57888
Q ss_pred HHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCC
Q 013869 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (435)
Q Consensus 234 l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~ 313 (435)
+..|+++++.+.+++...+.. ++++++|++.++|.++..+++.... ......++++|.+++||+
T Consensus 247 l~~g~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~~~~l~~~~~~------~~~~~~~~~l~~v~~gg~ 310 (536)
T PRK10946 247 FLAGGTVVLAPDPSATLCFPL----------IEKHQVNVTALVPPAVSLWLQAIAE------GGSRAQLASLKLLQVGGA 310 (536)
T ss_pred hhcCcEEEECCCCCHHHHHHH----------HHHhCCcEEEeChHHHHHHHhhhcc------cCccccccceeEEEECCC
Confidence 999999999998888888877 6669999999999999999875321 112235688999999999
Q ss_pred CCCHHHHHHHHHHhCCcccccccCccccchhccC-CCCCCCCCccceec-CCCeEEEecCCCCCCCCc-cceEEEecCCc
Q 013869 314 ALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPL-PGVQVKIAEDESGSDAAG-VGEICVKSPSL 390 (435)
Q Consensus 314 ~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~-~~~~~~~~~~G~p~-~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~ 390 (435)
++++++.+.|.+.+++++++.||+||++...... ........++|+|+ +++.++|+|++++.++.+ .|||+++|+.+
T Consensus 311 ~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~Gel~v~g~~~ 390 (536)
T PRK10946 311 RLSETLARRIPAELGCQLQQVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGEVGRLMTRGPYT 390 (536)
T ss_pred CCCHHHHHHHHHhcCCeEEEeecccccceeeecCCCccccccccCCcccCCCceEEEECCCCCCCCCCCccEEEEecCcc
Confidence 9999999999999999999999999975443321 11223457899998 799999999888887666 79999999999
Q ss_pred cccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 391 FKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 391 ~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+.||+++++.+...|+.+|||+|||+|++|+||++++.||.+|+|
T Consensus 391 ~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i 435 (536)
T PRK10946 391 FRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQI 435 (536)
T ss_pred chhhcCCcccchhhcccCCceecCceEEECCCCcEEEecccccee
Confidence 999999999999999889999999999999999999999999975
No 62
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.8e-54 Score=504.48 Aligned_cols=386 Identities=23% Similarity=0.354 Sum_probs=329.3
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
+++++|.++++++||++|+++.++++||+||.++++++|+.|.++ |+++|++|+|+++|++++
T Consensus 3096 ~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~-----------------gv~~g~~V~l~~~~s~~~ 3158 (3956)
T PRK12467 3096 LVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAI-----------------GVGPDVLVGVAVERSVEM 3158 (3956)
T ss_pred cHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHc-----------------CCCCCCeEEEEeCCCHHH
Confidence 688999999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhh
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
+++++||+++|++++|+++.++.+++.++++.+++++++++....+.+.... ......+. ... .......
T Consensus 3159 vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~---~~~~~~~~---~~~----~~~~~~~ 3228 (3956)
T PRK12467 3159 IVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPA---GDTALTLD---RLD----LNGYSEN 3228 (3956)
T ss_pred HHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhccccc---CCceeeec---chh----hcccCCC
Confidence 9999999999999999999999999999999999999999987654432110 00111111 000 0011111
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEE
Q 013869 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (435)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~ 241 (435)
.+.....+++++|++|||||||.||||.++|+++.+.+.+....+++.++|+++...|++|..+.. .++.+|..|++++
T Consensus 3229 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~l~ 3307 (3956)
T PRK12467 3229 NPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQE-RFLWTLICGGCLV 3307 (3956)
T ss_pred CCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHH-HHHHHHhCCCEEE
Confidence 122345789999999999999999999999999999999999999999999999999999998875 6999999999999
Q ss_pred EcCC--cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHH
Q 013869 242 FMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (435)
Q Consensus 242 ~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l 319 (435)
+++. +++..+++. +.++++|++.++|+++..+++.. ....++++|.+++||+++++++
T Consensus 3308 i~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~l~~l~~~~----------~~~~~~~lr~~~~gGe~~~~~~ 3367 (3956)
T PRK12467 3308 VRDNDLWDPEELWQA----------IHAHRISIACFPPAYLQQFAEDA----------GGADCASLDIYVFGGEAVPPAA 3367 (3956)
T ss_pred ECCcccCCHHHHHHH----------HHHcCCEEEEcCHHHHHHHHhcc----------cccCCCCceEEEEecCCCCHHH
Confidence 9986 677888887 66699999999999999997642 2235788999999999999999
Q ss_pred HHHHHHHh-CCcccccccCccccchhccCCC-C----CCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccc
Q 013869 320 MQQWETIT-GHRLLERYGMTEFVMAISNPLR-G----ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFK 392 (435)
Q Consensus 320 ~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~-~----~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~ 392 (435)
.++|.+.+ +.++++.||+||+++.++.... . .....++|+|++|++++|+|++++.++.+ .|||+|+|+.+++
T Consensus 3368 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~vp~G~~GEL~i~G~~v~~ 3447 (3956)
T PRK12467 3368 FEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQLNPVPVGVAGELYIGGVGLAR 3447 (3956)
T ss_pred HHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEECCCCCCCCCCCCceEEEcchhhhh
Confidence 99999887 5789999999999875542111 1 12346899999999999999999988887 7999999999999
Q ss_pred cccCCchhcccccccCC-------ccccCceEEEcCCccEEEecccccCC
Q 013869 393 EYWKLPKVTKDSFTADG-------FFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 393 gy~~~~~~~~~~~~~~g-------~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
||+++|+.|.++|..++ ||+|||+|++++||+|+|.||+||+|
T Consensus 3448 GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~i 3497 (3956)
T PRK12467 3448 GYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQV 3497 (3956)
T ss_pred hccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceE
Confidence 99999999999996554 69999999999999999999999986
No 63
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-53 Score=422.49 Aligned_cols=380 Identities=24% Similarity=0.397 Sum_probs=315.5
Q ss_pred HHhcccCCCeeEEEe--CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHH
Q 013869 8 YKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (435)
Q Consensus 8 ~~~~~~~p~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~ 85 (435)
..+++.+||++|+++ +++.+||.||.++++++|++|.+ .|+++|++|+++++|++++++++
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~-----------------~g~~~~~~v~i~~~~~~~~~~~~ 64 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRR-----------------RGCVDGERLAVLARNSVWLVALH 64 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHHHHHHH
Confidence 456788999999987 67899999999999999999998 49999999999999999999999
Q ss_pred HHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhhhhcc
Q 013869 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMD 165 (435)
Q Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (435)
|||+++|++++|+++..+.+++.+++++++++++++++...... .....+ ...... . .........
T Consensus 65 la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--------~~~~~~---~~~~~~--~-~~~~~~~~~ 130 (488)
T PRK09088 65 FACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDDAVAAGR--------TDVEDL---AAFIAS--A-DALEPADTP 130 (488)
T ss_pred HHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcchhhccc--------ccccch---hhhhhh--c-cccccccCC
Confidence 99999999999999999999999999999999999987543210 000000 000000 0 000001112
Q ss_pred CCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC
Q 013869 166 GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK 245 (435)
Q Consensus 166 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~ 245 (435)
....+++++++|||||||.||++.++|+++...+............+++++.+|++|..++...++.++..|+++++.+.
T Consensus 131 ~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~ 210 (488)
T PRK09088 131 SIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNG 210 (488)
T ss_pred CCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCC
Confidence 34568999999999999999999999999988888877777788999999999999999988778889999999999998
Q ss_pred cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHH
Q 013869 246 FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWET 325 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~ 325 (435)
+++...+..+.+ .++++|++..+|.++..+.+... .....++++|.+++||++++.+..+.+.+
T Consensus 211 ~~~~~~~~~~~~--------~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~l~~~~~gG~~~~~~~~~~~~~ 274 (488)
T PRK09088 211 FEPKRTLGRLGD--------PALGITHYFCVPQMAQAFRAQPG--------FDAAALRHLTALFTGGAPHAAEDILGWLD 274 (488)
T ss_pred CCHHHHHHHHHh--------hccCCcEEeeHHHHHHHHHhCcC--------cCccccccceEEEecCCCCCHHHHHHHHH
Confidence 888888777532 24899999999999998876422 12234678999999999999999888886
Q ss_pred HhCCcccccccCccccchhccCCC---CCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccccCCchhc
Q 013869 326 ITGHRLLERYGMTEFVMAISNPLR---GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVT 401 (435)
Q Consensus 326 ~~~~~l~~~YG~tE~~~~~~~~~~---~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~ 401 (435)
. ++++++.||+||++.+...... ...+.+++|.|.++++++|+|+++...+.+ .|||+++|+.++.||+++++.+
T Consensus 275 ~-g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~ 353 (488)
T PRK09088 275 D-GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVPGELLLRGPNLSPGYWRRPQAT 353 (488)
T ss_pred h-CCceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCCCceEEEEECCccchhhcCChhhh
Confidence 5 8999999999999865432111 123567899999999999999888877666 7999999999999999999999
Q ss_pred ccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 402 KDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 402 ~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+..++.+|||+|||+|+++++|.+++.||.+|+|
T Consensus 354 ~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i 387 (488)
T PRK09088 354 ARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMF 387 (488)
T ss_pred hhhhcCCCCeeecceEEEcCCCcEEEeccccceE
Confidence 9888889999999999999999999999999986
No 64
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-53 Score=434.75 Aligned_cols=399 Identities=20% Similarity=0.277 Sum_probs=312.1
Q ss_pred HHHHHHhcccCCCeeEEEe------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCC
Q 013869 4 FKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (435)
Q Consensus 4 ~~~~~~~~~~~p~~~al~~------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~ 77 (435)
+++|.++++.+|+++|++. ..+.+||+||.++++++|++|++ .|+++||+|+++++|
T Consensus 56 ~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~n 118 (629)
T PRK10524 56 HNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRS-----------------LGVQRGDRVLIYMPM 118 (629)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCC
Confidence 5678888888999999996 23689999999999999999999 499999999999999
Q ss_pred CHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhh---------HHHHHHHHhcc---CCccccCCC
Q 013869 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKS---GAKFSLIPP 145 (435)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~---~~~~~~~~~ 145 (435)
+++++++++||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+..+.... ...+..+..
T Consensus 119 ~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~ 198 (629)
T PRK10524 119 IAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDR 198 (629)
T ss_pred CHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999997642 23333332221 111221111
Q ss_pred CC-CCCC----cccccc---c-h-hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHH-HHHHhccCCCCCee
Q 013869 146 VP-NVSS----ETTVFD---Q-S-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQ-MLTEAWEYTSADQF 214 (435)
Q Consensus 146 ~~-~~~~----~~~~~~---~-~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~-~~~~~~~~~~~~~~ 214 (435)
.. .... .....+ . . ...+.....++++++++|||||||.||+|.++|.+++.... .....+++.+++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~ 278 (629)
T PRK10524 199 GLAPMARVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETF 278 (629)
T ss_pred CCCCcCcccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEE
Confidence 00 0000 000000 0 0 00011124578999999999999999999999998754443 34445678899999
Q ss_pred EEeecchhhhHHHHHHHHHHHcCCEEEEcCC----cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccc
Q 013869 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (435)
Q Consensus 215 l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 290 (435)
++..|++|..+....++.++..|+++++.+. .++..+++. ++++++|++.++|++++.+.+....
T Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~- 347 (629)
T PRK10524 279 FCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRI----------VEKYKVNRMFSAPTAIRVLKKQDPA- 347 (629)
T ss_pred EEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHH----------HHHcCceEEEeCHHHHHHHHhcCcc-
Confidence 9999999998876679999999999998763 356667776 6679999999999999988764211
Q ss_pred cHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCC----CCCCCCccceecCCCeE
Q 013869 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR----GARKAGTVGNPLPGVQV 366 (435)
Q Consensus 291 ~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~----~~~~~~~~G~p~~~~~~ 366 (435)
.....+++++|.+++||+++++++.+.+.+.++.++++.||+||++..+..... .....+++|+|++|+++
T Consensus 348 -----~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~ 422 (629)
T PRK10524 348 -----LLRKHDLSSLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNV 422 (629)
T ss_pred -----cccccChhheeEEEEeCCCCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceE
Confidence 112346789999999999999999999999999999999999999843322111 12346789999999999
Q ss_pred EEecC-CCCCCCCc-cceEEEecC---CccccccCCchhcccccc---cCCccccCceEEEcCCccEEEecccccCC
Q 013869 367 KIAED-ESGSDAAG-VGEICVKSP---SLFKEYWKLPKVTKDSFT---ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 367 ~i~d~-~~~~~~~~-~Gel~v~~~---~~~~gy~~~~~~~~~~~~---~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+|+|+ +++.++.+ .|||+++|| ..+.||+++++.+.+.+. .++||+|||+|++|+||++++.||.||+|
T Consensus 423 ~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i 499 (629)
T PRK10524 423 KLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVI 499 (629)
T ss_pred EEEeCCCCCCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeE
Confidence 99998 88877666 799999998 578899999877665542 36899999999999999999999999986
No 65
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.3e-53 Score=463.55 Aligned_cols=398 Identities=26% Similarity=0.401 Sum_probs=326.3
Q ss_pred hHHHHHHHhcccCCCeeEEEe-CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~-~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
++.+.|.++++++|+++|+++ .++++||+||.++++++|++|.+ ++++||+|+++++|+++
T Consensus 616 ~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~------------------~~~~g~~V~i~~~n~~~ 677 (1146)
T PRK08633 616 PLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR------------------ELKDEENVGILLPPSVA 677 (1146)
T ss_pred CHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH------------------hCCCCCeEEEECCCchH
Confidence 577889999999999999997 46899999999999999999987 57999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHh--ccC--CccccCCCCC-CCCCcccc
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS--KSG--AKFSLIPPVP-NVSSETTV 155 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~--~~~~~~~~~~-~~~~~~~~ 155 (435)
++++++||+++|++++|+++..+.+++.++++++++++++++++..+.+..... ... ..+....... ........
T Consensus 678 ~~~~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (1146)
T PRK08633 678 GALANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKL 757 (1146)
T ss_pred HHHHHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHH
Confidence 999999999999999999999999999999999999999999887766542110 011 1111111100 00000000
Q ss_pred cc-------chh-hhh--ccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhH
Q 013869 156 FD-------QSQ-AEK--MDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHG 225 (435)
Q Consensus 156 ~~-------~~~-~~~--~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g 225 (435)
.. +.. ... .....++++++++|||||||.||+|.++|+++..+.......++..++|++++.+|++|..+
T Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g 837 (1146)
T PRK08633 758 TALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFG 837 (1146)
T ss_pred HHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHh
Confidence 00 000 000 13456799999999999999999999999999999988888889999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEcC-CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccc
Q 013869 226 LFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQ 304 (435)
Q Consensus 226 ~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~ 304 (435)
+...++.++..|+++++.+ .+++...++. ++++++|++.++|++++.+.+... ....++++
T Consensus 838 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~ 899 (1146)
T PRK08633 838 LTVTLWLPLLEGIKVVYHPDPTDALGIAKL----------VAKHRATILLGTPTFLRLYLRNKK--------LHPLMFAS 899 (1146)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCHHHHHHH----------HHHcCCeEEEecHHHHHHHHhccc--------cCcccCCC
Confidence 9877899999999998876 4677888777 666999999999999999887422 22346789
Q ss_pred cEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCC----------CCCCCCccceecCCCeEEEecC-CC
Q 013869 305 LRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR----------GARKAGTVGNPLPGVQVKIAED-ES 373 (435)
Q Consensus 305 lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~----------~~~~~~~~G~p~~~~~~~i~d~-~~ 373 (435)
+|.+++||+++++++.+.|++.++.++++.||+||++.+++.... ...+..++|+|.||++++|+|+ ++
T Consensus 900 lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~ 979 (1146)
T PRK08633 900 LRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETF 979 (1146)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHhCCCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCC
Confidence 999999999999999999999999999999999999865542211 1134678999999999999995 46
Q ss_pred CCCCCc-cceEEEecCCccccccCCchhccccccc---CCccccCceEEEcCCccEEEecccccCC
Q 013869 374 GSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTA---DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 374 ~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~---~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+.++.+ .|||+++|+.++.||+++++.+++.+.+ +|||+|||+|++|+||++++.||.||+|
T Consensus 980 ~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i 1045 (1146)
T PRK08633 980 EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFA 1045 (1146)
T ss_pred ccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchh
Confidence 666666 7999999999999999999999888743 3899999999999999999999999986
No 66
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=7.1e-54 Score=471.88 Aligned_cols=395 Identities=18% Similarity=0.234 Sum_probs=315.0
Q ss_pred hHHHHHHHhcccCCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 013869 2 EVFKAAYKKGSMARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (435)
++++.|.++++++|+++|++. .++++||+||.++++++|++|.+. |+++|++|+
T Consensus 237 ~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-----------------gv~~g~~V~ 299 (1389)
T TIGR03443 237 AIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKT-----------------GIKRGDVVM 299 (1389)
T ss_pred cHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEE
Confidence 478899999999999999985 357899999999999999999994 999999999
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhH---HHHHHHHhccCC---cc--ccCC
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR---EVLQNVASKSGA---KF--SLIP 144 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---~~~~~~~~~~~~---~~--~~~~ 144 (435)
|+++|++++++++|||+++|++++|++|.++.+++.++++.+++++++++.+.. ..+......... .+ ..+.
T Consensus 300 i~~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (1389)
T TIGR03443 300 IYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQ 379 (1389)
T ss_pred EEecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEec
Confidence 999999999999999999999999999999999999999999999999876421 111111111000 00 0000
Q ss_pred CCCCC-----CCc-cccccc----hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCee
Q 013869 145 PVPNV-----SSE-TTVFDQ----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQF 214 (435)
Q Consensus 145 ~~~~~-----~~~-~~~~~~----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~ 214 (435)
..... ... ...... ..........++++++++|||||||.||||.++|+++.+.+.+....+++.+.+++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~ 459 (1389)
T TIGR03443 380 DDGSLVGGSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKF 459 (1389)
T ss_pred ccccccccccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEE
Confidence 00000 000 000000 00011123467899999999999999999999999999999988888999999999
Q ss_pred EEeecchhhhHHHHHHHHHHHcCCEEEEcCCc---chhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhcccc
Q 013869 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPKF---SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMD 291 (435)
Q Consensus 215 l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 291 (435)
+...|++|..++. .++.+|..|+++++++.. ++..+++. +.++++|++.++|+++..+...
T Consensus 460 ~~~~~~~~d~~~~-~i~~~L~~G~~l~~~~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~~~~l~~~----- 523 (1389)
T TIGR03443 460 TMLSGIAHDPIQR-DMFTPLFLGAQLLVPTADDIGTPGRLAEW----------MAKYGATVTHLTPAMGQLLSAQ----- 523 (1389)
T ss_pred EEecCceecchHH-HHHHHHhCCCEEEEcChhhccCHHHHHHH----------HHHhCCeEEEeCHHHHHHHHhc-----
Confidence 9999999998875 699999999999998764 34556665 6679999999999999988643
Q ss_pred HHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHh-CCcccccccCccccchhccCC--CC---------CCCCCccce
Q 013869 292 TELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL--RG---------ARKAGTVGN 359 (435)
Q Consensus 292 ~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~--~~---------~~~~~~~G~ 359 (435)
....++++|.+++||+++++.+.+++.+.+ +.++++.||+||++..++... .. .....++|+
T Consensus 524 ------~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 597 (1389)
T TIGR03443 524 ------ATTPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGK 597 (1389)
T ss_pred ------ccccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCC
Confidence 123478899999999999999999998876 789999999999976544211 00 113467899
Q ss_pred ecCCCeEEEecCCC--CCCCCc-cceEEEecCCccccccCCchhcccccc----------------------------cC
Q 013869 360 PLPGVQVKIAEDES--GSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFT----------------------------AD 408 (435)
Q Consensus 360 p~~~~~~~i~d~~~--~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~----------------------------~~ 408 (435)
|+++++++|+|+++ ..++.+ .|||+|+|++++.||+++|+.|.+.|. .+
T Consensus 598 ~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (1389)
T TIGR03443 598 GMKNVQLLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRD 677 (1389)
T ss_pred ccCCCEEEEECCccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCcc
Confidence 99999999999654 445555 799999999999999999999998873 25
Q ss_pred CccccCceEEEcCCccEEEecccccCC
Q 013869 409 GFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 409 g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+||+|||+|++++||+|+|+||.||+|
T Consensus 678 ~~y~TGDlg~~~~dG~l~~~GR~dd~I 704 (1389)
T TIGR03443 678 RLYRTGDLGRYLPDGNVECCGRADDQV 704 (1389)
T ss_pred ceeecCCceeEcCCCCEEEecccCCEE
Confidence 799999999999999999999999986
No 67
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-53 Score=416.85 Aligned_cols=364 Identities=35% Similarity=0.576 Sum_probs=309.8
Q ss_pred cccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHH
Q 013869 11 GSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWF 90 (435)
Q Consensus 11 ~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 90 (435)
+...++++|++.+++++||+||.++++++|..|++ +|+|+++++|++++++++|||++
T Consensus 10 ~~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~----------------------~~~V~l~~~~~~~~~~~~la~~~ 67 (471)
T PRK07787 10 AAAADIADAVRIGGRVLSRSDLAGAATAVAERVAG----------------------ARRVAVLATPTLATVLAVVGALI 67 (471)
T ss_pred hcccCCceEEEeCCcEEEHHHHHHHHHHHHHHhcc----------------------CCEEEEECCCCHHHHHHHHHHHh
Confidence 34568999999999999999999999999999864 69999999999999999999999
Q ss_pred hCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhhhhccCCCCC
Q 013869 91 SGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGE 170 (435)
Q Consensus 91 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (435)
+|++++|+++..+.+++.++++++++++++++++... ...+. ........ .........++
T Consensus 68 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~~------~~~~~----~~~~~~~~---------~~~~~~~~~~~ 128 (471)
T PRK07787 68 AGVPVVPVPPDSGVAERRHILADSGAQAWLGPAPDDP------AGLPH----VPVRLHAR---------SWHRYPEPDPD 128 (471)
T ss_pred cCcEEeecCCCCChHHHHHHHHhcCCCEEEecCCccc------ccccc----eeeecccc---------ccccCCCCCCC
Confidence 9999999999999999999999999999999874110 00000 00000000 00011224578
Q ss_pred CcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhH
Q 013869 171 DPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRG 250 (435)
Q Consensus 171 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~ 250 (435)
++++++|||||||.||+|.++|+++..++......+++...++++..+|++|..|+...++.++..|+++++.+.+++..
T Consensus 129 ~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~ 208 (471)
T PRK07787 129 APALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEA 208 (471)
T ss_pred ceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHH
Confidence 99999999999999999999999999998888888889999999999999999999888999999999999999999888
Q ss_pred HHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCc
Q 013869 251 IWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHR 330 (435)
Q Consensus 251 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~ 330 (435)
++.. ++ +++|++.++|+++..+++... ....++++|.++.||+++++++++.|.+.++.+
T Consensus 209 ~~~~----------i~-~~~t~~~~~P~~~~~l~~~~~---------~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~ 268 (471)
T PRK07787 209 YAQA----------LS-EGGTLYFGVPTVWSRIAADPE---------AARALRGARLLVSGSAALPVPVFDRLAALTGHR 268 (471)
T ss_pred HHHH----------Hh-hCceEEEcchHHHHHHHhCcc---------ccccccceeEEEECCCCCCHHHHHHHHHHcCCC
Confidence 8887 67 899999999999999986421 123568899999999999999999999999999
Q ss_pred ccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCC--Cc-cceEEEecCCccccccCCchhccccccc
Q 013869 331 LLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDA--AG-VGEICVKSPSLFKEYWKLPKVTKDSFTA 407 (435)
Q Consensus 331 l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~--~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 407 (435)
+++.||+||++..++........+.++|+|+++++++|+|+++...+ ++ .|||+++|+.++.||+++++.+...|.+
T Consensus 269 ~~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~ 348 (471)
T PRK07787 269 PVERYGMTETLITLSTRADGERRPGWVGLPLAGVETRLVDEDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTA 348 (471)
T ss_pred eecccCccccCcceecCCCCcccCCcccccCCCcEEEEECCCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccC
Confidence 99999999998655544333445678999999999999998887765 23 6999999999999999999999999988
Q ss_pred CCccccCceEEEcCCccEEEeccc-ccCC
Q 013869 408 DGFFKTGDTGKQDEDGYYIILGRK-GIYF 435 (435)
Q Consensus 408 ~g~~~TGD~g~~~~dG~l~~~gR~-~d~i 435 (435)
+|||+|||+|++++||++++.||+ +|++
T Consensus 349 ~~~~~TGDlg~~~~dg~l~~~GR~~d~~i 377 (471)
T PRK07787 349 DGWFRTGDVAVVDPDGMHRIVGRESTDLI 377 (471)
T ss_pred CCceecCceEEEcCCCCEEEeCCCCceeE
Confidence 999999999999999999999996 6653
No 68
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-53 Score=423.38 Aligned_cols=396 Identities=27% Similarity=0.408 Sum_probs=327.1
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
|+.++|.++++++|+++|+++.++.+||.||.+++++++..|.+. |+++|++|+++++|++++
T Consensus 13 ~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------gv~~~~~V~i~~~~~~~~ 75 (524)
T PRK06188 13 TYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEAL-----------------GLGTGDAVALLSLNRPEV 75 (524)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHHH
Confidence 688999999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechh-hHHHHHHHHhccCC--ccccCCCCCCCCCcc-cccc
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED-YREVLQNVASKSGA--KFSLIPPVPNVSSET-TVFD 157 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~ 157 (435)
+++++||+++|++++|+++..+.+++.++++.++++.+++++. ....+......... .+..+.......... ....
T Consensus 76 ~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (524)
T PRK06188 76 LMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAAAK 155 (524)
T ss_pred HHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhhhc
Confidence 9999999999999999999999999999999999999999986 33333332222211 111111110000000 0000
Q ss_pred chhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcC
Q 013869 158 QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (435)
Q Consensus 158 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G 237 (435)
...........++++++++|||||||.||+|.++|.++..........+++..+++++...|++|..++. ++.++..|
T Consensus 156 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~--~~~~l~~G 233 (524)
T PRK06188 156 FGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF--FLPTLLRG 233 (524)
T ss_pred cCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH--HHHHHHcC
Confidence 0000111123456699999999999999999999999999999888888999999999999999998863 67889999
Q ss_pred CEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCH
Q 013869 238 ATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (435)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~ 317 (435)
+++++.+.+++..+++. ++++++|++.++|+++..+++..+. ....++++|.+++||+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~l~~l~~~~~~--------~~~~l~~lr~~~~gg~~~~~ 295 (524)
T PRK06188 234 GTVIVLAKFDPAEVLRA----------IEEQRITATFLVPTMIYALLDHPDL--------RTRDLSSLETVYYGASPMSP 295 (524)
T ss_pred CEEEEcCCCCHHHHHHH----------HHHhCCEEEEehHHHHHHHHhCcCc--------cCCCCcceeEEEEcCCCCCH
Confidence 99999999999998888 5669999999999999999876332 22357899999999999999
Q ss_pred HHHHHHHHHhCCcccccccCccccchhccCCC------CCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCc
Q 013869 318 PVMQQWETITGHRLLERYGMTEFVMAISNPLR------GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSL 390 (435)
Q Consensus 318 ~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~------~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~ 390 (435)
++.+.|.+.++..+.+.||+||++..++.... ......++|+|+++++++|+|++++.++.+ .|||+++|+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~Gel~v~~~~~ 375 (524)
T PRK06188 296 VRLAEAIERFGPIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEVGEICVRGPLV 375 (524)
T ss_pred HHHHHHHHHhCchhhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCeeEEEEECcch
Confidence 99999999999999999999999755442211 123566899999999999999998887766 69999999999
Q ss_pred cccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 391 FKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 391 ~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+.||++++..+...+ .+|||+|||+|++++||+++++||.+|+|
T Consensus 376 ~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~~~i 419 (524)
T PRK06188 376 MDGYWNRPEETAEAF-RDGWLHTGDVAREDEDGFYYIVDRKKDMI 419 (524)
T ss_pred hhhhcCChHHhhhhh-cCCceeecceEEEcCCccEEEEeccccce
Confidence 999999999988887 47999999999999999999999999875
No 69
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.7e-53 Score=423.73 Aligned_cols=399 Identities=27% Similarity=0.378 Sum_probs=324.7
Q ss_pred hHHHHHHHhcccCCCeeEEEe--CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH
Q 013869 2 EVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~ 79 (435)
++.+.|.+.++++|+++|++. .++.+||+||.++++++|.+|.+ .|+++|++|+++++|++
T Consensus 19 ~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gi~~g~~V~i~~~~~~ 81 (558)
T PRK12583 19 TIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLA-----------------LGVQPGDRVGIWAPNCA 81 (558)
T ss_pred cHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCCh
Confidence 688999999999999999987 45789999999999999999998 49999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhH-----HHHHHHHhcc-------------CC--c
Q 013869 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKS-------------GA--K 139 (435)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~-------------~~--~ 139 (435)
++++++|||+++|++++|+++.++.+++.+++++++++++++++... ..+....... +. .
T Consensus 82 ~~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (558)
T PRK12583 82 EWLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRG 161 (558)
T ss_pred HHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceE
Confidence 99999999999999999999999999999999999999999986432 2222211110 00 0
Q ss_pred cccCCCCC--CCCCcccc---ccc----hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCC
Q 013869 140 FSLIPPVP--NVSSETTV---FDQ----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTS 210 (435)
Q Consensus 140 ~~~~~~~~--~~~~~~~~---~~~----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~ 210 (435)
........ ........ ... ..........++++++++|||||||.||+|.++|+++.+++......+++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 241 (558)
T PRK12583 162 VVSLAPAPPPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTE 241 (558)
T ss_pred EEEecCCCCccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCC
Confidence 00000000 00000000 000 0001112345788999999999999999999999999999888888889999
Q ss_pred CCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC-CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhcc
Q 013869 211 ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA 289 (435)
Q Consensus 211 ~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 289 (435)
+++++...|++|..|....++.++..|++++++. .+++..++.. ++++++|++.++|+++..+++...
T Consensus 242 ~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~----------i~~~~~t~l~~~P~~~~~l~~~~~- 310 (558)
T PRK12583 242 HDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQA----------VEEERCTALYGVPTMFIAELDHPQ- 310 (558)
T ss_pred CCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHH----------HHHcCCeEEeccHHHHHHHHcccc-
Confidence 9999999999999999888999999999999754 5677777777 666999999999999988876422
Q ss_pred ccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCC-cccccccCccccchhccCCC---CCCCCCccceecCCCe
Q 013869 290 MDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLR---GARKAGTVGNPLPGVQ 365 (435)
Q Consensus 290 ~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~-~l~~~YG~tE~~~~~~~~~~---~~~~~~~~G~p~~~~~ 365 (435)
....+++++|.+++||+++++++.+.+.+.++. .+.+.||+||++.+++.... ......++|+|.+++.
T Consensus 311 -------~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~ 383 (558)
T PRK12583 311 -------RGNFDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLE 383 (558)
T ss_pred -------ccCCCchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCe
Confidence 122357899999999999999999999998864 79999999999876653322 1234678999999999
Q ss_pred EEEecCCCCCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 366 VKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 366 ~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++|+|+++..++.+ .|||+++|+.++.||+++++.+...|+.++||+|||+|++++||++++.||.+|+|
T Consensus 384 ~~i~d~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i 454 (558)
T PRK12583 384 VKVVDPDGATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMI 454 (558)
T ss_pred EEEECCCCCCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEeccccee
Confidence 99999888777666 79999999999999999999998888778999999999999999999999999985
No 70
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-53 Score=423.05 Aligned_cols=397 Identities=22% Similarity=0.355 Sum_probs=319.4
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
||+.+.|.++++++|+++|++..++++||+||.++++++|..|.+. |+++|++|+++++|+++
T Consensus 7 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~-----------------g~~~g~~v~i~~~~~~~ 69 (528)
T PRK07470 7 MNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAAR-----------------GVRKGDRILVHSRNCNQ 69 (528)
T ss_pred CCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEcCCCHH
Confidence 6788999999999999999999999999999999999999999994 99999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC--ccccCCCCCCCCCccccccc
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPNVSSETTVFDQ 158 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 158 (435)
++++++||+++|++++++++.++.+++.++++.++++.++++++..+.+......... .+..+...............
T Consensus 70 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (528)
T PRK07470 70 MFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVAR 149 (528)
T ss_pred HHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhc
Confidence 9999999999999999999999999999999999999999999876655544322111 11111110000000000000
Q ss_pred --hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc--cCCCCCeeEEeecchhhhHHHHHHHHHH
Q 013869 159 --SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW--EYTSADQFLHCLPLHHVHGLFNALLAPL 234 (435)
Q Consensus 159 --~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~l~~~pl~~~~g~~~~~~~~l 234 (435)
...........+++++++|||||||.||+|.++|+++...+....... +....++++..+|++|..++. .++ .+
T Consensus 150 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~-~~ 227 (528)
T PRK07470 150 HLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIH-QLC-QV 227 (528)
T ss_pred CCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHH-HHH-HH
Confidence 000112245678999999999999999999999999876554433322 467789999999999999875 344 57
Q ss_pred HcCCEEEEcC--CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecC
Q 013869 235 YAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (435)
Q Consensus 235 ~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G 312 (435)
..|+++++.+ .+++..+++. ++++++|++.++|++++.+.+..+. ....++++|.+++||
T Consensus 228 ~~g~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~--------~~~~~~~lr~~~~gG 289 (528)
T PRK07470 228 ARGAATVLLPSERFDPAEVWAL----------VERHRVTNLFTVPTILKMLVEHPAV--------DRYDHSSLRYVIYAG 289 (528)
T ss_pred hcCceEEEecccCcCHHHHHHH----------HHhcCCeEEechHHHHHHHHhCcCc--------CCCCCcceEEEEEcC
Confidence 7787777665 4677787777 6679999999999999999875321 223578999999999
Q ss_pred CCCCHHHHHHHHHHhCCcccccccCccccchhccCCC--------CCCCCCccceecCCCeEEEecCCCCCCCCc-cceE
Q 013869 313 SALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR--------GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEI 383 (435)
Q Consensus 313 ~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~--------~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel 383 (435)
+++++.+.+.+.+.++.++++.||+||+++.++.... .....+++|+|.++++++++|++++.++.+ .|||
T Consensus 290 ~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~Gel 369 (528)
T PRK07470 290 APMYRADQKRALAKLGKVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGETGEI 369 (528)
T ss_pred CCCCHHHHHHHHHHhCcHHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCceEE
Confidence 9999999999999999999999999998765542211 122456889999999999999988887766 6999
Q ss_pred EEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 384 CVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 384 ~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+++|+.++.||+++++.+...|. +|||+|||+|++++||+++++||.||+|
T Consensus 370 ~i~~~~~~~gy~~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~~~GR~dd~i 420 (528)
T PRK07470 370 CVIGPAVFAGYYNNPEANAKAFR-DGWFRTGDLGHLDARGFLYITGRASDMY 420 (528)
T ss_pred EEeCCccchhhcCCHHHHHhhhc-CCcEecceeEEEccCCeEEEeCCccceE
Confidence 99999999999999999888774 7999999999999999999999999975
No 71
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.7e-53 Score=425.11 Aligned_cols=399 Identities=26% Similarity=0.403 Sum_probs=321.4
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.+.|.++++++|+++|+++.+..+||.||+++++++|.+|.+. |+++||+|+++++|++++
T Consensus 24 ~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~-----------------gi~~gd~V~i~~~n~~~~ 86 (557)
T PRK07059 24 SLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSR-----------------GLAKGARVAIMMPNVLQY 86 (557)
T ss_pred CHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCCHHH
Confidence 688999999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCC-------------
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN------------- 148 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 148 (435)
+++++||+++|++++|+++..+.+++.++++.++++++++++.....+.............+.....
T Consensus 87 ~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (557)
T PRK07059 87 PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVV 166 (557)
T ss_pred HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEeccccccccccccccccc
Confidence 9999999999999999999999999999999999999999988776655543322111100000000
Q ss_pred -----------CCCccccc-----cchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhcc----C
Q 013869 149 -----------VSSETTVF-----DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE----Y 208 (435)
Q Consensus 149 -----------~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~----~ 208 (435)
........ ............++++++++|||||||.||+|.++|.+++.++........ .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~ 246 (557)
T PRK07059 167 RRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEK 246 (557)
T ss_pred ccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccc
Confidence 00000000 000011123456789999999999999999999999998876554332221 1
Q ss_pred C---CCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC-cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHH
Q 013869 209 T---SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLI 284 (435)
Q Consensus 209 ~---~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 284 (435)
. ....++..+|++|.+++....+.++..|++.++.+. .++..+++. ++++++|.+.++|.++..++
T Consensus 247 ~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~l~ 316 (557)
T PRK07059 247 KPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKE----------LKKYQVHIFPAVNTLYNALL 316 (557)
T ss_pred cCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHH----------HHHhCCeeeecCHHHHHHHH
Confidence 1 234678889999998876677788889988777664 466666666 66799999999999999998
Q ss_pred hhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCC-CCCCCCccceecCC
Q 013869 285 QGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPG 363 (435)
Q Consensus 285 ~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~~~G~p~~~ 363 (435)
+.... ...+++++|.++.||++++..+.++|.+.+++++++.||+||++.+++.... ......++|.|+++
T Consensus 317 ~~~~~--------~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g 388 (557)
T PRK07059 317 NNPDF--------DKLDFSKLIVANGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPS 388 (557)
T ss_pred cCcCc--------CcCCchhheEEEeccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCCCCCcCCcccCccCC
Confidence 75321 2235678999999999999999999999999999999999999876553322 23346789999999
Q ss_pred CeEEEecCCCCCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 364 VQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 364 ~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++++++|+++..++.+ .|||+++|+.++.||+++++.+...|..+|||+|||+|++++||++++.||++|+|
T Consensus 389 ~~v~i~d~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i 461 (557)
T PRK07059 389 TEVSIRDDDGNDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMI 461 (557)
T ss_pred cEEEEECCCCCCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccce
Confidence 9999999988887766 69999999999999999999999888889999999999999999999999999975
No 72
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=7.1e-53 Score=424.52 Aligned_cols=394 Identities=20% Similarity=0.285 Sum_probs=305.5
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
|+.+.|.++++.+|+++|++..+.++||+||.++++++|..|.+ +|+++||+|+|+++|++++
T Consensus 15 ~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~-----------------~Gl~~gd~Vai~~~n~~e~ 77 (579)
T PLN03102 15 TPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLIS-----------------LNITKNDVVSVLAPNTPAM 77 (579)
T ss_pred cHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCcHHH
Confidence 56788999999999999999999999999999999999999999 4999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccC-------CccccCCCCCCCCCc--
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-------AKFSLIPPVPNVSSE-- 152 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-- 152 (435)
++++|||+++|++++|+++.++.+++.++++.++++++|++++..+.+........ ..+..+.........
T Consensus 78 ~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (579)
T PLN03102 78 YEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSS 157 (579)
T ss_pred HHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcc
Confidence 99999999999999999999999999999999999999999888776665433221 111111111100000
Q ss_pred --cccccc---h-hh-----hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecch
Q 013869 153 --TTVFDQ---S-QA-----EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLH 221 (435)
Q Consensus 153 --~~~~~~---~-~~-----~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~ 221 (435)
....+. . .. .......++++++++|||||||.||+|.++|+++............+...++++..+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 237 (579)
T PLN03102 158 EELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMF 237 (579)
T ss_pred cccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChh
Confidence 000000 0 00 001123568999999999999999999999999765544444445667778899999999
Q ss_pred hhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhh
Q 013869 222 HVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASA 301 (435)
Q Consensus 222 ~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 301 (435)
|..++.. .+.++..|+++++.+.+++..+++. |+++++|++.++|+++..|++..+. ....
T Consensus 238 h~~g~~~-~~~~~~~g~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~--------~~~~ 298 (579)
T PLN03102 238 HCNGWTF-TWGTAARGGTSVCMRHVTAPEIYKN----------IEMHNVTHMCCVPTVFNILLKGNSL--------DLSP 298 (579)
T ss_pred hhcchhH-HHHHHHhcCcEEeeccCChHHHHHH----------HHHcCCeEEEeChHHHHHHHhCccc--------ccCC
Confidence 9999864 6778899999999988888888887 6679999999999999999875321 1123
Q ss_pred ccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccC-CCC-------------CCCCCccceecCCCeEE
Q 013869 302 AKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRG-------------ARKAGTVGNPLPGVQVK 367 (435)
Q Consensus 302 l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~-~~~-------------~~~~~~~G~p~~~~~~~ 367 (435)
.++++.+++||++++..+.+.+.+ ++.++++.||+||+++.++.. ... ....+..+.+++++ .
T Consensus 299 ~~~~~~~~~gg~~~~~~~~~~~~~-~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v--~ 375 (579)
T PLN03102 299 RSGPVHVLTGGSPPPAALVKKVQR-LGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLADV--D 375 (579)
T ss_pred cccceEEEECCCCCCHHHHHHHHH-cCCeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccce--E
Confidence 456788999999999999998876 589999999999987543321 100 01123334445444 4
Q ss_pred EecCC-CCCCC--Cc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 368 IAEDE-SGSDA--AG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 368 i~d~~-~~~~~--~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+.|++ +..++ ++ .|||+++|+.++.||+++++.+.+.|. +|||+|||+|++|+||++++.||.+|+|
T Consensus 376 i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~-~gw~~TGDlg~~d~dG~l~i~GR~~d~i 446 (579)
T PLN03102 376 VKNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAFK-HGWLNTGDVGVIHPDGHVEIKDRSKDII 446 (579)
T ss_pred EeccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhhc-cCceecCceEEEcCCCeEEEEeccCcEE
Confidence 45533 33333 22 699999999999999999999998885 7999999999999999999999999975
No 73
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-52 Score=421.37 Aligned_cols=397 Identities=21% Similarity=0.299 Sum_probs=318.0
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+++.+.|.++++.+|+++|++.+++++||+||+++++++|+.|.+ .|+++||+|+++++|+++
T Consensus 10 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~-----------------~g~~~g~~V~i~~~n~~~ 72 (540)
T PRK06164 10 DTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAA-----------------QGVRRGDRVAVWLPNCIE 72 (540)
T ss_pred CCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCCcHH
Confidence 478999999999999999999999999999999999999999998 499999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhH-----HHHHHHHhccC---CccccCC-CCCCCCC
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSG---AKFSLIP-PVPNVSS 151 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~---~~~~~~~-~~~~~~~ 151 (435)
++++++||+++|++++|+++..+.+++.++++.++++.++++++.. +.+........ ..+..+. .......
T Consensus 73 ~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (540)
T PRK06164 73 WVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPA 152 (540)
T ss_pred HHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCC
Confidence 9999999999999999999999999999999999999999987642 22222111100 0111111 0000000
Q ss_pred cc-----c-cccchh----hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecch
Q 013869 152 ET-----T-VFDQSQ----AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLH 221 (435)
Q Consensus 152 ~~-----~-~~~~~~----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~ 221 (435)
.. . ...... .........+++++++|||||||.||+|.++|+++...+......+++.++++++..+|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~ 232 (540)
T PRK06164 153 PAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFC 232 (540)
T ss_pred CCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCch
Confidence 00 0 000000 0001234568999999999999999999999999999999888889999999999999999
Q ss_pred hhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhh
Q 013869 222 HVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASA 301 (435)
Q Consensus 222 ~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 301 (435)
|..|+. .++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+. ......
T Consensus 233 ~~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~l~~l~~~---------~~~~~~ 292 (540)
T PRK06164 233 GVFGFS-TLLGALAGGAPLVCEPVFDAARTARA----------LRRHRVTHTFGNDEMLRRILDT---------AGERAD 292 (540)
T ss_pred hHHHHH-HHHHHHhcCceEEecCCCCHHHHHHH----------HHHhCCeeecCCHHHHHHHHHh---------hcccCC
Confidence 999986 69999999999999999998888888 5669999999999999999875 122346
Q ss_pred ccccEEEEecC-CCCCHHHHHHHHHHhCCcccccccCccccchhccCCCC---CCCCCccceec-CCCeEEEecC-CCCC
Q 013869 302 AKQLRLMMCGS-SALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG---ARKAGTVGNPL-PGVQVKIAED-ESGS 375 (435)
Q Consensus 302 l~~lr~i~~~G-~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~---~~~~~~~G~p~-~~~~~~i~d~-~~~~ 375 (435)
++++|.+.++| .+...++.+.+.+. ++++++.||+||++.+++..... .....+.|.|. ++++++|+|+ ++..
T Consensus 293 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~ 371 (540)
T PRK06164 293 FPSARLFGFASFAPALGELAALARAR-GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGAL 371 (540)
T ss_pred CcceeeeeeccCCcchHHHHHHHhhc-CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcC
Confidence 78899887766 44555666665554 88999999999998655432211 12334567775 8999999994 4555
Q ss_pred CCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 376 DAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 376 ~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
.+.+ .||||++|++++.||+++++.+...|+.+|||+|||+|++++||++++.||.+|+|
T Consensus 372 ~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i 432 (540)
T PRK06164 372 LPDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSL 432 (540)
T ss_pred CCCCCeeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeE
Confidence 6655 79999999999999999999999999889999999999999999999999999975
No 74
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-52 Score=418.27 Aligned_cols=384 Identities=22% Similarity=0.303 Sum_probs=314.0
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+++.+.|.+++..+|+++|++++++.+||+||+++++++|.+|.+. |+++||+|+++++|+++
T Consensus 35 ~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~-----------------gi~~g~~V~i~~~~~~~ 97 (516)
T PRK13383 35 TNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRD-----------------GVAPGRAVGVMCRNGRG 97 (516)
T ss_pred CcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhc-----------------CCCCCCEEEEECCCCHH
Confidence 4688899999999999999999999999999999999999999984 99999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchh
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
+++++|||+.+|++++|+++.++.+++.++++.++++.+++++++...+...... +..+... .. .....
T Consensus 98 ~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~----~~~~~~~-~~-----~~~~~- 166 (516)
T PRK13383 98 FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDA----VAVIDPA-TA-----GAEES- 166 (516)
T ss_pred HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcc----eEEeccc-hh-----hhhcC-
Confidence 9999999999999999999999999999999999999999998877665443211 1111100 00 00000
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHH--HHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCC
Q 013869 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSID--AQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGA 238 (435)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~--~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~ 238 (435)
...+...++.++++|||||||.||+|.++|.... ..........++..+++++..+|++|.+++. .++.++..|+
T Consensus 167 --~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~-~~~~~l~~G~ 243 (516)
T PRK13383 167 --GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLG-MLMLTIALGG 243 (516)
T ss_pred --CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHH-HHHHHHhcCC
Confidence 0011234567899999999999999999987432 1222233455788899999999999999986 4788999999
Q ss_pred EEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHH
Q 013869 239 TVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (435)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~ 318 (435)
++++...+++..+++. ++++++|.+.++|+++..+.+..+... ....++++|.+++||++++++
T Consensus 244 ~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~~------~~~~~~~lr~i~~gG~~l~~~ 307 (516)
T PRK13383 244 TVLTHRHFDAEAALAQ----------ASLHRADAFTAVPVVLARILELPPRVR------ARNPLPQLRVVMSSGDRLDPT 307 (516)
T ss_pred EEEECCCCCHHHHHHH----------HHHhCCcEEEecHHHHHHHHhcccccc------ccCCCCceEEEEECCCCCCHH
Confidence 9999999999888888 566899999999999999986533211 112468899999999999999
Q ss_pred HHHHHHHHhCCcccccccCccccchhccCC-CCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccccC
Q 013869 319 VMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWK 396 (435)
Q Consensus 319 l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~ 396 (435)
+++.|.+.++.++++.||+||++..+.... .......++|+|+++++++|+|++++..+.+ .|||+++|+.++.||++
T Consensus 308 ~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~~Y~~ 387 (516)
T PRK13383 308 LGQRFMDTYGDILYNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILDRNNRPVGPRVTGRIFVGGELAGTRYTD 387 (516)
T ss_pred HHHHHHHHcCchhhhcccccccccceeccccccccCCCcccCCCCCcEEEEECCCCCCCCCCCceEEEEecCcccccccC
Confidence 999999999999999999999986554322 2234467899999999999999888877666 79999999999999998
Q ss_pred CchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 397 LPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 397 ~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++.. .+ .+|||+|||+|++|++|++++.||.+|+|
T Consensus 388 ~~~~---~~-~~g~~~TGDl~~~d~~G~l~i~GR~~~~i 422 (516)
T PRK13383 388 GGGK---AV-VDGMTSTGDMGYLDNAGRLFIVGREDDMI 422 (516)
T ss_pred Cchh---he-ecCceecceeEEEcCCccEEEeccccceE
Confidence 7532 22 47999999999999999999999999985
No 75
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=7.7e-53 Score=423.99 Aligned_cols=400 Identities=25% Similarity=0.393 Sum_probs=321.9
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.+.|.++++++|+++|++..++++||+||.++++++|+.|.+. .|+++|++|+++++|++++
T Consensus 26 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~----------------~g~~~g~~V~i~~~~~~~~ 89 (560)
T PRK08751 26 TVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGE----------------LQLKKGDRVALMMPNCLQY 89 (560)
T ss_pred cHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHH----------------hCCCCCCEEEEECCCCHHH
Confidence 577899999999999999999999999999999999999999732 4999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCC---------------
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPV--------------- 146 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 146 (435)
++++|||+++|++++|++|.++.+++.+++++++++++++++.....+.......+.........
T Consensus 90 ~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (560)
T PRK08751 90 PIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFV 169 (560)
T ss_pred HHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhh
Confidence 99999999999999999999999999999999999999999887766655443322111110000
Q ss_pred --------CCC--CCcccccc-----chhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhcc----
Q 013869 147 --------PNV--SSETTVFD-----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---- 207 (435)
Q Consensus 147 --------~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~---- 207 (435)
... .......+ ...........++++++++|||||||.||+|.++|.++...+......+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 249 (560)
T PRK08751 170 VKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGK 249 (560)
T ss_pred hhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccc
Confidence 000 00000000 00001122346789999999999999999999999999887776655543
Q ss_pred CCCC-CeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC-CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHh
Q 013869 208 YTSA-DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQ 285 (435)
Q Consensus 208 ~~~~-~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 285 (435)
+.++ ++++...|++|..++....+.++..|++.++.. .+++..++.. +.++++|++.++|.++..+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~ 319 (560)
T PRK08751 250 LEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKE----------LKKTRFTAFTGVNTLFNGLLN 319 (560)
T ss_pred cCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHH----------HHhcceeEecChHHHHHHHHc
Confidence 3333 567788999999988666667777777766654 5677777777 677999999999999999987
Q ss_pred hhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCC-CCCCCCCccceecCCC
Q 013869 286 GYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGV 364 (435)
Q Consensus 286 ~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~~~~~~~~~G~p~~~~ 364 (435)
.... ...+++++|.+++||++++..+.+.|++.++.++++.||+||++..++... ......+++|.|.+++
T Consensus 320 ~~~~--------~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~ 391 (560)
T PRK08751 320 TPGF--------DQIDFSSLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPST 391 (560)
T ss_pred CcCc--------CCcchhhheeeeeCCCCCCHHHHHHHHHHhCCeEEEeeccccCCCceecccccccccCCCcCccCCCc
Confidence 4221 223567899999999999999999999999999999999999986655322 2234567899999999
Q ss_pred eEEEecCCCCCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 365 QVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 365 ~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+++++|+++..++.+ .|||+++|+.++.||+++++.+...|+.+|||+|||+|+++++|+++++||.+|+|
T Consensus 392 ~v~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i 463 (560)
T PRK08751 392 DACIKDDAGTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMI 463 (560)
T ss_pred eEEEECCCCCCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhhe
Confidence 999999988887666 79999999999999999999999888888999999999999999999999999986
No 76
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=5.8e-53 Score=420.96 Aligned_cols=381 Identities=22% Similarity=0.340 Sum_probs=294.5
Q ss_pred Ch-HHHHHHHhcccCCCeeEEEeCC----cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEe
Q 013869 1 ME-VFKAAYKKGSMARDSVAIRADQ----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (435)
Q Consensus 1 ~~-i~~~~~~~~~~~p~~~al~~~~----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~ 75 (435)
|| +.++|.++++++|+++|+++.+ +++||+||.++++++|++|.+ . ++||+|+|++
T Consensus 1 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~-----------------~--~~g~~V~l~~ 61 (525)
T PRK05851 1 MNELAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLD-----------------R--DRPGAVGLVG 61 (525)
T ss_pred CchHHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHh-----------------c--CCCCeEEEEc
Confidence 77 8899999999999999999876 789999999999999999988 3 7899999999
Q ss_pred CCCHHHHHHHHHHHHhCCeEEeCCCC-------CCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCC
Q 013869 76 KPSFEFVAGVLGTWFSGCIAVPLALS-------YPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN 148 (435)
Q Consensus 76 ~~~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (435)
+|++++++++|||+++|+++++++.. ...+++.++++.+++++++++.+..+.+...... +. +.....
T Consensus 62 ~~~~e~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~----~~-~~~~~~ 136 (525)
T PRK05851 62 EPTVELVAAIQGAWLAGAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS----VT-VHDLAT 136 (525)
T ss_pred CCCHHHHHHHHHHHHcCCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc----cc-cccccc
Confidence 99999999999999999986543211 1234556678999999999998776554432111 00 000000
Q ss_pred CCCccccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCC-CCCeeEEeecchhhhHHH
Q 013869 149 VSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT-SADQFLHCLPLHHVHGLF 227 (435)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~-~~~~~l~~~pl~~~~g~~ 227 (435)
.. ............++++++++|||||||.||+|.++|+++.+.+......+++. +.|++++.+|++|.+++.
T Consensus 137 ~~------~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 210 (525)
T PRK05851 137 AA------HTNRSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLA 210 (525)
T ss_pred cc------cccccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHH
Confidence 00 00000011224678999999999999999999999999999998888888888 899999999999999986
Q ss_pred HHHHHHHHcCCEEEEcCC--c--chhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhcc
Q 013869 228 NALLAPLYAGATVEFMPK--F--SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK 303 (435)
Q Consensus 228 ~~~~~~l~~G~~~~~~~~--~--~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~ 303 (435)
.++.++..|+++++.+. + ++..+++. +.++++|++...|.++..+.+..+ .....+++
T Consensus 211 -~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~p~~~~~~l~~~~~-------~~~~~~l~ 272 (525)
T PRK05851 211 -FLLTAALAGAPLWLAPTTAFSASPFRWLSW----------LSDSRATLTAAPNFAYNLIGKYAR-------RVSDVDLG 272 (525)
T ss_pred -HHHHHHHcCCeEEEcCHHHHHHCHHHHHHH----------HHHhCCeEEeCCcHHHHHHHHhhc-------cccCCCHH
Confidence 58899999999999873 3 35566666 566899987554444444433211 11233578
Q ss_pred ccEEEEecCCCCCHHHHHHHHHH---hCC---cccccccCccccchhccCCC---------------CCCCCCccceecC
Q 013869 304 QLRLMMCGSSALPLPVMQQWETI---TGH---RLLERYGMTEFVMAISNPLR---------------GARKAGTVGNPLP 362 (435)
Q Consensus 304 ~lr~i~~~G~~l~~~l~~~~~~~---~~~---~l~~~YG~tE~~~~~~~~~~---------------~~~~~~~~G~p~~ 362 (435)
++|.+++||+++++++.+.|.+. ++. ++++.||+||++..++.... ......++|+|++
T Consensus 273 ~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~ 352 (525)
T PRK05851 273 ALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIP 352 (525)
T ss_pred HhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCC
Confidence 89999999999999999999875 344 49999999999765543211 0123457999999
Q ss_pred CCeEEEecCCCCC-CCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 363 GVQVKIAEDESGS-DAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 363 ~~~~~i~d~~~~~-~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|++++|+|+++.. ++.+ .|||+++|++++.||+++++.+ .+|||+|||+|+++ +|+++++||.||+|
T Consensus 353 g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i 421 (525)
T PRK05851 353 GMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQAPID-----PDDWFPTGDLGYLV-DGGLVVCGRAKELI 421 (525)
T ss_pred CcEEEEECCCCCccCCCCCeEEEEEecCchhhccccCCccC-----CCCceeccceEEEE-CCEEEEEeecCCEE
Confidence 9999999977643 4555 7999999999999999988643 47899999999996 79999999999986
No 77
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.9e-52 Score=416.37 Aligned_cols=396 Identities=26% Similarity=0.383 Sum_probs=323.4
Q ss_pred HHHHHHh-cccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHH
Q 013869 4 FKAAYKK-GSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV 82 (435)
Q Consensus 4 ~~~~~~~-~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~ 82 (435)
.+++.++ ++.+||++|++++++.+||.||.++++++|++|.+ .|+++|++|+++++|+++++
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~-----------------~g~~~g~~v~l~~~~~~~~~ 69 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRR-----------------LGVKREERVLLLMLDGVDFP 69 (508)
T ss_pred HHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHHHH
Confidence 4556665 57799999999999999999999999999999998 49999999999999999999
Q ss_pred HHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCcccc----ccc
Q 013869 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTV----FDQ 158 (435)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 158 (435)
+.++||+++|++++|+++.++.+++.++++.+++++++++++..+.+.+.....+.....+............ ...
