Your job contains 1 sequence.
>013873
MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG
ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD
GRILVSCGTDCTVKLWNVPVATLTDSDDSTDNSSEPLAVYVWKNSFWAVDHQWEGDLFAT
AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR
KVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQY
NGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQRKH
AYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLRRTMMEAERRKAERRKAHSAPGSIV
TEPVRKRRIIKEVE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013873
(434 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121328 - symbol:AT4G28450 "AT4G28450" species... 1069 1.1e-187 2
UNIPROTKB|F1P9T8 - symbol:DCAF13 "Uncharacterized protein... 1030 5.3e-104 1
UNIPROTKB|Q5ZLK1 - symbol:DCAF13 "DDB1- and CUL4-associat... 1021 4.7e-103 1
MGI|MGI:2684929 - symbol:Dcaf13 "DDB1 and CUL4 associated... 1019 7.7e-103 1
UNIPROTKB|Q9NV06 - symbol:DCAF13 "DDB1- and CUL4-associat... 1018 9.8e-103 1
UNIPROTKB|F1S1E1 - symbol:DCAF13 "Uncharacterized protein... 1018 9.8e-103 1
UNIPROTKB|Q5R4T8 - symbol:DCAF13 "DDB1- and CUL4-associat... 1014 2.6e-102 1
RGD|1308458 - symbol:Dcaf13 "DDB1 and CUL4 associated fac... 1010 6.9e-102 1
ZFIN|ZDB-GENE-040426-703 - symbol:dcaf13 "ddb1 and cul4 a... 1004 3.0e-101 1
FB|FBgn0036500 - symbol:CG7275 species:7227 "Drosophila m... 905 9.3e-91 1
SGD|S000003934 - symbol:SOF1 "Essential protein required ... 465 1.3e-90 2
CGD|CAL0005164 - symbol:SOF1 species:5476 "Candida albica... 460 3.5e-86 2
UNIPROTKB|Q5A7Q9 - symbol:SOF1 "Putative uncharacterized ... 460 3.5e-86 2
ASPGD|ASPL0000009210 - symbol:AN4226 species:162425 "Emer... 813 5.2e-81 1
UNIPROTKB|Q6NVS5 - symbol:dcaf13 "DDB1- and CUL4-associat... 804 4.7e-80 1
UNIPROTKB|Q7ZYQ6 - symbol:dcaf13 "DDB1- and CUL4-associat... 802 7.6e-80 1
DICTYBASE|DDB_G0276815 - symbol:DDB_G0276815 "WD repeat-c... 749 3.1e-74 1
WB|WBGene00022742 - symbol:ZK430.7 species:6239 "Caenorha... 747 5.1e-74 1
GENEDB_PFALCIPARUM|PFD0455w - symbol:PFD0455w "ribosomal ... 364 1.4e-71 3
UNIPROTKB|Q9U0J4 - symbol:PFD0455w "40S ribosomal process... 364 1.4e-71 3
POMBASE|SPBC1A4.07c - symbol:SPBC1A4.07c "U3 snoRNP-assoc... 688 9.2e-68 1
UNIPROTKB|F1MVI8 - symbol:F1MVI8 "Uncharacterized protein... 641 8.8e-63 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 231 7.1e-16 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 212 1.8e-14 1
UNIPROTKB|B3KPU1 - symbol:GNB2 "Guanine nucleotide-bindin... 130 2.9e-14 2
UNIPROTKB|E7EP32 - symbol:GNB2 "Guanine nucleotide-bindin... 130 1.0e-13 2
UNIPROTKB|P11017 - symbol:GNB2 "Guanine nucleotide-bindin... 130 1.8e-13 2
UNIPROTKB|E2RD95 - symbol:GNB2 "Uncharacterized protein" ... 130 1.8e-13 2
UNIPROTKB|P62879 - symbol:GNB2 "Guanine nucleotide-bindin... 130 1.8e-13 2
MGI|MGI:95784 - symbol:Gnb2 "guanine nucleotide binding p... 130 1.8e-13 2
RGD|69319 - symbol:Gnb2 "guanine nucleotide binding prote... 130 1.8e-13 2
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 200 2.3e-13 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 128 2.9e-13 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 197 6.7e-13 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 188 2.8e-12 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 188 6.4e-12 1
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 121 7.8e-12 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 139 9.3e-12 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 183 1.7e-11 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 185 2.1e-11 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 141 2.5e-11 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 182 3.1e-11 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 178 3.9e-11 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 181 4.0e-11 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 180 4.9e-11 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 181 5.4e-11 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 135 7.9e-11 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 187 8.3e-11 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 179 9.1e-11 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 118 9.6e-11 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 160 9.7e-11 2
WB|WBGene00022119 - symbol:Y71F9AL.17 species:6239 "Caeno... 184 1.1e-10 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 170 1.1e-10 3
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 160 1.2e-10 2
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 177 1.5e-10 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 170 2.7e-10 1
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 157 2.8e-10 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 174 2.9e-10 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 173 3.0e-10 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 138 3.1e-10 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 173 3.2e-10 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 165 3.7e-10 2
RGD|1359599 - symbol:Wsb2 "WD repeat and SOCS box-contain... 114 4.0e-10 2
MGI|MGI:2144041 - symbol:Wsb2 "WD repeat and SOCS box-con... 114 5.1e-10 2
FB|FBgn0023423 - symbol:slmb "supernumerary limbs" specie... 122 5.4e-10 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 122 5.7e-10 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 172 5.7e-10 1
UNIPROTKB|F1SAY9 - symbol:WDR3 "Uncharacterized protein" ... 122 6.4e-10 2
UNIPROTKB|F1MUW4 - symbol:APAF1 "Uncharacterized protein"... 116 6.5e-10 2
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 171 7.2e-10 1
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 176 8.1e-10 1
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 161 8.2e-10 2
RGD|1309121 - symbol:Fbxw11 "F-box and WD repeat domain c... 119 8.3e-10 2
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 132 9.4e-10 2
UNIPROTKB|F1M373 - symbol:Fbxw11 "Protein Fbxw11" species... 119 1.0e-09 2
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 170 1.1e-09 1
MGI|MGI:1858197 - symbol:Plrg1 "pleiotropic regulator 1, ... 170 1.1e-09 1
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 170 1.1e-09 1
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 170 1.1e-09 1
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 170 1.1e-09 1
MGI|MGI:2144023 - symbol:Fbxw11 "F-box and WD-40 domain p... 119 1.1e-09 2
POMBASE|SPAC25H1.08c - symbol:SPAC25H1.08c "ribosome biog... 111 1.3e-09 2
RGD|1307480 - symbol:Wdr3 "WD repeat domain 3" species:10... 118 1.4e-09 2
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi... 173 1.7e-09 1
UNIPROTKB|F1NC11 - symbol:WDR3 "Uncharacterized protein" ... 113 1.8e-09 2
UNIPROTKB|F1RKG5 - symbol:WSB2 "Uncharacterized protein" ... 109 1.8e-09 2
UNIPROTKB|Q9NYS7 - symbol:WSB2 "WD repeat and SOCS box-co... 109 1.8e-09 2
WB|WBGene00003009 - symbol:lin-23 species:6239 "Caenorhab... 120 1.9e-09 2
UNIPROTKB|Q09990 - symbol:lin-23 "F-box/WD repeat-contain... 120 1.9e-09 2
UNIPROTKB|Q0V8J1 - symbol:WSB2 "WD repeat and SOCS box-co... 109 1.9e-09 2
UNIPROTKB|F5H280 - symbol:WSB2 "WD repeat and SOCS box-co... 109 1.9e-09 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 167 2.1e-09 1
UNIPROTKB|B4DIE6 - symbol:WSB2 "cDNA FLJ59692, highly sim... 109 2.1e-09 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 166 2.1e-09 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 130 2.7e-09 2
RGD|1359721 - symbol:Btrc "beta-transducin repeat contain... 123 2.7e-09 2
UNIPROTKB|F1NM37 - symbol:TBL3 "Uncharacterized protein" ... 169 2.8e-09 1
UNIPROTKB|E1BM03 - symbol:WDR3 "Uncharacterized protein" ... 118 2.8e-09 2
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 165 3.4e-09 1
UNIPROTKB|F1P6A3 - symbol:WSB2 "Uncharacterized protein" ... 106 4.1e-09 2
WARNING: Descriptions of 703 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2121328 [details] [associations]
symbol:AT4G28450 "AT4G28450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0080008
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:AF372943
EMBL:AY045624 EMBL:AY143901 IPI:IPI00548928 RefSeq:NP_567810.5
UniGene:At.2008 ProteinModelPortal:Q93VK1 SMR:Q93VK1 STRING:Q93VK1
PRIDE:Q93VK1 EnsemblPlants:AT4G28450.1 GeneID:828962
KEGG:ath:AT4G28450 TAIR:At4g28450 InParanoid:Q93VK1
PhylomeDB:Q93VK1 ProtClustDB:CLSN2691268 Genevestigator:Q93VK1
Uniprot:Q93VK1
Length = 452
Score = 1069 (381.4 bits), Expect = 1.1e-187, Sum P(2) = 1.1e-187
Identities = 192/244 (78%), Positives = 217/244 (88%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MK+K +SRS DE+TRERSQDLQRV+HN+DP+LRP EKAVEY RALTAAKLEKIFARPF+G
Sbjct: 1 MKIKTLSRSVDEYTRERSQDLQRVFHNFDPSLRPMEKAVEYQRALTAAKLEKIFARPFVG 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
A+DGHRDG+SCMAKNPNYLKG FS SMDGDIRLWDI++RRTVCQ+ GHQGAVRGLT STD
Sbjct: 61 AMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTD 120
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G +LVSCGTDCTV+LWNVP +L EP A YVWKN+FWAVDHQ+EGDLFAT
Sbjct: 121 GNVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFAT 180
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
AGAQ+DIWNHNRSQP+ SFQWGTD+VISVRFNP EPN+LAT+ASDRSIT+YDLR+SS AR
Sbjct: 181 AGAQLDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAAR 240
Query: 241 KVIM 244
K+IM
Sbjct: 241 KIIM 244
Score = 773 (277.2 bits), Expect = 1.1e-187, Sum P(2) = 1.1e-187
Identities = 150/230 (65%), Positives = 175/230 (76%)
Query: 205 TVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAK 264
T+ +R + A ++ T ++ SI + P + ANED +CYS+D RKLDEAK
Sbjct: 229 TIYDLRLSSAARKIIMMTKTN-SIAWNPME---PMN--LTAANEDGSCYSFDGRKLDEAK 282
Query: 265 CVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSC 324
CVH H SAVMDID+SPTGREFVTGSYDR++RIF YNGG SREIYHTKRMQRVFCVK+SC
Sbjct: 283 CVHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSC 342
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRH 384
DA+YVISGSDDTNLRLWKAKASEQLGV+ PREQ+KH Y+EAVKNRYKHL E+KRIVRHRH
Sbjct: 343 DATYVISGSDDTNLRLWKAKASEQLGVILPREQKKHEYNEAVKNRYKHLSEVKRIVRHRH 402
Query: 385 LPKPIYKAASLXXXXXXXXXXXXXXXXXHSAPGSIVTEPVRKRRIIKEVE 434
LPKPIYKA + HSAPG++VT P+RKR+IIKEVE
Sbjct: 403 LPKPIYKAMGIIRTVNDSKRRKEARRKAHSAPGTVVTAPLRKRKIIKEVE 452
>UNIPROTKB|F1P9T8 [details] [associations]
symbol:DCAF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 CTD:25879
GeneTree:ENSGT00390000005711 KO:K11806 OMA:CASDRSI
InterPro:IPR007287 Pfam:PF04158 EMBL:AAEX03008708
RefSeq:XP_532299.2 Ensembl:ENSCAFT00000001031 GeneID:475065
KEGG:cfa:475065 Uniprot:F1P9T8
Length = 445
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 205/452 (45%), Positives = 278/452 (61%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVK++SR+ D + RE DLQRV NYDP L P E EYVRAL A KLE++FA+PF+
Sbjct: 1 MKVKMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LDGHRDG++C+AK+P L SG+ DG++R+W++ R+ + H+G VRG+
Sbjct: 61 SLDGHRDGVNCLAKHPKSLATVLSGACDGEVRIWNLTKRKCIRTIQAHEGFVRGICTRFC 120
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G + G D TVK W + EPL + K + +DH W+ +FAT
Sbjct: 121 GTSFFTVGDDKTVKQWKMD-------GPGYGEEEEPLHTILGKTVYTGIDHHWKEAVFAT 173
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
G QVDIW+ R+ PI S WG D++ SV+FNP E +L + ASDR+I LYD+R ++P +
Sbjct: 174 CGQQVDIWDEQRTSPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLK 233
Query: 241 KVI--MR----------------ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
KVI MR ANED N Y++D R LD VHM H SAV+D+DYSPT
Sbjct: 234 KVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPT 293
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
G+EFV+ S+D++IRIF + RSRE+YHTKRMQ V CVK++ D+ Y++ GSD+ N+RLWK
Sbjct: 294 GKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWK 353
Query: 343 AKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLXXXXXXX 402
A ASE+LGVL RE+ Y++ +K +++H P IKRI RHRHLPK IY
Sbjct: 354 ANASEKLGVLTSREKAAKDYNQKLKEKFQHHPHIKRIARHRHLPKSIYSQIQEQRIMKEA 413
Query: 403 XXXXXXXXXXHSAPGSIVTEPVRKRRIIKEVE 434
HS PGS+ P +K+ I+ V+
Sbjct: 414 RRRKEVNRLKHSKPGSVSIVPEKKKHIVAVVK 445
>UNIPROTKB|Q5ZLK1 [details] [associations]
symbol:DCAF13 "DDB1- and CUL4-associated factor 13"
species:9031 "Gallus gallus" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 GO:GO:0030529 GO:GO:0006364 GO:GO:0080008
EMBL:AJ719733 IPI:IPI00588762 RefSeq:NP_001026119.1
UniGene:Gga.15424 ProteinModelPortal:Q5ZLK1 STRING:Q5ZLK1
Ensembl:ENSGALT00000025898 GeneID:420263 KEGG:gga:420263 CTD:25879
GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082
HOVERGEN:HBG056998 InParanoid:Q5ZLK1 KO:K11806 OMA:CASDRSI
OrthoDB:EOG4T4CVF NextBio:20823203 InterPro:IPR007287 Pfam:PF04158
Uniprot:Q5ZLK1
Length = 445
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 203/452 (44%), Positives = 279/452 (61%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
M+VKV+SR+ D++ RE DLQRV NYDP L P E A EYVRAL A KLE++FA+PF+
Sbjct: 1 MRVKVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVAREYVRALNATKLERVFAKPFLS 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LDGHRDG++CMAK+P L SG+ DG++R+W++ R+ + H+G VRG+
Sbjct: 61 SLDGHRDGVNCMAKHPKSLSTVLSGACDGEVRIWNLTKRQCIRALQAHEGFVRGMCARFC 120
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G + G D TVK W + EP+ + K + +DH W+ +FAT
Sbjct: 121 GTSFFTVGDDKTVKQWKME-------SPGYGEEEEPIHTILGKTVYTGIDHHWKDAVFAT 173
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
G QVDIW+ R+ P+ S WG D++ SV+FNP E +L + ASDR+I LYD+R S+P +
Sbjct: 174 CGQQVDIWDEQRTSPMCSLTWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRQSTPLK 233
Query: 241 KVI--MR----------------ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
KVI MR ANED N Y++D R L VHM H SAV+D+DYSPT
Sbjct: 234 KVILNMRTNTLCWNPMEAFIFTAANEDYNLYTFDMRFLTSPVMVHMDHVSAVLDVDYSPT 293
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
G+EFV+ S+D+++RIF + G SRE+YHTKRMQ V VK++ D+ Y++ GSD+ N+RLWK
Sbjct: 294 GKEFVSASFDKSVRIFPVDKGHSREVYHTKRMQHVITVKWTSDSRYILCGSDEMNIRLWK 353
Query: 343 AKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLXXXXXXX 402
A ASE+LGVL PRE+ Y++ +K +++H P+IKRI RHRHLPK IY
Sbjct: 354 ANASEKLGVLAPREKAAMNYNQKLKEKFQHHPQIKRIARHRHLPKSIYCQIKEQRIMREA 413
Query: 403 XXXXXXXXXXHSAPGSIVTEPVRKRRIIKEVE 434
HS PGS+ +K+ I+ V+
Sbjct: 414 RRRKELNRRKHSKPGSVPVVSEKKKHIVAVVQ 445
>MGI|MGI:2684929 [details] [associations]
symbol:Dcaf13 "DDB1 and CUL4 associated factor 13"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:2684929 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0030529
GO:GO:0006364 GO:GO:0080008 EMBL:AC164883 CTD:25879
GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082
HOVERGEN:HBG056998 KO:K11806 OMA:CASDRSI OrthoDB:EOG4T4CVF
InterPro:IPR007287 Pfam:PF04158 EMBL:AC165352 EMBL:BC060375
IPI:IPI00129701 RefSeq:NP_941008.2 UniGene:Mm.321937
ProteinModelPortal:Q6PAC3 SMR:Q6PAC3 STRING:Q6PAC3
PhosphoSite:Q6PAC3 PaxDb:Q6PAC3 PRIDE:Q6PAC3
Ensembl:ENSMUST00000022909 GeneID:223499 KEGG:mmu:223499
UCSC:uc007voc.2 InParanoid:Q6PAC3 NextBio:376735 Bgee:Q6PAC3
CleanEx:MM_WDSOF1 Genevestigator:Q6PAC3 Uniprot:Q6PAC3
Length = 445
Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
Identities = 199/452 (44%), Positives = 278/452 (61%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVK++SR+ D + RE D+QRV NYDP L P E EYVRAL A KLE++FA+PF+
Sbjct: 1 MKVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LDGHRDG++C+AK+P L SG+ DG++++W++ R+ + H+G VRG+
Sbjct: 61 SLDGHRDGVNCLAKHPKSLASVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGMCTRFC 120
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G + G D TVK W + EPL + K + +DH W+ +FAT
Sbjct: 121 GTSFFTVGDDKTVKQWKMD-------GPGYGEEEEPLYTVLGKTVYTGIDHHWKDPVFAT 173
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
G QVDIW+ R+ P+ S WG D++ SV+FNP E +L + ASDR+I LYD+R ++P +
Sbjct: 174 CGQQVDIWDEQRTSPVCSMNWGFDSISSVKFNPVETFLLGSCASDRNIVLYDMRQATPLK 233
Query: 241 KVI--MR----------------ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
KVI MR ANED N Y++D R LD VHM H SAV+D+DYSPT
Sbjct: 234 KVILEMRTNTICWNPMEAFNFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPT 293
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
G+EFV+ S+D++IRIF + RSRE+YHTKRMQ V CVK++ D+ Y++ GSD+ N+RLWK
Sbjct: 294 GKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVMCVKWTSDSKYIMCGSDEMNIRLWK 353
Query: 343 AKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLXXXXXXX 402
A ASE+LGVL RE+ + Y++ +K ++++ P +KRI RHRHLPK IY
Sbjct: 354 ANASEKLGVLTSREKAANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRVMKEA 413
Query: 403 XXXXXXXXXXHSAPGSIVTEPVRKRRIIKEVE 434
HS PGS+ RK+ ++ V+
Sbjct: 414 RRRKEMNRRKHSKPGSVPIVSERKKHVVAVVK 445
>UNIPROTKB|Q9NV06 [details] [associations]
symbol:DCAF13 "DDB1- and CUL4-associated factor 13"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOGENOM:HOG000210082 HOVERGEN:HBG056998 KO:K11806 OrthoDB:EOG4T4CVF
InterPro:IPR007287 Pfam:PF04158 EMBL:AF161549 EMBL:AK001874
EMBL:AK027799 EMBL:AK074725 EMBL:BC026067 EMBL:BC101810
EMBL:BC112042 IPI:IPI00306642 IPI:IPI00747916 RefSeq:NP_056235.4
UniGene:Hs.532265 ProteinModelPortal:Q9NV06 SMR:Q9NV06
STRING:Q9NV06 PhosphoSite:Q9NV06 DMDM:160358731 PaxDb:Q9NV06
PeptideAtlas:Q9NV06 PRIDE:Q9NV06 Ensembl:ENST00000297579
GeneID:25879 KEGG:hsa:25879 UCSC:uc003ylm.1 GeneCards:GC08P104426
H-InvDB:HIX0201273 HGNC:HGNC:24535 neXtProt:NX_Q9NV06
PharmGKB:PA165585440 InParanoid:Q9NV06 ChiTaRS:DCAF13
GenomeRNAi:25879 NextBio:47292 ArrayExpress:Q9NV06 Bgee:Q9NV06
CleanEx:HS_WDSOF1 Genevestigator:Q9NV06 Uniprot:Q9NV06
Length = 445
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 202/452 (44%), Positives = 276/452 (61%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVK++SR+ D + RE DLQRV NYDP L P E EY+RAL A KLE++FA+PF+
Sbjct: 1 MKVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLA 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LDGHRDG++C+AK+P L SG+ DG++R+W++ R + H+G VRG+
Sbjct: 61 SLDGHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFC 120
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G + G D TVK W + EPL + K + +DH W+ +FAT
Sbjct: 121 GTSFFTVGDDKTVKQWKMD-------GPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFAT 173
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
G QVDIW+ R+ PI S WG D++ SV+FNP E +L + ASDR+I LYD+R ++P +
Sbjct: 174 CGQQVDIWDEQRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLK 233
Query: 241 KVI--MR----------------ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
KVI MR ANED N Y++D R LD VHM H SAV+D+DYSPT
Sbjct: 234 KVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPT 293
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
G+EFV+ S+D++IRIF + RSRE+YHTKRMQ V CVK++ D+ Y++ GSD+ N+RLWK
Sbjct: 294 GKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWK 353
Query: 343 AKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLXXXXXXX 402
A ASE+LGVL RE+ Y++ +K +++H P IKRI RHRHLPK IY
Sbjct: 354 ANASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEA 413
Query: 403 XXXXXXXXXXHSAPGSIVTEPVRKRRIIKEVE 434
HS PGS+ +K+ ++ V+
Sbjct: 414 RRRKEVNRIKHSKPGSVPLVSEKKKHVVAVVK 445
>UNIPROTKB|F1S1E1 [details] [associations]
symbol:DCAF13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 GeneTree:ENSGT00390000005711
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:CU469011
Ensembl:ENSSSCT00000006637 Uniprot:F1S1E1
Length = 445
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 204/452 (45%), Positives = 278/452 (61%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVK++SR+ D + RE DLQRV NYDP L P E EYVRAL A KLE++FA+PF+
Sbjct: 1 MKVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYVRALNATKLERVFAKPFLA 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LDGHRDG++C+AK+P L SG+ DG++R+W++ R+ + H+G VRG+
Sbjct: 61 SLDGHRDGVNCLAKHPKSLATVLSGACDGEVRIWNLTKRKCIRTIQAHEGFVRGICTRFC 120
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G + G D TVK W + + EPL + K + +DH W+ +FAT
Sbjct: 121 GTSFFTVGDDKTVKQWKMDGPSYGEDE-------EPLHTILGKTVYTGIDHHWKEAIFAT 173
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
G QVDIW+ R+ PI S WG D++ SV+FNP E +L + ASDR+I LYD+R ++P +
Sbjct: 174 CGQQVDIWDEQRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLK 233
Query: 241 KVI--MR----------------ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
KVI MR ANED N Y++D R LD VHM H SAV+D+DYSPT
Sbjct: 234 KVILDMRTNTIGWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPT 293
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
G+EFV+ S+D++IRIF + RSRE+YHTKRMQ V CVK++ D+ Y++ GSD+ N+RLWK
Sbjct: 294 GKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWK 353
Query: 343 AKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLXXXXXXX 402
A ASE+LGVL RE+ Y++ +K +++H P IKRI RHRHLPK IY
Sbjct: 354 ANASEKLGVLTSREKAATDYNQRLKEKFQHHPHIKRISRHRHLPKSIYSQIQEQRIMKEA 413
Query: 403 XXXXXXXXXXHSAPGSIVTEPVRKRRIIKEVE 434
HS PGS+ +K+ I+ V+
Sbjct: 414 RRRKELNRIKHSKPGSVRIVSEKKKHIVAVVK 445
>UNIPROTKB|Q5R4T8 [details] [associations]
symbol:DCAF13 "DDB1- and CUL4-associated factor 13"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOVERGEN:HBG056998 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:CR861153 RefSeq:NP_001126898.1 UniGene:Pab.18251
ProteinModelPortal:Q5R4T8 GeneID:100173913 KEGG:pon:100173913
InParanoid:Q5R4T8 Uniprot:Q5R4T8
Length = 445
Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
Identities = 201/452 (44%), Positives = 275/452 (60%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVK++SR+ D + RE DLQRV NYDP L P E EYVRAL A KLE++FA+PF+
Sbjct: 1 MKVKMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LDGHRDG++C+AK+P L SG+ DG++R+W++ R + H+G VRG+
Sbjct: 61 SLDGHRDGVNCLAKHPKNLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFC 120
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G + G D TVK W + EPL + K + +DH W+ +FAT
Sbjct: 121 GTSFFTVGDDKTVKQWKMD-------GPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFAT 173
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
G QVDIW+ R+ P+ S WG D++ SV+FNP E +L + ASDR+I LYD+R ++P +
Sbjct: 174 CGQQVDIWDEQRTNPVCSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLK 233
Query: 241 KVI--MR----------------ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
KVI MR ANED N Y++D LD VHM H SAV+D+DYSPT
Sbjct: 234 KVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMSALDTPVMVHMDHVSAVLDVDYSPT 293
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
G+EFV+ S+D++IRIF + RSRE+YHTKRMQ V CVK++ D+ Y++ GSD+ N+RLWK
Sbjct: 294 GKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWK 353
Query: 343 AKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLXXXXXXX 402
A ASE+LGVL RE+ Y++ +K +++H P IKRI RHRHLPK IY
Sbjct: 354 ANASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEA 413
Query: 403 XXXXXXXXXXHSAPGSIVTEPVRKRRIIKEVE 434
HS PGS+ +K+ ++ V+
Sbjct: 414 RRRKEVNRIKHSKPGSVPIVSEKKKHVVAVVK 445
>RGD|1308458 [details] [associations]
symbol:Dcaf13 "DDB1 and CUL4 associated factor 13" species:10116
"Rattus norvegicus" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308458 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0080008 CTD:25879
GeneTree:ENSGT00390000005711 KO:K11806 InterPro:IPR007287
Pfam:PF04158 IPI:IPI00393552 RefSeq:NP_001167029.1 UniGene:Rn.41457
ProteinModelPortal:F1M7P1 Ensembl:ENSRNOT00000005803 GeneID:362902
KEGG:rno:362902 UCSC:RGD:1308458 NextBio:681728 ArrayExpress:F1M7P1
Uniprot:F1M7P1
Length = 445
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 197/452 (43%), Positives = 277/452 (61%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVK++SR+ D + RE D+QRV NYDP L P E EYVRAL A KLE++FA+PF+
Sbjct: 1 MKVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LDGHRDG++C+AK+P L SG+ DG++++W++ R+ + H+G VRG+
Sbjct: 61 SLDGHRDGVNCLAKHPKSLATVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGICTRFC 120
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G + G D TVK W + EPL + K + +DH W+ FAT
Sbjct: 121 GTSFFTVGDDKTVKQWKMD-------GPGCGEEEEPLYTVLGKTVYTGIDHHWKDPAFAT 173
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
G QVDIW+ R+ P+ S WG D++ SV+FNP E +L + ASDR+I LYD+R ++P +
Sbjct: 174 CGQQVDIWDEQRTSPVCSMNWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRQATPLK 233
Query: 241 KVI--MR----------------ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
KVI MR ANED N Y++D R LD VH+ H SAV+D+DYSPT
Sbjct: 234 KVILDMRTNTICWNPMEAFNFTAANEDYNLYTFDMRALDTPVMVHLDHVSAVLDVDYSPT 293
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
G+EFV+ S+D++IRIF + RSRE+YHT+RMQ V CVK++ D+ Y++ GSD+ N+RLWK
Sbjct: 294 GKEFVSASFDKSIRIFPVDKSRSREVYHTRRMQHVICVKWTSDSKYILCGSDEMNIRLWK 353
Query: 343 AKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLXXXXXXX 402
A ASE+LGVL RE+ + Y++ +K ++++ P +KRI RHRHLPK IY
Sbjct: 354 ANASEKLGVLTSRERAANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRVMKEA 413
Query: 403 XXXXXXXXXXHSAPGSIVTEPVRKRRIIKEVE 434
HS PGS+ RK+ ++ V+
Sbjct: 414 RRRKEMNRRKHSKPGSVPVVSERKKHVVAVVK 445
>ZFIN|ZDB-GENE-040426-703 [details] [associations]
symbol:dcaf13 "ddb1 and cul4 associated factor 13"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
ZFIN:ZDB-GENE-040426-703 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOGENOM:HOG000210082 HOVERGEN:HBG056998 KO:K11806 OrthoDB:EOG4T4CVF
InterPro:IPR007287 Pfam:PF04158 EMBL:BC044155 IPI:IPI00618021
RefSeq:NP_956423.1 UniGene:Dr.79195 ProteinModelPortal:Q803X4
STRING:Q803X4 GeneID:393097 KEGG:dre:393097 InParanoid:Q803X4
NextBio:20814171 ArrayExpress:Q803X4 Uniprot:Q803X4
Length = 445
Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
Identities = 201/452 (44%), Positives = 273/452 (60%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVKV+ R+ D++ RE ++D+QRV NYDP L P E EY RAL A KLE++FA+PF+
Sbjct: 1 MKVKVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVA 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LDGHRD ISC+ K+ L SG+ DG++++W++ R H+G VRG+
Sbjct: 61 SLDGHRDVISCITKHAKSLSTVISGACDGEVKVWNLPKRECTRTVQAHEGFVRGICSRFC 120
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G + G D T+K WN+ EP+ + K F +DH F T
Sbjct: 121 GTSFFTVGDDKTIKQWNMEAP-------GYGVREEPINTILGKAVFTGIDHHQREGTFVT 173
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
G VDIW+ RS P+ SF WG D+ SVR+NP EP++LA+ ASDRSI LYD R S+P R
Sbjct: 174 CGQTVDIWDEQRSSPVLSFSWGVDSFSSVRYNPVEPDLLASCASDRSIVLYDTRESAPLR 233
Query: 241 KVIMR------------------ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
KVIM+ ANED N Y+YD R LD VHM H SAV+D+DYSPT