T Consensus 70 ~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (508)
T TIGR02262 70 IAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATE 149 (508)
T ss_pred HHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcC
Confidence 9999999999999999999999999999999999999999988776665543322111111000000000000 000
Q ss_pred hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHH-HHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcC
Q 013869 159 SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM-LTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (435)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G 237 (435)
..........++++++++|||||||.||+|.++|+++...+.. ....+++..+++++..+|++|..++...++.++..|
T Consensus 150 ~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G 229 (508)
T TIGR02262 150 SEQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVG 229 (508)
T ss_pred CCccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcC
Confidence 0111123445789999999999999999999999999887765 345668899999999999999999877788899999
Q ss_pred CEEEEcCC-cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCC
Q 013869 238 ATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALP 316 (435)
Q Consensus 238 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~ 316 (435)
+++++.++ +++..++.. +.++++|.+.++|.++..+++... ......+++|.++++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~~~~~~~--------~~~~~~~~l~~~~~~G~~l~ 291 (508)
T TIGR02262 230 ATTVLMGERPTPDAVFDR----------LRRHQPTIFYGVPTLYAAMLADPN--------LPAEDQVRLRLCTSAGEALP 291 (508)
T ss_pred ceEEEeCCCCCHHHHHHH----------HHHHCCcEEecchHHHHHHhcCcc--------ccccccccceeEEEcCCCCC
Confidence 99998764 577777777 566899999999999988876421 11223568999999999999
Q ss_pred HHHHHHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCcccccc
Q 013869 317 LPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYW 395 (435)
Q Consensus 317 ~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~ 395 (435)
+++.+.|.+.++.++++.||+||++.+++..........++|+|+++++++++|+++..++.+ .|||+++|+.++.||+
T Consensus 292 ~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~Gel~i~~~~~~~gY~ 371 (508)
T TIGR02262 292 AEVGQRWQARFGVDIVDGIGSTEMLHIFLSNLPGDVRYGTSGKPVPGYRLRLVGDGGQDVAAGEPGELLISGPSSATMYW 371 (508)
T ss_pred HHHHHHHHHHhCCchhhCccccccCceeecCCccCCCCCCcCCCCCCcEEEEECCCCCCCCCCCeeEEEEecCccccccC
Confidence 999999999999999999999999876554333334566899999999999999888777666 7999999999999999
Q ss_pred CCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 396 KLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 396 ~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++++.+...|. ++||+|||++++++||.++++||.+|+|
T Consensus 372 ~~~~~~~~~~~-~~~~~TGD~~~~~~~g~~~~~gR~~d~i 410 (508)
T TIGR02262 372 NNRAKTRDTFQ-GEWTRSGDKYVRNDDGSYTYAGRTDDML 410 (508)
T ss_pred CCHHHhHhhhh-cCceeccceEEEcCCccEEEecccccee
Confidence 99999988884 7999999999999999999999999986
No 78
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-52 Score=418.60 Aligned_cols=388 Identities=19% Similarity=0.318 Sum_probs=311.9
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccC-CCCCeEEEEeCCCHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAG-GCGARIGIVAKPSFE 80 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~-~~g~~V~i~~~~~~~ 80 (435)
|+.++|.+++ .|+++|+++.+.++||+||.++++++|..|.+. |+ ++||+|+++++|+++
T Consensus 4 ~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~-----------------g~~~~~~~V~i~~~n~~~ 64 (540)
T PRK13388 4 TIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIAL-----------------ADPDRPLHVGVLLGNTPE 64 (540)
T ss_pred hHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCCCcH
Confidence 5677887765 599999999999999999999999999999994 89 799999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchh
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
++++++||+++|++++|++|.++.+++.++++.+++++++++++..+.+..... ....+..+... ... ........
T Consensus 65 ~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~i~~~~~-~~~--~~~~~~~~ 140 (540)
T PRK13388 65 MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDL-PGVRVLDVDTP-AYA--ELVAAAGA 140 (540)
T ss_pred HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcc-cCceEEEccch-hhh--hhhccccC
Confidence 999999999999999999999999999999999999999999887765544311 01111111100 000 00000000
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEE
Q 013869 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (435)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~ 240 (435)
..+.....++++++++|||||||.||+|.++|+++..........+++..+|+++..+|++|..+++..++.++..|+++
T Consensus 141 ~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~ 220 (540)
T PRK13388 141 LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAV 220 (540)
T ss_pred cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEE
Confidence 11112356799999999999999999999999999988888888889999999999999999998876566789999999
Q ss_pred EEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHH
Q 013869 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (435)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~ 320 (435)
++.+.+++..+++. ++++++|++..+|..+..++...+.. ....++++.+ + |+.++++..
T Consensus 221 v~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~l~~l~~~~~~~--------~~~~~~l~~~-~-G~~~~~~~~ 280 (540)
T PRK13388 221 ALPAKFSASGFLDD----------VRRYGATYFNYVGKPLAYILATPERP--------DDADNPLRVA-F-GNEASPRDI 280 (540)
T ss_pred EECCCCCHHHHHHH----------HHHhCCeEEEehHHHHHHHHhCCCCc--------cccccceEEE-E-CCCCCHHHH
Confidence 99988888888888 66699999999999999888653211 1122456643 3 667788888
Q ss_pred HHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEE-----------EecCCCCCCC-C-ccceEEEe-
Q 013869 321 QQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVK-----------IAEDESGSDA-A-GVGEICVK- 386 (435)
Q Consensus 321 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~-----------i~d~~~~~~~-~-~~Gel~v~- 386 (435)
+.|.+.++.++++.||+||++.+++... ....+++|+|++|+++. ++|++|+... + ..|||+++
T Consensus 281 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~--~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~~~~~~GEl~v~~ 358 (540)
T PRK13388 281 AEFSRRFGCQVEDGYGSSEGAVIVVREP--GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLNADEAIGELVNTA 358 (540)
T ss_pred HHHHHHhCCceecccccccccceeecCC--CCCCCCCCCCCCCcEEEcCCCCccccceeccCccccccCCCcceEEEEec
Confidence 9999999999999999999987665432 23467899999998753 4455555542 2 37999998
Q ss_pred cCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 387 SPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 387 ~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|+.++.||+++++.+.+.| .+|||+|||+|++|+||++++.||++|+|
T Consensus 359 g~~~~~gY~~~~~~t~~~~-~~g~~~TGD~~~~~~dg~l~i~GR~~d~i 406 (540)
T PRK13388 359 GAGFFEGYYNNPEATAERM-RHGMYWSGDLAYRDADGWIYFAGRTADWM 406 (540)
T ss_pred CCcccccccCChHHHHHHh-hcCceeccceEEEcCCCcEEEeccCCceE
Confidence 9999999999999998888 47999999999999999999999999975
No 79
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-52 Score=428.58 Aligned_cols=397 Identities=19% Similarity=0.227 Sum_probs=305.9
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC-----cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeC
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~ 76 (435)
|+.+++.++ .+|+++|++..+ +++||+||.+++.++|+.|++ .|+++||+|+++++
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~ 147 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRA-----------------LGVGPGDRVAAYLP 147 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 444555443 579999999743 689999999999999999999 49999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhh---------HHHHHHHHhccCC--ccccCCC
Q 013869 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKSGA--KFSLIPP 145 (435)
Q Consensus 77 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~--~~~~~~~ 145 (435)
|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+.......+. .+..+..
T Consensus 148 n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 227 (655)
T PRK03584 148 NIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPY 227 (655)
T ss_pred CCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEec
Confidence 9999999999999999999999999999999999999999999998753 2233333222221 1111111
Q ss_pred CCC------C---CCcccccc--chhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHH-HHHHHHHhccCCCCCe
Q 013869 146 VPN------V---SSETTVFD--QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA-QVQMLTEAWEYTSADQ 213 (435)
Q Consensus 146 ~~~------~---~~~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~-~~~~~~~~~~~~~~~~ 213 (435)
... . ........ ............+++++|+|||||||.||||.++|.+++. ........+++.++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~ 307 (655)
T PRK03584 228 LGPAAAAAALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDR 307 (655)
T ss_pred CCCcccccccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCE
Confidence 100 0 00000000 0001112345678999999999999999999999998754 4555566778899999
Q ss_pred eEEeecchhhhHHHHHHHHHHHcCCEEEEcCC----cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhcc
Q 013869 214 FLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA 289 (435)
Q Consensus 214 ~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 289 (435)
+++..++.|..+. .+++++..|+++++.+. +++..+++. ++++++|++..+|++++.+.+....
T Consensus 308 ~~~~~~~~~~~~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~ 375 (655)
T PRK03584 308 FFWYTTCGWMMWN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDL----------AAEEGVTVFGTSAKYLDACEKAGLV 375 (655)
T ss_pred EEEcCCchHHhHH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHH----------HHHHCCEEEEcCHHHHHHHHhcCCC
Confidence 9999999887653 37789999999999763 466777777 6679999999999999988753110
Q ss_pred ccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHh--CCcccccccCccccchhc-cCCCCCCCCCccceecCCCeE
Q 013869 290 MDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQV 366 (435)
Q Consensus 290 ~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~--~~~l~~~YG~tE~~~~~~-~~~~~~~~~~~~G~p~~~~~~ 366 (435)
.....++++||.++++|+++++++.+.|.+.+ ++.+.+.||+||++.... .........+++|.|.+|+++
T Consensus 376 ------~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~ 449 (655)
T PRK03584 376 ------PGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAV 449 (655)
T ss_pred ------ccccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCcee
Confidence 11234678999999999999999999999988 478999999999854332 222223456789999999999
Q ss_pred EEecCCCCCCCCccceEEEecC--CccccccCCchhcc--cccc--cCCccccCceEEEcCCccEEEecccccCC
Q 013869 367 KIAEDESGSDAAGVGEICVKSP--SLFKEYWKLPKVTK--DSFT--ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 367 ~i~d~~~~~~~~~~Gel~v~~~--~~~~gy~~~~~~~~--~~~~--~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+|+|+++...++..|||+++|+ +++.||+++++.++ +.+. -+|||+|||+|++|+||+++++||.||+|
T Consensus 450 ~ivd~~g~~~~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~I 524 (655)
T PRK03584 450 EAWDEDGRPVVGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATL 524 (655)
T ss_pred EEECCCCCCCCCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCee
Confidence 9999999888555899999996 78999999987543 2221 15789999999999999999999999986
No 80
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-52 Score=419.40 Aligned_cols=399 Identities=24% Similarity=0.354 Sum_probs=321.4
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+++.+.|.++++.+|+++|+...++++||.||.+++.++|.+|.+. |+++|++|+++++|+++
T Consensus 33 ~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~-----------------g~~~g~~V~i~~~n~~~ 95 (567)
T PRK06178 33 RPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQR-----------------GVGAGDRVAVFLPNCPQ 95 (567)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCcH
Confidence 3688999999999999999999999999999999999999999994 99999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCC-CC--------
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV-SS-------- 151 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------- 151 (435)
++++++||+++|++++|++|..+..++.+++++++++++++++...+.+.............+...... ..
T Consensus 96 ~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 175 (567)
T PRK06178 96 FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPD 175 (567)
T ss_pred HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccccccccc
Confidence 999999999999999999999999999999999999999999988777665543322111111000000 00
Q ss_pred -----------ccccccc----hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHH-hccCCCCCeeE
Q 013869 152 -----------ETTVFDQ----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE-AWEYTSADQFL 215 (435)
Q Consensus 152 -----------~~~~~~~----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~~l 215 (435)
....... ...........+++++++|||||||.||+|.+||+++......... ...+...++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l 255 (567)
T PRK06178 176 SLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFL 255 (567)
T ss_pred ccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEE
Confidence 0000000 0001122356789999999999999999999999998876655443 35678899999
Q ss_pred EeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHH
Q 013869 216 HCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQ 295 (435)
Q Consensus 216 ~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 295 (435)
.++|++|..|+...++.++..|+++++.+++++..++.. ++++++|.+.++|..+..+.+....
T Consensus 256 ~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~~l~~~~~~------ 319 (567)
T PRK06178 256 SFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAA----------VERYRVTRTVMLVDNAVELMDHPRF------ 319 (567)
T ss_pred EecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHH----------HHHhCCeEEeccHHHHHHHHhCCCC------
Confidence 999999999987678899999999999999999988888 5668999999999999888764221
Q ss_pred HHhhhhccccEEEEe--cCCCCCHHHHHHHHHHhCCcccc-cccCccccchhccCC--C-----CCCCCCccceecCCCe
Q 013869 296 AASASAAKQLRLMMC--GSSALPLPVMQQWETITGHRLLE-RYGMTEFVMAISNPL--R-----GARKAGTVGNPLPGVQ 365 (435)
Q Consensus 296 ~~~~~~l~~lr~i~~--~G~~l~~~l~~~~~~~~~~~l~~-~YG~tE~~~~~~~~~--~-----~~~~~~~~G~p~~~~~ 365 (435)
...++++++.+.. .++.+++++.+.|++.++..++. .||+||++..+.... . ....+.++|+|++|++
T Consensus 320 --~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~ 397 (567)
T PRK06178 320 --AEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTE 397 (567)
T ss_pred --CCCCcchheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcE
Confidence 1234567777654 45899999999999999877665 799999875433211 1 1234567999999999
Q ss_pred EEEec-CCCCCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 366 VKIAE-DESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 366 ~~i~d-~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++++| +++..++.+ .|||+++|++++.||+++++.+...|. +|||+|||+|++++||+++++||++|+|
T Consensus 398 v~v~d~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~-dg~~~TGDl~~~~~~g~l~i~GR~~d~i 468 (567)
T PRK06178 398 FKICDFETGELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALR-DGWLHTGDIGKIDEQGFLHYLGRRKEML 468 (567)
T ss_pred EEEEcCCCCCcCCCCCceEEEEECCcccccccCChhhhhhccc-CCceeecceEEEecCCeEEEEecccccE
Confidence 99999 556666666 799999999999999999999988874 7899999999999999999999999986
No 81
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.7e-52 Score=416.39 Aligned_cols=386 Identities=18% Similarity=0.291 Sum_probs=318.5
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.+.|.++++.+|+++|+...++++||+||.+++.++|.+|.+. |+++|++|+++++|++++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~-----------------g~~~~~~V~i~~~~~~~~ 63 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKR-----------------ILPKKSPIIVYGHMEPHM 63 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHh-----------------CCCCCCeEEEEeCCCHHH
Confidence 578999999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhh
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
++++|||+++|++++|+++.++.+++.++++..+++.++++++....... ..+..+...... .......
T Consensus 64 ~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~------~~~~~~~~~~~~-----~~~~~~~ 132 (502)
T TIGR01734 64 LVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG------TQIITLSALEQA-----ETSGGPV 132 (502)
T ss_pred HHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC------CceEEchHhhhh-----hhhcCCc
Confidence 99999999999999999999999999999999999999998865432211 011111000000 0000001
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEE
Q 013869 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (435)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~ 241 (435)
.......+++.++++|||||||.||+|.++|+++...+.+....+++...++++...|++|..++. .++.++..|++++
T Consensus 133 ~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~l~~G~~~~ 211 (502)
T TIGR01734 133 SFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVM-DLYPCLASGGTLH 211 (502)
T ss_pred cccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHH-HHHHHHHCCCEEE
Confidence 112234678999999999999999999999999999998888888889999999999999999886 5899999999999
Q ss_pred EcCCc---chhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHH
Q 013869 242 FMPKF---SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (435)
Q Consensus 242 ~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~ 318 (435)
+.++. ++..+++. +.+++++.+.++|+++..++.... .....+++++.++++|++++.+
T Consensus 212 ~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~p~~~~~~l~~~~--------~~~~~~~~l~~~~~~G~~~~~~ 273 (502)
T TIGR01734 212 CLDKDITNNFKLLFEE----------LPKTGLNVWVSTPSFVDMCLLDPN--------FNQENYPHLTHFLFCGEELPVK 273 (502)
T ss_pred EcCHHHhcCHHHHHHH----------HHHcCCeEEEEChhHHHHHHhccc--------cccccCCcccEEEEcCCcCCHH
Confidence 98864 45555555 666999999999999987765321 1234578999999999999999
Q ss_pred HHHHHHHHh-CCcccccccCccccchhccC-----CCCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCcc
Q 013869 319 VMQQWETIT-GHRLLERYGMTEFVMAISNP-----LRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLF 391 (435)
Q Consensus 319 l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~-----~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~ 391 (435)
+.+.+.+.+ ++++++.||+||++..++.. ........++|.|.++++++|+|+++...+.+ .|||+++|+.++
T Consensus 274 ~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~~Gel~v~g~~~~ 353 (502)
T TIGR01734 274 TAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGEKGEIVIVGPSVS 353 (502)
T ss_pred HHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCCeeEEEEcccccc
Confidence 999999988 78999999999987543321 11223446799999999999999988887766 799999999999
Q ss_pred ccccCCchhccccc---ccCCccccCceEEEcCCccEEEecccccCC
Q 013869 392 KEYWKLPKVTKDSF---TADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 392 ~gy~~~~~~~~~~~---~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
.||+++++.+...| ++.+||+|||+|++|++ ++++.||.+|+|
T Consensus 354 ~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i 399 (502)
T TIGR01734 354 KGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQI 399 (502)
T ss_pred ccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeE
Confidence 99999999888776 23469999999999876 999999999976
No 82
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=6.3e-53 Score=500.27 Aligned_cols=388 Identities=21% Similarity=0.341 Sum_probs=328.2
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
+++++|.++++++|+++|++..++++||+||.++++++|+.|.+. |+++|++|+++++|++++
T Consensus 512 ~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~-----------------gv~~g~~V~l~~~~s~~~ 574 (5163)
T PRK12316 512 GVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIER-----------------GVGPDVLVGVAMERSIEM 574 (5163)
T ss_pred CHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 588999999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhh
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
+++++||+++|++++|++|.++.+++.++++.+++++++++.+....+... ....+..+..... . .......
T Consensus 575 i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~---~--~~~~~~~ 646 (5163)
T PRK12316 575 VVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLA---AGVQVLDLDRPAA---W--LEGYSEE 646 (5163)
T ss_pred HHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcc---cCceEEEecCcch---h--hccCCCC
Confidence 999999999999999999999999999999999999999998765432110 0011111110000 0 0011111
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEE
Q 013869 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (435)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~ 241 (435)
.+.....++++++++|||||||.||||.++|+++.+.+.+....+++.++++++...|++|..+++ .++.+|..|++++
T Consensus 647 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~-~~~~~L~~G~~l~ 725 (5163)
T PRK12316 647 NPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVW-EFFWPLMSGARLV 725 (5163)
T ss_pred CCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHH-HHHHHHhCCCEEE
Confidence 122345678999999999999999999999999999999999999999999999999999999986 6999999999999
Q ss_pred EcCC---cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHH
Q 013869 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (435)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~ 318 (435)
+.+. +++..+++. +.++++|++.++|++++.|++.. ....++++|.+++||++++++
T Consensus 726 i~~~~~~~~~~~~~~~----------i~~~~vt~~~~~Ps~~~~l~~~~----------~~~~~~~l~~~~~gGe~l~~~ 785 (5163)
T PRK12316 726 VAAPGDHRDPAKLVEL----------INREGVDTLHFVPSMLQAFLQDE----------DVASCTSLRRIVCSGEALPAD 785 (5163)
T ss_pred ECCccccCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhcc----------ccccCCCccEEEEeeccCCHH
Confidence 9864 677777777 66699999999999999997631 123578899999999999999
Q ss_pred HHHHHHHHh-CCcccccccCccccchhcc--CCCCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccc
Q 013869 319 VMQQWETIT-GHRLLERYGMTEFVMAISN--PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEY 394 (435)
Q Consensus 319 l~~~~~~~~-~~~l~~~YG~tE~~~~~~~--~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy 394 (435)
+.+.|.+.+ +.+++|.||+||++..++. .........++|+|++|++++|+|++++.++.+ .|||+|+|++++.||
T Consensus 786 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~GEl~i~G~~v~~GY 865 (5163)
T PRK12316 786 AQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDANLEPVPVGVLGELYLAGRGLARGY 865 (5163)
T ss_pred HHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCCCCCCCCCCceEEEecccccChhh
Confidence 999998876 6899999999999854332 122234567899999999999999999888877 799999999999999
Q ss_pred cCCchhcccccc------cCCccccCceEEEcCCccEEEecccccCC
Q 013869 395 WKLPKVTKDSFT------ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 395 ~~~~~~~~~~~~------~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+++|+.|++.|. +++||+|||+|++++||.|+|+||+||+|
T Consensus 866 l~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~i 912 (5163)
T PRK12316 866 HGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQV 912 (5163)
T ss_pred CCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEE
Confidence 999999999884 34699999999999999999999999986
No 83
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=5.9e-53 Score=500.52 Aligned_cols=388 Identities=24% Similarity=0.319 Sum_probs=326.0
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++++.|.++++++|+++|+++.++++||+||+++++++|..|.++ |+++|++|+|+++|++++
T Consensus 2004 ~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~-----------------gv~~g~~V~l~~~~s~~~ 2066 (5163)
T PRK12316 2004 GVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRAR-----------------GVGPEVRVAIAAERSFEL 2066 (5163)
T ss_pred CHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 588999999999999999999999999999999999999999995 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhh
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
++++|||+++|+++||++|.++.+++.++++.+++++++++++....+.... ......+... .........
T Consensus 2067 ~~~~lAil~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~---~~~~~~~~~~------~~~~~~~~~ 2137 (5163)
T PRK12316 2067 VVALLAVLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPA---GVARLPLDRD------AEWADYPDT 2137 (5163)
T ss_pred HHHHHHHHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhccccc---ccceEeccch------hhhhccCcc
Confidence 9999999999999999999999999999999999999999987654432100 0001111000 000011111
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEE
Q 013869 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (435)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~ 241 (435)
.+.....+++++|++|||||||.||||.++|+++.+.+......+++.+.++++...|++|..+++ .++.+|..|++++
T Consensus 2138 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~~~ 2216 (5163)
T PRK12316 2138 APAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHE-QWFHPLLNGARVL 2216 (5163)
T ss_pred CCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHH-HHHHHHhCCCEEE
Confidence 122345789999999999999999999999999999999999999999999999999999988875 6999999999998
Q ss_pred EcCC--cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHH
Q 013869 242 FMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (435)
Q Consensus 242 ~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l 319 (435)
+.+. +++..++.. +.++++|++.++|+++..+.+... .....+++|.+++||+++++++
T Consensus 2217 ~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~---------~~~~~~~lr~~~~gGe~l~~~~ 2277 (5163)
T PRK12316 2217 IRDDELWDPEQLYDE----------MERHGVTILDFPPVYLQQLAEHAE---------RDGRPPAVRVYCFGGEAVPAAS 2277 (5163)
T ss_pred eCCcccCCHHHHHHH----------HHHcCCeEEEcChHHHHHHHhhhh---------cccCCcceeEEEEecccCCHHH
Confidence 8764 567777777 666999999999999999976422 1123358999999999999999
Q ss_pred HHHHHHHh-CCcccccccCccccchhccCCC--CC---CCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccc
Q 013869 320 MQQWETIT-GHRLLERYGMTEFVMAISNPLR--GA---RKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFK 392 (435)
Q Consensus 320 ~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~--~~---~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~ 392 (435)
.++|.+.+ +.++++.||+||++..++.... .. ....++|+|++|++++|+|++++.++.+ .|||+|+|+++++
T Consensus 2278 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~g~~GEl~i~G~~v~~ 2357 (5163)
T PRK12316 2278 LRLAWEALRPVYLFNGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILDADLNLLAPGMAGELYLGGEGLAR 2357 (5163)
T ss_pred HHHHHHhCCCcEEEECccchhheeeeeeeecccccccCCCcCCcccccCCCEEEEECCCCCCCCCCCeeEEEecchhhcc
Confidence 99999877 5789999999999865542211 11 1235799999999999999999888887 7999999999999
Q ss_pred cccCCchhccccccc-------CCccccCceEEEcCCccEEEecccccCC
Q 013869 393 EYWKLPKVTKDSFTA-------DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 393 gy~~~~~~~~~~~~~-------~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
||+++|+.|.++|.. ++||+|||+|++++||.|+++||+||+|
T Consensus 2358 GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~i 2407 (5163)
T PRK12316 2358 GYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQV 2407 (5163)
T ss_pred cccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeE
Confidence 999999999999843 4699999999999999999999999986
No 84
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=9.5e-53 Score=491.67 Aligned_cols=388 Identities=24% Similarity=0.384 Sum_probs=326.2
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
+++++|.++++++||++|+++.++++||+||.++++++|++|.+. |+++|++|+|++++++++
T Consensus 513 ~~~~~~~~~a~~~pd~~Al~~~~~~lTY~eL~~~a~~lA~~L~~~-----------------Gv~~g~~V~i~~~~s~~~ 575 (3956)
T PRK12467 513 CVHQLIEAQARQHPERPALVFGEQVLSYAELNRQANRLAHVLIAA-----------------GVGPDVLVGIAVERSIEM 575 (3956)
T ss_pred CHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 578999999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhh
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
+++++||+++|++++|+++.++.+++.++++++++++++++++....+.. ........+..... ........
T Consensus 576 vv~~lail~aG~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~ 647 (3956)
T PRK12467 576 VVGLLAVLKAGGAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQLPV---PAGLRSLCLDEPAD-----LLCGYSGH 647 (3956)
T ss_pred HHHHHHHHHhCcEEeccCCCChHHHHHHHHHhcCCCEEEechhhhhhccc---ccCccEEEeccccc-----cccccCCC
Confidence 99999999999999999999999999999999999999999865433211 00011111110000 00001111
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEE
Q 013869 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (435)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~ 241 (435)
.+.....++++++++|||||||.||||.++|+++.+.+.+....+++.++++++...|++|..+++ .++.++..|++++
T Consensus 648 ~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~lv 726 (3956)
T PRK12467 648 NPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDLGVT-ELFGALASGATLH 726 (3956)
T ss_pred CCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhHHHH-HHHHHHhCCCEEE
Confidence 112345689999999999999999999999999999999999999999999999999999999986 6999999999999
Q ss_pred EcCC---cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHH
Q 013869 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (435)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~ 318 (435)
+.+. +++..+++. |.++++|++.++|+++..+++... ....+++|.+++||++++++
T Consensus 727 ~~~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~~~~l~~~~~----------~~~~~~lr~i~~gGe~l~~~ 786 (3956)
T PRK12467 727 LLPPDCARDAEAFAAL----------MADQGVTVLKIVPSHLQALLQASR----------VALPRPQRALVCGGEALQVD 786 (3956)
T ss_pred EcCccccCCHHHHHHH----------HHHcCCeEEEcCHHHHHHHHhhhc----------cccCCcccEEEEEeecCCHH
Confidence 9884 577777777 666999999999999999986422 12346689999999999999
Q ss_pred HHHHHHHHh-CCcccccccCccccchhccCCCC----CCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccc
Q 013869 319 VMQQWETIT-GHRLLERYGMTEFVMAISNPLRG----ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFK 392 (435)
Q Consensus 319 l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~~----~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~ 392 (435)
+.+.|.+.+ +.+++|.||+||+++.++..... .....++|+|+++++++|+|++++.++.+ .|||+|+|+++++
T Consensus 787 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~G~~GEL~i~G~~v~~ 866 (3956)
T PRK12467 787 LLARVRALGPGARLINHYGPTETTVGVSTYELSDEERDFGNVPIGQPLANLGLYILDHYLNPVPVGVVGELYIGGAGLAR 866 (3956)
T ss_pred HHHHHHHhCCCCEEEeCcCCChhhhheeeEecccccccCCCCcccCCcCCCEEEEECCCCCCCCCCCceEEEecccccch
Confidence 999999986 68999999999998765532211 11236799999999999999999888877 7999999999999
Q ss_pred cccCCchhccccccc-------CCccccCceEEEcCCccEEEecccccCC
Q 013869 393 EYWKLPKVTKDSFTA-------DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 393 gy~~~~~~~~~~~~~-------~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
||+++|+.|.+.|.. ++||+|||+|++++||.++++||+||+|
T Consensus 867 GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~v 916 (3956)
T PRK12467 867 GYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRADGVIEYLGRMDHQV 916 (3956)
T ss_pred hhcCCccccHhhCcCCCCCCCCceeEecCceeEEcCCCcEEEeccccCeE
Confidence 999999999998843 3499999999999999999999999985
No 85
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7e-52 Score=417.95 Aligned_cols=399 Identities=23% Similarity=0.336 Sum_probs=316.7
Q ss_pred ChHHHHHHHhcccCCCeeEEEeC---CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCC
Q 013869 1 MEVFKAAYKKGSMARDSVAIRAD---QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~---~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~ 77 (435)
+|+.++|.+.+..+|+++|++++ ++++||+||.++++++|.+|.+. .|+++||+|+++++|
T Consensus 10 ~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~----------------~g~~~gd~V~~~~~n 73 (576)
T PRK05620 10 LSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDE----------------LGITGDQRVGSMMYN 73 (576)
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEEeCC
Confidence 57899999999999999999874 37999999999999999999863 499999999999999
Q ss_pred CHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCc--cccCCCCCCC------
Q 013869 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK--FSLIPPVPNV------ 149 (435)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------ 149 (435)
+++++++++||+++|++++|+++.++.+++.++++.++++++++++...+.+.......... +..+......
T Consensus 74 ~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 153 (576)
T PRK05620 74 CAEHLEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHM 153 (576)
T ss_pred CHHHHHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhcc
Confidence 99999999999999999999999999999999999999999999998777666554433211 1111100000
Q ss_pred C------Ccccccc-chhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHH--HHhccCCCCCeeEEeecc
Q 013869 150 S------SETTVFD-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQML--TEAWEYTSADQFLHCLPL 220 (435)
Q Consensus 150 ~------~~~~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~--~~~~~~~~~~~~l~~~pl 220 (435)
. ......+ ...........++++++++|||||||.||+|.++|+++....... ...+++..++++++.+|+
T Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl 233 (576)
T PRK05620 154 PEGIKVYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPI 233 (576)
T ss_pred ccccccccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCCh
Confidence 0 0000000 000011224567899999999999999999999999986655432 334678889999999999
Q ss_pred hhhhHHHHHHHHHHHcCCEEEEcC-CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhh
Q 013869 221 HHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299 (435)
Q Consensus 221 ~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 299 (435)
+|..++. .++.++..|+++++.+ .+++..+++. +.++++|++.++|+++..++..... ..
T Consensus 234 ~h~~g~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~--------~~ 294 (576)
T PRK05620 234 YHVLSWG-VPLAAFMSGTPLVFPGPDLSAPTLAKI----------IATAMPRVAHGVPTLWIQLMVHYLK--------NP 294 (576)
T ss_pred HHhhhhH-HHHHHHhcCceEEecCCCCCHHHHHHH----------HHHhcCceeeecCHHHHHHHHHhhc--------cC
Confidence 9999986 4788999999999876 4678887777 5668999999999999988764221 11
Q ss_pred hhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCC--------CCCCCccceecCCCeEEEecC
Q 013869 300 SAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--------ARKAGTVGNPLPGVQVKIAED 371 (435)
Q Consensus 300 ~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~--------~~~~~~~G~p~~~~~~~i~d~ 371 (435)
...+++|.+++||+.+++++.+.|.+.++.++++.||+||++.+++..... .....++|++.++++++++|+
T Consensus 295 ~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~ 374 (576)
T PRK05620 295 PERMSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND 374 (576)
T ss_pred cccCceeEEEEcCCCCCHHHHHHHHHHhCCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC
Confidence 123579999999999999999999999999999999999998654421110 112347899999999999997
Q ss_pred CCCCCC---CccceEEEecCCccccccCCchhc----------------ccccccCCccccCceEEEcCCccEEEecccc
Q 013869 372 ESGSDA---AGVGEICVKSPSLFKEYWKLPKVT----------------KDSFTADGFFKTGDTGKQDEDGYYIILGRKG 432 (435)
Q Consensus 372 ~~~~~~---~~~Gel~v~~~~~~~gy~~~~~~~----------------~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~ 432 (435)
+...+ +..|||+++|+.++.||+++++.+ ...+..+|||+|||+|++++||++++.||.+
T Consensus 375 -g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~ 453 (576)
T PRK05620 375 -GQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRAR 453 (576)
T ss_pred -CccccCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechh
Confidence 55442 247999999999999999999887 3345567999999999999999999999999
Q ss_pred cCC
Q 013869 433 IYF 435 (435)
Q Consensus 433 d~i 435 (435)
|+|
T Consensus 454 d~i 456 (576)
T PRK05620 454 DVI 456 (576)
T ss_pred hhh
Confidence 875
No 86
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.3e-52 Score=418.00 Aligned_cols=399 Identities=27% Similarity=0.447 Sum_probs=317.1
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+++.+.|.+++..+|+++|++++++.+||+||++++.++|++|.+ .|+++||+|+++++|+++
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~-----------------~gv~~gd~V~i~~~~~~~ 86 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQK-----------------LGVEKGDRVAIMLPNCPQ 86 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCChH
Confidence 367899999999999999999999999999999999999999998 499999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCC---C-------
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV---S------- 150 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------- 150 (435)
+++++|||+++|++++|++|..+.+++.++++.++++++++++...+.+.............+...... .
T Consensus 87 ~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (563)
T PRK06710 87 AVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPF 166 (563)
T ss_pred HHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccch
Confidence 999999999999999999999999999999999999999999876554433221111000000000000 0
Q ss_pred -------------C------ccccccchh-hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh-ccCC
Q 013869 151 -------------S------ETTVFDQSQ-AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA-WEYT 209 (435)
Q Consensus 151 -------------~------~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~-~~~~ 209 (435)
. ......... .........+++++++|||||||.||+|.++|+++..+....... .+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 246 (563)
T PRK06710 167 VQKKQSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCK 246 (563)
T ss_pred hhcccccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCC
Confidence 0 000000000 000111235789999999999999999999999987654433332 3333
Q ss_pred C-CCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhc
Q 013869 210 S-ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (435)
Q Consensus 210 ~-~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 288 (435)
. .+++++..|++|..++...++.++..|+++++.+++++..+++. +.++++|++.++|+++..+++...
T Consensus 247 ~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~ 316 (563)
T PRK06710 247 EGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEA----------IKKHKVTLFPGAPTIYIALLNSPL 316 (563)
T ss_pred CCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHH----------HHHcCCeEEeccHHHHHHHHcCCc
Confidence 3 45889999999999887667789999999999998888888887 666999999999999999886432
Q ss_pred cccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCC-CCCCCCccceecCCCeEE
Q 013869 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQVK 367 (435)
Q Consensus 289 ~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~~~G~p~~~~~~~ 367 (435)
. ....++++|.+++||+++++++.+.+.+.++.++++.||+||++.+...... .....+++|+|.+++.++
T Consensus 317 ~--------~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 388 (563)
T PRK06710 317 L--------KEYDISSIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAM 388 (563)
T ss_pred c--------ccCChhhhhheeeCCCcCCHHHHHHHHHhhCCCEecccccccCccccccCcccccccCCccCCCCCCCeEE
Confidence 1 1224578999999999999999999999999999999999999875543221 223456899999999999
Q ss_pred Eec-CCCCCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 368 IAE-DESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 368 i~d-~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++| +++..++.+ .|||+++|+.++.||+++++.+...+. +|||+|||+|++++||.++++||.+|+|
T Consensus 389 i~~~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~~~~~GR~dd~i 457 (563)
T PRK06710 389 IMSLETGEALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQ-DGWLHTGDVGYMDEDGFFYVKDRKKDMI 457 (563)
T ss_pred EEECCCCccCCCCCceEEEEecCccchhhhCChHHHhhhcc-cCcccccceEEEcCCCcEEEeeccccEE
Confidence 998 455666655 799999999999999999999988774 7999999999999999999999999975
No 87
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=4.3e-52 Score=423.40 Aligned_cols=396 Identities=17% Similarity=0.198 Sum_probs=299.3
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC-----cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeC
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~ 76 (435)
|+.+++..+ .++++|++..+ +++||+||.+++.++|+.|++ .|+++||+|+++++
T Consensus 88 n~~~~~~~~---~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GdrV~i~~~ 147 (652)
T TIGR01217 88 NYAENLLRA---AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRA-----------------LGVRPGDRVSGYLP 147 (652)
T ss_pred eHHHHHhcc---CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 455555543 46889988732 579999999999999999999 49999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhh---------HHHHHHHHhccCC--ccccCCC
Q 013869 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKSGA--KFSLIPP 145 (435)
Q Consensus 77 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~--~~~~~~~ 145 (435)
|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.+ .+.+.++....+. .+..+..
T Consensus 148 n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~ 227 (652)
T TIGR01217 148 NIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPY 227 (652)
T ss_pred CCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeC
Confidence 9999999999999999999999999999999999999999999998753 3444444333221 1111110
Q ss_pred CCC----C---CCccccccc-----hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHH-HHHHHHHhccCCCCC
Q 013869 146 VPN----V---SSETTVFDQ-----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA-QVQMLTEAWEYTSAD 212 (435)
Q Consensus 146 ~~~----~---~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~-~~~~~~~~~~~~~~~ 212 (435)
... . .......+. ...........+++++|+|||||||.||||+++|.+++. ........+++.++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d 307 (652)
T TIGR01217 228 LGPRETEAPKIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGD 307 (652)
T ss_pred CCCcccccccccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCc
Confidence 000 0 000000000 000111234568999999999999999999999998654 444455567889999
Q ss_pred eeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC----cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhc
Q 013869 213 QFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (435)
Q Consensus 213 ~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 288 (435)
++++..|+.|.... .++.+|..|+++++.+. .++..+++. ++++++|++...|.+++.+.+. .
T Consensus 308 ~~~~~~~~~~~~~~--~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~l~~~-~ 374 (652)
T TIGR01217 308 RLFYYTTTGWMMWN--WLVSGLATGATLVLYDGSPGFPATNVLWDI----------AERTGATLFGTSAKYVMACRKA-G 374 (652)
T ss_pred EEEEeCCcchhhhH--HHHHHHhcCcEEEEECCCCCCCCchHHHHH----------HHHhCCeEEecCHHHHHHHHhc-C
Confidence 99999999998643 36689999999999863 256677777 6779999987777776665432 1
Q ss_pred cccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhC--CcccccccCccccchhc-cCCCCCCCCCccceecCCCe
Q 013869 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG--HRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQ 365 (435)
Q Consensus 289 ~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~--~~l~~~YG~tE~~~~~~-~~~~~~~~~~~~G~p~~~~~ 365 (435)
.. .....++++||.+++||+++++++.+.+.+.++ ..+.+.||+||++.... .........+++|.|.+|++
T Consensus 375 ~~-----~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~ 449 (652)
T TIGR01217 375 VH-----PARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTA 449 (652)
T ss_pred CC-----ccccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCc
Confidence 00 112346899999999999999999999999885 35678999999743322 22222334578999999999
Q ss_pred EEEecCCCCCCCCccceEEEecC--CccccccCCchhcc--cc-cc-cCCccccCceEEEcCCccEEEecccccCC
Q 013869 366 VKIAEDESGSDAAGVGEICVKSP--SLFKEYWKLPKVTK--DS-FT-ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 366 ~~i~d~~~~~~~~~~Gel~v~~~--~~~~gy~~~~~~~~--~~-~~-~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++|+|++|+.++++.|||+++|+ .++.|||++++.+. +. |. -+|||+|||+|++|+||+++++||.||+|
T Consensus 450 v~ivd~~g~~~~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I 525 (652)
T TIGR01217 450 VQSWDPEGKPVTGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTL 525 (652)
T ss_pred eEEECCCCCCCCCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeE
Confidence 99999999988766899999996 68999999998654 22 22 26899999999999999999999999986
No 88
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=6.7e-52 Score=423.90 Aligned_cols=397 Identities=20% Similarity=0.194 Sum_probs=301.7
Q ss_pred hHHH-HHHHhcccCCCeeEEEeCC--------cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 013869 2 EVFK-AAYKKGSMARDSVAIRADQ--------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (435)
Q Consensus 2 ~i~~-~~~~~~~~~p~~~al~~~~--------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (435)
|+.+ .|.+++.++|+++|++..+ +++||+||.+++.++|+.|++ +|+++||+|+
T Consensus 175 n~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GdrVa 237 (728)
T PLN03052 175 NVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDA-----------------LGFEKGDAIA 237 (728)
T ss_pred EHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 3434 4445556789999999754 379999999999999999999 4999999999
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhH------HHHHHHHhccCCccccCCCC
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR------EVLQNVASKSGAKFSLIPPV 146 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~ 146 (435)
++++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.+. +............+..+...
T Consensus 238 i~~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~ 317 (728)
T PLN03052 238 IDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPAD 317 (728)
T ss_pred EEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCC
Confidence 999999999999999999999999999999999999999999999999987542 11111111111111111110
Q ss_pred CC---CC---Ccccccc---ch------hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCC
Q 013869 147 PN---VS---SETTVFD---QS------QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSA 211 (435)
Q Consensus 147 ~~---~~---~~~~~~~---~~------~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~ 211 (435)
.. .. ......+ .. ..........+++++|+|||||||.||||+++|.+++..+......+++.++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~ 397 (728)
T PLN03052 318 GKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKG 397 (728)
T ss_pred CCccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCC
Confidence 00 00 0000000 00 0001112356899999999999999999999999988777766666788999
Q ss_pred CeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC-cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccc
Q 013869 212 DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (435)
Q Consensus 212 ~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 290 (435)
|+++...|+.|.++.+ .++++|..|+++++.++ .++..+++. ++++++|++.++|++++.+.+...
T Consensus 398 d~~~~~~~l~w~~g~~-~v~~~L~~Gat~vl~~g~p~~~~~~~~----------i~~~~vT~l~~~Pt~l~~l~~~~~-- 464 (728)
T PLN03052 398 DIVCWPTNLGWMMGPW-LVYASLLNGATLALYNGSPLGRGFAKF----------VQDAKVTMLGTVPSIVKTWKNTNC-- 464 (728)
T ss_pred cEEEECCCcHHHhHHH-HHHHHHHhCCEEEEeCCCCCCChHHHH----------HHHHCCCEEEECHHHHHHHHhcCC--
Confidence 9999999999999985 58899999999999875 455667777 667999999999999999876421
Q ss_pred cHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhC-CcccccccCccccchhc-cCCCCCCCCCccceecCCCeEEE
Q 013869 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKI 368 (435)
Q Consensus 291 ~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~-~~l~~~YG~tE~~~~~~-~~~~~~~~~~~~G~p~~~~~~~i 368 (435)
....++++||.++++|++++++....+.+.++ .++.+.||.||+++.+. .........+++|+|.+|++++|
T Consensus 465 ------~~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v 538 (728)
T PLN03052 465 ------MAGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFI 538 (728)
T ss_pred ------cccCChhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEE
Confidence 12346789999999999999999887777765 57999999999875433 22222345678999999999999
Q ss_pred ecCCCCCCCCc---cceEEEecCC--ccccccCCchhcccccc------cCCccccCceEEEcCCccEEEecccccCC
Q 013869 369 AEDESGSDAAG---VGEICVKSPS--LFKEYWKLPKVTKDSFT------ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 369 ~d~~~~~~~~~---~Gel~v~~~~--~~~gy~~~~~~~~~~~~------~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+|++|+.++.+ .|||+++++. ...+|+++.. ...-|. ++.||+|||+|++|+||+++++||+||+|
T Consensus 539 ~d~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I 615 (728)
T PLN03052 539 LDDSGNPYPDDAPCTGELALFPLMFGASSTLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTM 615 (728)
T ss_pred ECCCCCCCCCCCCceEEEEEeCCCCCCCccccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEE
Confidence 99999988764 5999998653 2356666532 222221 23499999999999999999999999986
No 89
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=3.1e-52 Score=491.32 Aligned_cols=391 Identities=19% Similarity=0.296 Sum_probs=327.9
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
+++++|.+++.++||++|+++.+.++||+||.++++++|+.|.+ +|+++|++|+|++++++++
T Consensus 3721 ~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~-----------------~gv~~~~~V~v~~~~s~~~ 3783 (4334)
T PRK05691 3721 SYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRA-----------------AGVGVDQPVALLAERGLDL 3783 (4334)
T ss_pred CHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEeCCCHHH
Confidence 57899999999999999999999999999999999999999998 4999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCc-cccCCCCCCCCCccccccchh
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPNVSSETTVFDQSQ 160 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (435)
++++||++++|+++||++|.++.+++.++++.+++++++++................. ...+....... ......
T Consensus 3784 ~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 3859 (4334)
T PRK05691 3784 LGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEEVQ----AGEVAS 3859 (4334)
T ss_pred HHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecccc----cccccc
Confidence 9999999999999999999999999999999999999999987665433332221110 00000000000 000001
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEE
Q 013869 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (435)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~ 240 (435)
..+.....+++.+|++|||||||.||||.++|+++.+.+.+....+++.+.++++...+++|..+++ .++.++..|+++
T Consensus 3860 ~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~-~~~~~l~~G~~l 3938 (4334)
T PRK05691 3860 HNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVW-QFLAAPLFGARV 3938 (4334)
T ss_pred cCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHH-HHHHHHhCCCEE
Confidence 1122345689999999999999999999999999999999999999999999999999999999986 699999999999
Q ss_pred EEcCC---cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCH
Q 013869 241 EFMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (435)
Q Consensus 241 ~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~ 317 (435)
++++. .++..++.. +.++++|++..+|+++..++.. ....+++||.+++|||++++
T Consensus 3939 ~i~~~~~~~~~~~l~~~----------~~~~~vt~~~~~Ps~~~~l~~~-----------~~~~~~~lr~~~~gGe~l~~ 3997 (4334)
T PRK05691 3939 EIVPNAIAHDPQGLLAH----------VQAQGITVLESVPSLIQGMLAE-----------DRQALDGLRWMLPTGEAMPP 3997 (4334)
T ss_pred EEcCccccCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhh-----------ccccCCCceEEEecCCcCCH
Confidence 99875 355666666 6669999999999999988753 12346789999999999999
Q ss_pred HHHHHHHHHh-CCcccccccCccccchhccCC----CCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCcc
Q 013869 318 PVMQQWETIT-GHRLLERYGMTEFVMAISNPL----RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLF 391 (435)
Q Consensus 318 ~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~----~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~ 391 (435)
++.++|.+.+ +++++|.||.||++..++... .......++|+|++|+++.|+|++++.+|.+ .|||+|+|++++
T Consensus 3998 ~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~p~g~~GEL~i~G~~v~ 4077 (4334)
T PRK05691 3998 ELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDEALELVPLGAVGELCVAGTGVG 4077 (4334)
T ss_pred HHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECCCCCCCCCCCceEEEEeccccc
Confidence 9999998876 779999999999987554211 1112345799999999999999999998888 799999999999
Q ss_pred ccccCCchhccccccc-------CCccccCceEEEcCCccEEEecccccCC
Q 013869 392 KEYWKLPKVTKDSFTA-------DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 392 ~gy~~~~~~~~~~~~~-------~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+||+++|+.|+++|.. ++||+|||+|++++||.|+|+||+||+|
T Consensus 4078 ~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qv 4128 (4334)
T PRK05691 4078 RGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQV 4128 (4334)
T ss_pred ccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcE
Confidence 9999999999999843 5699999999999999999999999975
No 90
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-51 Score=411.70 Aligned_cols=387 Identities=21% Similarity=0.321 Sum_probs=312.5
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.+.|.+++. ++++|++..++++||+||+++++++|++|+++ .+++++++|+++++|++++
T Consensus 6 ~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~----------------~~~~~~~~V~i~~~n~~~~ 67 (529)
T PRK07867 6 TVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRAR----------------LDPTRPPHVGVLLDNTPEF 67 (529)
T ss_pred cHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHh----------------hCCCCCCEEEEECCCCHHH
Confidence 57788888886 78999999999999999999999999999984 3788999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhh
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
+++++||+++|++++|+++.++.+++.++++.+++++++++++..+.+..... ...+..+... ........ .....
T Consensus 68 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~l~~-~~~~~ 143 (529)
T PRK07867 68 SLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDP--GVRVINVDSP-AWADELAA-HRDAE 143 (529)
T ss_pred HHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhcc--CceEEEeccc-cHHHHhcc-cCCCC
Confidence 99999999999999999999999999999999999999999988776554321 1111111100 00000000 00011
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEE
Q 013869 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (435)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~ 241 (435)
.......++++++++|||||||.||+|.++|+++..+.......+++...|+++..+|++|..+++..++.++..|++++
T Consensus 144 ~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 223 (529)
T PRK07867 144 PPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIA 223 (529)
T ss_pred CCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEE
Confidence 11224567899999999999999999999999999988888888899999999999999999999877888999999999
Q ss_pred EcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHH
Q 013869 242 FMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQ 321 (435)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~ 321 (435)
+.+++++..+++. ++++++|++.++|+.+..++...+.. ....+++| +++||+.+++.+ +
T Consensus 224 ~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~ll~~~~~~--------~~~~~~lr-~~~gg~~~~~~~-~ 283 (529)
T PRK07867 224 LRRKFSASGFLPD----------VRRYGATYANYVGKPLSYVLATPERP--------DDADNPLR-IVYGNEGAPGDI-A 283 (529)
T ss_pred ecCCCCHHHHHHH----------HHHhCCeEEeccHHHHHHHHhCCCcc--------cccccceE-EEecCCCChHHH-H
Confidence 9999999998888 56689999999999999887653311 11235677 456888887664 6
Q ss_pred HHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEec-CCCCCCCC-c------------cceEEE-e
Q 013869 322 QWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAE-DESGSDAA-G------------VGEICV-K 386 (435)
Q Consensus 322 ~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~-~------------~Gel~v-~ 386 (435)
+|.+.++.++++.||+||+++.++... ....+++|.|+++ ++++| +++..++. . .|||++ +
T Consensus 284 ~~~~~~g~~l~~~YG~TE~~~~~~~~~--~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~ 359 (529)
T PRK07867 284 RFARRFGCVVVDGFGSTEGGVAITRTP--DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTA 359 (529)
T ss_pred HHHHHhCCcEEEeecccccccccccCC--CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEec
Confidence 788888999999999999986655322 2345689999999 56666 34444433 2 699999 9
Q ss_pred cCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 387 SPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 387 ~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|++++.||+++++.+.+.|. +|||+|||+|+++++|++++.||.+|+|
T Consensus 360 g~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i 407 (529)
T PRK07867 360 GPGGFEGYYNDPEADAERMR-GGVYWSGDLAYRDADGYAYFAGRLGDWM 407 (529)
T ss_pred CCcccccccCChHhhhhhhc-CCeEeeccEEEEeCCCcEEEeccccCeE
Confidence 99999999999999988884 8999999999999999999999999975
No 91
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-51 Score=418.70 Aligned_cols=394 Identities=23% Similarity=0.279 Sum_probs=312.6
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
.++.+.|.++++++|+++|++++++++||+||.++++++|.+|.+ .|+++|++|+++++|+++
T Consensus 37 ~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~-----------------~g~~~gd~V~i~~~n~~~ 99 (600)
T PRK08279 37 RSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAA-----------------RGVGKGDVVALLMENRPE 99 (600)
T ss_pred ccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCCCHH
Confidence 368899999999999999999999999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCc-cccCCCCCC---CCCcccc-
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPN---VSSETTV- 155 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~- 155 (435)
++++++||+++|++++|+++..+.+++.++++.+++++++++.+..+.+.......... ...+..... .......
T Consensus 100 ~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (600)
T PRK08279 100 YLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLA 179 (600)
T ss_pred HHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHh
Confidence 99999999999999999999999999999999999999999998877766554432221 111110000 0000000
Q ss_pred --ccchh---hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHH
Q 013869 156 --FDQSQ---AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (435)
Q Consensus 156 --~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~ 230 (435)
..... .........+++++++|||||||.||+|.++|+++.+++......+++.+.++++..+|++|..++...+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~ 259 (600)
T PRK08279 180 AAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAW 259 (600)
T ss_pred hhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHH
Confidence 00000 1112334678999999999999999999999999999999988889999999999999999999998777
Q ss_pred HHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEe
Q 013869 231 LAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMC 310 (435)
Q Consensus 231 ~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~ 310 (435)
+.++..|+++++.+.+++..+++. +.++++|++.++|+++..+++..... .....++|.+
T Consensus 260 ~~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~p~l~~~l~~~~~~~--------~~~~~~l~~~-- 319 (600)
T PRK08279 260 SSVLAAGATLALRRKFSASRFWDD----------VRRYRATAFQYIGELCRYLLNQPPKP--------TDRDHRLRLM-- 319 (600)
T ss_pred HHHHhcCcEEEEcCCCCHHHHHHH----------HHHhcceEEeehHHHHHHHHhCCCCc--------cccCcceeEE--
Confidence 888999999999999999988888 56689999999999999988753221 1133556653
Q ss_pred cCCCCCHHHHHHHHHHhCC-cccccccCccccchhccCCCCCCCCCccceecC----CCeE---------EEecCCCC--
Q 013869 311 GSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLRGARKAGTVGNPLP----GVQV---------KIAEDESG-- 374 (435)
Q Consensus 311 ~G~~l~~~l~~~~~~~~~~-~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~----~~~~---------~i~d~~~~-- 374 (435)
+|+.+++++++.|.+.++. .+++.||+||++..++.. .....++|.+.+ +..+ .+.+.++.
T Consensus 320 ~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 396 (600)
T PRK08279 320 IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV---FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCI 396 (600)
T ss_pred ecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc---CCCCcccccccccccccceeeeeccCcCceeeCCCCccc
Confidence 4788999999999999976 599999999988654432 224456776655 3332 23333332
Q ss_pred CCCCc-cceEE--EecCCccccccCCchhccccc------ccCCccccCceEEEcCCccEEEecccccCC
Q 013869 375 SDAAG-VGEIC--VKSPSLFKEYWKLPKVTKDSF------TADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 375 ~~~~~-~Gel~--v~~~~~~~gy~~~~~~~~~~~------~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
.++.+ .||++ ++++.++.|| ++++.+...| .+++||+|||+|++++||++++.||.||+|
T Consensus 397 ~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~i 465 (600)
T PRK08279 397 KVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTF 465 (600)
T ss_pred cCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeE
Confidence 23444 79998 7899999999 8888877665 236899999999999999999999999986
No 92
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=3.5e-51 Score=410.13 Aligned_cols=397 Identities=24% Similarity=0.403 Sum_probs=314.8
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.+.|.++++++|+++|++..++.+||.||.++++++|++|.+. |+++||+|+++++|++++
T Consensus 22 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~-----------------gi~~g~~V~i~~~~~~~~ 84 (541)
T TIGR03205 22 TLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRA-----------------GYGKDASVALYLGNTPDH 84 (541)
T ss_pred CHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCChHH
Confidence 578899999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhh--HHHHHHHHhcc-CCccccCCCCC--CC-------
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY--REVLQNVASKS-GAKFSLIPPVP--NV------- 149 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~-~~~~~~~~~~~--~~------- 149 (435)
+++++||+++|++++|+++..+.+++.++++.++++.+++++.. .+......... ...+....... ..
T Consensus 85 ~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (541)
T TIGR03205 85 PINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPI 164 (541)
T ss_pred HHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEeccccccccccccccc
Confidence 99999999999999999999999999999999999999998632 12221111110 01111111000 00
Q ss_pred CCc------ccccc-chhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc------cCCCCCeeEE
Q 013869 150 SSE------TTVFD-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW------EYTSADQFLH 216 (435)
Q Consensus 150 ~~~------~~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~------~~~~~~~~l~ 216 (435)
... ....+ ...........++++++++|||||||.||+|.++|+++....... ..+ .....+++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~ 243 (541)
T TIGR03205 165 PADPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVIC 243 (541)
T ss_pred CCCcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEE
Confidence 000 00000 000111224567899999999999999999999999987654422 211 2234578999
Q ss_pred eecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHH
Q 013869 217 CLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA 296 (435)
Q Consensus 217 ~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 296 (435)
..|++|..++...++.++..|+++++.+.+++..++.. |.++++|++.++|+++..+++...
T Consensus 244 ~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~-------- 305 (541)
T TIGR03205 244 VLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRD----------IEEKRATVFPGVPTMWIALANDPS-------- 305 (541)
T ss_pred eccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHH----------HHHcCCeEeechHHHHHHHHhCcc--------
Confidence 99999999987778899999999999988888888888 666999999999999999876421
Q ss_pred HhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCC-CCCCCCCccceecCCCeEEEe--cCCC
Q 013869 297 ASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKIA--EDES 373 (435)
Q Consensus 297 ~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~~~~~~~~~G~p~~~~~~~i~--d~~~ 373 (435)
.....++++|.+++||+++++++.+.+.+.++.++++.||+||++.+++... .....++++|.|++++.+++. |+++
T Consensus 306 ~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~ 385 (541)
T TIGR03205 306 LEKRDLSSLATIGSGGAPLPVEVANFFERKTGLKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPT 385 (541)
T ss_pred ccccCccccceEEEccccCCHHHHHHHHHHhCCCeecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCC
Confidence 1223567899999999999999999999988999999999999987655322 223346789999999998875 4556
Q ss_pred CCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 374 GSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 374 ~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+.++.+ .|||+++|+.++.||+++++.+.+.|. ++||+|||++++++||++++.||.+|+|
T Consensus 386 ~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~i~GR~~~~i 447 (541)
T TIGR03205 386 KVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFV-GDRFLTGDIGYMDTDGYFFLVDRKKDMI 447 (541)
T ss_pred ccCCCCCeeEEEEecCCccccccCChhhhHhhhc-cCCcccCceEEEcCCceEEEEccccCeE
Confidence 666655 799999999999999999999988885 6899999999999999999999999986
No 93
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-51 Score=412.57 Aligned_cols=399 Identities=24% Similarity=0.383 Sum_probs=319.8
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
++.+.|.++++++|+++|+++.++++||+||.++++++|.+|.+. .|+++|++|+++++|++++
T Consensus 24 ~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~----------------~g~~~g~~V~i~~~~~~~~ 87 (560)
T PRK08974 24 SLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNG----------------LGLKKGDRVALMMPNLLQY 87 (560)
T ss_pred cHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 578899999999999999999999999999999999999999842 3999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCC-CCCCC---------
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPV-PNVSS--------- 151 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------- 151 (435)
+++++||+++|++++|+++.++.+++.+++++++++.++++++..+.+................. .....
T Consensus 88 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (560)
T PRK08974 88 PIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFV 167 (560)
T ss_pred HHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccch
Confidence 99999999999999999999999999999999999999998876665555433221111110000 00000
Q ss_pred ------------cccccc---c-----hhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhcc---C
Q 013869 152 ------------ETTVFD---Q-----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---Y 208 (435)
Q Consensus 152 ------------~~~~~~---~-----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~---~ 208 (435)
...... . ...........+++++++|||||||.||+|.++|.++..++......+. .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~ 247 (560)
T PRK08974 168 VKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLH 247 (560)
T ss_pred hhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccC
Confidence 000000 0 0001112346789999999999999999999999999877655443332 2
Q ss_pred CCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC-CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhh
Q 013869 209 TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGY 287 (435)
Q Consensus 209 ~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 287 (435)
...+.++..+|++|.+++...++.++..|+++++.. ..++..++.. +.++++|++.++|+++..+++..