Sbjct: 234 KVIMQLRSNTLCWNPMEAYYFTCANEDYNLYTYDIRNLDVPVTVHMDHVSAVLDVDYSPT 293
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
GREFV+ S+D+TIRIF + G SRE+YHTKRMQ V CVK+S D+ +++SGSD+ N+RLWK
Sbjct: 294 GREFVSASFDKTIRIFPKDKGHSREVYHTKRMQHVICVKWSADSKFIMSGSDEMNIRLWK 353
Query: 343 AKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLXXXXXXX 402
A ASE+LGVL RE+ Y++ + +++H P+++RI RHRHLP+ + K
Sbjct: 354 ANASEKLGVLSTREKTAANYNKKLIQKFQHHPQVRRIARHRHLPRDVLKQKRELKEMKEA 413
Query: 403 XXXXXXXXXXHSAPGSIVTEPVRKRRIIKEVE 434
HS PGS+ +++ ++K VE
Sbjct: 414 RRRKEQNVRKHSKPGSVPLLTEKEKHVVKVVE 445
>FB|FBgn0036500 [details] [associations]
symbol:CG7275 species:7227 "Drosophila melanogaster"
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006911 EMBL:AE014296 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00390000005711
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:AY058590
RefSeq:NP_648767.1 UniGene:Dm.4153 SMR:Q9VUN7 STRING:Q9VUN7
EnsemblMetazoa:FBtr0075547 GeneID:39669 KEGG:dme:Dmel_CG7275
UCSC:CG7275-RA FlyBase:FBgn0036500 InParanoid:Q9VUN7
OrthoDB:EOG49S4NW GenomeRNAi:39669 NextBio:814787 Uniprot:Q9VUN7
Length = 446
Score = 905 (323.6 bits), Expect = 9.3e-91, P = 9.3e-91
Identities = 178/410 (43%), Positives = 248/410 (60%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVK+ISR+ D + RE ++ NYDP+L P E EYVRAL A KL+++FA+PF+
Sbjct: 1 MKVKMISRNPDNYVRETKLQQHKMPRNYDPSLHPLEGPREYVRALNATKLDRVFAKPFVC 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GHRDG+SC K+P L +G+ DG++R+WD+ANR + + H G VRG+ + +
Sbjct: 61 NLSGHRDGVSCFGKHPKQLSTLATGAYDGEVRIWDLANRISSRNFVAHDGFVRGIAYTQN 120
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G + + G D T+K+W + P+ + K + H + FAT
Sbjct: 121 GGRIFTVGDDKTIKVWKAEAPEVGEDEV-------PVNTILSKFGLHGISHNRRDNKFAT 173
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
G IW+ + P+ + +WG DT+ ++ +NP E ++LA ASDRSI LYD R + P R
Sbjct: 174 CGEVCAIWDERHNDPLKTLKWGVDTLHTISYNPVETSILACCASDRSIILYDQREAQPLR 233
Query: 241 KVIMR------------------ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
KV++ ANEDCN Y++D+RKL VH H SAV D+DYSPT
Sbjct: 234 KVVLTMKSNKLAWNPMEAFNFTVANEDCNLYTFDTRKLQTPLKVHFDHVSAVTDVDYSPT 293
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
G+EFV+ SYD+TIRI+ + SR+IYHTKRMQ V CV +S D YV SGSD+ N+R+WK
Sbjct: 294 GKEFVSASYDKTIRIYNAHHSHSRDIYHTKRMQHVVCVAWSLDNRYVFSGSDEMNVRMWK 353
Query: 343 AKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKA 392
A ASE+LGV+ PRE+ Y EA+K +Y P+IKRI RHR +P+ + A
Sbjct: 354 ANASEKLGVIRPRERVNFNYQEALKQKYAAHPQIKRIARHRQVPRHVLNA 403
>SGD|S000003934 [details] [associations]
symbol:SOF1 "Essential protein required for biogenesis of the
40S ribosomal subunit" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000003934 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006945 GO:GO:0030686 EMBL:X91488 GO:GO:0032040
GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082 KO:K11806
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 OrthoDB:EOG4GXJWG
EMBL:X70052 EMBL:Z73116 PIR:S35323 RefSeq:NP_013090.1
ProteinModelPortal:P33750 SMR:P33750 DIP:DIP-746N IntAct:P33750
MINT:MINT-635582 STRING:P33750 PaxDb:P33750 PeptideAtlas:P33750
EnsemblFungi:YLL011W GeneID:850649 KEGG:sce:YLL011W CYGD:YLL011w
NextBio:966596 Genevestigator:P33750 GermOnline:YLL011W
GO:GO:0000462 Uniprot:P33750
Length = 489
Score = 465 (168.7 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 100/268 (37%), Positives = 150/268 (55%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MK+K I RS D++ +S ++ N +P L P E+A EY +AL A KLE++FA+PF+G
Sbjct: 1 MKIKTIKRSADDYVPVKSTQESQMPRNLNPELHPFERAREYTKALNATKLERMFAKPFVG 60
Query: 61 ALD-GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
L GHRDG+ +AKN L +GS DG I+ W+++ R + H G V GL V+
Sbjct: 61 QLGYGHRDGVYAIAKNYGSLNKLATGSADGVIKYWNMSTREEFVSFKAHYGLVTGLCVTQ 120
Query: 120 ----DGR-------ILVSCGTDCTVKLWNVPV---ATLXXXXXXXXXXXEPLA-VYVWKN 164
D + ++SC D TVKLW++ V + E L + ++
Sbjct: 121 PRFHDKKPDLKSQNFMLSCSDDKTVKLWSINVDDYSNKNSSDNDSVTNEEGLIRTFDGES 180
Query: 165 SFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTAS 224
+F +D E FAT GA++ +W+ NR +P++ WG D + S++FN E ++LA+T S
Sbjct: 181 AFQGIDSHRENSTFATGGAKIHLWDVNRLKPVSDLSWGADNITSLKFNQNETDILASTGS 240
Query: 225 DRSITLYDLRMSSPARKVI--MRANEDC 250
D SI LYDLR +SP +K++ MR N C
Sbjct: 241 DNSIVLYDLRTNSPTQKIVQTMRTNAIC 268
Score = 458 (166.3 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 88/150 (58%), Positives = 110/150 (73%)
Query: 246 ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS 305
ANED N Y YD R L + V H SAVMD+D+SPTG E VTGSYD++IRI++ N G S
Sbjct: 280 ANEDHNAYYYDMRNLSRSLNVFKDHVSAVMDVDFSPTGDEIVTGSYDKSIRIYKTNHGHS 339
Query: 306 REIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHEA 365
REIYHTKRMQ VF VK+S D+ Y+ISGSDD N+RLW++KA E+ V RE+ K Y E
Sbjct: 340 REIYHTKRMQHVFQVKYSMDSKYIISGSDDGNVRLWRSKAWERSNVKTTREKNKLEYDEK 399
Query: 366 VKNRYKHLPEIKRIVRHRHLPKPIYKAASL 395
+K R++H+PEIKRI RHRH+P+ I KA +
Sbjct: 400 LKERFRHMPEIKRISRHRHVPQVIKKAQEI 429
Score = 51 (23.0 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 14/81 (17%), Positives = 31/81 (38%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
SP I+ + D + Y + + H V + YS + ++GS D +R
Sbjct: 314 SPTGDEIVTGSYDKSIRIYKTNHGHSREIYHTKRMQHVFQVKYSMDSKYIISGSDDGNVR 373
Query: 297 IFQYNGGRSREIYHTKRMQRV 317
+++ + T+ ++
Sbjct: 374 LWRSKAWERSNVKTTREKNKL 394
Score = 46 (21.3 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 17/74 (22%), Positives = 32/74 (43%)
Query: 171 HQWEGDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSI 228
+Q E D+ A+ G+ + +++ + P T ++ +NP E T D +
Sbjct: 228 NQNETDILASTGSDNSIVLYDLRTNSPTQKIVQ-TMRTNAICWNPMEAFNFVTANEDHNA 286
Query: 229 TLYDLRMSSPARKV 242
YD+R S + V
Sbjct: 287 YYYDMRNLSRSLNV 300
>CGD|CAL0005164 [details] [associations]
symbol:SOF1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005164 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000210082 KO:K11806
InterPro:IPR007287 Pfam:PF04158 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717685.1 RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9
STRING:Q5A7Q9 GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 460 (167.0 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 81/149 (54%), Positives = 112/149 (75%)
Query: 247 NEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSR 306
NED N Y YD R L + V+ GH A+MD+D++PTG+E VTGSYD+TIR+++ GRS+
Sbjct: 281 NEDHNGYLYDMRNLQKTLKVYKGHVGAIMDVDFAPTGQELVTGSYDKTIRLWKTLDGRSK 340
Query: 307 EIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHEAV 366
++YHTKRMQ+VF VK+S D+ Y+ISGSDDTNLR+W++ AS + + R++ K Y + +
Sbjct: 341 DVYHTKRMQKVFSVKYSTDSKYIISGSDDTNLRVWRSDASSRSNIKSSRQRAKLEYQDKL 400
Query: 367 KNRYKHLPEIKRIVRHRHLPKPIYKAASL 395
K RYK++PEI RI RHRHLPKP+ KA +
Sbjct: 401 KERYKYMPEINRIARHRHLPKPVKKAQDM 429
Score = 421 (153.3 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 97/267 (36%), Positives = 144/267 (53%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVK ISRS+D + ++ + N +P L P E+A EY RAL A KLE++FA+PFIG
Sbjct: 1 MKVKTISRSSDTYIPVKNTQESALPRNLNPALHPFERAREYTRALQATKLERMFAQPFIG 60
Query: 61 AL-DGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV-- 117
L DGHRDG+ +AKN SGS DG I+ W++ +R + H G V G+ +
Sbjct: 61 QLGDGHRDGVYFIAKNYQATNQIASGSGDGIIKYWNLTDRLETASFKAHYGMVSGICIYA 120
Query: 118 ------STDGRILV-SCGTD-CTVKLWNVPVATLXXXXXXXXXXXEP------LAVYVWK 163
D I + S +D +K+ N V + + L ++ +
Sbjct: 121 NKMYSCGDDKTIKIWSVNSDDFDIKV-NDDVDGIYRNQLGGAGGGDGKTSGGLLKTFIGE 179
Query: 164 NSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTA 223
+SF +DH + DLF T GA + +W+ NRS+ I+ WG D V +V+FN E N++A++
Sbjct: 180 HSFKGIDHHRDDDLFVTGGATIQLWDVNRSKHISDLSWGADNVGTVKFNQTETNIIASSG 239
Query: 224 SDRSITLYDLRMSSPARKVIMRANEDC 250
SD SI LYD+R ++P KV+ +C
Sbjct: 240 SDNSIVLYDIRTNTPVHKVVTSLRNNC 266
Score = 68 (29.0 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
Identities = 18/75 (24%), Positives = 34/75 (45%)
Query: 286 FVTGSYDRTIRIFQY-NGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
F TG+ D ++ N ++ ++Y + + V F+ +++GS D +RLWK
Sbjct: 277 FATGNEDHNGYLYDMRNLQKTLKVYKG-HVGAIMDVDFAPTGQELVTGSYDKTIRLWKTL 335
Query: 345 ASEQLGVLHPREQRK 359
V H + +K
Sbjct: 336 DGRSKDVYHTKRMQK 350
Score = 48 (22.0 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 171 HQWEGDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSI 228
+Q E ++ A++G+ + +++ + P++ + +NP E AT D +
Sbjct: 228 NQTETNIIASSGSDNSIVLYDIRTNTPVHKVVTSLRNNC-ITWNPMEAFNFATGNEDHNG 286
Query: 229 TLYDLRMSSPARKV 242
LYD+R KV
Sbjct: 287 YLYDMRNLQKTLKV 300
>UNIPROTKB|Q5A7Q9 [details] [associations]
symbol:SOF1 "Putative uncharacterized protein SOF1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005164 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000210082 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717685.1
RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9 STRING:Q5A7Q9
GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 460 (167.0 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 81/149 (54%), Positives = 112/149 (75%)
Query: 247 NEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSR 306
NED N Y YD R L + V+ GH A+MD+D++PTG+E VTGSYD+TIR+++ GRS+
Sbjct: 281 NEDHNGYLYDMRNLQKTLKVYKGHVGAIMDVDFAPTGQELVTGSYDKTIRLWKTLDGRSK 340
Query: 307 EIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHEAV 366
++YHTKRMQ+VF VK+S D+ Y+ISGSDDTNLR+W++ AS + + R++ K Y + +
Sbjct: 341 DVYHTKRMQKVFSVKYSTDSKYIISGSDDTNLRVWRSDASSRSNIKSSRQRAKLEYQDKL 400
Query: 367 KNRYKHLPEIKRIVRHRHLPKPIYKAASL 395
K RYK++PEI RI RHRHLPKP+ KA +
Sbjct: 401 KERYKYMPEINRIARHRHLPKPVKKAQDM 429
Score = 421 (153.3 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 97/267 (36%), Positives = 144/267 (53%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVK ISRS+D + ++ + N +P L P E+A EY RAL A KLE++FA+PFIG
Sbjct: 1 MKVKTISRSSDTYIPVKNTQESALPRNLNPALHPFERAREYTRALQATKLERMFAQPFIG 60
Query: 61 AL-DGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV-- 117
L DGHRDG+ +AKN SGS DG I+ W++ +R + H G V G+ +
Sbjct: 61 QLGDGHRDGVYFIAKNYQATNQIASGSGDGIIKYWNLTDRLETASFKAHYGMVSGICIYA 120
Query: 118 ------STDGRILV-SCGTD-CTVKLWNVPVATLXXXXXXXXXXXEP------LAVYVWK 163
D I + S +D +K+ N V + + L ++ +
Sbjct: 121 NKMYSCGDDKTIKIWSVNSDDFDIKV-NDDVDGIYRNQLGGAGGGDGKTSGGLLKTFIGE 179
Query: 164 NSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTA 223
+SF +DH + DLF T GA + +W+ NRS+ I+ WG D V +V+FN E N++A++
Sbjct: 180 HSFKGIDHHRDDDLFVTGGATIQLWDVNRSKHISDLSWGADNVGTVKFNQTETNIIASSG 239
Query: 224 SDRSITLYDLRMSSPARKVIMRANEDC 250
SD SI LYD+R ++P KV+ +C
Sbjct: 240 SDNSIVLYDIRTNTPVHKVVTSLRNNC 266
Score = 68 (29.0 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
Identities = 18/75 (24%), Positives = 34/75 (45%)
Query: 286 FVTGSYDRTIRIFQY-NGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
F TG+ D ++ N ++ ++Y + + V F+ +++GS D +RLWK
Sbjct: 277 FATGNEDHNGYLYDMRNLQKTLKVYKG-HVGAIMDVDFAPTGQELVTGSYDKTIRLWKTL 335
Query: 345 ASEQLGVLHPREQRK 359
V H + +K
Sbjct: 336 DGRSKDVYHTKRMQK 350
Score = 48 (22.0 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 171 HQWEGDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSI 228
+Q E ++ A++G+ + +++ + P++ + +NP E AT D +
Sbjct: 228 NQTETNIIASSGSDNSIVLYDIRTNTPVHKVVTSLRNNC-ITWNPMEAFNFATGNEDHNG 286
Query: 229 TLYDLRMSSPARKV 242
LYD+R KV
Sbjct: 287 YLYDMRNLQKTLKV 300
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 181/418 (43%), Positives = 253/418 (60%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MK+K +SRST S + R N DP P E+A EY RAL A KLE++FA PF+G
Sbjct: 1 MKIKALSRSTASQQAPGSA-VARQPRNLDPAQHPFERAREYTRALNAVKLERLFAAPFLG 59
Query: 61 AL-DGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
+ +GH DG+ MAK+P L+ F SGS DG +++WD+ + V + H+ V+G+ +
Sbjct: 60 QMGEGHVDGVYTMAKDPGSLERFASGSGDGVVKVWDLVTQGEVWNNTAHENIVKGVCWTP 119
Query: 120 DGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFA 179
D R L+SC D T+KL++ P + PLA Y+ + +F ++ H + FA
Sbjct: 120 D-RKLLSCAADKTIKLFD-PYNS--------SSESPPLATYLGQGAFTSLTHHRDQPFFA 169
Query: 180 TAGAQVDIWNHNR--SQPINSFQWGT--DTVISVRFNPAEPNVLATTASDRSITLYDLRM 235
+ +Q+ I++ +R S P + W T DT+ SV FN E +VLA+T DRSI LYDLR
Sbjct: 170 ASSSQISIYDLSRPSSTPSQTLHWPTSVDTITSVAFNQTETSVLASTGIDRSIILYDLRT 229
Query: 236 SSPARKVIMR------------------ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDI 277
SSP K++++ ANED N Y +D RK++ A V H +AVMD+
Sbjct: 230 SSPLSKLVLKLASNAVSWNPMEAFNFAVANEDHNVYMFDMRKMNRALNVLKDHVAAVMDV 289
Query: 278 DYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTN 337
D+SPTG E VT SYDRTIR++ G SR+IYHT+RMQRVF KF+ D YV+SGSDD N
Sbjct: 290 DFSPTGEELVTASYDRTIRLWNRATGHSRDIYHTQRMQRVFSAKFTPDNKYVLSGSDDGN 349
Query: 338 LRLWKAKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASL 395
+RLW+A AS++ G+ R++ K Y +A+ RY H+PEIKRI R RH+P+ I KA +
Sbjct: 350 IRLWRANASDRSGIKSARQRTKLEYDQALVQRYAHMPEIKRIKRQRHVPRTIKKAREI 407
>UNIPROTKB|Q6NVS5 [details] [associations]
symbol:dcaf13 "DDB1- and CUL4-associated factor 13"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0030529
GO:GO:0006364 GO:GO:0080008 CTD:25879 HOGENOM:HOG000210082
HOVERGEN:HBG056998 KO:K11806 OrthoDB:EOG4T4CVF InterPro:IPR007287
Pfam:PF04158 EMBL:CR855579 EMBL:BC067929 RefSeq:NP_998858.1
UniGene:Str.7604 ProteinModelPortal:Q6NVS5 STRING:Q6NVS5
GeneID:407967 KEGG:xtr:407967 Xenbase:XB-GENE-5791289
InParanoid:Q6NVS5 Uniprot:Q6NVS5
Length = 445
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 180/452 (39%), Positives = 252/452 (55%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVKV+ R+ D++ RE +DLQRV NYDP L P E EY RAL A KLE++FA+PFI
Sbjct: 1 MKVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVPREYTRALNATKLERVFAKPFIA 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LDGHRDG++C+AK+P L SG+ DG++++W++ R H G VRGL V
Sbjct: 61 SLDGHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFC 120
Query: 121 GRILVSCGTDCTVKLWNV----------PVATLXXXXXXXXXXXEPL-AVYVW---KNSF 166
G + G D TVK W++ P+ T+ A++ +
Sbjct: 121 GTSFFTVGDDKTVKQWSMESPGYGEKVEPIRTILGKTVFTGIDHHMNDAIFATCGQQVDI 180
Query: 167 WAVDHQWEGDLFATAGAQVDIWNHNRSQPINSF---QWGTDTVISVRFNPAEPNVLATTA 223
W D Q + + A VD + + PI + GTD I V ++ +P L
Sbjct: 181 W--DEQRSAPMRSYAWG-VDSISSIKFNPIETHILSSCGTDRSI-VLYDKRKPTPLKKII 236
Query: 224 SD-RSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
+ R+ TL M + + ANE+ N Y+YD R +D VHM H SAV+D+DYSPT
Sbjct: 237 LEMRTNTLCWNPMEA---FIFTAANENFNLYTYDMRYMDGPVKVHMDHVSAVLDVDYSPT 293
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
G+EFV+ S+D++IRIF G SRE+YHTKRMQ V CV++S D YV+ GSD+ N+R+WK
Sbjct: 294 GKEFVSASFDKSIRIFPVQSGHSREVYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWK 353
Query: 343 AKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLXXXXXXX 402
A ASE+LG+L PRE+ Y++ +K ++ H P+IKRI RHRHLP+ IY
Sbjct: 354 ANASEKLGLLSPRERAAQNYNQKLKEKFHHHPQIKRIARHRHLPRSIYSQIKEQQIMREA 413
Query: 403 XXXXXXXXXXHSAPGSIVTEPVRKRRIIKEVE 434
HS PGS+ +K+ ++ VE
Sbjct: 414 RRKKDVNRRKHSKPGSVPIPSEKKKHVLAVVE 445
>UNIPROTKB|Q7ZYQ6 [details] [associations]
symbol:dcaf13 "DDB1- and CUL4-associated factor 13"
species:8355 "Xenopus laevis" [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOVERGEN:HBG056998 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:BC042261 RefSeq:NP_001080629.1 UniGene:Xl.21976
ProteinModelPortal:Q7ZYQ6 GeneID:380321 KEGG:xla:380321
Xenbase:XB-GENE-5791341 Uniprot:Q7ZYQ6
Length = 445
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 178/451 (39%), Positives = 248/451 (54%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVKV+ R+ D++ RE +DLQRV NYDP L P E + EY RAL A KLE++FA+PFI
Sbjct: 1 MKVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVSREYTRALNATKLERVFAKPFIA 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LDGHRDG++C+AK+P L SG+ DG++++W++ R H G VRGL V
Sbjct: 61 SLDGHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFC 120
Query: 121 GRILVSCGTDCTVKLWNV----------PVATLXXXXXXXXXXXEPL-AVYVW---KNSF 166
G + G D TVK W + P+ T+ AV+ +
Sbjct: 121 GTSFFTVGDDKTVKQWAMESPGYGEKVEPMRTILGKTVFTGIDHHVKDAVFATCGQQVDI 180
Query: 167 WAVDHQWEGDLFATAGAQVDIWNHNRSQPINSF---QWGTDTVISVRFNPAEPNVLATTA 223
W D Q + + A VD + R P+ + GTD I V ++ +P L
Sbjct: 181 W--DEQRSAPMRSYAWG-VDSISSVRFNPVETHILSSCGTDRSI-VLYDKRKPTPLKKII 236
Query: 224 SDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTG 283
+ L + + ANE+ N Y+YD R +D VHM H SAV+D+DYSPTG
Sbjct: 237 LEMRTNA--LCWNPMEAFIFTAANENFNLYTYDMRYMDSPVKVHMDHVSAVLDVDYSPTG 294
Query: 284 REFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKA 343
+E V+ S+D++IRIF G SRE+YHTKRMQ V CV++S D YV+ GSD+ N+R+WKA
Sbjct: 295 KELVSASFDKSIRIFPVQSGHSREVYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWKA 354
Query: 344 KASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLXXXXXXXX 403
ASE+LGVL PRE+ Y++ +K +++H P+IKRI RHRHLP+ IY
Sbjct: 355 NASEKLGVLSPRERAAQNYNQKLKEKFQHHPQIKRIARHRHLPRSIYSQIKEQQIMREAR 414
Query: 404 XXXXXXXXXHSAPGSIVTEPVRKRRIIKEVE 434
HS PGS+ +K+ ++ VE
Sbjct: 415 RKKDVNRRKHSKPGSVPIPSEKKKHVLAVVE 445
>DICTYBASE|DDB_G0276815 [details] [associations]
symbol:DDB_G0276815 "WD repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 dictyBase:DDB_G0276815 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0016567 GO:GO:0030529
EMBL:AAFI02000019 GO:GO:0006364 GO:GO:0080008 KO:K11806 OMA:CASDRSI
InterPro:IPR007287 Pfam:PF04158 RefSeq:XP_642903.1
ProteinModelPortal:Q7KWL3 STRING:Q7KWL3 EnsemblProtists:DDB0168265
GeneID:8620769 KEGG:ddi:DDB_G0276815 Uniprot:Q7KWL3
Length = 445
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 165/413 (39%), Positives = 241/413 (58%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MK+KVISRS +E T+E++ D+++++ N DPNL P E+ EYVRAL A KL+++FA+PFIG
Sbjct: 1 MKIKVISRSEEEETKEKASDVRKLHRNLDPNLHPFERPREYVRALNATKLDRVFAKPFIG 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIAN--RRTVCQYSGHQGAVRGLTVS 118
+L GH DGI M ++P L SGS DG I+LW++ + RT Q H G VRGL +
Sbjct: 61 SLSGHTDGIFTMTRHPTLLNNVASGSCDGVIKLWNLTSLTERTTVQ--AHNGFVRGLVFT 118
Query: 119 TDGRILVSCGTDCTVKLW--NVPVATLXXXXXXXXXXXEPLAV--YVWKNSFWAVDHQWE 174
DG+ +VSCG D T+K+W ++P T + ++ +A
Sbjct: 119 PDGKHMVSCGEDKTIKMWKLDLPEYTFNQEVISIYNGKNAFTSIDHQLNSTTFATSGPTS 178
Query: 175 GDLFA---TAGAQVDIWNHN-----RSQPINSFQWGT-----DTVI-SVRFN-PAEPNVL 219
+++ + Q W H+ + PI + + D ++ +R N PA+ L
Sbjct: 179 VEIWKHQRSTPIQTLQWGHSTITKVKFNPIETHLLASCTTDRDIILYDIRENSPAQK--L 236
Query: 220 ATTASDRSITLYDLRMSSPARKVIMR-ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDID 278
T+ SI P + ANED N Y YD R L +A VH H +V+DID
Sbjct: 237 TTSMRSNSIAW------CPTESFTLAIANEDENVYQYDIRNLSKAMTVHRDHVGSVLDID 290
Query: 279 YSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNL 338
YSPTGRE V+GSYD+TIRIF + +SRE+Y+T RMQR+F V F+ D+ +++SGSDD N+
Sbjct: 291 YSPTGREIVSGSYDKTIRIFPVDSYKSREVYYTNRMQRIFSVLFTADSRFILSGSDDMNI 350
Query: 339 RLWKAKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYK 391
R+WKA +S LG+L RE+ K Y + +K ++K +PE+K I HR +P+ +YK
Sbjct: 351 RVWKANSSAPLGILSNREKEKLEYQDKIKEKFKEIPELKTIATHRRVPQLVYK 403
>WB|WBGene00022742 [details] [associations]
symbol:ZK430.7 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040039 "inductive cell migration"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0007276 "gamete generation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035 GO:GO:0040039
GO:GO:0007276 GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:FO080155
PIR:T27863 RefSeq:NP_494781.1 ProteinModelPortal:Q23494 SMR:Q23494
STRING:Q23494 PaxDb:Q23494 EnsemblMetazoa:ZK430.7.1
EnsemblMetazoa:ZK430.7.2 GeneID:173778 KEGG:cel:CELE_ZK430.7
UCSC:ZK430.7.1 CTD:173778 WormBase:ZK430.7 InParanoid:Q23494
NextBio:881057 Uniprot:Q23494
Length = 444
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 153/413 (37%), Positives = 237/413 (57%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MK+KVISR+ + + RE + ++ N++ P VEY RAL A KLE++FA+PF+
Sbjct: 1 MKIKVISRNPNTYQRETTDKRNKIVRNFNTPADPFRSQVEYTRALNATKLERVFAKPFVA 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV-ST 119
+LDGH DG+ +AK+PN FSG+ DG +++W++A+R H+G V +++ +
Sbjct: 61 SLDGHVDGVQVLAKHPNRPSTVFSGARDGQVKIWNLASRECQATLDAHRGLVNDISIDNN 120
Query: 120 DGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDH-QWEGDLF 178
+G V+ G D +K W + P + V H + D F
Sbjct: 121 NGENFVTVGQDNQLKYWKIE-----------GQQKTPAHSIAMDGIVYGVSHLSFSSD-F 168
Query: 179 ATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSP 238
T G + +W R P+ S+ GTDT+ + R NP E NV+ SDRSI + D R P
Sbjct: 169 VTCGEDISVWKPYRETPLRSYNLGTDTIHTCRANPVEENVIVGARSDRSIYVLDTRQDVP 228
Query: 239 ARKVIMR------------------ANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYS 280
+KV M+ A+ED + Y++D R ++ H G SAV+D+DYS
Sbjct: 229 LKKVTMKMRPNKISWNPMEAYNFTVASEDYSLYTFDMRYMEHPVQSHQGFTSAVLDVDYS 288
Query: 281 PTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRL 340
PTG+EFV YDR+IR+F+ SR++Y+TKRM V V +S D+ +V+SGS++ N+R+
Sbjct: 289 PTGQEFVAAGYDRSIRLFKARDMTSRDVYYTKRMASVLSVLWSADSKFVLSGSNEMNIRV 348
Query: 341 WKAKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAA 393
WKA A+E+LG L RE++ AY+E +++ YK+ PE++RI +HR++P+ I+ AA
Sbjct: 349 WKANAAEKLGPLTKREKQAFAYNEKLRDTYKNHPEVRRIAKHRNVPRHIFTAA 401
>GENEDB_PFALCIPARUM|PFD0455w [details] [associations]
symbol:PFD0455w "ribosomal processing protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0000154
"rRNA modification" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL844503
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 GO:GO:0000154 GO:GO:0005732 RefSeq:XP_001351406.1
ProteinModelPortal:Q9U0J4 EnsemblProtists:PFD0455w:mRNA
GeneID:812403 KEGG:pfa:PFD0455w EuPathDB:PlasmoDB:PF3D7_0409200
ProtClustDB:CLSZ2433499 Uniprot:Q9U0J4
Length = 482
Score = 364 (133.2 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 71/150 (47%), Positives = 98/150 (65%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
+P + VI ANED N YS+D R L A VH G +AV+D+D+SP G +FV SYD+T+R
Sbjct: 288 NPKQFVI--ANEDSNLYSFDMRYLKTAYLVHKGFVNAVLDVDFSPIGNKFVACSYDKTVR 345
Query: 297 IFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE 356
+F + S ++YHTKRMQ V C KFS DA YV +GS D +LR+WK + E G+L +E
Sbjct: 346 LFNSDEPTSYDVYHTKRMQHVLCCKFSQDAKYVFTGSSDMSLRIWKTISHEPSGILSNKE 405
Query: 357 QRKHAYHEAVKNRYKHLPEIKRIVRHRHLP 386
++ Y +K ++ L EIKRI +H H+P
Sbjct: 406 KQAINYRNKLKEKFASLKEIKRIRQHHHVP 435
Score = 251 (93.4 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 46/136 (33%), Positives = 78/136 (57%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
M++K++ R+ +E+ + + ++D + ++ VEY RAL A K++KIFA+P I
Sbjct: 1 MEIKILHRNPEEYKNNKGTSNYKHVRSFDKKIHLFQREVEYKRALNATKMDKIFAKPLIK 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
LDGH D I + + L +SGS +G I +W++ +++ + + H G VR L +S D
Sbjct: 61 CLDGHDDSIKSICVSNKNLSDLYSGSCNGIINMWNVLDKKLIKKIKAHDGFVRSLCMSYD 120
Query: 121 GRILVSCGTDCTVKLW 136
+ L SCG D +K W
Sbjct: 121 EKFLFSCGDDKYIKQW 136
Score = 140 (54.3 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 26/90 (28%), Positives = 52/90 (57%)
Query: 156 PLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAE 215
P +YV KN ++D + +L + +DIW++ R+ I+SF + + + V+ N ++
Sbjct: 187 PKKIYVCKNVPNSIDKHFSENLIVSGSQTLDIWDYYRNNAISSFDYNNEYIYYVKCNYSQ 246
Query: 216 PNVLATTASDRSITLYDLRMSSPARKVIMR 245
N++ T SD SI + D+R +P +K+ ++
Sbjct: 247 TNLVGLTLSDNSIGIVDIRNKTPIKKLYLK 276
>UNIPROTKB|Q9U0J4 [details] [associations]
symbol:PFD0455w "40S ribosomal processing protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000154
"rRNA modification" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL844503
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 GO:GO:0000154 GO:GO:0005732 RefSeq:XP_001351406.1
ProteinModelPortal:Q9U0J4 EnsemblProtists:PFD0455w:mRNA
GeneID:812403 KEGG:pfa:PFD0455w EuPathDB:PlasmoDB:PF3D7_0409200
ProtClustDB:CLSZ2433499 Uniprot:Q9U0J4
Length = 482
Score = 364 (133.2 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 71/150 (47%), Positives = 98/150 (65%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
+P + VI ANED N YS+D R L A VH G +AV+D+D+SP G +FV SYD+T+R
Sbjct: 288 NPKQFVI--ANEDSNLYSFDMRYLKTAYLVHKGFVNAVLDVDFSPIGNKFVACSYDKTVR 345
Query: 297 IFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE 356
+F + S ++YHTKRMQ V C KFS DA YV +GS D +LR+WK + E G+L +E
Sbjct: 346 LFNSDEPTSYDVYHTKRMQHVLCCKFSQDAKYVFTGSSDMSLRIWKTISHEPSGILSNKE 405
Query: 357 QRKHAYHEAVKNRYKHLPEIKRIVRHRHLP 386
++ Y +K ++ L EIKRI +H H+P
Sbjct: 406 KQAINYRNKLKEKFASLKEIKRIRQHHHVP 435
Score = 251 (93.4 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 46/136 (33%), Positives = 78/136 (57%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
M++K++ R+ +E+ + + ++D + ++ VEY RAL A K++KIFA+P I
Sbjct: 1 MEIKILHRNPEEYKNNKGTSNYKHVRSFDKKIHLFQREVEYKRALNATKMDKIFAKPLIK 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
LDGH D I + + L +SGS +G I +W++ +++ + + H G VR L +S D
Sbjct: 61 CLDGHDDSIKSICVSNKNLSDLYSGSCNGIINMWNVLDKKLIKKIKAHDGFVRSLCMSYD 120
Query: 121 GRILVSCGTDCTVKLW 136
+ L SCG D +K W
Sbjct: 121 EKFLFSCGDDKYIKQW 136
Score = 140 (54.3 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 26/90 (28%), Positives = 52/90 (57%)
Query: 156 PLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAE 215
P +YV KN ++D + +L + +DIW++ R+ I+SF + + + V+ N ++
Sbjct: 187 PKKIYVCKNVPNSIDKHFSENLIVSGSQTLDIWDYYRNNAISSFDYNNEYIYYVKCNYSQ 246
Query: 216 PNVLATTASDRSITLYDLRMSSPARKVIMR 245
N++ T SD SI + D+R +P +K+ ++
Sbjct: 247 TNLVGLTLSDNSIGIVDIRNKTPIKKLYLK 276
>POMBASE|SPBC1A4.07c [details] [associations]
symbol:SPBC1A4.07c "U3 snoRNP-associated protein Sof1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1A4.07c GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 PIR:T39855 RefSeq:NP_595809.1
ProteinModelPortal:O74340 STRING:O74340 EnsemblFungi:SPBC1A4.07c.1
GeneID:2540796 KEGG:spo:SPBC1A4.07c OrthoDB:EOG4GXJWG
NextBio:20801914 Uniprot:O74340
Length = 436
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 165/441 (37%), Positives = 232/441 (52%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVK I+R T TR QD V N DP+L P E+A EY RAL A K++++FA PF+G
Sbjct: 1 MKVKTITRGTS-LTRLNDQD--PVKRNLDPSLHPFERAREYTRALNATKMDRMFAAPFLG 57
Query: 61 ALD-GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
L GH+DG+ +A++ L SGS DG ++LWD + R H+G VRGL S
Sbjct: 58 QLGRGHQDGVYSLARDTKTLIDCASGSGDGAVKLWDASERCERWTSKAHEGIVRGLVFSN 117
Query: 120 DGRILVSCGTDCTVKLWN-----VPVATLXXXXXXXXXXXE--PLAVYVWKN-SFWAVDH 171
G +L SC +D V + N V + L + L +N S W
Sbjct: 118 QGDVL-SCASDRYVYMLNKQDGKVKRSYLGDSSLLDIDTSKGGDLFATSGENVSIWDYSR 176
Query: 172 QWEGDLFATAGAQVDIWNHNRSQPINSFQWGTD-TVISVRFNPAEP-NVLATTASDRSIT 229