T Consensus 248 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~ 317 (560)
T PRK08974 248 PGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKE----------LKKYPFTAITGVNTLFNALLNNE 317 (560)
T ss_pred CCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHH----------HHhcCcceEcCcHHHHHHHHhCc
Confidence 345678899999999987666778888999877654 4566677776 66699999999999999998753
Q ss_pred ccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCC-CCCCCCccceecCCCeE
Q 013869 288 EAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQV 366 (435)
Q Consensus 288 ~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~~~G~p~~~~~~ 366 (435)
. .....++++|.+++||++++..+.+.|++.++.++++.||+||++.+++.... ......++|.|++++++
T Consensus 318 ~--------~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 389 (560)
T PRK08974 318 E--------FQELDFSSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEI 389 (560)
T ss_pred C--------cccCCccceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccccCceeeccCCCCcccCCccccCcCCCEE
Confidence 2 12235678999999999999999999999999999999999999866553322 22446789999999999
Q ss_pred EEecCCCCCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 367 KIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 367 ~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+++|+++..++.+ .|||+++|+.++.||+++++.+...| .+|||+|||+|+++++|++++.||.+|+|
T Consensus 390 ~i~~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~i~GR~~d~i 458 (560)
T PRK08974 390 KLVDDDGNEVPPGEPGELWVKGPQVMLGYWQRPEATDEVI-KDGWLATGDIAVMDEEGFLRIVDRKKDMI 458 (560)
T ss_pred EEECCCCCCCCCCCceEEEEecCCcchhhcCChhhhhhhh-hcCCcccCCEEEEcCCceEEEEecccceE
Confidence 9999888887776 79999999999999999999988888 58999999999999999999999999975
No 94
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-51 Score=411.88 Aligned_cols=394 Identities=20% Similarity=0.292 Sum_probs=312.3
Q ss_pred hHHHHHHHhcccCCCeeEEEeC----CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCC
Q 013869 2 EVFKAAYKKGSMARDSVAIRAD----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~ 77 (435)
++.++|.+.++.+|++.++.+. .+.+||.||.++++++|.+|.+. |+++||+|+++++|
T Consensus 11 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-----------------g~~~~d~v~i~~~~ 73 (539)
T PRK07008 11 LISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAAL-----------------GVEPGDRVGTLAWN 73 (539)
T ss_pred CHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcCC
Confidence 4677899999999999888752 26899999999999999999994 99999999999999
Q ss_pred CHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCcc--ccCCCCCCCCC----
Q 013869 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKF--SLIPPVPNVSS---- 151 (435)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---- 151 (435)
+++++++++||+++|++++|+++.++.+++.++++.++++++++++++.+.+.+......... ..+........
T Consensus 74 ~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (539)
T PRK07008 74 GYRHLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTP 153 (539)
T ss_pred cHHHHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcc
Confidence 999999999999999999999999999999999999999999999988776655543322111 00100000000
Q ss_pred cc---cc-ccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHH--HHHHhccCCCCCeeEEeecchhhhH
Q 013869 152 ET---TV-FDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQ--MLTEAWEYTSADQFLHCLPLHHVHG 225 (435)
Q Consensus 152 ~~---~~-~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~--~~~~~~~~~~~~~~l~~~pl~~~~g 225 (435)
.. .. .............++++++++|||||||.||+|.+||++++.+.. .....+++..+++++...|++|..+
T Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~ 233 (539)
T PRK07008 154 LLCYETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNA 233 (539)
T ss_pred cccHHHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhh
Confidence 00 00 000001112245678899999999999999999999999865432 2334567788999999999999887
Q ss_pred HHHHHHHHHHcCCEEEEcC-CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccc
Q 013869 226 LFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQ 304 (435)
Q Consensus 226 ~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~ 304 (435)
+. .++.++..|+++++.+ .+++..+++. ++++++|++.++|+++..+++..+. ....+++
T Consensus 234 ~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~----------l~~~~vt~~~~~P~~~~~l~~~~~~--------~~~~~~~ 294 (539)
T PRK07008 234 WG-LPYSAPLTGAKLVLPGPDLDGKSLYEL----------IEAERVTFSAGVPTVWLGLLNHMRE--------AGLRFST 294 (539)
T ss_pred HH-HHHHHHhcCceEEEecCCcCHHHHHHH----------HHHcCCEEEEechHHHHHHHhcccc--------cCCCccc
Confidence 64 3678899999999874 5677888777 6669999999999999999876432 1235789
Q ss_pred cEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCC-----------CCCCCccceecCCCeEEEecCCC
Q 013869 305 LRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG-----------ARKAGTVGNPLPGVQVKIAEDES 373 (435)
Q Consensus 305 lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~p~~~~~~~i~d~~~ 373 (435)
+|.++++|+++++++.+.|.+.++.++++.||+||++..++..... .....++|+|+|+++++|+|+++
T Consensus 295 l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~ 374 (539)
T PRK07008 295 LRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDG 374 (539)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHhCCceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCC
Confidence 9999999999999999999999999999999999998654422110 11246789999999999999888
Q ss_pred CCCCC---ccceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 374 GSDAA---GVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 374 ~~~~~---~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
...+. ..|||+++|+.++.||++++. ..+. +|||+|||+|++++||++++.||.+|+|
T Consensus 375 ~~~~~~~~~~Gei~v~g~~~~~gy~~~~~---~~~~-~g~~~TGD~~~~~~dg~l~~~GR~~d~i 435 (539)
T PRK07008 375 RELPWDGKAFGDLQVRGPWVIDRYFRGDA---SPLV-DGWFPTGDVATIDADGFMQITDRSKDVI 435 (539)
T ss_pred CccCCCCCcceEEEEeCCccchhhcCChh---hhhc-CCCcccCceEEEcCCCcEEEeecccCEE
Confidence 77653 269999999999999999883 3343 6899999999999999999999999975
No 95
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=3.8e-51 Score=406.86 Aligned_cols=387 Identities=21% Similarity=0.305 Sum_probs=319.8
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
|++.+.|.++++.+|+++|++..+..+||+||.++++++|.+|.+. |+.+|++|+++++|+.+
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~-----------------g~~~~~~v~~~~~~~~~ 64 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSL-----------------KLPDKSPIIVFGHMSPE 64 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEcCCCHH
Confidence 7899999999999999999999999999999999999999999995 89999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchh
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
++++++||+++|++++|+++..+.+++.++++..++++++++.+.... ......+ ....... .......
T Consensus 65 ~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~--~~~~~~~ 133 (503)
T PRK04813 65 MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLE--------ILGIPVI-TLDELKD--IFATGNP 133 (503)
T ss_pred HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEeccccccc--------ccCCcEE-ehHHhhh--hhhcccc
Confidence 999999999999999999999999999999999999999998765110 0000000 0000000 0000001
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEE
Q 013869 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (435)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~ 240 (435)
........++++++++|||||||.||+|.++|+++.....+....+.+...++++...|++|..++. .++.++..|+++
T Consensus 134 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~ 212 (503)
T PRK04813 134 YDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVM-DLYPTLASGGTL 212 (503)
T ss_pred ccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHH-HHHHHHhcCCEE
Confidence 1112245678899999999999999999999999999888888888899999999999999999875 588999999999
Q ss_pred EEcCCc---chhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCH
Q 013869 241 EFMPKF---SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (435)
Q Consensus 241 ~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~ 317 (435)
++.++. ++..+++. +.++++|++..+|+++..++... ......++++|.++++|+++++
T Consensus 213 v~~~~~~~~~~~~~~~~----------~~~~~~t~~~~~p~~~~~~~~~~--------~~~~~~~~~l~~i~~~G~~l~~ 274 (503)
T PRK04813 213 VALPKDMTANFKQLFET----------LPQLPINVWVSTPSFADMCLLDP--------SFNEEHLPNLTHFLFCGEELPH 274 (503)
T ss_pred EEcChhhhcCHHHHHHH----------HHHcCCeEEEeChHHHHHHHHhh--------ccCcccCCCceEEEEecCcCCH
Confidence 998863 55666666 56689999999999998876532 1223457889999999999999
Q ss_pred HHHHHHHHHh-CCcccccccCccccchhccC-----CCCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCc
Q 013869 318 PVMQQWETIT-GHRLLERYGMTEFVMAISNP-----LRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSL 390 (435)
Q Consensus 318 ~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~-----~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~ 390 (435)
.+.+.|.+.+ +.++++.||+||++..++.. ........++|+|.++++++|+|+++...+.+ .|||+++|+.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~ 354 (503)
T PRK04813 275 KTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQGEIVISGPSV 354 (503)
T ss_pred HHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCceEEEEecccc
Confidence 9999999998 78999999999987544321 11124456799999999999999988887766 79999999999
Q ss_pred cccccCCchhcccccc---cCCccccCceEEEcCCccEEEecccccCC
Q 013869 391 FKEYWKLPKVTKDSFT---ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 391 ~~gy~~~~~~~~~~~~---~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+.||+++++.+...|. +.+||+|||+|++ ++|++++.||.+|+|
T Consensus 355 ~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i 401 (503)
T PRK04813 355 SKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQI 401 (503)
T ss_pred ccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceE
Confidence 9999999999988763 2359999999999 999999999999975
No 96
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-51 Score=377.74 Aligned_cols=412 Identities=23% Similarity=0.322 Sum_probs=324.4
Q ss_pred hHHHHHHHhcccCCCeeEEEe-----------------------CCcccCHHHHHHHHHHHHHHHhhCCCCCcccccccc
Q 013869 2 EVFKAAYKKGSMARDSVAIRA-----------------------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNE 58 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~-----------------------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~ 58 (435)
|+.+.|.+.++.+.++.++=. +-..+||.|+..++..+|+.|.+
T Consensus 42 Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~------------- 108 (678)
T KOG1180|consen 42 TLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVK------------- 108 (678)
T ss_pred cHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHH-------------
Confidence 567888888888888888742 12479999999999999999999
Q ss_pred ccccccCCCCCe-EEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccC
Q 013869 59 NSAVLAGGCGAR-IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG 137 (435)
Q Consensus 59 ~~~~~g~~~g~~-V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~ 137 (435)
.|++++++ |+|+++.+.+|+.+++||++.+.++|.+...+.++.+.|-|+++++..+|++.+..+.+....+...
T Consensus 109 ----lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~ 184 (678)
T KOG1180|consen 109 ----LGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAK 184 (678)
T ss_pred ----hCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccC
Confidence 59997777 9999999999999999999999999999999999999999999999999999999987766654433
Q ss_pred C--ccccCCCCCCCCCccc-------------------cccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHH
Q 013869 138 A--KFSLIPPVPNVSSETT-------------------VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSID 196 (435)
Q Consensus 138 ~--~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~ 196 (435)
. .++.+.+++....... ...... .++.+..++|+|+|+|||||||.||||+++|+|++
T Consensus 185 ~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~-~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiV 263 (678)
T KOG1180|consen 185 TVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE-IPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIV 263 (678)
T ss_pred ceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC-CCCCCCCCCceEEEEEcCCCCCCCceEEEecccHH
Confidence 2 1222222111111000 001111 12344578999999999999999999999999999
Q ss_pred HHHHHHHHhc-cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceecc
Q 013869 197 AQVQMLTEAW-EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTG 275 (435)
Q Consensus 197 ~~~~~~~~~~-~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 275 (435)
+.+....... .+.+.|+++.++||.|+..+.+ =+.+++.|+.+-..++.+..+.-.-+.+. -++=+...|||.+.+
T Consensus 264 A~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~a-E~~~ft~G~~iGY~S~~TLtdts~ki~kg--~kGD~~~lkPTiM~~ 340 (678)
T KOG1180|consen 264 AGVTGVGENVPELGPKDRYIAYLPLAHILELTA-ELVCFTWGGRIGYSSPLTLTDTSSKIKKG--CKGDLTELKPTIMAA 340 (678)
T ss_pred hhhhhhcccCcccCCCceEEEechHHHHHHHHH-HHHHHhhCCEeecCCcceecccchhhccC--CcCccccccchhhhh
Confidence 9998887766 6889999999999999999986 45579999999887765443332222111 112266789999999
Q ss_pred ccHHHHHHHhhhc----cccHHHHH------------------------------HhhhhccccEEEEecCCCCCHHHHH
Q 013869 276 VPTMYTRLIQGYE----AMDTELQA------------------------------ASASAAKQLRLMMCGSSALPLPVMQ 321 (435)
Q Consensus 276 ~P~~~~~l~~~~~----~~~~~~~~------------------------------~~~~~l~~lr~i~~~G~~l~~~l~~ 321 (435)
+|..++++.+..- .++.-... .+.-....+|.+++||++++++..+
T Consensus 341 VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQr 420 (678)
T KOG1180|consen 341 VPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQR 420 (678)
T ss_pred hHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHH
Confidence 9999998876521 11110000 0111235899999999999999999
Q ss_pred HHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEec--CCCCCCCCc--cceEEEecCCccccccCC
Q 013869 322 QWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAE--DESGSDAAG--VGEICVKSPSLFKEYWKL 397 (435)
Q Consensus 322 ~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d--~~~~~~~~~--~Gel~v~~~~~~~gy~~~ 397 (435)
++.-.+.+++.+.||.||++...+.........+.+|.|++.++++++| +.|....+. .||||++|+.++.||+++
T Consensus 421 F~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn 500 (678)
T KOG1180|consen 421 FMNICFCCPVLQGYGLTETCAAATVLEPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKN 500 (678)
T ss_pred HHHHhccccccccccccchhcccEecChhhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCC
Confidence 9999999999999999998776665444556777999999999999999 445444333 799999999999999999
Q ss_pred chhccccccc-CC--ccccCceEEEcCCccEEEecccccC
Q 013869 398 PKVTKDSFTA-DG--FFKTGDTGKQDEDGYYIILGRKGIY 434 (435)
Q Consensus 398 ~~~~~~~~~~-~g--~~~TGD~g~~~~dG~l~~~gR~~d~ 434 (435)
++.|++.|+. +| ||+|||+|++.+||.|.+++|++|+
T Consensus 501 ~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdL 540 (678)
T KOG1180|consen 501 EEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDL 540 (678)
T ss_pred hhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhh
Confidence 9999999987 88 9999999999999999999999996
No 97
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=4.9e-51 Score=442.05 Aligned_cols=393 Identities=22% Similarity=0.351 Sum_probs=313.1
Q ss_pred hHHHHHHHhcccCC-CeeEEEe-CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH
Q 013869 2 EVFKAAYKKGSMAR-DSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (435)
Q Consensus 2 ~i~~~~~~~~~~~p-~~~al~~-~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~ 79 (435)
++.+.|.++++++| +++|+.+ +++++||+||+++++++|++|++ |+++||+|+++++|++
T Consensus 632 ~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~------------------g~~~gd~V~i~~~n~~ 693 (1140)
T PRK06814 632 TLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK------------------NTPPGENVGVMLPNAN 693 (1140)
T ss_pred CHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh------------------cCCCCCeEEEEcCCch
Confidence 46677888888876 6788776 47899999999999999999975 8899999999999999
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHH--HHHhccCC--ccccCCCCCC-CCCccc
Q 013869 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ--NVASKSGA--KFSLIPPVPN-VSSETT 154 (435)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~-~~~~~~ 154 (435)
+++++++||+++|++++|+|+..+.+++.++++++++++++++++..+... ........ .+..+..... ......
T Consensus 694 ~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 773 (1140)
T PRK06814 694 GAAVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADK 773 (1140)
T ss_pred HHHHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHH
Confidence 999999999999999999999999999999999999999999987654321 11111111 1111111000 000000
Q ss_pred ccc----chhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHH
Q 013869 155 VFD----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (435)
Q Consensus 155 ~~~----~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~ 230 (435)
..+ ..+........++|+++++|||||||.||+|.++|+++.++.......+++.++|++++.+|++|..++...+
T Consensus 774 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 853 (1140)
T PRK06814 774 IKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGL 853 (1140)
T ss_pred HHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHH
Confidence 000 0000011135679999999999999999999999999999998888888999999999999999999987788
Q ss_pred HHHHHcCCEEEEcCC-cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEE
Q 013869 231 LAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (435)
Q Consensus 231 ~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~ 309 (435)
+.++..|+++++.+. .+.....+. +.++++|++..+|+++..+.+.. ...+++++|.++
T Consensus 854 ~~~l~~G~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~l~~l~~~~----------~~~~~~~lr~v~ 913 (1140)
T PRK06814 854 VLPLLSGVKVFLYPSPLHYRIIPEL----------IYDTNATILFGTDTFLNGYARYA----------HPYDFRSLRYVF 913 (1140)
T ss_pred HHHHHcCCEEEEecCcccHHHHHHH----------HHhcCCEEEEecHHHHHHHHhhc----------ccccccceeEEE
Confidence 999999999998874 444555555 66799999999999999887631 224578899999
Q ss_pred ecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCccceEEEecCC
Q 013869 310 CGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPS 389 (435)
Q Consensus 310 ~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~~Gel~v~~~~ 389 (435)
+||+++++++.+.|.+.++.++++.||+||++..++.......+..++|+|.|++++++.+.++ .++.|||+++|++
T Consensus 914 ~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~g~~~~~~~~~~---~~~~Gel~v~g~~ 990 (1140)
T PRK06814 914 AGAEKVKEETRQTWMEKFGIRILEGYGVTETAPVIALNTPMHNKAGTVGRLLPGIEYRLEPVPG---IDEGGRLFVRGPN 990 (1140)
T ss_pred EcCCcCCHHHHHHHHHHhCCcEEeccccccccceEEecCCCCCCCCcCCccCCCCeEEEeecCC---CCCceEEEEeCCC
Confidence 9999999999999999999999999999999876554433345677999999999999987653 2346999999999
Q ss_pred ccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 390 LFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 390 ~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++.||+++++........+|||+|||+|++|+||++++.||.||+|
T Consensus 991 ~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i 1036 (1140)
T PRK06814 991 VMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFA 1036 (1140)
T ss_pred cchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCee
Confidence 9999998765433222358999999999999999999999999986
No 98
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.2e-51 Score=404.75 Aligned_cols=390 Identities=20% Similarity=0.250 Sum_probs=304.2
Q ss_pred HHhcccCCCeeEEEe--CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHH
Q 013869 8 YKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (435)
Q Consensus 8 ~~~~~~~p~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~ 85 (435)
-.+|+++|+++|++. +++++||+||.++++++|+.|.++ |+++||+|+++++|++++++++
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~-----------------gv~~gd~V~i~~~n~~~~~~~~ 66 (501)
T PRK13390 4 GTHAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDA-----------------GLRTGDVVALLSDNSPEALVVL 66 (501)
T ss_pred chhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHHHHHH
Confidence 356788999999986 368999999999999999999994 9999999999999999999999
Q ss_pred HHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhhhhcc
Q 013869 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMD 165 (435)
Q Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (435)
|||+++|++++|+++.++.+++.++++.+++++++++.................+ .+.. ..................
T Consensus 67 la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~ 143 (501)
T PRK13390 67 WAALRSGLYITAINHHLTAPEADYIVGDSGARVLVASAALDGLAAKVGADLPLRL-SFGG--EIDGFGSFEAALAGAGPR 143 (501)
T ss_pred HHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEE-EecC--cccccccHHHHhcccCCC
Confidence 9999999999999999999999999999999999998765443333222111000 0000 000000000000000001
Q ss_pred CCCCCCcEEEEecCCCCCCCceEEee--hHHHHHHH----HHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCE
Q 013869 166 GQRGEDPALIVYTSGTTGKPKGVVHT--HKSIDAQV----QMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (435)
Q Consensus 166 ~~~~~~~~~i~~TSGtTG~pK~v~~t--~~~l~~~~----~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (435)
.....+.++++|||||||.||+|.++ |.++.... ......+.+..+++++..+|++|..++.. .+..+..|++
T Consensus 144 ~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~-~~~~~~~g~~ 222 (501)
T PRK13390 144 LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRW-CSMVHALGGT 222 (501)
T ss_pred CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHH-HHHHHhcCce
Confidence 11223579999999999999999964 55544321 11233457888999999999999998754 4446778999
Q ss_pred EEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHH
Q 013869 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (435)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l 319 (435)
+++.+.+++..++.. ++++++|++.++|+++..+++..... .....++++|.++.+|++++.++
T Consensus 223 ~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~------~~~~~~~~l~~v~~~g~~~~~~~ 286 (501)
T PRK13390 223 VVLAKRFDAQATLGH----------VERYRITVTQMVPTMFVRLLKLDADV------RTRYDVSSLRAVIHAAAPCPVDV 286 (501)
T ss_pred EEEcCCcCHHHHHHH----------HHHcCCeEEEecHHHHHHHHhccchh------cccCChhhhheEEEcCCCCCHHH
Confidence 999999998888888 66699999999999999987642111 12234678999999999999999
Q ss_pred HHHHHHHhCCcccccccCccccchhccCC-CCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccccCC
Q 013869 320 MQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKL 397 (435)
Q Consensus 320 ~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~ 397 (435)
.+.+.+.++.++++.||+||++.++.... ......+++|+|+++ +++|+|+++..++.+ .|||+++|+.++.||+++
T Consensus 287 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~ 365 (501)
T PRK13390 287 KHAMIDWLGPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICDDDGNELPAGRIGTVYFERDRLPFRYLND 365 (501)
T ss_pred HHHHHHhcCCceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEecCCccccccCC
Confidence 99999999999999999999976544322 223456789999999 799999988887666 799999999999999999
Q ss_pred chhccccccc--CCccccCceEEEcCCccEEEecccccCC
Q 013869 398 PKVTKDSFTA--DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 398 ~~~~~~~~~~--~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++.+.+.+.. ++|++|||+|++|+||++++.||.||+|
T Consensus 366 ~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i 405 (501)
T PRK13390 366 PEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMI 405 (501)
T ss_pred hhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccce
Confidence 9999888754 5799999999999999999999999986
No 99
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.2e-51 Score=412.11 Aligned_cols=394 Identities=21% Similarity=0.318 Sum_probs=298.7
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCC---------cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeE
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQ---------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARI 71 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~---------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V 71 (435)
|++.+.|.+++..+|+++|+++.+ +++||+||.++++++|++|.+. | .+||+|
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~-----------------g-~~gd~V 62 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRH-----------------G-STGDRA 62 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHh-----------------C-CCCCEE
Confidence 789999999999999999998632 6899999999999999999984 7 589999
Q ss_pred EEEeCCCHHHHHHHHHHHHhCCeEEeCCC---CCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC-ccccCCCCC
Q 013869 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLAL---SYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-KFSLIPPVP 147 (435)
Q Consensus 72 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 147 (435)
+++++|+++++++++||+++|++++|+++ ..+.+++.++++.+++++++++++..+.+......... ....+...+
T Consensus 63 ~l~~~n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (578)
T PRK05850 63 VILAPQGLEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVD 142 (578)
T ss_pred EEEcCCcccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeec
Confidence 99999999999999999999999999997 45788999999999999999999887766543221110 000000000
Q ss_pred CCCCccccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc-c-----CCCCCeeEEeecch
Q 013869 148 NVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW-E-----YTSADQFLHCLPLH 221 (435)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~-----~~~~~~~l~~~pl~ 221 (435)
..... . ..........++++++++|||||||.||+|.++|+++..++......+ . ....+++++++|++
T Consensus 143 ~~~~~----~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 217 (578)
T PRK05850 143 LLDLD----S-PRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFY 217 (578)
T ss_pred ccccc----c-CCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCC
Confidence 00000 0 000112234678999999999999999999999999988776655432 2 34578999999999
Q ss_pred hhhHHHHHHHHHHHcCCEEEEcCCc----chhHHHHHHHhhcCCCCCccccccceeccccHHHHHHH-hhhccccHHHHH
Q 013869 222 HVHGLFNALLAPLYAGATVEFMPKF----SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLI-QGYEAMDTELQA 296 (435)
Q Consensus 222 ~~~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~-~~~~~~~~~~~~ 296 (435)
|..|++..++.++..|+++++.++. ++..++.. +.+++++.+ .+|..+..++ ...+. ..
T Consensus 218 h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~----------i~~~~~~~~-~~p~~~~~~~~~~~~~-----~~ 281 (578)
T PRK05850 218 HDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQL----------LASNPHAFS-AAPNFAFELAVRKTSD-----DD 281 (578)
T ss_pred CCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHH----------HHHcCCeEE-eCCcHHHHHHHHhcch-----hh
Confidence 9999887899999999999998754 45555555 666888865 5565544433 21110 01
Q ss_pred HhhhhccccEEEEecCCCCCHHHHHHHHHHhC------CcccccccCccccchhccCCCCC-------------------
Q 013869 297 ASASAAKQLRLMMCGSSALPLPVMQQWETITG------HRLLERYGMTEFVMAISNPLRGA------------------- 351 (435)
Q Consensus 297 ~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~------~~l~~~YG~tE~~~~~~~~~~~~------------------- 351 (435)
....+++++|.++.||+++++++.++|.+.|+ ..+++.||+||++..+.......
T Consensus 282 ~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 361 (578)
T PRK05850 282 MAGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKR 361 (578)
T ss_pred hcCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEe
Confidence 12235678999999999999999999999873 36899999999875433211100
Q ss_pred ------CCCCccceecCCCeEEEecCC-CCCCCCc-cceEEEecCCccccccCCchhccccccc-----------CCccc
Q 013869 352 ------RKAGTVGNPLPGVQVKIAEDE-SGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTA-----------DGFFK 412 (435)
Q Consensus 352 ------~~~~~~G~p~~~~~~~i~d~~-~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~-----------~g~~~ 412 (435)
....++|.|. +++++++|++ +..++.+ .||||++|+.++.||+++++.+.+.|+. +|||+
T Consensus 362 ~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~ 440 (578)
T PRK05850 362 CETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLR 440 (578)
T ss_pred cCCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeee
Confidence 0011344443 5789999854 5556655 7999999999999999999999988842 57999
Q ss_pred cCceEEEcCCccEEEecccccCC
Q 013869 413 TGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 413 TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
|||+|+++ ||++++.||++|+|
T Consensus 441 TGDl~~~~-~G~l~~~GR~~d~i 462 (578)
T PRK05850 441 TGDLGFIS-EGELFIVGRIKDLL 462 (578)
T ss_pred ccceeeEE-CCEEEEEcccccEE
Confidence 99999997 89999999999986
No 100
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.8e-51 Score=484.87 Aligned_cols=386 Identities=23% Similarity=0.353 Sum_probs=327.0
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
+++++|.++++++|+++|+++.++++||+||.++++++|++|.++ |+++|++|++++++++++
T Consensus 1132 ~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~-----------------gv~~g~~V~i~~~~s~~~ 1194 (4334)
T PRK05691 1132 WLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDK-----------------GVGPDVCVAIAAERSPQL 1194 (4334)
T ss_pred CHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 578999999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhh
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
++++||++++|++++|+++.++.+++.++++.+++++++++......+.... ......+. .... ......
T Consensus 1195 iv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~---~~~~----~~~~~~ 1264 (4334)
T PRK05691 1195 LVGLLAILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAE---GVSAIALD---SLHL----DSWPSQ 1264 (4334)
T ss_pred HHHHHHHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhccccc---CceEEeec---cccc----cccCCC
Confidence 9999999999999999999999999999999999999999987654432210 00000000 0000 000011
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEE
Q 013869 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (435)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~ 241 (435)
.+.....++++++++|||||||.||||.++|+++.+.+.+....+++.++++++...|++|..+++ .++.++..|++++
T Consensus 1265 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~-~~~~~L~~G~~l~ 1343 (4334)
T PRK05691 1265 APGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVW-ECFWPLITGCRLV 1343 (4334)
T ss_pred CCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHH-HHHHHHhCCCEEE
Confidence 112244678999999999999999999999999999999988899999999999999999999886 6999999999999
Q ss_pred EcCC---cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHH
Q 013869 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (435)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~ 318 (435)
+.+. .++..++.. +.++++|++.++|++++.+.+... ...++++|.+++||++++++
T Consensus 1344 i~~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~l~~l~~~~~----------~~~~~~lr~~~~gGe~l~~~ 1403 (4334)
T PRK05691 1344 LAGPGEHRDPQRIAEL----------VQQYGVTTLHFVPPLLQLFIDEPL----------AAACTSLRRLFSGGEALPAE 1403 (4334)
T ss_pred EcCccccCCHHHHHHH----------HHHcCCeEEECcHHHHHHHHhCcc----------cccCCcccEEEEeecCCCHH
Confidence 9864 566677777 666999999999999999876321 23578999999999999999
Q ss_pred HHHHHHHHh-CCcccccccCccccchhccC--CCCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccc
Q 013869 319 VMQQWETIT-GHRLLERYGMTEFVMAISNP--LRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEY 394 (435)
Q Consensus 319 l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~--~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy 394 (435)
+.+.|.+.+ +.+++|.||.||+++.++.. ........++|+|+++++++|+|++++.++.+ .|||+|+|+++++||
T Consensus 1404 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~G~~GEL~i~G~~v~~GY 1483 (4334)
T PRK05691 1404 LRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLDAELNLLPPGVAGELCIGGAGLARGY 1483 (4334)
T ss_pred HHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEECCCCCCCCCCCceEEEecCcccchhh
Confidence 999999987 67999999999998665521 12234567899999999999999999988877 799999999999999
Q ss_pred cCCchhccccccc-------CCccccCceEEEcCCccEEEecccccCC
Q 013869 395 WKLPKVTKDSFTA-------DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 395 ~~~~~~~~~~~~~-------~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+++|+.|.+.|.. .+||+|||+|++++||.++++||+||+|
T Consensus 1484 l~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qi 1531 (4334)
T PRK05691 1484 LGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQV 1531 (4334)
T ss_pred cCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEE
Confidence 9999999998843 3599999999999999999999999975
No 101
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.1e-51 Score=407.40 Aligned_cols=395 Identities=21% Similarity=0.332 Sum_probs=313.2
Q ss_pred ChHHHHHHHhcccCCCeeEEEe--C--CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeC
Q 013869 1 MEVFKAAYKKGSMARDSVAIRA--D--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~--~--~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~ 76 (435)
+++.++|.++++++||+++++. + .+++||+||.++++++|++|.+. |+++||+|+++++
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~-----------------g~~~gd~v~i~~~ 72 (542)
T PRK06018 10 LLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRD-----------------GIKLGDRVATIAW 72 (542)
T ss_pred CCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcC
Confidence 5788999999999999999984 2 36899999999999999999994 9999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC--ccccCCCCCCCCCcc-
Q 013869 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPNVSSET- 153 (435)
Q Consensus 77 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~- 153 (435)
|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.++.+.+.+....... .+..+..........
T Consensus 73 ~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (542)
T PRK06018 73 NTWRHLEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTL 152 (542)
T ss_pred CchHHHHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCc
Confidence 99999999999999999999999999999999999999999999999888777665443321 111111110000000
Q ss_pred ----ccc----cchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHH-H-HHHHHHHhccCCCCCeeEEeecchhh
Q 013869 154 ----TVF----DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSID-A-QVQMLTEAWEYTSADQFLHCLPLHHV 223 (435)
Q Consensus 154 ----~~~----~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~-~-~~~~~~~~~~~~~~~~~l~~~pl~~~ 223 (435)
... ............++++++++|||||||.||+|.+||++.+ . ........+++..+++++...|++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~ 232 (542)
T PRK06018 153 KNAVAYEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHA 232 (542)
T ss_pred cccccHHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHH
Confidence 000 0000111123466889999999999999999999999743 2 22333456678899999999999999
Q ss_pred hHHHHHHHHHHHcCCEEEEcC-CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhc
Q 013869 224 HGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAA 302 (435)
Q Consensus 224 ~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l 302 (435)
.++.. .+.++..|+++++.. .+++..+++. ++++++|++.++|+++..+++..+.. ..++
T Consensus 233 ~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~~~~l~~~~~~~--------~~~~ 293 (542)
T PRK06018 233 NSWGI-AFSAPSMGTKLVMPGAKLDGASVYEL----------LDTEKVTFTAGVPTVWLMLLQYMEKE--------GLKL 293 (542)
T ss_pred hhhHH-HHhhhhcCceEEccCcCCCHHHHHHH----------HHhcCCceeecCcHHHHHHHhccccc--------CCCc
Confidence 88764 567889999998874 5677777777 56689999999999999998754322 2356
Q ss_pred cccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCC-C-C---------CCCCCccceecCCCeEEEecC
Q 013869 303 KQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-R-G---------ARKAGTVGNPLPGVQVKIAED 371 (435)
Q Consensus 303 ~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~-~---------~~~~~~~G~p~~~~~~~i~d~ 371 (435)
+++|.++++|+++++++++.|++ ++.++++.||+||++.+++... . . .....++|+|.++++++|+|+
T Consensus 294 ~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~ 372 (542)
T PRK06018 294 PHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDD 372 (542)
T ss_pred ccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECC
Confidence 78999999999999999999999 8999999999999986544211 0 0 012357899999999999999
Q ss_pred CCCCCCC---ccceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 372 ESGSDAA---GVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 372 ~~~~~~~---~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++...+. ..|||+++|+.++.||+++ +...++.+|||+|||+|++++||++++.||.+|+|
T Consensus 373 ~~~~~~~~~~~~Gel~i~g~~~~~gy~~~---~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i 436 (542)
T PRK06018 373 AGKELPWDGKTFGRLKVRGPAVAAAYYRV---DGEILDDDGFFDTGDVATIDAYGYMRITDRSKDVI 436 (542)
T ss_pred CCCCCCCCCCceeEEEEecCCcchhhhcC---cccEecCCcEEEcCCEEEEcCCccEEEEecCCCeE
Confidence 8877653 2699999999999999983 23445668999999999999999999999999975
No 102
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=5.6e-50 Score=403.18 Aligned_cols=398 Identities=18% Similarity=0.282 Sum_probs=308.4
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+|+...|.+.+..+|+++|+++.+..+||+||.++++++|.+|.+ .|+++||+|+++++|+++
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~-----------------~g~~~gd~V~i~~~n~~~ 82 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAK-----------------RSIGPGSTVAVIAPNIPA 82 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCcHH
Confidence 357788899999999999999998999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccC---------CccccCCCCCC---
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG---------AKFSLIPPVPN--- 148 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~--- 148 (435)
++++++||+++|++++|+++.++.+++.++++.++++.+++++++.+.......... ..+..+.....
T Consensus 83 ~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (567)
T PLN02479 83 MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPK 162 (567)
T ss_pred HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCcc
Confidence 999999999999999999999999999999999999999999987665544322111 01111110000
Q ss_pred -CC-----Ccccccc---c-hhh-hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEe
Q 013869 149 -VS-----SETTVFD---Q-SQA-EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHC 217 (435)
Q Consensus 149 -~~-----~~~~~~~---~-~~~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~ 217 (435)
.. ......+ . ... ........++.++++|||||||.||+|.++|+++..........+++..+++++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (567)
T PLN02479 163 SLQYALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWT 242 (567)
T ss_pred ccccccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEe
Confidence 00 0000000 0 000 00112234567889999999999999999999987766666667788899999999
Q ss_pred ecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHH
Q 013869 218 LPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (435)
Q Consensus 218 ~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~ 297 (435)
+|++|..++...+..++..|.+++ +..+++..+++. ++++++|++.++|.++..+.+..+. .
T Consensus 243 ~p~~h~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l~~~~~~-------~ 304 (567)
T PLN02479 243 LPMFHCNGWCFTWTLAALCGTNIC-LRQVTAKAIYSA----------IANYGVTHFCAAPVVLNTIVNAPKS-------E 304 (567)
T ss_pred cchhhhhhHHHHHHHHhhcCceEe-ccCCCHHHHHHH----------HHHcCCeEEEecHHHHHHHHhhhhh-------c
Confidence 999999987654445566666554 467888888888 5669999999999999999865221 1
Q ss_pred hhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccC---CC--------CCCCCCccceecCCCe-
Q 013869 298 SASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP---LR--------GARKAGTVGNPLPGVQ- 365 (435)
Q Consensus 298 ~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~---~~--------~~~~~~~~G~p~~~~~- 365 (435)
....+++++.++++|+++++++.++|.+. +.++++.||+||+++.++.. .. ......+.|.+.+++.
T Consensus 305 ~~~~~~~l~~~~~~G~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~ 383 (567)
T PLN02479 305 TILPLPRVVHVMTAGAAPPPSVLFAMSEK-GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEG 383 (567)
T ss_pred ccccccceeEEEEcCCCCCHHHHHHHHhc-CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCc
Confidence 11246889999999999999999999876 88999999999986433211 00 0011235688888876
Q ss_pred EEEecC-CCCCCCC--c-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 366 VKIAED-ESGSDAA--G-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 366 ~~i~d~-~~~~~~~--~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++|+|+ .+..++. + .|||+++|+.++.||+++++.+.+.|. +|||+|||+|+++++|+++++||.+|+|
T Consensus 384 ~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~~-~g~~~TGDl~~~~~~g~l~~~GR~~d~i 456 (567)
T PLN02479 384 LDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAFA-NGWFHSGDLGVKHPDGYIEIKDRSKDII 456 (567)
T ss_pred eeEEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchhc-CCceecceeEEEcCCccEEEeccccceE
Confidence 888884 4555542 2 699999999999999999999999984 7999999999999999999999999975
No 103
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.5e-50 Score=399.44 Aligned_cols=392 Identities=20% Similarity=0.239 Sum_probs=312.6
Q ss_pred HHhcccCCCeeEEEe--CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHH
Q 013869 8 YKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (435)
Q Consensus 8 ~~~~~~~p~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~ 85 (435)
..+++++|+++|++. .++.+||.||.++++++|.+|.+. |+++|++|+++++|++++++++
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~-----------------g~~~~~~V~v~~~~~~~~~~~~ 66 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSL-----------------GLKRGDHVAIFMENNLRYLEVC 66 (511)
T ss_pred hhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHHHHHHH
Confidence 467888999999987 578899999999999999999994 9999999999999999999999
Q ss_pred HHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCcc--ccCCCCCCCCCccccccchh-hh
Q 013869 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKF--SLIPPVPNVSSETTVFDQSQ-AE 162 (435)
Q Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~ 162 (435)
+||+++|++++|+++.++.+++.+++++++++.++++......+........... ..+................. .+
T Consensus 67 ~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (511)
T PRK13391 67 WAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAGLP 146 (511)
T ss_pred HHHHHhccEEeccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcCCC
Confidence 9999999999999999999999999999999999999987766655544332211 11110000000000000000 01
Q ss_pred hccCCCCCCcEEEEecCCCCCCCceEEee--hHHHHH---HHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcC
Q 013869 163 KMDGQRGEDPALIVYTSGTTGKPKGVVHT--HKSIDA---QVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (435)
Q Consensus 163 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t--~~~l~~---~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G 237 (435)
.......++.++++|||||||.||+|.++ |.++.. ........+++.+.++++...|++|..++. ..+.++..|
T Consensus 147 ~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~-~~~~~~~~g 225 (511)
T PRK13391 147 ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQR-AVMLVIRLG 225 (511)
T ss_pred CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHH-HHHHHHHcC
Confidence 11122345678999999999999999964 555432 233345566788899999999999998886 477889999
Q ss_pred CEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCH
Q 013869 238 ATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (435)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~ 317 (435)
+++++.+.+++..+++. +.++++|++.++|+++..+++.... .....+++++|.+++||+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~~------~~~~~~~~~l~~~~~gg~~~~~ 289 (511)
T PRK13391 226 GTVIVMEHFDAEQYLAL----------IEEYGVTHTQLVPTMFSRMLKLPEE------VRDKYDLSSLEVAIHAAAPCPP 289 (511)
T ss_pred ceEEECCCCCHHHHHHH----------HHHhCCeEEEehHHHHHHHHhCchh------hcccCCccceeEEEEccCCCCH
Confidence 99999999999998888 5669999999999999988764221 1122357899999999999999
Q ss_pred HHHHHHHHHhCCcccccccCccccchhccCCC-CCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCcccccc
Q 013869 318 PVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYW 395 (435)
Q Consensus 318 ~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~ 395 (435)
++++.+.+.++..+++.||+||++.++..... ....++++|+|.++ +++++|+++...+.+ .|||+++|+ +..||+
T Consensus 290 ~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g~~Gel~~~g~-~~~gy~ 367 (511)
T PRK13391 290 QVKEQMIDWWGPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILDDDGAELPPGEPGTIWFEGG-RPFEYL 367 (511)
T ss_pred HHHHHHHHHcCCceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEecC-cceEEc
Confidence 99999999999999999999999865543222 23456789999999 699999888887666 799999999 889999
Q ss_pred CCchhcccccccC-CccccCceEEEcCCccEEEecccccCC
Q 013869 396 KLPKVTKDSFTAD-GFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 396 ~~~~~~~~~~~~~-g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++++.+...+..+ +||+|||+|++++||.+++.||.+|+|
T Consensus 368 ~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i 408 (511)
T PRK13391 368 NDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMI 408 (511)
T ss_pred CChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEE
Confidence 9999998888655 899999999999999999999999975
No 104
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.6e-50 Score=404.16 Aligned_cols=394 Identities=21% Similarity=0.320 Sum_probs=308.9
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCC---cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCC
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQ---KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~---~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~ 77 (435)
+++.++|...++.+|+.+++...+ +.+||.||+.++.++|++|.+. |+++||+|+++++|
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~-----------------gi~~gd~V~l~~~n 83 (579)
T PRK09192 21 PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLAL-----------------GLKPGDRVALIAET 83 (579)
T ss_pred hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEcCC
Confidence 368899999999998877664332 6799999999999999999994 99999999999999
Q ss_pred CHHHHHHHHHHHHhCCeEEeCCCCCC-------HHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCC
Q 013869 78 SFEFVAGVLGTWFSGCIAVPLALSYP-------ESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVS 150 (435)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (435)
+++++++++||+++|++++|+++..+ .+++.++++.+++++++++.+..+.+......... +. +.......
T Consensus 84 ~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 161 (579)
T PRK09192 84 DGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPL-LH-VLSHAWFK 161 (579)
T ss_pred chhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccc-cc-eeehhhhc
Confidence 99999999999999999999976433 57899999999999999999887766554322111 01 10101110
Q ss_pred CccccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHH-hccCCCCCeeEEeecchhhhHHHHH
Q 013869 151 SETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE-AWEYTSADQFLHCLPLHHVHGLFNA 229 (435)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~~l~~~pl~~~~g~~~~ 229 (435)
.. ...........++++++++|||||||.||+|.++|++++.++..... .+++.++|+++.++|++|..+++..
T Consensus 162 ~~-----~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~ 236 (579)
T PRK09192 162 AL-----PEADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGF 236 (579)
T ss_pred cc-----CCCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHH
Confidence 00 00011122356789999999999999999999999999998888777 7889999999999999999998877
Q ss_pred HHHHHHcCCEEEEcCCc----chhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhcccc
Q 013869 230 LLAPLYAGATVEFMPKF----SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQL 305 (435)
Q Consensus 230 ~~~~l~~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~l 305 (435)
++.++..|+++++.+.. ++..++.. +.+++++.++..|..+..+...... ......+++++
T Consensus 237 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~l~~~~~~~-----~~~~~~~l~~l 301 (579)
T PRK09192 237 LLTPVATQLSVDYLPTRDFARRPLQWLDL----------ISRNRGTISYSPPFGYELCARRVNS-----KDLAELDLSCW 301 (579)
T ss_pred HHHHHHhCCeeEeeCHHHHHHCHHHHHHH----------HHhcCcEEEeCCcHHHHHHHHhhcc-----ccccccchhhh
Confidence 88889999999877632 45555555 6678999877765555554432211 01122467899
Q ss_pred EEEEecCCCCCHHHHHHHHHHhC------CcccccccCccccchhccCCCCC----------------------------
Q 013869 306 RLMMCGSSALPLPVMQQWETITG------HRLLERYGMTEFVMAISNPLRGA---------------------------- 351 (435)
Q Consensus 306 r~i~~~G~~l~~~l~~~~~~~~~------~~l~~~YG~tE~~~~~~~~~~~~---------------------------- 351 (435)
|.+++||+++++.+.+.|.+.++ ..+++.||+||++..++......
T Consensus 302 r~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (579)
T PRK09192 302 RVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRV 381 (579)
T ss_pred heeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccc
Confidence 99999999999999999998873 35899999999976544221110
Q ss_pred CCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecc
Q 013869 352 RKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGR 430 (435)
Q Consensus 352 ~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR 430 (435)
....++|+|+|+++++|+|+++..++.+ .|||+++|+.++.||+++ +.+.+.+..+|||+|||+|++ ++|+++++||
T Consensus 382 ~~~~~vG~~~p~~~v~i~d~~~~~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR 459 (579)
T PRK09192 382 RTFVNCGKALPGHEIEIRNEAGMPLPERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGR 459 (579)
T ss_pred eeEeecCCcCCCcEEEEECCCCCCCCCCCEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEec
Confidence 1124789999999999999888777666 799999999999999999 667777778999999999999 9999999999
Q ss_pred cccCC
Q 013869 431 KGIYF 435 (435)
Q Consensus 431 ~~d~i 435 (435)
++|+|
T Consensus 460 ~dd~i 464 (579)
T PRK09192 460 AKDLI 464 (579)
T ss_pred cccEE
Confidence 99986
No 105
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-49 Score=398.06 Aligned_cols=397 Identities=22% Similarity=0.333 Sum_probs=310.7
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+||.++|.++++++|+++|+++.++.+||.||.++++++|.+|.+ +|+++||+|+++++|+++
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~-----------------~g~~~~~~v~v~~~n~~~ 65 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIA-----------------QGLGPGDHVGIYARNRIE 65 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHH
Confidence 578999999999999999999999999999999999999999998 599999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCc--cccCCCCCCCC------Cc
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK--FSLIPPVPNVS------SE 152 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~ 152 (435)
+++++|||+++|++++|+++.++.+++.++++++++++++++......+.+........ +..+....... ..
T Consensus 66 ~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (533)
T PRK07798 66 YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDY 145 (533)
T ss_pred HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccH
Confidence 99999999999999999999999999999999999999999988777766654332211 11111110000 00
Q ss_pred cccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh---------ccC------CCCCeeEEe
Q 013869 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---------WEY------TSADQFLHC 217 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---------~~~------~~~~~~l~~ 217 (435)
..................+.++++|||||||.||+|.++|+++.......... ..+ ..+++++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (533)
T PRK07798 146 EDALAAGSPERDFGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPA 225 (533)
T ss_pred HHHHhccCCcCCCCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEe
Confidence 00000000011111233456799999999999999999999987655443221 111 566889999
Q ss_pred ecchhhhHHHHHHHHHHHcCCEEEEcC--CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHH-HHhhhccccHHH
Q 013869 218 LPLHHVHGLFNALLAPLYAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR-LIQGYEAMDTEL 294 (435)
Q Consensus 218 ~pl~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~-l~~~~~~~~~~~ 294 (435)
+|++|..+++ .++.++..|+++++.+ .+++..++.. ++++++|++.++|..+.. +.+...
T Consensus 226 ~pl~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~~~l~~~~~------ 288 (533)
T PRK07798 226 PPLMHGAGQW-AAFAALFSGQTVVLLPDVRFDADEVWRT----------IEREKVNVITIVGDAMARPLLDALE------ 288 (533)
T ss_pred cchhhhhhHH-HHHHHHhcCceEEEecCCCcCHHHHHHH----------HHHhCCeEEEechHHHHHHHHHHhc------
Confidence 9999999997 6899999999999999 7888888888 566899999999876643 333221
Q ss_pred HHHhhhhccccEEEEecCCCCCHHHHHHHHHHh-CCcccccccCccccchhccCCCCCCCCCccc--eecCCCeEEEecC
Q 013869 295 QAASASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPLRGARKAGTVG--NPLPGVQVKIAED 371 (435)
Q Consensus 295 ~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G--~p~~~~~~~i~d~ 371 (435)
......++++|.+++||++++.++.++|.+.+ +..+++.||+||++.+....... .....| ++.++..++++|+
T Consensus 289 -~~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~--~~~~~g~~~~~~~~~~~i~~~ 365 (533)
T PRK07798 289 -ARGPYDLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAK--GAVHTGGPRFTIGPRTVVLDE 365 (533)
T ss_pred -ccccCCCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCC--CCccCCCCccCCCceEEEECC
Confidence 11234578999999999999999999999988 78999999999997655433221 112333 7889999999999
Q ss_pred CCCCCCCc-c--ceEEEecCCccccccCCchhccccccc---CCccccCceEEEcCCccEEEecccccCC
Q 013869 372 ESGSDAAG-V--GEICVKSPSLFKEYWKLPKVTKDSFTA---DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 372 ~~~~~~~~-~--Gel~v~~~~~~~gy~~~~~~~~~~~~~---~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++...+.+ . |+++ +++.++.||+++++.+++.|.. ++||+|||+|++|+||++++.||.+|+|
T Consensus 366 ~~~~~~~g~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i 434 (533)
T PRK07798 366 DGNPVEPGSGEIGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCI 434 (533)
T ss_pred CCCCCCCCCCCeeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceE
Confidence 88876665 3 5565 5668999999999999888743 4699999999999999999999999975
No 106
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-49 Score=390.31 Aligned_cols=354 Identities=25% Similarity=0.351 Sum_probs=295.3
Q ss_pred hHHHHH-HHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 2 EVFKAA-YKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 2 ~i~~~~-~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
++.+.+ .+.++++|+++|+++.++.+||.||.++++++|.+|.+. |+++|++|+++++|+++
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~-----------------g~~~~~~v~l~~~~~~~ 65 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQ-----------------GVVEGSGVALRGKNSPE 65 (458)
T ss_pred hhhcChHHHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEecCCCHH
Confidence 344444 345788999999999999999999999999999999995 99999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchh
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
++++++||+++|++++|+++..+.+++..+++++++++++++++.... ... . .. .. . . ..
T Consensus 66 ~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~-~-------~~---~~-~--~-----~~ 125 (458)
T PRK09029 66 TLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENTF-SAL-T-------SL---HL-Q--L-----VE 125 (458)
T ss_pred HHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccch-hhc-c-------cc---cc-c--c-----cc
Confidence 999999999999999999999999999999999999999998765321 100 0 00 00 0 0 00
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEE
Q 013869 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (435)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~ 240 (435)
........++++++++|||||||.||+|.++|++++..+......+++.++++++..+|++|.+++. .++.++..|+++
T Consensus 126 ~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~-~~~~~l~~G~~v 204 (458)
T PRK09029 126 GAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQG-IVWRWLYAGATL 204 (458)
T ss_pred ccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhH-HHHHHHhCCceE
Confidence 0112245678999999999999999999999999999999888888999999999999999999986 477889999999
Q ss_pred EEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHH
Q 013869 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (435)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~ 320 (435)
++.+. ..++.. + .++|.+..+|+++..++..... ..++|.+++||++++..+.
T Consensus 205 ~~~~~---~~~~~~----------i--~~~t~~~~~P~~~~~l~~~~~~------------~~~l~~i~~gG~~~~~~~~ 257 (458)
T PRK09029 205 VVRDK---QPLEQA----------L--AGCTHASLVPTQLWRLLDNRSE------------PLSLKAVLLGGAAIPVELT 257 (458)
T ss_pred EeCCh---HHHHHH----------H--hhceeeecChHHHHHHHhcccc------------CCcceEEEECCCCCCHHHH
Confidence 99885 233343 2 4789999999999988764221 3469999999999999999
Q ss_pred HHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCccceEEEecCCccccccCCchh
Q 013869 321 QQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKV 400 (435)
Q Consensus 321 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~ 400 (435)
+.+.+. +.++++.||+||++...+.... ....++|+|++++++++.+ |||+++|+.++.||+++++.
T Consensus 258 ~~~~~~-g~~~~~~YG~tE~~~~~~~~~~--~~~~~~G~~~~~~~~~i~~----------gel~v~g~~~~~gY~~~~~~ 324 (458)
T PRK09029 258 EQAEQQ-GIRCWCGYGLTEMASTVCAKRA--DGLAGVGSPLPGREVKLVD----------GEIWLRGASLALGYWRQGQL 324 (458)
T ss_pred HHHHHc-CCcEeccccccccCcceeccCC--CCCCCCCCCCCCCEEEEeC----------CEEEEecCceeeeeecCccc
Confidence 998865 9999999999999865543222 2345699999999999987 89999999999999999888
Q ss_pred cccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 401 TKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 401 ~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+.... .+|||+|||+|++| ||++++.||.+|+|
T Consensus 325 ~~~~~-~~~~~~TGD~~~~~-~g~l~~~gR~~d~i 357 (458)
T PRK09029 325 VPLVN-DEGWFATRDRGEWQ-NGELTILGRLDNLF 357 (458)
T ss_pred ccccc-CCCccCCCCcEEEe-CCEEEEecccccce
Confidence 76543 57999999999998 99999999999986
No 107
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=1.3e-49 Score=385.39 Aligned_cols=363 Identities=25% Similarity=0.412 Sum_probs=299.0
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHH
Q 013869 28 SYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESEL 107 (435)
Q Consensus 28 Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 107 (435)
||+||.+.++++|++|.+. .|+++||+|+++++|+++++++++||+.+|++++|+++.++.+++
T Consensus 1 t~~~l~~~~~~~a~~l~~~----------------~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~ 64 (408)
T TIGR01733 1 TYRELDERANRLARHLRAA----------------GGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERL 64 (408)
T ss_pred CHHHHHHHHHHHHHHHHHh----------------hCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHH
Confidence 7999999999999999983 389999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhhhhccCCCCCCcEEEEecCCCCCCCce
Q 013869 108 LHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKG 187 (435)
Q Consensus 108 ~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 187 (435)
.+++++++++++++++.....+..... ....+.. ........ .............+++++++|||||||.||+
T Consensus 65 ~~~l~~~~~~~ii~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~ 137 (408)
T TIGR01733 65 AFILEDAGARLLLTDSALASRLAGLVL----PIILVDP-LELAALDD--APAPPPPDAPSGPDDLAYVIYTSGSTGRPKG 137 (408)
T ss_pred HHHHHhcCCCEEEEcCchhhhccccCC----ceEEech-hhhhhccc--ccccccccCCCCCCCcEEEEEcCCCCCCCCE
Confidence 999999999999999987665433211 1111100 00000000 0000001111457899999999999999999
Q ss_pred EEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcch---hHHHHHHHhhcCCCCC
Q 013869 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV---RGIWQRWRESYPVNGN 264 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 264 (435)
|.++|+++..........+.+.+.+++++..|++|..++. .++.++..|+++++.++... ..+...
T Consensus 138 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~~~---------- 206 (408)
T TIGR01733 138 VVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVE-EIFGTLLAGATLVVPPEDEERDAALLAAL---------- 206 (408)
T ss_pred EEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHH-HHHHHHhCCCEEEEcChhhccCHHHHHHH----------
Confidence 9999999999999998888999999999999999999986 69999999999999987654 344444
Q ss_pred ccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhC-CcccccccCccccch
Q 013869 265 RAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMA 343 (435)
Q Consensus 265 i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~-~~l~~~YG~tE~~~~ 343 (435)
++++++|.+.++|.+++.+++... ..++++|.+++||+++++++++.|.+.++ +.+++.||+||++.+
T Consensus 207 ~~~~~~t~l~~~p~~~~~l~~~~~-----------~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~ 275 (408)
T TIGR01733 207 IAEHPVTVLNLTPSLLALLAAALP-----------PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVW 275 (408)
T ss_pred HHHcCceEEEeCHHHHHHHHHhhh-----------hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEE
Confidence 666899999999999999987522 45789999999999999999999999997 899999999999876
Q ss_pred hccC-CC--CCC--CCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccccCCchhcccccccC------C--
Q 013869 344 ISNP-LR--GAR--KAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTAD------G-- 409 (435)
Q Consensus 344 ~~~~-~~--~~~--~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~------g-- 409 (435)
++.. .. ... ...++|+|.++++++|+|+++...+.+ .|||+++|+.++.||+++++.+.+.|..+ |
T Consensus 276 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~ 355 (408)
T TIGR01733 276 STATLVDADDAPRESPVPIGRPLANTRLYVLDDDLRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGAR 355 (408)
T ss_pred EEEEEcCccccCCccccccCcccCCceEEEECCCCCCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCce
Confidence 6421 11 111 267899999999999999888776666 79999999999999999999998887443 2
Q ss_pred ccccCceEEEcCCccEEEecccccCC
Q 013869 410 FFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 410 ~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
||+|||+|++|++|++++.||.+|+|
T Consensus 356 ~~~TGDl~~~d~~g~~~~~gR~~~~i 381 (408)
T TIGR01733 356 LYRTGDLVRYLPDGNLEFLGRIDDQV 381 (408)
T ss_pred EEECCceEEEcCCCCEEEeeccCCEE
Confidence 99999999999999999999999975
No 108
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.2e-49 Score=393.97 Aligned_cols=397 Identities=20% Similarity=0.267 Sum_probs=307.8
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
|+..+.|.+.++.+|+++|++..+.++||+||.++++++|.+|.+ .|+++||+|+++++|+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~-----------------~g~~~g~~v~i~~~~~~~ 80 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALAR-----------------RGIGRGDTVAVLLPNIPA 80 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCchH
Confidence 567889999999999999999999999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCc-cccCCCCCCCC---------
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPNVS--------- 150 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------- 150 (435)
++++++||+++|++++|+++.++.+++..+++.++++.++++++..+.+.......+.. ...+.......
T Consensus 81 ~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (545)
T PRK08162 81 MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGAL 160 (545)
T ss_pred HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccc
Confidence 99999999999999999999999999999999999999999998877766544332221 11111110000
Q ss_pred Cccccccc-hhh-hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHH
Q 013869 151 SETTVFDQ-SQA-EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN 228 (435)
Q Consensus 151 ~~~~~~~~-~~~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~ 228 (435)
........ .+. ......+.++.++++|||||||.||+|.++|+++..........+.+..++++++.+|++|..++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~ 240 (545)
T PRK08162 161 DYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCF 240 (545)
T ss_pred cHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHH
Confidence 00000000 000 0111223457899999999999999999999998777666666677888899999999999998765
Q ss_pred HHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEE
Q 013869 229 ALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (435)
Q Consensus 229 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i 308 (435)
.++ ....|++.++...+++..+++. ++++++|++.++|+++..|++.... ....+...+.+
T Consensus 241 ~~~-~~~~~g~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l~~~~~~--------~~~~~~~~~~~ 301 (545)
T PRK08162 241 PWT-VAARAGTNVCLRKVDPKLIFDL----------IREHGVTHYCGAPIVLSALINAPAE--------WRAGIDHPVHA 301 (545)
T ss_pred HHH-HHHHccEEEEeCCCCHHHHHHH----------HHHcCCeEEEechHHHHHHHhCccc--------cccCCccceEE
Confidence 444 3445666666677889998888 5669999999999999999875321 11233456677
Q ss_pred EecCCCCCHHHHHHHHHHhCCcccccccCccccchhccCCCC-----------CCCCCccceecC-CCeEEEecC-CCCC
Q 013869 309 MCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG-----------ARKAGTVGNPLP-GVQVKIAED-ESGS 375 (435)
Q Consensus 309 ~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~p~~-~~~~~i~d~-~~~~ 375 (435)
+++|+.++.++.+.+.+. +.++++.||+||+++.++..... .....+.|.+.+ +..++|+|+ ++..