F + + N ++ G D +++ + P L T SI+
Sbjct: 177 DTPVTKFEWGADTLPVVKFNYTETSVLASAGMDRSIVIYDLRTSSPLTKLITKLRTNSIS 236
Query: 230 LYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTG 289
+ + + +ED N Y YD R L A V+ H SAVM +D+SPTG+EFV+G
Sbjct: 237 WNPMEAFN-----FVAGSEDHNLYMYDMRNLKRALHVYKDHVSAVMSVDFSPTGQEFVSG 291
Query: 290 SYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
SYD+TIRI+ G SR++YHTKRMQRV VKFS DA Y+ SGSDD+N+RLW+A+AS +
Sbjct: 292 SYDKTIRIYNVREGHSRDVYHTKRMQRVTAVKFSMDAQYIFSGSDDSNVRLWRARASSRA 351
Query: 350 GVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLXXXXXXXXXXXXXX 409
+ RE+ + Y ++++ RYKH+PEI+RI RHRHLP + KAA +
Sbjct: 352 SIRSTREENRLKYLDSLRERYKHIPEIRRIARHRHLPTNVKKAAEIKREEINSLKRREEN 411
Query: 410 XXXHSAPGSIVTEPVRKRRII 430
HS G++ E R+R ++
Sbjct: 412 IRRHSKKGAVPYEKERERHVV 432
>UNIPROTKB|F1MVI8 [details] [associations]
symbol:F1MVI8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 GeneTree:ENSGT00390000005711
EMBL:DAAA02039320 EMBL:DAAA02039321 EMBL:DAAA02039322
IPI:IPI00686597 Ensembl:ENSBTAT00000028594 OMA:ECESHHI
Uniprot:F1MVI8
Length = 449
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 155/458 (33%), Positives = 232/458 (50%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIG 60
MKVK++SR+ D + RE DLQRV NYDP L P E EY+RAL A KLE++FA+PF+
Sbjct: 1 MKVKMLSRNPDHYVRETKLDLQRVPRNYDPTLHPFEVPREYIRALNATKLERVFAKPFLA 60
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LDGHRDG++C+AKNP L SG+ DG++++W++ R+ + H+G VRG+
Sbjct: 61 SLDGHRDGVNCLAKNPKSLATVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGICTRFC 120
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G + G D TVK W + + EPL + K + +DH W +FAT
Sbjct: 121 GTSFFTVGDDKTVKQWKMDGPSCGEEE-------EPLHTILGKTVYTGIDHHWREAVFAT 173
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
G QVDIW+ R+ PI S WG D++ SV+FNP E +L + ASDR+I LYD+R ++P +
Sbjct: 174 CGQQVDIWDEQRTSPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLK 233
Query: 241 KVI--MR----------------ANEDC-NCYSYDSRKL-DEAKCVHMGHESAVMDIDYS 280
KVI MR ANED N S S L D H H S+ I Y
Sbjct: 234 KVILDMRTNTICWNPMEAFIFTAANEDYKNLTSVISMTLIDNPVLFHFKHCSSSCQIKYQ 293
Query: 281 PTGREFVTGSYDRTI---RIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTN 337
R F ++D + I + + R R YHTK+ QRV + F+ + ++ S TN
Sbjct: 294 NVSRAF--SNFDMYVSFKHIPKDSQRRERYNYHTKKHQRVSLLGFALNMHKMLCKSQHTN 351
Query: 338 LR-LWKAKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLX 396
+R + ++G ++ Y+ +K+ + P+++++ H P+
Sbjct: 352 IRGCILQELIFKVGKNSNAVKKLPQYNNTIKHSKRFCPKMQKVAAHITTPECESHHIHKT 411
Query: 397 XXXXXXXXXXXXXXXXHSAPGSIVTEPVRKRRIIKEVE 434
HS PGS+ +K+ ++ V+
Sbjct: 412 KASKLTKVSRELNRIKHSKPGSVQMVSEKKKHVVAVVK 449
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 231 (86.4 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 78/319 (24%), Positives = 138/319 (43%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L+ H + + +P+ K SGS D +++WD A + GH G V L S DG
Sbjct: 746 LENHLGPVESVVFSPDG-KQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
++L S D T+ LW+ L P +S W+V +G A+A
Sbjct: 805 KLLASGSYDNTIDLWDSATGELLQTFEG-----HP-------HSIWSVAFAPDGKELASA 852
Query: 182 G--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
+ + IW+ + + + +V SV F+P + +LA+++ D +I +++
Sbjct: 853 SDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSP-DGKLLASSSLDSTIKVWNPATGELQ 911
Query: 240 RKVIMRAN-EDCNCYSYDSRKL---DEAKCVHM-------------GHESAVMDIDYSPT 282
+ + R+ +S D +KL E V + GH +V + +SP
Sbjct: 912 QSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPD 971
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
G++ + S D TI+++ G ++ + + + V FS D +++SGSDD ++LW
Sbjct: 972 GKQLASSSSDTTIKLWNSTTGELQQTFKGHDLW-IRAVAFSPDGKHLVSGSDDNTIKLWD 1030
Query: 343 AKASEQLGVLHPREQRKHA 361
SE L + HA
Sbjct: 1031 LATSELQQSLEDHSRSVHA 1049
Score = 201 (75.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 79/316 (25%), Positives = 130/316 (41%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
LD H + +A +P+ K S S+D I++W+ A G G V+ + S DG
Sbjct: 872 LDSHSQSVRSVAFSPDG-KLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDG 930
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
+ L S TVKLWN L +A ++ D + +++
Sbjct: 931 KKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVA--------FSPDGKQLAS--SSS 980
Query: 182 GAQVDIWNHNRSQPINSFQWGTDTVI-SVRFNPAEPNVLATTASDRSITLYDLRMS---- 236
+ +WN + +F+ G D I +V F+P + L + + D +I L+DL S
Sbjct: 981 DTTIKLWNSTTGELQQTFK-GHDLWIRAVAFSP-DGKHLVSGSDDNTIKLWDLATSELQQ 1038
Query: 237 --------------SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
SP K + ++ D +DS + + + GH V + +SP
Sbjct: 1039 SLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLE-GHSQGVRSVTFSPD 1097
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
G+ + SYD TI+++ G ++ T R V V FS D + SG D+ ++LW
Sbjct: 1098 GKLLASNSYDGTIKLWNPLTGELQQTL-TGRSDWVDSVAFSPDGKQLASGYYDSTIKLWD 1156
Query: 343 AKASEQLGVLHPREQR 358
+ E L L R
Sbjct: 1157 SATGELLQTLEGHSDR 1172
Score = 193 (73.0 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 77/315 (24%), Positives = 137/315 (43%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L+GH + +A +P+ K S S D I+LW+ + GH +R + S DG
Sbjct: 956 LEGHSQSVRSVAFSPDG-KQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDG 1014
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
+ LVS D T+KLW++ + L +A F D Q ++
Sbjct: 1015 KHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVA-------FSPDDKQLAS---SSL 1064
Query: 182 GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARK 241
+ + +W+ + + + + V SV F+P + +LA+ + D +I L++ +
Sbjct: 1065 DSTIKLWDSATGELQRTLEGHSQGVRSVTFSP-DGKLLASNSYDGTIKLWNPLTGELQQT 1123
Query: 242 VIMRAN-EDCNCYS----------YDSR-KLDEAKCVHM-----GHESAVMDIDYSPTGR 284
+ R++ D +S YDS KL ++ + GH + + +SP G+
Sbjct: 1124 LTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGK 1183
Query: 285 EFVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
+GSYD+T +++ G +I+ H+K ++ V FS D + S S ++LW
Sbjct: 1184 LLASGSYDQTAKLWDPATGELLQIFEGHSKWVESV---AFSPDGKLLASSSYGETIKLWD 1240
Query: 343 AKASEQLGVLH-PRE 356
E L L+ P E
Sbjct: 1241 PVTGELLQTLNDPDE 1255
Score = 148 (57.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 46/174 (26%), Positives = 79/174 (45%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+L+ H + +A +P+ K S S+D I+LWD A GH VR +T S D
Sbjct: 1039 SLEDHSRSVHAVAFSPDD-KQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPD 1097
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G++L S D T+KLWN L W +S V +G A+
Sbjct: 1098 GKLLASNSYDGTIKLWNPLTGELQQTLTGRSD---------WVDS---VAFSPDGKQLAS 1145
Query: 181 A--GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD 232
+ + +W+ + + + + +D + SV F+P + +LA+ + D++ L+D
Sbjct: 1146 GYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSP-DGKLLASGSYDQTAKLWD 1198
Score = 144 (55.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 72/302 (23%), Positives = 118/302 (39%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH I +A +P+ K SGS D I+LWD+A H +V + S D +
Sbjct: 1000 GHDLWIRAVAFSPDG-KHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQ 1058
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXX-----XXEPLAVYVWKNSFWAVDHQWE---G 175
L S D T+KLW+ L P + NS+ W G
Sbjct: 1059 LASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG 1118
Query: 176 DLFATAGAQVDIWNHNRSQPINSFQWGT---DTVISVRFNPAEPNVLATTA--SDRSITL 230
+L T + D W + + + Q + D+ I + ++ A +L T SDR ++
Sbjct: 1119 ELQQTLTGRSD-WVDSVAFSPDGKQLASGYYDSTIKL-WDSATGELLQTLEGHSDRIQSV 1176
Query: 231 YDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGS 290
+ SP K++ + D +D E + GH V + +SP G+ + S
Sbjct: 1177 ----VFSPDGKLLASGSYDQTAKLWDPAT-GELLQIFEGHSKWVESVAFSPDGKLLASSS 1231
Query: 291 YDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLG 350
Y TI+++ G + + + V FS D + + S D + ++W E L
Sbjct: 1232 YGETIKLWDPVTGELLQTLNDPD-ESAGSVAFSPDGNRLAS-VDIFDTKIWDPATGELLQ 1289
Query: 351 VL 352
L
Sbjct: 1290 AL 1291
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 212 (79.7 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 88/344 (25%), Positives = 139/344 (40%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH+D ISC NPN K +GS D + +W++A + ++ GH + G+ + G +
Sbjct: 16 GHKDVISCADFNPNN-KQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSL 74
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAG- 182
+ S D TV+LW + E S +V +G TA
Sbjct: 75 VASSSRDQTVRLWTPSIK------------GESTVFKAHTASVRSVHFSRDGQRLVTASD 122
Query: 183 -AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRM------ 235
V +W R + + S T+ V RF+P + ++A+ DR++ L+D
Sbjct: 123 DKSVKVWGVERKKFLYSLNRHTNWVRCARFSP-DGRLIASCGDDRTVRLWDTSSHQCINI 181
Query: 236 ----SSPARKVIMRANEDCNCYS-YDSR-KLDEA---KCV-HMG-HESAVMDIDYSPTGR 284
A V ++ C S D+ K+ + K + H H + V + P+G
Sbjct: 182 FTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGN 241
Query: 285 EFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
++GS D TI+I GR H + V V FS D SG D+ + +WK
Sbjct: 242 YLISGSSDSTIKILDLLEGRLIYTLHGHKGP-VLTVTFSRDGDLFASGGADSQVLMWKTN 300
Query: 345 ASEQLGVLHPREQ-RKHAYHEAVKNRYKHLPEIKRIVRHRHLPK 387
L+ RE KH+ + HL +I HRH P+
Sbjct: 301 FDS----LNYRELLSKHS-KRVTPDPPPHLMDIYPRSHHRHHPQ 339
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 130 (50.8 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDA 326
+GHES + + + P G F TGS D T R+F + +Y H + + V FS
Sbjct: 123 IGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSG 182
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVLHPREQR 358
+++G DD N +W A ++ GVL + R
Sbjct: 183 RLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNR 214
Score = 116 (45.9 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 39 LPGHTGYLSCCRFLDDNQI---ITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 95
Query: 121 GRILVSCGTDCTVKLWNV 138
GR VS D ++KLW+V
Sbjct: 96 GRTFVSGACDASIKLWDV 113
Score = 86 (35.3 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQ--YSGHQGAVRGLTVSTDG 121
GH + ++ P+ + F SG+ D I+LWD+ R ++C+ + GH+ + + +G
Sbjct: 82 GHSGDVMSLSLAPDG-RTFVSGACDASIKLWDV--RDSMCRQTFIGHESDINAVAFFPNG 138
Query: 122 RILVSCGTDCTVKLWNV 138
+ D T +L+++
Sbjct: 139 YAFTTGSDDATCRLFDL 155
Score = 78 (32.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 198 SFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDS 257
+F G+D F+ L + D I S + ++++ +D NC +D+
Sbjct: 140 AFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDA 199
Query: 258 RKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIF 298
K D A V GH++ V + + G TGS+D ++I+
Sbjct: 200 MKGDRAG-VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
Score = 69 (29.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 247 NEDCNCYSYDSRKLDEAKCVHMGHESAVMDID---YSPTGREFVTGSYDRTIRIFQ-YNG 302
++D C +D R D+ ++ H++ + I +S +GR + G D I+ G
Sbjct: 145 SDDATCRLFDLRA-DQELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKG 202
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R+ + RV C+ + D V +GS D+ L++W
Sbjct: 203 DRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
Score = 57 (25.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 187 IWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRA 246
+W+ Q F + V+S+ P + + A D SI L+D+R S R+ +
Sbjct: 68 LWDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVR-DSMCRQTFIGH 125
Query: 247 NEDCNCYSY 255
D N ++
Sbjct: 126 ESDINAVAF 134
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 130 (50.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDA 326
+GHES + + + P G F TGS D T R+F + +Y H + + V FS
Sbjct: 179 IGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSG 238
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVLHPREQR 358
+++G DD N +W A ++ GVL + R
Sbjct: 239 RLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNR 270
Score = 116 (45.9 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 95 LPGHTGYLSCCRFLDDNQI---ITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 151
Query: 121 GRILVSCGTDCTVKLWNV 138
GR VS D ++KLW+V
Sbjct: 152 GRTFVSGACDASIKLWDV 169
Score = 106 (42.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P GR FV+G+ D +I+++
Sbjct: 113 IITSSGDTTCALWDI-ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 171
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
R+ + + V F + +GSDD RL+ +A ++L
Sbjct: 172 SMCRQTFIGHESD-INAVAFFPNGYAFTTGSDDATCRLFDLRADQEL 217
Score = 86 (35.3 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQ--YSGHQGAVRGLTVSTDG 121
GH + ++ P+ + F SG+ D I+LWD+ R ++C+ + GH+ + + +G
Sbjct: 138 GHSGDVMSLSLAPDG-RTFVSGACDASIKLWDV--RDSMCRQTFIGHESDINAVAFFPNG 194
Query: 122 RILVSCGTDCTVKLWNV 138
+ D T +L+++
Sbjct: 195 YAFTTGSDDATCRLFDL 211
Score = 78 (32.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 198 SFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDS 257
+F G+D F+ L + D I S + ++++ +D NC +D+
Sbjct: 196 AFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDA 255
Query: 258 RKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIF 298
K D A V GH++ V + + G TGS+D ++I+
Sbjct: 256 MKGDRAG-VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 295
Score = 69 (29.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 247 NEDCNCYSYDSRKLDEAKCVHMGHESAVMDID---YSPTGREFVTGSYDRTIRIFQ-YNG 302
++D C +D R D+ ++ H++ + I +S +GR + G D I+ G
Sbjct: 201 SDDATCRLFDLRA-DQELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKG 258
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R+ + RV C+ + D V +GS D+ L++W
Sbjct: 259 DRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 295
Score = 57 (25.1 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 187 IWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRA 246
+W+ Q F + V+S+ P + + A D SI L+D+R S R+ +
Sbjct: 124 LWDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVR-DSMCRQTFIGH 181
Query: 247 NEDCNCYSY 255
D N ++
Sbjct: 182 ESDINAVAF 190
Score = 54 (24.1 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 4 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 39
Score = 38 (18.4 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 12/45 (26%), Positives = 16/45 (35%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCG 128
S S DG + +WD V V + G V+CG
Sbjct: 28 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNF-VACG 71
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 130 (50.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDA 326
+GHES + + + P G F TGS D T R+F + +Y H + + V FS
Sbjct: 223 IGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSG 282
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVLHPREQR 358
+++G DD N +W A ++ GVL + R
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNR 314
Score = 116 (45.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 139 LPGHTGYLSCCRFLDDNQI---ITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
GR VS D ++KLW+V
Sbjct: 196 GRTFVSGACDASIKLWDV 213
Score = 106 (42.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P GR FV+G+ D +I+++
Sbjct: 157 IITSSGDTTCALWDI-ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
R+ + + V F + +GSDD RL+ +A ++L
Sbjct: 216 SMCRQTFIGHESD-INAVAFFPNGYAFTTGSDDATCRLFDLRADQEL 261
Score = 86 (35.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQ--YSGHQGAVRGLTVSTDG 121
GH + ++ P+ + F SG+ D I+LWD+ R ++C+ + GH+ + + +G
Sbjct: 182 GHSGDVMSLSLAPDG-RTFVSGACDASIKLWDV--RDSMCRQTFIGHESDINAVAFFPNG 238
Query: 122 RILVSCGTDCTVKLWNV 138
+ D T +L+++
Sbjct: 239 YAFTTGSDDATCRLFDL 255
Score = 78 (32.5 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 198 SFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDS 257
+F G+D F+ L + D I S + ++++ +D NC +D+
Sbjct: 240 AFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDA 299
Query: 258 RKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIF 298
K D A V GH++ V + + G TGS+D ++I+
Sbjct: 300 MKGDRAG-VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 69 (29.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 247 NEDCNCYSYDSRKLDEAKCVHMGHESAVMDID---YSPTGREFVTGSYDRTIRIFQ-YNG 302
++D C +D R D+ ++ H++ + I +S +GR + G D I+ G
Sbjct: 245 SDDATCRLFDLRA-DQELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKG 302
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R+ + RV C+ + D V +GS D+ L++W
Sbjct: 303 DRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 57 (25.1 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 187 IWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRA 246
+W+ Q F + V+S+ P + + A D SI L+D+R S R+ +
Sbjct: 168 LWDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVR-DSMCRQTFIGH 225
Query: 247 NEDCNCYSY 255
D N ++
Sbjct: 226 ESDINAVAF 234
Score = 54 (24.1 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 38 (18.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 12/45 (26%), Positives = 16/45 (35%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCG 128
S S DG + +WD V V + G V+CG
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNF-VACG 115
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 130 (50.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDA 326
+GHES + + + P G F TGS D T R+F + +Y H + + V FS
Sbjct: 223 IGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSG 282
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVLHPREQR 358
+++G DD N +W A ++ GVL + R
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNR 314
Score = 116 (45.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 139 LPGHTGYLSCCRFLDDNQI---ITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
GR VS D ++KLW+V
Sbjct: 196 GRTFVSGACDASIKLWDV 213
Score = 106 (42.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P GR FV+G+ D +I+++
Sbjct: 157 IITSSGDTTCALWDI-ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
R+ + + V F + +GSDD RL+ +A ++L
Sbjct: 216 SMCRQTFIGHESD-INAVAFFPNGYAFTTGSDDATCRLFDLRADQEL 261
Score = 86 (35.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQ--YSGHQGAVRGLTVSTDG 121
GH + ++ P+ + F SG+ D I+LWD+ R ++C+ + GH+ + + +G
Sbjct: 182 GHSGDVMSLSLAPDG-RTFVSGACDASIKLWDV--RDSMCRQTFIGHESDINAVAFFPNG 238
Query: 122 RILVSCGTDCTVKLWNV 138
+ D T +L+++
Sbjct: 239 YAFTTGSDDATCRLFDL 255
Score = 78 (32.5 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 198 SFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDS 257
+F G+D F+ L + D I S + ++++ +D NC +D+
Sbjct: 240 AFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDA 299
Query: 258 RKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIF 298
K D A V GH++ V + + G TGS+D ++I+
Sbjct: 300 MKGDRAG-VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 69 (29.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 247 NEDCNCYSYDSRKLDEAKCVHMGHESAVMDID---YSPTGREFVTGSYDRTIRIFQ-YNG 302
++D C +D R D+ ++ H++ + I +S +GR + G D I+ G
Sbjct: 245 SDDATCRLFDLRA-DQELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKG 302
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R+ + RV C+ + D V +GS D+ L++W
Sbjct: 303 DRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 57 (25.1 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 187 IWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRA 246
+W+ Q F + V+S+ P + + A D SI L+D+R S R+ +
Sbjct: 168 LWDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVR-DSMCRQTFIGH 225
Query: 247 NEDCNCYSY 255
D N ++
Sbjct: 226 ESDINAVAF 234
Score = 54 (24.1 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 38 (18.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 12/45 (26%), Positives = 16/45 (35%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCG 128
S S DG + +WD V V + G V+CG
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNF-VACG 115
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 130 (50.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDA 326
+GHES + + + P G F TGS D T R+F + +Y H + + V FS
Sbjct: 223 IGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSG 282
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVLHPREQR 358
+++G DD N +W A ++ GVL + R
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNR 314
Score = 116 (45.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 139 LPGHTGYLSCCRFLDDNQI---ITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
GR VS D ++KLW+V
Sbjct: 196 GRTFVSGACDASIKLWDV 213
Score = 106 (42.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P GR FV+G+ D +I+++
Sbjct: 157 IITSSGDTTCALWDI-ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
R+ + + V F + +GSDD RL+ +A ++L
Sbjct: 216 SMCRQTFIGHESD-INAVAFFPNGYAFTTGSDDATCRLFDLRADQEL 261
Score = 86 (35.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQ--YSGHQGAVRGLTVSTDG 121
GH + ++ P+ + F SG+ D I+LWD+ R ++C+ + GH+ + + +G
Sbjct: 182 GHSGDVMSLSLAPDG-RTFVSGACDASIKLWDV--RDSMCRQTFIGHESDINAVAFFPNG 238
Query: 122 RILVSCGTDCTVKLWNV 138
+ D T +L+++
Sbjct: 239 YAFTTGSDDATCRLFDL 255
Score = 78 (32.5 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 198 SFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDS 257
+F G+D F+ L + D I S + ++++ +D NC +D+
Sbjct: 240 AFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDA 299
Query: 258 RKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIF 298
K D A V GH++ V + + G TGS+D ++I+
Sbjct: 300 MKGDRAG-VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 69 (29.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 247 NEDCNCYSYDSRKLDEAKCVHMGHESAVMDID---YSPTGREFVTGSYDRTIRIFQ-YNG 302
++D C +D R D+ ++ H++ + I +S +GR + G D I+ G
Sbjct: 245 SDDATCRLFDLRA-DQELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKG 302
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R+ + RV C+ + D V +GS D+ L++W
Sbjct: 303 DRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 57 (25.1 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 187 IWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRA 246
+W+ Q F + V+S+ P + + A D SI L+D+R S R+ +
Sbjct: 168 LWDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVR-DSMCRQTFIGH 225
Query: 247 NEDCNCYSY 255
D N ++
Sbjct: 226 ESDINAVAF 234
Score = 54 (24.1 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 38 (18.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 12/45 (26%), Positives = 16/45 (35%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCG 128
S S DG + +WD V V + G V+CG
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNF-VACG 115
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 130 (50.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDA 326
+GHES + + + P G F TGS D T R+F + +Y H + + V FS
Sbjct: 223 IGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSG 282
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVLHPREQR 358
+++G DD N +W A ++ GVL + R
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNR 314
Score = 116 (45.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 139 LPGHTGYLSCCRFLDDNQI---ITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
GR VS D ++KLW+V
Sbjct: 196 GRTFVSGACDASIKLWDV 213
Score = 106 (42.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P GR FV+G+ D +I+++
Sbjct: 157 IITSSGDTTCALWDI-ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
R+ + + V F + +GSDD RL+ +A ++L
Sbjct: 216 SMCRQTFIGHESD-INAVAFFPNGYAFTTGSDDATCRLFDLRADQEL 261
Score = 86 (35.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQ--YSGHQGAVRGLTVSTDG 121
GH + ++ P+ + F SG+ D I+LWD+ R ++C+ + GH+ + + +G
Sbjct: 182 GHSGDVMSLSLAPDG-RTFVSGACDASIKLWDV--RDSMCRQTFIGHESDINAVAFFPNG 238
Query: 122 RILVSCGTDCTVKLWNV 138
+ D T +L+++
Sbjct: 239 YAFTTGSDDATCRLFDL 255
Score = 78 (32.5 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 198 SFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDS 257
+F G+D F+ L + D I S + ++++ +D NC +D+
Sbjct: 240 AFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDA 299
Query: 258 RKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIF 298
K D A V GH++ V + + G TGS+D ++I+
Sbjct: 300 MKGDRAG-VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 69 (29.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 247 NEDCNCYSYDSRKLDEAKCVHMGHESAVMDID---YSPTGREFVTGSYDRTIRIFQ-YNG 302
++D C +D R D+ ++ H++ + I +S +GR + G D I+ G
Sbjct: 245 SDDATCRLFDLRA-DQELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKG 302
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R+ + RV C+ + D V +GS D+ L++W
Sbjct: 303 DRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 57 (25.1 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 187 IWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRA 246
+W+ Q F + V+S+ P + + A D SI L+D+R S R+ +
Sbjct: 168 LWDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVR-DSMCRQTFIGH 225
Query: 247 NEDCNCYSY 255
D N ++
Sbjct: 226 ESDINAVAF 234
Score = 54 (24.1 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 38 (18.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 12/45 (26%), Positives = 16/45 (35%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCG 128
S S DG + +WD V V + G V+CG
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNF-VACG 115
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 130 (50.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDA 326
+GHES + + + P G F TGS D T R+F + +Y H + + V FS
Sbjct: 223 IGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSG 282
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVLHPREQR 358
+++G DD N +W A ++ GVL + R
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNR 314
Score = 116 (45.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 139 LPGHTGYLSCCRFLDDNQI---ITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
GR VS D ++KLW+V
Sbjct: 196 GRTFVSGACDASIKLWDV 213
Score = 106 (42.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P GR FV+G+ D +I+++
Sbjct: 157 IITSSGDTTCALWDI-ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
R+ + + V F + +GSDD RL+ +A ++L
Sbjct: 216 SMCRQTFIGHESD-INAVAFFPNGYAFTTGSDDATCRLFDLRADQEL 261
Score = 86 (35.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQ--YSGHQGAVRGLTVSTDG 121
GH + ++ P+ + F SG+ D I+LWD+ R ++C+ + GH+ + + +G
Sbjct: 182 GHSGDVMSLSLAPDG-RTFVSGACDASIKLWDV--RDSMCRQTFIGHESDINAVAFFPNG 238
Query: 122 RILVSCGTDCTVKLWNV 138
+ D T +L+++
Sbjct: 239 YAFTTGSDDATCRLFDL 255
Score = 78 (32.5 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 198 SFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDS 257
+F G+D F+ L + D I S + ++++ +D NC +D+
Sbjct: 240 AFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDA 299
Query: 258 RKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIF 298
K D A V GH++ V + + G TGS+D ++I+
Sbjct: 300 MKGDRAG-VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 69 (29.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 247 NEDCNCYSYDSRKLDEAKCVHMGHESAVMDID---YSPTGREFVTGSYDRTIRIFQ-YNG 302
++D C +D R D+ ++ H++ + I +S +GR + G D I+ G
Sbjct: 245 SDDATCRLFDLRA-DQELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKG 302
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R+ + RV C+ + D V +GS D+ L++W
Sbjct: 303 DRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 57 (25.1 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 187 IWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRA 246
+W+ Q F + V+S+ P + + A D SI L+D+R S R+ +
Sbjct: 168 LWDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVR-DSMCRQTFIGH 225
Query: 247 NEDCNCYSY 255
D N ++
Sbjct: 226 ESDINAVAF 234
Score = 54 (24.1 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 38 (18.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 12/45 (26%), Positives = 16/45 (35%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCG 128
S S DG + +WD V V + G V+CG
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNF-VACG 115
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 200 (75.5 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 77/316 (24%), Positives = 131/316 (41%)
Query: 50 LEKIFARPFIGA-LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVC-QYSG 107
++ +F P + GH GI+ + P+ + + S D + LW++ N+ C +++
Sbjct: 1 MQGLFRDPALERHFTGHSGGITQLRFGPDGAQ-IATSSTDSTVILWNL-NQAARCIRFAS 58
Query: 108 HQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFW 167
H V G+ S G ++ S G D TVK+W + +
Sbjct: 59 HSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVR------------ 106
Query: 168 AVDHQWEGDLFATAG--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASD 225
+VD G L TA IW R Q ++SF + V S +F+P ++AT + D
Sbjct: 107 SVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSP-NGKLVATASDD 165
Query: 226 RSITLYDL-----------RMSSPARKV------IMRANEDCNCYSYDSRKLDEAKCVHM 268
+S+ +YD+ ++P + ++ CN + +++
Sbjct: 166 KSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYV 225
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYH-TKRMQRVFCVKFSCDAS 327
H + V D+ + P+G ++GS DRTIRI GR IY T V V FS D
Sbjct: 226 VHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRP--IYTLTGHTDAVNAVAFSRDGD 283
Query: 328 YVISGSDDTNLRLWKA 343
+G D L +W++
Sbjct: 284 KFATGGSDRQLLVWQS 299
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 128 (50.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GHRD ++C+ + N K SGSMD + +W + + +++GH+ AV + S G +
Sbjct: 17 GHRDAVTCVDFSLN-TKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 124 LVSCGTDCTVKLWNVP 139
L S D TV++W VP
Sbjct: 76 LASGSRDKTVRIW-VP 90
Score = 119 (46.9 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYH-TKRMQRVFCVKFSC 324
V H + V + + G+ VT S D+T++++ + R R ++ T+ + V C KFS
Sbjct: 98 VFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTH--RQRFLFSLTQHINWVRCAKFSP 155
Query: 325 DASYVISGSDDTNLRLWKAKASE 347
D ++S SDD ++LW + E
Sbjct: 156 DGRLIVSASDDKTVKLWDKTSRE 178
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 41/153 (26%), Positives = 66/153 (43%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATL 143
+ S D +++W +R + + H VR S DGR++VS D TVKLW+
Sbjct: 120 TASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD------ 173
Query: 144 XXXXXXXXXXXEPLAVYVWKNSFWA-VDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQ 200
E + Y F VD G A AG V +W+ + + +Q
Sbjct: 174 -------KTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQ 226
Query: 201 WGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
+ V ++ F+P+ N L T +SD ++ + DL
Sbjct: 227 LHSAAVNALSFHPSG-NYLITASSDSTLKILDL 258
Score = 115 (45.5 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 64 GHRDGISCMAKNPN-YLKGFFSGSMDGDIRLW--DIANRRTVCQYSGHQGAVRGLTVSTD 120
GH+D ++C+ +P+ +L SGS D +R+W ++ TV + H VR + +D
Sbjct: 59 GHKDAVTCVNFSPSGHLLA--SGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSD 114
Query: 121 GRILVSCGTDCTVKLWN 137
G+ LV+ D TVK+W+
Sbjct: 115 GQSLVTASDDKTVKVWS 131
Score = 100 (40.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 58 FIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
F+ +L H + + C +P+ + S S D ++LWD +R + Y H G V +
Sbjct: 137 FLFSLTQHINWVRCAKFSPDG-RLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDF 195
Query: 118 STDGRILVSCGTDCTVKLWN 137
G + + G D TVK+W+
Sbjct: 196 HPSGTCIAAAGMDNTVKVWD 215
Score = 94 (38.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 237 SPARKVIMRANEDCNCYSYD--SRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
SP ++I+ A++D +D SR+ + C H G V +D+ P+G D T
Sbjct: 154 SPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGF---VTYVDFHPSGTCIAAAGMDNT 210
Query: 295 IRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLH 353
++++ R + Y V + F +Y+I+ S D+ L++ L LH
Sbjct: 211 VKVWDARTHRLLQHYQL-HSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLH 268
Score = 93 (37.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H +AV + + P+G +T S D T++I GR H + V FS Y
Sbjct: 228 HSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPAT-TVAFSRTGEYF 286
Query: 330 ISGSDDTNLRLWKA 343
SG D + +WK+
Sbjct: 287 ASGGSDEQVMVWKS 300
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 197 (74.4 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 76/293 (25%), Positives = 125/293 (42%)
Query: 57 PFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLT 116
P + L+GH D I + +P+ + SGS D I+LWD A+ GH +V+ +
Sbjct: 32 PELQTLEGHSDWIETVTFSPDG-RLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVA 90
Query: 117 VSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAV----YVWKNSFWAVDHQ 172
S +G++L S +D T+KLWN +L E +A +W + ++ H
Sbjct: 91 FSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHT 150
Query: 173 WEG--DLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITL 230
EG D + D Q + S + I + ++ A L T S +
Sbjct: 151 IEGHSDWVLSVAFSPD------GQLLAS--GSAEKTIKL-WDSATCG-LKHTLGGHSNWV 200
Query: 231 YDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGS 290
L + SP +++ + D +D K GH + + + +SP G+ +GS
Sbjct: 201 LPL-VFSPDGRLLASGSNDATIKLWDPPS-GSLKHTLEGHSNKIESLAFSPNGQLLASGS 258
Query: 291 YDRTIRIFQYNGGRSREIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLW 341
D TI+++ G R HT + V V FS D+ + SGS D ++LW
Sbjct: 259 SDATIKLWDTATGSFR---HTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLW 308
Score = 156 (60.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 53/182 (29%), Positives = 82/182 (45%)
Query: 57 PFIGAL----DGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAV 112
P IG+L +GH D + +A +P+ + SGS + I+LWD A GH V
Sbjct: 142 PAIGSLKHTIEGHSDWVLSVAFSPDG-QLLASGSAEKTIKLWDSATCGLKHTLGGHSNWV 200
Query: 113 RGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQ 172
L S DGR+L S D T+KLW+ P +L E LA
Sbjct: 201 LPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSP----------- 249
Query: 173 WEGDLFATAG--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITL 230
G L A+ A + +W+ ++ + +D V+SV F+P + +L + + D +I L
Sbjct: 250 -NGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSP-DSQLLESGSGDNTIKL 307
Query: 231 YD 232
+D
Sbjct: 308 WD 309
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 188 (71.2 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 71/300 (23%), Positives = 123/300 (41%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GHRD ++C+ + N K SGSMD + +W + + +++GH+ AV + S G +
Sbjct: 17 GHRDAVTCVDFSLN-TKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA 183
L S D TV++W VP E + +V +G L TA
Sbjct: 76 LASGSRDKTVRIW-VP-----------NVKGESTVFRAHTATVRSVHFCSDGQLLVTASD 123
Query: 184 Q--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSS---- 237
V +W+ +R + + S + V +F+P + ++ + + D+++ L+D
Sbjct: 124 DKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHS 182
Query: 238 --------------PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTG 283
P+ I A D +D+R + + H +AV + + P+G
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQL-HSAAVNALSFHPSG 241
Query: 284 REFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKA 343
+T S D T++I GR H + V FS Y SG D + +WK+
Sbjct: 242 NYLITASSDSTLKILDLMEGRLLYTLHGHQGPAT-TVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 124 (48.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 56/260 (21%), Positives = 111/260 (42%)
Query: 64 GHRDGISCMAKNPN-YLKGFFSGSMDGDIRLW--DIANRRTVCQYSGHQGAVRGLTVSTD 120
GH+D ++C+ +P+ +L SGS D +R+W ++ TV + H VR + +D
Sbjct: 59 GHKDAVTCVNFSPSGHLLA--SGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSD 114
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYV-W-KNSFWAVDHQWEGDLF 178
G++LV+ D TVK+W+ L ++ W + + ++ D + +
Sbjct: 115 GQLLVTASDDKTVKVWSTHRQRFLFS----------LTQHINWVRCAKFSPDGRLI--VS 162
Query: 179 ATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLAT----------TASDRSI 228
A+ V +W+ + ++S+ V V F+P+ + A T + R +
Sbjct: 163 ASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLV 222
Query: 229 TLYDLRMSS-------PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSP 281
Y L ++ P+ ++ A+ D D + +H GH+ + +S
Sbjct: 223 QHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLH-GHQGPATTVAFSR 281
Query: 282 TGREFVTGSYDRTIRIFQYN 301
TG F +G D + +++ N
Sbjct: 282 TGEYFASGGSDEQVMVWKSN 301
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYH-TKRMQRVFCVKFSC 324
V H + V + + G+ VT S D+T++++ + R R ++ T+ + V C KFS
Sbjct: 98 VFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTH--RQRFLFSLTQHINWVRCAKFSP 155
Query: 325 DASYVISGSDDTNLRLWKAKASE 347
D ++S SDD ++LW + E
Sbjct: 156 DGRLIVSASDDKTVKLWDKTSRE 178
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 188 (71.2 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 67/305 (21%), Positives = 124/305 (40%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
+ L+GHR+ + +A N Y +GS D +LW + + + GH + L+ +
Sbjct: 127 LNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFN 186
Query: 119 TDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLF 178
++ + D T KLW++ E +++ SF GD
Sbjct: 187 PQSTLVATGSMDTTAKLWDIQNGE--EVYTLRGHSAEIISL-----SF-----NTSGDRI 234
Query: 179 ATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMS 236
T V +W+ + + +N + S FN + +++ T + D++ L+D
Sbjct: 235 ITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFN-WDCSLILTGSMDKTCKLWDATNG 293
Query: 237 SPARKVIMRANEDCN-CYSYDSRKLDEA--------------KCVHM--GHESAVMDIDY 279
+ +E + C+ Y + + A KC+ GHE + I +
Sbjct: 294 KCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISF 353
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTN 337
+P G +TGS D+T RI+ G+ ++ HT +F F+ + VI+GS D
Sbjct: 354 NPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHT---DEIFSCAFNYKGNIVITGSKDNT 410
Query: 338 LRLWK 342
R+W+
Sbjct: 411 CRIWR 415
Score = 156 (60.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 70/293 (23%), Positives = 127/293 (43%)
Query: 82 FFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGT-DCTVKLWNVPV 140
F +GS D +LWD A+ + GH+ V + + ++ G+ D T KLW+V
Sbjct: 107 FITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET 166
Query: 141 ATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQ 200
L+ + +++ A G + TA +W+ + + + +
Sbjct: 167 GKCYHTFRGHTAEIVCLS-FNPQSTLVAT-----GSMDTTA----KLWDIQNGEEVYTLR 216
Query: 201 WGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKV---------IMRA--NED 249
+ +IS+ FN + ++ T + D ++ ++D + RKV I A N D
Sbjct: 217 GHSAEIISLSFNTSGDRII-TGSFDHTVVVWD---ADTGRKVNILIGHCAEISSASFNWD 272
Query: 250 CNCY---SYDSR-KLDEA---KCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQY 300
C+ S D KL +A KCV GH+ ++D + TG+ T S D T RIF
Sbjct: 273 CSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIF-- 330
Query: 301 NGGRSREIYHTKRMQ-RVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVL 352
+ + I + + + + F+ +++++GS D R+W A+ + L VL
Sbjct: 331 SAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVL 383
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 121 (47.7 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 30/112 (26%), Positives = 51/112 (45%)
Query: 241 KVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQY 300
K + A++D +D K +C+ GH + V ID++P G V+GS+D T+RI+
Sbjct: 109 KYLASASDDKTIRIWDFEKRCSVRCLK-GHTNYVSSIDFNPLGTLLVSGSWDETVRIWNL 167
Query: 301 NGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVL 352
G + + + V S D + + S D R+W + + L L
Sbjct: 168 QDGTCLRMLPA-HSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTL 218
Score = 112 (44.5 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GH ++C++ +PN + + S DG I++W R C GH + + +T
Sbjct: 50 LFGHEKSVTCVSVSPNK-RWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGS 108
Query: 122 RILVSCGTDCTVKLWN 137
+ L S D T+++W+
Sbjct: 109 KYLASASDDKTIRIWD 124
Score = 67 (28.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 18/84 (21%), Positives = 37/84 (44%)
Query: 260 LDEAKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRV 317
L + C+ M H ++ + S G T SYD RI+ G+ + +
Sbjct: 167 LQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPL 226
Query: 318 FCVKFSCDASYVISGSDDTNLRLW 341
++F+ + Y++ + ++ +RLW
Sbjct: 227 SNLQFTENRKYLLVSNLNSQIRLW 250
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 139 (54.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 56/288 (19%), Positives = 111/288 (38%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GHR+ I+ + +P++ S S D I++WD + GH AV+ + G
Sbjct: 102 LTGHRNCINSVKFHPSFSL-MVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTG 160
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
+L SC D T+KLW+ ++ ++ V GD ++
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKT------------LHGHDHNVSCVRFTPSGDQLISS 208
Query: 182 GAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
+ +W I + D V + + + + +A+ ++D++I +++ +
Sbjct: 209 SRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSE-DGSCIASCSNDQTIKTWNI-VKGEC 266
Query: 240 RKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGR------EFVTGSYDR 293
+ C ++ + + + + + P G TGS D+
Sbjct: 267 LATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDK 326
Query: 294 TIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
TI+I++ GR Y V V+F +++S DD +R+W
Sbjct: 327 TIKIWELATGRCLATY-IGHDNWVRAVRFHPCGKFLLSVGDDKTIRVW 373
Score = 138 (53.6 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
+ L GH +SC+ P+ + S S D I++W+ A + GH+ VR +TVS
Sbjct: 183 VKTLHGHDHNVSCVRFTPSGDQ-LISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVS 241
Query: 119 TDGRILVSCGTDCTVKLWNV 138
DG + SC D T+K WN+
Sbjct: 242 EDGSCIASCSNDQTIKTWNI 261
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRI 297
P+ +++ A+ED +D E + GH +AV DID+ TG + S D TI++
Sbjct: 116 PSFSLMVSASEDATIKVWDFES-GEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKL 174
Query: 298 FQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKA 343
+ + + H V CV+F+ +IS S D +++W+A
Sbjct: 175 WDFQTYDCVKTLHGHD-HNVSCVRFTPSGDQLISSSRDKTIKVWEA 219
Score = 94 (38.1 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 19/86 (22%), Positives = 44/86 (51%)
Query: 259 KLDEAKCV--HMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQR 316
+L +C+ ++GH++ V + + P G+ ++ D+TIR++ GR + +
Sbjct: 332 ELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHF 391
Query: 317 VFCVKFSCDASYVISGSDDTNLRLWK 342
+ C+ F ++ +G D +++WK
Sbjct: 392 ISCLDFCLHNPHIATGGVDDVIKVWK 417
Score = 75 (31.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 25/81 (30%), Positives = 34/81 (41%)
Query: 58 FIGALDGHRDGISCMA--KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGL 115
F L GH + + + K N L S S D I+LWD V GH V +
Sbjct: 140 FERTLKGHTNAVQDIDFDKTGNLLA---SCSADLTIKLWDFQTYDCVKTLHGHDHNVSCV 196
Query: 116 TVSTDGRILVSCGTDCTVKLW 136
+ G L+S D T+K+W
Sbjct: 197 RFTPSGDQLISSSRDKTIKVW 217
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/62 (17%), Positives = 25/62 (40%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRI 297
P K ++ +D +D + K ++ H + +D+ TG D I++
Sbjct: 356 PCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKV 415
Query: 298 FQ 299
++
Sbjct: 416 WK 417
Score = 40 (19.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 328 YVISGSDDTNLRLWKAKASEQLGVL--HPREQRKHAYHEAVK 367
Y+ +GS D +++W+ L H R +H K
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGK 359
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 183 (69.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 70/300 (23%), Positives = 123/300 (41%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GHRD ++C+ + N +K SGSMD + +W + + +++GH+ AV + S G +
Sbjct: 48 GHRDAVTCVDFSFN-MKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 106
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA 183
L S D TV++W VP E + +V +G F TA
Sbjct: 107 LASGSRDKTVRIW-VP-----------NIKGESTVFRAHTATVRSVHFCSDGQSFVTASD 154
Query: 184 Q--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSS---- 237
+ +W+ +R + + S + V +F+P + ++ + + D+++ L+D
Sbjct: 155 DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHS 213
Query: 238 --------------PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTG 283
P+ + A D +D R + + H +AV + + P+G
Sbjct: 214 YCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQL-HSAAVNALSFHPSG 272
Query: 284 REFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKA 343
VT S D T++I GR H + V FS Y SG D + +WK+
Sbjct: 273 NYLVTASSDSTLKILDLMEGRLLYTLHGHQGPAT-TVAFSRTGEYFASGGSDEQVMVWKS 331
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYH-TKRMQRVFCVKFSC 324
V H + V + + G+ FVT S D+TI+++ + R + ++ ++ + V C KFS
Sbjct: 129 VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH--RQKFLFSLSQHINWVRCAKFSP 186
Query: 325 DASYVISGSDDTNLRLWKAKASE 347
D ++S SDD ++LW + E
Sbjct: 187 DGRLIVSASDDKTVKLWDKTSRE 209
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 185 (70.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 68/304 (22%), Positives = 131/304 (43%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQ-YSGHQGAVRGLT- 116
I + GH + +SC+A P+ +GSMD IR WD + H + L
Sbjct: 170 IATMKGHTNWVSCVAWAPD-ASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCW 228
Query: 117 ----VSTD-GRILVSCGT-DCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVD 170
++ D G L++ G+ D TV++WNV + TL P+ W W
Sbjct: 229 QPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTA---PITCVRWGGQNWIYS 285
Query: 171 HQWEGDLF---ATAGAQVDIWNHNRSQPINSFQWGTDTVI-SVRFNPAEPNVLATTASDR 226
++ + A G + I + ++ +N T+ V+ S ++ + + + R
Sbjct: 286 SSYDKTIRIWDAKDGKCLHILKGHAAR-VNHLSLSTEHVLRSGAYDHTDFKPKSFSDERR 344
Query: 227 SIT-LYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGRE 285
Y+ + +++ A++D +D +K + GH+ V +SP GR
Sbjct: 345 KAKERYEACLKQSGERLVS-ASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRC 403
Query: 286 FVTGSYDRTIRIFQYNGGRSREIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKA 343
T S+D ++R++ G++ + T R + V+ +S D+ ++S S DT L++W
Sbjct: 404 IATASFDSSVRLWD---GKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDV 460
Query: 344 KASE 347
++ +
Sbjct: 461 RSKK 464
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 141 (54.7 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 43/165 (26%), Positives = 75/165 (45%)
Query: 71 CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTD 130
C + + NYL +G+ D +++WDI ++ + GH+ + L S+DGR +VS D
Sbjct: 334 CFSPDGNYLA---TGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGD 390
Query: 131 CTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIW 188
K+W++ P KN +V +G L A V +W
Sbjct: 391 KKAKIWDIEKGKCAFTLGNEEVG--P------KNGVTSVAMSPDGRLVAAGSLDNIVRLW 442
Query: 189 NHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
+ + ++ D+V SV F+P + LA+ + D+S+ L+DL
Sbjct: 443 DAQTGYFLERYEGHLDSVYSVAFSP-DGKSLASGSLDKSLKLWDL 486
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 44/173 (25%), Positives = 78/173 (45%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
G ++G++ +A +P+ + +GS+D +RLWD + +Y GH +V + S DG+
Sbjct: 413 GPKNGVTSVAMSPDG-RLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKS 471
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA 183
L S D ++KLW++ + + + V +F + D W + +
Sbjct: 472 LASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSV---AF-SPDGSWL--ISGSKDR 525
Query: 184 QVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPN--VLATTASD-RS-ITLYD 232
V W+ Q ++VISV +P + V AT + D RS + YD
Sbjct: 526 SVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWKYD 578
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK---RMQRVFCVKFSCD 325
GH +V + +SP G+ +GS D++++++ +G RSR V V FS D
Sbjct: 455 GHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPD 514
Query: 326 ASYVISGSDDTNLRLW 341
S++ISGS D +++ W
Sbjct: 515 GSWLISGSKDRSVQFW 530
Score = 121 (47.7 bits), Expect = 0.00033, P = 0.00033
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 58 FIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTV--CQ--YSGHQGAVR 113
F+ +GH D + +A +P+ K SGS+D ++LWD++ R+ C+ ++GH+ V
Sbjct: 449 FLERYEGHLDSVYSVAFSPDG-KSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVL 507
Query: 114 GLTVSTDGRILVSCGTDCTVKLWN 137
+ S DG L+S D +V+ W+
Sbjct: 508 SVAFSPDGSWLISGSKDRSVQFWD 531
Score = 91 (37.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 237 SPARKVIMRANEDCNCYSYD---SRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDR 293
SP K + + D + +D SR + GH+ V+ + +SP G ++GS DR
Sbjct: 466 SPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDR 525
Query: 294 TIRIFQYNGGRSREIYHTKRMQRVFCVKFSC-DASYVI--SGSDDTNLRLWK 342
+++ + G + + + V V S + S+ + +GS D RLWK
Sbjct: 526 SVQFWDPRNGTTHMMLQGHK-NSVISVALSPKNNSHGVFATGSGDFRSRLWK 576
Score = 59 (25.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGRE---FVTGSYDR 293
SP ++ ++D + +D R + GH+++V+ + SP F TGS D
Sbjct: 512 SPDGSWLISGSKDRSVQFWDPRN-GTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDF 570
Query: 294 TIRIFQYN 301
R+++Y+
Sbjct: 571 RSRLWKYD 578
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 182 (69.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 71/299 (23%), Positives = 124/299 (41%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GHRD I+ + +P+ K SGS+D + +W++ + +++GH+ AV + S +
Sbjct: 16 GHRDAITSLDFSPSG-KQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHL 74
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAG- 182
L S D TV+LW VP E + S +V +G TA
Sbjct: 75 LASSSRDKTVRLW-VP-----------SVKGESVLFRAHTGSVRSVCFSADGQSLLTASD 122
Query: 183 -AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRM------ 235
+ +W+ +R + I + + + V RF+P + ++ + + DR++ L+D
Sbjct: 123 DQSIKLWSVHRQKIICTLREHNNWVRCARFSP-DGQLMVSVSDDRTVKLWDASSRQLIHT 181
Query: 236 -------SS-----PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTG 283
SS P+ I A+ D +D R + + H +AV + + P+G
Sbjct: 182 FCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQV-HSAAVNALSFHPSG 240
Query: 284 REFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
+T S D T++I GR H + CV FS S D + +W+
Sbjct: 241 NHLLTASSDSTLKILDLLEGRLLYTLHGHQGS-ASCVSFSRSGDQFASAGSDQQVMVWR 298
Score = 138 (53.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 57/260 (21%), Positives = 118/260 (45%)
Query: 64 GHRDGISCMAKNPN-YLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR 122
GH+D ++C+ +P+ +L S S D +RLW + + + H G+VR + S DG+
Sbjct: 58 GHKDAVTCVQFSPSAHLLA--SSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQ 115
Query: 123 ILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQW--EGDLFAT 180
L++ D ++KLW+V + + + +++ W ++ +G L +
Sbjct: 116 SLLTASDDQSIKLWSV--------------HRQKIICTLREHNNWVRCARFSPDGQLMVS 161
Query: 181 AGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLR---- 234
V +W+ + Q I++F V F+P+ +AT +SD ++ ++D+R
Sbjct: 162 VSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSS-TCIATASSDNTVRVWDIRTHTL 220
Query: 235 -----MSSPARKVIM---RANEDCNCYSYDSRK-LD--EAKCVHM--GHESAVMDIDYSP 281
+ S A + N S + K LD E + ++ GH+ + + +S
Sbjct: 221 LQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSR 280
Query: 282 TGREFVTGSYDRTIRIFQYN 301
+G +F + D+ + +++ N
Sbjct: 281 SGDQFASAGSDQQVMVWRTN 300
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 178 (67.7 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 77/312 (24%), Positives = 126/312 (40%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANR-RTVCQYSGHQGAVRGLTVSTDGR 122
GHRD I+ + + N K SGSMD +++W + + R C GH+ AV + S G
Sbjct: 18 GHRDAITSVDFSLNK-KQLASGSMDSCLKIWSMKPQMRAYCLV-GHKDAVMCVQFSPSGH 75
Query: 123 ILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAG 182
++ S D TV LW VP E + +V +G TA
Sbjct: 76 LVASGSRDKTVCLW-VP-----------SVKGESTVFKAHTATVRSVHFSSDGQSLVTAS 123
Query: 183 AQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSS--- 237
+ +W +R + + S + V RF+P + ++A+ + D+++ L+D
Sbjct: 124 DDKTIKVWTVHRQKFLFSLSQHINWVRCARFSP-DGRLIASASDDKTVKLWDKTSRECIH 182
Query: 238 ---------------PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
P+ I A D +D R ++ + H +AV + + P+
Sbjct: 183 SFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVR-MNRLLQHYQVHTAAVNSLSFHPS 241
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
G +T S D T++I GR H + CV FS + SG D + +WK
Sbjct: 242 GNYLITASNDSTLKILDLLEGRLLYTLHGHQGPAT-CVAFSRTGDFFASGGSDEQVMVWK 300
Query: 343 AK--ASEQLGVL 352
A++ GVL
Sbjct: 301 TNFSAADYDGVL 312
Score = 116 (45.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 62 LDGHRDGISCMAKNPN-YLKGFFSGSMDGDIRLW--DIANRRTVCQYSGHQGAVRGLTVS 118
L GH+D + C+ +P+ +L SGS D + LW + TV + H VR + S
Sbjct: 58 LVGHKDAVMCVQFSPSGHLVA--SGSRDKTVCLWVPSVKGESTV--FKAHTATVRSVHFS 113
Query: 119 TDGRILVSCGTDCTVKLWNV 138
+DG+ LV+ D T+K+W V
Sbjct: 114 SDGQSLVTASDDKTIKVWTV 133
Score = 89 (36.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 237 SPARKVIMRANEDCNCYSYD--SRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
SP ++I A++D +D SR+ + C H G + V ++ P+G D+T
Sbjct: 155 SPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHV---EFHPSGTCIAAAGTDKT 211
Query: 295 IRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLH 353
++++ R + Y V + F +Y+I+ S+D+ L++ L LH
Sbjct: 212 VKVWDVRMNRLLQHYQV-HTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLH 269
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 181 (68.8 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 72/304 (23%), Positives = 124/304 (40%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L+GHR+ + +A N Y +GS D +LW + + GH + L+ +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 122 RILVSCGTDCTVKLWNVP----VATLXXXXXXXXXXX-EPLAVYVWKNSFWAVDHQ---W 173
++ + D T KLW++ V TL + + SF DH W
Sbjct: 190 TVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSF---DHTVVVW 246