T Consensus 302 ~~~g~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~ 380 (545)
T PRK08162 302 MVAGAAPPAAVIAKMEEI-GFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQP 380 (545)
T ss_pred EECCCCCCHHHHHHHHHh-CCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcc
Confidence 899999999999998774 89999999999986433321110 011245566655 345788885 4555
Q ss_pred CCC--c-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 376 DAA--G-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 376 ~~~--~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
.+. + .|||+++|+.++.||+++++.+...|. +|||+|||+|++|+||+++++||.+|+|
T Consensus 381 ~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~~-~g~~~TGDl~~~d~dg~l~~~GR~~~~i 442 (545)
T PRK08162 381 VPADGETIGEIMFRGNIVMKGYLKNPKATEEAFA-GGWFHTGDLAVLHPDGYIKIKDRSKDII 442 (545)
T ss_pred cCCCCCceeEEEEecCcchhhhcCChhhhHHHhh-CCCcccCceEEEcCCccEEEEecccceE
Confidence 543 2 599999999999999999999998884 7899999999999999999999999875
No 109
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-48 Score=389.28 Aligned_cols=382 Identities=24% Similarity=0.338 Sum_probs=304.0
Q ss_pred eEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEe
Q 013869 18 VAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVP 97 (435)
Q Consensus 18 ~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 97 (435)
.|++..++.+||.||.++++++|++|.+. |+++|++|+++++|+++++++++||+++|+++++
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~~-----------------g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~ 65 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAAL-----------------GVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVP 65 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 46778889999999999999999999994 9999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCC--------------Cccccccch-hhh
Q 013869 98 LALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVS--------------SETTVFDQS-QAE 162 (435)
Q Consensus 98 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~-~~~ 162 (435)
+++..+.+++.++++.+++++++++......+....... ............. ......... ...
T Consensus 66 l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (509)
T PRK12406 66 VNWHFKPEEIAYILEDSGARVLIAHADLLHGLASALPAG-VTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE 144 (509)
T ss_pred cCcccCHHHHHHHHhccCCcEEEEccchhhhhhhhhhcc-cceeecccccccccccccccccccCCCCccCHHHHhcccC
Confidence 999999999999999999999999987766543332111 0010000000000 000000000 001
Q ss_pred hccCCCCCCcEEEEecCCCCCCCceEEeehHH---HHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCE
Q 013869 163 KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKS---IDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (435)
Q Consensus 163 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~---l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (435)
+......+++++++|||||||.||+|.++|.. +..........+++.++++++...|++|..+... .+.++..|++
T Consensus 145 ~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~ 223 (509)
T PRK12406 145 PYDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAY-GLRAGRLGGV 223 (509)
T ss_pred ccCCCCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHH-HHHHHhhheE
Confidence 12234578999999999999999999987654 3444444556678889999999999999988765 4557889999
Q ss_pred EEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHH
Q 013869 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (435)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l 319 (435)
+++.+.+++..+++. ++++++|.+.++|+++..+++..+. .....+++++|.++.||+++++++
T Consensus 224 ~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l~~~~~~------~~~~~~~~~l~~v~~gg~~~~~~~ 287 (509)
T PRK12406 224 LVLQPRFDPEELLQL----------IERHRITHMHMVPTMFIRLLKLPEE------VRAKYDVSSLRHVIHAAAPCPADV 287 (509)
T ss_pred EEEccCCCHHHHHHH----------HHHcCCeEEEccHHHHHHHHhCchh------hcccCCCCceeEEEEcCCCCCHHH
Confidence 999998888888888 5669999999999999999864321 112235789999999999999999
Q ss_pred HHHHHHHhCCcccccccCccccchhccCCC-CCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccc-cccC
Q 013869 320 MQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFK-EYWK 396 (435)
Q Consensus 320 ~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~-gy~~ 396 (435)
++.+.+.++..+++.||+||++.+++.... ....++++|+|.++++++++|++++.++.+ .|||+++|+.++. ||++
T Consensus 288 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~~~y~~ 367 (509)
T PRK12406 288 KRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVDEDGRPLPQGEIGEIYSRIAGNPDFTYHN 367 (509)
T ss_pred HHHHHHHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEECCCCCCCCCCCceEEEEECCccccccccC
Confidence 999999999999999999999876554322 234567899999999999999988887666 7999999998875 9999
Q ss_pred CchhcccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 397 LPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 397 ~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+++.+...+ .+|||+|||+|++++||++++.||.+|+|
T Consensus 368 ~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~GR~~d~i 405 (509)
T PRK12406 368 KPEKRAEID-RGGFITSGDVGYLDADGYLFLCDRKRDMV 405 (509)
T ss_pred Cchhccccc-CCCCeEEccEEEEcCCceEEEeecccceE
Confidence 988877665 58999999999999999999999999975
No 110
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.6e-49 Score=391.56 Aligned_cols=382 Identities=21% Similarity=0.255 Sum_probs=304.9
Q ss_pred eEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEe
Q 013869 18 VAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVP 97 (435)
Q Consensus 18 ~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 97 (435)
.++...++.+||.||.++++++|++|.+. |+++||+|+++++|+++++++++||+++|++++|
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~~-----------------g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 65 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRAL-----------------GLREGDVVAILLENNPEFFEVYWAARRSGLYYTP 65 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEe
Confidence 45556789999999999999999999994 9999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCC--ccccCCCCCCCCCccccccch-hhhhccCCCCCCcEE
Q 013869 98 LALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPNVSSETTVFDQS-QAEKMDGQRGEDPAL 174 (435)
Q Consensus 98 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 174 (435)
+++.++.+++.++++.++++++++++.....+......... ....+... ............ ..........++.++
T Consensus 66 l~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 144 (502)
T PRK08276 66 INWHLTAAEIAYIVDDSGAKVLIVSAALADTAAELAAELPAGVPLLLVVAG-PVPGFRSYEEALAAQPDTPIADETAGAD 144 (502)
T ss_pred cccccCHHHHHHHHhcCCCCEEEEccchhhHHHHHhhhccccccEEEEeCC-CCCccccHHHHHhcCCCCCCCCCCcceE
Confidence 99999999999999999999999999887766555443321 11111100 000000000000 001112235577899
Q ss_pred EEecCCCCCCCceEEeehHHHHHHH------HHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcch
Q 013869 175 IVYTSGTTGKPKGVVHTHKSIDAQV------QMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV 248 (435)
Q Consensus 175 i~~TSGtTG~pK~v~~t~~~l~~~~------~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~ 248 (435)
++|||||||.||+|.++|.++.... ............+++++..|++|..++.. .+.++..|+++++.+.+++
T Consensus 145 i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~~~ 223 (502)
T PRK08276 145 MLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVMEKFDA 223 (502)
T ss_pred EEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcCCCCH
Confidence 9999999999999999987754332 11122222346789999999999999875 5678999999999999999
Q ss_pred hHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhC
Q 013869 249 RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG 328 (435)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~ 328 (435)
..+++. ++++++|++.++|+++..+++..+.. ....+++++|.++++|++++.++++.+.+.++
T Consensus 224 ~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~ 287 (502)
T PRK08276 224 EEALAL----------IERYRVTHSQLVPTMFVRMLKLPEEV------RARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG 287 (502)
T ss_pred HHHHHH----------HHHhCCeEEEehHHHHHHHHhCcccc------CCCCCcccceEEEecCCCCCHHHHHHHHHHhC
Confidence 888888 66689999999999999998753211 11235789999999999999999999999999
Q ss_pred CcccccccCccccchhccCC-CCCCCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccccCCchhcccccc
Q 013869 329 HRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFT 406 (435)
Q Consensus 329 ~~l~~~YG~tE~~~~~~~~~-~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~ 406 (435)
..+++.||+||++.+++... ......+++|+|+ +++++++|+++..++.+ .|||+++|+.++.||+++++.+...+.
T Consensus 288 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 366 (502)
T PRK08276 288 PIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILDEDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARN 366 (502)
T ss_pred cHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEECCCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhc
Confidence 99999999999987544322 2234567899999 88999999888877666 799999999999999999999999998
Q ss_pred cCCccccCceEEEcCCccEEEecccccCC
Q 013869 407 ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 407 ~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
++|||+|||+|+++++|.+++.||.+|+|
T Consensus 367 ~~~~~~TGD~~~~~~~g~~~~~GR~~~~i 395 (502)
T PRK08276 367 PHGWVTVGDVGYLDEDGYLYLTDRKSDMI 395 (502)
T ss_pred CCCceeecceEEEcCCcCEEEeccCcceE
Confidence 78999999999999999999999999875
No 111
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-48 Score=389.94 Aligned_cols=391 Identities=23% Similarity=0.325 Sum_probs=306.7
Q ss_pred hHHHHHHHhcccCCCeeEEEeC--CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH
Q 013869 2 EVFKAAYKKGSMARDSVAIRAD--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~ 79 (435)
++.+.|.+.|..+|+.+++.+. .+.+||.||+++++++|++|.+. |+++||+|+|+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~-----------------g~~~gd~V~l~~~~~~ 65 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAA-----------------GVGPGDAVAVLAGAPV 65 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCch
Confidence 4778899999999999999764 46899999999999999999994 9999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCHHHH-------HHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCc
Q 013869 80 EFVAGVLGTWFSGCIAVPLALSYPESEL-------LHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSE 152 (435)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (435)
+++++++||+++|++++++++..+.+++ .++++.++++.+++++.....+...... ...+..+ .++..
T Consensus 66 ~~~~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~---~~l~~- 140 (545)
T PRK07768 66 EIAPTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEK-GIRVLTV---ADLLA- 140 (545)
T ss_pred HHHHHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhccc-CCceeeh---hhhcc-
Confidence 9999999999999999999988776543 4567889999999988765544332111 1111111 11100
Q ss_pred cccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCC-CeeEEeecchhhhHHHHHHH
Q 013869 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSA-DQFLHCLPLHHVHGLFNALL 231 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~~l~~~pl~~~~g~~~~~~ 231 (435)
... .......++++++++|||||||.||+|.++|+++...+.......++..+ |++++.+|++|..++...++
T Consensus 141 -----~~~-~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 214 (545)
T PRK07768 141 -----ADP-IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLT 214 (545)
T ss_pred -----cCC-CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHH
Confidence 000 01224567999999999999999999999999999988888888888876 89999999999999887778
Q ss_pred HHHHcCCEEEEcCCc----chhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEE
Q 013869 232 APLYAGATVEFMPKF----SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307 (435)
Q Consensus 232 ~~l~~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~ 307 (435)
.++..|+++++.++. ++..++.. +.+++++++...|..+..+.+..++... ....+++++|.
T Consensus 215 ~~l~~g~~~v~~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~lr~ 280 (545)
T PRK07768 215 VPMYFGAELVKVTPMDFLRDPLLWAEL----------ISKYRGTMTAAPNFAYALLARRLRRQAK----PGAFDLSSLRF 280 (545)
T ss_pred HHHHCCceEEEeCHHHHHHhHHHHHHH----------HHHhCCEEEECchHHHHHHHHHHhcccc----ccCCCchheee
Confidence 889999999988753 34444444 6779999998888877776654322110 11245789999
Q ss_pred EEecCCCCCHHHHHHHHHH---hCC---cccccccCccccchhccCCCC--------------------------CCCCC
Q 013869 308 MMCGSSALPLPVMQQWETI---TGH---RLLERYGMTEFVMAISNPLRG--------------------------ARKAG 355 (435)
Q Consensus 308 i~~~G~~l~~~l~~~~~~~---~~~---~l~~~YG~tE~~~~~~~~~~~--------------------------~~~~~ 355 (435)
++.+|+++++++.+.|.+. ++. .+++.||+||++..++..... .....
T Consensus 281 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (545)
T PRK07768 281 ALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLA 360 (545)
T ss_pred EEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEE
Confidence 9999999999999999875 455 499999999998654321111 12345
Q ss_pred ccceecCCCeEEEecCCCCCCCCc-cceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEecccccC
Q 013869 356 TVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIY 434 (435)
Q Consensus 356 ~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~ 434 (435)
++|+|.++++++++|++++.++.+ .|||+++|+.++.||++++... ..++.+|||+|||+|++++||+++++||.+|+
T Consensus 361 ~~G~~~~g~~~~i~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~-~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~ 439 (545)
T PRK07768 361 TLGPPLPGLEVRVVDEDGQVLPPRGVGVIELRGESVTPGYLTMDGFI-PAQDADGWLDTGDLGYLTEEGEVVVCGRVKDV 439 (545)
T ss_pred eccCCCCCCEEEEECCCCCCCCCCCEEEEEEccCcccccccCCCCCc-ccccCCCeeeccceEEEecCCEEEEEccccce
Confidence 899999999999999888877665 7999999999999999865443 33446789999999999999999999999997
Q ss_pred C
Q 013869 435 F 435 (435)
Q Consensus 435 i 435 (435)
|
T Consensus 440 i 440 (545)
T PRK07768 440 I 440 (545)
T ss_pred E
Confidence 5
No 112
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-48 Score=359.45 Aligned_cols=397 Identities=21% Similarity=0.222 Sum_probs=310.5
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC--cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQ--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~--~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~ 79 (435)
+++++|..+++++|+|+|+++++ +++||+|+.+.++++|+.|..+ +++.||.|||.++|.+
T Consensus 78 ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~-----------------~l~~GD~VAL~men~p 140 (649)
T KOG1179|consen 78 TIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAE-----------------GLKAGDVVALLMENRP 140 (649)
T ss_pred cHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHh-----------------hcccCCEEEEecCCCh
Confidence 68999999999999999999977 6999999999999999999996 8999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCc-cc--cCCCCCCCCCccccc
Q 013869 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FS--LIPPVPNVSSETTVF 156 (435)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~ 156 (435)
+|+..+|+++++|++.+.||++...+.+.|.++.+++++++++++....+.++.+..... +. ...............
T Consensus 141 efv~lWlGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~ 220 (649)
T KOG1179|consen 141 EFVALWLGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLL 220 (649)
T ss_pred hHHHHHHhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHH
Confidence 999999999999999999999999999999999999999999999998877773332211 11 111111111111111
Q ss_pred --------cchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHH
Q 013869 157 --------DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN 228 (435)
Q Consensus 157 --------~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~ 228 (435)
++.+..........++++++|||||||.||+.+++|..+......+...++++++|++..++|++|..+.+.
T Consensus 221 ~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~il 300 (649)
T KOG1179|consen 221 AKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGIL 300 (649)
T ss_pred HhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHH
Confidence 111112344667789999999999999999999999999888888889999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEE
Q 013869 229 ALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (435)
Q Consensus 229 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i 308 (435)
++.+++..|+|+++..+|++.++|+. ..+|++|+...+-.+++-|++.+....+ +.-+.=
T Consensus 301 Gi~~~l~~GaT~VlrkKFSAS~FW~D----------C~k~~~Tv~QYIGElcRYLl~~p~~~~e----------r~HkVR 360 (649)
T KOG1179|consen 301 GIGGCLLHGATVVLRKKFSASNFWDD----------CRKYNVTVIQYIGELCRYLLNQPPSPEE----------RQHKVR 360 (649)
T ss_pred HHHHHHhcCceEEEecccchhhhHHH----------HHHhCCeeeehHHHHHHHHHcCCCChhh----------cCceEE
Confidence 99999999999999999999999999 5669999999999999999987543221 122334
Q ss_pred EecCCCCCHHHHHHHHHHhCCc-ccccccCccccchhccCCCCCCC---CCccceecCCCeEEEecCC---------CCC
Q 013869 309 MCGSSALPLPVMQQWETITGHR-LLERYGMTEFVMAISNPLRGARK---AGTVGNPLPGVQVKIAEDE---------SGS 375 (435)
Q Consensus 309 ~~~G~~l~~~l~~~~~~~~~~~-l~~~YG~tE~~~~~~~~~~~~~~---~~~~G~p~~~~~~~i~d~~---------~~~ 375 (435)
+.-|..+.+++++.|.++|+.+ +.+.||+||......+....... .+...+-+.-+++.-+|++ |-+
T Consensus 361 la~GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N~d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~C 440 (649)
T KOG1179|consen 361 LAYGNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVNYDGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLC 440 (649)
T ss_pred EEecCCCCchHHHHHHHHcCCCeEEEEeccccCcceeeeecCccccccchhhhhhhccceEEEEecCCCCceeecCCceE
Confidence 4559999999999999999775 99999999987766654332211 1112333334444444433 322
Q ss_pred --C-CCccceEEEe--cCCc---cccccCCchhccccc-----c-cCCccccCceEEEcCCccEEEecccccCC
Q 013869 376 --D-AAGVGEICVK--SPSL---FKEYWKLPKVTKDSF-----T-ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 376 --~-~~~~Gel~v~--~~~~---~~gy~~~~~~~~~~~-----~-~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+ +++.|.+.-+ .... |.||.++...+++-. . +|-||.|||+-.+|+.|++||.+|..|+|
T Consensus 441 i~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTF 514 (649)
T KOG1179|consen 441 IPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTF 514 (649)
T ss_pred EECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCce
Confidence 2 3335654322 2233 899999666665443 2 24599999999999999999999999986
No 113
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-48 Score=411.28 Aligned_cols=383 Identities=16% Similarity=0.219 Sum_probs=292.9
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 1 ~~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
+++.++|.++++++||++|++++++.+||+||.++++++|+.|.+ +|+++||+|+|+++|+++
T Consensus 447 ~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~-----------------~Gv~~Gd~VaI~~~n~~e 509 (994)
T PRK07868 447 ISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIA-----------------VGVRQGDRVGVLMETRPS 509 (994)
T ss_pred ccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHH
Confidence 578999999999999999999999999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCC----------CCC
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVP----------NVS 150 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 150 (435)
++++++||+++|++++|++|. +++.++++.++++++|++++..+.+... ...+..+.... ...
T Consensus 510 ~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~----~~~iiv~~~~~~~~~~~~~~~~~~ 582 (994)
T PRK07868 510 ALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL----PGRVLVLGGGESRDLDLPDDADVI 582 (994)
T ss_pred HHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc----CceEEEecCCccccccCCcchhhh
Confidence 999999999999999999985 6789999999999999998776654332 11122111000 000
Q ss_pred Cccccccch---hh-hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHH
Q 013869 151 SETTVFDQS---QA-EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGL 226 (435)
Q Consensus 151 ~~~~~~~~~---~~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~ 226 (435)
......... +. .......++++++|+|| ||||.||++.++|.+...........+++.++|++++.+|++|..++
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl 661 (994)
T PRK07868 583 DMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGL 661 (994)
T ss_pred hhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHH
Confidence 000000000 00 00112235899999998 57777888888887765555555566788899999999999999998
Q ss_pred HHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccE
Q 013869 227 FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLR 306 (435)
Q Consensus 227 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr 306 (435)
...++.++..|+++++.+.+++..+++. |+++++|++.++|+++..|++... ....+++++|
T Consensus 662 ~~~l~~~l~gG~~vvl~~~~~~~~~~~~----------I~~~~vT~~~~~Ps~l~~L~~~~~--------~~~~~~~slr 723 (994)
T PRK07868 662 LVSLGGAVVGGSRIALSRGLDPDRFVQE----------VRQYGVTVVSYTWAMLREVVDDPA--------FVLHGNHPVR 723 (994)
T ss_pred HHHHHHHhccceEEEecCCCCHHHHHHH----------HHHhCCcEEEeHHHHHHHHHhCcC--------CccCCCCceE
Confidence 7656677777788888888999999888 667999999999999999987421 1223567899
Q ss_pred EEEecCCCCCHHHHHHHHHHhC-CcccccccCccccchhccCCCCCCCCCccceecCCC-eEEEe-----------cCCC
Q 013869 307 LMMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGV-QVKIA-----------EDES 373 (435)
Q Consensus 307 ~i~~~G~~l~~~l~~~~~~~~~-~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~-~~~i~-----------d~~~ 373 (435)
.++ |+.++++++++|.+.|+ .++++.||+||++....... ..+.+++|+|++|+ +++|. |++|
T Consensus 724 ~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~--~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G 799 (994)
T PRK07868 724 LFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLANVS--GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRG 799 (994)
T ss_pred EEe--cCCCCHHHHHHHHHHhCchheeeeeecccccccccccC--CCCCcccCCccCCCCceeEEEecCcCCceeecCCc
Confidence 776 34599999999999996 78999999999876544321 24567999999998 66654 3444
Q ss_pred --CCCCC-ccceEEEecCCccccccCCchhcc--cccc-cCCccccCceEEEcCCccEEEecccccCC
Q 013869 374 --GSDAA-GVGEICVKSPSLFKEYWKLPKVTK--DSFT-ADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 374 --~~~~~-~~Gel~v~~~~~~~gy~~~~~~~~--~~~~-~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+..+. +.|||+++++.. + +|+.+. ..|. ++|||+|||+|++|+||+|+|+||.||+|
T Consensus 800 ~~~~~~~ge~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~I 862 (994)
T PRK07868 800 FVRRAEVNEVGVLLARARGP----I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVI 862 (994)
T ss_pred eEEEcCCCCceEEEEecCCC----C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEE
Confidence 33443 479999999753 3 343322 2242 47999999999999999999999999986
No 114
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1.6e-48 Score=380.59 Aligned_cols=329 Identities=22% Similarity=0.291 Sum_probs=268.6
Q ss_pred ccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccC-CCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCH
Q 013869 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAG-GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPE 104 (435)
Q Consensus 26 ~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~ 104 (435)
-+.|+||.++++++|++|++. |+ +.|++|+++++|+++++++++||+++|++++|+++.++.
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~-----------------g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~ 81 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQL-----------------ATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQ 81 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHh-----------------cCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCH
Confidence 468999999999999999995 77 579999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhhhhccCCCCCCcEEEEecCCCCCC
Q 013869 105 SELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGK 184 (435)
Q Consensus 105 ~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 184 (435)
+++.++++.+++++++++.+..... . .... . ......+++.++++|||||||.
T Consensus 82 ~~~~~~~~~~~~~~~i~~~~~~~~~-------------~---~~~~-------~----~~~~~~~~~~~~i~~TSGTTG~ 134 (452)
T PRK07445 82 QEWQQVLNLVQPDQIWGLDQLKLSH-------------P---PPLP-------S----QGILPNLETGWIMIPTGGSSGQ 134 (452)
T ss_pred HHHHHHHHhcCCCEEEecCcccccc-------------C---CCCC-------c----cccCCCCCCcEEEEeCCCCCCC
Confidence 9999999999999999987643210 0 0000 0 0112356899999999999999
Q ss_pred CceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCC
Q 013869 185 PKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGN 264 (435)
Q Consensus 185 pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (435)
||+|.+||+++..++......+++.+ ++.++++|++|.+|+. .++.++..|+++++.+..........
T Consensus 135 PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~---------- 202 (452)
T PRK07445 135 IRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLM-QFMRSFLTGGKLVILPYKRLKSGQEL---------- 202 (452)
T ss_pred CcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHH-HHHHHHHcCCeEEEcChHhccchhhh----------
Confidence 99999999999988888777776654 4678899999999986 58889999999999874333322222
Q ss_pred ccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchh
Q 013869 265 RAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAI 344 (435)
Q Consensus 265 i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~ 344 (435)
..++++|++.++|+++..+++. ....++++|.+++||+++++++.+++.+ ++.++++.||+||++..+
T Consensus 203 ~~~~~~t~~~~vP~~l~~l~~~-----------~~~~l~~l~~i~~gG~~l~~~~~~~~~~-~~~~l~~~YG~TE~~~~~ 270 (452)
T PRK07445 203 PPNPSDFFLSLVPTQLQRLLQL-----------RPQWLAQFRTILLGGAPAWPSLLEQARQ-LQLRLAPTYGMTETASQI 270 (452)
T ss_pred hhhcCceEEEehHHHHHHHHhh-----------ChhhhhcceEEEECCccCCHHHHHHHHh-cCCeEecCcchhhhcccc
Confidence 3357899999999999998762 1124688999999999999999998876 489999999999987544
Q ss_pred ccCCC--CCCCCCccceecCCCeEEEecCCCCCCCCccceEEEecCCccccccCCchhcccccccCCccccCceEEEcCC
Q 013869 345 SNPLR--GARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDED 422 (435)
Q Consensus 345 ~~~~~--~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~d 422 (435)
+.... ......++|+|.|+++++|+ ++..|||+++|+.++.||++++. ..+|||+|||+|++|+|
T Consensus 271 ~~~~~~~~~~~~~~~G~~~p~~~v~i~-------~g~~Gel~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~d~d 337 (452)
T PRK07445 271 ATLKPDDFLAGNNSSGQVLPHAQITIP-------ANQTGNITIQAQSLALGYYPQIL------DSQGIFETDDLGYLDAQ 337 (452)
T ss_pred cccCchhhccCCCcCCccCCCCeEEEc-------CCCcceEEEeCCccchhhcCCcc------CCCCEEECCCEEEEcCC
Confidence 32211 12345689999999999997 23359999999999999997532 24789999999999999
Q ss_pred ccEEEecccccCC
Q 013869 423 GYYIILGRKGIYF 435 (435)
Q Consensus 423 G~l~~~gR~~d~i 435 (435)
|++++.||.||+|
T Consensus 338 G~l~~~GR~dd~I 350 (452)
T PRK07445 338 GYLHILGRNSQKI 350 (452)
T ss_pred CCEEEEeecCCEE
Confidence 9999999999976
No 115
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1e-46 Score=368.26 Aligned_cols=345 Identities=28% Similarity=0.417 Sum_probs=282.8
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHH
Q 013869 28 SYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESEL 107 (435)
Q Consensus 28 Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 107 (435)
||+||.++++++|..|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++
T Consensus 1 Ty~~l~~~~~~~a~~l~~-----------------~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~ 63 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKA-----------------QGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENER 63 (436)
T ss_pred CHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHH
Confidence 899999999999999999 499999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhhhhccCCCCCCcEEEEecCCCCCCCce
Q 013869 108 LHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKG 187 (435)
Q Consensus 108 ~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 187 (435)
..++++++++.+++++........ .. ...... ...............+++++++|||||||.||+
T Consensus 64 ~~~~~~~~~~~~i~~~~~~~~~~~----------~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 128 (436)
T TIGR01923 64 TNQLEDLDVQLLLTDSLLEEKDFQ----------AD-SLDRIE----AAGRYETSLSASFNMDQIATLMFTSGTTGKPKA 128 (436)
T ss_pred HHHHHhcCCCEEEEcCccccccee----------ec-chHhhh----hcccccccccccCCcCceEEEEeCCCCCCCCcE
Confidence 999999999999999864221000 00 000000 000000011224456899999999999999999
Q ss_pred EEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccc
Q 013869 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAG 267 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 267 (435)
|.++|+++...+......+++.++++++...|++|..++. .++.++..|+++++.+.++ .+++. +.+
T Consensus 129 v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~~~~--~~~~~----------l~~ 195 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLS-ILFRWLIEGATLRIVDKFN--QLLEM----------IAN 195 (436)
T ss_pred EEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHH-HHHHHHhcCceEEecchHH--HHHHH----------HHH
Confidence 9999999999999888888999999999999999999886 5899999999999998764 55565 667
Q ss_pred cccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCccccchhccC
Q 013869 268 EAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP 347 (435)
Q Consensus 268 ~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~ 347 (435)
+++|++.++|+++..+++.... .+++|.++++|+++++++.+.+.+ +++++++.||+||++..++..
T Consensus 196 ~~~t~~~~~P~~l~~l~~~~~~------------~~~l~~~~~~G~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~ 262 (436)
T TIGR01923 196 ERVTHISLVPTQLNRLLDEGGH------------NENLRKILLGGSAIPAPLIEEAQQ-YGLPIYLSYGMTETCSQVTTA 262 (436)
T ss_pred hCCeEEEeHHHHHHHHHhCcCC------------CCceEEEEECCCCCCHHHHHHHHH-hCCceeeEecCCccchhccCc
Confidence 9999999999999999875221 167999999999999999998876 499999999999998755432
Q ss_pred CC-CCCCCCccceecCCCeEEEecCCCCCCCCccceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEE
Q 013869 348 LR-GARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYI 426 (435)
Q Consensus 348 ~~-~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~ 426 (435)
.. ......++|.|++++++++.+++.. +.|||+++|+.++.||+++++.+...+ .+|||+|||+|++++||+++
T Consensus 263 ~~~~~~~~~~~G~~~~~~~~~i~~~~~~----~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~dg~~~ 337 (436)
T TIGR01923 263 TPEMLHARPDVGRPLAGREIKIKVDNKE----GHGEIMVKGANLMKGYLYQGELTPAFE-QQGWFNTGDIGELDGEGFLY 337 (436)
T ss_pred CccccccccCCCccCCCcEEEEEeCCCC----CceEEEEECCccchhhCCChhhhhhhh-cCCCeeccceEEEcCCCCEE
Confidence 22 2222235999999999999443222 569999999999999999887776655 57999999999999999999
Q ss_pred EecccccCC
Q 013869 427 ILGRKGIYF 435 (435)
Q Consensus 427 ~~gR~~d~i 435 (435)
+.||.+|+|
T Consensus 338 ~~GR~~d~i 346 (436)
T TIGR01923 338 VLGRRDDLI 346 (436)
T ss_pred EeccccCeE
Confidence 999999975
No 116
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-46 Score=359.63 Aligned_cols=396 Identities=25% Similarity=0.372 Sum_probs=317.9
Q ss_pred HHHhccc-CCCeeEEEeC------CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH
Q 013869 7 AYKKGSM-ARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (435)
Q Consensus 7 ~~~~~~~-~p~~~al~~~------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~ 79 (435)
+.++.+. .++++|++.+ ...+||.|+.+++.++|+.|.+ .|+++||+|++++|+.+
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~-----------------~g~~kGD~V~~~mPm~~ 132 (626)
T KOG1175|consen 70 LDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRK-----------------CGLKKGDTVAIYMPMIP 132 (626)
T ss_pred hhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHh-----------------cCCCCCcEEEEeccCCh
Confidence 3444333 4889999874 2348999999999999999997 59999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH---------HHHHHhccCCccccCC------
Q 013869 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV---------LQNVASKSGAKFSLIP------ 144 (435)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~---------~~~~~~~~~~~~~~~~------ 144 (435)
+++++.+||.++|++.+++-..+++.++...++.++++++++....... ..++............
T Consensus 133 e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~ 212 (626)
T KOG1175|consen 133 EAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVS 212 (626)
T ss_pred HHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEe
Confidence 9999999999999999999999999999999999999999998744322 2222211111000000
Q ss_pred -CCCCCCCccccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHH-HHHHHHHHHHhccCCCCCeeEEeecchh
Q 013869 145 -PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKS-IDAQVQMLTEAWEYTSADQFLHCLPLHH 222 (435)
Q Consensus 145 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~-l~~~~~~~~~~~~~~~~~~~l~~~pl~~ 222 (435)
...+..-........+..++...+.+|+.+|+|||||||.||++.+++.. ++..+......+.++++|++.+.....|
T Consensus 213 ~~~~d~~~~~~~~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GW 292 (626)
T KOG1175|consen 213 RRNRDLFWSLELKKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGW 292 (626)
T ss_pred cccccccHHHHhhhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCe
Confidence 00000000010111112225567789999999999999999999998865 5666666667778999999999999999
Q ss_pred hhHHHHHHHHHHHcCCEEEEcCC--cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhh
Q 013869 223 VHGLFNALLAPLYAGATVEFMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASAS 300 (435)
Q Consensus 223 ~~g~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~ 300 (435)
+.+.+..++++|.+|+++++.+. +++...++. +.+|++|+++..|+.++.+.+...+. ....
T Consensus 293 i~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~----------v~k~~it~l~t~pt~~r~l~~~~~~~------~~~~ 356 (626)
T KOG1175|consen 293 ITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKI----------LDKYKVTVLYTAPTAYRLLRRLGQED------VTSY 356 (626)
T ss_pred eeccchhhhhhhhcCcEEEEEcCCCCChhhhhhh----------HhhcceEEEEeccHHHHHHHHhcccc------cccc
Confidence 99999889999999999999864 466677776 77899999999999999887754332 2223
Q ss_pred hccccEEEEecCCCCCHHHHHHHHHHhCC-cccccccCccccchhccCCCCC--CCCCccceecCCCeEEEecCCCCCCC
Q 013869 301 AAKQLRLMMCGSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGSDA 377 (435)
Q Consensus 301 ~l~~lr~i~~~G~~l~~~l~~~~~~~~~~-~l~~~YG~tE~~~~~~~~~~~~--~~~~~~G~p~~~~~~~i~d~~~~~~~ 377 (435)
++++||.+.+.||++.++.++.|.+.++. +|++.||+||+|..+..+.... .++++.++|.+|+.+.|.|++|+..+
T Consensus 357 ~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~ 436 (626)
T KOG1175|consen 357 SLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELP 436 (626)
T ss_pred ccceEEEEeecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcC
Confidence 44789999999999999999999999987 6999999999998888666655 78999999999999999999999987
Q ss_pred C--ccceEEEecC---CccccccCCchhccccccc--CCccccCceEEEcCCccEEEecccccCC
Q 013869 378 A--GVGEICVKSP---SLFKEYWKLPKVTKDSFTA--DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 378 ~--~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~--~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+ +.|+|+++.+ +.+++|++|++.....+.. .|||.|||.|++|+||+++++||.||+|
T Consensus 437 ~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDvi 501 (626)
T KOG1175|consen 437 PSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVI 501 (626)
T ss_pred CCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccc
Confidence 7 5799999973 7799999999965555544 7899999999999999999999999986
No 117
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.1e-46 Score=370.07 Aligned_cols=343 Identities=19% Similarity=0.187 Sum_probs=256.7
Q ss_pred eCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhh------HHHHHHHHhccCCccccCCC-CC
Q 013869 75 AKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY------REVLQNVASKSGAKFSLIPP-VP 147 (435)
Q Consensus 75 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~~~~~-~~ 147 (435)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+.............+.. ..
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998643 12222221111111111100 00
Q ss_pred --------CCCCccccc---cch-----hhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCC
Q 013869 148 --------NVSSETTVF---DQS-----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSA 211 (435)
Q Consensus 148 --------~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~ 211 (435)
......... ... .........++++++|+|||||||.||||.+||++++.........+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 000000000 000 0001112356899999999999999999999999988776666666788899
Q ss_pred CeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC-cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccc
Q 013869 212 DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (435)
Q Consensus 212 ~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 290 (435)
|++++.+|++|..++. .++.++..|+++++.+. +++..+++. |+++++|++.++|+++..|++....
T Consensus 161 d~~l~~~pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~~----------i~~~~vt~~~~vP~~~~~l~~~~~~- 228 (499)
T PLN03051 161 DVVCWPTNLGWMMGPW-LLYSAFLNGATLALYGGAPLGRGFGKF----------VQDAGVTVLGLVPSIVKAWRHTGAF- 228 (499)
T ss_pred CEEEEccCcceeeehH-HHHHHHHcCCEEEecCCCCCcHHHHHH----------HHHhCCcEEEeCHHHHHHHHhcCcc-
Confidence 9999999999999975 68899999999999874 677777777 6679999999999999998764210
Q ss_pred cHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHh--CCcccccccCccccchhc-cCCCCCCCCCccceecCCCeEE
Q 013869 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVK 367 (435)
Q Consensus 291 ~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~--~~~l~~~YG~tE~~~~~~-~~~~~~~~~~~~G~p~~~~~~~ 367 (435)
.....++++||.+++||+++++++.+.+.+.+ +.++++.||+||++..++ .......+.+++|+|.++++++
T Consensus 229 -----~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 303 (499)
T PLN03051 229 -----AMEGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFV 303 (499)
T ss_pred -----ccccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccCCCCCceEE
Confidence 01223578999999999999999998777633 478999999999864332 2222233567899999999999
Q ss_pred EecCCCCCCCCc---cceEEEecCCc--cccccCCchhccccccc--------CCccccCceEEEcCCccEEEecccccC
Q 013869 368 IAEDESGSDAAG---VGEICVKSPSL--FKEYWKLPKVTKDSFTA--------DGFFKTGDTGKQDEDGYYIILGRKGIY 434 (435)
Q Consensus 368 i~d~~~~~~~~~---~Gel~v~~~~~--~~gy~~~~~~~~~~~~~--------~g~~~TGD~g~~~~dG~l~~~gR~~d~ 434 (435)
|+|++++.++.+ .|||+++|+.+ +.||++++ .++..+++ .+||+|||+|++|+||+|+|+||+||+
T Consensus 304 ivd~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~-~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ 382 (499)
T PLN03051 304 LLNDNGVPYPDDQPCVGEVALAPPMLGASDRLLNAD-HDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDT 382 (499)
T ss_pred EECCCCCCCCCCCCcceEEEEecCcCCCCccccCCc-ccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCE
Confidence 999999887665 69999999976 58999765 33322221 127899999999999999999999998
Q ss_pred C
Q 013869 435 F 435 (435)
Q Consensus 435 i 435 (435)
|
T Consensus 383 i 383 (499)
T PLN03051 383 M 383 (499)
T ss_pred E
Confidence 6
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-45 Score=355.75 Aligned_cols=317 Identities=22% Similarity=0.277 Sum_probs=272.9
Q ss_pred EEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeC
Q 013869 19 AIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPL 98 (435)
Q Consensus 19 al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 98 (435)
+|+..++++||+||.++++++|+.|.. ++++|++|+++++|+++++++++|++++|++++|+
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~~------------------~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l 62 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQF------------------QEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPI 62 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHHc------------------CCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEec
Confidence 467788999999999999999999854 88999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhhhhccCCCCCCcEEEEec
Q 013869 99 ALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYT 178 (435)
Q Consensus 99 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 178 (435)
++..+.+++..++++++++.+++++.... . .. .....++++++++||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------------~---~~---------------~~~~~~~~~~~i~~T 109 (414)
T PRK08308 63 HPDTPKEAAIRMAKRAGCHGLLYGESDFT---------------K---LE---------------AVNYLAEEPSLLQYS 109 (414)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEecCcccc---------------c---cc---------------CCCCCCCCceEEEEC
Confidence 99999999999999999999999763100 0 00 012356889999999
Q ss_pred CCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhh
Q 013869 179 SGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRES 258 (435)
Q Consensus 179 SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~ 258 (435)
|||||.||+|.++|+++..++......++....++++..+|++|.+++...++.++..|+++++.+.+++...++.
T Consensus 110 SGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~---- 185 (414)
T PRK08308 110 SGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNI---- 185 (414)
T ss_pred CCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHH----
Confidence 9999999999999999999988888888888999999999999999987789999999999999999898888887
Q ss_pred cCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHHHhCCcccccccCc
Q 013869 259 YPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMT 338 (435)
Q Consensus 259 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~~l~~~YG~t 338 (435)
++++++|.+.++|.++..+.+.... ..+++.++.+|+++++++.++|++. +.++++.||+|
T Consensus 186 ------l~~~~~t~~~~~P~~~~~l~~~~~~------------~~~l~~~~~~G~~l~~~~~~~~~~~-~~~~~~~YG~t 246 (414)
T PRK08308 186 ------LRNTPQHILYAVPLMLHILGRLLPG------------TFQFHAVMTSGTPLPEAWFYKLRER-TTYMMQQYGCS 246 (414)
T ss_pred ------HHHhCCeEEEcCHHHHHHHHhcCCc------------cccccEEEEccCCCCHHHHHHHHHh-CChhhhccCcc
Confidence 5668999999999999999874321 1358889999999999999999987 67899999999
Q ss_pred cccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCccceEEEecCCccccccCCchhcccccccCCccccCceEE
Q 013869 339 EFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGK 418 (435)
Q Consensus 339 E~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~ 418 (435)
|++.+..... .....++|+|++++++++.++. +..||+++++ .++||+|||+|+
T Consensus 247 E~~~~~~~~~--~~~~~~~G~p~~~~~~~~~~~~-----~~~gel~v~~-------------------~~~~~~TGDl~~ 300 (414)
T PRK08308 247 EAGCVSICPD--MKSHLDLGNPLPHVSVSAGSDE-----NAPEEIVVKM-------------------GDKEIFTKDLGY 300 (414)
T ss_pred ccCCeeecCC--CCCCCccCccCCCeEEEEecCC-----CCCceEEEEc-------------------CCceEECCceEE
Confidence 9986544321 2355789999999999997532 2359999874 258999999999
Q ss_pred EcCCccEEEecccccCC
Q 013869 419 QDEDGYYIILGRKGIYF 435 (435)
Q Consensus 419 ~~~dG~l~~~gR~~d~i 435 (435)
+++||+++++||.+|+|
T Consensus 301 ~~~dg~l~~~GR~~~~i 317 (414)
T PRK08308 301 KSERGTLHFMGRMDDVI 317 (414)
T ss_pred ECCCccEEEecccCCeE
Confidence 99999999999999975
No 119
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.6e-40 Score=351.38 Aligned_cols=372 Identities=13% Similarity=0.095 Sum_probs=271.9
Q ss_pred hHHHHHHHhcccCCCeeEEEeC---C--cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeC
Q 013869 2 EVFKAAYKKGSMARDSVAIRAD---Q--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~---~--~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~ 76 (435)
|+.+.|.+.++++|+++|+... + +++||+|+.++++++|+.|.+ +|+++||+|+|+++
T Consensus 428 Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~-----------------lGV~~GDrVaIls~ 490 (1452)
T PTZ00297 428 SLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLA-----------------LGVRPGDVIGVDCE 490 (1452)
T ss_pred CHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 6788999999999999999631 2 679999999999999999999 59999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCC-C----CC
Q 013869 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN-V----SS 151 (435)
Q Consensus 77 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~ 151 (435)
|+++|+++.+||+++|+++||+++ +.+++.++++.++++++|++.+..+.+.......-..++.+..... . ..
T Consensus 491 N~~Ewvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~ 568 (1452)
T PTZ00297 491 ASRNIVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVAR 568 (1452)
T ss_pred CCHHHHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccc
Confidence 999999999999999999999975 4678999999999999999988877666543321122222221000 0 00
Q ss_pred --------cccc---ccchhhhhccCCCCCCcEEEEe---cCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCee
Q 013869 152 --------ETTV---FDQSQAEKMDGQRGEDPALIVY---TSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQF 214 (435)
Q Consensus 152 --------~~~~---~~~~~~~~~~~~~~~~~~~i~~---TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~ 214 (435)
.... ......+......++|++.|+| ||||||.||||++||+|++.++....... ...++|++
T Consensus 569 ~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~ 648 (1452)
T PTZ00297 569 DLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLM 648 (1452)
T ss_pred cCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEE
Confidence 0000 0000011122346788999986 99999999999999999999998876532 35678999
Q ss_pred EEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHH
Q 013869 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTEL 294 (435)
Q Consensus 215 l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 294 (435)
+.++|++|..+.. ..+.++..|+++.. +++..+++. +++++||++.++|.+|+.+.+.+.+.....
T Consensus 649 Ls~LPLaHI~er~-~~~~~l~~G~~I~~---~d~~~lled----------L~~~rPTv~~~VPrv~ekI~~~i~~~~~~~ 714 (1452)
T PTZ00297 649 VHFTPFAMLFNRV-FVLGLFAHGSAVAT---VDAAHLQRA----------FVKFQPTILVAAPSLFSTSRLQLSRANERY 714 (1452)
T ss_pred EEechHHHHHHHH-HHHHHHHcCCEEEe---CCHHHHHHH----------HHHHCCEEEEecHHHHHHHHHHHHHHhhhh
Confidence 9999999999975 47788999999874 456677777 666999999999999999987653221110
Q ss_pred H----------------------------------HHhhhhccccEEEEecCC--CCCHHHHHHHHHHhCCcccccccCc
Q 013869 295 Q----------------------------------AASASAAKQLRLMMCGSS--ALPLPVMQQWETITGHRLLERYGMT 338 (435)
Q Consensus 295 ~----------------------------------~~~~~~l~~lr~i~~~G~--~l~~~l~~~~~~~~~~~l~~~YG~t 338 (435)
+ +.+......+|.+++||+ +++..+. .++++...||.|
T Consensus 715 ~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~------~~i~i~~g~glT 788 (1452)
T PTZ00297 715 SAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL------EHISVCYVPCLR 788 (1452)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh------CCceEEEecceE
Confidence 0 011112267999999873 4443332 257788899999
Q ss_pred cccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCccceEEEecCCccccccCCchhcccccccCCccccCceEE
Q 013869 339 EFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGK 418 (435)
Q Consensus 339 E~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~ 418 (435)
|.. ..+... .. ...|+|+|+++++|.+++.....+..|||+++ |+++|+.|.+.+ +||+
T Consensus 789 E~~--~~~~~~-~~--~~~G~PlpgvEvKI~~~~E~~~~~~~GEIlvr-------~~kdpe~T~e~~--~gW~------- 847 (1452)
T PTZ00297 789 EVF--FLPSEG-VF--CVDGTPAPSLQVDLEPFDEPSDGAGIGQLVLA-------KKGEPRRTLPIA--AQWK------- 847 (1452)
T ss_pred Eee--eecCCC-Cc--ccCCeecCceEEEEcccccccCCCCCCeEEEE-------ECCChHHHHHhh--CcCc-------
Confidence 943 222222 11 23399999999999974322112346999995 457888888743 5664
Q ss_pred EcCCccEEEecccccCC
Q 013869 419 QDEDGYYIILGRKGIYF 435 (435)
Q Consensus 419 ~~~dG~l~~~gR~~d~i 435 (435)
+||+|+|.||+||+|
T Consensus 848 --~dG~L~IidRkKdli 862 (1452)
T PTZ00297 848 --RDRTLRLLGPPLGIL 862 (1452)
T ss_pred --cCCeEEEEeccccce
Confidence 689999999999986
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.4e-38 Score=323.69 Aligned_cols=386 Identities=25% Similarity=0.368 Sum_probs=313.2
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH
Q 013869 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~ 81 (435)
+++..|.+++...|++.|++..+.++||+|+..+++++|..|.+. |+++++.|+++.+.++++
T Consensus 228 ~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~-----------------g~~~~~~V~i~~~rs~~~ 290 (642)
T COG1020 228 TIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISL-----------------GVGPGETVAILADRSLEL 290 (642)
T ss_pred hHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHc-----------------CCCCCCeEEEEcCCCHHH
Confidence 588999999999999999999999999999999999999999994 889999999999889999
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCCCCccccccchhh
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
++.++|++++|..++|+++.++.+++.++++.+++..+++.......... .+. + ....... . .....
T Consensus 291 i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~----~~~----~-~~~~~~~--~--~~~~~ 357 (642)
T COG1020 291 VVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVG----LPG----L-ALDDALS--E--IPDTD 357 (642)
T ss_pred HHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEecccccccccc----CCc----c-ccccccc--c--CCccC
Confidence 99999999999999999999999999999999999999998432211000 000 0 0000000 0 00000
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEE
Q 013869 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (435)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~ 241 (435)
+......+++.+|++|||||||.||||..+|+++.+...+....+.+...++++...++.+..+.+ .++.++..|++++
T Consensus 358 ~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~-~~f~~l~~G~~l~ 436 (642)
T COG1020 358 PIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVF-EIFGALLEGARLV 436 (642)
T ss_pred cccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHH-HHHHHHhCCCEEE
Confidence 002244568999999999999999999999999999888888888999999999999998887775 6999999999999
Q ss_pred EcCCc---chhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHH
Q 013869 242 FMPKF---SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (435)
Q Consensus 242 ~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~ 318 (435)
+.+.. ++..+... +.++++|.+..+|.++..++.... ........+.+|.+++||+.++..
T Consensus 437 ~~~~~~~~~~~~l~~~----------~~~~~vt~~~~~p~~~~~~~~~~~------~~~~~~~~~~lr~~~~gGe~l~~~ 500 (642)
T COG1020 437 LAPALLQVDPAALLEL----------LEAQGITVLLLVPLLLRLLLLAAL------APDLISPCERLRQLLSGGEALPLA 500 (642)
T ss_pred ecCccccCCHHHHHHH----------HHHcCCEEEEecHHHHHHHHhchh------hccccCCcccccEEEEcCCCCCHH
Confidence 99864 44444444 566899999999999999987410 001111233599999999999999
Q ss_pred HHHHHHHHh--CCcccccccCccccchhccCCCCC--CCCCccceecCCCeEEEecCCCCCCCCc-cceEEEecCCcccc
Q 013869 319 VMQQWETIT--GHRLLERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKE 393 (435)
Q Consensus 319 l~~~~~~~~--~~~l~~~YG~tE~~~~~~~~~~~~--~~~~~~G~p~~~~~~~i~d~~~~~~~~~-~Gel~v~~~~~~~g 393 (435)
+.+++.... ...+.+.||.||+........... ....++|+|++|++++|.|...+.++.+ .||+++.|.+++.|
T Consensus 501 ~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild~~~~~~p~gv~gel~i~g~~~a~g 580 (642)
T COG1020 501 LVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILDQGLRPLPLGVPGELYIAGLGLALG 580 (642)
T ss_pred HHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEECCCCCcCCCCCCeeeEECCcchhhh
Confidence 999998876 468999999999655433211111 1157899999999999999888888888 69999999999999
Q ss_pred ccCCchhcccccccCCccccCceEEEcCCccEEEecccccC
Q 013869 394 YWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIY 434 (435)
Q Consensus 394 y~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~ 434 (435)
|++.++.+...|..+.+|+|||++++.+||.+.+.||.|++
T Consensus 581 y~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~q 621 (642)
T COG1020 581 YLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQ 621 (642)
T ss_pred hcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccce
Confidence 99999999999976559999999999999999999998875
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.5e-32 Score=259.47 Aligned_cols=224 Identities=29% Similarity=0.446 Sum_probs=184.4
Q ss_pred CCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEE---
Q 013869 166 GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEF--- 242 (435)
Q Consensus 166 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~--- 242 (435)
...++++++++|||||||.||+|.++|+++..........+ ...++++..+|++|..++. .++.++..|+++++
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~-~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQ-VLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHH-HHHHHHHcCCeEEecCc
Confidence 34568999999999999999999999999988877655543 4567899999999999986 47888999999887
Q ss_pred cCCcchhHHHHHHHhhcCCCCCccccc--cceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHH
Q 013869 243 MPKFSVRGIWQRWRESYPVNGNRAGEA--ITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (435)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~i~~~~--~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~ 320 (435)
...+++..+++.+ ++++ .++...+|..+..++.... ....++++|.+++||+++++++.
T Consensus 108 ~~~~~~~~~~~~i----------~~~~~~~~~~~~~p~~l~~~~~~~~---------~~~~~~~l~~i~~gG~~l~~~~~ 168 (358)
T PRK07824 108 SAGFDPTALPRAV----------AELGGGRRYTSLVPMQLAKALDDPA---------ATAALAELDAVLVGGGPAPAPVL 168 (358)
T ss_pred CCCcCHHHHHHHH----------HHhCCCceEEEecHHHHHHHHhCcc---------ccCCcccceEEEECCCCCCHHHH
Confidence 3457788887774 4455 5566778888777665321 12357889999999999999999
Q ss_pred HHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCccceEEEecCCccccccCCchh
Q 013869 321 QQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKV 400 (435)
Q Consensus 321 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~ 400 (435)
+.+.+ +++++++.||+||++..+. ..|+|++++++++.+ |||+++|+.++.||+++++.
T Consensus 169 ~~~~~-~~~~v~~~YG~TE~~~~~~----------~~G~~~~g~~v~i~~----------Gei~v~g~~~~~gY~~~~~~ 227 (358)
T PRK07824 169 DAAAA-AGINVVRTYGMSETSGGCV----------YDGVPLDGVRVRVED----------GRIALGGPTLAKGYRNPVDP 227 (358)
T ss_pred HHHHh-cCCcEEecccCCccCCCcC----------cCceeCCCCEEEecC----------CEEEEecCccccccCCCccc
Confidence 99886 4899999999999875432 358999999999954 99999999999999998874
Q ss_pred cccccccCCccccCceEEEcCCccEEEecccccCC
Q 013869 401 TKDSFTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 401 ~~~~~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+ .|..+|||+|||+|++ ++|++++.||.||+|
T Consensus 228 ~--~~~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i 259 (358)
T PRK07824 228 D--PFAEPGWFRTDDLGAL-DDGVLTVLGRADDAI 259 (358)
T ss_pred c--cccCCCceecccEEEE-eCCEEEEEeccCCeE
Confidence 3 4556789999999999 899999999999986
No 122
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.96 E-value=5.1e-26 Score=223.43 Aligned_cols=410 Identities=15% Similarity=0.202 Sum_probs=294.5
Q ss_pred hHHHHHHHhcccCCCeeEEEe------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEe
Q 013869 2 EVFKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (435)
Q Consensus 2 ~i~~~~~~~~~~~p~~~al~~------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~ 75 (435)
+|+|.|+..++.+||++|+.. ..+++||++|+.++.+++..|.++ .-+++||+|++++
T Consensus 771 ~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k----------------~~lk~Gd~V~Lmy 834 (1363)
T KOG3628|consen 771 TILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDK----------------GHLKAGDHVVLMY 834 (1363)
T ss_pred HHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhc----------------ccCCCCCeEEEEc
Confidence 789999999999999999986 347999999999999999999987 5889999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeEEeCCCCCC------HHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccCCCCCCC
Q 013869 76 KPSFEFVAGVLGTWFSGCIAVPLALSYP------ESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV 149 (435)
Q Consensus 76 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (435)
++++|++++++||+.+|.+++|+.|... ...+..+++.+++.+|+++......+..-..........++.+...
T Consensus 835 ~~sie~vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~ 914 (1363)
T KOG3628|consen 835 PPSIEFVAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVL 914 (1363)
T ss_pred CChHHHHHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcc
Confidence 9999999999999999999999987432 2357888999999999999987776654322221222222222222
Q ss_pred CCcc--------ccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecch
Q 013869 150 SSET--------TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLH 221 (435)
Q Consensus 150 ~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~ 221 (435)
+... .........++-...++.+|++-+..-++|.-.++.++|+.+++-.+...+...+.+...++.+.+.+
T Consensus 915 ~~~~~t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~ 994 (1363)
T KOG3628|consen 915 PKLPETIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPY 994 (1363)
T ss_pred cccchhhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCc
Confidence 1111 01111111223344568999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhh
Q 013869 222 HVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASA 301 (435)
Q Consensus 222 ~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 301 (435)
...|++...+..++.|.+.++.++.+.++...+|.+. +++|++.-++.+=..+......++....... ....+
T Consensus 995 sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~------i~~~kvkDt~~~~~tln~c~~~l~t~~enl~-~~gnn 1067 (1363)
T KOG3628|consen 995 SGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQI------ISQYKVKDTYPTYSTLNLCQKGLETSVENLS-KRGNN 1067 (1363)
T ss_pred cchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHH------HhcccccccchhHHHHHHHHhccccccchhh-hhhcc
Confidence 9999998899999999999999998888888888776 8889999999988888888776554333221 22233
Q ss_pred ccccEEEEecCCCCCHHHHHHHHHHh---CC---cccccccCccccchhccCCCC----------------------CC-
Q 013869 302 AKQLRLMMCGSSALPLPVMQQWETIT---GH---RLLERYGMTEFVMAISNPLRG----------------------AR- 352 (435)
Q Consensus 302 l~~lr~i~~~G~~l~~~l~~~~~~~~---~~---~l~~~YG~tE~~~~~~~~~~~----------------------~~- 352 (435)
.++ ..++..-+.....+...|.+.| ++ .+--.|++----.++.....+ ..
T Consensus 1068 ~s~-s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~a 1146 (1363)
T KOG3628|consen 1068 TSS-SIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGA 1146 (1363)
T ss_pred ccc-ceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCC
Confidence 333 4444455566667777777766 22 122233332211122210000 00
Q ss_pred ----CCCccceecCCCeEEEecCCCCC-C-CCccceEEEecCCccccccCCch-hccccc---------ccCCccccCce
Q 013869 353 ----KAGTVGNPLPGVQVKIAEDESGS-D-AAGVGEICVKSPSLFKEYWKLPK-VTKDSF---------TADGFFKTGDT 416 (435)
Q Consensus 353 ----~~~~~G~p~~~~~~~i~d~~~~~-~-~~~~Gel~v~~~~~~~gy~~~~~-~~~~~~---------~~~g~~~TGD~ 416 (435)
.....|+..+++++.|++++.+- + .++.||||+.|.+-+.+|++-.+ .....| .+.+|-||||+
T Consensus 1147 p~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~L 1226 (1363)
T KOG3628|consen 1147 PHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDL 1226 (1363)
T ss_pred CCccccccCCcccccceeEEeCCccccccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeee
Confidence 01123777899999999987655 3 34489999999999888875321 222222 12469999999
Q ss_pred EEEc------CC----ccEEEecccccCC
Q 013869 417 GKQD------ED----GYYIILGRKGIYF 435 (435)
Q Consensus 417 g~~~------~d----G~l~~~gR~~d~i 435 (435)
|++. .+ .-||++|-.++.+
T Consensus 1227 GFl~~t~~t~~~~e~~~~LyVlG~i~Etl 1255 (1363)
T KOG3628|consen 1227 GFLRRTSLTDANVERHDLLYVLGAIDETL 1255 (1363)
T ss_pred eeeeeeecccccceeeeeEEEeeccccee
Confidence 9983 22 3588888777653
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.95 E-value=2.3e-27 Score=224.71 Aligned_cols=206 Identities=21% Similarity=0.241 Sum_probs=162.9
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCC--CCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTS--ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK 245 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~--~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~ 245 (435)
..+..++++|||||||.||+|.++|+++.+.+......++... .+++++++|++|..++.+.++.++..|+++++.+.
T Consensus 93 ~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~ 172 (386)
T TIGR02372 93 STPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAA 172 (386)
T ss_pred CCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCC
Confidence 4467899999999999999999999999998888877777644 46899999999999987778889999999999988
Q ss_pred cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHH
Q 013869 246 FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWET 325 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~ 325 (435)
+++..+++. +.. .|++.++|++++.+.+.. ..+++++. ++||+++++++++.+.+
T Consensus 173 ~~~~~~l~~----------i~~--~t~~~~~P~~l~~l~~~~------------~~l~slr~-i~gGa~l~~~l~~~~~~ 227 (386)
T TIGR02372 173 APASGIMRH----------ARP--GDLIVGTPFIWEQLADLD------------YRLPGVVG-VSSGAPSTAATWRCLLA 227 (386)
T ss_pred CChHHHHHh----------hcc--CCEEEECcHHHHHHHhhC------------cCCCccee-EecCCCCCHHHHHHHHH
Confidence 888777766 332 389999999999997631 23566775 67899999999999988
Q ss_pred HhCC-cccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCccceEEEecCCccccccCCchhcccc
Q 013869 326 ITGH-RLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDS 404 (435)
Q Consensus 326 ~~~~-~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~ 404 (435)
. +. .+++.||+||++++.+.. .+...|.|+|++++++. + |.. .|+
T Consensus 228 ~-g~~~v~~~YG~TEt~~i~~~~-----~~~~~~~~~p~~~~~~~--~--------~~~--~g~---------------- 273 (386)
T TIGR02372 228 A-GLARLLEVYGATETGGIGLRE-----APDDPFRLLPDLACFAD--T--------LSS--AGL---------------- 273 (386)
T ss_pred h-cccchhheecccccccccccc-----CCCCCcccCCCccccCC--C--------ccC--CCc----------------
Confidence 6 54 699999999998755432 12345778888776541 1 110 011
Q ss_pred cccCCccccCceEEEcCCccEEEecccccCC
Q 013869 405 FTADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 405 ~~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
..|++|||+|++|++|++++.||+||+|
T Consensus 274 ---~~~~~tgD~g~~d~~G~l~i~GR~dd~I 301 (386)
T TIGR02372 274 ---ARRLDLQDRLAWDKDGGFTILGRKDEIL 301 (386)
T ss_pred ---cceeecCceEEEcCCCcEEEecccCCEE
Confidence 2368999999999999999999999986
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.95 E-value=1.8e-26 Score=223.73 Aligned_cols=236 Identities=18% Similarity=0.149 Sum_probs=174.4
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHH---HHhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQML---TEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~---~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
..++++++++||||||.||++.++|.++....... ....++.++|++++..+..+..+.+...+.+...|++++.++
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 45678899999999999999999999886654333 334578899998887766544443334667788999999888
Q ss_pred CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHH
Q 013869 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWE 324 (435)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~ 324 (435)
..++..+++. |.++++|++.++|+.+..|++..+... .....+++|.++++|+++++++.+.++
T Consensus 153 ~~~~~~~~~~----------i~~~~~t~l~~~Ps~l~~L~~~~~~~~------~~~~~~~lr~i~~~ge~l~~~~~~~i~ 216 (422)
T TIGR02155 153 GGQTEKQVQL----------IQDFKPDIIMVTPSYMLNLLEELKRMG------IDPAQTSLQVGIFGAEPWTNAMRKEIE 216 (422)
T ss_pred CCCHHHHHHH----------HHHHCCCEEEEcHHHHHHHHHHHHHcC------CCcccCceEEEEEeCCcCCHHHHHHHH
Confidence 7777777777 666999999999999999987532211 001235899999999999999999999
Q ss_pred HHhCCcccccccCccccc--hhccCCCCCCCCCccceecCCCeEEEecC-CCCCCCCc-cceEEEecCCccccccCCchh
Q 013869 325 TITGHRLLERYGMTEFVM--AISNPLRGARKAGTVGNPLPGVQVKIAED-ESGSDAAG-VGEICVKSPSLFKEYWKLPKV 400 (435)
Q Consensus 325 ~~~~~~l~~~YG~tE~~~--~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~~~~~-~Gel~v~~~~~~~gy~~~~~~ 400 (435)
+.|++++++.||+||+++ +...... ...+ ...+.+++.++|+|+ ++..++.+ .|||++++..
T Consensus 217 ~~~g~~v~~~YG~tE~~~~~~~~~~~~--~~~g-~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~~----------- 282 (422)
T TIGR02155 217 ARLGMKATDIYGLSEVIGPGVAMECVE--TQDG-LHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTLT----------- 282 (422)
T ss_pred HHhCCceEecccchhhcCCceeecccc--cCCC-ceEecCeeEEEEECCCCCCCCCCCCeeEEEEecCC-----------
Confidence 999999999999999852 2221110 1111 112234577889994 66676666 7999998732
Q ss_pred cccccccCCccccCceEEEcCC-c-----cEEEecccccCC
Q 013869 401 TKDSFTADGFFKTGDTGKQDED-G-----YYIILGRKGIYF 435 (435)
Q Consensus 401 ~~~~~~~~g~~~TGD~g~~~~d-G-----~l~~~gR~~d~i 435 (435)
...+ ..+||+|||+|+++++ | .+++.||.+|+|
T Consensus 283 -~~~~-p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i 321 (422)
T TIGR02155 283 -KEAL-PVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDML 321 (422)
T ss_pred -cccc-ceeeEEcCcEEEEECCCCCcccccccccCccCCeE
Confidence 2223 3579999999999876 4 578999999986
No 125
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=3.4e-26 Score=200.96 Aligned_cols=207 Identities=18% Similarity=0.176 Sum_probs=157.0
Q ss_pred HHHhcccCCCeeEEEe--C----CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH
Q 013869 7 AYKKGSMARDSVAIRA--D----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (435)
Q Consensus 7 ~~~~~~~~p~~~al~~--~----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~ 80 (435)
|...+.++|+++|++. + ++++||+||.++++++|++|++. .|+++||+|+|+++|+++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~----------------~Gv~~GdrV~i~~~n~~~ 65 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDE----------------LDAEPGSRVALDLPAHWQ 65 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHH----------------hCCCCCCEEEEECCCCHH
Confidence 5677888999999974 2 23699999999999999999972 299999999999999999
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhccCCccccC-----CC-C--CCCCCc
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLI-----PP-V--PNVSSE 152 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-----~~-~--~~~~~~ 152 (435)
++++++||+++|++++|+| .+++++++++++..+.+... ..+..+ .. . ......
T Consensus 66 ~~~~~~a~~~~G~v~vp~n-------------~s~a~~~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 127 (227)
T TIGR03089 66 TAVWLLAAWSTGVEVVLAG-------------DPDADVVVTGPDRLAAAAGS-----GEVVALSLDPLGRRVAGELPPGV 127 (227)
T ss_pred HHHHHHHHHHcCCEEEeCC-------------CCCCCEEEeCcchhhhcccC-----CceEEEeccccccCCCCCCCCcc
Confidence 9999999999999999995 67899999998877764311 111111 00 0 000000
Q ss_pred cccccch----hhhhcc-CCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHH
Q 013869 153 TTVFDQS----QAEKMD-GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF 227 (435)
Q Consensus 153 ~~~~~~~----~~~~~~-~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~ 227 (435)
....... ....+. ...++|++.++||||+ +|.+++.+. ...+++++|+++ .+|++|..|+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~ 193 (227)
T TIGR03089 128 IDFAPEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFL 193 (227)
T ss_pred cchhhhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHH
Confidence 0111101 111111 3456899999999975 566655544 556789999999 99999999998
Q ss_pred HHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCccccccc
Q 013869 228 NALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAIT 271 (435)
Q Consensus 228 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t 271 (435)
..++.++..|++++++++|++..+++. |+++|+|
T Consensus 194 ~~~~~~l~~G~t~v~~~rFd~~~~l~~----------i~~~~vT 227 (227)
T TIGR03089 194 ATLLAPLAAGGSLVLVTHPDPARLDQI----------AETERVT 227 (227)
T ss_pred HHHHHHhccCceEEEecCCCHHHHHHH----------HHhhcCC
Confidence 889999999999999999999999999 5667876
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.88 E-value=1.4e-21 Score=189.80 Aligned_cols=237 Identities=18% Similarity=0.128 Sum_probs=165.7
Q ss_pred CCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
...++++.+.+||||||.||++.+||.++.......... .++.++|+++...|..+..+.....+++...|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 345688899999999999999999999987766554443 48889999999999887766544456677888887654
Q ss_pred CCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHH
Q 013869 244 PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQW 323 (435)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~ 323 (435)
.. ....++. +.++++|.+.++|+.+..+++.+++... ....+++|.+++||++++.++++.+
T Consensus 163 ~~--~~~~~~~----------i~~~~~t~l~~~ps~ll~La~~~~~~g~------~~~~~~lr~ii~gGE~l~~~~r~~i 224 (445)
T TIGR03335 163 GK--CTFPIRI----------IESYRPTGIVASVFKLLRLARRMKAEGI------DPAESSIRRLVVGGESFADESRNYV 224 (445)
T ss_pred Cc--hhHHHHH----------HHHhCCCEEEECHHHHHHHHHHHHHcCC------CcccCcceEEEEcCCCCCHHHHHHH
Confidence 43 2334444 6668999999999998888765332110 0123689999999999999999999
Q ss_pred HHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCC-CCCc-cceEEEecCCccccccCCchhc
Q 013869 324 ETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGS-DAAG-VGEICVKSPSLFKEYWKLPKVT 401 (435)
Q Consensus 324 ~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~-~~~~-~Gel~v~~~~~~~gy~~~~~~~ 401 (435)
.+.|++++++.||+||++....+. .......+-+.+.++|+|+++.. ++.| .|||++.+-... ....
T Consensus 225 e~~~g~~v~~~YG~TE~~~~~~c~-----~~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~------~~r~ 293 (445)
T TIGR03335 225 EELWGCEVYNTYGSTEGTMCGECQ-----AVAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKP------GERC 293 (445)
T ss_pred HHHhCCcEEecCChhhhhheEEec-----CCCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCC------CccC
Confidence 999999999999999986322221 11122233356789999987654 5555 799999864210 0000
Q ss_pred ccccccCCccccCceEEEcC--C---c----cEEEecccccCC
Q 013869 402 KDSFTADGFFKTGDTGKQDE--D---G----YYIILGRKGIYF 435 (435)
Q Consensus 402 ~~~~~~~g~~~TGD~g~~~~--d---G----~l~~~gR~~d~i 435 (435)
...+. -|+|||++++.. . | .+...||.||++
T Consensus 294 ~~Pli---RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~ 333 (445)
T TIGR03335 294 GSLLI---NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETI 333 (445)
T ss_pred CceEE---EeecCceEEEecCCCCCCCCCcceeCCCcccCceE
Confidence 01111 289999999732 2 2 244569999975
No 127
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.83 E-value=5.5e-20 Score=186.56 Aligned_cols=401 Identities=19% Similarity=0.195 Sum_probs=240.4
Q ss_pred HHHHHHhcccCCCeeEEEeC--------CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEe
Q 013869 4 FKAAYKKGSMARDSVAIRAD--------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (435)
Q Consensus 4 ~~~~~~~~~~~p~~~al~~~--------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~ 75 (435)
...+.+.+.+.|...+.... -.+.||.+....++.++..|.+. +...|+.|++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~-----------------~~~~~~~v~i~~ 101 (1032)
T KOG1178|consen 39 EDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSL-----------------GSLRGTTVAIYM 101 (1032)
T ss_pred hhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhc-----------------ccccCceEEEec
Confidence 34566667777777766541 25899999999999999999994 889999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHH---hccCCccccCCCCCCCCCc
Q 013869 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVA---SKSGAKFSLIPPVPNVSSE 152 (435)
Q Consensus 76 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 152 (435)
..+.++++..+|.+++|..+++++|.++.-+....+.+......-...+...++.... .....+.... .. ....
T Consensus 102 ~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv~-~~--~~~f 178 (1032)
T KOG1178|consen 102 LPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKLSVE-TI--ADSF 178 (1032)
T ss_pred cCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHHhhccccccchh-hc--cchh
Confidence 9999999999999999999999999999111111111111111111111111111111 0000000000 00 0000
Q ss_pred cccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHH
Q 013869 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLA 232 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~ 232 (435)
................++..+.+.||||+||.||+|..+|..+.....|....+..+..+++-.....+...... .+..
T Consensus 179 ~~~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~-~~~~ 257 (1032)
T KOG1178|consen 179 QMVLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQ-KFIG 257 (1032)
T ss_pred hhhhccCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchH-HHHh
Confidence 111111122233455678899999999999999999999999999999988888888888764444443333332 3444
Q ss_pred HH-HcCCEEEEcCCcch--hHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHH-----hhhhccc
Q 013869 233 PL-YAGATVEFMPKFSV--RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA-----SASAAKQ 304 (435)
Q Consensus 233 ~l-~~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~-----~~~~l~~ 304 (435)
++ .+|..+..+..... ...+..+ +++|+++....+|++.++++............. .....+.
T Consensus 258 ~~L~~~~~l~~p~~~~~~~~~~l~~~---------le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~ 328 (1032)
T KOG1178|consen 258 ALLFNGNNLLVPTATIKDTPGQLAST---------LERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSC 328 (1032)
T ss_pred hHhhcCceeecccccCccchhhHHHH---------HHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchh
Confidence 44 55555555544443 2333333 677999999999999999887765531111111 1112358
Q ss_pred cEEEEecCCCCCHHHHHHHHHHhCC-cccccccCccccchhc----cCCCCCCCCCccceecCC-------CeEEEecCC
Q 013869 305 LRLMMCGSSALPLPVMQQWETITGH-RLLERYGMTEFVMAIS----NPLRGARKAGTVGNPLPG-------VQVKIAEDE 372 (435)
Q Consensus 305 lr~i~~~G~~l~~~l~~~~~~~~~~-~l~~~YG~tE~~~~~~----~~~~~~~~~~~~G~p~~~-------~~~~i~d~~ 372 (435)
|+...++|++...+++..+.+.+.. -...-|+.++..+-++ .+.........++.+..+ +-..+....
T Consensus 329 Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~~~ 408 (1032)
T KOG1178|consen 329 LKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLYRA 408 (1032)
T ss_pred heeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeeecc
Confidence 9999999999999999977766522 2223488888765443 222211122222222211 222333333
Q ss_pred CCCCCCcc-----ceEEEecCCccccccCCchhccccc-----ccCCccccCceEEEcCCccEEEecccccCC
Q 013869 373 SGSDAAGV-----GEICVKSPSLFKEYWKLPKVTKDSF-----TADGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 373 ~~~~~~~~-----Gel~v~~~~~~~gy~~~~~~~~~~~-----~~~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+.++.+.+ |.-+.-+..+..|| ..++.....+ ..+.+|+|||+|+..++|.+.+.||.|++|
T Consensus 409 ~~~~~~~v~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qI 480 (1032)
T KOG1178|consen 409 GGEGEGGVGKGCLGAEQNLSSWVVDGY-STPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQI 480 (1032)
T ss_pred CcccCCcccceeecccccccceeeccc-cchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceE
Confidence 44443332 22222234444553 2222222211 113589999999998999999999999975
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.77 E-value=1.8e-17 Score=153.74 Aligned_cols=237 Identities=19% Similarity=0.149 Sum_probs=171.3
Q ss_pred CCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEE
Q 013869 166 GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEF 242 (435)
Q Consensus 166 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~ 242 (435)
..+.++...|..||||||.|+-+.+++..+......++..+ +...+|++..+.-..-..|-....+++-..|.+++-
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 44556777799999999999999999998777666666654 677888876665532222222335566667777777
Q ss_pred cCCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHH
Q 013869 243 MPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQ 322 (435)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~ 322 (435)
..+-+.+..... +..+++|++.++|+.+..|++.+++... ...-.++|.+++|+|++++++++.
T Consensus 166 ~~~g~~~~~~~l----------~~df~~tvI~~tps~~l~lae~~~~~G~------~~~~~~lk~~i~gaE~~see~R~~ 229 (438)
T COG1541 166 ISGGNTERQLEL----------MKDFKPTVIAATPSYLLYLAEEAEEEGI------DPDKLSLKKGIFGAEPWSEEMRKV 229 (438)
T ss_pred cCCccHHHHHHH----------HHhcCCcEEEEChHHHHHHHHHHHHcCC------ChhhcceeEEEEecccCCHHHHHH
Confidence 766566777777 5669999999999999999998765531 123367999999999999999999
Q ss_pred HHHHhCCcccccccCccccchh-ccCCCCCCCCCccceecCCCeEEEecCC-CCCCCCc-cceEEEecCCccccccCCch
Q 013869 323 WETITGHRLLERYGMTEFVMAI-SNPLRGARKAGTVGNPLPGVQVKIAEDE-SGSDAAG-VGEICVKSPSLFKEYWKLPK 399 (435)
Q Consensus 323 ~~~~~~~~l~~~YG~tE~~~~~-~~~~~~~~~~~~~G~p~~~~~~~i~d~~-~~~~~~~-~Gel~v~~~~~~~gy~~~~~ 399 (435)
+.+.|++..++.||+||..+.. .... ......-+-+...+.|+|++ +...+.+ .|||++..=. +
T Consensus 230 ie~~~g~~~~diYGltE~~g~g~~eC~----~~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~--~------- 296 (438)
T COG1541 230 IENRFGCKAFDIYGLTEGFGPGAGECT----ERNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITTLT--K------- 296 (438)
T ss_pred HHHHhCCceeeccccccccCCcccccc----cccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEecc--c-------
Confidence 9999999999999999986653 2111 11123334466888999955 4556666 5999987522 0
Q ss_pred hcccccccCCccccCceEEEcCC----c-----cEEEecccccCC
Q 013869 400 VTKDSFTADGFFKTGDTGKQDED----G-----YYIILGRKGIYF 435 (435)
Q Consensus 400 ~~~~~~~~~g~~~TGD~g~~~~d----G-----~l~~~gR~~d~i 435 (435)
....+. -|+|||++++.++ | ...+.||.+|+|
T Consensus 297 -~~~PlI---RYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l 337 (438)
T COG1541 297 -EGMPLI---RYRTGDITVILSDPCGCGRTHRRIERIEGRSDDML 337 (438)
T ss_pred -cCcceE---EEEcCCeeEecccCCCCCCccccccccCcccccEE
Confidence 001111 3999999999763 3 267789999975
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.72 E-value=1.2e-16 Score=158.22 Aligned_cols=399 Identities=21% Similarity=0.174 Sum_probs=267.7
Q ss_pred HHHHHHHhcccCCCeeEEEeC-----CcccCHHHHHHHHHHHHH-HHhhCCCCCccccccccccccccCCCCCeEEEEeC
Q 013869 3 VFKAAYKKGSMARDSVAIRAD-----QKSYSYDQLASSALRISS-LLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (435)
Q Consensus 3 i~~~~~~~~~~~p~~~al~~~-----~~~~Ty~el~~~~~~la~-~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~ 76 (435)
+...+...-+.++-..|.|.- ...+||..+..++.+.|+ .|.+ .|+.++|+|.+++.
T Consensus 96 ~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~k-----------------sgl~~~~~vvL~Y~ 158 (1363)
T KOG3628|consen 96 IIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNK-----------------SGLKPGDRVVLYYR 158 (1363)
T ss_pred hHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhc-----------------cCCCCCcEEEEEEE
Confidence 445555566777777777752 258999999999999999 5555 49999999999998
Q ss_pred CC--HHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHH-hccCCccccCCCCCCCCCcc
Q 013869 77 PS--FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVA-SKSGAKFSLIPPVPNVSSET 153 (435)
Q Consensus 77 ~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 153 (435)
.+ .++++..++|...|.+.+|+.+..+-+++..+++..+.+++++.......+.... +....+-..++...+..
T Consensus 159 ~~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~w~t~~~k--- 235 (1363)
T KOG3628|consen 159 KCEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAWWKTNDFK--- 235 (1363)
T ss_pred hhhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHhhhccccc---
Confidence 88 9999999999999999999999999999999999999999999987665543322 10000000000111111
Q ss_pred ccccchhhhhccCCCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHH--------------------HhccCCCCCe
Q 013869 154 TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT--------------------EAWEYTSADQ 213 (435)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~--------------------~~~~~~~~~~ 213 (435)
..-.......+...-. ..+|-||.+++|.--+++.+|. ++.+.+... ..+++..++.
T Consensus 236 -~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~ 312 (1363)
T KOG3628|consen 236 -GNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDV 312 (1363)
T ss_pred -ceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccc
Confidence 0011111122223333 8999999999999999999987 444333322 1223456777
Q ss_pred eEEeecchhhhHHHHHHHHHHHcCCEEEEcCC---cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccc
Q 013869 214 FLHCLPLHHVHGLFNALLAPLYAGATVEFMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (435)
Q Consensus 214 ~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 290 (435)
++....+....|++.+++.++++|.|.+.+|+ ..+-.+... +.+++.++++.--..++.....+.+.
T Consensus 313 ~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l----------~~k~R~~~~ltd~~~Lkq~~~ny~~~ 382 (1363)
T KOG3628|consen 313 LLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANL----------ITKYRATWSLTDYAGLKQPVYNYQED 382 (1363)
T ss_pred eeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhh----------hccceeEEEeecccccCcccccccCC
Confidence 88888888888888899999999999999987 333333333 78899999999877777777665544
Q ss_pred cHHHHH---HhhhhccccEEEEecCCCCCHHHHHHHHHHh----CCc------------------ccccccCccccchhc
Q 013869 291 DTELQA---ASASAAKQLRLMMCGSSALPLPVMQQWETIT----GHR------------------LLERYGMTEFVMAIS 345 (435)
Q Consensus 291 ~~~~~~---~~~~~l~~lr~i~~~G~~l~~~l~~~~~~~~----~~~------------------l~~~YG~tE~~~~~~ 345 (435)
+.+... ....+++++|.++.....++.+...-....+ |.. ....-+.+|.+...-
T Consensus 383 p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~ 462 (1363)
T KOG3628|consen 383 PKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSI 462 (1363)
T ss_pred cccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccc
Confidence 332222 2224799999999999999988655544332 211 111111223222211
Q ss_pred cCCCC------------------------------CCCCCccceecCC-CeEEEecCCCCC-C-CCccceEEEecCCccc
Q 013869 346 NPLRG------------------------------ARKAGTVGNPLPG-VQVKIAEDESGS-D-AAGVGEICVKSPSLFK 392 (435)
Q Consensus 346 ~~~~~------------------------------~~~~~~~G~p~~~-~~~~i~d~~~~~-~-~~~~Gel~v~~~~~~~ 392 (435)
..... ....-.+|+..|| +.+.+++++.+. + .+++|||||.+++..+
T Consensus 463 r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~ 542 (1363)
T KOG3628|consen 463 RRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGK 542 (1363)
T ss_pred cCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCccc
Confidence 11110 0001123454444 556777777655 4 4448999999999999
Q ss_pred cccCCchhccccccc------------CCccccCceEEEcCCccEEEecccccCC
Q 013869 393 EYWKLPKVTKDSFTA------------DGFFKTGDTGKQDEDGYYIILGRKGIYF 435 (435)
Q Consensus 393 gy~~~~~~~~~~~~~------------~g~~~TGD~g~~~~dG~l~~~gR~~d~i 435 (435)
+|+.-+..|...|.. ..|.+||=+||+ .+|.+|++|=+.|.+
T Consensus 543 ~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv-~~gki~vl~~k~d~l 596 (1363)
T KOG3628|consen 543 LFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFV-HNGKIYVLGLKEDGL 596 (1363)
T ss_pred ceeeccccccceEEeeeccccCCCCccchhhhhcceeee-eCCeEEEEEechhhh
Confidence 999877777766611 238999999999 668888888776653
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.41 E-value=5.4e-12 Score=120.38 Aligned_cols=214 Identities=12% Similarity=0.092 Sum_probs=128.0
Q ss_pred CcEEEEecCCCCCCCceEEeehHHHHHHHHHH-HHhc--cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCE-EEEcCC-
Q 013869 171 DPALIVYTSGTTGKPKGVVHTHKSIDAQVQML-TEAW--EYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT-VEFMPK- 245 (435)
Q Consensus 171 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~-~~~~--~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~-~~~~~~- 245 (435)
.-..+..||||||.|-.+..+........... .... +...++++...+.- .+ .++..+.+... +...+-
T Consensus 100 ~~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~---~~---~ly~~~~~~~~~~~~~~l~ 173 (430)
T TIGR02304 100 GNISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRA---DN---NLYQSVNNRWISLDFFDLL 173 (430)
T ss_pred CcEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEcc---Ch---hHHHHHHhccceeeecCCC
Confidence 44567789999999999999987653332222 2222 44555554443211 10 12222322211 222211
Q ss_pred cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEEecCCCCCHHHHHHHHH
Q 013869 246 FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWET 325 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~~~G~~l~~~l~~~~~~ 325 (435)
.+.+..++. |.+++|+.+.+.|+.+..|++..++.. .. ..++.++++||.++++..+.+++
T Consensus 174 ~~~~~~l~~----------L~~~~P~~L~g~pS~l~~LA~~~~~~~--------l~-~~~k~ii~~~E~l~~~~r~~Ie~ 234 (430)
T TIGR02304 174 APFQAHIKR----------LNQRKPSIIVAPPSVLRALALEVMEGE--------LT-IKPKKVISVAEVLEPQDRELIRN 234 (430)
T ss_pred cCHHHHHHH----------HHHhCCCEEEEcHHHHHHHHHHHHhcC--------CC-CCceEEEEccCCCCHHHHHHHHH
Confidence 234445555 677999999999999999998644211 11 36899999999999999999999
Q ss_pred HhCCcccccccCccccchhccCCCCCCCCCccceecC-C--CeEEEecCCCCCCCCccceEEEecCCccccccCCchhcc
Q 013869 326 ITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLP-G--VQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTK 402 (435)
Q Consensus 326 ~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~-~--~~~~i~d~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 402 (435)
.||+++++.||+|| |.+++.... +.. ...+ . +|..++|+++. +..++.+ +.+. .
T Consensus 235 ~fg~~V~~~YG~tE-g~la~eC~~-----g~l-Hl~ed~~~vE~~ivD~~~~------~~~ViT~------L~n~----~ 291 (430)
T TIGR02304 235 VFKNTVHQIYQATE-GFLASTCRC-----GTL-HLNEDLVHIEKQYLDEHKR------FVPIITD------FTRT----T 291 (430)
T ss_pred HhCCCeeEccCCch-hheEEecCC-----CCE-EEccccEEEEeeEECCCCc------eEEEEec------CCCc----c
Confidence 99999999999999 544433211 111 2222 2 33337887642 2333322 2211 1
Q ss_pred cccccCCccccCceEEEcCC----cc----E-EEecccccCC
Q 013869 403 DSFTADGFFKTGDTGKQDED----GY----Y-IILGRKGIYF 435 (435)
Q Consensus 403 ~~~~~~g~~~TGD~g~~~~d----G~----l-~~~gR~~d~i 435 (435)
..+. -|+|||++.+.++ |. | .+.||.+|+|
T Consensus 292 ~PlI---RYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l 330 (430)
T TIGR02304 292 QPIV---RYRLNDILVESEQPCSCGSATMAIERIEGRQDDIF 330 (430)
T ss_pred ceEE---eeeCCCEEEeCCCCCCCCCcccccCCccCccCCEE
Confidence 1111 2899999988543 32 3 3789999874
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.84 E-value=7.1e-07 Score=83.58 Aligned_cols=233 Identities=20% Similarity=0.277 Sum_probs=138.1
Q ss_pred CCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhcc----CCC-CCeeEEeecchhhh-HH---HHHHHHHHHcC
Q 013869 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE----YTS-ADQFLHCLPLHHVH-GL---FNALLAPLYAG 237 (435)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~----~~~-~~~~l~~~pl~~~~-g~---~~~~~~~l~~G 237 (435)
...+++..++.||||||.|.-+.+.+..+..+.......++ ... ...++...|-.... .+ .......+..+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 44567888999999999987777776666555544433322 221 22344444442211 11 11233334455
Q ss_pred CEEEEc-CCcchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhcc-ccEEEEecC---
Q 013869 238 ATVEFM-PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK-QLRLMMCGS--- 312 (435)
Q Consensus 238 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~-~lr~i~~~G--- 312 (435)
+...+- ..++.+.....+.+. ..+.++..+++.|.++..++..+++... ...++ ..+.+..||
T Consensus 166 ~~~~l~~~~ld~~~~~~~L~~~------~~~~~pv~l~Gftf~~~~~~~~l~~~~~------~~~L~~~s~vi~~GGwK~ 233 (365)
T PF04443_consen 166 SRFALDNDELDLEGLIEALFRA------EHSGEPVLLFGFTFFIWFLLDELEERGI------RFRLPKGSIVIHGGGWKG 233 (365)
T ss_pred ceeeecCCccCHHHHHHHHHHH------HhCCCCEEEECchHHHHHHHHHHHhcCC------cccCCCCCEEEeCCCCCc
Confidence 554442 235667666666543 3557899999999988888776543321 11232 456666665
Q ss_pred ---CCCC-HHHHHHHHHHhCC----cccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCC-CCCCCc-cce
Q 013869 313 ---SALP-LPVMQQWETITGH----RLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDES-GSDAAG-VGE 382 (435)
Q Consensus 313 ---~~l~-~~l~~~~~~~~~~----~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~-~~~~~~-~Ge 382 (435)
+.++ .++.+.+++.||+ .+++.||+||.....+...... . +.|.- +.|.|+.+ .+++.| .|-
T Consensus 234 ~~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~-~------~~p~w-V~iRDp~tl~~~~~Ge~Gl 305 (365)
T PF04443_consen 234 RRKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGHGH-F------HVPPW-VIIRDPETLEPLPPGETGL 305 (365)
T ss_pred cccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCCCc-c------cCCCe-EEEECCCCCcCCCCCCeeE
Confidence 3354 4667777888887 7899999999865544332111 1 11111 66667654 445555 798
Q ss_pred EEEecCCccccccCCchhcccccccCCccccCceEEEcCC--------ccEEEeccccc
Q 013869 383 ICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDED--------GYYIILGRKGI 433 (435)
Q Consensus 383 l~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~d--------G~l~~~gR~~d 433 (435)
|.+-++... .| -+...|.|+|.+..+ .++.++||.+.
T Consensus 306 i~vidl~~~-s~-------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 306 IQVIDLANT-SY-------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred EEEEccccc-CC-------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 988765421 11 244789999988654 27999999864
No 132
>PRK09188 serine/threonine protein kinase; Provisional
Probab=97.48 E-value=7.3e-05 Score=70.18 Aligned_cols=26 Identities=15% Similarity=0.197 Sum_probs=24.4
Q ss_pred cCCccccCceEEE-cCCccEEEecccc
Q 013869 407 ADGFFKTGDTGKQ-DEDGYYIILGRKG 432 (435)
Q Consensus 407 ~~g~~~TGD~g~~-~~dG~l~~~gR~~ 432 (435)
++|||+|||+|++ |+||+|+|.||.+
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~ 233 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG 233 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc
Confidence 5899999999998 7999999999987
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=97.16 E-value=0.00089 Score=66.60 Aligned_cols=114 Identities=15% Similarity=0.165 Sum_probs=60.1
Q ss_pred hhhccccEEEEecCCCCCHHHHHHHHHHhCC--cccccccCccccchhccCCCCCCCCCccceecCCC-eEEEecCC--C
Q 013869 299 ASAAKQLRLMMCGSSALPLPVMQQWETITGH--RLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGV-QVKIAEDE--S 373 (435)
Q Consensus 299 ~~~l~~lr~i~~~G~~l~~~l~~~~~~~~~~--~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~-~~~i~d~~--~ 373 (435)
..-+|.|+.+.+.+..-...-.+.+++.++- .+...|++||+-+.+-.. .....+...++. -.+-++.+ +
T Consensus 263 ~~lWP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i~i~~~-----~~~~~~~l~~~~~ffEFip~~~~~ 337 (528)
T PF03321_consen 263 KRLWPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFIGIPLD-----PEDPGYVLAPDSGFFEFIPVDEDE 337 (528)
T ss_dssp HHHSTT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEEEEES------CCC--EEE-TTSSEEEEEE-STT-
T ss_pred HHhCCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEEEEecC-----CCCCceEeecCCeEEEEEeccCCc
Confidence 4458999988887777777778888888853 344699999964322221 111222333321 23333322 1
Q ss_pred -------CC-----C-CCccceEEEecCCccccccCCchhcccccccCCccccCceEEEcC--Cc--cEEEecccccC
Q 013869 374 -------GS-----D-AAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDE--DG--YYIILGRKGIY 434 (435)
Q Consensus 374 -------~~-----~-~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~--dG--~l~~~gR~~d~ 434 (435)
+. + .+..-||.+...+ |.| -|+.||++++.. ++ .+.|.||.+.+
T Consensus 338 ~~~~~~~~~l~~~ele~G~~YelviTt~~---GLy--------------RY~iGDvVrv~gf~~~~P~i~F~~R~~~~ 398 (528)
T PF03321_consen 338 QNPSEQPKTLLLHELEVGEEYELVITTNS---GLY--------------RYRIGDVVRVTGFYNQTPRIEFVGRRGQV 398 (528)
T ss_dssp ------SSSEEGGG--TT-EEEEEEESTT---S-S--------------SEEECEEEEEEEEETTEEEEEEEEETTEE
T ss_pred ccccCCCceecHHHhcCCCeEEEEEeccc---cee--------------eeecCCEEEEeeccCCCcEEEEeccCCce
Confidence 11 1 1113455555421 221 289999999943 34 69999999853
No 134
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=96.72 E-value=0.047 Score=54.47 Aligned_cols=43 Identities=9% Similarity=0.028 Sum_probs=31.7
Q ss_pred hhhccccEEEEecCCCCCHHHHHHHHHHh-CCcccc-cccCcccc
Q 013869 299 ASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLLE-RYGMTEFV 341 (435)
Q Consensus 299 ~~~l~~lr~i~~~G~~l~~~l~~~~~~~~-~~~l~~-~YG~tE~~ 341 (435)
..-+|+++.|-+....-...-...++..+ ++++.. .|++||+.
T Consensus 300 ~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~ 344 (612)
T PLN02620 300 TRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECY 344 (612)
T ss_pred HHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceE
Confidence 34578999998877777777777776655 566554 99999964
No 135
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=96.67 E-value=0.27 Score=49.32 Aligned_cols=43 Identities=12% Similarity=0.071 Sum_probs=32.1
Q ss_pred hhhccccEEEEecCCCCCHHHHHHHHHHh-CCcccc-cccCcccc
Q 013869 299 ASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLLE-RYGMTEFV 341 (435)
Q Consensus 299 ~~~l~~lr~i~~~G~~l~~~l~~~~~~~~-~~~l~~-~YG~tE~~ 341 (435)
..-+|.++.|.+....-...-...++..+ +++++. .|++||+.
T Consensus 289 ~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~ 333 (606)
T PLN02247 289 KRLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECY 333 (606)
T ss_pred HHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceE
Confidence 34678999999877777777777777655 566554 99999964
No 136
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=95.73 E-value=0.23 Score=49.99 Aligned_cols=31 Identities=23% Similarity=0.213 Sum_probs=25.7
Q ss_pred CCCCCCcEEEEecCCCC-CCCceEEeehHHHH
Q 013869 166 GQRGEDPALIVYTSGTT-GKPKGVVHTHKSID 196 (435)
Q Consensus 166 ~~~~~~~~~i~~TSGtT-G~pK~v~~t~~~l~ 196 (435)
...++.+.++..||||| |.+|-|.+|...+-
T Consensus 96 vL~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 96 ILSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eeCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 35567788999999999 88999999986553
No 137
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.15 E-value=0.24 Score=47.39 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=77.7
Q ss_pred ccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHHHHHHHHHHHhCCeEEeCCCCCC
Q 013869 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSYP 103 (435)
Q Consensus 26 ~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~ 103 (435)
-+|+.|....+..+|+.|.. +|+.+||+|.....-+ ..-+...+|+.++|+.++|+.+. .
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~-----------------~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~ 170 (438)
T COG1541 109 GYTAKDIERWAELLARSLYS-----------------AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-N 170 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHH-----------------ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-c
Confidence 58999999999999999999 6999999999987722 12267889999999999999884 3
Q ss_pred HHHHHHHHhcCCccEEEechhhHHHHHHHHhcc
Q 013869 104 ESELLHVMHDSDISMVLSTEDYREVLQNVASKS 136 (435)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~ 136 (435)
-+.-..++++.++.++.+.+.+.-.+.+...+.
T Consensus 171 ~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~ 203 (438)
T COG1541 171 TERQLELMKDFKPTVIAATPSYLLYLAEEAEEE 203 (438)
T ss_pred HHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHc
Confidence 445578899999999999999988777766654
No 138
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=85.60 E-value=8.6 Score=37.34 Aligned_cols=89 Identities=15% Similarity=0.205 Sum_probs=65.9
Q ss_pred ccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH--HHHHHHHHHHHhCCeEEeCCCCCC
Q 013869 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSYP 103 (435)
Q Consensus 26 ~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~ 103 (435)
.+|..++......++..+.. +|+++||++....+.+. ......++++..|+.+++++...
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~-----------------~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~- 155 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRA-----------------AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ- 155 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHH-----------------cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-
Confidence 46777777666666666665 48899999887665442 22334677889999999987654
Q ss_pred HHHHHHHHhcCCccEEEechhhHHHHHHH
Q 013869 104 ESELLHVMHDSDISMVLSTEDYREVLQNV 132 (435)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (435)
.+.+...+++.++.+++..+.....+...
T Consensus 156 ~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~ 184 (422)
T TIGR02155 156 TEKQVQLIQDFKPDIIMVTPSYMLNLLEE 184 (422)
T ss_pred HHHHHHHHHHHCCCEEEEcHHHHHHHHHH
Confidence 46788899999999999999887665543
No 139
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=84.10 E-value=12 Score=36.66 Aligned_cols=84 Identities=13% Similarity=0.048 Sum_probs=62.7
Q ss_pred ccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH--HHHHHHHHHHhCCeEEeCCCCCC
Q 013869 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSYP 103 (435)
Q Consensus 26 ~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~ 103 (435)
-+|..++...+...+..+.. +|+.+||++.+..+.+.. .....+|++.+|+.++|...
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~-----------------~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~--- 164 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVS-----------------QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK--- 164 (445)
T ss_pred eecHHHHHHHHHHHHHHHHH-----------------cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---
Confidence 47889998888888877776 489999999998876532 23456788899998887643
Q ss_pred HHHHHHHHhcCCccEEEechhhHHHH
Q 013869 104 ESELLHVMHDSDISMVLSTEDYREVL 129 (435)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (435)
......++++.++.+++..+...-.+
T Consensus 165 ~~~~~~~i~~~~~t~l~~~ps~ll~L 190 (445)
T TIGR03335 165 CTFPIRIIESYRPTGIVASVFKLLRL 190 (445)
T ss_pred hhHHHHHHHHhCCCEEEECHHHHHHH
Confidence 23456788999999998877655443
No 140
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=80.47 E-value=16 Score=36.24 Aligned_cols=86 Identities=19% Similarity=0.209 Sum_probs=64.7
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH--HHHHHHHHHHHhCCeEEeCCCCC
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSY 102 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~ 102 (435)
..+|+..+...+..+... .++++++++....+... .+...+++++..|+.+++. +..
T Consensus 184 v~~s~~~l~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~ 242 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEY--------------------LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVF 242 (513)
T ss_pred EEEecHHHHHHHHHHHHh--------------------hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcC
Confidence 368888887665554333 36788999988877542 3345578899999988875 556
Q ss_pred CHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 103 PESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
+.+.+...+++.++.++...+.....+..
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 271 (513)
T PRK07656 243 DPDEVFRLIETERITVLPGPPTMYNSLLQ 271 (513)
T ss_pred CHHHHHHHHHHhCCeEEechHHHHHHHHc
Confidence 78889999999999999999988776554
No 141
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=77.99 E-value=17 Score=34.98 Aligned_cols=88 Identities=23% Similarity=0.109 Sum_probs=61.9
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.+|++. -....+|++++...+..++..+ ++..++++....|-+... +..+++++..|+.++.++
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~--~~~~~A~~~~G~~~v~l~ 77 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEF--VVAFLACLRAGAIPVPLD 77 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHH--HHHHHHHHHTT-EEEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcccee--eeeecccccccccccccc
Confidence 567777766 2345789998888777766544 678899888888886433 346889999999999987
Q ss_pred Cc-chhHHHHHHHhhcCCCCCccccccceecc
Q 013869 245 KF-SVRGIWQRWRESYPVNGNRAGEAITAFTG 275 (435)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 275 (435)
+. ........ +++.+++.++.
T Consensus 78 ~~~~~~~~~~~----------l~~~~~~~ii~ 99 (417)
T PF00501_consen 78 PSLSEDELRHI----------LRQSGPKVIIT 99 (417)
T ss_dssp TTSSHHHHHHH----------HHHHTESEEEE
T ss_pred ccccccccccc----------ccccceeEEEE
Confidence 64 44554444 44568888885
No 142
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=77.68 E-value=29 Score=34.47 Aligned_cols=85 Identities=11% Similarity=0.038 Sum_probs=64.0
Q ss_pred ccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH-HHHHHHHHHHHhCCeEEeCCCCCCH
Q 013869 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYPE 104 (435)
Q Consensus 26 ~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~ 104 (435)
.+|+..+...+.....+ .+++++|++....+... ..+...++++..|+..+..+.. +.
T Consensus 186 ~~t~~~l~~~~~~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~ 244 (521)
T PRK06187 186 VLSHRNLFLHSLAVCAW--------------------LKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DP 244 (521)
T ss_pred EeehHHHHHHHHHHHHh--------------------hCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CH
Confidence 57888887666655552 47889999988877553 3344455688889988877654 88
Q ss_pred HHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 105 SELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 105 ~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
+.+...+++.++..+++.+.....+..
T Consensus 245 ~~~~~~l~~~~~t~l~~~p~~~~~l~~ 271 (521)
T PRK06187 245 ENLLDLIETERVTFFFAVPTIWQMLLK 271 (521)
T ss_pred HHHHHHHHHhCCeEEEchHHHHHHHHc
Confidence 889999999999999999987776544
No 143
>PRK08315 AMP-binding domain protein; Validated
Probab=74.57 E-value=35 Score=34.40 Aligned_cols=85 Identities=12% Similarity=0.069 Sum_probs=62.0
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHHHHHHHHHHHhCCeEEeCCCCC
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSY 102 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~ 102 (435)
..+|...+...+..+... ++++++|++....+-. ..++..+++++..|+..+......
T Consensus 217 v~~s~~~l~~~~~~~~~~--------------------~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~ 276 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA--------------------MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGF 276 (559)
T ss_pred EEeeHHHHHHHHHHHHHh--------------------cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCC
Confidence 467888776555544332 4778899998777753 344556788888898888555666
Q ss_pred CHHHHHHHHhcCCccEEEechhhHHHH
Q 013869 103 PESELLHVMHDSDISMVLSTEDYREVL 129 (435)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (435)
.+..+...+++.++.+++..+.....+
T Consensus 277 ~~~~~~~~l~~~~~t~~~~~P~~~~~~ 303 (559)
T PRK08315 277 DPLATLAAVEEERCTALYGVPTMFIAE 303 (559)
T ss_pred CHHHHHHHHHHcCCeEEecchHHHHHH
Confidence 788889999999999999988766543
No 144
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=73.90 E-value=41 Score=33.86 Aligned_cols=98 Identities=11% Similarity=0.110 Sum_probs=68.3
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHHH
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~~ 82 (435)
.|+.+|++. ++..+|++.+...+...... .++.++|++...+|-. .-+.
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~--------------------~~~~~~d~~l~~~p~~h~~g~~ 240 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKF--------------------FSPKEDDVMMSFLPPFHAYGFN 240 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh--------------------cCCCCCceEEEecchHhhhhhH
Confidence 457777764 23468988887655444332 3667789888777643 2222
Q ss_pred HHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
...+..+..|+..+.......++.+...+++.++.++...+.....+..
T Consensus 241 ~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 289 (539)
T PRK06334 241 SCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILK 289 (539)
T ss_pred HHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHH
Confidence 3456777888887765545678889999999999999999988776654
No 145
>PLN02736 long-chain acyl-CoA synthetase
Probab=72.71 E-value=89 Score=32.38 Aligned_cols=86 Identities=7% Similarity=-0.155 Sum_probs=62.7
Q ss_pred EEeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC-cchhHHHHHHHhhcCCCC
Q 013869 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (435)
..+|++.+...+..++.. .++.++|++...++-+--.- ..+++++..|+.++..+. +....+...
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~i--------- 145 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL--IVDHACSAYSYVSVPLYDTLGPDAVKFI--------- 145 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEeecCCCHHHHHHH---------
Confidence 457999988877776654 47899999988888765443 357888999999987765 445554444
Q ss_pred CccccccceeccccHHHHHHHh
Q 013869 264 NRAGEAITAFTGVPTMYTRLIQ 285 (435)
Q Consensus 264 ~i~~~~~t~~~~~P~~~~~l~~ 285 (435)
+..-+++.++..+..+..+.+
T Consensus 146 -l~~~~~~~l~~~~~~~~~~~~ 166 (651)
T PLN02736 146 -VNHAEVAAIFCVPQTLNTLLS 166 (651)
T ss_pred -HhccCCCEEEECHHHHHHHHH
Confidence 566789999988877665543
No 146
>PRK12583 acyl-CoA synthetase; Provisional
Probab=70.99 E-value=49 Score=33.31 Aligned_cols=84 Identities=12% Similarity=0.091 Sum_probs=60.8
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHHHHHHHHHHHhCCeEEeCCCCC
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSY 102 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~ 102 (435)
..+|+..+...+..+... .+++++|++....+-. .-.+...++++..|+.++......
T Consensus 219 v~~s~~~l~~~~~~~~~~--------------------~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~ 278 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES--------------------LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAF 278 (558)
T ss_pred EEeeHHHHHHHHHHHHHH--------------------hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCC
Confidence 467888886655554433 3678899987776643 445566788888898887545556
Q ss_pred CHHHHHHHHhcCCccEEEechhhHHH
Q 013869 103 PESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
....+...+++.++.+++..+.....
T Consensus 279 ~~~~~~~~i~~~~~t~l~~~P~~~~~ 304 (558)
T PRK12583 279 DPLATLQAVEEERCTALYGVPTMFIA 304 (558)
T ss_pred CHHHHHHHHHHcCCeEEeccHHHHHH
Confidence 77888899999999999998876543
No 147
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=70.97 E-value=76 Score=31.12 Aligned_cols=97 Identities=18% Similarity=0.145 Sum_probs=72.0
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCC--CHHHH
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP--SFEFV 82 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~--~~~~~ 82 (435)
.||.++-+. ++.++|--++..++...+..+ |+...+++++-.|= ..-.+
T Consensus 232 ~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~--------------------g~~e~~~i~~~~Pl~H~~G~~ 291 (596)
T KOG1177|consen 232 SPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA--------------------GYNEKHRICIPNPLYHCFGCV 291 (596)
T ss_pred CCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh--------------------CcCcceEEEecCchHHHHHHH
Confidence 577777775 246899999999888877755 66664444433221 13346
Q ss_pred HHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHH
Q 013869 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (435)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (435)
+..+|++..|+..|.-.|.+.+...-..+++-++..++..+..+--+.
T Consensus 292 ~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dll 339 (596)
T KOG1177|consen 292 LGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLL 339 (596)
T ss_pred HHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHh
Confidence 678888999999998889999999999999999999999986654433
No 148
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=70.94 E-value=45 Score=30.51 Aligned_cols=59 Identities=12% Similarity=0.016 Sum_probs=44.3
Q ss_pred cCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech
Q 013869 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 64 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
-+++|+.| +=...+-.-+...+.|...|..++.+-|.....+...+|+..++.+++++.
T Consensus 58 ~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 58 LLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 37889843 344445667777777888898887776655555568899999999999997
No 149
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=69.52 E-value=32 Score=33.30 Aligned_cols=84 Identities=8% Similarity=-0.015 Sum_probs=61.9
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC-HHHHHHHHHHHHhCCeEEeCCCCCC
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS-FEFVAGVLGTWFSGCIAVPLALSYP 103 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~~~~ 103 (435)
..+|++.+...+..++.. .+++++|++....+-. ...+..+++++..|+..+..+..
T Consensus 129 v~~s~~~~~~~~~~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-- 186 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKEN--------------------LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-- 186 (436)
T ss_pred EEEehHHHHHHHHHHHhh--------------------cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH--
Confidence 368888887766665543 3678899998877754 33344567888999988877543
Q ss_pred HHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 104 ESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
+.+...+++.++.++...+.....+..
T Consensus 187 -~~~~~~l~~~~~t~~~~~P~~l~~l~~ 213 (436)
T TIGR01923 187 -NQLLEMIANERVTHISLVPTQLNRLLD 213 (436)
T ss_pred -HHHHHHHHHhCCeEEEeHHHHHHHHHh
Confidence 378889999999999999887665543
No 150
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=69.46 E-value=42 Score=34.00 Aligned_cols=69 Identities=13% Similarity=0.212 Sum_probs=53.2
Q ss_pred ccCCCCCeEEEEeCCCHH--HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 63 LAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
.++.++|++....+.... +...+++.+..|+..+.......++.+...+++.++.+++..+.....+..
T Consensus 241 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 311 (570)
T PRK04319 241 LDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMG 311 (570)
T ss_pred cCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 367788887766655432 234577888999988877667788899999999999999999988876644
No 151
>PRK09274 peptide synthase; Provisional
Probab=67.97 E-value=57 Score=32.82 Aligned_cols=99 Identities=17% Similarity=0.101 Sum_probs=61.6
Q ss_pred CCCCcEEEEecCCC-CCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 168 RGEDPALIVYTSGT-TGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 168 ~~~~~~~i~~TSGt-TG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
.++.++++....++ ....+...+|++++...+..++..+ ++.+++++..+++-+.-. ...+++++..|+..+..
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~--~~~~la~~~~G~~~v~l 96 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF--FALTFALFKAGAVPVLV 96 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH--HHHHHHHHHcCeEEEEc
Confidence 34556654432221 1223334689999888777766654 688999999888875444 34588999999999888
Q ss_pred CCcchhHHHHHHHhhcCCCCCccccccceecccc
Q 013869 244 PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (435)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P 277 (435)
++....+.+..+ +.+.++..++..+
T Consensus 97 ~~~~~~~~l~~~---------l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQC---------LAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHH---------HHhcCCCEEEecc
Confidence 764443333333 3345666655543
No 152
>PRK06164 acyl-CoA synthetase; Validated
Probab=67.71 E-value=62 Score=32.42 Aligned_cols=97 Identities=11% Similarity=0.030 Sum_probs=70.0
Q ss_pred CCeeEEEe--C-------CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC-HHHHHH
Q 013869 15 RDSVAIRA--D-------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS-FEFVAG 84 (435)
Q Consensus 15 p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~-~~~~~~ 84 (435)
++.++++. . +..+|...+...+..++..+ ++.+++++...+|-+ ...+..
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~--------------------~~~~~~~~l~~~p~~~~~g~~~ 239 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY--------------------GYDPGAVLLAALPFCGVFGFST 239 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc--------------------CCCCCCEEEEcCCchhHHHHHH
Confidence 45666664 1 23578888876666555444 567899998887764 334456
Q ss_pred HHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHH
Q 013869 85 VLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNV 132 (435)
Q Consensus 85 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (435)
+++.+..|+.++.. +......+...+++.++.+++..+.....+...
T Consensus 240 ~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~ 286 (540)
T PRK06164 240 LLGALAGGAPLVCE-PVFDAARTARALRRHRVTHTFGNDEMLRRILDT 286 (540)
T ss_pred HHHHHhcCceEEec-CCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHh
Confidence 78888888888766 456777889999999999999999887766544
No 153
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=66.95 E-value=75 Score=30.24 Aligned_cols=88 Identities=14% Similarity=0.071 Sum_probs=65.7
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC-HHHHHHHHHHHHhCCeEEeCCCCCC
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS-FEFVAGVLGTWFSGCIAVPLALSYP 103 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~~~~ 103 (435)
..+|+..+...+..+... .+++++|++....+.+ .-.+..+++.+..|+..+..+....
T Consensus 138 v~~s~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~ 197 (408)
T TIGR01733 138 VVVTHRSLVNLLAWLARR--------------------YGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEE 197 (408)
T ss_pred EEeccHHHHHHHHHHHHh--------------------cCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhc
Confidence 457888887666666552 3667889988877765 3345567788888988887765544
Q ss_pred --HHHHHHHHhcCCccEEEechhhHHHHHHH
Q 013869 104 --ESELLHVMHDSDISMVLSTEDYREVLQNV 132 (435)
Q Consensus 104 --~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (435)
...+..++++.++..++..+.....+...
T Consensus 198 ~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~ 228 (408)
T TIGR01733 198 RDAALLAALIAEHPVTVLNLTPSLLALLAAA 228 (408)
T ss_pred cCHHHHHHHHHHcCceEEEeCHHHHHHHHHh
Confidence 67889999999999999999988776554
No 154
>PLN03051 acyl-activating enzyme; Provisional
Probab=66.09 E-value=47 Score=33.00 Aligned_cols=68 Identities=4% Similarity=-0.044 Sum_probs=50.4
Q ss_pred cCCCCCeEEEEeCCCH-HHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 64 AGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 64 g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
++.++|++....+-+. .....+++++..|+..+..+.......+...+++.++.++...+.....+..
T Consensus 156 ~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~ 224 (499)
T PLN03051 156 DIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRH 224 (499)
T ss_pred CCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHh
Confidence 6778888876665432 1233567788899998877644556778999999999999999988776543
No 155
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=65.69 E-value=63 Score=32.70 Aligned_cols=98 Identities=13% Similarity=0.118 Sum_probs=68.0
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC-HHHHH
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS-FEFVA 83 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~-~~~~~ 83 (435)
.|+.+|++. ++..+|...+..++..... . .++.++|++....|-. ...+.
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~---~-----------------~~~~~~d~~l~~~pl~h~~g~~ 229 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIA---I-----------------VGYGEDDVYLHTAPLCHIGGLS 229 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHh---h-----------------cCCCCCCEEEEecCchhhccHH
Confidence 456677663 1246788777655444332 1 3778899888777743 33344
Q ss_pred HHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHH
Q 013869 84 GVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNV 132 (435)
Q Consensus 84 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (435)
..++.+..|+..+.. +......+...+++.++.++...+.....+...
T Consensus 230 ~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 277 (563)
T PLN02860 230 SALAMLMVGACHVLL-PKFDAKAALQAIKQHNVTSMITVPAMMADLISL 277 (563)
T ss_pred HHHHHHHcCceEEec-CCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHh
Confidence 567788889887765 456788889999999999999999887766543
No 156
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=65.26 E-value=56 Score=32.40 Aligned_cols=86 Identities=15% Similarity=0.143 Sum_probs=65.0
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH-HHHHHHHHHHHhCCeEEeCCCCCC
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYP 103 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~ 103 (435)
..+|...+...+......+ +++++|++...++-+. -.+...++++..|+..+..+ ...
T Consensus 179 v~~t~~~l~~~~~~~~~~~--------------------~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~ 237 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL--------------------ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLL 237 (515)
T ss_pred EEEecHHHHHHHHHHHHHh--------------------CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCC
Confidence 4578888877666555433 5677999988887653 24556788899999998664 457
Q ss_pred HHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 104 ESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
.+.+...+++.++.++...+.....+..
T Consensus 238 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 265 (515)
T TIGR03098 238 PRDVLKALEKHGITGLAAVPPLWAQLAQ 265 (515)
T ss_pred HHHHHHHHHHcCCceEecChHHHHHHHh
Confidence 8889999999999999999988766543
No 157
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=64.88 E-value=71 Score=31.35 Aligned_cols=67 Identities=4% Similarity=0.001 Sum_probs=51.9
Q ss_pred cCCCCCeEEEEeCCC-HHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 64 AGGCGARIGIVAKPS-FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 64 g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
++.++|++....|-. ...+..+++.+..|+..+..+ .....++...+++.++.++...+.....+..
T Consensus 178 ~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~ 245 (483)
T PRK03640 178 GLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISVVSTMLQRLLE 245 (483)
T ss_pred CCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 778899999888753 222344677778898888665 5678899999999999999999988876643
No 158
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=64.02 E-value=61 Score=29.41 Aligned_cols=82 Identities=16% Similarity=0.247 Sum_probs=53.9
Q ss_pred eEEEeC-CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEE
Q 013869 18 VAIRAD-QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAV 96 (435)
Q Consensus 18 ~al~~~-~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 96 (435)
++++.+ +..+-.+=+ -|+..+|..|+++ |..|..++.+......- .+...|..+.
T Consensus 2 i~ir~Da~~~iG~GHv-~Rcl~LA~~l~~~---------------------g~~v~f~~~~~~~~~~~--~i~~~g~~v~ 57 (279)
T TIGR03590 2 ILFRADASSEIGLGHV-MRCLTLARALHAQ---------------------GAEVAFACKPLPGDLID--LLLSAGFPVY 57 (279)
T ss_pred EEEEecCCccccccHH-HHHHHHHHHHHHC---------------------CCEEEEEeCCCCHHHHH--HHHHcCCeEE
Confidence 344433 344444433 5788999999765 66788887776555433 2357787777
Q ss_pred eCCCCC----CHHHHHHHHhcCCccEEEech
Q 013869 97 PLALSY----PESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 97 ~l~~~~----~~~~l~~~l~~~~~~~vi~~~ 123 (435)
.++-.. ..+++..++++.+++++++|.
T Consensus 58 ~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~ 88 (279)
T TIGR03590 58 ELPDESSRYDDALELINLLEEEKFDILIVDH 88 (279)
T ss_pred EecCCCchhhhHHHHHHHHHhcCCCEEEEcC
Confidence 774432 234678889999999999996
No 159
>PRK08308 acyl-CoA synthetase; Validated
Probab=63.31 E-value=92 Score=29.93 Aligned_cols=86 Identities=10% Similarity=0.130 Sum_probs=62.4
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHHHHHHHHHHHhCCeEEeCCCCC
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSY 102 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~ 102 (435)
..+|++.+...+..+...+ ++..+|++....+.. ..++..+++.+..|+..+.... .
T Consensus 119 v~~s~~~l~~~~~~~~~~~--------------------~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~-~ 177 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEAL--------------------NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN-K 177 (414)
T ss_pred EEEehHhHHHHHHHHHHhh--------------------CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC-C
Confidence 4689988877666555443 456688877776654 2345567888899998887654 4
Q ss_pred CHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 103 PESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
.+..+...+++.++.+++..+.....+..
T Consensus 178 ~~~~~~~~l~~~~~t~~~~~P~~~~~l~~ 206 (414)
T PRK08308 178 NPKFALNILRNTPQHILYAVPLMLHILGR 206 (414)
T ss_pred CHHHHHHHHHHhCCeEEEcCHHHHHHHHh
Confidence 67778888999999999999887766543
No 160
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=61.29 E-value=1e+02 Score=30.97 Aligned_cols=96 Identities=7% Similarity=0.018 Sum_probs=67.9
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH--HHH
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFV 82 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~--~~~ 82 (435)
.++.+|++. +...+|+..+...+.....++ ++.++|++....+-.- .++
T Consensus 188 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~--------------------~~~~~d~~l~~~p~~~~~g~~ 247 (546)
T PRK08314 188 GPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS--------------------NSTPESVVLAVLPLFHVTGMV 247 (546)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh--------------------CCCCCceEEEEcCchHHHHHH
Confidence 456777764 124688888877665544432 5677888877766432 234
Q ss_pred HHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHH
Q 013869 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (435)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (435)
..+++.+..|+.++..+ ......+...+++.++.++...+.....+.