Query: 174 EGDLFATAGAQVD-IWNHNRSQPINSFQWGTDTVIS-------VRFNPAEPNVLAT-TAS 224
+ A+ G +V + H F W +++ + ++ +AT T
Sbjct: 247 D----ASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGH 302
Query: 225 DRSI--TLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHM--GHESAVMDIDYS 280
D I + +D K+I A+ D Y++ KC+ GHE + I ++
Sbjct: 303 DDEILDSCFDY-----TGKLIATASADGTARVYNATT---RKCITKLEGHEGEISKISFN 354
Query: 281 PTGREFVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTNL 338
P G +TGS D+T RI+ G+ ++ HT +F F+ + VI+GS D +
Sbjct: 355 PQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHT---DEIFSCAFNYKGNIVITGSKDNSC 411
Query: 339 RLWK 342
R+W+
Sbjct: 412 RIWR 415
Score = 135 (52.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 63/288 (21%), Positives = 116/288 (40%)
Query: 82 FFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGT-DCTVKLWNVPV 140
F +GS D ++WD A+ + GH+ V + + ++ G+ D T KLW+
Sbjct: 107 FITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAET 166
Query: 141 ATLXXXXXXXXX-----XXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQP 195
P + V S W+ +G +V + ++
Sbjct: 167 GKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWD----IQSGEEVVTLTGHLAEI 222
Query: 196 IN-SFQWGTDTVISVRFNPAEPNVLATTASDRSI-TL--YDLRMSSPARK----VIMRAN 247
I+ SF D +I+ F+ V+ ++ R + TL + +SS +I+ +
Sbjct: 223 ISLSFDTSGDRIITGSFDHTV--VVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGS 280
Query: 248 EDCNCYSYDSRKLDEAKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS 305
D C +D+ KCV GH+ ++D + TG+ T S D T R+ YN
Sbjct: 281 MDKTCMLWDATS---GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARV--YNATTR 335
Query: 306 REIYHTKRMQ-RVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVL 352
+ I + + + + F+ + +++GS D R+W + + L VL
Sbjct: 336 KCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVL 383
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 180 (68.4 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 71/300 (23%), Positives = 121/300 (40%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GHRD ++C+ + N K SGSMD + +W + + +++GH+ AV + S G +
Sbjct: 17 GHRDAVTCVDFSIN-TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA 183
L S D TV++W VP E + +V +G F TA
Sbjct: 76 LASGSRDKTVRIW-VP-----------NVKGESTVFRAHTATVRSVHFCSDGQSFVTASD 123
Query: 184 Q--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSS---- 237
V +W +R + + S + V +F+P + ++ + + D+++ L+D
Sbjct: 124 DKTVKVWATHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKSSRECVHS 182
Query: 238 --------------PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTG 283
P+ I A D +D R + + H +AV + + P+G
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQL-HSAAVNGLSFHPSG 241
Query: 284 REFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKA 343
+T S D T++I GR H + V FS Y SG D + +WK+
Sbjct: 242 NYLITASSDSTLKILDLMEGRLLYTLHGHQGPAT-TVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYH-TKRMQRVFCVKFSC 324
V H + V + + G+ FVT S D+T++++ + R + ++ ++ + V C KFS
Sbjct: 98 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATH--RQKFLFSLSQHINWVRCAKFSP 155
Query: 325 DASYVISGSDDTNLRLWKAKASE 347
D ++S SDD ++LW + E
Sbjct: 156 DGRLIVSASDDKTVKLWDKSSRE 178
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 181 (68.8 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 81/345 (23%), Positives = 128/345 (37%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH+ I+ +PN K + S D + LW + +Y GH+ V L S G +
Sbjct: 16 GHKAAITSADFSPN-CKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNL 74
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA 183
L S D TV+LW V P+ +VD +G TA
Sbjct: 75 LASASRDKTVRLW---VLDRKGKSSEFKAHTAPVR---------SVDFSADGQFLVTASE 122
Query: 184 Q--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMS----- 236
+ +W+ R + + S T V +F+P + ++ + + D++I ++D
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTSKQCVNN 181
Query: 237 -------------SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTG 283
SP I A D +D R ++ + H V + + P+G
Sbjct: 182 FSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIR-MNRLLQHYQVHSCGVNCLSFHPSG 240
Query: 284 REFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
VT S D T++I GR IY + VF V FS D SG D + +W+
Sbjct: 241 NSLVTASSDGTVKILDLVEGRL--IYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWR 298
Query: 343 AKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPK 387
++ +H R+ K HL +I H H K
Sbjct: 299 TSFNQ----VHYRDPSKRNLKRLHLEASPHLLDIYPRTPHGHEDK 339
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH ++C +PN +GS D +RLWD+ N V ++GH+G + L S +GR
Sbjct: 605 GHLADVTCTRFHPNS-NYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRF 663
Query: 124 LVSCGTDCTVKLWNV 138
L + TD V LW++
Sbjct: 664 LATGATDGRVLLWDI 678
Score = 127 (49.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCV--HMGHESAVMDIDYSPTGREFVTGSYDRT 294
SP R ++ +ED + L C+ + GH V D +SP G FV+G +DR
Sbjct: 532 SPDRNYLLSCSEDGTVRLWS---LQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRV 588
Query: 295 IRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R++ + + I+ + V C +F +++Y+ +GS D +RLW
Sbjct: 589 ARLWATDHYQPLRIF-AGHLADVTCTRFHPNSNYIATGSADRTVRLW 634
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH+ I +A +PN + +G+ DG + LWDI + V + GH + L S DG I
Sbjct: 647 GHKGPIHSLAFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEI 705
Query: 124 LVSCGTDCTVKLWN 137
L S D TV+LW+
Sbjct: 706 LASGSMDNTVRLWD 719
Score = 120 (47.3 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 38/129 (29%), Positives = 55/129 (42%)
Query: 107 GHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSF 166
GH G V G + S D L+SC D TV+LW++ T P VW F
Sbjct: 521 GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNY---P----VWDTQF 573
Query: 167 WAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTAS 224
G F + G +W + QP+ F V RF+P N +AT ++
Sbjct: 574 SPY-----GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP-NSNYIATGSA 627
Query: 225 DRSITLYDL 233
DR++ L+D+
Sbjct: 628 DRTVRLWDV 636
Score = 112 (44.5 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 265 CVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVK 321
CV + GH+ + + +SP GR TG+ D R+ ++ G + K ++ ++
Sbjct: 641 CVRIFTGHKGPIHSLAFSPNGRFLATGATDG--RVLLWDIGHGLMVGELKGHTDTIYALR 698
Query: 322 FSCDASYVISGSDDTNLRLWKA-KASEQL 349
FS D + SGS D +RLW A KA E L
Sbjct: 699 FSRDGEILASGSMDNTVRLWDAVKAFEDL 727
Score = 54 (24.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 101 TVCQYSGHQGAVRGLT---VSTDGRILVSCGTDCTVKLWNV 138
++C Y+ A +GLT ++ D ++V D TV++W+V
Sbjct: 440 SICFYT-FLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSV 479
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 187 (70.9 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 80/310 (25%), Positives = 129/310 (41%)
Query: 55 ARPFI-GALDGHRDGI-SCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAV 112
A F+ L+GH + + S + + + L S S DG +++WD A GH +V
Sbjct: 293 ATSFLQNTLEGHNEWVKSVVFSHDSRLLA--SASDDGTVKIWDTATGTLQRMLKGHNDSV 350
Query: 113 RGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQ 172
R + S D R++ S D TV++W L +AV SF H
Sbjct: 351 RSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSV--MAV-----SF---AHD 400
Query: 173 WEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD 232
A+ G V IW+ N + D V SV F+P + +LA+ + DR++ ++
Sbjct: 401 SRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSP-DSRLLASASDDRTVKIWH 459
Query: 233 LRMSSPARKVIMRANED---CNCYSYDSR-----------KLDEAKCVHM-----GHESA 273
S R + + D +S+DSR K+ + V + H++
Sbjct: 460 AATGSLQRT--LEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNW 517
Query: 274 VMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGS 333
V + +S R + S D T++I+ G S E RV V FS D+ + S S
Sbjct: 518 VRSVVFSHDSRLLASASDDMTVKIWDTATG-SLENTLEGHDDRVNSVSFSPDSRLLASAS 576
Query: 334 DDTNLRLWKA 343
DD +++W A
Sbjct: 577 DDGTVKIWYA 586
Score = 148 (57.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 63/259 (24%), Positives = 109/259 (42%)
Query: 104 QYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWK 163
Q+ GH AV ++ S D R+L S D TVK+W+ + L W
Sbjct: 258 QFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNE---------WV 308
Query: 164 NSFWAVDHQWEGDLFATAG--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLAT 221
S H + L A+A V IW+ + D+V SV F+ + ++A+
Sbjct: 309 KSV-VFSH--DSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSH-DSRLIAS 364
Query: 222 TASDRSITLYDLRMSSPARKVIMRANED---CNCYSYDSRKLDEA--------------- 263
++DR++ +++ ++ + +ED +++DSR+L A
Sbjct: 365 GSNDRTVRIWET--TTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGS 422
Query: 264 -KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKF 322
+ V GH+ V + +SP R + S DRT++I+ G + V V F
Sbjct: 423 LQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHN-DWVRSVVF 481
Query: 323 SCDASYVISGSDDTNLRLW 341
S D+ + S SDD +++W
Sbjct: 482 SHDSRLIASASDDMTVKIW 500
Score = 128 (50.1 bits), Expect = 0.00024, P = 0.00024
Identities = 68/292 (23%), Positives = 110/292 (37%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATL 143
S S DG +++WD A GH V+ + S D R+L S D TVK+W+ TL
Sbjct: 280 SASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTL 339
Query: 144 XXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGT 203
+ V+ + A G T V IW ++F+
Sbjct: 340 QRMLKGHNDSVRSV-VFSHDSRLIA-----SGSNDRT----VRIWETTTGLLRHTFEDHE 389
Query: 204 DTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRAN-EDCNCYSYDSRKLDE 262
D+V++V F + LA+ + ++ ++D R S + + + +S DSR L
Sbjct: 390 DSVMAVSF-AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLAS 448
Query: 263 A------KCVHM----------GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSR 306
A K H GH V + +S R + S D T++I+ +
Sbjct: 449 ASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQ 508
Query: 307 EIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQR 358
+ V V FS D+ + S SDD +++W L + R
Sbjct: 509 NNLESHD-NWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDR 559
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 179 (68.1 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 86/347 (24%), Positives = 133/347 (38%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH+ I+ + +PN K + S D + LW+ +Y GH+ V + S G +
Sbjct: 16 GHKAAITSLDLSPNG-KQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNL 74
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA 183
L S D TV+LW +P P+ +VD +G ATA
Sbjct: 75 LASASRDRTVRLW-IP--DKRGKFSEFKAHTAPVR---------SVDFSADGQFLATASE 122
Query: 184 Q--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMS----- 236
+ +W+ R + + S T V +F+P + ++ + + D++I ++D
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 237 -------------SPARKVIMRANEDCNCYSYDSR--KLDEAKCVHMGHESAVMDIDYSP 281
+P+ I A D +D R KL + VH G V I + P
Sbjct: 182 FSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG---GVNCISFHP 238
Query: 282 TGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRL 340
+G +T S D T++I GR IY + VF V FS SG DT + L
Sbjct: 239 SGNYLITASSDGTLKILDLLEGRL--IYTLQGHTGPVFTVSFSKGGELFASGGADTQVLL 296
Query: 341 WKAKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPK 387
W+ E LH + K + HL +I H H K
Sbjct: 297 WRTNFDE----LHCKGLTKRNLKRLHFDSPPHLLDIYPRTPHPHEEK 339
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 63/260 (24%), Positives = 112/260 (43%)
Query: 105 YSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVATLXXXXXXXXXXXEPLAVYVW- 162
+ GH+ A+ L +S +G+ L + D + LWN P A YV
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYR--------------YVGH 59
Query: 163 KNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLA 220
K+ +V G+L A+A V +W ++ + F+ T V SV F+ A+ LA
Sbjct: 60 KDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFS-ADGQFLA 118
Query: 221 TTASDRSIT---------LYDL-------RMS--SPARKVIMRANEDCNCYSYDSRKLDE 262
T + D+SI LY L R + SP ++I+ +ED +D+
Sbjct: 119 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN--- 175
Query: 263 AKCVHMGHESAVMD--IDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCV 320
+CV+ +S +D++P+G + D+T++++ + + Y V C+
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV-HSGGVNCI 234
Query: 321 KFSCDASYVISGSDDTNLRL 340
F +Y+I+ S D L++
Sbjct: 235 SFHPSGNYLITASSDGTLKI 254
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 55/260 (21%), Positives = 111/260 (42%)
Query: 64 GHRDGISCMAKNPN-YLKGFFSGSMDGDIRLW--DIANRRTVCQYSGHQGAVRGLTVSTD 120
GH+D ++C+ +P+ +L SGS D +R+W ++ TV + H VR + +D
Sbjct: 59 GHKDAVTCVNFSPSGHLLA--SGSRDKTVRIWIPNVKGESTV--FRAHTATVRSVHFCSD 114
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYV-W-KNSFWAVDHQWEGDLF 178
G+ LV+ D TVK+W+ L+ ++ W + + ++ D + +
Sbjct: 115 GQSLVTASDDKTVKVWSTHRQKFLFS----------LSQHINWVRCARFSPDGRLI--VS 162
Query: 179 ATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASD----------RSI 228
A+ V +W+ + ++S+ V V F+P+ + A + + R +
Sbjct: 163 ASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLL 222
Query: 229 TLYDLRMSS-------PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSP 281
Y L ++ P+ ++ A+ D D + +H GH+ + +S
Sbjct: 223 QHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLH-GHQGPATTVAFSR 281
Query: 282 TGREFVTGSYDRTIRIFQYN 301
TG F +G D + +++ N
Sbjct: 282 TGEYFASGGSDEQVMVWKSN 301
Score = 115 (45.5 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GHRD I+ + + N K SGSMD + +W + + +++GH+ AV + S G +
Sbjct: 17 GHRDAITSVDFSLN-TKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHL 75
Query: 124 LVSCGTDCTVKLWNVP 139
L S D TV++W +P
Sbjct: 76 LASGSRDKTVRIW-IP 90
Score = 109 (43.4 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYH-TKRMQRVFCVKFSC 324
V H + V + + G+ VT S D+T++++ + R + ++ ++ + V C +FS
Sbjct: 98 VFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTH--RQKFLFSLSQHINWVRCARFSP 155
Query: 325 DASYVISGSDDTNLRLWKAKASE 347
D ++S SDD ++LW + E
Sbjct: 156 DGRLIVSASDDKTVKLWDKTSRE 178
Score = 97 (39.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 29/119 (24%), Positives = 53/119 (44%)
Query: 237 SPARKVIMRANEDCNCYSYD--SRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
SP ++I+ A++D +D SR+ + C H G V +D+ P+G S D T
Sbjct: 154 SPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF---VTYVDFHPSGTCIAAASMDNT 210
Query: 295 IRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLH 353
++++ R + Y V + F +Y+++ S D+ L++ L LH
Sbjct: 211 VKVWDVRTHRLLQHYQL-HSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLH 268
Score = 91 (37.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H +AV + + P+G +T S D T++I GR H + V FS Y
Sbjct: 228 HSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPAT-TVAFSRTGEYF 286
Query: 330 ISGSDDTNLRLWKA 343
SG D + +WK+
Sbjct: 287 ASGGSDEQVMVWKS 300
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 72/296 (24%), Positives = 121/296 (40%)
Query: 62 LDGHRDGISCMAKNPNYL----KGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
L GH I+ ++ P ++ + S S DG +R+WD R +GH +V L
Sbjct: 197 LTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 256
Query: 118 STDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAV---YVWKNSFW-----AV 169
DG +L S D T+K+W L +A+ Y + + V
Sbjct: 257 GGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATV 315
Query: 170 DHQ-WEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNV-LATTASDRS 227
+ Q +G L +N R Q G+D ++PAE LA ++
Sbjct: 316 NAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA 375
Query: 228 ITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV 287
L + + SP +++ A+ D + +D R + GH +AV I +S R V
Sbjct: 376 --LINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLR-GHVAAVYQIAWSADSRLLV 432
Query: 288 TGSYDRTIRIFQYNGGR-SREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
+GS D T++++ + + ++ V+ V +S D V SG D LR+W+
Sbjct: 433 SGSSDSTLKVWDVKAQKLTTDL--PGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 486
Score = 130 (50.8 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 40/164 (24%), Positives = 81/164 (49%)
Query: 196 INSFQWGTDTVISV-RFNPAEPNVLATTAS-------DRSITLYDL-RMSSPARKVIMRA 246
+N+ TD + F PAE V A +R+ + Y+L R P R ++
Sbjct: 292 VNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPER--LVSG 349
Query: 247 NEDCNCYSYDSRKLDEAKCVHM-GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS 305
++D + + + D+ M GH++ + + +SP R + S+D++I+++ GR+
Sbjct: 350 SDDFTLFLWSPAE-DKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWD---GRT 405
Query: 306 REIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
+ + R + V+ + +S D+ ++SGS D+ L++W KA +
Sbjct: 406 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK 449
Score = 95 (38.5 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+L+GH + + +A +P K SGS D +R WD++ GH+ V ++ S D
Sbjct: 111 SLEGHSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPD 169
Query: 121 GRILVSCGTDCTVKLWNVPVAT 142
G+ L S + + LW+ T
Sbjct: 170 GKKLASGCKNGQILLWDPSTGT 191
Score = 77 (32.2 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
+P R + S D ++R++ GR I T Q V C+++ D + S S D ++
Sbjct: 215 NPECRYVASSSKDGSVRVWDTTAGRCERIL-TGHTQSVTCLRWGGDG-LLYSASQDRTIK 272
Query: 340 LWKA 343
+W+A
Sbjct: 273 VWRA 276
Score = 63 (27.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 100 RTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
R GH AV + S G+ L S D TV+ W++ T
Sbjct: 107 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTET 149
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 184 (69.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 71/297 (23%), Positives = 126/297 (42%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
GIS P L SG I+LWD + ++ H G VRG+ D I VS
Sbjct: 16 GISFHPTRPWVLTSLHSGV----IQLWDYRMCVLLEKFDEHDGPVRGICFHHDQPIFVSG 71
Query: 128 GTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI 187
G D +K+WN Y+ + +F+ H++ + A+ V I
Sbjct: 72 GDDYKIKVWNYKQKRCIFTLLGHLD-------YI-RTTFF--HHKYPWIISASDDQTVRI 121
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRAN 247
WN I V+ +F+P E +++A+ + D+++ ++D+ S +K +
Sbjct: 122 WNWQSRNSIAILTGHNHYVMCAQFHPTE-DLVASASLDQTVRVWDI--SGLRKKQMPGGG 178
Query: 248 EDCNCYSYDSRKL---DEAKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
+L +A H+ GH+ V + + T V+GS DR ++I++YN
Sbjct: 179 APSRPTGGQQAELFGQPDAVVKHVLEGHDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNE 238
Query: 303 GRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQR 358
++ E+ + V V F +A ++S S+D ++R+W + L V +R
Sbjct: 239 TKAWELDSCRGHYNNVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLHVFRHENER 295
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 170 (64.9 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 54/185 (29%), Positives = 83/185 (44%)
Query: 49 KLEKIFARPFIGALDGHRDGISCMAKNP--NYLKGFFSGSMDGDIRLWDIANRRTVCQYS 106
+L + A + L GH+ IS + +P YL SGS+D +I+LWD+ + V +Y
Sbjct: 88 RLWDLEAAKILRTLMGHKASISSLDFHPMGEYLA---SGSVDSNIKLWDVRRKGCVFRYK 144
Query: 107 GHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSF 166
GH AVR L S DG+ L S D TVKLW++ + V N +
Sbjct: 145 GHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVN--VVQFHPNEY 202
Query: 167 WAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDR 226
+A V +W+ + I S + T V SV FNP + + L + S+
Sbjct: 203 LLAS--------GSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNP-DGSCLYS-GSEN 252
Query: 227 SITLY 231
++ +Y
Sbjct: 253 TLRVY 257
Score = 162 (62.1 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 65/253 (25%), Positives = 108/253 (42%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
I +L GH + C+ N + + +GS+ G +RLWD+ + + GH+ ++ L
Sbjct: 56 IMSLTGHTSAVGCIQFNSSEER-VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFH 114
Query: 119 TDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLF 178
G L S D +KLW+V LA ++ D +W
Sbjct: 115 PMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLA--------FSPDGKWLAS-- 164
Query: 179 ATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRM--- 235
A+ + V +W+ + I F T V V+F+P E +LA+ ++DR++ L+DL
Sbjct: 165 ASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE-YLLASGSADRTVKLWDLEKFNM 223
Query: 236 --SSPARKVIMRA---NEDCNC-YSYDSRKL-----DEAKC---VHMGHESAVMDIDYSP 281
SS ++R+ N D +C YS L + +C VH+G V D+ S
Sbjct: 224 IGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWEPDRCFDVVHVGW-GKVSDLAIS- 281
Query: 282 TGREFVTGSYDRT 294
+ + SY T
Sbjct: 282 -NNQMIAVSYSHT 293
Score = 127 (49.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 260 LDEAKCVH--MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQR 316
L+ AK + MGH++++ +D+ P G +GS D I+++ R ++ K Q
Sbjct: 92 LEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVR--RKGCVFRYKGHTQA 149
Query: 317 VFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
V C+ FS D ++ S SDD+ ++LW A + +
Sbjct: 150 VRCLAFSPDGKWLASASDDSTVKLWDLIAGKMI 182
Score = 49 (22.3 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 327 SYVISGSDDTNL---RLWKA-----KASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKR 378
SYV +G L R W A +GV RE+R H+ K YK L +
Sbjct: 611 SYVQTGCMSLKLILKRFWPLISDTLNAPPSVGVDITREER----HQKCKACYKQLKNLSN 666
Query: 379 IVRHR 383
+V++R
Sbjct: 667 VVKNR 671
Score = 45 (20.9 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 215 EPNVLATTASDRSITLYDLRMSSPARKVI 243
EP V+A A+ R + + SSP+R V+
Sbjct: 455 EPTVIA--AAPRPVAVVTTSASSPSRPVV 481
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 72/296 (24%), Positives = 121/296 (40%)
Query: 62 LDGHRDGISCMAKNPNYL----KGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
L GH I+ ++ P ++ + S S DG +R+WD R +GH +V L
Sbjct: 195 LTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 254
Query: 118 STDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAV---YVWKNSFW-----AV 169
DG +L S D T+K+W L +A+ Y + + V
Sbjct: 255 GGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATV 313
Query: 170 DHQ-WEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNV-LATTASDRS 227
+ Q +G L +N R Q G+D ++PAE LA ++
Sbjct: 314 NAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA 373
Query: 228 ITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV 287
L + + SP +++ A+ D + +D R + GH +AV I +S R V
Sbjct: 374 --LINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLR-GHVAAVYQIAWSADSRLLV 430
Query: 288 TGSYDRTIRIFQYNGGR-SREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
+GS D T++++ + + ++ V+ V +S D V SG D LR+W+
Sbjct: 431 SGSSDSTLKVWDVKAQKLATDL--PGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 130 (50.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 40/164 (24%), Positives = 81/164 (49%)
Query: 196 INSFQWGTDTVISV-RFNPAEPNVLATTAS-------DRSITLYDL-RMSSPARKVIMRA 246
+N+ TD + F PAE V A +R+ + Y+L R P R ++
Sbjct: 290 VNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPER--LVSG 347
Query: 247 NEDCNCYSYDSRKLDEAKCVHM-GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS 305
++D + + + D+ M GH++ + + +SP R + S+D++I+++ GR+
Sbjct: 348 SDDFTLFLWSPAE-DKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWD---GRT 403
Query: 306 REIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
+ + R + V+ + +S D+ ++SGS D+ L++W KA +
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK 447
Score = 94 (38.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+L+GH + + +A +P K SGS D +R WD++ GH+ V ++ S D
Sbjct: 109 SLEGHSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPD 167
Query: 121 GRILVSCGTDCTVKLWN 137
G+ L S + V LW+
Sbjct: 168 GKKLASGCKNGQVLLWD 184
Score = 77 (32.2 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
+P R + S D ++R++ GR I T Q V C+++ D + S S D ++
Sbjct: 213 NPECRYVASSSKDGSVRVWDTTAGRCERIL-TGHTQSVTCLRWGGDG-LLYSASQDRTIK 270
Query: 340 LWKA 343
+W+A
Sbjct: 271 VWRA 274
Score = 63 (27.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 100 RTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
R GH AV + S G+ L S D TV+ W++ T
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTET 147
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 81/342 (23%), Positives = 129/342 (37%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH+ I+ +PN K + S D + LW + +Y GH+ V L S G +
Sbjct: 16 GHKAAITSADFSPN-CKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNL 74
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA 183
L S D TV+LW V P+ +VD +G L TA
Sbjct: 75 LASASRDRTVRLW---VLDRKGKSSEFKAHTAPVR---------SVDFSADGQLLVTASE 122
Query: 184 Q--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMS----- 236
+ +W+ R + + S T V +F+P + ++ + + D++I ++D
Sbjct: 123 DKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 237 -------------SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTG 283
+P I A D +D R +++ + H V + + P G
Sbjct: 182 FSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIR-MNKLLQHYQVHSCGVNCLSFHPLG 240
Query: 284 REFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
VT S D T+++ GR IY + VF V FS D + SG D + +W+
Sbjct: 241 NSLVTASSDGTVKMLDLIEGRL--IYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWR 298
Query: 343 AKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRH 384
L P+ K + EA HL +I H H
Sbjct: 299 TNFIH-LHCKDPKRNLKRLHFEASP----HLLDIYPRSPHSH 335
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 170 (64.9 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 66/290 (22%), Positives = 122/290 (42%)
Query: 65 HRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRIL 124
H ++C A +P+ + + S DG + +W + R + + +GH+G V+ S DGR++
Sbjct: 25 HHGEVNCSAFSPDG-RTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLI 83
Query: 125 VSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ 184
S +D +++LW+V + E ++ +S W+ +
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFS--PDSKQLASGGWD--------KR 133
Query: 185 VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIM 244
+W + ++ D++ S F+P + LAT + D ++ ++DLR S+P
Sbjct: 134 AIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDS-LATGSWDSTVHIWDLRASTPVVSYHN 192
Query: 245 ----RANEDCNCYSYD----SRKLDEAKCVHM-----------GHESAVMDIDYSPTGRE 285
N C CYS S D+ CV GH V + +SP +
Sbjct: 193 LEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELK 252
Query: 286 FVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVF--CVKFSCDASYVISGS 333
+ Y RT++++ G+ E K M V C+ F+ D ++SG+
Sbjct: 253 LASAGYSRTVKVWDCLTGKCLETL--KGMLDVAHACI-FTPDGKLLVSGA 299
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 74/295 (25%), Positives = 124/295 (42%)
Query: 62 LDGHRDGISCMAKNPNYLKG----FFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
L GH I+ ++ P +L S S D IR+WD + + + SGH +V L
Sbjct: 221 LKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKW 280
Query: 118 STDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAV---YVWKNSFWAVDHQW- 173
+G ++ S D TV+++N L LA+ YV + + DH
Sbjct: 281 GGEG-LIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSY--DHTGK 337
Query: 174 EGDLFATAGAQVDIWNHN----RSQPINSFQWGTDTVISVRFNPA--EPNVLATTASDRS 227
E D A +V + +N +S+ + G+D + +NP+ + ++ T +
Sbjct: 338 EYDTLEEA-QRVALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQL 396
Query: 228 ITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV 287
I L SP + A+ D + +D + + GH AV + +S R V
Sbjct: 397 INLVSF---SPDGRYFASASFDKSIKLWDGQS-GKFLGNFRGHVGAVYQVCWSSDSRYLV 452
Query: 288 TGSYDRTIRIFQYNGGR-SREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
+GS D T++I+ + +E+ V+ V +S D V SGS D LR+W
Sbjct: 453 SGSKDSTLKIWDIKTKKMEKEL--PGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 130 (50.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 26/116 (22%), Positives = 60/116 (51%)
Query: 232 DLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSY 291
D++ S ++++ ++D ++ + GH+ + + +SP GR F + S+
Sbjct: 355 DVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASF 414
Query: 292 DRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
D++I+++ G+ + + V+ V +S D+ Y++SGS D+ L++W K +
Sbjct: 415 DKSIKLWDGQSGKFLGNFRG-HVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKK 469
Score = 128 (50.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
I L GH+ I+ ++ +P+ + F S S D I+LWD + + + + GH GAV + S
Sbjct: 387 ISRLTGHQQLINLVSFSPDG-RYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWS 445
Query: 119 TDGRILVSCGTDCTVKLWNV 138
+D R LVS D T+K+W++
Sbjct: 446 SDSRYLVSGSKDSTLKIWDI 465
Score = 91 (37.1 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
++ GH + + A +P+ KGF S D +R+WDI GH V + S D
Sbjct: 135 SMSGHTEAVLNCAFSPDG-KGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPD 193
Query: 121 GRILVSCGTDCTVKLW 136
+ + + G + +++W
Sbjct: 194 SKKIATAGMEGDIRIW 209
Score = 81 (33.6 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREF-VTGSYDRTIRIFQY 300
V+ + D YD+ L+EA+ V + + D+ G E ++GS D T+ ++
Sbjct: 326 VLRTGSYDHTGKEYDT--LEEAQRVALERYN---DVKAKSKGMEILISGSDDFTVIMWNP 380
Query: 301 NGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLG 350
+ ++ T Q + V FS D Y S S D +++LW ++ + LG
Sbjct: 381 SVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLG 430
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 174 (66.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 86/347 (24%), Positives = 132/347 (38%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH+ I+ + +PN K + S D + LW+ +Y GH+ V + S G +
Sbjct: 16 GHKAAITSLDLSPNG-KQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNL 74
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA 183
L S D TV+LW +P P+ +VD +G ATA
Sbjct: 75 LASASRDRTVRLW-IP--DKRGKFSEFKAHTAPVR---------SVDFSADGQFLATASE 122
Query: 184 Q--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMS----- 236
+ +W+ R + + S T V +F+P + ++ + + D++I ++D
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 237 -------------SPARKVIMRANEDCNCYSYDSR--KLDEAKCVHMGHESAVMDIDYSP 281
+P+ I A D +D R KL + VH G V I + P
Sbjct: 182 FSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG---GVNCISFHP 238
Query: 282 TGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRL 340
+ VT S D T++I GR IY + VF V FS SG DT + L
Sbjct: 239 SDNYLVTASSDGTLKILDLLEGRL--IYTLQGHTGPVFTVSFSKGGELFASGGADTQVLL 296
Query: 341 WKAKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPK 387
W+ E LH + K + HL +I H H K
Sbjct: 297 WRTNFDE----LHCKGLNKRNLKRLHFDSPPHLLDIYPRTPHPHEEK 339
Score = 127 (49.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 62/260 (23%), Positives = 112/260 (43%)
Query: 105 YSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVATLXXXXXXXXXXXEPLAVYVW- 162
+ GH+ A+ L +S +G+ L + D + LWN P A YV
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYR--------------YVGH 59
Query: 163 KNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLA 220
K+ +V G+L A+A V +W ++ + F+ T V SV F+ A+ LA
Sbjct: 60 KDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFS-ADGQFLA 118
Query: 221 TTASDRSIT---------LYDL-------RMS--SPARKVIMRANEDCNCYSYDSRKLDE 262
T + D+SI LY L R + SP ++I+ +ED +D+
Sbjct: 119 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN--- 175
Query: 263 AKCVHMGHESAVMD--IDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCV 320
+CV+ +S +D++P+G + D+T++++ + + Y V C+
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV-HSGGVNCI 234
Query: 321 KFSCDASYVISGSDDTNLRL 340
F +Y+++ S D L++
Sbjct: 235 SFHPSDNYLVTASSDGTLKI 254
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 173 (66.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 71/300 (23%), Positives = 121/300 (40%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GHRD ++ + + N K SGSMD + +W + + +++GH+ AV + S G +
Sbjct: 17 GHRDAVTSVDFSLN-TKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHL 75
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA 183
L S D TV++W VP E + +V +G F TA
Sbjct: 76 LASGSRDKTVRIW-VP-----------NVKGESTVFRAHTATVRSVHFCSDGQSFVTASD 123
Query: 184 Q--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSS---- 237
V +W+ +R + + S + V +F+P + ++ + + D+++ L+D
Sbjct: 124 DKTVKVWSTHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHS 182
Query: 238 --------------PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTG 283
P+ I A D +D R + + H +AV + + P+G
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQL-HSAAVNALSFHPSG 241
Query: 284 REFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKA 343
VT S D T++I GR H + V FS Y SG D + +WK+
Sbjct: 242 NYLVTASSDSTLKILDLMEGRLLYTLHGHQGPAT-TVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYH-TKRMQRVFCVKFSC 324
V H + V + + G+ FVT S D+T++++ + R + ++ ++ + V C KFS
Sbjct: 98 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTH--RQKFLFSLSQHINWVRCAKFSP 155
Query: 325 DASYVISGSDDTNLRLWKAKASE 347
D ++S SDD ++LW + E
Sbjct: 156 DGRLIVSASDDKTVKLWDKTSRE 178
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 138 (53.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 60/274 (21%), Positives = 110/274 (40%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATL 143
S S D IR+WD GH +V+ + G++L SC D ++KLW+ +
Sbjct: 125 SASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYE 184
Query: 144 XXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGT 203
+V A D+ L A+ + +W + ++
Sbjct: 185 CIKTMHGHDHNVSSVAFVP-----AGDYV----LSASRDRTIKMWEVATGYCVKTYTGHR 235
Query: 204 DTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDC-NCYSYDSRKLDE 262
+ V VR + E ++ AT ++D++I ++ L S KV +R +E C ++ E
Sbjct: 236 EWVRMVRVH-IEGSIFATCSNDQTIRVW-LTNSKDC-KVELRDHEHTVECIAW----APE 288
Query: 263 AKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKF 322
A + + + G +GS D+TIRI+ + G + + V + F
Sbjct: 289 AAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCL-LTLSGHDNWVRGLAF 347
Query: 323 SCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE 356
Y++S SDD +R+W + + L+ +
Sbjct: 348 HPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQ 381
Score = 117 (46.2 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+L GHR I+ + +P + S S D IR+WD GH +V+ +
Sbjct: 103 SLTGHRASITRVIFHPIFAL-MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQ 161
Query: 121 GRILVSCGTDCTVKLWN 137
G++L SC D ++KLW+
Sbjct: 162 GKLLASCSADLSIKLWD 178
Score = 116 (45.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 59 IGALDGHRDGISCMAKNP--NYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLT 116
I + GH +S +A P +Y+ S S D I++W++A V Y+GH+ VR +
Sbjct: 186 IKTMHGHDHNVSSVAFVPAGDYV---LSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 117 VSTDGRILVSCGTDCTVKLW 136
V +G I +C D T+++W
Sbjct: 243 VHIEGSIFATCSNDQTIRVW 262
Score = 102 (41.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFC--VKFSCDA 326
GH++ V + + P G+ V+ S D+TIR++ R++ T + FC + F
Sbjct: 337 GHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL---RNKRCMKTLYAHQHFCTSIDFHKAH 393
Query: 327 SYVISGSDDTNLRLWKAK 344
YVISGS D +++W+ +
Sbjct: 394 PYVISGSVDQTVKVWECR 411
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 173 (66.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 65/297 (21%), Positives = 112/297 (37%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L+GHR+ + +A N Y +GS D +LW + + + GH + L+ +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSF--WAVDHQ---WEGD 176
++ + D T KLW++ L+ N + DH WE D
Sbjct: 190 TLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEAD 249
Query: 177 LFATAGAQV-DIWNHNRSQPINSFQWGTDTVISVRFNP------AEPNVLATTASDRSIT 229
G +V + H F W +++ + A T +
Sbjct: 250 ----TGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDE 305
Query: 230 LYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHM--GHESAVMDIDYSPTGREFV 287
+ D K+I A+ D + + + CV GHE + I ++P G +
Sbjct: 306 ILDSCFDYTG-KLIATASADGTARIFSAATRE---CVTKLEGHEGEISKISFNPQGNRLL 361
Query: 288 TGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
TGS D+T RI+ G+ ++ HT +F F+ +I+GS D R+W+
Sbjct: 362 TGSSDKTARIWDAQTGQCLQVLEGHT---DEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 152 (58.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 74/295 (25%), Positives = 126/295 (42%)
Query: 82 FFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGT-DCTVKLWNVPV 140
F +GS D +LWD A+ + GH+ V + + ++ G+ D T KLW+V
Sbjct: 107 FITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET 166
Query: 141 ATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQ 200
L+ + +++ A G + TA +W+ + + +
Sbjct: 167 GKCYHTFRGHTAEIVCLS-FNPQSTLVAT-----GSMDTTA----KLWDIQSGEEVFTLT 216
Query: 201 WGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKV---------IMRA--NED 249
+ +IS+ FN + N + T + D ++T+++ + RKV I A N D
Sbjct: 217 GHSAEIISLSFNTSG-NRIITGSFDHTVTVWE---ADTGRKVYTLIGHCAEISSAVFNWD 272
Query: 250 CNCY---SYDSR-KLDEA---KCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQY 300
C+ S D KL +A KCV GH+ ++D + TG+ T S D T RIF
Sbjct: 273 CSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS- 331
Query: 301 NGGRSREIYHTK---RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVL 352
+RE TK + + F+ + +++GS D R+W A+ + L VL
Sbjct: 332 --AATRECV-TKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVL 383
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 165 (63.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 73/298 (24%), Positives = 116/298 (38%)
Query: 59 IG-ALDGHRDGISCMAKNPNYL----KGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVR 113
IG L GH I+C+ P ++ + S S DG IR+WD R +GH +V
Sbjct: 204 IGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVT 263
Query: 114 GLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAV---YVWKNSFW--- 167
+ DG +L S D T+K+W L +A+ YV + +
Sbjct: 264 CVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPA 322
Query: 168 --AVDHQ-WEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTAS 224
++ Q G L ++ R Q G+D + PAE +
Sbjct: 323 EATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMT 382
Query: 225 DRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGR 284
+ + + SP ++I A+ D + ++ R + GH SAV I +S R
Sbjct: 383 GHQALINQV-LFSPDTRIIASASFDKSIKLWEGRTGKYLTSLR-GHVSAVYQIAWSADSR 440
Query: 285 EFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
V+GS D T++++ + I VF +S D V SG D LR+W+
Sbjct: 441 LLVSGSSDSTLKVWDAET-KKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIWR 497
Score = 126 (49.4 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 39/164 (23%), Positives = 82/164 (50%)
Query: 196 INSFQWGTDTVISV-RFNPAEPNVLATTAS-------DRSITLYD-LRMSSPARKVIMRA 246
+N+ TD V+ F PAE + S D++ YD +R P R ++
Sbjct: 303 VNTMALSTDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPER--LVSG 360
Query: 247 NEDCNCYSYDSRKLDEAKCVHM-GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS 305
++D + + + D+ M GH++ + + +SP R + S+D++I++++ GR+
Sbjct: 361 SDDFTLFLWRPAE-DKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWE---GRT 416
Query: 306 REIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
+ + R + V+ + +S D+ ++SGS D+ L++W A+ +
Sbjct: 417 GKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKK 460
Score = 94 (38.1 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+L+GH + + +A +P K SGS D +R WD++ GH+ V + S D
Sbjct: 122 SLEGHTEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPD 180
Query: 121 GRILVSCGTDCTVKLWN 137
G+ L S + + LW+
Sbjct: 181 GKKLASGCKNSQIFLWD 197
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 114 (45.2 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 28/84 (33%), Positives = 45/84 (53%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQ-YNGGRSREIYHTK----------RMQRV 317
GH+S+V+ D+SP VT SYD ++ ++ Y G R R ++HT+ M +
Sbjct: 237 GHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHMSSL 296
Query: 318 FCVKFSCDASYVISGSDDTNLRLW 341
V FS + Y+ + +DD LR+W
Sbjct: 297 RSVCFSPEGLYLATVADDRLLRIW 320
Score = 104 (41.7 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR-ILVSCGTDCTVKLWNV 138
+G DG I++W++ + SGHQ VR L+ + +G ILVS D T+++W++
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDL 183
Score = 57 (25.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H S++ + +SP G T + DR +RI+ + M C F +
Sbjct: 292 HMSSLRSVCFSPEGLYLATVADDRLLRIWALE---LKAPVAFAPMTNGLCCTFFPHGGVI 348
Query: 330 ISGSDDTNLRLWKA 343
+G+ D +++ W A
Sbjct: 349 ATGTRDGHVQFWTA 362
Score = 52 (23.4 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 11/50 (22%), Positives = 23/50 (46%)
Query: 184 QVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
Q+ IW + + D V + F P +L + + D+++ ++DL
Sbjct: 134 QIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDL 183
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 114 (45.2 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 28/84 (33%), Positives = 45/84 (53%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQ-YNGGRSREIYHTK----------RMQRV 317
GH+S+V+ D+SP VT SYD ++ ++ Y G R R ++HT+ M +
Sbjct: 237 GHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEPTMDDSDVHMSSL 296
Query: 318 FCVKFSCDASYVISGSDDTNLRLW 341
V FS + Y+ + +DD LR+W
Sbjct: 297 RSVCFSPEGLYLATVADDRLLRIW 320
Score = 103 (41.3 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR-ILVSCGTDCTVKLWNV 138
+G DG I++W++ + SGHQ VR L+ + G ILVS D T+++W++
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 183
Score = 58 (25.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 167 WAVDHQWEGD----LFATA--GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLA 220
WA H D + AT Q+ IW + + D V + F P+ +L
Sbjct: 111 WARHHPQAPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILV 170
Query: 221 TTASDRSITLYDL 233
+ + D+++ ++DL
Sbjct: 171 SASRDKTLRIWDL 183
Score = 57 (25.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H S++ + +SP G T + DR +RI+ + M C F +
Sbjct: 292 HMSSLRSVCFSPEGLYLATVADDRLLRIWALE---LKAPVAFAPMTNGLCCTFFPHGGII 348
Query: 330 ISGSDDTNLRLWKA 343
+G+ D +++ W A
Sbjct: 349 ATGTRDGHVQFWTA 362
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 122 (48.0 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 43/187 (22%), Positives = 86/187 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RFN ++ T + DRSI ++D M+SP+
Sbjct: 267 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWD--MTSPS 321
Query: 240 ----RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDY 279
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 322 EITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 381
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
R V+GS D +IR++ G + + V C++F D ++SG+ D ++
Sbjct: 382 RD--RLVVSGSSDNSIRLWDIECGACLRVLEGHE-ELVRCIRF--DTKRIVSGAYDGKIK 436
Query: 340 LWKAKAS 346
+W A+
Sbjct: 437 VWDLVAA 443
Score = 97 (39.2 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + SG D I++WD + + V GH G+V L + D ++++S
Sbjct: 212 GVYCLQYDDGKI---VSGLRDNTIKIWDRTDLQCVKTLMGHTGSV--LCLQYDDKVIISG 266
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 267 SSDSTVRVWDV 277
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 122 (48.0 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
I + GH +S +A PN S S D +++W++A V ++GH+ VR + +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPN 243
Query: 119 TDGRILVSCGTDCTVKLWNV 138
DG +L SC D TV++W V
Sbjct: 244 QDGTLLASCSNDQTVRVWVV 263
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 53/244 (21%), Positives = 101/244 (41%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
AL GHR ++ + +P + S S D I++WD GH +V+ ++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSL-MVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQT 161
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G++L SC D T+KLW+ +A+ N DH + A+
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM--PNG----DHI----VSAS 211
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
+ +W + +F + V VR N + +LA+ ++D+++ ++ + ++
Sbjct: 212 RDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQ-DGTLLASCSNDQTVRVWVV--ATKEC 268
Query: 241 KVIMRANEDC-NCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQ 299
K +R +E C S+ G E+ P G ++GS D+TI+++
Sbjct: 269 KAELREHEHVVECISWAPESAHPTISEATGSENKKSG---KP-GPFLLSGSRDKTIKMWD 324
Query: 300 YNGG 303
+ G
Sbjct: 325 ISTG 328
Score = 94 (38.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH++ V + + P GR V+ + D+T+RI+ Y R + V + F +
Sbjct: 335 VGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHE-HFVTSLDFHKASP 393
Query: 328 YVISGSDDTNLRLWKAK 344
YV++GS D +++W+ +
Sbjct: 394 YVVTGSVDQTVKVWECR 410
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 172 (65.6 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 76/297 (25%), Positives = 122/297 (41%)
Query: 61 ALDGHRDGISCMAKNPNYL----KGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLT 116
AL GH I+ ++ P + + S S DG +R+WD R +GH +V L
Sbjct: 195 ALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLR 254
Query: 117 VSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAV---YVWKNSFW-----A 168
DG +L S D T+K+W L +A+ Y + + +
Sbjct: 255 WGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEAS 313
Query: 169 VDHQ-WEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNV-LATTASDR 226
V+ Q G L + +N R Q G+D ++PAE LA +
Sbjct: 314 VNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQ 373
Query: 227 SITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREF 286
+ L + + SP +VI A+ D + +D R + GH +AV I +S R
Sbjct: 374 A--LINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLR-GHVAAVYQIAWSADSRLL 430
Query: 287 VTGSYDRTIRIFQYNGGR-SREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
V+GS D T++++ + S ++ V+ V +S D V SG D LR+W+
Sbjct: 431 VSGSSDSTLKVWDVKAQKLSTDL--PGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 485
Score = 138 (53.6 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 40/164 (24%), Positives = 83/164 (50%)
Query: 196 INSFQWGTDTVISV-RFNPAEPNVLATTA-------SDRSITLYDL-RMSSPARKVIMRA 246
+N+ TD + F PAE +V A +R+++ Y+L R P R ++
Sbjct: 291 VNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPER--LVSG 348
Query: 247 NEDCNCYSYDSRKLDEAKCVHM-GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS 305
++D + + + D+ M GH++ + + +SP R + S+D++I+++ GR+
Sbjct: 349 SDDFTLFLWSPAE-DKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWD---GRT 404
Query: 306 REIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
+ + R + V+ + +S D+ ++SGS D+ L++W KA +
Sbjct: 405 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK 448
Score = 63 (27.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 100 RTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
R GH AV + S G+ L S D TV+ W++ T
Sbjct: 106 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTET 148
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 122 (48.0 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 35/112 (31%), Positives = 55/112 (49%)
Query: 260 LDEAKCVH---MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQ 315
LD C H H+ +VM + + P F T DR I+ Q++ + + + Q
Sbjct: 620 LDFGDC-HKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIK--QWDADKFEHVQTLEGHHQ 676
Query: 316 RVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE-QRKHAYHEAV 366
++C+ S YV+S S D +LRLW+ + E L + RE QR+ Y E+V
Sbjct: 677 EIWCLAISPSGDYVVSSSHDKSLRLWE-RTREPLILEEEREMQREAEYEESV 727
Score = 103 (41.3 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 63 DGHRDGISCMAKNPNYLKG-FFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+GH+ ++ + + L G SGS D DI +WD+ N + + GH+ A+ +
Sbjct: 104 NGHKAAVTSLKYDQ--LGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREK 161
Query: 122 RILVSCGTDCTVKLWNV 138
+LVS G D VK W++
Sbjct: 162 NLLVSSGKDTMVKWWDL 178
Score = 87 (35.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 85 GSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
G+ G ++L+D+A+ + H GA+ L++S D R V+ G D +VK W+
Sbjct: 472 GTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWD 524
Score = 84 (34.6 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L G + ++C+ +P+ L G DG IR++ + + ++GH+ AV L G
Sbjct: 61 LQGLKHEVTCLCPSPDGLH-LAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLG 119
Query: 122 RILVSCGTDCTVKLWNV 138
L S D + +W+V
Sbjct: 120 GRLASGSKDTDIIVWDV 136
Score = 78 (32.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 62 LDGHRDGIS--CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
L GH+D I+ + N L S D ++ WD+ + GH+ V GL + +
Sbjct: 145 LKGHKDAITQALFLREKNLL---VSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVS 201
Query: 120 DGRILVSCGTDCTVKLWNV 138
+ + L++ +D ++ W++
Sbjct: 202 EEKRLITGASDSELRAWDI 220
Score = 50 (22.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 88 DGDIRLWDIANRRTV-CQYSG---HQGAVRGLTVSTD--GRILVSCGTDCTVKLWNV 138
DG + + + R + C+ +G +G R + ++ D GRIL GTD ++++ V
Sbjct: 252 DGTLEMDEAPEDRILTCRKAGSIMREGRDRVVNLAVDRTGRILACHGTDSVLEVFRV 308
Score = 49 (22.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 80 KGFFSGSMDGDIRLWDIA 97
K +G+ D ++R WDIA
Sbjct: 204 KRLITGASDSELRAWDIA 221
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 116 (45.9 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 63 DGHRDGISC--MAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
D H + ++C N N+L +GS D ++LWD+ GH +V S D
Sbjct: 698 DEHSEQVNCCHFTNNSNHLL-LATGSNDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPD 756
Query: 121 GRILVSCGTDCTVKLWNVPVA 141
++L SC D T+KLW+V A
Sbjct: 757 DQVLASCSADGTLKLWDVKSA 777
Score = 112 (44.5 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSC 324
+HMGH SAV D+SP V + ++ + G ++ + + V CV FS
Sbjct: 837 MHMGHHSAVQYCDFSPHNHLAVVALSQYCVELWSMDSGL--KVADCRGHLSWVHCVMFSP 894
Query: 325 DASYVISGSDDTNLRLWKAK 344
D S ++ SDD +RLW+ K
Sbjct: 895 DGSSFLTSSDDQTIRLWETK 914
Score = 112 (44.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 35/134 (26%), Positives = 61/134 (45%)
Query: 9 STDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIGALDGHRD- 67
S+D+ T R + ++V N L+ + V +T ++ I I G D
Sbjct: 902 SSDDQTI-RLWETKKVCKNSATVLKQEIDVVFQENEVTVLAVDNIRRLQLINGNTGQIDY 960
Query: 68 ----GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
+SC +P +L+ G DG I++ ++ N R +GH+ VR + + DG+
Sbjct: 961 LTEAQVSCCCLSP-HLQYLAFGGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKT 1019
Query: 124 LVSCGTDCTVKLWN 137
L+S D V++WN
Sbjct: 1020 LISSSDDSAVQIWN 1033
Score = 99 (39.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 38/181 (20%), Positives = 76/181 (41%)
Query: 65 HRDGI--SCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR 122
H D + +C +++ + S D ++++ + + H+ V S D +
Sbjct: 616 HTDAVYHACFSEDGQRIA---SCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDK 672
Query: 123 ILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAG 182
+ +C D VK+WN L + NS + D F
Sbjct: 673 FIATCSVDKKVKIWNSMTGELVRIYDEHSEQVN--CCHFTNNSNHLLLATGSNDYF---- 726
Query: 183 AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKV 242
+ +W+ N+ + N+ T++V RF+P + VLA+ ++D ++ L+D++ S+ RK
Sbjct: 727 --LKLWDLNQEECRNTMFGHTNSVSHCRFSP-DDQVLASCSADGTLKLWDVK-SANERKS 782
Query: 243 I 243
I
Sbjct: 783 I 783
Score = 84 (34.6 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 27/127 (21%), Positives = 57/127 (44%)
Query: 229 TLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVT 288
T+ D R+ +R + + ++ +R++++ + H+ V+ D S +F +
Sbjct: 1048 TVKDFRLLKNSRLLSWSFDGTVKVWNIITRRIEKD---FVCHQDTVLSCDISSDATKFSS 1104
Query: 289 GSYDRTIRIFQYNG-GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
S D+T +I+ + E+ K R C FS + + + +G D+ +R+W E
Sbjct: 1105 TSADKTAKIWSFELLSPLHELRGHKGCVR--CSSFSVNNTLLATGDDNGEIRIWNVSNGE 1162
Query: 348 QLGVLHP 354
L + P
Sbjct: 1163 LLHLCAP 1169
Score = 73 (30.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 40/162 (24%), Positives = 63/162 (38%)
Query: 108 HQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFW 167
H AV S DG+ + SCG D T++++ T E L +F
Sbjct: 616 HTDAVYHACFSEDGQRIASCGADKTLQVFKAE--TGEKLLEIKAHEDEVLCC-----AFS 668
Query: 168 AVDHQWEGDLFATAGA--QVDIWNHNRSQPINSFQWGTDTVISVRF-NPAEPNVLATTAS 224
A D AT +V IWN + + + ++ V F N + +LAT ++
Sbjct: 669 ADDK-----FIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSN 723
Query: 225 DRSITLYDLRMSSPARKVIMRANEDCNC-YSYDSRKLDEAKC 265
D + L+DL + N +C +S D + L A C
Sbjct: 724 DYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVL--ASC 763
Score = 69 (29.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 38/178 (21%), Positives = 80/178 (44%)
Query: 185 VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRM----SSPAR 240
V++W+ + + + V V F+P + L T++ D++I L++ + S+
Sbjct: 866 VELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFL-TSSDDQTIRLWETKKVCKNSATVL 924
Query: 241 K----VIMRANEDCNCYSYDS-RKLD--EAKCVHMGH--ESAVMDIDYSPTGREFVTGSY 291
K V+ + NE + D+ R+L + + E+ V SP + G
Sbjct: 925 KQEIDVVFQENE-VTVLAVDNIRRLQLINGNTGQIDYLTEAQVSCCCLSPHLQYLAFGGE 983
Query: 292 DRTIRIFQYNGGRSREIYHTKRMQR--VFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
D I+I + R I+ ++ + V ++F+ D +IS SDD+ +++W ++ +
Sbjct: 984 DGAIQILELLNNR---IFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQSED 1038
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 171 (65.3 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 74/307 (24%), Positives = 121/307 (39%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH+ I+ + +PN K +GS D + LW + + +Y GH+ + + S G +
Sbjct: 16 GHKAAITSVDFSPNG-KQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNL 74
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA 183
L S D T++LW +P P+ +VD +G A+A
Sbjct: 75 LASASRDRTIRLW-IP--DKRGKSSEFKAHTAPVR---------SVDFSADGQFLASASE 122
Query: 184 Q--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMS----- 236
+ +WN R + + S T V +F+P + ++ + + D++I ++D