T Consensus 248 ~~~~~~l~~G~~i~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll 294 (546)
T PRK08314 248 HSMNAPIYAGATVVLMP-RWDREAAARLIERYRVTHWTNIPTMVVDFL 294 (546)
T ss_pred HHHHHHHHcCCeEEecC-CCCHHHHHHHHHHhcCceecccHHHHHHHH
Confidence 56678889999888775 457778889999999999999887765443
No 161
>PRK06188 acyl-CoA synthetase; Validated
Probab=60.05 E-value=1.1e+02 Score=30.56 Aligned_cols=86 Identities=16% Similarity=0.077 Sum_probs=63.0
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCH
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPE 104 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~ 104 (435)
..+|+..+...+...... .++..++++....+-+-.+...+++.+..|+..+..+ ...+
T Consensus 186 v~~s~~~l~~~~~~~~~~--------------------~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~ 244 (524)
T PRK06188 186 VMGTHRSIATMAQIQLAE--------------------WEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDP 244 (524)
T ss_pred eeeehHHHHHHHHHHHhh--------------------cCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCH
Confidence 357777776655433322 3678899998888877555556677788898888765 4567
Q ss_pred HHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 105 SELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 105 ~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
..+...+++.++.+++..+.....+..
T Consensus 245 ~~~~~~i~~~~~t~~~~~P~~l~~l~~ 271 (524)
T PRK06188 245 AEVLRAIEEQRITATFLVPTMIYALLD 271 (524)
T ss_pred HHHHHHHHHhCCEEEEehHHHHHHHHh
Confidence 889999999999999998887665443
No 162
>PRK07638 acyl-CoA synthetase; Validated
Probab=58.74 E-value=1.1e+02 Score=30.02 Aligned_cols=87 Identities=13% Similarity=0.082 Sum_probs=62.3
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH-HHHHHHHHHHHhCCeEEeCCCCCC
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYP 103 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~ 103 (435)
..+|.+.+...+...+. . .+++++|++....+-.. .++...+..+..|+..+.. +...
T Consensus 161 v~~s~~~~~~~~~~~~~---~-----------------~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~ 219 (487)
T PRK07638 161 FLRAQQSWLHSFDCNVH---D-----------------FHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFI 219 (487)
T ss_pred EEEecHHHHHHHHHHHH---h-----------------cCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCC
Confidence 45777777655544332 2 36788999887766543 3345666777889888865 4567
Q ss_pred HHHHHHHHhcCCccEEEechhhHHHHHHH
Q 013869 104 ESELLHVMHDSDISMVLSTEDYREVLQNV 132 (435)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (435)
+.++...+++.++.++...+.....+...
T Consensus 220 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 248 (487)
T PRK07638 220 PNQVLDKLETENISVMYTVPTMLESLYKE 248 (487)
T ss_pred HHHHHHHHHHcCCeEEEeCcHHHHHHHhC
Confidence 88899999999999999999888766543
No 163
>PRK07788 acyl-CoA synthetase; Validated
Probab=58.71 E-value=60 Score=32.64 Aligned_cols=84 Identities=18% Similarity=0.048 Sum_probs=59.1
Q ss_pred EeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCc
Q 013869 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNR 265 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i 265 (435)
.+|++.+...+..++..+ ++.+++++...++-.--. +..+++++..|+.++..+...+.+.+..+ +
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~---------l 142 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGF--VLALYAAGKVGARIILLNTGFSGPQLAEV---------A 142 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHhcCCEEEEeCCCCCHHHHHHH---------H
Confidence 689999888777766544 678899988887665433 34688999999999988764444333333 4
Q ss_pred cccccceeccccHHHHHH
Q 013869 266 AGEAITAFTGVPTMYTRL 283 (435)
Q Consensus 266 ~~~~~t~~~~~P~~~~~l 283 (435)
++.+++.++..+.....+
T Consensus 143 ~~~~~~~ii~~~~~~~~~ 160 (549)
T PRK07788 143 AREGVKALVYDDEFTDLL 160 (549)
T ss_pred HhcCCcEEEECchhHHHH
Confidence 557788887777665544
No 164
>PRK08316 acyl-CoA synthetase; Validated
Probab=58.17 E-value=95 Score=30.80 Aligned_cols=85 Identities=16% Similarity=-0.013 Sum_probs=60.1
Q ss_pred EEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCc-chhHHHHHHHhhcCCCC
Q 013869 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNG 263 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~ 263 (435)
..+|+..+...+..++..+ ++.+++++..+.|-+... ...+++++..|+..+..+.. ....+...
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~--~~~~~a~~~~G~~~v~l~~~~~~~~i~~~--------- 103 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAY--ALLWLACARAGAVHVPVNFMLTGEELAYI--------- 103 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEEecccccCHHHHHHH---------
Confidence 5688998887777766543 678889988888776543 34588999999998888754 44444444
Q ss_pred CccccccceeccccHHHHHHH
Q 013869 264 NRAGEAITAFTGVPTMYTRLI 284 (435)
Q Consensus 264 ~i~~~~~t~~~~~P~~~~~l~ 284 (435)
+++.++..++..+.....+.
T Consensus 104 -l~~~~~~~ii~~~~~~~~~~ 123 (523)
T PRK08316 104 -LDHSGARAFLVDPALAPTAE 123 (523)
T ss_pred -HHhCCCCEEEEccchHHHHH
Confidence 55578888887777665554
No 165
>PRK05857 acyl-CoA synthetase; Validated
Probab=58.15 E-value=77 Score=31.84 Aligned_cols=79 Identities=18% Similarity=0.071 Sum_probs=54.4
Q ss_pred CCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
..++.++++.. .+ ...+|++.+...+..++..+ ++.+++++..+++-+.-. +..+++++..|+..+..
T Consensus 26 ~~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~--~~~~lA~~~~G~v~v~l 96 (540)
T PRK05857 26 QQPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET--YLSVLACAKLGAIAVMA 96 (540)
T ss_pred hCCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEec
Confidence 35666666532 22 14689999988888777654 678899998888776544 33588999999999988
Q ss_pred CCc-chhHHHHH
Q 013869 244 PKF-SVRGIWQR 254 (435)
Q Consensus 244 ~~~-~~~~~~~~ 254 (435)
+.. ....+...
T Consensus 97 ~~~~~~~~l~~~ 108 (540)
T PRK05857 97 DGNLPIAAIERF 108 (540)
T ss_pred CccCCHHHHHHH
Confidence 754 33444344
No 166
>PLN02565 cysteine synthase
Probab=57.24 E-value=1.7e+02 Score=27.32 Aligned_cols=60 Identities=10% Similarity=-0.074 Sum_probs=47.8
Q ss_pred CCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechh
Q 013869 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (435)
Q Consensus 65 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (435)
+.+|....+....+-.-+.+.++|..+|..++.+-|...+......++..++++++++++
T Consensus 63 ~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 63 IKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred CCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 367866556666677777788888899999988777667777788999999999999863
No 167
>PRK07470 acyl-CoA synthetase; Validated
Probab=57.07 E-value=1.2e+02 Score=30.26 Aligned_cols=67 Identities=13% Similarity=0.070 Sum_probs=47.6
Q ss_pred cCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeC-CCCCCHHHHHHHHhcCCccEEEechhhHHHHH
Q 013869 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (435)
Q Consensus 64 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (435)
++.++|++..+++-+..+-...+..+..|...+.+ ....+.+.+...+++.++.++...+.....+.
T Consensus 202 ~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 269 (528)
T PRK07470 202 GTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLV 269 (528)
T ss_pred CCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHH
Confidence 55778888888876644333334445556665544 34567888999999999999999998887653
No 168
>PRK13388 acyl-CoA synthetase; Provisional
Probab=57.07 E-value=1e+02 Score=31.00 Aligned_cols=83 Identities=8% Similarity=-0.132 Sum_probs=56.8
Q ss_pred EEeehHHHHHHHHHHHHhc---cC-CCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCc-chhHHHHHHHhhcCCC
Q 013869 188 VVHTHKSIDAQVQMLTEAW---EY-TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVN 262 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~-~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~~~~~~~~~ 262 (435)
..+|+..+...+..++..+ ++ .+++++...++-..-. +..+++++..|+.++.+++. ....+...
T Consensus 25 ~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~--v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~-------- 94 (540)
T PRK13388 25 RTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM--LFWLAAAALGGYVLVGLNTTRRGAALAAD-------- 94 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH--HHHHHHHHhCCCEEEEecccCChHHHHHH--------
Confidence 3789999888887776654 56 6788888888765443 34688999999999987764 33444444
Q ss_pred CCccccccceeccccHHHHH
Q 013869 263 GNRAGEAITAFTGVPTMYTR 282 (435)
Q Consensus 263 ~~i~~~~~t~~~~~P~~~~~ 282 (435)
+.+.+++.++........
T Consensus 95 --l~~~~~~~~i~~~~~~~~ 112 (540)
T PRK13388 95 --IRRADCQLLVTDAEHRPL 112 (540)
T ss_pred --HHhcCCCEEEEChhhhHH
Confidence 444677777766554433
No 169
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=56.62 E-value=1e+02 Score=28.65 Aligned_cols=60 Identities=5% Similarity=-0.093 Sum_probs=41.3
Q ss_pred CCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 68 g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
++.|... ..+-.-..+.++|...|..+..+-|...+......++..++++++++.++.+.
T Consensus 70 ~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~~~~~ 129 (324)
T cd01563 70 VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGNFDDA 129 (324)
T ss_pred CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCcHHHH
Confidence 3444433 44555666668888899888766554445556778999999999998765543
No 170
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=56.08 E-value=1.7e+02 Score=27.94 Aligned_cols=60 Identities=15% Similarity=-0.004 Sum_probs=48.0
Q ss_pred cCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech
Q 013869 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 64 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
-+++|....+....+-.-+...++|...|..+..+-|.....+....++..+++++++++
T Consensus 106 ~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 106 LITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred CcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 357786555557777888888889999999988887766666678899999999999974
No 171
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=56.01 E-value=34 Score=29.92 Aligned_cols=52 Identities=17% Similarity=0.119 Sum_probs=41.7
Q ss_pred ccCCCCCeEEEEeCCCH--HHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCc
Q 013869 63 LAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDI 116 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 116 (435)
.++.++|++. .+|-.- -+...+++++..|+..+.+ +.+.++++-..+++.++
T Consensus 173 ~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 173 AGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred cCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 4889999999 888663 3345689999999999988 57888888888887765
No 172
>PRK06839 acyl-CoA synthetase; Validated
Probab=54.51 E-value=1.3e+02 Score=29.54 Aligned_cols=96 Identities=9% Similarity=-0.029 Sum_probs=66.5
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc----cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~----~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
.++.++++. ....+|+..+...+..+...+ ++.+++++...++-+... ...+++++..|...+..
T Consensus 15 ~p~~~a~~~---------~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~~ 83 (496)
T PRK06839 15 HPDRIAIIT---------EEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEY--IVLLFAIAKVECIAVPL 83 (496)
T ss_pred CCCCeEEEE---------CCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEEec
Confidence 456666653 135789999988888877654 578889988888776443 34688999999999988
Q ss_pred CC-cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHH
Q 013869 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLI 284 (435)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 284 (435)
+. .+..++... +++.+++.++..+.....+.
T Consensus 84 ~~~~~~~~~~~~----------l~~~~~~~i~~~~~~~~~~~ 115 (496)
T PRK06839 84 NIRLTENELIFQ----------LKDSGTTVLFVEKTFQNMAL 115 (496)
T ss_pred CcccCHHHHHHH----------HHhcCceEEEEcHHHHHHHH
Confidence 75 444444444 44568888887776655443
No 173
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=54.23 E-value=1.5e+02 Score=31.00 Aligned_cols=86 Identities=12% Similarity=-0.007 Sum_probs=61.7
Q ss_pred EEeehHHHHHHHHHHHH---hccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCc-chhHHHHHHHhhcCCCC
Q 013869 188 VVHTHKSIDAQVQMLTE---AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNG 263 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~ 263 (435)
..+|++.+...+..++. ..++.+++++...++-+.-. +...++++..|+.++..... ..+.+...
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~i--------- 173 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEW--LIALQGCFRQNITVVTIYASLGEEALCHS--------- 173 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCCCCHHHHHHH---------
Confidence 45799988887777665 44788999988888765443 33588899999999877654 44444444
Q ss_pred CccccccceeccccHHHHHHHh
Q 013869 264 NRAGEAITAFTGVPTMYTRLIQ 285 (435)
Q Consensus 264 ~i~~~~~t~~~~~P~~~~~l~~ 285 (435)
+...+++.++.....+..+.+
T Consensus 174 -l~~s~~~~li~~~~~~~~l~~ 194 (696)
T PLN02387 174 -LNETEVTTVICDSKQLKKLID 194 (696)
T ss_pred -HHccCCCEEEECHHHHHHHHH
Confidence 555788888888777666644
No 174
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=54.22 E-value=1e+02 Score=31.11 Aligned_cols=88 Identities=15% Similarity=0.077 Sum_probs=68.3
Q ss_pred eEEeehHHHHHHHHHHHHhcc-----CCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC-cchhHHHHHHHhhcC
Q 013869 187 GVVHTHKSIDAQVQMLTEAWE-----YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYP 260 (435)
Q Consensus 187 ~v~~t~~~l~~~~~~~~~~~~-----~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~ 260 (435)
+..+|++.+...+.+++..+. ...+|++....|-...+.. ..+++...|+.+.-..+ ++...+...
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~--~~la~~~~Ga~~~~~Np~~~~~ei~~~------ 114 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVE--LALAVPMAGAVLNPLNPRLTASEIAKQ------ 114 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCccccccCcccCHHHHHHH------
Confidence 679999999888888877653 6779999999998766654 47889999999988765 555666555
Q ss_pred CCCCccccccceeccccHHHHHHHhh
Q 013869 261 VNGNRAGEAITAFTGVPTMYTRLIQG 286 (435)
Q Consensus 261 ~~~~i~~~~~t~~~~~P~~~~~l~~~ 286 (435)
++.-+++.++.....+..+.+.
T Consensus 115 ----~~~s~~kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 115 ----LKDSKPKLIFVDEDFYDKISEA 136 (537)
T ss_pred ----HHhcCCeEEEEcCchHHHHHHH
Confidence 4457889999888888777554
No 175
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=54.09 E-value=1e+02 Score=31.00 Aligned_cols=78 Identities=15% Similarity=0.021 Sum_probs=53.8
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.+|++..-. +.++...+|+..+...+..++..+ ++.+++++...+|-+.-. +..+++++..|+..+..+
T Consensus 37 ~p~~~A~~~~~~---~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~--~~~~la~~~~G~~~vpl~ 111 (547)
T PRK13295 37 CPDKTAVTAVRL---GTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF--TVLYLACSRIGAVLNPLM 111 (547)
T ss_pred CCCceEEEecCC---CccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH--HHHHHHHHhcCcEEeccc
Confidence 456666654322 223345789999888777766644 788999999888876544 335889999999998777
Q ss_pred CcchhH
Q 013869 245 KFSVRG 250 (435)
Q Consensus 245 ~~~~~~ 250 (435)
+....+
T Consensus 112 ~~~~~~ 117 (547)
T PRK13295 112 PIFRER 117 (547)
T ss_pred cccCHH
Confidence 644433
No 176
>PLN03013 cysteine synthase
Probab=53.34 E-value=1.2e+02 Score=29.56 Aligned_cols=61 Identities=8% Similarity=-0.083 Sum_probs=48.1
Q ss_pred cCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechh
Q 013869 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (435)
Q Consensus 64 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (435)
.+++|....+....+-.-+.+.++|...|..++.+-|.....+....++..+++++++++.
T Consensus 170 ~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 170 FISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred CcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 3577866666777777888888888899988877766556667788899999999999864
No 177
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=53.15 E-value=1.2e+02 Score=24.36 Aligned_cols=76 Identities=13% Similarity=0.069 Sum_probs=50.9
Q ss_pred cCCCCCeEEEEe-CCC-HHHHHHHHHHHHhCCeEEeCCCCC-------CHHHHHHHHhcCCccEEEechhhHHHHHHHHh
Q 013869 64 AGGCGARIGIVA-KPS-FEFVAGVLGTWFSGCIAVPLALSY-------PESELLHVMHDSDISMVLSTEDYREVLQNVAS 134 (435)
Q Consensus 64 g~~~g~~V~i~~-~~~-~~~~~~~lA~~~~G~~~v~l~~~~-------~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 134 (435)
..-+|..|++++ .+| ..-+....|+.++|+.++.+++.. +..+...+|.+. ++++++-......+.....
T Consensus 35 ~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~-~D~iv~R~~~~~~~~~~a~ 113 (142)
T PF02729_consen 35 QLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY-VDAIVIRHPSHGALEELAE 113 (142)
T ss_dssp TTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-CSEEEEEESSHHHHHHHHH
T ss_pred ccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-hheEEEEeccchHHHHHHH
Confidence 345567776664 455 555666788999999999987533 455677888898 8888877666666666655
Q ss_pred ccCCcc
Q 013869 135 KSGAKF 140 (435)
Q Consensus 135 ~~~~~~ 140 (435)
.....+
T Consensus 114 ~~~vPV 119 (142)
T PF02729_consen 114 HSSVPV 119 (142)
T ss_dssp HCSSEE
T ss_pred hccCCe
Confidence 554333
No 178
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=53.15 E-value=1.3e+02 Score=30.80 Aligned_cols=85 Identities=7% Similarity=-0.097 Sum_probs=59.3
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH--HHHHHHHHHHhCCeEEeCCCCC
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSY 102 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~ 102 (435)
..+|...+...+..+... .++.++|++...+|-... ++..+++.+..|+..+. .+..
T Consensus 217 V~~sh~~l~~~~~~~~~~--------------------~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~~~ 275 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGL--------------------LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RRKF 275 (600)
T ss_pred EEEeHHHHHHHHHHHHHh--------------------cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cCCC
Confidence 468888887776665543 267889999888776532 33345556666666654 5566
Q ss_pred CHHHHHHHHhcCCccEEEechhhHHHHH
Q 013869 103 PESELLHVMHDSDISMVLSTEDYREVLQ 130 (435)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (435)
....+...+++.++.++...+.....+.
T Consensus 276 ~~~~~~~~i~~~~~t~~~~~p~l~~~l~ 303 (600)
T PRK08279 276 SASRFWDDVRRYRATAFQYIGELCRYLL 303 (600)
T ss_pred CHHHHHHHHHHhcceEEeehHHHHHHHH
Confidence 7788888899999999988777665544
No 179
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=53.14 E-value=1.3e+02 Score=30.91 Aligned_cols=96 Identities=18% Similarity=0.147 Sum_probs=64.6
Q ss_pred CCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
..++.+|++.... . ......+|++.+...+..++..+ ++.++|++...+|-.--. +..+++++..|+..+..
T Consensus 79 ~~p~~~Al~~~~~--~-~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~l 153 (637)
T PRK00174 79 TRGDKVAIIWEGD--D-PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA--AVAMLACARIGAVHSVV 153 (637)
T ss_pred cCCCCeEEEEECC--C-CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEec
Confidence 3567777764321 1 11356789999988887776654 788999999888875544 33588999999999887
Q ss_pred CC-cchhHHHHHHHhhcCCCCCccccccceecccc
Q 013869 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (435)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P 277 (435)
++ +....+... +...+++.++...
T Consensus 154 ~~~~~~~~l~~~----------l~~~~~~~li~~~ 178 (637)
T PRK00174 154 FGGFSAEALADR----------IIDAGAKLVITAD 178 (637)
T ss_pred CCCCCHHHHHHH----------HHhcCCcEEEEcC
Confidence 65 455555555 4445666666544
No 180
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=53.04 E-value=1.7e+02 Score=29.51 Aligned_cols=100 Identities=15% Similarity=0.180 Sum_probs=73.9
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHHH
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~~ 82 (435)
.|+.+|++. ++..+|++.+...+..+...+.. .+.+.|++...+|-. .-+.
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~------------------~~~~~d~~l~~lPl~H~~Gl~ 230 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGG------------------GLTPDDVVLSWLPLFHIFGLI 230 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcc------------------cCCCCceEEEecChHHHHHHH
Confidence 367778774 23568999999888888777753 267788877777755 4455
Q ss_pred HHHHHHHHhCCeEEeCCC-CCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 83 AGVLGTWFSGCIAVPLAL-SYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
..+++.+..|...+...+ .+.++.+...+.+.++..+...+.....+..
T Consensus 231 ~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~ 280 (534)
T COG0318 231 VGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLD 280 (534)
T ss_pred HHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHh
Confidence 567777888888887765 6788888888888888888888877766443
No 181
>PLN02246 4-coumarate--CoA ligase
Probab=52.63 E-value=83 Score=31.54 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=62.7
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.++++... + +..+|+..+...+..+... .++.+++++..+.+-+.-. +..+++++..|++.+..+
T Consensus 36 ~~~~~a~~~~~---~----~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~ 106 (537)
T PLN02246 36 FSDRPCLIDGA---T----GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEF--VLAFLGASRRGAVTTTAN 106 (537)
T ss_pred CCCCeEEEecC---C----CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH--HHHHHHHHHcCEEEecCC
Confidence 45667655321 1 2368999988777666654 4788999998887776433 345888899999999887
Q ss_pred CcchhHHHHHHHhhcCCCCCccccccceeccccHHHHH
Q 013869 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (435)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 282 (435)
+..+...+..+ ++..++..++........
T Consensus 107 ~~~~~~~l~~~---------l~~~~~~~li~~~~~~~~ 135 (537)
T PLN02246 107 PFYTPAEIAKQ---------AKASGAKLIITQSCYVDK 135 (537)
T ss_pred CCCCHHHHHHH---------HHhcCCcEEEEccchHHH
Confidence 65444433333 445677766665554443
No 182
>PLN03052 acetate--CoA ligase; Provisional
Probab=52.25 E-value=1.7e+02 Score=30.98 Aligned_cols=86 Identities=20% Similarity=0.220 Sum_probs=59.0
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.+|++.-..+..+. ....+|++.+...+..++.. .++.++|++..++|-.--. +..+++++..|+..+.++
T Consensus 188 ~pd~~Ai~~~~e~~~~~-~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~--via~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDL-PVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA--VIIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCC-ceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCCEEEeeC
Confidence 45677765433322122 23568999998888777664 4789999999999975443 346889999999888775
Q ss_pred -CcchhHHHHHHH
Q 013869 245 -KFSVRGIWQRWR 256 (435)
Q Consensus 245 -~~~~~~~~~~~~ 256 (435)
.+..+.+...+.
T Consensus 265 p~~~~~~l~~rl~ 277 (728)
T PLN03052 265 DSFAPSEIATRLK 277 (728)
T ss_pred CCCCHHHHHHHHH
Confidence 466666666643
No 183
>PLN02614 long-chain acyl-CoA synthetase
Probab=52.05 E-value=2.3e+02 Score=29.50 Aligned_cols=85 Identities=9% Similarity=-0.134 Sum_probs=59.5
Q ss_pred EEeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCC
Q 013869 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGN 264 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (435)
..+|++.+...+..++.. .++.++|++...++-+.-. +...++++..|+.++..+.....+-+..+
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~i--------- 146 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW--IISMEACNAHGLYCVPLYDTLGAGAVEFI--------- 146 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEEecCCCCHHHHHHH---------
Confidence 357899888877776654 4788999998888876543 34588999999999888765444444443
Q ss_pred ccccccceeccccHHHHHH
Q 013869 265 RAGEAITAFTGVPTMYTRL 283 (435)
Q Consensus 265 i~~~~~t~~~~~P~~~~~l 283 (435)
+...+++.++.....+..+
T Consensus 147 l~~~~~~~vi~~~~~~~~~ 165 (666)
T PLN02614 147 ISHSEVSIVFVEEKKISEL 165 (666)
T ss_pred HhccCCCEEEECHHHHHHH
Confidence 5556778777766554444
No 184
>PLN03102 acyl-activating enzyme; Provisional
Probab=51.74 E-value=98 Score=31.48 Aligned_cols=82 Identities=11% Similarity=-0.064 Sum_probs=58.4
Q ss_pred EeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCc
Q 013869 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNR 265 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i 265 (435)
.+|++.+...+..++..+ ++..++++...+|-.--. +..+++++..|+.++..++....+.+..+ +
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~--~~~~la~~~~G~~~vpl~~~~~~~~l~~~---------l 107 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAM--YEMHFAVPMAGAVLNPINTRLDATSIAAI---------L 107 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH--HHHHHHHHhcCcEEeeccccCCHHHHHHH---------H
Confidence 689999888877776654 788999999888864433 34588999999999888764444433433 5
Q ss_pred cccccceeccccHHHH
Q 013869 266 AGEAITAFTGVPTMYT 281 (435)
Q Consensus 266 ~~~~~t~~~~~P~~~~ 281 (435)
+..+++.++..+....
T Consensus 108 ~~~~~~~ii~~~~~~~ 123 (579)
T PLN03102 108 RHAKPKILFVDRSFEP 123 (579)
T ss_pred hccCCeEEEEChhhHH
Confidence 5578888877665443
No 185
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=51.15 E-value=1e+02 Score=31.03 Aligned_cols=94 Identities=14% Similarity=0.102 Sum_probs=60.5
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.++++.... | ..+|++.+...+..+...+ ++.+++++...+|-..-.- ..+++++..|+..+..+
T Consensus 41 ~p~~~a~~~~~~---~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~--~~~lA~~~~G~~~vpl~ 111 (546)
T PLN02330 41 YADKVAFVEAVT---G----KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYG--IVALGIMAAGGVFSGAN 111 (546)
T ss_pred CCCccEEEecCC---C----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH--HHHHHHHHhCcEeccCC
Confidence 456666653221 2 3689999888777776544 6788999988887765443 35889999999988776
Q ss_pred Ccch-hHHHHHHHhhcCCCCCccccccceeccccHHH
Q 013869 245 KFSV-RGIWQRWRESYPVNGNRAGEAITAFTGVPTMY 280 (435)
Q Consensus 245 ~~~~-~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~ 280 (435)
...+ ...... ++..++..++..+..+
T Consensus 112 ~~~~~~~l~~~----------l~~~~~~~~i~~~~~~ 138 (546)
T PLN02330 112 PTALESEIKKQ----------AEAAGAKLIVTNDTNY 138 (546)
T ss_pred ccCCHHHHHHH----------HHhcCCeEEEEccchh
Confidence 5444 333333 3445555555544433
No 186
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=50.94 E-value=1.8e+02 Score=29.93 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=71.4
Q ss_pred ccCCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHH
Q 013869 12 SMARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV 82 (435)
Q Consensus 12 ~~~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~ 82 (435)
...||.+|.+. ++.-+||.-+..++..+...+. -++++|++.-++|-+--+=
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~-------------------~~~~~d~~LsfLPlaHi~E 247 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP-------------------PIGPGDRVLSFLPLAHIFE 247 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC-------------------CCCCCcEEEEeCcHHHHHH
Confidence 45688888874 3467999999999888877663 1578999999999762222
Q ss_pred HHH-HHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHH
Q 013869 83 AGV-LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNV 132 (435)
Q Consensus 83 ~~~-lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (435)
-++ .++...+.+.+... .+...+..-|.+.+|.+++.-+..++.+...
T Consensus 248 r~~~~~~~~~~g~~~~~~--~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~ 296 (613)
T COG1022 248 RAFEGGLALYGGVTVLFK--EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKG 296 (613)
T ss_pred HHHHHHHHhhcceEEEec--CCHHHHHHHHHHhCCeEEeechHHHHHHHHH
Confidence 222 44545555544433 3567789999999999999999888776654
No 187
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=50.80 E-value=1.6e+02 Score=29.28 Aligned_cols=99 Identities=11% Similarity=-0.018 Sum_probs=64.8
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.++++.-.. .+ ..-.+|+..+...+..+... .++.+++++..+.+-+.-.- ..+++++..|+.++..+
T Consensus 20 ~p~~~a~~~~~~--~~--~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~--~~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 20 YGHKTALIFESS--GG--VVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI--FCWFGLAKIGAIMVPIN 93 (517)
T ss_pred CCCceEEEcccC--CC--ccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEEcC
Confidence 456666554221 11 12357888887777776653 47889999998888766543 35888999999988876
Q ss_pred Cc-chhHHHHHHHhhcCCCCCccccccceeccccHHHHH
Q 013869 245 KF-SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (435)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 282 (435)
+. ........ +++.+++.++..+.....
T Consensus 94 ~~~~~~~l~~~----------l~~~~~~~l~~~~~~~~~ 122 (517)
T PRK08008 94 ARLLREESAWI----------LQNSQASLLVTSAQFYPM 122 (517)
T ss_pred cccCHHHHHHH----------HHhcCceEEEEecchhHH
Confidence 54 44444444 555778877777665433
No 188
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=50.70 E-value=1.8e+02 Score=25.65 Aligned_cols=60 Identities=15% Similarity=0.022 Sum_probs=44.4
Q ss_pred CCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHH
Q 013869 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (435)
Q Consensus 67 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (435)
++..| +....+-....+.++|...|..++.+-|..........++..+++++.++.++.+
T Consensus 49 ~~~~v-v~~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 108 (244)
T cd00640 49 PKGVI-IESTGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDFDD 108 (244)
T ss_pred CCCEE-EEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHH
Confidence 34444 4444467777778888889988887766556666788899999999999987544
No 189
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=50.69 E-value=1e+02 Score=35.34 Aligned_cols=86 Identities=15% Similarity=0.030 Sum_probs=58.4
Q ss_pred CCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
..++.+|++...+...+......+|++.+...+..++..+ +..+++++..+++-+.-. +..+++++..|+.++.+
T Consensus 248 ~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~--i~~~lA~l~~G~~~vpl 325 (1389)
T TIGR03443 248 KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL--VVAVMGVLKAGATFSVI 325 (1389)
T ss_pred hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH--HHHHHHHHhhCcEEecc
Confidence 4567777764322111111234789999988887777654 688999999888876544 34689999999999988
Q ss_pred CCcchhHHHHH
Q 013869 244 PKFSVRGIWQR 254 (435)
Q Consensus 244 ~~~~~~~~~~~ 254 (435)
++..+..-...
T Consensus 326 dp~~p~~~~~~ 336 (1389)
T TIGR03443 326 DPAYPPARQTI 336 (1389)
T ss_pred CCCCcHHHHHH
Confidence 87555444443
No 190
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=50.66 E-value=1.3e+02 Score=24.00 Aligned_cols=45 Identities=11% Similarity=0.073 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech
Q 013869 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
.-..+....+-..|.-++.+-...+.+++.....+.++++|..+.
T Consensus 18 lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 18 VGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 334455556667899999999999999999999999999999985
No 191
>PRK06381 threonine synthase; Validated
Probab=50.47 E-value=2.1e+02 Score=26.49 Aligned_cols=58 Identities=12% Similarity=-0.055 Sum_probs=44.1
Q ss_pred EEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 71 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
-.+....+-.-+.+.++|...|..+..+-|...+......++..++++++++.++.+.
T Consensus 65 ~lv~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~~~~ 122 (319)
T PRK06381 65 GITVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKYEEA 122 (319)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCHHHH
Confidence 3344666788888888999999988776665555556678999999999998765443
No 192
>PRK07798 acyl-CoA synthetase; Validated
Probab=50.42 E-value=1.7e+02 Score=28.96 Aligned_cols=85 Identities=12% Similarity=-0.034 Sum_probs=55.4
Q ss_pred EEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCC
Q 013869 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGN 264 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (435)
-.+|+..+...+..++..+ ++..++++..+++-.-.. ...+++++..|+..+..+..-+.+.+..+
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~--~~~~~a~~~~G~~~v~l~~~~~~~~l~~~--------- 95 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEY--VEAMLGAFKARAVPVNVNYRYVEDELRYL--------- 95 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHhcCeEEEecCcCCCHHHHHHH---------
Confidence 3688888877777766544 677889888877664433 34588889999999888764343333333
Q ss_pred ccccccceeccccHHHHHH
Q 013869 265 RAGEAITAFTGVPTMYTRL 283 (435)
Q Consensus 265 i~~~~~t~~~~~P~~~~~l 283 (435)
+++.++..++..+.....+
T Consensus 96 l~~~~~~~~~~~~~~~~~~ 114 (533)
T PRK07798 96 LDDSDAVALVYEREFAPRV 114 (533)
T ss_pred HhhcCCCEEEEchhhHHHH
Confidence 4445666666655544333
No 193
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=50.18 E-value=1.5e+02 Score=33.63 Aligned_cols=98 Identities=6% Similarity=-0.018 Sum_probs=68.7
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHH-H
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV-A 83 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~-~ 83 (435)
.|+.+|++. ++..+|.+.+...+..... . .++.++|++....+-+.+.- .
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~----------------~~~~~~d~~l~~~~~~fd~~~~ 655 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQN----H----------------YPLTADDVVLQKTPCSFDVSVW 655 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHH----h----------------cCCCCCCEEEEeCCcchhhhHH
Confidence 466777763 2346888877655443332 2 47888999998888775443 3
Q ss_pred HHHHHHHhCCeEEeCCC--CCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 84 GVLGTWFSGCIAVPLAL--SYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 84 ~~lA~~~~G~~~v~l~~--~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
-+++.+..|+..+..++ ...+..+...+++.++.++...+.....+..
T Consensus 656 ~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~ 705 (1296)
T PRK10252 656 EFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVA 705 (1296)
T ss_pred HHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 46777888999887664 3467788899999999999888877665443
No 194
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=50.15 E-value=2.1e+02 Score=26.27 Aligned_cols=59 Identities=14% Similarity=0.024 Sum_probs=45.3
Q ss_pred CCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechh
Q 013869 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (435)
Q Consensus 65 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (435)
+.+|+.| +....+-.-..+.++|...|..+..+-|...+......++..++++++++.+
T Consensus 55 ~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 55 LKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred CCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3667766 4566677777788888899998877766655556677899999999999865
No 195
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=49.77 E-value=88 Score=28.54 Aligned_cols=58 Identities=10% Similarity=-0.009 Sum_probs=44.6
Q ss_pred CCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhh
Q 013869 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY 125 (435)
Q Consensus 67 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 125 (435)
+|+.|+ ....+-....+.++|.++|..++.+-|..........++..++++++++...
T Consensus 52 ~~~~vv-~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 52 PGTTII-EPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred CCCEEE-EeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 455554 4666777888888999999988777665555566788999999999998765
No 196
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=49.38 E-value=1.4e+02 Score=30.93 Aligned_cols=82 Identities=26% Similarity=0.315 Sum_probs=56.0
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.+|++.... .| ....+|++.+...+..++..+ ++.++|++..++|-.--. +..+++++..|+..+.++
T Consensus 97 ~~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--v~~~lA~~~~Gav~v~l~ 170 (655)
T PRK03584 97 RDDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPET--VVAMLATASLGAIWSSCS 170 (655)
T ss_pred CCCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCcEEEeeC
Confidence 456677654322 22 235789999888777766544 788999999999875443 346889999999988775
Q ss_pred C-cchhHHHHHH
Q 013869 245 K-FSVRGIWQRW 255 (435)
Q Consensus 245 ~-~~~~~~~~~~ 255 (435)
+ +....+...+
T Consensus 171 ~~~~~~~l~~~l 182 (655)
T PRK03584 171 PDFGVQGVLDRF 182 (655)
T ss_pred CCCCHHHHHHHH
Confidence 4 5555555553
No 197
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.27 E-value=1.6e+02 Score=29.76 Aligned_cols=68 Identities=13% Similarity=-0.010 Sum_probs=51.3
Q ss_pred ccCCCCCeEEEEeCCCHH-HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHH
Q 013869 63 LAGGCGARIGIVAKPSFE-FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (435)
.++.+++++...+|-.-. .+...++++..|...+...+...+..+...+++.++.+++..+.....+.
T Consensus 219 ~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 287 (576)
T PRK05620 219 LAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLM 287 (576)
T ss_pred cCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHH
Confidence 377889999888775532 23445777888888876666678888999999999999999887765543
No 198
>PRK07514 malonyl-CoA synthase; Validated
Probab=49.20 E-value=1.1e+02 Score=30.10 Aligned_cols=85 Identities=16% Similarity=0.089 Sum_probs=58.0
Q ss_pred eEEeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCc-chhHHHHHHHhhcCCC
Q 013869 187 GVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVN 262 (435)
Q Consensus 187 ~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~~~~~~~~~ 262 (435)
+..+|+..+...+..+... .++.+++++....+-..-. ...+++++..|+..+..++. ....+...
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~--~v~~la~~~~G~~~v~l~~~~~~~~~~~~-------- 95 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEA--LALYLATLRAGAVFLPLNTAYTLAELDYF-------- 95 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEEECCCCCCHHHHHHH--------
Confidence 3478888887776666654 4788999998888876433 34688999999999888754 44444444
Q ss_pred CCccccccceeccccHHHHHH
Q 013869 263 GNRAGEAITAFTGVPTMYTRL 283 (435)
Q Consensus 263 ~~i~~~~~t~~~~~P~~~~~l 283 (435)
++..+++.++..+.....+
T Consensus 96 --l~~~~~~~ii~~~~~~~~~ 114 (504)
T PRK07514 96 --IGDAEPALVVCDPANFAWL 114 (504)
T ss_pred --HHhCCCcEEEEccchhHHH
Confidence 4456777777666655443
No 199
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=49.12 E-value=57 Score=29.63 Aligned_cols=65 Identities=14% Similarity=-0.042 Sum_probs=51.4
Q ss_pred cCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeC-CCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 64 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
.+++||.|+=-..||.---+++-=|-..|+-.+-+ .-.-..+++...|+..+++.||++++....
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~ 222 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR 222 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch
Confidence 66889999999999966666666666778776655 334457789999999999999999988754
No 200
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=49.09 E-value=1.8e+02 Score=30.10 Aligned_cols=94 Identities=17% Similarity=0.108 Sum_probs=63.5
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.+|++.-..+ .+ ....+|++.+...+..++..+ ++.++|++...+|..--. +..+++++..|+..+...
T Consensus 74 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~--~~~~lA~~~~Gav~vpl~ 148 (647)
T PTZ00237 74 KRDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP--LIAMLSCARIGATHCVLF 148 (647)
T ss_pred CCCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeC
Confidence 3466666543221 11 235789999988887777644 789999999999986544 335888999998887775
Q ss_pred -CcchhHHHHHHHhhcCCCCCccccccceeccc
Q 013869 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (435)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 276 (435)
.+....+...+ +..+++.++..
T Consensus 149 ~~~~~~~l~~~l----------~~~~~~~li~~ 171 (647)
T PTZ00237 149 DGYSVKSLIDRI----------ETITPKLIITT 171 (647)
T ss_pred CCCCHHHHHHHH----------HhcCCCEEEEc
Confidence 56666666664 34566666654
No 201
>PRK13383 acyl-CoA synthetase; Provisional
Probab=48.94 E-value=1.2e+02 Score=30.31 Aligned_cols=85 Identities=9% Similarity=-0.027 Sum_probs=59.5
Q ss_pred EeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCc
Q 013869 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNR 265 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i 265 (435)
.+|...+...+..+...+ ++.+++++...++-.-.. +..+++++..|+..+..++.-+.+.+..+ +
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~v~vpl~~~~~~~~l~~~---------l 128 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGF--VTAVFAVGLLGADVVPISTEFRSDALAAA---------L 128 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEEEcCccCCHHHHHHH---------H
Confidence 578888877777776654 678899988888754433 34688899999999988765444333333 5
Q ss_pred cccccceeccccHHHHHHH
Q 013869 266 AGEAITAFTGVPTMYTRLI 284 (435)
Q Consensus 266 ~~~~~t~~~~~P~~~~~l~ 284 (435)
.+.+++.++..+.....+.
T Consensus 129 ~~~~~~~ii~~~~~~~~~~ 147 (516)
T PRK13383 129 RAHHISTVVADNEFAERIA 147 (516)
T ss_pred hcCCCCEEEEchhHHHHHH
Confidence 5678888888776655543
No 202
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=48.73 E-value=1.7e+02 Score=30.79 Aligned_cols=95 Identities=11% Similarity=0.091 Sum_probs=64.4
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHHH
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~~ 82 (435)
.|+.+|++. ++..+|++.+...+..+... .++.++|++...+|-. ..+.
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~--------------------~~~~~~d~~l~~~Pl~h~~g~~ 422 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTI--------------------ADFTPNDRFMSALPLFHSFGLT 422 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh--------------------hCCCccCeEEEcCcchhhhhhH
Confidence 456667663 23468888887666554432 3678899988877753 3344
Q ss_pred HHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
..+++.+..|+.++..+.......+...+++.++.++...+.....
T Consensus 423 ~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ 468 (718)
T PRK08043 423 VGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGN 468 (718)
T ss_pred HHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHH
Confidence 5577888899988866544445566777888999988887765543
No 203
>PRK11761 cysM cysteine synthase B; Provisional
Probab=48.73 E-value=2.2e+02 Score=26.14 Aligned_cols=58 Identities=12% Similarity=-0.043 Sum_probs=45.0
Q ss_pred CCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech
Q 013869 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 65 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
+.+|+.|.. ...+-.-..+.++|...|..+..+-|...+......++..++++++++.
T Consensus 60 ~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 60 IKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred CCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 466766544 5566777778888889999887776665556678889999999999986
No 204
>PLN02654 acetate-CoA ligase
Probab=48.43 E-value=1.9e+02 Score=30.16 Aligned_cols=95 Identities=19% Similarity=0.098 Sum_probs=63.5
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.+|++.... ..+ ....+|++.+...+..++.. .++.++|++..++|..--. +..+++++..|+..+..+
T Consensus 102 ~~~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~--v~a~lA~~~~Gav~vpv~ 176 (666)
T PLN02654 102 NGDKIAIYWEGN-EPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMEL--PIAMLACARIGAVHSVVF 176 (666)
T ss_pred CCCCEEEEEEcC-CCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecC
Confidence 456676653221 111 23578999998888777664 4788999999999886543 346889999999888775
Q ss_pred -CcchhHHHHHHHhhcCCCCCccccccceecccc
Q 013869 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (435)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P 277 (435)
.+..+.+...+ ...++..++...
T Consensus 177 ~~~~~~~l~~~l----------~~~~~~~li~~~ 200 (666)
T PLN02654 177 AGFSAESLAQRI----------VDCKPKVVITCN 200 (666)
T ss_pred CCCCHHHHHHHH----------HhcCceEEEEcC
Confidence 46666665553 335666665544
No 205
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=48.12 E-value=1.9e+02 Score=29.69 Aligned_cols=96 Identities=17% Similarity=0.128 Sum_probs=64.2
Q ss_pred CCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
..++.+|++.... .+| ....+|++.+...+..++..+ ++.++|++..++|-+--. +..+++++..|+..+..
T Consensus 69 ~~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 69 ARPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA--AIAMLACARIGAIHSVV 143 (625)
T ss_pred cCCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEecc
Confidence 3567777664322 122 245789999888777776644 788999999998875443 34588999999998877
Q ss_pred C-CcchhHHHHHHHhhcCCCCCccccccceecccc
Q 013869 244 P-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (435)
Q Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P 277 (435)
+ .+....+... +...+++.++...
T Consensus 144 ~~~~~~~~l~~~----------l~~~~~~~li~~~ 168 (625)
T TIGR02188 144 FGGFSAEALADR----------INDAGAKLVITAD 168 (625)
T ss_pred CCCCCHHHHHHH----------HHhcCCCEEEEcC
Confidence 5 4555555555 3445666666544
No 206
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=47.91 E-value=1.4e+02 Score=31.02 Aligned_cols=85 Identities=11% Similarity=-0.144 Sum_probs=59.9
Q ss_pred EEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCC
Q 013869 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGN 264 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (435)
..+|++.+...+..++..+ ++.++|++...++-+.-. +...++++..|+..+..+.....+-+..+
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~i--------- 144 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW--IIAMEACNSQGITYVPLYDTLGANAVEFI--------- 144 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCCCCHHHHHHH---------
Confidence 4689999888887776644 788999998888876444 33588999999999888765444444443
Q ss_pred ccccccceeccccHHHHHH
Q 013869 265 RAGEAITAFTGVPTMYTRL 283 (435)
Q Consensus 265 i~~~~~t~~~~~P~~~~~l 283 (435)
+.+.+++.++.....+..+
T Consensus 145 l~~s~~~~v~~~~~~~~~~ 163 (660)
T PLN02861 145 INHAEVSIAFVQESKISSI 163 (660)
T ss_pred HHcCCCCEEEECHHHHHHH
Confidence 4556777777765554444
No 207
>PRK07529 AMP-binding domain protein; Validated
Probab=47.87 E-value=1.4e+02 Score=30.84 Aligned_cols=96 Identities=16% Similarity=0.077 Sum_probs=60.5
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.+|++....+.. ..+...+|++.+...+..++..+ ++.+++++...+|-+.-. +..+++++..|..+-+-+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET--HFALWGGEAAGIANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCEEEeCCC
Confidence 556677665433211 12346789999888777776544 788999999998876544 345778888885433334
Q ss_pred CcchhHHHHHHHhhcCCCCCccccccceeccc
Q 013869 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (435)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 276 (435)
...++.+...+ +..++..++..
T Consensus 115 ~~~~~~i~~~l----------~~~~~~~li~~ 136 (632)
T PRK07529 115 LLEPEQIAELL----------RAAGAKVLVTL 136 (632)
T ss_pred cCCHHHHHHHH----------HhcCCcEEEEe
Confidence 45666665553 33566666553
No 208
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.63 E-value=1.8e+02 Score=29.39 Aligned_cols=91 Identities=15% Similarity=0.107 Sum_probs=61.4
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc----cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~----~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
.++.+|++. . +..+|+..+...+..+...+ ++.+++++..++|-+.-. ...+++++..|+.++..
T Consensus 37 ~p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~--~~~~la~~~~Ga~~v~l 105 (562)
T PRK05677 37 FADKPAFSN--L-------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY--PVAVFGAMRAGLIVVNT 105 (562)
T ss_pred CCCCeeEEE--C-------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeec
Confidence 456666653 1 13689999988877776543 678999999988876544 33588999999999888
Q ss_pred CCc-chhHHHHHHHhhcCCCCCccccccceeccccHH
Q 013869 244 PKF-SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM 279 (435)
Q Consensus 244 ~~~-~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~ 279 (435)
++. ..+.+... +.+-++..++.....
T Consensus 106 ~~~~~~~~l~~~----------l~~~~~~~ii~~~~~ 132 (562)
T PRK05677 106 NPLYTAREMEHQ----------FNDSGAKALVCLANM 132 (562)
T ss_pred CCCCCHHHHHHH----------HhccCceEEEEecch
Confidence 654 44444444 444566666654443
No 209
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=47.31 E-value=1.8e+02 Score=32.48 Aligned_cols=99 Identities=12% Similarity=0.043 Sum_probs=69.3
Q ss_pred cCCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHH
Q 013869 13 MARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEF 81 (435)
Q Consensus 13 ~~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~ 81 (435)
..+|.+|++. ++..+|.+.+...+...... .++.++|++...+|-. ..+
T Consensus 779 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~--------------------~~~~~~d~~l~~~p~~h~~g~ 838 (1146)
T PRK08633 779 FKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDV--------------------FNLRNDDVILSSLPFFHSFGL 838 (1146)
T ss_pred CCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHh--------------------cCCCCCCEEEEcCcHHHHHhH
Confidence 3467777764 23468888887666555432 3667788887666642 223
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
....++.+..|+.++..+.....+.+...+++.++.++...+.....+..
T Consensus 839 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 888 (1146)
T PRK08633 839 TVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLR 888 (1146)
T ss_pred HHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHh
Confidence 33466777889888877666678889999999999999999988765543
No 210
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.18 E-value=1.3e+02 Score=29.75 Aligned_cols=85 Identities=9% Similarity=-0.061 Sum_probs=58.5
Q ss_pred EEeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCC
Q 013869 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGN 264 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (435)
..+|...+...+...... .++.+++++....+-+...- ..+++++..|+.++..+.....+.+..+
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~--~~~la~~~~G~~~~~l~~~~~~~~~~~~--------- 78 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFF--EVYWAARRSGLYYTPINWHLTAAEIAYI--------- 78 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHH--HHHHHHHhcCcEEEecccccCHHHHHHH---------
Confidence 357888887777666654 46889999998888865443 3588999999999988764444333333
Q ss_pred ccccccceeccccHHHHHH
Q 013869 265 RAGEAITAFTGVPTMYTRL 283 (435)
Q Consensus 265 i~~~~~t~~~~~P~~~~~l 283 (435)
+.+.+++.++..+.....+
T Consensus 79 ~~~~~~~~ii~~~~~~~~~ 97 (502)
T PRK08276 79 VDDSGAKVLIVSAALADTA 97 (502)
T ss_pred HhcCCCCEEEEccchhhHH
Confidence 4556777777766655544
No 211
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=46.96 E-value=1.5e+02 Score=29.83 Aligned_cols=69 Identities=9% Similarity=-0.038 Sum_probs=51.9
Q ss_pred ccCCCCCeEEEEeCCCH-HHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 63 LAGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
.++.++|++..+.|-.- ......++++..|+..+...+....+.+...+++.++..+...+.....+..
T Consensus 214 ~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~ 283 (539)
T PRK07008 214 MGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLN 283 (539)
T ss_pred cCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHh
Confidence 47788998887766432 1233446778899988876677788889999999999999998887765543
No 212
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=46.77 E-value=1.2e+02 Score=28.19 Aligned_cols=58 Identities=7% Similarity=0.005 Sum_probs=44.9
Q ss_pred CCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechh
Q 013869 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (435)
Q Consensus 66 ~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (435)
.+++.|... ..+-.-..+.++|...|..++.+-|...+......++..++++++++.+
T Consensus 49 ~~~~~vv~a-SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 49 NECVHVVCS-SGGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred ccCCeEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 345555444 4567777888889999999888877666677788999999999999876
No 213
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=46.42 E-value=1.2e+02 Score=30.54 Aligned_cols=84 Identities=8% Similarity=-0.043 Sum_probs=60.9
Q ss_pred EeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCc-chhHHHHHHHhhcCCCCC
Q 013869 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (435)
.+|.+.+...+..+...+ ++.+++++..+.|-.... +..+++++..|+.++..+.. ....+...
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~---------- 113 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTALRGPQLEHI---------- 113 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccccCHHHHHHH----------
Confidence 688999888877776644 678899988887776554 34688999999999988654 44454444
Q ss_pred ccccccceeccccHHHHHHH
Q 013869 265 RAGEAITAFTGVPTMYTRLI 284 (435)
Q Consensus 265 i~~~~~t~~~~~P~~~~~l~ 284 (435)
+++.+++.++..+.....+.
T Consensus 114 l~~~~~~~l~~~~~~~~~~~ 133 (542)
T PRK06155 114 LRNSGARLLVVEAALLAALE 133 (542)
T ss_pred HHhcCceEEEEChhhHHHHH
Confidence 55578888887776665543
No 214
>PRK07476 eutB threonine dehydratase; Provisional
Probab=46.34 E-value=2.5e+02 Score=26.11 Aligned_cols=56 Identities=7% Similarity=-0.057 Sum_probs=42.7
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
+....+-.-..+.++|...|..++.+-|...+......++..++++++++.++...
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 126 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQDDA 126 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 34455677777888888999988777666566667788999999999998765443
No 215
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=46.11 E-value=2.1e+02 Score=30.29 Aligned_cols=117 Identities=14% Similarity=0.056 Sum_probs=74.7
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc------cCCCC-----------CeeEEeecchhhhHHHHHH
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW------EYTSA-----------DQFLHCLPLHHVHGLFNAL 230 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~------~~~~~-----------~~~l~~~pl~~~~g~~~~~ 230 (435)
.++.+|++....| .+ -..+|++.+...+..++..+ ++.++ +++..+.+-+.-. +...
T Consensus 74 ~p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew--~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINW--LVAD 147 (746)
T ss_pred cCCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHH--HHHH
Confidence 4567776533222 11 24688998888777766543 56676 7887777765333 3468
Q ss_pred HHHHHcCCEEEEcCC-cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHHHhhhccccHHHHHHhhhhccccEEEE
Q 013869 231 LAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (435)
Q Consensus 231 ~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~i~ 309 (435)
++++..|+..+.+.. +.++.+... +..-++++++..+..+..+.+.. ..++.++.++
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~i----------l~~s~~~~lv~~~~~~~~l~~~~------------~~~~~l~~ii 205 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDI----------LNETKLEWLCLDLDLVEGLLERK------------NELPHLKKLI 205 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHH----------HhcCCCCEEEEcHHHHHHHHHhh------------ccCCCceEEE
Confidence 899999999988865 444554444 55578888888777776665421 1345677766
Q ss_pred ecC
Q 013869 310 CGS 312 (435)
Q Consensus 310 ~~G 312 (435)
+-+
T Consensus 206 ~~~ 208 (746)
T PTZ00342 206 ILD 208 (746)
T ss_pred EEC
Confidence 644
No 216
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=45.65 E-value=2.1e+02 Score=28.33 Aligned_cols=67 Identities=9% Similarity=0.007 Sum_probs=50.4
Q ss_pred ccCCCCCeEEEEeCCCHH--HHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHH
Q 013869 63 LAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (435)
.+++++|++....+-... +...+++.+..|...+..+.......+...+++.++.++...+..+..+
T Consensus 198 ~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~ 266 (508)
T TIGR02262 198 LGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAM 266 (508)
T ss_pred cCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHH
Confidence 477889988777665432 3334566778898888777666788889999999999999999765543
No 217
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=45.25 E-value=2.2e+02 Score=28.40 Aligned_cols=97 Identities=11% Similarity=0.094 Sum_probs=66.1
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHH--
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV-- 82 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~-- 82 (435)
.++.+|++. ++..+|...+...+..... . +++.++|++...+|..-.+-
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~-----------------~~~~~~d~~l~~~P~~h~~~~~ 240 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---I-----------------CWLTQQTRYLCALPAAHNYPLS 240 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh---h-----------------cCCCcCCEEEECCChHhhhhhh
Confidence 456667763 2346788887666554333 2 46788998888777553222
Q ss_pred H-HHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 83 A-GVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 83 ~-~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
. ..++++..|+..+..+ ...+..+...+++.++.++...+.....+..
T Consensus 241 ~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 289 (527)
T TIGR02275 241 SPGALGVFYAGGCVVLAP-DPSPTDCFPLIERHKVTVTALVPPAVALWMQ 289 (527)
T ss_pred HHHHHHHHhcCCeEEECC-CCCHHHHHHHHHHhCCeEEEecHHHHHHHHh
Confidence 2 3577788888877644 4467778889999999999999988765543
No 218
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=45.09 E-value=1.3e+02 Score=30.23 Aligned_cols=81 Identities=15% Similarity=0.040 Sum_probs=56.7
Q ss_pred EEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcc-hhHHHHHHHhhcCCCC
Q 013869 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFS-VRGIWQRWRESYPVNG 263 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~-~~~~~~~~~~~~~~~~ 263 (435)
..+|+.++...+..+...+ ++.+++++..+++-+.-.- ..+++++..|+..+..++.. .......
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~--~~~la~~~~G~~~v~v~~~~~~~~~~~~--------- 115 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYP--VAIAAVLRAGYVVVNVNPLYTPRELEHQ--------- 115 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH--HHHHHHHhcCeEEeccCcccCHHHHHHH---------
Confidence 4689999988777776644 6888999988888765443 35889999999999886644 3444333
Q ss_pred CccccccceeccccHHH
Q 013869 264 NRAGEAITAFTGVPTMY 280 (435)
Q Consensus 264 ~i~~~~~t~~~~~P~~~ 280 (435)
+++.+++.++......
T Consensus 116 -~~~~~~~~vi~~~~~~ 131 (557)
T PRK07059 116 -LKDSGAEAIVVLENFA 131 (557)
T ss_pred -HHccCceEEEEchhhH
Confidence 4556777776655443
No 219
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=44.99 E-value=1.8e+02 Score=30.21 Aligned_cols=92 Identities=25% Similarity=0.266 Sum_probs=61.8
Q ss_pred CCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC
Q 013869 169 GEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK 245 (435)
Q Consensus 169 ~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~ 245 (435)
.++++++.... +| ....+|++.+...+..++..+ ++.++|++...+|-.--. +..+++++..|+..+...+
T Consensus 98 ~~~~a~~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~--~~~~lA~~~~Gav~vp~~~ 171 (652)
T TIGR01217 98 GTEPALLYVDE--TH--EPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA--VVAMLATASVGAIWSSCSP 171 (652)
T ss_pred CCCeEEEEECC--CC--CeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCeEEEecCC
Confidence 45666555322 22 135689999988888777654 788999999999886444 3358899999988887764
Q ss_pred -cchhHHHHHHHhhcCCCCCccccccceeccc
Q 013869 246 -FSVRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (435)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 276 (435)
+....+...+ ++.++..++..
T Consensus 172 ~~~~~~l~~~l----------~~~~~k~li~~ 193 (652)
T TIGR01217 172 DFGARGVLDRF----------QQIEPKLLFTV 193 (652)
T ss_pred CCCHHHHHHHH----------HhcCCcEEEEc
Confidence 5555555553 33556555544
No 220
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=44.48 E-value=1.1e+02 Score=28.25 Aligned_cols=70 Identities=11% Similarity=0.156 Sum_probs=54.6
Q ss_pred ccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHHhc
Q 013869 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK 135 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~ 135 (435)
.|+++|.+|+|..--+.-.+.+.+|. ..|..++.++...+ .-+..++..+++..+...+..+.+.++...
T Consensus 177 ~g~~pG~~vgI~GlGGLGh~aVq~AK-AMG~rV~vis~~~~--kkeea~~~LGAd~fv~~~~d~d~~~~~~~~ 246 (360)
T KOG0023|consen 177 SGLGPGKWVGIVGLGGLGHMAVQYAK-AMGMRVTVISTSSK--KKEEAIKSLGADVFVDSTEDPDIMKAIMKT 246 (360)
T ss_pred cCCCCCcEEEEecCcccchHHHHHHH-HhCcEEEEEeCCch--hHHHHHHhcCcceeEEecCCHHHHHHHHHh
Confidence 48889999999999899999999998 55877777876532 346678899999999887666666665443
No 221
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=44.32 E-value=2.3e+02 Score=25.88 Aligned_cols=60 Identities=12% Similarity=-0.028 Sum_probs=44.8
Q ss_pred CCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhh
Q 013869 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY 125 (435)
Q Consensus 65 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 125 (435)
+.+|+.| +....+-.-..+.+++...|..+..+-|...+......++..++++++++.++
T Consensus 54 ~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 54 LKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred CCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 3667766 55555666777777888899988777665554556788999999999998754
No 222
>PRK09088 acyl-CoA synthetase; Validated
Probab=44.19 E-value=1.9e+02 Score=28.34 Aligned_cols=77 Identities=13% Similarity=-0.060 Sum_probs=52.1
Q ss_pred EeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCc-chhHHHHHHHhhcCCCCC
Q 013869 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (435)
.+|++.+...+..+...+ ++.+++++..+++-.... +..+++++..|+.++..++. ....+...