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 237 -------------SPARKVIMRANEDCNCYSYDSR--KLDEAKCVHMGHESAVMDIDYSP 281
+P I A D +D R KL + VH G V + + P
Sbjct: 182 FSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSG---GVNCVSFHP 238
Query: 282 TGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRL 340
+G +T S D T++I GR IY + VF V FS SG D + L
Sbjct: 239 SGNYLITASSDGTLKILDLLEGRL--IYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLL 296
Query: 341 WKAKASE 347
W+ E
Sbjct: 297 WRTNFDE 303
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 176 (67.0 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 67/283 (23%), Positives = 122/283 (43%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+S K P L SG I+LWD + ++ H+G VRG+ + VS
Sbjct: 14 GLSFHPKRPWILASLHSGV----IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSG 69
Query: 128 GTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI 187
G D +K+WN + + +N W V A+ + I
Sbjct: 70 GDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFH-HENP-WIVS--------ASDDQTIRI 119
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL-----RMSSPARKV 242
WN I+ V+ F+P E +++ + + D+++ ++D+ + +SPA
Sbjct: 120 WNWQSRTCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALKKKSASPADD- 177
Query: 243 IMRANEDCNCYSYDSRKLDE-AKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYN 301
+MR ++ N + +D K V GH+ V + PT V+G+ DR +++++ N
Sbjct: 178 LMRFSQ-MNSDLFGG--VDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMN 234
Query: 302 GGRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKA 343
++ E+ + M V V F ++S S+D ++R+W A
Sbjct: 235 ETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 161 (61.7 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 47/174 (27%), Positives = 80/174 (45%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+ GH + C+A P + F +G+ D I++WD+A+ + +GH VRG+ VST
Sbjct: 168 ISGHLGWVRCIAVEPGN-EWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKH 226
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
L SCG D VK W++ + LA++ +D + AT+
Sbjct: 227 PYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHP------TID------VLATS 274
Query: 182 G--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
G + IW+ +++ T+TV SV P ++ T + D ++ L+DL
Sbjct: 275 GRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQII-TGSHDSTVRLWDL 327
Score = 52 (23.4 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 9/40 (22%), Positives = 21/40 (52%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSRE 307
M E+ + + + +G +T D+TI++++ + S E
Sbjct: 427 MDSEAGIFAMCFDQSGSRLITAEADKTIKVYKEDDEASEE 466
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 119 (46.9 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 40/185 (21%), Positives = 85/185 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RF+ ++ T + DRSI ++D+ ++
Sbjct: 248 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG---LMVTCSKDRSIAVWDMASATDI 304
Query: 240 --RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDYSP 281
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 305 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 364
Query: 282 TGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R V+GS D TIR++ G + + V C++F D ++SG+ D +++W
Sbjct: 365 --RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIKVW 419
Query: 342 KAKAS 346
+A+
Sbjct: 420 DLQAA 424
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 58 FIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
F+ L+GH+ GI+C+ + SGS D IRLWDI + GH+ VR +
Sbjct: 346 FVRTLNGHKRGIACLQYRDRLV---VSGSSDNTIRLWDIECGACLRVLEGHEELVR--CI 400
Query: 118 STDGRILVSCGTDCTVKLWNVPVA 141
D + +VS D +K+W++ A
Sbjct: 401 RFDNKRIVSGAYDGKIKVWDLQAA 424
Score = 103 (41.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 38/200 (19%), Positives = 87/200 (43%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GH + C+ + + +GS D +R+WD+ + H AV L S +G
Sbjct: 227 LTGHTGSVLCLQYDERVI---VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NG 282
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
++V+C D ++ +W++ AT AV V VD + + A+
Sbjct: 283 -LMVTCSKDRSIAVWDMASAT--DITLRRVLVGHRAAVNV-------VDFDDKYIVSASG 332
Query: 182 GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARK 241
+ +W+ + + + + + +++ ++ + +SD +I L+D+ + R
Sbjct: 333 DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTIRLWDIECGACLR- 388
Query: 242 VIMRANEDC-NCYSYDSRKL 260
++ +E+ C +D++++
Sbjct: 389 -VLEGHEELVRCIRFDNKRI 407
Score = 98 (39.6 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + + SG D I++WD ++ + +GH G+V L + D R++V+
Sbjct: 193 GVYCLQYDDDKI---ISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDERVIVTG 247
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 248 SSDSTVRVWDV 258
Score = 91 (37.1 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIYHTKRMQRVFCVKFSC 324
V +GH +AV +D+ + V+ S DRTI+++ + R + KR + C+++
Sbjct: 309 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKR--GIACLQYR- 363
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
D V+SGS D +RLW + L VL E+
Sbjct: 364 DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEE 395
Score = 58 (25.5 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGG------RSREIYHT--KRMQRVFCV 320
GHE V I + + V+G+YD I+++ S T + RVF +
Sbjct: 392 GHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL 449
Query: 321 KFSCDASYVISGSDDTNLRLW 341
+F D +IS S D + +W
Sbjct: 450 QF--DEFQIISSSHDDTILIW 468
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 132 (51.5 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 71 CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTD 130
C + + YL +G+ D IR+WDI R Q++GH+ + L + DGR + S D
Sbjct: 353 CFSPDGKYLA---TGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGD 409
Query: 131 CTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA---QVDI 187
TV+LW++ T L V+ ++ V + + AG+ V +
Sbjct: 410 RTVRLWDIENGTA-------------LTVFTIEDGVTTVAISPDTK-YVAAGSLDKSVRV 455
Query: 188 WNHNRSQPINSFQW--G-TDTVISVRFNPAEPNVLATTASDRSITLYDL 233
W+ + P+ + G D+V SV F+P + L T + D++I L++L
Sbjct: 456 WDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRD-LVTGSLDKTIKLWEL 503
Score = 119 (46.9 bits), Expect = 0.00059, P = 0.00059
Identities = 35/125 (28%), Positives = 57/125 (45%)
Query: 218 VLATTASDRSITLYDLRMS-SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMD 276
VL +D + LY + SP K + ED +D + GHE +
Sbjct: 335 VLQDDNADTTGDLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRT-IRIQFAGHEQDIYS 393
Query: 277 IDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDT 336
+D++ GR +GS DRT+R++ G + ++ + V V S D YV +GS D
Sbjct: 394 LDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIE--DGVTTVAISPDTKYVAAGSLDK 451
Query: 337 NLRLW 341
++R+W
Sbjct: 452 SVRVW 456
Score = 112 (44.5 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQY------------NGGRSREIYHTKRMQR 316
GH+ +V + +SP GR+ VTGS D+TI++++ GGR + + R
Sbjct: 472 GHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHR-DF 530
Query: 317 VFCVKFSCDASYVISGSDDTNLRLWKAKA-SEQL 349
V V + D +V+SGS D ++ W + S QL
Sbjct: 531 VLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQL 564
Score = 86 (35.3 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
+P + +M ++D +D R + + GH+++V+ + SPTG F TGS D R
Sbjct: 537 TPDNQWVMSGSKDRGVQFWDPRT-GSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRAR 595
Query: 297 IFQY 300
I+ Y
Sbjct: 596 IWSY 599
Score = 70 (29.7 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 24/133 (18%), Positives = 54/133 (40%)
Query: 112 VRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDH 171
+R + S DG+ L + D +++W++ T+ + +++D
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGH------------EQDIYSLDF 396
Query: 172 QWEGDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSIT 229
+G A+ V +W+ + F D V +V +P + +A + D+S+
Sbjct: 397 ARDGRTIASGSGDRTVRLWDIENGTALTVFTI-EDGVTTVAISP-DTKYVAAGSLDKSVR 454
Query: 230 LYDLRMSSPARKV 242
++DL P ++
Sbjct: 455 VWDLTQGCPVERL 467
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 119 (46.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 40/185 (21%), Positives = 85/185 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RF+ ++ T + DRSI ++D+ ++
Sbjct: 282 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG---LMVTCSKDRSIAVWDMASATDI 338
Query: 240 --RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDYSP 281
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 339 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 398
Query: 282 TGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R V+GS D TIR++ G + + V C++F D ++SG+ D +++W
Sbjct: 399 --RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIKVW 453
Query: 342 KAKAS 346
+A+
Sbjct: 454 DLQAA 458
Score = 103 (41.3 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 38/200 (19%), Positives = 87/200 (43%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GH + C+ + + +GS D +R+WD+ + H AV L S +G
Sbjct: 261 LTGHTGSVLCLQYDERVI---VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NG 316
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
++V+C D ++ +W++ AT AV V VD + + A+
Sbjct: 317 -LMVTCSKDRSIAVWDMASAT--DITLRRVLVGHRAAVNV-------VDFDDKYIVSASG 366
Query: 182 GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARK 241
+ +W+ + + + + + +++ ++ + +SD +I L+D+ + R
Sbjct: 367 DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTIRLWDIECGACLR- 422
Query: 242 VIMRANEDC-NCYSYDSRKL 260
++ +E+ C +D++++
Sbjct: 423 -VLEGHEELVRCIRFDNKRI 441
Score = 98 (39.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + + SG D I++WD ++ + +GH G+V L + D R++V+
Sbjct: 227 GVYCLQYDDDKI---ISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDERVIVTG 281
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 282 SSDSTVRVWDV 292
Score = 91 (37.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIYHTKRMQRVFCVKFSC 324
V +GH +AV +D+ + V+ S DRTI+++ + R + KR + C+++
Sbjct: 343 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKR--GIACLQYR- 397
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
D V+SGS D +RLW + L VL E+
Sbjct: 398 DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEE 429
Score = 58 (25.5 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGG------RSREIYHT--KRMQRVFCV 320
GHE V I + + V+G+YD I+++ S T + RVF +
Sbjct: 426 GHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL 483
Query: 321 KFSCDASYVISGSDDTNLRLW 341
+F D +IS S D + +W
Sbjct: 484 QF--DEFQIISSSHDDTILIW 502
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/174 (28%), Positives = 79/174 (45%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+ GH + C+A P + F +GS D I++WD+A+ + +GH VRG+ VST
Sbjct: 199 ISGHLGWVRCIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 257
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
L SCG D VK W++ + AVY +D D+ T
Sbjct: 258 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLS-----AVY-------GLDLHPTIDVLVTC 305
Query: 182 G--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
+ IW+ +++ T+ V +VR AEP ++ T + D +I L+DL
Sbjct: 306 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDL 358
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/174 (28%), Positives = 79/174 (45%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+ GH + C+A P + F +GS D I++WD+A+ + +GH VRG+ VST
Sbjct: 199 ISGHLGWVRCIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 257
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
L SCG D VK W++ + AVY +D D+ T
Sbjct: 258 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLS-----AVY-------GLDLHPTLDVLVTC 305
Query: 182 G--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
+ IW+ +++ T+ V +VR AEP ++ T + D +I L+DL
Sbjct: 306 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDL 358
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/174 (28%), Positives = 79/174 (45%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+ GH + C+A P + F +GS D I++WD+A+ + +GH VRG+ VST
Sbjct: 200 ISGHLGWVRCIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 258
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
L SCG D VK W++ + AVY +D D+ T
Sbjct: 259 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLS-----AVY-------GLDLHPTIDVLVTC 306
Query: 182 G--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
+ IW+ +++ T+ V +VR AEP ++ T + D +I L+DL
Sbjct: 307 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDL 359
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/174 (28%), Positives = 79/174 (45%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+ GH + C+A P + F +GS D I++WD+A+ + +GH VRG+ VST
Sbjct: 200 ISGHLGWVRCIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 258
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
L SCG D VK W++ + AVY +D D+ T
Sbjct: 259 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLS-----AVY-------GLDLHPTIDVLVTC 306
Query: 182 G--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
+ IW+ +++ T+ V +VR AEP ++ T + D +I L+DL
Sbjct: 307 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDL 359
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/174 (28%), Positives = 79/174 (45%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+ GH + C+A P + F +GS D I++WD+A+ + +GH VRG+ VST
Sbjct: 201 ISGHLGWVRCIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 259
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
L SCG D VK W++ + AVY +D D+ T
Sbjct: 260 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLS-----AVY-------GLDLHPTIDVLVTC 307
Query: 182 G--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
+ IW+ +++ T+ V +VR AEP ++ T + D +I L+DL
Sbjct: 308 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDL 360
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 119 (46.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 40/185 (21%), Positives = 85/185 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RF+ ++ T + DRSI ++D+ ++
Sbjct: 297 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG---LMVTCSKDRSIAVWDMASATDI 353
Query: 240 --RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDYSP 281
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 354 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 413
Query: 282 TGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R V+GS D TIR++ G + + V C++F D ++SG+ D +++W
Sbjct: 414 --RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIKVW 468
Query: 342 KAKAS 346
+A+
Sbjct: 469 DLQAA 473
Score = 103 (41.3 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 38/200 (19%), Positives = 87/200 (43%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GH + C+ + + +GS D +R+WD+ + H AV L S +G
Sbjct: 276 LTGHTGSVLCLQYDERVI---VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NG 331
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
++V+C D ++ +W++ AT AV V VD + + A+
Sbjct: 332 -LMVTCSKDRSIAVWDMASAT--DITLRRVLVGHRAAVNV-------VDFDDKYIVSASG 381
Query: 182 GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARK 241
+ +W+ + + + + + +++ ++ + +SD +I L+D+ + R
Sbjct: 382 DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTIRLWDIECGACLR- 437
Query: 242 VIMRANEDC-NCYSYDSRKL 260
++ +E+ C +D++++
Sbjct: 438 -VLEGHEELVRCIRFDNKRI 456
Score = 98 (39.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + + SG D I++WD ++ + +GH G+V L + D R++V+
Sbjct: 242 GVYCLQYDDDKI---ISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDERVIVTG 296
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 297 SSDSTVRVWDV 307
Score = 91 (37.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIYHTKRMQRVFCVKFSC 324
V +GH +AV +D+ + V+ S DRTI+++ + R + KR + C+++
Sbjct: 358 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKR--GIACLQYR- 412
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
D V+SGS D +RLW + L VL E+
Sbjct: 413 DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEE 444
Score = 58 (25.5 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGG------RSREIYHT--KRMQRVFCV 320
GHE V I + + V+G+YD I+++ S T + RVF +
Sbjct: 441 GHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL 498
Query: 321 KFSCDASYVISGSDDTNLRLW 341
+F D +IS S D + +W
Sbjct: 499 QF--DEFQIISSSHDDTILIW 517
>POMBASE|SPAC25H1.08c [details] [associations]
symbol:SPAC25H1.08c "ribosome biogenesis protein Sqt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.08c GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 HOGENOM:HOG000261676 GO:GO:0000027 HSSP:Q04724
KO:K14818 OrthoDB:EOG45TGWZ PIR:T38388 RefSeq:NP_593812.1
ProteinModelPortal:O13982 STRING:O13982 PRIDE:O13982
EnsemblFungi:SPAC25H1.08c.1 GeneID:2542715 KEGG:spo:SPAC25H1.08c
OMA:PICACAS NextBio:20803763 Uniprot:O13982
Length = 399
Score = 111 (44.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 65 HRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRIL 124
H+D + ++ NP + SG D +WDI +CQ +GH+ ++ + S DG +
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYI 119
Query: 125 VSCGTDCTVKLW 136
+ G D V+LW
Sbjct: 120 ATGGMDSQVRLW 131
Score = 102 (41.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 39/141 (27%), Positives = 60/141 (42%)
Query: 199 FQWGTDTVISVRFNPAEPNVLATT-ASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDS 257
F G+ + V N ++LA+ A S+ L + P + A+ D YDS
Sbjct: 259 FLGGSSGKVKV-VNINSSHILASLEAQTESVEAIALCTALP---ICACASVDGTVALYDS 314
Query: 258 RKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRV 317
L K + HE AV+D + P +T D IR + G+ Y T + +
Sbjct: 315 ASLKFRKS--LPHEQAVIDCKFLPNTPYLLTACADCVIRKWDVRSGQLLGEY-TGHQEPI 371
Query: 318 FCVKFSCDASYVISGSDDTNL 338
C+ + D V++GSDDT L
Sbjct: 372 LCMAITPDGKRVVTGSDDTEL 392
Score = 82 (33.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/135 (23%), Positives = 59/135 (43%)
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD-----LRM 235
+ +V + N N S + S + T++V ++ A P + A + D ++ LYD R
Sbjct: 263 SSGKVKVVNINSSHILASLEAQTESVEAIALCTALP-ICACASVDGTVALYDSASLKFRK 321
Query: 236 SSPARKVI------------MRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTG 283
S P + + + A DC +D R + + GH+ ++ + +P G
Sbjct: 322 SLPHEQAVIDCKFLPNTPYLLTACADCVIRKWDVRS-GQLLGEYTGHQEPILCMAITPDG 380
Query: 284 REFVTGSYDRTIRIF 298
+ VTGS D + +F
Sbjct: 381 KRVVTGSDDTELLVF 395
Score = 49 (22.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 290 SYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
S D T+ ++ + R+ Q V KF + Y+++ D +R W ++ + L
Sbjct: 304 SVDGTVALYDSASLKFRK--SLPHEQAVIDCKFLPNTPYLLTACADCVIRKWDVRSGQLL 361
Query: 350 G 350
G
Sbjct: 362 G 362
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 118 (46.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 34/111 (30%), Positives = 53/111 (47%)
Query: 260 LDEAKCVH--MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQR 316
LD C H+ +VM + + P F T D I+ Q++ + I + Q
Sbjct: 619 LDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIK--QWDADKFEHIQTLEGHHQE 676
Query: 317 VFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE-QRKHAYHEAV 366
++C+ S YV+S S D +LRLW+ + E L + RE QR+ Y E+V
Sbjct: 677 IWCLAVSPSGDYVVSASHDKSLRLWE-RTREPLILEEERELQREAEYEESV 726
Score = 104 (41.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 63 DGHRDGISCMAKNPNYLKG-FFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+GHR ++ + + L G SGS D D+ +WD+ N + + GH+ AV +
Sbjct: 104 NGHRAAVTSLKYDQ--LGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRER 161
Query: 122 RILVSCGTDCTVKLWNV 138
+LV+ G D VK W++
Sbjct: 162 NLLVTSGKDTMVKWWDL 178
Score = 90 (36.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 85 GSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
G+ G+++L+D+A+ + + H GA+ +++S D R V+ G D VK W+ + T
Sbjct: 471 GTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVT 528
Score = 84 (34.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L G + ++C+ +P+ L G DG IR++ + + ++GH+ AV L G
Sbjct: 61 LQGLKQEVTCLCPSPDGLH-LAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLG 119
Query: 122 RILVSCGTDCTVKLWNV 138
L S D V +W+V
Sbjct: 120 GRLASGSKDTDVIIWDV 136
Score = 76 (31.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 20/79 (25%), Positives = 38/79 (48%)
Query: 62 LDGHRDGIS--CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
L GH+D ++ + N L SG D ++ WD+ N+ GH+ V GL + +
Sbjct: 145 LKGHKDAVTQALFLRERNLL--VTSGK-DTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVS 201
Query: 120 DGRILVSCGTDCTVKLWNV 138
+ L++ D ++ W++
Sbjct: 202 EETRLITGAADSELRAWDI 220
Score = 46 (21.3 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 84 SGSMDGDIRLWDIA 97
+G+ D ++R WDIA
Sbjct: 208 TGAADSELRAWDIA 221
Score = 42 (19.8 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 112 VRGLTVSTDGRILVSCGTDCTVKLW 136
V L V GRIL GTD ++++
Sbjct: 282 VVNLAVDKTGRILACHGTDSVLEVF 306
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 67/283 (23%), Positives = 121/283 (42%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+S K P L SG I+LWD + ++ H+G VRG+ + VS
Sbjct: 14 GLSFHPKRPWILASLHSGV----IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSG 69
Query: 128 GTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI 187
G D +K+WN Y+ F H++ + A+ + I
Sbjct: 70 GDDYKIKVWNYKNHRCLFTLLGHLD-------YIRTVQF---HHEYPWIVSASDDQTIRI 119
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL-----RMSSPARKV 242
WN ++ V+ F+P E +++ + + D+++ ++D+ + SPA
Sbjct: 120 WNWQSRTCVSVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADD- 177
Query: 243 IMRANEDCNCYSYDSRKLDE-AKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYN 301
IMR + N + +D K V GH+ V + PT V+G+ DR +++++ N
Sbjct: 178 IMRLTQ-MNSDLFGG--VDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
Query: 302 GGRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKA 343
++ E+ + M V V F ++S S+D ++R+W A
Sbjct: 235 ETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 113 (44.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 34/111 (30%), Positives = 53/111 (47%)
Query: 260 LDEAKCVH--MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQR 316
LD C H+ +VM + + F T D I+ Q++ + I + Q
Sbjct: 615 LDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIK--QWDADKFEHIQTLEGHHQE 672
Query: 317 VFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE-QRKHAYHEAV 366
V+C+ S + YV+S S D +LRLW+ + E L + RE QR+ Y E+V
Sbjct: 673 VWCLALSPNGDYVVSASHDKSLRLWE-RTREPLILEEEREMQREAEYEESV 722
Score = 108 (43.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 61 ALDGHRDGISCMAKNPNYLKG-FFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
A +GH+ ++ + + L G SGS D D+ +WD+ N + + GH+ AV +
Sbjct: 101 AFNGHKAAVTALQYDQ--LGGRLVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLK 158
Query: 120 DGRILVSCGTDCTVKLWNV 138
+ +LV+ G D VK W++
Sbjct: 159 EKNLLVTSGKDTLVKWWDL 177
Score = 88 (36.0 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 31/101 (30%), Positives = 46/101 (45%)
Query: 38 AVEYVRALTAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIA 97
A E+V A K EK+ L G + SC+ +P+ L G DG IR++ +
Sbjct: 43 ACEHVFVWDARKGEKVLI------LKGSKHE-SCLRPSPDGLH-LAVGYEDGSIRIFSLL 94
Query: 98 NRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
+ ++GH+ AV L G LVS D V +W+V
Sbjct: 95 SGEASVAFNGHKAAVTALQYDQLGGRLVSGSKDTDVIVWDV 135
Score = 85 (35.0 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 85 GSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
G+ G ++L+D+A+ + + H GAV + +S D R V+ G D VK W+
Sbjct: 467 GTKTGKLQLYDLASGTLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWD 519
Score = 82 (33.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 28/122 (22%), Positives = 52/122 (42%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
SP +K++ + DC + + L ++ GH+ V+ +D S G TGS DR ++
Sbjct: 553 SPNQKLLAVSLLDCTVKVFYTDTLKFFLSLY-GHKLPVLCMDISYDGALIATGSADRNVK 611
Query: 297 IFQYN-GGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPR 355
I+ + G R ++ V ++F + + D ++ W A E + L
Sbjct: 612 IWGLDFGDCHRSLF--AHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDADKFEHIQTLEGH 669
Query: 356 EQ 357
Q
Sbjct: 670 HQ 671
Score = 74 (31.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 62 LDGHRDGIS--CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
L GH+D ++ K N L SG D ++ WD+ + GH+ V G+ + +
Sbjct: 144 LKGHKDAVTQVLFLKEKNLL--VTSGK-DTLVKWWDLDTQHCFKTLVGHRTEVWGMALVS 200
Query: 120 DGRILVSCGTDCTVKLWNV 138
+ + L++ D +++W++
Sbjct: 201 EEKRLITGTADSELRVWDI 219
Score = 73 (30.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 274 VMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGS 333
V+ + YSP + D T+++F + + + ++ V C+ S D + + +GS
Sbjct: 547 VLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLP-VLCMDISYDGALIATGS 605
Query: 334 DDTNLRLW 341
D N+++W
Sbjct: 606 ADRNVKIW 613
Score = 64 (27.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQY 300
H+ AV I SP R FVTG D+ ++ + +
Sbjct: 490 HDGAVWSIALSPDQRGFVTGGADKCVKFWDF 520
Score = 60 (26.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 97 ANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
A+R T+ GH+ VR L S+D I V G +VK+WN
Sbjct: 401 ASRITI---GGHRSDVRTLAFSSDN-IAVLSGAAESVKIWN 437
Score = 53 (23.7 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 103 CQYSG---HQGAVRGLTVSTD--GRILVSCGTDCTVKLWNV 138
C +G +G R +T++TD G+IL GTD +++++V
Sbjct: 266 CSKAGSIMREGRDRVVTLATDRMGKILACHGTDAVLEVFSV 306
Score = 43 (20.2 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 185 VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
V +W+ + + D V V F E N+L T+ D + +DL
Sbjct: 130 VIVWDVINESGLYRLKGHKDAVTQVLFLK-EKNLLVTSGKDTLVKWWDL 177
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 109 (43.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQ-YNGGRSREIYHTK----------RMQRV 317
GH+S+V+ D+SP VT SYD + ++ Y G R R ++HT+ + +
Sbjct: 237 GHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLSPPMDDSDVHISSL 296
Query: 318 FCVKFSCDASYVISGSDDTNLRLW 341
V FS + Y+ + +DD LR+W
Sbjct: 297 RSVCFSPEGLYLATVADDRLLRIW 320
Score = 103 (41.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR-ILVSCGTDCTVKLWNV 138
+G DG I++W++ + SGHQ VR L+ + G ILVS D T+++W++
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 183
Score = 57 (25.1 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 167 WAVDHQWEGD----LFATA--GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLA 220
WA H D + AT Q+ IW + + D V + F P+ +L
Sbjct: 111 WARHHPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILV 170
Query: 221 TTASDRSITLYDL 233
+ + D+++ ++DL
Sbjct: 171 SASRDKTLRIWDL 183
Score = 57 (25.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H S++ + +SP G T + DR +RI+ I M C F +