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~--~~~~la~~~~G~~~v~~~~~~~~~~~~~~---------- 89 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL--VALHFACARVGAIYVPLNWRLSASELDAL---------- 89 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEEeeCccCCHHHHHHH----------
Confidence 689999877777665543 678889998887776554 34588899999998887654 44444444
Q ss_pred ccccccceecccc
Q 013869 265 RAGEAITAFTGVP 277 (435)
Q Consensus 265 i~~~~~t~~~~~P 277 (435)
+++.+++.++...
T Consensus 90 ~~~~~~~~ii~~~ 102 (488)
T PRK09088 90 LQDAEPRLLLGDD 102 (488)
T ss_pred HHhCCCCEEEEcc
Confidence 3335555555443
No 223
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=43.98 E-value=1.4e+02 Score=30.18 Aligned_cols=95 Identities=19% Similarity=0.178 Sum_probs=64.6
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.+|++.. + -.+|++++...+..++..+ ++..+|++..+.|-..-. +..+++++..|+.++..+
T Consensus 45 ~p~~~a~~~~-----~----~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~v~l~ 113 (573)
T PRK05605 45 FGDRPALDFF-----G----ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH--IVAFYAVLRLGAVVVEHN 113 (573)
T ss_pred CCCCeEEEeC-----C----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeecC
Confidence 4566666542 1 1479999888777776644 678899999888875543 345888999999998776
Q ss_pred C-cchhHHHHHHHhhcCCCCCccccccceeccccHHHHHH
Q 013869 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (435)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 283 (435)
+ +....+... +.+.+++.++..+..+..+
T Consensus 114 ~~~~~~~l~~~----------l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 114 PLYTAHELEHP----------FEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred cCCCHHHHHHH----------HhccCCcEEEechhhHHHH
Confidence 5 444454444 5557778777766655444
No 224
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=43.81 E-value=1.9e+02 Score=28.97 Aligned_cols=97 Identities=11% Similarity=0.094 Sum_probs=67.2
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH---
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF--- 81 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~--- 81 (435)
.++.+|++. ++..+|.+.+...+...... .++.++|++...+|-.-.+
T Consensus 180 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~--------------------~~~~~~~~~l~~~p~~h~~~~~ 239 (536)
T PRK10946 180 PADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEI--------------------CGFTPQTRYLCALPAAHNYPMS 239 (536)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHh--------------------cCCCCCceEEEecCccccccch
Confidence 356666663 23468888887766654433 3678899888877654322
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
....++++..|+..+... ......+...+++.++.++...+.....+..
T Consensus 240 ~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 288 (536)
T PRK10946 240 SPGALGVFLAGGTVVLAP-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQ 288 (536)
T ss_pred hhhHHHHhhcCcEEEECC-CCCHHHHHHHHHHhCCcEEEeChHHHHHHHh
Confidence 124678888899887654 4456677888999999999999887766544
No 225
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=43.80 E-value=1.9e+02 Score=27.25 Aligned_cols=82 Identities=15% Similarity=0.152 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCC--------
Q 013869 30 DQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-------- 101 (435)
Q Consensus 30 ~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-------- 101 (435)
.++......++..|.+. ..-+.++..+..+.+++.+|+..++++++-+.-.
T Consensus 50 ~~~~~~~~~~~~~~~~~---------------------~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~~~ 108 (346)
T PF02350_consen 50 KSTGLAIIELADVLERE---------------------KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDRTE 108 (346)
T ss_dssp HHHHHHHHHHHHHHHHH---------------------T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-TTS
T ss_pred HHHHHHHHHHHHHHHhc---------------------CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCccccCC
Confidence 55556667777777774 2235567778999999999999999999998655
Q ss_pred -CCHHHHHHHHhcCCccEEEechhhHHHHHHH
Q 013869 102 -YPESELLHVMHDSDISMVLSTEDYREVLQNV 132 (435)
Q Consensus 102 -~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (435)
.+++...+.+.+..--+....+....++...
T Consensus 109 g~~de~~R~~i~~la~lhf~~t~~~~~~L~~~ 140 (346)
T PF02350_consen 109 GMPDEINRHAIDKLAHLHFAPTEEARERLLQE 140 (346)
T ss_dssp STTHHHHHHHHHHH-SEEEESSHHHHHHHHHT
T ss_pred CCchhhhhhhhhhhhhhhccCCHHHHHHHHhc
Confidence 6666677777777666666666666666554
No 226
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=43.60 E-value=1.5e+02 Score=29.45 Aligned_cols=85 Identities=8% Similarity=-0.016 Sum_probs=58.7
Q ss_pred EeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCc
Q 013869 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNR 265 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i 265 (435)
.+|+..+...+..+... .++.+++++..+.|-..-. +..+++++..|+..+..+...+.+.+..+ +
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~~~~~---------l 79 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAF--FEAAYAAMRLGAYAVPVNWHFKPEEIAYI---------L 79 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecCcccCHHHHHHH---------H
Confidence 57888887766666554 4688999999888875543 34588899999999888764443333333 5
Q ss_pred cccccceeccccHHHHHHH
Q 013869 266 AGEAITAFTGVPTMYTRLI 284 (435)
Q Consensus 266 ~~~~~t~~~~~P~~~~~l~ 284 (435)
+..+++.++........+.
T Consensus 80 ~~~~~~~i~~~~~~~~~~~ 98 (509)
T PRK12406 80 EDSGARVLIAHADLLHGLA 98 (509)
T ss_pred hccCCcEEEEccchhhhhh
Confidence 5678888877766655543
No 227
>PRK13390 acyl-CoA synthetase; Provisional
Probab=43.49 E-value=2.9e+02 Score=27.27 Aligned_cols=78 Identities=17% Similarity=0.120 Sum_probs=53.0
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.++++... +| ..+|+..+...+..++..+ ++.+++++....+-+... +..+++++..|+..+..+
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~--~~~~la~~~~Ga~~~~l~ 80 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEA--LVVLWAALRSGLYITAIN 80 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEeccc
Confidence 45666654421 22 3689999988777776644 688999998888776544 346889999999988776
Q ss_pred CcchhHHHHH
Q 013869 245 KFSVRGIWQR 254 (435)
Q Consensus 245 ~~~~~~~~~~ 254 (435)
...+...+..
T Consensus 81 ~~~~~~~~~~ 90 (501)
T PRK13390 81 HHLTAPEADY 90 (501)
T ss_pred cCCCHHHHHH
Confidence 6444433333
No 228
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=43.00 E-value=76 Score=21.32 Aligned_cols=46 Identities=13% Similarity=0.340 Sum_probs=33.1
Q ss_pred eecCCCeEEEecCCCCCCCCccceEEEecCCccccccCCchhcccccccCCccccCceEEEcCCccEEEec
Q 013869 359 NPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILG 429 (435)
Q Consensus 359 ~p~~~~~~~i~d~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~g 429 (435)
++-.+.++++.. |.+|+.-.. + ..|-|+..||-..+...+.+++.+
T Consensus 13 r~~~~~~l~v~~----------G~vWlT~~g-------~--------~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 13 RAAAGQRLRVES----------GRVWLTREG-------D--------PDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred EcCCCcEEEEcc----------ccEEEECCC-------C--------CCCEEECCCCEEEeCCCCEEEEEe
Confidence 344566677766 899986432 1 136699999999998888888875
No 229
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=42.72 E-value=1.4e+02 Score=28.97 Aligned_cols=60 Identities=8% Similarity=-0.071 Sum_probs=46.6
Q ss_pred EEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHH
Q 013869 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (435)
Q Consensus 71 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (435)
-.+....+-.-+.+.++|...|..++.+-|...+.+....++..+++++.++.++.....
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a~~ 195 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKAVE 195 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHHHH
Confidence 345566678888888899999988877766666666788899999999999876655433
No 230
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=42.52 E-value=51 Score=23.24 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=29.9
Q ss_pred ccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEE
Q 013869 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAV 96 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 96 (435)
+|++.|+.++.+..+..|.+..+=|++++.-+-+
T Consensus 10 agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 10 AGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred cCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 7999999999999999999999888888875544
No 231
>PRK05850 acyl-CoA synthetase; Validated
Probab=42.46 E-value=2.9e+02 Score=27.95 Aligned_cols=102 Identities=12% Similarity=0.060 Sum_probs=65.4
Q ss_pred CCCCcEEEEecC-CC-CCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEE
Q 013869 168 RGEDPALIVYTS-GT-TGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEF 242 (435)
Q Consensus 168 ~~~~~~~i~~TS-Gt-TG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~ 242 (435)
.++.++++.... +. .| +...+|+..+...+..++..+ + .+++++...++-+.-. +..+++++..|+.++.
T Consensus 14 ~p~~~a~~~~~~~~~~~~--~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~--~~~~lA~~~~G~v~vp 88 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAG--VAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEY--IVAFLGALQAGLIAVP 88 (578)
T ss_pred CCCceEEEEEccCCCCCC--ceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccH--HHHHHHHHHcCceEEe
Confidence 456666654321 11 12 135789999887777766544 3 4678988888876433 3468899999999998
Q ss_pred cCCc----chhHHHHHHHhhcCCCCCccccccceeccccHHHHHHH
Q 013869 243 MPKF----SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLI 284 (435)
Q Consensus 243 ~~~~----~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 284 (435)
.+.. ....+... ++..++..++..+.....+.
T Consensus 89 l~~~~~~~~~~~l~~~----------l~~~~~~~il~~~~~~~~~~ 124 (578)
T PRK05850 89 LSVPQGGAHDERVSAV----------LRDTSPSVVLTTSAVVDDVT 124 (578)
T ss_pred cCCCCccchHHHHHHH----------HHhcCCCEEEEcHHHHHHHH
Confidence 8742 23333333 55578888888777666553
No 232
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=42.35 E-value=1.3e+02 Score=29.38 Aligned_cols=61 Identities=8% Similarity=-0.084 Sum_probs=47.1
Q ss_pred EEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 71 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
-.+....+-.-..+.++|..+|..++.+-|...+......++..+++++++..++......
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a~~~ 214 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVAVEE 214 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHHHHH
Confidence 4455666677888888888999888777666666667888999999999999877655443
No 233
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=42.34 E-value=1.6e+02 Score=27.03 Aligned_cols=56 Identities=14% Similarity=0.096 Sum_probs=42.0
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
+....+-.-..+.++|...|..++.+-|...+......++..++++++++.++...
T Consensus 69 v~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~~~~~ 124 (304)
T cd01562 69 VAASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGEDFDEA 124 (304)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHHHH
Confidence 33455777777888888999888776565555566788999999999998865544
No 234
>PRK13391 acyl-CoA synthetase; Provisional
Probab=42.34 E-value=2.8e+02 Score=27.43 Aligned_cols=96 Identities=13% Similarity=0.077 Sum_probs=62.8
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.++.+...++ ..+|+..+...+..+...+ ++.+++++..+.+-+.-.- ..+++++..|..++..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~--~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYL--EVCWAAERSGLYYTCVN 80 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHhccEEeccc
Confidence 4556665544332 2589998887777766644 6788999988877765443 35888999999998886
Q ss_pred Cc-chhHHHHHHHhhcCCCCCccccccceeccccHHHHH
Q 013869 245 KF-SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (435)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 282 (435)
.. +....... ++..++..++..+.....
T Consensus 81 ~~~~~~~l~~~----------l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 81 SHLTPAEAAYI----------VDDSGARALITSAAKLDV 109 (511)
T ss_pred cccCHHHHHHH----------HhccCCcEEEEchhhHHH
Confidence 54 33444333 455667776666655433
No 235
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=42.14 E-value=1.6e+02 Score=29.57 Aligned_cols=77 Identities=17% Similarity=0.030 Sum_probs=52.1
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.++++. . +| ..+|+..+...+..+... .++.+++++..++|-+--. +..+++++..|+.++..+
T Consensus 36 ~pd~~a~~~-~---~~----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~ 105 (547)
T PRK06087 36 MPDKIAVVD-N---HG----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEF--TIIYLACLKVGAVSVPLL 105 (547)
T ss_pred CCCceEEEc-C---CC----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEeccc
Confidence 456666553 1 22 368999988777776654 4788999998887775433 346889999999988776
Q ss_pred Cc-chhHHHHH
Q 013869 245 KF-SVRGIWQR 254 (435)
Q Consensus 245 ~~-~~~~~~~~ 254 (435)
+. ....+...
T Consensus 106 ~~~~~~~l~~~ 116 (547)
T PRK06087 106 PSWREAELVWV 116 (547)
T ss_pred hhcCHHHHHHH
Confidence 53 33444343
No 236
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=41.87 E-value=2.9e+02 Score=28.46 Aligned_cols=94 Identities=22% Similarity=0.256 Sum_probs=61.9
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.+|++.. +..+|. .-.+|++.+...+..++..+ ++.++|++...+|..--. +..+++++..|+..+...
T Consensus 65 ~p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~--v~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 65 RGEQLALVTV-SSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEA--VFAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCCEEEecC
Confidence 4566776543 222221 24689999888777776544 789999999999886433 346889999999988775
Q ss_pred C-cchhHHHHHHHhhcCCCCCccccccceeccc
Q 013869 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (435)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 276 (435)
. +....+... +...+++.++..
T Consensus 140 ~~~~~~~l~~~----------l~~~~~~~li~~ 162 (628)
T TIGR02316 140 GGFASHSLALR----------IDDATPKLIVSA 162 (628)
T ss_pred CCCCHHHHHHH----------HHhcCceEEEEC
Confidence 4 555555555 333556655543
No 237
>PRK06060 acyl-CoA synthetase; Validated
Probab=41.82 E-value=1.5e+02 Score=31.04 Aligned_cols=91 Identities=22% Similarity=0.160 Sum_probs=60.9
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.++++. + . .+|++.+...+..+...+ ++.+++++..+++-+.-. +..+++++..|+..+..+
T Consensus 19 ~pd~~a~~~---~-----~--~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~--~~~~la~~~aG~~~vpi~ 86 (705)
T PRK06060 19 WYDRPAFYA---A-----D--VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDL--VQLLLACLARGVMAFLAN 86 (705)
T ss_pred CCCceEEEe---c-----C--ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEecC
Confidence 456777652 1 1 489999888777766544 688999999888876554 346889999999888877
Q ss_pred CcchhHHHHHHHhhcCCCCCccccccceeccccHH
Q 013869 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM 279 (435)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~ 279 (435)
+..+..-+..+ ++..++..++.....
T Consensus 87 p~~~~~~l~~~---------l~~~~~~~vi~~~~~ 112 (705)
T PRK06060 87 PELHRDDHALA---------ARNTEPALVVTSDAL 112 (705)
T ss_pred CCCCHHHHHHH---------HhcCCCcEEEEchHH
Confidence 65444444443 444566666554443
No 238
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=41.69 E-value=2.9e+02 Score=30.92 Aligned_cols=97 Identities=10% Similarity=0.107 Sum_probs=66.7
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHHH
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~~ 82 (435)
.|+.+|++. ++..+|.+.+...+......+ ++.++|++...+|-. ..+.
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~--------------------~~~~~d~~l~~~pl~h~~g~~ 850 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI--------------------DFSPEDKVFNALPVFHSFGLT 850 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh--------------------CCCCcCEEEEecchHHHHHHH
Confidence 466677663 224688888876666555433 667899988877753 2233
Q ss_pred HHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHH
Q 013869 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (435)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (435)
...+..+..|...+..+.....+.+...+++.++.++...+.....+.
T Consensus 851 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 898 (1140)
T PRK06814 851 GGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYA 898 (1140)
T ss_pred HHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHH
Confidence 456667788988887665555566778889999999999887765543
No 239
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=40.74 E-value=4.1e+02 Score=27.18 Aligned_cols=102 Identities=11% Similarity=0.033 Sum_probs=65.0
Q ss_pred CCCCcEEEEec--CCCCCCCceEEeehHHHHHHHHHHHHhc--cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 168 RGEDPALIVYT--SGTTGKPKGVVHTHKSIDAQVQMLTEAW--EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 168 ~~~~~~~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
.++.++++... .+++|. ...+|+..+...+..++..+ .+.+++++...++-..-. +..+++++..|+.++.+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~--~~~~lA~~~aG~v~vpl 122 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDY--VAGFFAAIKAGTIAVPL 122 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhH--HHHHHHHHHcCceeEec
Confidence 45667765432 112232 34689999888777766654 267889998888886543 44688999999998876
Q ss_pred -CCcc---hhHHHHHHHhhcCCCCCccccccceeccccHHHHHH
Q 013869 244 -PKFS---VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (435)
Q Consensus 244 -~~~~---~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 283 (435)
+... .+.+... ++..++..++..+..+..+
T Consensus 123 ~~~~~~~~~~~l~~~----------l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 123 FAPELPGHAERLDTA----------LRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCCCcchhHHHHHHH----------HHhCCCCEEEEcHHHHHHH
Confidence 3322 2333333 5557788888776655544
No 240
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=40.33 E-value=1.7e+02 Score=29.44 Aligned_cols=94 Identities=17% Similarity=0.164 Sum_probs=63.5
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh----ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA----WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~----~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
.++.++++.. | ..+|+..+...+..++.. .++.+++++..++|-..-. ...+++++..|+..+..
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY--PIATFGVLRAGLTVVNV 106 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEecc
Confidence 4667776542 1 258999988877777653 4788899998888776443 34688899999999977
Q ss_pred CC-cchhHHHHHHHhhcCCCCCccccccceeccccHHHHH
Q 013869 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (435)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 282 (435)
++ +....+... +.+.+++.++........
T Consensus 107 ~p~~~~~~~~~~----------l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 107 NPLYTPRELKHQ----------LIDSGASVLVVIDNFGTT 136 (560)
T ss_pred CccCCHHHHHHH----------HHhcCCeEEEEcchhHHH
Confidence 65 444554444 445677777766554433
No 241
>PRK05852 acyl-CoA synthetase; Validated
Probab=39.78 E-value=3.5e+02 Score=26.99 Aligned_cols=88 Identities=13% Similarity=0.052 Sum_probs=61.5
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHHHHHHHHHHHhCCeEEeC-CCC
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPL-ALS 101 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l-~~~ 101 (435)
..+|+..+...+..+... ++++++|++....+-. ..++..+++++..|...+.- ...
T Consensus 194 v~~~~~~~~~~~~~~~~~--------------------~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~ 253 (534)
T PRK05852 194 VPWTHANIASSVRAIITG--------------------YRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGR 253 (534)
T ss_pred EEecHHHHHHHHHHHHHH--------------------hCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcC
Confidence 457888887666655543 3667888888777654 34455677777777765532 335
Q ss_pred CCHHHHHHHHhcCCccEEEechhhHHHHHHH
Q 013869 102 YPESELLHVMHDSDISMVLSTEDYREVLQNV 132 (435)
Q Consensus 102 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (435)
.+...+...+++.++..++..+.....+...
T Consensus 254 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 284 (534)
T PRK05852 254 FSAHTFWDDIKAVGATWYTAVPTIHQILLER 284 (534)
T ss_pred cCHHHHHHHHHHcCCcEEEcChHHHHHHHhh
Confidence 5677888889999999999999887766543
No 242
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=39.69 E-value=1.3e+02 Score=28.61 Aligned_cols=58 Identities=17% Similarity=0.084 Sum_probs=46.6
Q ss_pred CeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 69 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
..|+-...| ....+.+|+.++|+.+..+-|..++......++..++.+++...++.+.
T Consensus 116 gViasSaGN--ha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~deA 173 (457)
T KOG1250|consen 116 GVIASSAGN--HAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWDEA 173 (457)
T ss_pred ceEEecCcc--HHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHHHH
Confidence 345544555 4566789999999999888888888888889999999999998876653
No 243
>PRK07787 acyl-CoA synthetase; Validated
Probab=38.81 E-value=3.3e+02 Score=26.60 Aligned_cols=85 Identities=11% Similarity=-0.004 Sum_probs=59.8
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHHHHHHHHHHHhCCeEEeCCCCC
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSY 102 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~ 102 (435)
..+|+..+...+..+... .++.++|++....+-. .-++..+++.+..|+.++... ..
T Consensus 146 v~~t~~~l~~~~~~~~~~--------------------~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~ 204 (471)
T PRK07787 146 VVLSRRAIAADLDALAEA--------------------WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RP 204 (471)
T ss_pred EEEeHHHHHHHHHHHHHh--------------------cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CC
Confidence 357888887766555443 3567788776655532 234556788889999988765 45
Q ss_pred CHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 103 PESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
.+..+...++ .++..+...+..+..+..
T Consensus 205 ~~~~~~~~i~-~~~t~~~~~P~~~~~l~~ 232 (471)
T PRK07787 205 TPEAYAQALS-EGGTLYFGVPTVWSRIAA 232 (471)
T ss_pred CHHHHHHHHh-hCceEEEcchHHHHHHHh
Confidence 6778888888 899999988887665443
No 244
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=38.72 E-value=1.6e+02 Score=29.72 Aligned_cols=78 Identities=13% Similarity=0.106 Sum_probs=54.1
Q ss_pred EEeehHHHHHHHHHHHHhc----cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCc-chhHHHHHHHhhcCCC
Q 013869 188 VVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVN 262 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~----~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~~~~~~~~~ 262 (435)
..+|+..+...+..+...+ ++.++|++..+++-+.-. ...+++++..|+..+..+.. ....+...
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~--~~~~la~~~~G~v~v~~~~~~~~~~l~~~-------- 117 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQY--PIAVFGALRAGLIVVNTNPLYTAREMRHQ-------- 117 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeccCccCCHHHHHHH--------
Confidence 4689999988877776644 678899998887775543 34688999999998877654 44444444
Q ss_pred CCccccccceecccc
Q 013869 263 GNRAGEAITAFTGVP 277 (435)
Q Consensus 263 ~~i~~~~~t~~~~~P 277 (435)
+...++..++..+
T Consensus 118 --l~~~~~~~~i~~~ 130 (562)
T PRK12492 118 --FKDSGARALVYLN 130 (562)
T ss_pred --HhccCceEEEecc
Confidence 4445666665544
No 245
>PLN02574 4-coumarate--CoA ligase-like
Probab=38.59 E-value=3.5e+02 Score=27.29 Aligned_cols=101 Identities=15% Similarity=0.128 Sum_probs=63.0
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHH---
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF--- 81 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~--- 81 (435)
.++.+|++. ++..+|++.+...+..+....... .+...++.+.+..-+-.+.
T Consensus 196 ~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~~pl~h~~g~ 259 (560)
T PLN02574 196 KQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQ----------------YEYPGSDNVYLAALPMFHIYGL 259 (560)
T ss_pred CcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccc----------------cccCCCCcEEEEecchHHHHHH
Confidence 345666653 134689988887766665443332 2333334444333222222
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
...+++.+..|+..+..+ .....++...+++.++.++...+.....+..
T Consensus 260 ~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 308 (560)
T PLN02574 260 SLFVVGLLSLGSTIVVMR-RFDASDMVKVIDRFKVTHFPVVPPILMALTK 308 (560)
T ss_pred HHHHHHHHhcCCEEEEec-CCCHHHHHHHHHHcCCeEEecCCHHHHHHHh
Confidence 233456667798887664 4678889999999999999999988776544
No 246
>PRK08162 acyl-CoA synthetase; Validated
Probab=38.45 E-value=1.7e+02 Score=29.31 Aligned_cols=83 Identities=14% Similarity=0.029 Sum_probs=60.1
Q ss_pred EeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC-cchhHHHHHHHhhcCCCCC
Q 013869 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (435)
.+|+..+...+..++..+ ++..++++....|-..-. +..+++++..|+..+..+. .....+...
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~~~~~---------- 110 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAM--VEAHFGVPMAGAVLNTLNTRLDAASIAFM---------- 110 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEEeccccccChHHHHHH----------
Confidence 589999888777776654 688899999888886544 3468889999998887765 444555444
Q ss_pred ccccccceeccccHHHHHH
Q 013869 265 RAGEAITAFTGVPTMYTRL 283 (435)
Q Consensus 265 i~~~~~t~~~~~P~~~~~l 283 (435)
++..+++.++..+.....+
T Consensus 111 l~~~~~~~i~~~~~~~~~~ 129 (545)
T PRK08162 111 LRHGEAKVLIVDTEFAEVA 129 (545)
T ss_pred HHhCCCeEEEEccchhhHH
Confidence 5557888888777665544
No 247
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=38.29 E-value=33 Score=30.12 Aligned_cols=39 Identities=18% Similarity=0.352 Sum_probs=24.7
Q ss_pred cceEEEecCCccccccCCchhcccccccCCccccCceEEE---------c-CCccEEEeccccc
Q 013869 380 VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQ---------D-EDGYYIILGRKGI 433 (435)
Q Consensus 380 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~g~~---------~-~dG~l~~~gR~~d 433 (435)
++|||+. |||+.+ -||+.|.++||. + .-|+++|..+..|
T Consensus 175 iaELC~S---------DDP~Yt------TGYVA~~~~GY~RI~~mK~~G~~~GGRvffv~~~~d 223 (239)
T PF03744_consen 175 IAELCWS---------DDPDYT------TGYVASKKFGYHRITNMKEAGSPKGGRVFFVDGSID 223 (239)
T ss_pred eEEEEec---------CCCCCc------eEEEEeCCcceEECccccccCCCCCCEEEEEeCCCC
Confidence 6888864 344432 377788787766 2 2378888876544
No 248
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=38.29 E-value=1.1e+02 Score=28.68 Aligned_cols=57 Identities=14% Similarity=0.150 Sum_probs=45.1
Q ss_pred ccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech
Q 013869 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
.++++|++|+|+.--+.-.+++.+|-. +|+.++-++.+ ++.....++.+++.++...
T Consensus 162 ~~~~pG~~V~I~G~GGlGh~avQ~Aka-~ga~Via~~~~---~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 162 ANVKPGKWVAVVGAGGLGHMAVQYAKA-MGAEVIAITRS---EEKLELAKKLGADHVINSS 218 (339)
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHH-cCCeEEEEeCC---hHHHHHHHHhCCcEEEEcC
Confidence 489999999999887999999998874 45777777654 3345567899999999975
No 249
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=38.15 E-value=4.8e+02 Score=27.11 Aligned_cols=82 Identities=10% Similarity=-0.179 Sum_probs=56.6
Q ss_pred EEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCC
Q 013869 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGN 264 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (435)
..+|++.+...+..++..+ ++.++|++...++-..-.- ...++++..|+..+........+.+..+
T Consensus 75 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~--~~~lA~~~~G~v~vpl~~~~~~~~l~~i--------- 143 (660)
T PLN02430 75 MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWI--VAMEACAAHSLICVPLYDTLGPGAVDYI--------- 143 (660)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEeccCCCHHHHHHH---------
Confidence 3468998888777766544 7889999888888755443 3588899999998888664444433433
Q ss_pred ccccccceeccccHHH
Q 013869 265 RAGEAITAFTGVPTMY 280 (435)
Q Consensus 265 i~~~~~t~~~~~P~~~ 280 (435)
+...+++.++.....+
T Consensus 144 l~~~~~~~v~~~~~~~ 159 (660)
T PLN02430 144 VDHAEIDFVFVQDKKI 159 (660)
T ss_pred HhccCCCEEEECHHHH
Confidence 4556777777665433
No 250
>PRK13382 acyl-CoA synthetase; Provisional
Probab=37.87 E-value=2.2e+02 Score=28.53 Aligned_cols=82 Identities=15% Similarity=0.058 Sum_probs=57.3
Q ss_pred EeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCCc
Q 013869 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNR 265 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i 265 (435)
.+|+..+...+..++..+ ++.+++++...++-.-. .+..+++++..|+.++..++..+...+..+ +
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~---------l 136 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG--FVEALLAANRIGADILLLNTSFAGPALAEV---------V 136 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH--HHHHHHHHHHcCcEEEecCcccCHHHHHHH---------H
Confidence 688888877777766644 67889999888876544 344688999999999988765444434443 4
Q ss_pred cccccceeccccHHHH
Q 013869 266 AGEAITAFTGVPTMYT 281 (435)
Q Consensus 266 ~~~~~t~~~~~P~~~~ 281 (435)
.+.+++.++.......
T Consensus 137 ~~~~~~~vi~~~~~~~ 152 (537)
T PRK13382 137 TREGVDTVIYDEEFSA 152 (537)
T ss_pred HhcCCCEEEEchhhHH
Confidence 5567777776655443
No 251
>PRK06382 threonine dehydratase; Provisional
Probab=37.35 E-value=3.8e+02 Score=25.90 Aligned_cols=56 Identities=16% Similarity=0.175 Sum_probs=42.6
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
+....+-....+.++|...|..+..+-|...+......++..+++++++..++.+.
T Consensus 77 v~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~a 132 (406)
T PRK06382 77 ITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDEA 132 (406)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHHH
Confidence 34555666777788999999888777666666666778999999999998765544
No 252
>PRK06178 acyl-CoA synthetase; Validated
Probab=37.27 E-value=2e+02 Score=29.02 Aligned_cols=84 Identities=11% Similarity=0.029 Sum_probs=59.1
Q ss_pred EeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcch-hHHHHHHHhhcCCCCC
Q 013869 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV-RGIWQRWRESYPVNGN 264 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 264 (435)
.+|+..+...+..+...+ ++..++++...+|-+.-. ...+++++..|+..+..++... ..+...
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~p~~~~~~~~~~---------- 125 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQF--HIVFFGILKLGAVHVPVSPLFREHELSYE---------- 125 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHH--HHHHHHHHHhCeEEeecCCCCCHHHHHHH----------
Confidence 589998888777766543 677889988888876644 3358888999998887765433 444333
Q ss_pred ccccccceeccccHHHHHHH
Q 013869 265 RAGEAITAFTGVPTMYTRLI 284 (435)
Q Consensus 265 i~~~~~t~~~~~P~~~~~l~ 284 (435)
+.+.++..++..+..+..+.
T Consensus 126 l~~~~~~~ii~~~~~~~~l~ 145 (567)
T PRK06178 126 LNDAGAEVLLALDQLAPVVE 145 (567)
T ss_pred HHhcCCcEEEEccchHHHHH
Confidence 55578888888777665543
No 253
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=37.17 E-value=3.2e+02 Score=28.07 Aligned_cols=94 Identities=20% Similarity=0.188 Sum_probs=61.7
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcC
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~ 244 (435)
.++.+|++. .+..+| ..-.+|++.+...+..++.. .++.++|++..++|-.--. +..+++++..|+..+...
T Consensus 66 ~p~~~A~~~-~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~~ 140 (629)
T PRK10524 66 RPEQLALIA-VSTETD--EERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA--AFAMLACARIGAIHSVVF 140 (629)
T ss_pred CCCCeEEEE-EcCCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeC
Confidence 456677654 222222 23468999988877776654 4788999999998875544 346889999999887775
Q ss_pred C-cchhHHHHHHHhhcCCCCCccccccceeccc
Q 013869 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (435)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 276 (435)
+ +....+... +...++..++..
T Consensus 141 ~~~~~~~l~~~----------l~~~~~~~li~~ 163 (629)
T PRK10524 141 GGFASHSLAAR----------IDDAKPVLIVSA 163 (629)
T ss_pred CCCCHHHHHHH----------HHhcCCcEEEEc
Confidence 4 555555555 344566666554
No 254
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=37.14 E-value=1.9e+02 Score=28.99 Aligned_cols=82 Identities=12% Similarity=-0.079 Sum_probs=55.4
Q ss_pred EEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCC
Q 013869 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGN 264 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (435)
..+|+..+...+..+...+ ++..++++..++|-..-.- ..+++++..|+..+..++..+.+.+..+
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~--------- 106 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHL--EAWYGIMGIGAICHTVNPRLFPEQIAWI--------- 106 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH--HHHHHHHhcCeEeeccccccCHHHHHHH---------
Confidence 4679999888777776654 7888999988877755443 3588889999999888664443333333
Q ss_pred ccccccceeccccHHH
Q 013869 265 RAGEAITAFTGVPTMY 280 (435)
Q Consensus 265 i~~~~~t~~~~~P~~~ 280 (435)
++..++..++......
T Consensus 107 l~~~~~~~i~~~~~~~ 122 (542)
T PRK06018 107 INHAEDRVVITDLTFV 122 (542)
T ss_pred HhccCCCEEEEccccH
Confidence 4445666666555433
No 255
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=37.06 E-value=1.6e+02 Score=28.14 Aligned_cols=60 Identities=10% Similarity=-0.051 Sum_probs=45.3
Q ss_pred CeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 69 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
..-.+....+-.-..+.++|..+|..++.+-|...+......++..++++++++..+.+.
T Consensus 94 ~~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~~a 153 (376)
T TIGR01747 94 QATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYDDT 153 (376)
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHH
Confidence 444566666777888888889999888776665555666778889999999999765554
No 256
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=36.77 E-value=1.9e+02 Score=22.00 Aligned_cols=42 Identities=12% Similarity=0.136 Sum_probs=34.3
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech
Q 013869 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
.+....+-..|..++.+.+..+.+++...+.+.++++|..+.
T Consensus 17 ~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 17 NIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 333344445799999999999999999999999999998875
No 257
>PLN00011 cysteine synthase
Probab=36.72 E-value=2.5e+02 Score=26.07 Aligned_cols=60 Identities=10% Similarity=-0.094 Sum_probs=45.6
Q ss_pred cCCCC-CeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechh
Q 013869 64 AGGCG-ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (435)
Q Consensus 64 g~~~g-~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (435)
.+.+| +.|. ....+-.-..+.++|..+|..+..+-|...+......++..++++++++++
T Consensus 64 ~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 64 LITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred CCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 35677 4554 466677788888889999998877766555566778899999999999864
No 258
>PLN02479 acetate-CoA ligase
Probab=36.59 E-value=2.3e+02 Score=28.60 Aligned_cols=95 Identities=13% Similarity=0.026 Sum_probs=64.6
Q ss_pred CCCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
..++.++++. +. ..+|...+...+..++..+ ++.++|++..+.|-.-.. +..+++++..|+..+..
T Consensus 32 ~~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~--~~~~la~~~~G~v~v~l 100 (567)
T PLN02479 32 VHPTRKSVVH---GS------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAM--YEAHFGVPMAGAVVNCV 100 (567)
T ss_pred hCCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHH--HHHHHHHHhCCcEEEEe
Confidence 3556666653 11 2578998888877776655 788999999888875433 33588899999998888
Q ss_pred CCcchhHHHHHHHhhcCCCCCccccccceeccccHHHH
Q 013869 244 PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYT 281 (435)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 281 (435)
+...+...+..+ +++.+++.++..+..+.
T Consensus 101 ~~~~~~~~l~~~---------l~~~~~~~ii~~~~~~~ 129 (567)
T PLN02479 101 NIRLNAPTIAFL---------LEHSKSEVVMVDQEFFT 129 (567)
T ss_pred ccccCHHHHHHH---------HhhcCceEEEEchhhhh
Confidence 764443333333 55678888887766544
No 259
>PRK10717 cysteine synthase A; Provisional
Probab=36.52 E-value=2.6e+02 Score=26.05 Aligned_cols=59 Identities=14% Similarity=-0.007 Sum_probs=45.1
Q ss_pred CCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechh
Q 013869 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (435)
Q Consensus 65 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (435)
+++|+.|. ....+-.-..+.++|..+|..+..+-|...+......++..++++++++..
T Consensus 61 ~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 61 LKPGGTIV-EGTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred CCCCCEEE-EeCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 35666654 366677778888888899988877766555566788999999999999864
No 260
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=36.38 E-value=3.7e+02 Score=25.60 Aligned_cols=58 Identities=14% Similarity=0.083 Sum_probs=44.0
Q ss_pred EEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHH
Q 013869 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (435)
Q Consensus 72 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (435)
.+....+-....+.++|...|..+..+-|...+......++..+++++++..++.+..
T Consensus 51 vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~a~ 108 (380)
T TIGR01127 51 VVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVILHGDDYDEAY 108 (380)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHHHHHCCCEEEEECCCHHHHH
Confidence 3445556777778888999998887776766666678889999999999987554443
No 261
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=36.20 E-value=4e+02 Score=26.58 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=64.8
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH--HHH
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFV 82 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~--~~~ 82 (435)
.++.+|++. ++..+|.+.+...+...... .+++.+|++....+-.- .++
T Consensus 193 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~--------------------~~~~~~d~~l~~~pl~h~~g~~ 252 (538)
T TIGR03208 193 SPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAER--------------------LELGGGDVILMASPMAHQTGFM 252 (538)
T ss_pred CCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhh--------------------cCCCCCCeEEEeCCchhHHHHH
Confidence 456667653 12357777776554444332 36677898888877653 244
Q ss_pred HHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHH
Q 013869 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (435)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (435)
...+..+..|...+.. +...+..+...+++.++.++...+.....+.
T Consensus 253 ~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 299 (538)
T TIGR03208 253 YGLMMPLILNATAVLQ-DIWNPARAAELIRETGVTFTMASTPFLTDLC 299 (538)
T ss_pred HHHHHHHHcCCEEEec-CccCHHHHHHHHHHhCCeEEecCHHHHHHHH
Confidence 4566777788877644 4567888899999999999998887766543
No 262
>TIGR00260 thrC threonine synthase. Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model.
Probab=35.93 E-value=3.6e+02 Score=25.01 Aligned_cols=58 Identities=12% Similarity=-0.053 Sum_probs=40.5
Q ss_pred EEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCC-CHHHHHHHHhcCCccEEEechhhHHH
Q 013869 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSY-PESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 71 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
..+....+-.-..+.++|...|..++.+-|.. ...+....++..+++++.++.++.+.
T Consensus 73 ~vv~aSsGN~g~a~A~~a~~~g~~~~v~~p~~~~s~~k~~~~~~~GA~Vi~~~~~~~~~ 131 (328)
T TIGR00260 73 TVLCASTGNTGAAAAAYAGKAGVKVVILYPAGKISLGKLAQALGYNAEVVAIDGNFDDA 131 (328)
T ss_pred EEEEeCCcHHHHHHHHHhccCCCcEEEEECCCCCCHHHHHHHHhcCcEEEEecCCHHHH
Confidence 44445555666666688888998887776654 33445666778999999998765543
No 263
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=35.91 E-value=31 Score=21.46 Aligned_cols=26 Identities=23% Similarity=0.280 Sum_probs=22.0
Q ss_pred EEEEecCCCCCHHHHHHHHHHhCCcc
Q 013869 306 RLMMCGSSALPLPVMQQWETITGHRL 331 (435)
Q Consensus 306 r~i~~~G~~l~~~l~~~~~~~~~~~l 331 (435)
+++-++|.|++.+....++..|+-++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 57889999999999999988876554
No 264
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=35.72 E-value=1.1e+02 Score=25.72 Aligned_cols=51 Identities=8% Similarity=-0.067 Sum_probs=35.8
Q ss_pred CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCC
Q 013869 24 QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGC 93 (435)
Q Consensus 24 ~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 93 (435)
+.-+||.|+.+.+.++|..+.+. +...+.+.+...++-..++..+|- .+|.
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~------------------~~~~~~viV~i~~gg~~~A~~La~-~l~~ 64 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD------------------LADENPLVLCVMGGGLVFTGQLLP-RLDF 64 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH------------------cCCCCeEEEEECCCcHHHHHHHHH-HcCC
Confidence 45689999999999999999883 222234556667776666666664 3353
No 265
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=35.71 E-value=3.1e+02 Score=27.35 Aligned_cols=95 Identities=9% Similarity=-0.058 Sum_probs=60.2
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCC-CCCeEEEEeCCCH-HHH
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGG-CGARIGIVAKPSF-EFV 82 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~-~g~~V~i~~~~~~-~~~ 82 (435)
.|+.+|++. ++..+|++.+...+..+...+ ++. ++|++....|-.- -.+
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~--------------------~~~~~~d~~l~~~pl~h~~g~ 209 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV--------------------GLDAATDVGCSWLPLYHDMGL 209 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh--------------------CCCCCCCeEEEcCCCccCccH
Confidence 345666663 234689988877766555433 556 7888887776552 223
Q ss_pred HHHHHHHHhCCeEEeCCC-CC--CHHHHHHHHhcCCccEEEechhhHHH
Q 013869 83 AGVLGTWFSGCIAVPLAL-SY--PESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~-~~--~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
..+++++..|+..+..+. .. .+..+...+++.++.++.+.+.....
T Consensus 210 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~ 258 (525)
T PRK05851 210 AFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNL 258 (525)
T ss_pred HHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHH
Confidence 356777888988877643 12 35567788889998877554443333
No 266
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=34.63 E-value=3.1e+02 Score=27.61 Aligned_cols=95 Identities=18% Similarity=0.162 Sum_probs=63.5
Q ss_pred CcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc----cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc-CC
Q 013869 171 DPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM-PK 245 (435)
Q Consensus 171 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~----~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~-~~ 245 (435)
+-..+++-+-.++. -.+|++.+...+..+++.+ +. .+|++..++|..--. ...++++...|+....+ +.
T Consensus 25 ~~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~--~~a~LA~~riGAI~~~vf~~ 98 (528)
T COG0365 25 DDTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA--VIALLATARIGAIPAVVSPG 98 (528)
T ss_pred CceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH--HHHHHHHHHcCCEEeecccC
Confidence 33444554443333 6889999988888877765 35 899999999996554 34688888888766554 56
Q ss_pred cchhHHHHHHHhhcCCCCCccccccceeccccHHHH
Q 013869 246 FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYT 281 (435)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 281 (435)
|.++.+...+.+ -++..++.....++
T Consensus 99 f~~~al~~Ri~d----------~~~k~vit~d~~~~ 124 (528)
T COG0365 99 LSAEAVADRIAD----------LGPKVLIADDGTFR 124 (528)
T ss_pred CCHHHHHHHHHc----------cCCCEEEEeccccc
Confidence 888887777544 45555554444333
No 267
>PRK02991 D-serine dehydratase; Provisional
Probab=34.63 E-value=2e+02 Score=28.16 Aligned_cols=60 Identities=8% Similarity=-0.083 Sum_probs=44.5
Q ss_pred EEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 72 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
.+....+-.-..+.+++..+|..+..+-|...+......++..++++++++.++.+....
T Consensus 160 VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~~~~a~~~ 219 (441)
T PRK02991 160 IAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGDYGVAVEE 219 (441)
T ss_pred EEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHHHHH
Confidence 444555677777888888999888766665556666777999999999999876655433
No 268
>PRK12483 threonine dehydratase; Reviewed
Probab=34.61 E-value=4.8e+02 Score=26.31 Aligned_cols=59 Identities=17% Similarity=0.080 Sum_probs=44.9
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
+.+..+-....+.++|..+|..+..+-|...+......++..+++++++...+.+....
T Consensus 89 V~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~~d~a~~~ 147 (521)
T PRK12483 89 ITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFPDALAH 147 (521)
T ss_pred EEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHH
Confidence 44555677777888999999988877676666666788999999999998766554433
No 269
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=34.57 E-value=1.1e+02 Score=24.31 Aligned_cols=34 Identities=12% Similarity=-0.003 Sum_probs=26.9
Q ss_pred ccCCCCCeEEEEeCC---CHHHHHHHHHHHHhCCeEE
Q 013869 63 LAGGCGARIGIVAKP---SFEFVAGVLGTWFSGCIAV 96 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~---~~~~~~~~lA~~~~G~~~v 96 (435)
+|+.+++.|.+++.. +.....+++++..+|..-|
T Consensus 90 ~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 90 KGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred cCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 599999999999875 5677777888888886543
No 270
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=34.43 E-value=2.3e+02 Score=27.41 Aligned_cols=67 Identities=15% Similarity=0.094 Sum_probs=52.7
Q ss_pred CCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeC--CCCCCHHHHHHHHhcCCccEEEec----hhhHHHHHHH
Q 013869 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPL--ALSYPESELLHVMHDSDISMVLST----EDYREVLQNV 132 (435)
Q Consensus 66 ~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~vi~~----~~~~~~~~~~ 132 (435)
=+|-+|+++..=.++..+.+..+...|+-+..- ||..+.++....|.+.+..+.-.. ++++..+...
T Consensus 30 l~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~~~ey~~~~~~~ 102 (406)
T TIGR00936 30 LKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGETNEEYYWAIEQV 102 (406)
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCCHHHHHHHHHHH
Confidence 349999999999999999999999999987655 777788889899998898877543 4444444444
No 271
>PF02073 Peptidase_M29: Thermophilic metalloprotease (M29); InterPro: IPR000787 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M29 (aminopeptidase T family, clan M-). The protein fold of the peptidase domain and the active site residues are not known for any members of the thermophilic metallo-aminopeptidases family.; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 2AYI_D 1ZJC_A.
Probab=34.32 E-value=1.4e+02 Score=28.87 Aligned_cols=53 Identities=19% Similarity=0.053 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHHHHHHHHHHHhCCeEEeCC
Q 013869 32 LASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLA 99 (435)
Q Consensus 32 l~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 99 (435)
+..+.+++|..|.+.+ .+|++|+.|.|-.+.. +..-.+.-++..+|+..+.+.
T Consensus 3 ~~~~l~kyA~llV~~g---------------lnvq~Gq~v~I~~~~~~~~l~r~l~~~ay~aGA~~v~v~ 57 (398)
T PF02073_consen 3 FDERLEKYAELLVKYG---------------LNVQPGQKVLIRAPVEAAPLARALVEEAYEAGAKYVIVN 57 (398)
T ss_dssp HHHHHHHHHHHHHHTT---------------T---TT-EEEEEEETT-HHHHHHHHHHHHHTT-SCEEEE
T ss_pred chHHHHHHHHHHHHhc---------------cCCCCCCEEEEEecccHHHHHHHHHHHHHHcCCCceEEE
Confidence 4677899999999875 4889999999998877 333445556777888444343
No 272
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=34.28 E-value=57 Score=22.39 Aligned_cols=33 Identities=12% Similarity=0.036 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEE
Q 013869 34 SSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIV 74 (435)
Q Consensus 34 ~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~ 74 (435)
+...++++.|++.|+.. -...+|+++||.|-|.
T Consensus 31 e~~~~f~~~L~~~Gv~~--------~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 31 ENLRRFARKLKKLGVED--------ALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHHHHHHCCHHH--------HHHHcCCCCCCEEEEc
Confidence 33556666666655411 0112699999999875
No 273
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=34.06 E-value=63 Score=27.44 Aligned_cols=35 Identities=6% Similarity=0.026 Sum_probs=28.6
Q ss_pred cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeC
Q 013869 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~ 76 (435)
.-+||.++++.++++|..+++. |.+|.-.|+|.-.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s-----------------~~~PDvIiaiaRG 39 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRAS-----------------GFKPDVIVAIARG 39 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHc-----------------CCCCCEEEEEcCC
Confidence 3589999999999999999984 7777777776533
No 274
>PRK08197 threonine synthase; Validated
Probab=33.55 E-value=3.5e+02 Score=26.01 Aligned_cols=57 Identities=7% Similarity=-0.225 Sum_probs=40.4
Q ss_pred EEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHH
Q 013869 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (435)
Q Consensus 71 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (435)
..+....+-.-..+.+++...|..+..+-|...+......++..+++++.++.++.+
T Consensus 129 ~vv~aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~Vi~v~~~~~~ 185 (394)
T PRK08197 129 HLAMPTNGNAGAAWAAYAARAGIRATIFMPADAPEITRLECALAGAELYLVDGLISD 185 (394)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 344455566677777777888987766655444455678899999999999876543
No 275
>PRK08638 threonine dehydratase; Validated
Probab=33.16 E-value=2.8e+02 Score=25.97 Aligned_cols=58 Identities=7% Similarity=0.027 Sum_probs=44.1
Q ss_pred EEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHH
Q 013869 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (435)
Q Consensus 72 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (435)
.+....+-.-..+.++|...|..+..+-|...+......++..++++++++.++.+..
T Consensus 78 vv~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~ 135 (333)
T PRK08638 78 VVACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFNDTI 135 (333)
T ss_pred EEEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHHHHH
Confidence 4445557778888889999998887776655556667789999999999987655443
No 276
>PRK06721 threonine synthase; Reviewed
Probab=33.09 E-value=2.9e+02 Score=26.12 Aligned_cols=58 Identities=7% Similarity=-0.085 Sum_probs=40.9
Q ss_pred EEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCC-CHHHHHHHHhcCCccEEEechhhHHH
Q 013869 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSY-PESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 71 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
..+....+-.-..+..+|...|..++.+-|.. .+......++..++++++++.++...
T Consensus 77 ~vV~aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 135 (352)
T PRK06721 77 AIICASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGNFDDA 135 (352)
T ss_pred EEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 33444556666777788889998877776643 24445667899999999998765543
No 277
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=32.71 E-value=2.2e+02 Score=28.08 Aligned_cols=79 Identities=8% Similarity=-0.092 Sum_probs=52.8
Q ss_pred EEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCCCC
Q 013869 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGN 264 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (435)
..+|+..+...+..++..+ ++..++++....+.....- ..+++++..|+.++..+...+.+.+..+
T Consensus 24 ~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~--------- 92 (502)
T TIGR01734 24 QELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHML--VAFLGSIKSGHAYIPVDTSIPSERIEMI--------- 92 (502)
T ss_pred cEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHH--HHHHHHHHhCCEEeCCCCcChHHHHHHH---------
Confidence 3689999988887776654 5678888887777754443 3588999999998887765444433333
Q ss_pred ccccccceecccc
Q 013869 265 RAGEAITAFTGVP 277 (435)
Q Consensus 265 i~~~~~t~~~~~P 277 (435)
+++.+++.++...
T Consensus 93 ~~~~~~~~ii~~~ 105 (502)
T TIGR01734 93 IEAAGPELVIHTA 105 (502)
T ss_pred HHhcCCCEEEecc
Confidence 3334555555443
No 278
>PRK06110 hypothetical protein; Provisional
Probab=32.58 E-value=3.8e+02 Score=24.85 Aligned_cols=59 Identities=14% Similarity=0.015 Sum_probs=42.2
Q ss_pred EEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHH
Q 013869 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (435)
Q Consensus 72 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (435)
.+....+-.-..+.++|...|..+..+-|...+......++..+++++.++.++.+...
T Consensus 73 vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~ 131 (322)
T PRK06110 73 VISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEKNAAMRALGAELIEHGEDFQAARE 131 (322)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHHHH
Confidence 44456677788888899999987766644433344568899999999999876554433
No 279
>PLN02550 threonine dehydratase
Probab=32.55 E-value=5.7e+02 Score=26.26 Aligned_cols=55 Identities=16% Similarity=0.091 Sum_probs=41.8
Q ss_pred eCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHH
Q 013869 75 AKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (435)
Q Consensus 75 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (435)
...+-....+.++|..+|..+..+-|...+......++..+++++++...+.+..
T Consensus 163 aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~~r~~GAeVvl~g~~~dea~ 217 (591)
T PLN02550 163 SSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDSYDEAQ 217 (591)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHHHHH
Confidence 4556667777788999998887776666666667788999999999987655443
No 280
>PRK07867 acyl-CoA synthetase; Validated
Probab=32.49 E-value=5.2e+02 Score=25.81 Aligned_cols=95 Identities=9% Similarity=0.014 Sum_probs=59.2
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHH--HH
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FV 82 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~--~~ 82 (435)
.++.++++. ++..+|++.+...+..+... +++.++|++....+-.-. .+
T Consensus 150 ~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~--------------------~~~~~~d~~l~~~pl~~~~~~~ 209 (529)
T PRK07867 150 DPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQR--------------------FGLGPDDVCYVSMPLFHSNAVM 209 (529)
T ss_pred CccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHh--------------------hCCCcccEEEEecchhHHHHHH
Confidence 456666663 13467888876555544332 367778888776654322 22
Q ss_pred HHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHH
Q 013869 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (435)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (435)
..+++.+..|...+. .+....+.+...+++.++.++...+.....+
T Consensus 210 ~~~~~~l~~G~~~~~-~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 255 (529)
T PRK07867 210 AGWAVALAAGASIAL-RRKFSASGFLPDVRRYGATYANYVGKPLSYV 255 (529)
T ss_pred HHHHHHHhcCceEEe-cCCCCHHHHHHHHHHhCCeEEeccHHHHHHH
Confidence 233445556766554 4566788888899999999988776655443
No 281
>PRK05973 replicative DNA helicase; Provisional
Probab=32.36 E-value=1.4e+02 Score=26.41 Aligned_cols=52 Identities=19% Similarity=0.184 Sum_probs=39.1
Q ss_pred cCCCCCeEEEEeCCC--HHHHHHHHH--HHHhCCeEEeCCCCCCHHHHHHHHhcCC
Q 013869 64 AGGCGARIGIVAKPS--FEFVAGVLG--TWFSGCIAVPLALSYPESELLHVMHDSD 115 (435)
Q Consensus 64 g~~~g~~V~i~~~~~--~~~~~~~lA--~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 115 (435)
|+.+|+.+.|..+++ =..++..|| ....|-.++.+....+++++...+...+
T Consensus 60 Gl~~Gsl~LIaG~PG~GKT~lalqfa~~~a~~Ge~vlyfSlEes~~~i~~R~~s~g 115 (237)
T PRK05973 60 QLKPGDLVLLGARPGHGKTLLGLELAVEAMKSGRTGVFFTLEYTEQDVRDRLRALG 115 (237)
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHHHHcC
Confidence 999999999999988 333334333 3345878888888888988888887775
No 282
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=32.20 E-value=1.5e+02 Score=26.36 Aligned_cols=53 Identities=13% Similarity=0.099 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhhCCCCCccccccccccc---------cccCCCCCeEEEEeCCCHHHHHHHH
Q 013869 34 SSALRISSLLCSNDLKTTSEKTKNENSA---------VLAGGCGARIGIVAKPSFEFVAGVL 86 (435)
Q Consensus 34 ~~~~~la~~L~~~~~~~~~~~~~~~~~~---------~~g~~~g~~V~i~~~~~~~~~~~~l 86 (435)
.++.+++..|++.|......+.-+..+. ...+..-|.|.+.++|.+++..-.+
T Consensus 13 ~~~~~l~~~l~~~G~~~~~~P~i~i~p~~~~~~~~~~l~~l~~~d~iifTS~naV~~~~~~l 74 (255)
T PRK05752 13 EECAALAASLAEAGIFSSSLPLLAIEPLPETPEQRALLLELDRYCAVIVVSKPAARLGLELL 74 (255)
T ss_pred HHHHHHHHHHHHcCCCEEEcCcEEEeeCCCCHHHHHHHhcCCCCCEEEEECHHHHHHHHHHH
Confidence 3567777778887775544322221111 1245667899999999988865544
No 283
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=31.90 E-value=2.4e+02 Score=26.22 Aligned_cols=56 Identities=7% Similarity=-0.073 Sum_probs=42.4
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
+....+-.-..+.++|...|..+..+-|...+......++..++++++++..+...
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 126 (317)
T TIGR02991 71 VAASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRSQDDA 126 (317)
T ss_pred EEECCCHHHHHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCCHHHH
Confidence 34555677778888899999888776665555666788999999999999765443
No 284
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=31.86 E-value=4e+02 Score=27.92 Aligned_cols=88 Identities=5% Similarity=-0.130 Sum_probs=59.2
Q ss_pred ceEEeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHHHhhcCCC
Q 013869 186 KGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVN 262 (435)
Q Consensus 186 K~v~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (435)
....+|++.+...+..++.. .++.++|++..+++-..-. +...++++..|+..+........+-+..+
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~i------- 188 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEW--LASIYGIWSQSMVAATVYANLGEDALAYA------- 188 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEeeCCCCCHHHHHhh-------
Confidence 35688999988888777654 4788999998888875433 34688889999888777553333333332
Q ss_pred CCccccccceeccccHHHHHHH
Q 013869 263 GNRAGEAITAFTGVPTMYTRLI 284 (435)
Q Consensus 263 ~~i~~~~~t~~~~~P~~~~~l~ 284 (435)
+...+++.++.....+..+.
T Consensus 189 --l~~s~~~~lv~~~~~~~~l~ 208 (700)
T PTZ00216 189 --LRETECKAIVCNGKNVPNLL 208 (700)
T ss_pred --hhccCccEEEECHHHHHHHH
Confidence 55567777776665554443
No 285
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=31.53 E-value=2.2e+02 Score=26.82 Aligned_cols=62 Identities=8% Similarity=-0.003 Sum_probs=49.5
Q ss_pred eEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHHHH
Q 013869 70 RIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVA 133 (435)
Q Consensus 70 ~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 133 (435)
.|+-...||-+- +.+||.++|...+.+-|..++.....-.+..++.++++...+.+......
T Consensus 77 ViaaSaGNHaQG--vA~aa~~lGi~a~IvMP~~tp~~Kv~a~r~~GaeVil~g~~~dda~~~a~ 138 (347)
T COG1171 77 VIAASAGNHAQG--VAYAAKRLGIKATIVMPETTPKIKVDATRGYGAEVILHGDNFDDAYAAAE 138 (347)
T ss_pred eEEecCCcHHHH--HHHHHHHhCCCEEEEecCCCcHHHHHHHHhcCCEEEEECCCHHHHHHHHH
Confidence 566666666655 56899999999888888888888888899999999999998876655443
No 286
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.49 E-value=5.9e+02 Score=26.13 Aligned_cols=102 Identities=15% Similarity=0.103 Sum_probs=61.9
Q ss_pred CCCCcEEEEec--CCCCCCCceEEeehHHHHHHHHHHHHhcc--CCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 168 RGEDPALIVYT--SGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 168 ~~~~~~~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
.++.++++... .+..| ....+|++.+...+..++..+. +.++|++...++-+.-. +..+++++..|+.++.+
T Consensus 34 ~~~~~a~~~~~~~~~~~~--~~~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~--~~~~lA~~~~G~v~vpl 109 (631)
T PRK07769 34 RGDKLAYRFLDFSTERDG--VARDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDY--LIAFFGALYAGRIAVPL 109 (631)
T ss_pred CCCCeEEEEeccCCCCCC--ceeEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHH--HHHHHHHHHcCCEEEee
Confidence 45566655432 11122 1346899998887777665442 57889988888776433 34688899999988766
Q ss_pred -CCcc---hhHHHHHHHhhcCCCCCccccccceeccccHHHHHH
Q 013869 244 -PKFS---VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (435)
Q Consensus 244 -~~~~---~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 283 (435)
+... ...+... +...++..++..+.....+
T Consensus 110 ~~~~~~~~~~~l~~~----------l~~~~~~~vi~~~~~~~~~ 143 (631)
T PRK07769 110 FDPAEPGHVGRLHAV----------LDDCTPSAILTTTDSAEGV 143 (631)
T ss_pred CCCCccchHHHHHHH----------HHhCCCCEEEEChHHHHHH
Confidence 2222 1223233 4556777777766654433
No 287
>PRK08246 threonine dehydratase; Provisional
Probab=31.28 E-value=4.2e+02 Score=24.42 Aligned_cols=60 Identities=12% Similarity=0.075 Sum_probs=44.2
Q ss_pred CCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 68 g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
++.| +....+-.-..+.++|...|..+..+-|...+......++..++++++++.++.+.
T Consensus 68 ~~~v-v~aSsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 127 (310)
T PRK08246 68 AAGV-VAASGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEYADA 127 (310)
T ss_pred CCeE-EEeCCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCHHHH
Confidence 4554 44455777788888888999888777665555666778999999999998765443
No 288
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=31.26 E-value=1.3e+02 Score=21.43 Aligned_cols=31 Identities=16% Similarity=0.254 Sum_probs=22.6
Q ss_pred eEEEeCCc------ccCHHHHHH-HHHHHHHHHhhCCC
Q 013869 18 VAIRADQK------SYSYDQLAS-SALRISSLLCSNDL 48 (435)
Q Consensus 18 ~al~~~~~------~~Ty~el~~-~~~~la~~L~~~~~ 48 (435)
+|++++++ +++-.|+.+ |+.+++.+|+++++
T Consensus 16 I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv 53 (86)
T PF09153_consen 16 IAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGV 53 (86)
T ss_dssp EEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT-
T ss_pred EEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCc
Confidence 34555543 566678877 99999999999854
No 289
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.08 E-value=2.6e+02 Score=27.96 Aligned_cols=80 Identities=15% Similarity=0.041 Sum_probs=53.9
Q ss_pred EeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCc-chhHHHHHHHhhcCCCCC
Q 013869 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (435)
.+|+..+...+..+...+ ++..++++..+++-.-.. +..+++++..|+.++..+.. ....+...
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~--~~~~~a~~~~G~~~vpl~~~~~~~~~~~~---------- 109 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF--VESVLAANMLGAIAVPVNFRLTPPEIAFL---------- 109 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEEEcCccCCHHHHHHH----------
Confidence 688998887777765544 678889888777754433 34688999999999887654 44444444
Q ss_pred ccccccceeccccHHH
Q 013869 265 RAGEAITAFTGVPTMY 280 (435)
Q Consensus 265 i~~~~~t~~~~~P~~~ 280 (435)
++..++..++..+...
T Consensus 110 l~~~~~~~ii~~~~~~ 125 (542)
T PRK07786 110 VSDCGAHVVVTEAALA 125 (542)
T ss_pred HHhCCCcEEEEccchH
Confidence 3445666666655444
No 290
>PLN02356 phosphateglycerate kinase
Probab=31.01 E-value=3.2e+02 Score=26.62 Aligned_cols=56 Identities=7% Similarity=-0.076 Sum_probs=42.2
Q ss_pred CCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEec
Q 013869 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLST 122 (435)
Q Consensus 66 ~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 122 (435)
++|..|+ ....+-.-+.+.++|...|..++.+-|...+.+....++..+++++.++
T Consensus 102 ~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~ 157 (423)
T PLN02356 102 FPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVR 157 (423)
T ss_pred CCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 3565544 4455566888888899999888777666555666789999999999985
No 291
>TIGR03714 secA2 accessory Sec system translocase SecA2. Members of this protein family are homologous to SecA and part of the accessory Sec system. This system, including both five core proteins for export and a variable number of proteins for glycosylation, operates in certain Gram-positive pathogens for the maturation and delivery of serine-rich glycoproteins such as the cell surface glycoprotein GspB in Streptococcus gordonii.
Probab=31.00 E-value=2e+02 Score=30.36 Aligned_cols=97 Identities=10% Similarity=-0.046 Sum_probs=64.1
Q ss_pred CCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCC
Q 013869 14 ARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGC 93 (435)
Q Consensus 14 ~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 93 (435)
-|++|..+.+....-|....++...+...+++ -...|.+|.|.....-..=...-.+...|.
T Consensus 388 Pt~kp~~r~d~~d~i~~~~~~K~~ai~~~i~~------------------~~~~~~pvLIft~s~~~se~ls~~L~~~gi 449 (762)
T TIGR03714 388 PTNKPIIRIDYPDKIYATLPEKLMATLEDVKE------------------YHETGQPVLLITGSVEMSEIYSELLLREGI 449 (762)
T ss_pred CCCCCeeeeeCCCeEEECHHHHHHHHHHHHHH------------------HhhCCCCEEEEECcHHHHHHHHHHHHHCCC
Confidence 35666666666667777777788888887776 234577888877755332222333345688
Q ss_pred eEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 94 IAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 94 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
.+..++......+-..+....+...|++..+...+
T Consensus 450 ~~~~L~a~~~~~E~~ii~~ag~~g~VlIATdmAgR 484 (762)
T TIGR03714 450 PHNLLNAQNAAKEAQIIAEAGQKGAVTVATSMAGR 484 (762)
T ss_pred CEEEecCCChHHHHHHHHHcCCCCeEEEEcccccc
Confidence 89999888887776666666666666666665544
No 292
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=30.68 E-value=3e+02 Score=25.02 Aligned_cols=56 Identities=16% Similarity=0.046 Sum_probs=45.1
Q ss_pred CCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechh
Q 013869 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (435)
Q Consensus 68 g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (435)
++.| +....+-....+..+|...|..++.+-|..........++..+++++.+...
T Consensus 56 ~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 56 GRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD 111 (306)
T ss_dssp TSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST
T ss_pred ccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEcccc
Confidence 3455 7777788888888899999999888777666667788899999999988764
No 293
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=30.29 E-value=4.2e+02 Score=24.12 Aligned_cols=58 Identities=16% Similarity=-0.025 Sum_probs=44.6
Q ss_pred CCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech
Q 013869 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 65 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
+.+|+.|+- ...+-.-..+.++|...|..+..+-|...+......++..++++++++.
T Consensus 56 ~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 56 IKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred CCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 366776544 6667777888888889999887776655555667889999999999976
No 294
>PRK07591 threonine synthase; Validated
Probab=29.95 E-value=3.1e+02 Score=26.67 Aligned_cols=56 Identities=11% Similarity=-0.072 Sum_probs=41.9
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
+....+-.-..+..+|.++|..++.+-|...+......++..+++++.++.++.+.
T Consensus 141 v~aSsGN~g~alA~~aa~~Gl~~~I~vP~~~~~~k~~~~~~~GA~Vi~v~g~~d~a 196 (421)
T PRK07591 141 ACASTGNLANSVAAHAARAGLDSCVFIPADLEAGKIVGTLVYGPTLVAVDGNYDDV 196 (421)
T ss_pred EEeCCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 45666777888888888999888766554444455677899999999999865443
No 295
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.70 E-value=2.4e+02 Score=28.42 Aligned_cols=78 Identities=13% Similarity=0.055 Sum_probs=52.3
Q ss_pred EeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcch-hHHHHHHHhhcCCCCC
Q 013869 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV-RGIWQRWRESYPVNGN 264 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 264 (435)
.+|+..+...+..++..+ ++..++++..+++-..-. +..+++++..|+..+..++..+ ..+...
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpi~p~~~~~~l~~~---------- 116 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA--VIGYYGTLLAGGIVVQTNPLYTERELEYQ---------- 116 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHcCeEEeccCcccCHHHHHHH----------
Confidence 588998888777766644 677889988887775544 3458888999988887765433 343333
Q ss_pred ccccccceeccccH
Q 013869 265 RAGEAITAFTGVPT 278 (435)
Q Consensus 265 i~~~~~t~~~~~P~ 278 (435)
++..+++.++..+.
T Consensus 117 l~~~~~~~ii~~~~ 130 (563)
T PRK06710 117 LHDSGAKVILCLDL 130 (563)
T ss_pred HhccCCeEEEEecc
Confidence 34455566555443
No 296
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=29.64 E-value=2.6e+02 Score=27.23 Aligned_cols=66 Identities=17% Similarity=0.030 Sum_probs=47.5
Q ss_pred EEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHH
Q 013869 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRW 255 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~ 255 (435)
..+|++.+...+..++..+ ++.+++++..+.+-....- ..+++++..|+.++..++..+.+.+..+
T Consensus 27 ~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~ 95 (458)
T PRK09029 27 EVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETL--LAYLALLQCGARVLPLNPQLPQPLLEEL 95 (458)
T ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHH--HHHHHHHHcCCEEeecCCCCCHHHHHHH
Confidence 3589999988887776654 6788899888877755442 3588999999999988765444434433
No 297
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=29.54 E-value=1.3e+02 Score=27.38 Aligned_cols=74 Identities=9% Similarity=0.105 Sum_probs=46.5
Q ss_pred ccccEEEEecCCCCC--HHHHHHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCC
Q 013869 302 AKQLRLMMCGSSALP--LPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSD 376 (435)
Q Consensus 302 l~~lr~i~~~G~~l~--~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~ 376 (435)
+.++=+.++|++.-+ .++.+.|++.|+...-+.|-++++-+.+..... ....+.+=..-.|...+.++++|...
T Consensus 68 lr~lgL~lSg~d~e~~~~~lv~~~R~~fps~ae~~~v~sDa~~sl~a~t~-g~~~GiVLiaGTgs~crl~~~DGs~~ 143 (336)
T KOG1794|consen 68 LRSLGLGLSGTDQEDKNRKLVTEFRDKFPSVAENFYVTSDADGSLAAATP-GGEGGIVLIAGTGSNCRLVNPDGSEK 143 (336)
T ss_pred cceeeeecccCCchhHHHHHHHHHHHhccchhheeeeehhHHHHHhhcCC-CCCCcEEEEecCCceeEEECCCCCcc
Confidence 444545555555443 256777888887766779999998655443322 12334455555677788888888774
No 298
>TIGR03528 2_3_DAP_am_ly diaminopropionate ammonia-lyase. Members of this protein family are the homodimeric, pyridoxal phosphate enzyme diaminopropionate ammonia-lyase, which adds water to remove two amino groups, leaving pyruvate.
Probab=29.41 E-value=2.5e+02 Score=27.11 Aligned_cols=58 Identities=9% Similarity=-0.052 Sum_probs=43.3
Q ss_pred EEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 71 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
..+....+-.-..+.++|...|..+..+-|...+......++..++++++++.++...
T Consensus 115 ~vv~aSsGN~g~alA~~aa~~Gi~~~IvvP~~~~~~K~~~ir~~GAeVi~~~~~~~~a 172 (396)
T TIGR03528 115 TFVTATDGNHGRGVAWAANQLGQKSVVYMPKGSAQIRLENIRAEGAECTITDLNYDDA 172 (396)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHhcCCEEEEECCCHHHH
Confidence 4455556677788888889999888776565555566777899999999998765543
No 299
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=29.26 E-value=49 Score=21.65 Aligned_cols=19 Identities=42% Similarity=0.543 Sum_probs=14.1
Q ss_pred CceEEEcCCccEEEecccc
Q 013869 414 GDTGKQDEDGYYIILGRKG 432 (435)
Q Consensus 414 GD~g~~~~dG~l~~~gR~~ 432 (435)
|.+.|.++||.+.+.|+.=
T Consensus 33 ~~i~Y~~~dg~yli~G~l~ 51 (57)
T PF10411_consen 33 GGILYVDEDGRYLIQGQLY 51 (57)
T ss_dssp TEEEEEETTSSEEEES-EE
T ss_pred CeEEEEcCCCCEEEEeEEE
Confidence 6688888888888888653
No 300
>PRK07048 serine/threonine dehydratase; Validated
Probab=29.06 E-value=3.6e+02 Score=25.02 Aligned_cols=54 Identities=9% Similarity=-0.076 Sum_probs=41.9
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhH
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 126 (435)
+....+-....+.++|...|..+..+-|...+......++..++++++++....
T Consensus 76 v~aSsGN~g~alA~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~~~~ 129 (321)
T PRK07048 76 VTFSSGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRYTE 129 (321)
T ss_pred EEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHH
Confidence 445567888888889999998887776655556678889999999999986443
No 301
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=28.84 E-value=5.1e+02 Score=25.60 Aligned_cols=52 Identities=15% Similarity=0.096 Sum_probs=39.7
Q ss_pred CeeEEEeC-CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHH
Q 013869 16 DSVAIRAD-QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (435)
Q Consensus 16 ~~~al~~~-~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~ 85 (435)
+..|+-.. ....+|+++.+.++.++..+.+ .+.++.++.+++++..-=+.-.
T Consensus 374 ~~~alal~g~~~~~y~~iq~la~~i~~~~~~------------------~~~~~~Pliiv~e~D~aK~LGq 426 (475)
T PRK10719 374 DAYALALPGSLPPSYAAIQTLAKALVDGVAR------------------FPNKPHPLIVVAEQDMGKALGQ 426 (475)
T ss_pred CcEEEEcCCCCCCCHHHHHHHHHHHHHHHHh------------------hccCCCCEEEEEcccHHHHHHH
Confidence 45666554 5789999999999999999988 5666778888888875544433
No 302
>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells. PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi,
Probab=28.84 E-value=1.1e+02 Score=21.97 Aligned_cols=50 Identities=12% Similarity=0.128 Sum_probs=34.2
Q ss_pred eeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCC
Q 013869 17 SVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (435)
Q Consensus 17 ~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~ 77 (435)
.+.+..-+.++||.+|.+.++.+.+..++++.... .-=..||.+.|-+.-
T Consensus 10 di~it~~d~~~s~e~L~~~v~~~c~~~~~q~ft~k-----------w~DEEGDp~tiSS~~ 59 (83)
T cd06404 10 DIMITSIDPSISLEELCNEVRDMCRFHNDQPFTLK-----------WIDEEGDPCTISSQM 59 (83)
T ss_pred cEEEEEcCCCcCHHHHHHHHHHHhCCCCCCcEEEE-----------EECCCCCceeecCHH
Confidence 34445567799999999999999999887533110 000458888876543
No 303
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=28.68 E-value=1.9e+02 Score=20.34 Aligned_cols=68 Identities=13% Similarity=0.044 Sum_probs=49.8
Q ss_pred ccCHHHHHHHHHHHH---HHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCC
Q 013869 26 SYSYDQLASSALRIS---SLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSY 102 (435)
Q Consensus 26 ~~Ty~el~~~~~~la---~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 102 (435)
..||+||.+.-+.++ +.|.+. .++..|-|+|+.=++... ..++-++.--
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~-----------------~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~ 60 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKV-----------------DLNDDDELAIFNIEGTSS-----------YYVVFLEEVE 60 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhccc-----------------ccCCCCcEEEEEecCcee-----------EEEEEEeccC
Confidence 578999888776544 455553 778899999997776443 3456677777
Q ss_pred CHHHHHHHHhcCCccEEEe
Q 013869 103 PESELLHVMHDSDISMVLS 121 (435)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~ 121 (435)
+.+++...+++.++++=-.
T Consensus 61 s~eev~~ele~mga~in~d 79 (88)
T COG4009 61 SEEEVERELEDMGAEINRD 79 (88)
T ss_pred CHHHHHHHHHHhCchhccc
Confidence 8999999999988876433
No 304
>PRK08526 threonine dehydratase; Provisional
Probab=28.56 E-value=2.4e+02 Score=27.30 Aligned_cols=59 Identities=14% Similarity=0.026 Sum_probs=43.8
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
+....+-....+.++|..+|..+..+-|...+......++..+++++++..++.+....
T Consensus 72 V~aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k~~~~r~~GA~Vv~~g~~~~~a~~~ 130 (403)
T PRK08526 72 IAASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGDNYDEAYAF 130 (403)
T ss_pred EEECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHhCCCEEEEECCCHHHHHHH
Confidence 34566677778888899999888777666555555677899999999998766554443
No 305
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase. Flavoprotein pyridine nucleotide cytochrome reductases [] (FPNCR) catalyse the interchange of reducing equivalents between one-electron carriers and the two-electron-carrying nicotinamide dinucleotides. The enzymes include ferredoxin:NADP+reductases (FNR) [], plant and fungal NAD(P)H:nitrate reductases [, ], NADH:cytochrome b5 reductases [], NADPH:P450 reductases [], NADPH:sulphite reductases [], nitric oxide synthases [], phthalate dioxygenase reductase [], and various other flavoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3QFR_B 3FJO_A 3QFC_B 3QE2_B 3QFS_A 3QFT_A 2B5O_B 2QTZ_A 2QTL_A 2BPO_B ....
Probab=28.03 E-value=61 Score=28.17 Aligned_cols=30 Identities=20% Similarity=0.070 Sum_probs=21.5
Q ss_pred cccCCCCCeEEEEeCCCHHHHHHHHHHHHh
Q 013869 62 VLAGGCGARIGIVAKPSFEFVAGVLGTWFS 91 (435)
Q Consensus 62 ~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 91 (435)
...+++||.|+|+-+|..+.+-.++..+.+
T Consensus 39 ~l~Y~pGD~l~V~P~N~~~~V~~~l~~lgl 68 (219)
T PF00667_consen 39 GLSYQPGDHLGVYPPNDPEEVERLLKRLGL 68 (219)
T ss_dssp TG---TT-EEEEE-SSEHHHHHHHHHHHTS
T ss_pred CCcccCCCEEEEEccCCHHHHHHHHHHhCC
Confidence 468899999999999999999888887654
No 306
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.97 E-value=5.2e+02 Score=25.82 Aligned_cols=96 Identities=9% Similarity=-0.049 Sum_probs=60.3
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCC-CeEEEEeCCC--HHH
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG-ARIGIVAKPS--FEF 81 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g-~~V~i~~~~~--~~~ 81 (435)
.++.+|++. ++..+|.+.+...+..+... .++.++ |++...+|-. ..+
T Consensus 150 ~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~--------------------~~~~~~~d~~~~~~p~~~~~g~ 209 (545)
T PRK07768 150 GEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVA--------------------AEFDVETDVMVSWLPLFHDMGM 209 (545)
T ss_pred CCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHh--------------------cCCCCCCceeEEeCCCccchHH
Confidence 346666663 12468888886655444332 255655 7777766644 444
Q ss_pred HHHHHHHHHhCCeEEeCCCC---CCHHHHHHHHhcCCccEEEechhhHHHH
Q 013869 82 VAGVLGTWFSGCIAVPLALS---YPESELLHVMHDSDISMVLSTEDYREVL 129 (435)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (435)
+..+++.+..|+..+.+.+. ..+..+..++++.++.++.+.+.....+
T Consensus 210 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l 260 (545)
T PRK07768 210 VGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALL 260 (545)
T ss_pred HHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHH
Confidence 44566778889888776542 1355667889999999877665554443
No 307
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=27.32 E-value=5.8e+02 Score=26.09 Aligned_cols=100 Identities=9% Similarity=-0.075 Sum_probs=62.1
Q ss_pred CCCeeEEEe---------CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC--HHHH
Q 013869 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (435)
Q Consensus 14 ~p~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~--~~~~ 82 (435)
.|+.+|++. ++..+|++.+...+..+...+.. .-..++++...+|-. ..+.
T Consensus 207 ~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~------------------~~~~~~~~l~~lPl~h~~g~~ 268 (614)
T PRK08180 207 GPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPF------------------LAEEPPVLVDWLPWNHTFGGN 268 (614)
T ss_pred CcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccc------------------cCCCCcEEEEecchHHHhhHH
Confidence 456777764 23468998887776665544321 001356666666533 2234
Q ss_pred HHHHHHHHhCCeEEeCCCCCCH---HHHHHHHhcCCccEEEechhhHHHHHH
Q 013869 83 AGVLGTWFSGCIAVPLALSYPE---SELLHVMHDSDISMVLSTEDYREVLQN 131 (435)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~---~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (435)
..++.++..|..++..+....+ .++...+++.++.+++..+..+..+..
T Consensus 269 ~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~ 320 (614)
T PRK08180 269 HNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVP 320 (614)
T ss_pred HHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHH
Confidence 4566777888888765433333 345667889999999998877766544
No 308
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=27.30 E-value=2.2e+02 Score=27.13 Aligned_cols=55 Identities=9% Similarity=0.045 Sum_probs=32.9
Q ss_pred ccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCC-----CCCHHHHHHHHhcCCccEEEe
Q 013869 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-----SYPESELLHVMHDSDISMVLS 121 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~vi~ 121 (435)
+++++||.|.+-.+..+ ....++...|+.++.++. ....+++...+.. +.++|+.
T Consensus 66 ~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 66 LDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred hCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 35678888877554433 344556677887776643 2456667666644 4555553
No 309
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=27.27 E-value=39 Score=18.25 Aligned_cols=14 Identities=21% Similarity=0.295 Sum_probs=11.0
Q ss_pred cCCccEEEeccccc
Q 013869 420 DEDGYYIILGRKGI 433 (435)
Q Consensus 420 ~~dG~l~~~gR~~d 433 (435)
+++|.|++.++.+.
T Consensus 10 ~~~g~i~VaD~~n~ 23 (28)
T PF01436_consen 10 DSDGNIYVADSGNH 23 (28)
T ss_dssp ETTSEEEEEECCCT
T ss_pred eCCCCEEEEECCCC
Confidence 48899999887654
No 310
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=27.23 E-value=3e+02 Score=27.00 Aligned_cols=65 Identities=9% Similarity=-0.025 Sum_probs=45.6
Q ss_pred EeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcchhHHHHHH
Q 013869 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRW 255 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~ 255 (435)
.+|+.++...+..+...+ +..+++++..+.+-.... ...+++++..|+.++..+...+.+.+..+
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~--~~~~~a~~~~G~~~~~~~~~~~~~~~~~~ 94 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEM--LATFLGAVKAGHAYIPVDVSSPAERIEMI 94 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEecCCCCChHHHHHHH
Confidence 589999888777766544 567789888887755433 34688899999988877765444444443
No 311
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=27.10 E-value=1.3e+02 Score=29.57 Aligned_cols=57 Identities=14% Similarity=0.073 Sum_probs=33.7
Q ss_pred CCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCC-CCCCHHHHHHHHhcCCccEEEech
Q 013869 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLA-LSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 66 ~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~-~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
++||.|++=-|. .......|-...+..+.||++ ..+..+.+...++.-+++++++.+
T Consensus 177 ~pGd~v~vE~Pt-Y~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P 234 (459)
T COG1167 177 DPGDTVLVEDPT-YPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTP 234 (459)
T ss_pred CCCCEEEEcCCC-cHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECC
Confidence 567777765553 333333333333334444443 266677788888877888888876
No 312
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=26.72 E-value=3e+02 Score=21.17 Aligned_cols=40 Identities=10% Similarity=0.061 Sum_probs=34.0
Q ss_pred HHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech
Q 013869 84 GVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 84 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
+...+-..|..++.+.+..+.+++.....+.++++|..+.
T Consensus 19 ~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~ 58 (122)
T cd02071 19 IARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSS 58 (122)
T ss_pred HHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 3334455699999999999999999999999999999885
No 313
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=26.45 E-value=2e+02 Score=27.39 Aligned_cols=55 Identities=13% Similarity=0.125 Sum_probs=32.1
Q ss_pred ccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCC-----CCHHHHHHHHhcCCccEEEe
Q 013869 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVLS 121 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 121 (435)
+++++||.|++-.+. +....-++...|+.++.++.+ ...+.+...+.. +.++|+.
T Consensus 66 l~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 66 LDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred cCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 367889988764443 344455566778777766432 345556555543 4555554
No 314
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=26.39 E-value=5.8e+02 Score=25.21 Aligned_cols=51 Identities=14% Similarity=0.091 Sum_probs=38.6
Q ss_pred CCeeEEEeCC-cccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHH
Q 013869 15 RDSVAIRADQ-KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVA 83 (435)
Q Consensus 15 p~~~al~~~~-~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~ 83 (435)
-+..|+...+ ...+|+++.+.++.++..+.+ .+.++.++.+++.+..-=++
T Consensus 372 ~~~~Alal~g~~~~~f~~iq~lA~~i~~~~~~------------------~~~~~~Plivv~e~D~aKvL 423 (473)
T PF06277_consen 372 DQPVALALPGKPNPSFAEIQELAEAIAEGMAE------------------LINPDQPLIVVVEQDMAKVL 423 (473)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHh------------------hccCCCCEEEEECchHHHHH
Confidence 3445665544 589999999999999999987 56778888888887754443
No 315
>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription]
Probab=26.31 E-value=1.3e+02 Score=28.41 Aligned_cols=96 Identities=19% Similarity=0.260 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhCCcccccccCccccchhccCCCCCCCCCccceecCCCeEEEecCCCCCCCCccceEEEe-cCCcccccc
Q 013869 317 LPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVK-SPSLFKEYW 395 (435)
Q Consensus 317 ~~l~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~~Gel~v~-~~~~~~gy~ 395 (435)
..+.+.+++..|+++.+.----|.-+.-..........++.++...+..+.+...+ ++-..+ |+-+
T Consensus 112 E~L~qa~RraIGvrikE~reV~EGeV~~l~i~~~~~p~~~y~~~~~~~~i~LkT~d--------~~k~~~lg~~i----- 178 (450)
T COG1224 112 EALTQALRRAIGVRIKETREVYEGEVVELEIRRARNPLNPYGKVPSGAIITLKTKD--------EEKTLRLGPEI----- 178 (450)
T ss_pred HHHHHHHHHhhceEeeeeeEEEEEEEEEEEEeeccCCCCCccccccceEEEEEecc--------cceEeecCHHH-----
Confidence 35678888888888665433333222222222222333445555555544443322 111111 1111
Q ss_pred CCchhcccccccCCccccCceEEEcCC-ccEEEecccc
Q 013869 396 KLPKVTKDSFTADGFFKTGDTGKQDED-GYYIILGRKG 432 (435)
Q Consensus 396 ~~~~~~~~~~~~~g~~~TGD~g~~~~d-G~l~~~gR~~ 432 (435)
. +.++..| ...||+-++|.+ |.++.+||++
T Consensus 179 -----~-~ql~~~~-V~~GDVI~Id~etG~V~klGrs~ 209 (450)
T COG1224 179 -----A-EQLVKEG-VEEGDVIYIDAETGRVKKLGRSK 209 (450)
T ss_pred -----H-HHHHHhC-cccCCEEEEEccccEEEEeeccc
Confidence 1 1122233 678999999987 9999999987
No 316
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.19 E-value=2.9e+02 Score=27.77 Aligned_cols=92 Identities=17% Similarity=0.148 Sum_probs=59.5
Q ss_pred CCCCcEEEEecCCCCCCCceEEeehHHHHHHHHHHHHhc----cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~----~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
.++.++++. . +..+|+..+...+..+...+ ++..++++..+.+-..-. ...+++++..|+..+..
T Consensus 36 ~p~~~a~~~--~-------~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~v~l 104 (560)
T PRK08974 36 YADQPAFIN--M-------GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQY--PIALFGILRAGMIVVNV 104 (560)
T ss_pred CCCCceEEE--C-------CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEecc
Confidence 456666653 1 13678888888777766643 677889888887665332 34688999999999988
Q ss_pred CCcchhHHHHHHHhhcCCCCCccccccceeccccHH
Q 013869 244 PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM 279 (435)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~ 279 (435)
++..+.+.+..+ +.+.+++.+...+..
T Consensus 105 ~~~~~~~~~~~~---------l~~~~~~~ii~~~~~ 131 (560)
T PRK08974 105 NPLYTPRELEHQ---------LNDSGAKAIVIVSNF 131 (560)
T ss_pred CccCCHHHHHHH---------HHhcCceEEEEeccc
Confidence 765443333332 444666666655443
No 317
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=26.17 E-value=1.6e+02 Score=20.79 Aligned_cols=17 Identities=41% Similarity=0.618 Sum_probs=13.9
Q ss_pred ccceecCCCeEEEecCC
Q 013869 356 TVGNPLPGVQVKIAEDE 372 (435)
Q Consensus 356 ~~G~p~~~~~~~i~d~~ 372 (435)
+-|+|.++++|++.+.+
T Consensus 6 C~~~P~~~~~V~L~e~d 22 (80)
T PF01060_consen 6 CGGKPAKNVKVKLWEDD 22 (80)
T ss_pred eCCccCCCCEEEEEECC
Confidence 34788999999999876
No 318
>PRK08198 threonine dehydratase; Provisional
Probab=25.94 E-value=4.8e+02 Score=25.16 Aligned_cols=57 Identities=14% Similarity=0.067 Sum_probs=42.9
Q ss_pred EeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHH
Q 013869 74 VAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (435)
Q Consensus 74 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (435)
....+-....+.++|...|..+..+-|...+......++..+++++++..++.+...
T Consensus 75 ~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vi~~~~~~~~~~~ 131 (404)
T PRK08198 75 AASAGNHAQGVAYAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHGDVYDEALA 131 (404)
T ss_pred EECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHHHH
Confidence 344567777777899999998877766666666677889999999999866554433
No 319
>KOG3460 consensus Small nuclear ribonucleoprotein (snRNP) LSM3 [RNA processing and modification]
Probab=25.85 E-value=53 Score=23.12 Aligned_cols=40 Identities=15% Similarity=0.283 Sum_probs=30.0
Q ss_pred eEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC
Q 013869 18 VAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (435)
Q Consensus 18 ~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~ 78 (435)
..-..+...-||.++...+++-...|- -+||.|.+++|+.
T Consensus 49 tit~~e~~E~~~e~~~k~~~r~~emlF---------------------vRGd~Vilvspp~ 88 (91)
T KOG3460|consen 49 TITTVEIDEDTYEEIVKTTKRTVEMLF---------------------VRGDGVILVSPPL 88 (91)
T ss_pred eEEEeeccchhHHHHHhhhhcceeEEE---------------------EeCCeEEEEcCcc
Confidence 444456778899999988887665444 4599999999875
No 320
>PRK09224 threonine dehydratase; Reviewed
Probab=25.66 E-value=6.9e+02 Score=25.06 Aligned_cols=57 Identities=16% Similarity=0.052 Sum_probs=43.5
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHH
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (435)
+.+..+-....+.++|..+|..++.+-|...+......++..+++++++..++.+..
T Consensus 72 V~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~~~r~~GA~Vi~~g~~~~~a~ 128 (504)
T PRK09224 72 ITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDAVRAFGGEVVLHGDSFDEAY 128 (504)
T ss_pred EEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHHH
Confidence 445567777788889999998887776666666666788999999999987655443
No 321
>PRK06815 hypothetical protein; Provisional
Probab=25.05 E-value=3.2e+02 Score=25.30 Aligned_cols=56 Identities=14% Similarity=0.016 Sum_probs=41.5
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
+....+-.-....++|...|..+..+-|..........++..+++++.++.++...
T Consensus 72 v~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 127 (317)
T PRK06815 72 ITASSGNHGQGVALAAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGGDALNA 127 (317)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHH
Confidence 34556677777888888999887666554444556778899999999999865443
No 322
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=24.83 E-value=3e+02 Score=27.57 Aligned_cols=56 Identities=11% Similarity=0.028 Sum_probs=42.6
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
+....+-....+.++|..+|..++.+-|...+......++..+++++++...+.+.
T Consensus 69 V~aSaGNha~~vA~aa~~~Gi~~~IvmP~~tp~~Kv~~~r~~GA~Vvl~g~~~d~a 124 (499)
T TIGR01124 69 IAASAGNHAQGVAFSAARLGLKALIVMPETTPDIKVDAVRGFGGEVVLHGANFDDA 124 (499)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEeCcCHHHH
Confidence 33456677777788899999888777676666666778999999999998765443
No 323
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=24.59 E-value=6.7e+02 Score=24.52 Aligned_cols=57 Identities=12% Similarity=0.022 Sum_probs=43.8
Q ss_pred CCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech
Q 013869 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 66 ~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
.+|+.|. ....+-.-..+.++|...|..+..+-|...+.+....++..++++++++.
T Consensus 60 ~~g~~vv-~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 60 KPGDTII-EPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred CCCCEEE-EeCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 5676654 45667788888889999999887776654555567788999999999975
No 324
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=24.49 E-value=1.5e+02 Score=26.89 Aligned_cols=53 Identities=8% Similarity=-0.013 Sum_probs=40.4
Q ss_pred ccCHHHHHHH-----HHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeE
Q 013869 26 SYSYDQLASS-----ALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIA 95 (435)
Q Consensus 26 ~~Ty~el~~~-----~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 95 (435)
.+.|.++... ...+...|.+ .|+.+++.|.+++.++.....+++++-.+|..-
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~-----------------~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~~ 258 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFG-----------------RGVSFDRPIIASCGSGVTAAVVVLALATLDVPN 258 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHh-----------------cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCC
Confidence 5666666531 3455555665 488999999999999999999999998889753
No 325
>PRK08206 diaminopropionate ammonia-lyase; Provisional
Probab=24.46 E-value=3.5e+02 Score=26.15 Aligned_cols=59 Identities=10% Similarity=0.003 Sum_probs=43.1
Q ss_pred EEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHHHH
Q 013869 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (435)
Q Consensus 72 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (435)
.+....+-.-..+.++|...|..+..+-|...+......++..+++++.+..++.+...
T Consensus 119 vv~aSsGN~g~alA~~a~~~G~~~~Ivvp~~~~~~k~~~i~~~GA~Vi~v~~~~~~~~~ 177 (399)
T PRK08206 119 FATATDGNHGRGVAWAAQQLGQKAVIYMPKGSSEERVDAIRALGAECIITDGNYDDSVR 177 (399)
T ss_pred EEEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHHHHHH
Confidence 44566667778888888899988877655544455566789999999999876555433
No 326
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=24.45 E-value=5.1e+02 Score=23.09 Aligned_cols=62 Identities=15% Similarity=0.046 Sum_probs=41.0
Q ss_pred cCCCCCeEEEEeCCCHHHHHHHHHHHHh------C--CeEEeCCCCC---CHHHHHHHHhcCCccEEEechhh
Q 013869 64 AGGCGARIGIVAKPSFEFVAGVLGTWFS------G--CIAVPLALSY---PESELLHVMHDSDISMVLSTEDY 125 (435)
Q Consensus 64 g~~~g~~V~i~~~~~~~~~~~~lA~~~~------G--~~~v~l~~~~---~~~~l~~~l~~~~~~~vi~~~~~ 125 (435)
-+.+|++|++...-+.+.++.+..+... + ..++.++... ..+.+..+.++.+..+.+.+.+.
T Consensus 25 li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v~~~~~ 97 (258)
T PRK10696 25 MIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHIEEQDT 97 (258)
T ss_pred CCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEEEEecc
Confidence 4578999999999999998776666442 2 3445555533 33444566677777777666443
No 327
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=24.11 E-value=2.9e+02 Score=26.44 Aligned_cols=71 Identities=20% Similarity=0.293 Sum_probs=48.8
Q ss_pred ccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCC-----CCCHHHHHHHHhcCCccEEEech-----hhHHHHHHH
Q 013869 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-----SYPESELLHVMHDSDISMVLSTE-----DYREVLQNV 132 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~vi~~~-----~~~~~~~~~ 132 (435)
+++++||-|.+ ++..|+...=++...|+.+|.++- +++++.++..+... .++|+.-. ...+.+.++
T Consensus 69 l~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~~~dm~~i~~l 144 (374)
T COG0399 69 LAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQPCDMDAIMAL 144 (374)
T ss_pred cCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccCCCCHHHHHHH
Confidence 38999995543 467789999999999999988753 56788888777664 55555532 334455555
Q ss_pred HhccC
Q 013869 133 ASKSG 137 (435)
Q Consensus 133 ~~~~~ 137 (435)
.++..
T Consensus 145 a~~~~ 149 (374)
T COG0399 145 AKRHG 149 (374)
T ss_pred HHHcC
Confidence 55543
No 328
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=24.03 E-value=4.4e+02 Score=26.01 Aligned_cols=48 Identities=13% Similarity=0.066 Sum_probs=31.2
Q ss_pred ccCCCCCeEEEEeCCCHHHHHHHHH-HHHhCCeEEeC--------------CCCCCHHHHHHHHhcCC
Q 013869 63 LAGGCGARIGIVAKPSFEFVAGVLG-TWFSGCIAVPL--------------ALSYPESELLHVMHDSD 115 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~~~~~~~lA-~~~~G~~~v~l--------------~~~~~~~~l~~~l~~~~ 115 (435)
+++++||.| + +..++...-| +...|++++-+ ..++..+.+...++...
T Consensus 112 l~v~pGd~V----p-~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 112 IAIKPGQYV----P-GNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred hCCCCcCEE----C-CccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 588999965 3 3333444444 67788877633 44677888888887543
No 329
>PRK07334 threonine dehydratase; Provisional
Probab=24.01 E-value=3.1e+02 Score=26.45 Aligned_cols=56 Identities=13% Similarity=0.011 Sum_probs=42.0
Q ss_pred EEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 73 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
+....+-.-..+.++|...|..+..+-|...+......++..++++++++.++...
T Consensus 75 v~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~ 130 (403)
T PRK07334 75 IAMSAGNHAQGVAYHAQRLGIPATIVMPRFTPTVKVERTRGFGAEVVLHGETLDEA 130 (403)
T ss_pred EEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECcCHHHH
Confidence 44556677788888999999888777665444555678999999999998655443
No 330
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=23.85 E-value=1.9e+02 Score=30.32 Aligned_cols=62 Identities=8% Similarity=0.226 Sum_probs=43.6
Q ss_pred cCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCC---------C-----HHHHHHHHhcC-Ccc----EEEechh
Q 013869 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSY---------P-----ESELLHVMHDS-DIS----MVLSTED 124 (435)
Q Consensus 64 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~vi~~~~ 124 (435)
-+++||.|. +-+|+=..+.. |+..+|+.+|.+.|.. + ++.+...+++. +++ ++++.+.
T Consensus 231 ~~~~Gd~VL-vdRN~HKSv~h--aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT 307 (714)
T PRK15400 231 SAPAGSTVL-IDRNCHKSLTH--LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST 307 (714)
T ss_pred hcCCCCEEE-eecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC
Confidence 557889766 66666666544 9999999999997754 3 56777777654 333 7888876
Q ss_pred hHHH
Q 013869 125 YREV 128 (435)
Q Consensus 125 ~~~~ 128 (435)
+...
T Consensus 308 YdG~ 311 (714)
T PRK15400 308 YDGL 311 (714)
T ss_pred CccE
Confidence 6644
No 331
>PLN02409 serine--glyoxylate aminotransaminase
Probab=23.32 E-value=3.6e+02 Score=25.92 Aligned_cols=14 Identities=7% Similarity=0.192 Sum_probs=6.0
Q ss_pred HHHHhcCCccEEEe
Q 013869 108 LHVMHDSDISMVLS 121 (435)
Q Consensus 108 ~~~l~~~~~~~vi~ 121 (435)
..++++.+.+++.+
T Consensus 100 ~~~~~~~g~~v~~v 113 (401)
T PLN02409 100 IDQMQRLNFDVDVV 113 (401)
T ss_pred HHHHHHcCCceEEE
Confidence 33444444444444
No 332
>COG2351 Transthyretin-like protein [General function prediction only]
Probab=23.14 E-value=1.1e+02 Score=23.54 Aligned_cols=17 Identities=35% Similarity=0.597 Sum_probs=13.0
Q ss_pred ccceecCCCeEEEecCC
Q 013869 356 TVGNPLPGVQVKIAEDE 372 (435)
Q Consensus 356 ~~G~p~~~~~~~i~d~~ 372 (435)
..|+|-+|+++.+---+
T Consensus 19 a~GkPAagv~V~L~rl~ 35 (124)
T COG2351 19 ASGKPAAGVKVELYRLE 35 (124)
T ss_pred ccCCcCCCCEEEEEEec
Confidence 57999999998775533
No 333
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=23.07 E-value=4.1e+02 Score=26.56 Aligned_cols=76 Identities=16% Similarity=0.115 Sum_probs=51.2
Q ss_pred EeehHHHHHHHHHHHHh---ccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCCcch-hHHHHHHHhhcCCCCC
Q 013869 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV-RGIWQRWRESYPVNGN 264 (435)
Q Consensus 189 ~~t~~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 264 (435)
.+|+..+...+..+... .++.+++++...++-..-. ...+++++..|+.++..++..+ ..+...
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~---------- 113 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDH--PINFFGALKAGARVVHLSPLDGERALSHK---------- 113 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHhcCeEEEecCCCCCHHHHHHH----------
Confidence 58888887776666543 4688999998888865433 2357888899999987766444 344344
Q ss_pred ccccccceeccc
Q 013869 265 RAGEAITAFTGV 276 (435)
Q Consensus 265 i~~~~~t~~~~~ 276 (435)
++..+++.++..
T Consensus 114 i~~~~~~~vi~~ 125 (541)
T TIGR03205 114 LSDSGARLLITS 125 (541)
T ss_pred HhhcCceEEEEe
Confidence 444566666543
No 334
>PRK12582 acyl-CoA synthetase; Provisional
Probab=22.79 E-value=3.8e+02 Score=27.52 Aligned_cols=56 Identities=16% Similarity=0.035 Sum_probs=43.2
Q ss_pred EEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC
Q 013869 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK 245 (435)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~ 245 (435)
-.+|++.+...+..+...+ ++.+++++..+++-..-. ...+++++..|+.++..++
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~G~v~vpl~p 137 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEH--ALMTLAAMQAGVPAAPVSP 137 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH--HHHHHHHHHcCCeEeeccC
Confidence 4789999888877776644 788999999988865433 3458899999999888765
No 335
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=22.73 E-value=2.3e+02 Score=23.97 Aligned_cols=21 Identities=5% Similarity=0.259 Sum_probs=19.4
Q ss_pred cccCHHHHHHHHHHHHHHHhh
Q 013869 25 KSYSYDQLASSALRISSLLCS 45 (435)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~ 45 (435)
.-+|+.|+.++++++|..+.+
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~ 30 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIAS 30 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHH
Confidence 458999999999999999988
No 336
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=22.63 E-value=5.4e+02 Score=23.94 Aligned_cols=66 Identities=12% Similarity=0.151 Sum_probs=45.9
Q ss_pred ccCCCCCeEEEEeCCC-HHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEe--chhhHHHHHHH
Q 013869 63 LAGGCGARIGIVAKPS-FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLS--TEDYREVLQNV 132 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~--~~~~~~~~~~~ 132 (435)
.++++|+.|.+....+ +-.+++.||-..-..+++.. .+.++.. .+++.+++.++. +.++.+.+.+.
T Consensus 138 ~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~---~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~ 206 (326)
T COG0604 138 AGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVV---SSSEKLE-LLKELGADHVINYREEDFVEQVREL 206 (326)
T ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEe---cCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHH
Confidence 5789999999998666 88888888874432333322 2445566 899999999998 33455555444
No 337
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=22.60 E-value=5.9e+02 Score=24.69 Aligned_cols=61 Identities=11% Similarity=0.036 Sum_probs=41.5
Q ss_pred ccCCCCCeEEEEeCCC--HH--HHHHHH--HHHHhCCeE---EeCCCCCCHHHHHHHHhcCCccEEEech
Q 013869 63 LAGGCGARIGIVAKPS--FE--FVAGVL--GTWFSGCIA---VPLALSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~--~~--~~~~~l--A~~~~G~~~---v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
..+++||.|.+.++.. .+ .....+ .+.+.|+.+ .-.+-+.+.+++..+++..+|+.+|--.
T Consensus 314 i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ipvH 383 (422)
T TIGR00649 314 IRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIPVH 383 (422)
T ss_pred EEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEecC
Confidence 3567899999888444 33 122223 255678854 3345677899999999999999877443
No 338
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=22.46 E-value=2.6e+02 Score=23.04 Aligned_cols=19 Identities=5% Similarity=0.160 Sum_probs=18.1
Q ss_pred cCHHHHHHHHHHHHHHHhh
Q 013869 27 YSYDQLASSALRISSLLCS 45 (435)
Q Consensus 27 ~Ty~el~~~~~~la~~L~~ 45 (435)
+||.|+.+.++++|..+.+
T Consensus 3 is~~~i~~~i~~lA~~I~~ 21 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITE 21 (166)
T ss_pred cCHHHHHHHHHHHHHHHHH
Confidence 7999999999999999987
No 339
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=22.23 E-value=5.7e+02 Score=23.52 Aligned_cols=38 Identities=11% Similarity=0.043 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCH--HHHHHHHhcCCccE
Q 013869 81 FVAGVLGTWFSGCIAVPLALSYPE--SELLHVMHDSDISM 118 (435)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~--~~l~~~l~~~~~~~ 118 (435)
..+...|++..|+.++-..|+... ..+..+.++.+.-+
T Consensus 189 S~~YA~AAl~~g~~fvN~tP~~~a~~P~l~ela~~~gvpi 228 (295)
T PF07994_consen 189 SMLYAYAALEAGVPFVNGTPSNIADDPALVELAEEKGVPI 228 (295)
T ss_dssp HHHHHHHHHHTTEEEEE-SSSTTTTSHHHHHHHHHHTEEE
T ss_pred HHHHHHHHHHCCCCeEeccCccccCCHHHHHHHHHcCCCe
Confidence 456778999999999988776655 56777777766553
No 340
>PRK09192 acyl-CoA synthetase; Validated
Probab=22.21 E-value=5.6e+02 Score=25.91 Aligned_cols=86 Identities=12% Similarity=0.064 Sum_probs=58.1
Q ss_pred eEEeehHHHHHHHHHHHHhc---cCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEcCC-cc-------hhHHHHHH
Q 013869 187 GVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FS-------VRGIWQRW 255 (435)
Q Consensus 187 ~v~~t~~~l~~~~~~~~~~~---~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~~~-~~-------~~~~~~~~ 255 (435)
.-.+|+..+...+..+...+ ++.+++++..+++-+--. +..+++++..|+..+.++. +. .+.+...
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~- 123 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDF--VEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGM- 123 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhH--HHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHH-
Confidence 35689999887777766544 788999999888885443 3358899999999988853 11 2333333
Q ss_pred HhhcCCCCCccccccceeccccHHHHHHH
Q 013869 256 RESYPVNGNRAGEAITAFTGVPTMYTRLI 284 (435)
Q Consensus 256 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 284 (435)
++..++..++........+.
T Consensus 124 ---------i~~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 124 ---------LASAQPAAIITPDELLPWVN 143 (579)
T ss_pred ---------HHhcCCCEEEeChHHHHHHH
Confidence 55567777777665554443
No 341
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.06 E-value=7.4e+02 Score=24.09 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=35.3
Q ss_pred eehHHHHHHHHHHH---HhccCCCCCeeEEeecchhhhHHHHHHHHHHHcCCEEEEc
Q 013869 190 HTHKSIDAQVQMLT---EAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (435)
Q Consensus 190 ~t~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~~~~ 243 (435)
+|++.+...+...+ ...++.++|+++.-+|- ...++..+|.-+-.|..-++.
T Consensus 54 ~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN--~~ef~~~~FALlrlGv~PVlA 108 (542)
T COG1021 54 LSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPN--VAEFYITFFALLRLGVAPVLA 108 (542)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCc--hHHHHHHHHHHHHcCcchhhc
Confidence 78888877666654 45689999999988876 444455566656667554443
No 342
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=21.89 E-value=7.1e+02 Score=23.82 Aligned_cols=86 Identities=21% Similarity=0.152 Sum_probs=51.8
Q ss_pred CcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCH--HHHHHHHHHHHhCCeEEeCCCC
Q 013869 24 QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALS 101 (435)
Q Consensus 24 ~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~ 101 (435)
+..+|++.+...+..++..+.- ..++.+++..++|-+- -+....+..+..|+.++... .
T Consensus 112 gV~~sh~~l~~~~~~~~~~~~~------------------~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~ 172 (386)
T TIGR02372 112 PVTHSWAALLSEAQAIAKILGE------------------RPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-A 172 (386)
T ss_pred eeEeeHHHHHHHHHHHHHHhCc------------------CCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-C
Confidence 3568999998888777766532 1133456766666552 23344566677898887664 3
Q ss_pred CCHHHHHHHHhcCCccEEEechhhHHHHH
Q 013869 102 YPESELLHVMHDSDISMVLSTEDYREVLQ 130 (435)
Q Consensus 102 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (435)
.++..+...++.. .+++..+.....+.
T Consensus 173 ~~~~~~l~~i~~~--t~~~~~P~~l~~l~ 199 (386)
T TIGR02372 173 APASGIMRHARPG--DLIVGTPFIWEQLA 199 (386)
T ss_pred CChHHHHHhhccC--CEEEECcHHHHHHH
Confidence 4555444444322 57777777666543
No 343
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=21.18 E-value=5.2e+02 Score=21.97 Aligned_cols=54 Identities=9% Similarity=0.014 Sum_probs=41.3
Q ss_pred eEEEEeCCC----HHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEech
Q 013869 70 RIGIVAKPS----FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 70 ~V~i~~~~~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
+|.+....+ .-..++...+-..|.-++.+-++.|.+++...+++.+|++|..+-
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~ 143 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSA 143 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 455544443 333444455556799999999999999999999999999999885
No 344
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=21.13 E-value=1e+02 Score=26.33 Aligned_cols=57 Identities=12% Similarity=0.131 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHH
Q 013869 31 QLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHV 110 (435)
Q Consensus 31 el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 110 (435)
--.++.+.++.++.++ .++++||.+.+++.. |..++|+ ++...
T Consensus 84 s~lErieg~~~~~l~~----------------~~i~~~DVliviSnS--------------GrNpvpi-------e~A~~ 126 (243)
T COG4821 84 SYLERIEGYAKLFLHR----------------LQIRPNDVLIVISNS--------------GRNPVPI-------EVAEY 126 (243)
T ss_pred chhHhhhhHHHHHHHH----------------hcCCCCCEEEEEeCC--------------CCCCcch-------HHHHH
Confidence 3467888999988886 799999998888764 4455554 25556
Q ss_pred HhcCCccEEEechh
Q 013869 111 MHDSDISMVLSTED 124 (435)
Q Consensus 111 l~~~~~~~vi~~~~ 124 (435)
.++.++++|....-
T Consensus 127 ~rekGa~vI~vTSl 140 (243)
T COG4821 127 AREKGAKVIAVTSL 140 (243)
T ss_pred HHhcCCeEEEEehh
Confidence 67777777776653
No 345
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=21.13 E-value=2.3e+02 Score=26.76 Aligned_cols=56 Identities=16% Similarity=0.249 Sum_probs=37.0
Q ss_pred ccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCC-----CCCHHHHHHHHhcCCccEEEec
Q 013869 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-----SYPESELLHVMHDSDISMVLST 122 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~vi~~ 122 (435)
+|+++||.|++- ...+....-|+..+|+.++.++- ...++.+...+..-. ++|+..
T Consensus 60 l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 60 LGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp TTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred cCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 588999988865 44566777888999999988753 456777777776544 444443
No 346
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=21.03 E-value=3e+02 Score=25.74 Aligned_cols=61 Identities=8% Similarity=-0.068 Sum_probs=50.2
Q ss_pred cCCCCCeEEEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechh
Q 013869 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (435)
Q Consensus 64 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (435)
-+.+|..+.+=...+-.-+...+.|..-|..++..-|..-..+...+|+..++.+|.++..
T Consensus 99 ~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a 159 (362)
T KOG1252|consen 99 LITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPA 159 (362)
T ss_pred CccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChH
Confidence 5688988888877777788888888889998887766655566788999999999999973
No 347
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=20.90 E-value=6.5e+02 Score=22.99 Aligned_cols=75 Identities=9% Similarity=0.108 Sum_probs=46.9
Q ss_pred CCCceEEeehH--HHHHHHHHHHHhccCCCCCeeEEeecchhhhHHHHHHHHHH-HcCCEEEEc-CCcchhHHHHHHHh
Q 013869 183 GKPKGVVHTHK--SIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPL-YAGATVEFM-PKFSVRGIWQRWRE 257 (435)
Q Consensus 183 G~pK~v~~t~~--~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l-~~G~~~~~~-~~~~~~~~~~~~~~ 257 (435)
|.....+++|+ .=..+++...+.+--....++...+..+...-++.-++-|- ..|..++|. +..+...++.+..+
T Consensus 117 g~Tr~~vy~qPp~~~~p~IKE~vR~~I~~A~kVIAIVMD~FTD~dIf~DLleAa~kR~VpVYiLLD~~~~~~Fl~Mc~~ 195 (284)
T PF07894_consen 117 GVTRATVYFQPPKDGQPHIKEVVRRMIQQAQKVIAIVMDVFTDVDIFCDLLEAANKRGVPVYILLDEQNLPHFLEMCEK 195 (284)
T ss_pred CCceEEEEeCCCCCCCCCHHHHHHHHHHHhcceeEEEeeccccHHHHHHHHHHHHhcCCcEEEEechhcChHHHHHHHH
Confidence 44455566665 22223344444443456678888899988888888888777 667777665 55566666665433
No 348
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=20.87 E-value=3.9e+02 Score=22.06 Aligned_cols=90 Identities=9% Similarity=-0.035 Sum_probs=54.1
Q ss_pred HHHhcccCCCeeEEEeCCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEE-eCCCHHHHHHH
Q 013869 7 AYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIV-AKPSFEFVAGV 85 (435)
Q Consensus 7 ~~~~~~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~-~~~~~~~~~~~ 85 (435)
|.+|++..+..+.+.|.++.+|=.-. ..++++|++|+++ ++. -|.|... .-...+..-.+
T Consensus 6 LmRHgkA~~~~~~~~D~dR~Lt~~G~-~ea~~~a~~L~~~-----------------~~~-~D~VL~Spa~Ra~QTae~v 66 (163)
T COG2062 6 LMRHGKAEWAAPGIADFDRPLTERGR-KEAELVAAWLAGQ-----------------GVE-PDLVLVSPAVRARQTAEIV 66 (163)
T ss_pred EeecccccccCCCCCCccCcCCHHHH-HHHHHHHHHHHhc-----------------CCC-CCEEEeChhHHHHHHHHHH
Confidence 46788888888888888999997765 4589999999996 552 2333322 11123444444
Q ss_pred HHHHHhC--CeEEeCCCCCCHHHHHHHHhcCC
Q 013869 86 LGTWFSG--CIAVPLALSYPESELLHVMHDSD 115 (435)
Q Consensus 86 lA~~~~G--~~~v~l~~~~~~~~l~~~l~~~~ 115 (435)
.+++... ..+--+.|.-.+..+...++...
T Consensus 67 ~~~~~~~~~~~~~~l~p~~d~~~~l~~l~~~~ 98 (163)
T COG2062 67 AEHLGEKKVEVFEELLPNGDPGTVLDYLEALG 98 (163)
T ss_pred HHhhCcccceeccccCCCCCHHHHHHHHHHhc
Confidence 4443323 22333445556666666665554
No 349
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=20.82 E-value=2.2e+02 Score=21.39 Aligned_cols=32 Identities=9% Similarity=-0.066 Sum_probs=26.2
Q ss_pred ccCCCCCeEEEEeCCCHHHHHHHHHHHHhCCe
Q 013869 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCI 94 (435)
Q Consensus 63 ~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 94 (435)
.++.+++.|.+++..+.....+...+..+|..
T Consensus 73 ~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 73 LGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 47788999999999888877777777788864
No 350
>PF13550 Phage-tail_3: Putative phage tail protein
Probab=20.78 E-value=1.4e+02 Score=24.15 Aligned_cols=43 Identities=19% Similarity=0.057 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeC
Q 013869 34 SSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (435)
Q Consensus 34 ~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~ 76 (435)
.++.++|.++.+.......+..-......+.+.+||.|.|-.+
T Consensus 109 ~qA~r~a~~~l~~~~~~r~t~~f~~~~~~~~l~pGDvi~l~~~ 151 (164)
T PF13550_consen 109 SQAQRLAERLLRRSRYERRTVSFTLPPDGLALEPGDVIALSDD 151 (164)
T ss_pred HHHHHHHHHHHHHhhccceEEEEEEChhhccCCCCCEEEEEeC
Confidence 4455666665555443443444444555578999999998866
No 351
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=20.30 E-value=5.4e+02 Score=21.86 Aligned_cols=91 Identities=10% Similarity=-0.015 Sum_probs=56.4
Q ss_pred CCcccCHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEeCCC-H---HHHHHHHHHHHhCCeEEeC
Q 013869 23 DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS-F---EFVAGVLGTWFSGCIAVPL 98 (435)
Q Consensus 23 ~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~i~~~~~-~---~~~~~~lA~~~~G~~~v~l 98 (435)
+..+++..|.+-.+..+-..|...- ...+. ..-..+.+|.+....+ . -..++...+-..|.-++.+
T Consensus 47 ~~~~i~va~e~~as~~~~~~l~~l~--~~~~~--------~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~l 116 (201)
T cd02070 47 EEGEIFVPELLMAADAMKAGLDLLK--PLLGK--------SKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDL 116 (201)
T ss_pred ccCCeeHHHHHHHHHHHHHHHHHHH--HHHhh--------cCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEEC
Confidence 4567888887776655444333310 00000 0111234555554443 2 2334444455679999999
Q ss_pred CCCCCHHHHHHHHhcCCccEEEech
Q 013869 99 ALSYPESELLHVMHDSDISMVLSTE 123 (435)
Q Consensus 99 ~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (435)
..+.+.+++...+.+.++++|..+-
T Consensus 117 G~~~p~~~l~~~~~~~~~d~v~lS~ 141 (201)
T cd02070 117 GRDVPPEEFVEAVKEHKPDILGLSA 141 (201)
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEec
Confidence 9999999999999999999998875
No 352
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=20.24 E-value=84 Score=21.55 Aligned_cols=11 Identities=18% Similarity=0.241 Sum_probs=6.9
Q ss_pred ccCCCCCeEEE
Q 013869 63 LAGGCGARIGI 73 (435)
Q Consensus 63 ~g~~~g~~V~i 73 (435)
+|+++||.|-|
T Consensus 52 ~G~~~GD~V~I 62 (69)
T PF09269_consen 52 AGAKEGDTVRI 62 (69)
T ss_dssp TT--TT-EEEE
T ss_pred cCCCCCCEEEE
Confidence 69999999976
No 353
>PRK08813 threonine dehydratase; Provisional
Probab=20.04 E-value=7.5e+02 Score=23.39 Aligned_cols=57 Identities=11% Similarity=0.021 Sum_probs=43.3
Q ss_pred EEEeCCCHHHHHHHHHHHHhCCeEEeCCCCCCHHHHHHHHhcCCccEEEechhhHHH
Q 013869 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (435)
Q Consensus 72 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (435)
.+....+-.-..+.++|...|..+..+-|...+......++..+++++.+..++.+.
T Consensus 84 VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~~~~~a 140 (349)
T PRK08813 84 VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGNSYDEA 140 (349)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 355666778888888999999888766555555566777899999999998766544
Done!