Sbjct: 292 HISSLRSVCFSPEGLYLATVADDRLLRIWALE--LKTPIAFAP-MTNGLCCTFFPHGGVI 348
Query: 330 ISGSDDTNLRLWKA 343
+G+ D +++ W A
Sbjct: 349 ATGTRDGHVQFWTA 362
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 109 (43.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQ-YNGGRSREIYHTK----------RMQRV 317
GH+S+V+ D+SP VT SYD + ++ Y G R R ++HT+ + +
Sbjct: 237 GHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSL 296
Query: 318 FCVKFSCDASYVISGSDDTNLRLW 341
V FS + Y+ + +DD LR+W
Sbjct: 297 RSVCFSPEGLYLATVADDRLLRIW 320
Score = 103 (41.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR-ILVSCGTDCTVKLWNV 138
+G DG I++W++ + SGHQ VR L+ + G ILVS D T+++W++
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 183
Score = 57 (25.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H S++ + +SP G T + DR +RI+ I M C F +
Sbjct: 292 HISSLRSVCFSPEGLYLATVADDRLLRIWALE--LKTPIAFAP-MTNGLCCTFFPHGGVI 348
Query: 330 ISGSDDTNLRLWKA 343
+G+ D +++ W A
Sbjct: 349 ATGTRDGHVQFWTA 362
Score = 56 (24.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 167 WAVDHQWEGDL----FATA--GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLA 220
WA H D+ AT Q+ IW + + D V + F P+ +L
Sbjct: 111 WARHHPQVPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILV 170
Query: 221 TTASDRSITLYDL 233
+ + D+++ ++DL
Sbjct: 171 SASRDKTLRIWDL 183
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 120 (47.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 45/187 (24%), Positives = 83/187 (44%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ A V +W+ + I + + V+ +RF ++ T + DRSI ++D M SP
Sbjct: 279 SSDATVRVWDVETGECIKTLIHHCEAVLHLRF---ANGIMVTCSKDRSIAVWD--MVSPR 333
Query: 240 ----RKVIMRANEDCNCYSYDSR--------------KLDEAKCVHM--GHESAVMDIDY 279
R+V++ N +D R +D + V GH + + Y
Sbjct: 334 DITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQY 393
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
GR V+GS D TIR++ + G + + V C++F D ++SG+ D ++
Sbjct: 394 R--GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHE-ELVRCIRF--DEKRIVSGAYDGKIK 448
Query: 340 LWKAKAS 346
+W +A+
Sbjct: 449 VWDLQAA 455
Score = 97 (39.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + + SG D I++WD + SGH G+V L + D R+++S
Sbjct: 224 GVYCLQYDDDKI---VSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISG 278
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 279 SSDATVRVWDV 289
Score = 96 (38.9 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQR--VFCVKFS 323
V +GH +AV +D+ R V+ S DRTI+++ + + E T R + C+++
Sbjct: 340 VLVGHRAAVNVVDFDD--RYIVSASGDRTIKVWSMD---TLEFVRTLAGHRRGIACLQYR 394
Query: 324 CDASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
V+SGS D +RLW + L VL E+
Sbjct: 395 --GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEE 426
Score = 87 (35.7 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GH + C+ + + SGS D +R+WD+ + H AV L + +G
Sbjct: 258 LSGHTGSVLCLQYDNRVI---ISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA-NG 313
Query: 122 RILVSCGTDCTVKLWNV 138
I+V+C D ++ +W++
Sbjct: 314 -IMVTCSKDRSIAVWDM 329
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 120 (47.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 45/187 (24%), Positives = 83/187 (44%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ A V +W+ + I + + V+ +RF ++ T + DRSI ++D M SP
Sbjct: 279 SSDATVRVWDVETGECIKTLIHHCEAVLHLRF---ANGIMVTCSKDRSIAVWD--MVSPR 333
Query: 240 ----RKVIMRANEDCNCYSYDSR--------------KLDEAKCVHM--GHESAVMDIDY 279
R+V++ N +D R +D + V GH + + Y
Sbjct: 334 DITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQY 393
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
GR V+GS D TIR++ + G + + V C++F D ++SG+ D ++
Sbjct: 394 R--GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHE-ELVRCIRF--DEKRIVSGAYDGKIK 448
Query: 340 LWKAKAS 346
+W +A+
Sbjct: 449 VWDLQAA 455
Score = 97 (39.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + + SG D I++WD + SGH G+V L + D R+++S
Sbjct: 224 GVYCLQYDDDKI---VSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISG 278
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 279 SSDATVRVWDV 289
Score = 96 (38.9 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQR--VFCVKFS 323
V +GH +AV +D+ R V+ S DRTI+++ + + E T R + C+++
Sbjct: 340 VLVGHRAAVNVVDFDD--RYIVSASGDRTIKVWSMD---TLEFVRTLAGHRRGIACLQYR 394
Query: 324 CDASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
V+SGS D +RLW + L VL E+
Sbjct: 395 --GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEE 426
Score = 87 (35.7 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GH + C+ + + SGS D +R+WD+ + H AV L + +G
Sbjct: 258 LSGHTGSVLCLQYDNRVI---ISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA-NG 313
Query: 122 RILVSCGTDCTVKLWNV 138
I+V+C D ++ +W++
Sbjct: 314 -IMVTCSKDRSIAVWDM 329
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 109 (43.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQ-YNGGRSREIYHTK----------RMQRV 317
GH+S+V+ D+SP VT SYD + ++ Y G R R ++HT+ + +
Sbjct: 239 GHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLNPPMDDSDVHISSL 298
Query: 318 FCVKFSCDASYVISGSDDTNLRLW 341
V FS + Y+ + +DD LR+W
Sbjct: 299 RSVCFSPEGLYLATVADDRLLRIW 322
Score = 103 (41.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR-ILVSCGTDCTVKLWNV 138
+G DG I++W++ + SGHQ VR L+ + G ILVS D T+++W++
Sbjct: 130 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 185
Score = 57 (25.1 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 167 WAVDHQWEGD----LFATA--GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLA 220
WA H D + AT Q+ IW + + D V + F P+ +L
Sbjct: 113 WARHHPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILV 172
Query: 221 TTASDRSITLYDL 233
+ + D+++ ++DL
Sbjct: 173 SASRDKTLRIWDL 185
Score = 57 (25.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H S++ + +SP G T + DR +RI+ I M C F +
Sbjct: 294 HISSLRSVCFSPEGLYLATVADDRLLRIWALE--LKTPIAFAP-MTNGLCCTFFPHGGVI 350
Query: 330 ISGSDDTNLRLWKA 343
+G+ D +++ W A
Sbjct: 351 ATGTRDGHVQFWTA 364
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 109 (43.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQ-YNGGRSREIYHTK----------RMQRV 317
GH+S+V+ D+SP VT SYD + ++ Y G R R ++HT+ + +
Sbjct: 239 GHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSL 298
Query: 318 FCVKFSCDASYVISGSDDTNLRLW 341
V FS + Y+ + +DD LR+W
Sbjct: 299 RSVCFSPEGLYLATVADDRLLRIW 322
Score = 103 (41.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR-ILVSCGTDCTVKLWNV 138
+G DG I++W++ + SGHQ VR L+ + G ILVS D T+++W++
Sbjct: 130 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 185
Score = 57 (25.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H S++ + +SP G T + DR +RI+ I M C F +
Sbjct: 294 HISSLRSVCFSPEGLYLATVADDRLLRIWALE--LKTPIAFAP-MTNGLCCTFFPHGGVI 350
Query: 330 ISGSDDTNLRLWKA 343
+G+ D +++ W A
Sbjct: 351 ATGTRDGHVQFWTA 364
Score = 56 (24.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 167 WAVDHQWEGDL----FATA--GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLA 220
WA H D+ AT Q+ IW + + D V + F P+ +L
Sbjct: 113 WARHHPQVPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILV 172
Query: 221 TTASDRSITLYDL 233
+ + D+++ ++DL
Sbjct: 173 SASRDKTLRIWDL 185
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 167 (63.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 73/297 (24%), Positives = 123/297 (41%)
Query: 61 ALDGHRDGISCMAKNPNYL----KGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLT 116
AL GH I+ ++ P + + S S DG +R+WD R +GH +V L
Sbjct: 194 ALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLR 253
Query: 117 VSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAV---YVWKNSFW-----A 168
DG +L S D T+K+W L +A+ Y + + +
Sbjct: 254 WGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEAS 312
Query: 169 VDHQ-WEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNV-LATTASDR 226
V+ Q G L + +N R + + G+D ++PAE LA +
Sbjct: 313 VNAQDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQ 372
Query: 227 SITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREF 286
+ L + + SP ++I A+ D + +D R + GH +AV I +S R
Sbjct: 373 A--LINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLR-GHVAAVYQIAWSADSRLL 429
Query: 287 VTGSYDRTIRIFQYNGGR-SREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
V+GS D T++++ + + ++ V+ V +S D V SG D LR+W+
Sbjct: 430 VSGSSDSTLKVWDVKAQKLAADL--PGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 129 (50.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 37/163 (22%), Positives = 81/163 (49%)
Query: 196 INSFQWGTDTVISV-RFNPAEPNVLATTA-------SDRSITLYDLRMSSPARKVIMRAN 247
+N+ TD + F PAE +V A +R+++ Y+L +++ +
Sbjct: 290 VNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGRGLERLVS-GS 348
Query: 248 EDCNCYSYDSRKLDEAKCVHM-GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSR 306
+D + + + D+ M GH++ + + +SP R + S+D++I+++ GR+
Sbjct: 349 DDFTLFLWSPAE-DKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWD---GRTG 404
Query: 307 EIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
+ + R + V+ + +S D+ ++SGS D+ L++W KA +
Sbjct: 405 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK 447
Score = 63 (27.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 100 RTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
R GH AV + S G+ L S D TV+ W++ T
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTET 147
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 109 (43.4 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQ-YNGGRSREIYHTK----------RMQRV 317
GH+S+V+ D+SP VT SYD + ++ Y G R R ++HT+ + +
Sbjct: 254 GHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSL 313
Query: 318 FCVKFSCDASYVISGSDDTNLRLW 341
V FS + Y+ + +DD LR+W
Sbjct: 314 RSVCFSPEGLYLATVADDRLLRIW 337
Score = 103 (41.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR-ILVSCGTDCTVKLWNV 138
+G DG I++W++ + SGHQ VR L+ + G ILVS D T+++W++
Sbjct: 145 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 200
Score = 57 (25.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H S++ + +SP G T + DR +RI+ I M C F +
Sbjct: 309 HISSLRSVCFSPEGLYLATVADDRLLRIWALE--LKTPIAFAP-MTNGLCCTFFPHGGVI 365
Query: 330 ISGSDDTNLRLWKA 343
+G+ D +++ W A
Sbjct: 366 ATGTRDGHVQFWTA 379
Score = 56 (24.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 167 WAVDHQWEGDL----FATA--GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLA 220
WA H D+ AT Q+ IW + + D V + F P+ +L
Sbjct: 128 WARHHPQVPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILV 187
Query: 221 TTASDRSITLYDL 233
+ + D+++ ++DL
Sbjct: 188 SASRDKTLRIWDL 200
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 166 (63.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 70/313 (22%), Positives = 136/313 (43%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQY-SGHQGAVRGLT-----V 117
GHR + ++ +P+ K SG +G I LWD + + V + +GH + GL+
Sbjct: 105 GHRHWVLSISWSPDG-KTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHA 163
Query: 118 STDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDL 177
+ + R + S D +V++W+ L W D G L
Sbjct: 164 NPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLR--------WGGD----GLL 211
Query: 178 F-ATAGAQVDIWN-HN---------RSQPINSFQWGTDTVISV-RFNPAEPNVLATTAS- 224
+ A+ + +W H+ +N+ TD + F PAE ++ A
Sbjct: 212 YSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQG 271
Query: 225 ------DRSITLYDL-RMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHM-GHESAVMD 276
DR++ Y+L R P R ++ ++D + + + D+ M GH++ +
Sbjct: 272 SLQELKDRALRRYNLVRGQGPER--LVSGSDDFTLFMWSPAE-DKKPLARMTGHQALINQ 328
Query: 277 IDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKR--MQRVFCVKFSCDASYVISGSD 334
+ +SP R + S+D++I+++ GR+ + + R + V+ + +S D+ ++SGS
Sbjct: 329 VLFSPDSRIIASASFDKSIKLWD---GRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSS 385
Query: 335 DTNLRLWKAKASE 347
D+ L++W KA +
Sbjct: 386 DSTLKVWDVKAQK 398
Score = 161 (61.7 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 72/296 (24%), Positives = 122/296 (41%)
Query: 62 LDGHRDGISCMAKNPNYL----KGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
L GH I+ ++ P + + S S DG +R+WD R +GH +V L
Sbjct: 146 LAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 205
Query: 118 STDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAV---YVWKNSFW-----AV 169
DG +L S D T+K+W L +A+ Y + + ++
Sbjct: 206 GGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASI 264
Query: 170 DHQ-WEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNV-LATTASDRS 227
+ Q +G L + +N R Q G+D ++PAE LA ++
Sbjct: 265 NAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQA 324
Query: 228 ITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV 287
L + + SP ++I A+ D + +D R + GH +AV I +S R V
Sbjct: 325 --LINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLR-GHVAAVYQIAWSADSRLLV 381
Query: 288 TGSYDRTIRIFQYNGGR-SREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
+GS D T++++ + + ++ V+ V +S D V SG D LR+W+
Sbjct: 382 SGSSDSTLKVWDVKAQKLAADL--PGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 435
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 130 (50.8 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 71 CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTD 130
C + + YL +G+ D IR+WDIA R +SGH+ + L + +GR + S D
Sbjct: 323 CFSPDGKYLA---TGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGD 379
Query: 131 CTVKLWNVP----VATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVD 186
TV+LW++ V TL P +YV S W+ T G V+
Sbjct: 380 KTVRLWDIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWD----TTTGYLVE 435
Query: 187 IWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRA 246
R + + + D+V SV F P L + + D++I L++L + P R+ A
Sbjct: 436 -----RLENPDGHK---DSVYSVAFAP-NGKELVSGSLDKTIKLWELNL--P-RQQYNSA 483
Query: 247 NEDCNCY-SYDSRK 259
+ C+ +++ K
Sbjct: 484 GKGGKCHRTFEGHK 497
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 47/182 (25%), Positives = 77/182 (42%)
Query: 218 VLATTASDRSITLYDLRMS-SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMD 276
VL + D+S LY + SP K + ED +D K + GHE +
Sbjct: 305 VLQDESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRT-IKHIFSGHEQDIYS 363
Query: 277 IDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDT 336
+D++ GR +GS D+T+R++ G+ +Y V V S D YV +GS D
Sbjct: 364 LDFAGNGRYIASGSGDKTVRLWDIAEGKL--VYTLSIEDGVTTVAMSPDGLYVAAGSLDK 421
Query: 337 NLRLWKAKASEQLGVL-HPREQRKHAYHEAVKNRYKHLPE--IKRIVR--HRHLPKPIYK 391
+R+W + L +P + Y A K L + + ++ +LP+ Y
Sbjct: 422 TVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYN 481
Query: 392 AA 393
+A
Sbjct: 482 SA 483
Score = 111 (44.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIF-------QYNG-GRSREIYHTKRMQR--VF 318
GH+ +V + ++P G+E V+GS D+TI+++ QYN G+ + + T + V
Sbjct: 442 GHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVL 501
Query: 319 CVKFSCDASYVISGSDDTNLRLW 341
V + D +V+SGS D ++ W
Sbjct: 502 SVCLTPDGHWVMSGSKDRGVQFW 524
Score = 83 (34.3 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
+M ++D +D A+ + GH+++V+ + SPTG F TGS D RI++Y+
Sbjct: 512 VMSGSKDRGVQFWDPIT-GNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWRYSA 570
Query: 303 GRSR 306
R
Sbjct: 571 YTGR 574
Score = 52 (23.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 112 VRGLTVSTDGRILVSCGTDCTVKLWNVPVATL 143
+R + S DG+ L + D +++W++ T+
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTI 350
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 123 (48.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RFN ++ T + DRSI ++D M+SP
Sbjct: 261 SSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWD--MASPT 315
Query: 240 ----RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDY 279
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 316 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 375
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
R V+GS D TIR++ G + + V C++F D ++SG+ D ++
Sbjct: 376 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIK 430
Query: 340 LWKAKAS 346
+W A+
Sbjct: 431 VWDLMAA 437
Score = 91 (37.1 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIYHTKRMQRVFCVKFSC 324
V +GH +AV +D+ + V+ S DRTI+++ + R + KR + C+++
Sbjct: 322 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYR- 376
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
D V+SGS D +RLW + L VL E+
Sbjct: 377 DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEE 408
Score = 89 (36.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + SG D I++WD + +GH G+V L + D R++++
Sbjct: 206 GVYCLQYDDQKI---VSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITG 260
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 261 SSDSTVRVWDV 271
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 169 (64.5 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 63/264 (23%), Positives = 111/264 (42%)
Query: 83 FSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
FS SMD IR+WD+ + + V GH AV L + DG L+S G D +WN+
Sbjct: 170 FSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRE 229
Query: 143 LXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQ 200
E + + F + + +G F TAG++ + +W + + S Q
Sbjct: 230 -SIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKVWEVATAACVYS-Q 287
Query: 201 WGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKL 260
V F P E AS+ S+T M P R I+ + + N YD++ L
Sbjct: 288 -------PVPFEPVESE---EEASEHSLTHC---MLVPERNEIVTVSVEHNIVFYDAQTL 334
Query: 261 DEAKCVHMGHESAVMDIDY-SPTGREFVTGSYDRTIRIFQYNGGRSREIY-HTKRMQRVF 318
K + G+ V+D+ + P V + +++F+ + + +Y HT + +
Sbjct: 335 QLRKQL-AGYNDEVLDVKFLGPGDSHIVVATNSPQLKVFELSTSHCQILYGHT---ETIL 390
Query: 319 CVKFSCDASYVISGSDDTNLRLWK 342
+ +S + D ++R+W+
Sbjct: 391 ALDVFRKGLMFVSCAKDKSIRVWR 414
Score = 109 (43.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 47/186 (25%), Positives = 81/186 (43%)
Query: 62 LDGHRDGISCMAKNPNYLKG--FFSGSMDGDIRLWDI-ANRRTVC--QYSGHQGAVRGLT 116
L GH + I + + KG F S + D IR+W + + R VC Q GH V ++
Sbjct: 382 LYGHTETILALDV---FRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVS 438
Query: 117 VST-DGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNS----FWAVDH 171
S +V+ DCT+K+WN+P + E L + + +V
Sbjct: 439 CSRLKESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAV 498
Query: 172 QWEGDLFATAGAQ---VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSI 228
L AT G+Q +W+ + F + V+F+P + +LAT+++D ++
Sbjct: 499 SPNDKLIAT-GSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVD-QILATSSADGTL 556
Query: 229 TLYDLR 234
L+ L+
Sbjct: 557 KLWGLQ 562
Score = 64 (27.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/87 (19%), Positives = 43/87 (49%)
Query: 260 LDEAKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK--RMQ 315
L + C+ GH+++V+ I + G + ++G D ++++ ++ E T
Sbjct: 561 LQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTI---KTNECVKTLDGHED 617
Query: 316 RVFCVKFSCDASYVISGSDDTNLRLWK 342
+++ + + V++ S D+++ LWK
Sbjct: 618 KIWGLHTNKQDDMVVTASSDSSITLWK 644
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 118 (46.6 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 35/112 (31%), Positives = 55/112 (49%)
Query: 260 LDEAKCVH---MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQ 315
LD C H H+ +VM + + P F T DR I+ Q++ + I + Q
Sbjct: 620 LDFGDC-HKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIK--QWDADKFEHIQTLEGHHQ 676
Query: 316 RVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE-QRKHAYHEAV 366
++C+ S YV+S S D +LRLW+ + E L + +E QR+ Y E+V
Sbjct: 677 EIWCLAVSPSGDYVVSSSHDKSLRLWE-RTREPLILEEEKEMQREAEYEESV 727
Score = 101 (40.6 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 63 DGHRDGISCMAKNPNYLKG-FFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+GH+ I+ + + L G SGS D DI +WD+ N + + GH+ A+ +
Sbjct: 104 NGHKAAITSLKYDQ--LGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREK 161
Query: 122 RILVSCGTDCTVKLWNV 138
+LV+ G D VK W++
Sbjct: 162 NLLVTSGKDTMVKWWDL 178
Score = 87 (35.7 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 85 GSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
G+ G ++L+D+A+ + H GA+ L++S D R V+ G D +VK W+
Sbjct: 472 GTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWD 524
Score = 83 (34.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L G + ++C+ +P+ L G DG IR++ + + ++GH+ A+ L G
Sbjct: 61 LQGLKHEVTCLCPSPDGLH-LAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKYDQLG 119
Query: 122 RILVSCGTDCTVKLWNV 138
L S D + +W+V
Sbjct: 120 GRLASGSKDTDIIVWDV 136
Score = 76 (31.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 62 LDGHRDGIS--CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
L GH+D I+ + N L SG D ++ WD+ + GH+ V GL + +
Sbjct: 145 LKGHKDAITQALFLREKNLL--VTSGK-DTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVS 201
Query: 120 DGRILVSCGTDCTVKLWNV 138
+ + L++ +D ++ W++
Sbjct: 202 EEKRLITGASDSELRAWDI 220
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 165 (63.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 75/302 (24%), Positives = 120/302 (39%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH+ I+ + +P+ K + S D + LW+ + +Y GH+ V + S G +
Sbjct: 16 GHKAAITSVDFSPSG-KQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNL 74
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA 183
L S D TV+LW +P P+ +VD +G ATA
Sbjct: 75 LASASRDRTVRLW-IP--DKRGKSSEFKAHTAPVR---------SVDFSADGQFLATASE 122
Query: 184 Q--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMS----- 236
+ +WN R + + S T V +F+P + ++ + + D++I ++D
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 237 -------------SPARKVIMRANEDCNCYSYDSR--KLDEAKCVHMGHESAVMDIDYSP 281
+P I A D +D R KL + VH G V + + P
Sbjct: 182 FSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSG---GVNCVSFHP 238
Query: 282 TGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRL 340
+G +T S D T++I GR IY + VF V FS SG DT + L
Sbjct: 239 SGNYIITASSDGTLKILDLLEGRL--IYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLL 296
Query: 341 WK 342
W+
Sbjct: 297 WR 298
Score = 147 (56.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 57/262 (21%), Positives = 110/262 (41%)
Query: 64 GHRDGISCMAKNP--NYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
GH+D ++ + +P N L S S D +RLW R ++ H VR + S DG
Sbjct: 58 GHKDVVTSVQFSPLGNLLA---SASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADG 114
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQW--EGDLFA 179
+ L + D ++K+WN+ + +++++ W ++ +G L
Sbjct: 115 QFLATASEDKSIKVWNM--------------YRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 180 TAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSS 237
+ + IW+ Q +N+F V FNP +A+ SD ++ ++D+R++
Sbjct: 161 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNP-NGTCIASAGSDHTVKIWDIRVNK 219
Query: 238 PARKVIMRANEDCNCYSY------------DS--RKLD--EAKCVH--MGHESAVMDIDY 279
+ + + NC S+ D + LD E + ++ GH V + +
Sbjct: 220 LLQHYQVHSG-GVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 278
Query: 280 SPTGREFVTGSYDRTIRIFQYN 301
S G F +G D + +++ N
Sbjct: 279 SKGGELFSSGGADTQVLLWRTN 300
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 64/260 (24%), Positives = 108/260 (41%)
Query: 105 YSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVATLXXXXXXXXXXXEPLAVYVW- 162
+ GH+ A+ + S G+ L + D + LWN P A YV
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFR--------------YVGH 59
Query: 163 KNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLA 220
K+ +V G+L A+A V +W ++ + F+ T V SV F+ A+ LA
Sbjct: 60 KDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFS-ADGQFLA 118
Query: 221 TTASDRSIT---------LYDL-------RMS--SPARKVIMRANEDCNCYSYDSRKLDE 262
T + D+SI LY L R + SP ++I+ +ED +D+
Sbjct: 119 TASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN--- 175
Query: 263 AKCVHMGHESAVMD--IDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCV 320
+CV+ +S +D++P G + D T++I+ + + Y V CV
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQV-HSGGVNCV 234
Query: 321 KFSCDASYVISGSDDTNLRL 340
F +Y+I+ S D L++
Sbjct: 235 SFHPSGNYIITASSDGTLKI 254
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 106 (42.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQ-YNGGRSREIYHTK----------RMQRV 317
GH+S+V+ D+SP VT SYD + ++ Y G R R ++HT+ + +
Sbjct: 239 GHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRLLHHTQLDPPMDDSDVHISSL 298
Query: 318 FCVKFSCDASYVISGSDDTNLRLW 341
V FS + Y+ + +DD LR+W
Sbjct: 299 RSVCFSPEGLYLATVADDRLLRIW 322
Score = 103 (41.3 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR-ILVSCGTDCTVKLWNV 138
+G DG I++W++ + SGHQ VR L+ + G ILVS D T+++W++
Sbjct: 130 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 185
Score = 57 (25.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 167 WAVDHQWEGDL----FATA--GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLA 220
WA H D+ AT Q+ IW + + D V + F P+ +L
Sbjct: 113 WARHHPQVPDISCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILV 172
Query: 221 TTASDRSITLYDL 233
+ + D+++ ++DL
Sbjct: 173 SASRDKTLRIWDL 185
Score = 57 (25.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H S++ + +SP G T + DR +RI+ I M C F +
Sbjct: 294 HISSLRSVCFSPEGLYLATVADDRLLRIWALE--LKTPIAFAP-MTNGLCCTFFPHGGVI 350
Query: 330 ISGSDDTNLRLWKA 343
+G+ D +++ W A
Sbjct: 351 ATGTRDGHVQFWTA 364
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 149 (57.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 55 ARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRG 114
A + L GH+ I + +P Y + SGS D +I+LWDI + V +Y GH AVR
Sbjct: 98 AAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 156
Query: 115 LTVSTDGRILVSCGTDCTVKLWNV 138
L S DG+ L S D TVKLW++
Sbjct: 157 LRFSPDGKWLASAADDHTVKLWDL 180
Score = 128 (50.1 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 36/139 (25%), Positives = 74/139 (53%)
Query: 215 EPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVH--MGHES 272
+PN + + S + +R+++P ++I+ ++ + +D L+ AK + MGH++
Sbjct: 56 KPNCIMSLTGHTS-PVESVRLNTP-EELIVAGSQSGSIRVWD---LEAAKILRTLMGHKA 110
Query: 273 AVMDIDYSPTGREFV-TGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVI 330
+ +D+ P G EFV +GS D I+++ R ++ + Q V C++FS D ++
Sbjct: 111 NICSLDFHPYG-EFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLA 167
Query: 331 SGSDDTNLRLWKAKASEQL 349
S +DD ++LW A + +
Sbjct: 168 SAADDHTVKLWDLTAGKMM 186
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 65/269 (24%), Positives = 110/269 (40%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATL 143
S S DG +R+WD R +GH +V L DG +L S D T+K+W L
Sbjct: 221 SSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVL 279
Query: 144 XXXXXXXXXXXEPLAV---YVWKNSFW-----AVDHQ-WEGDLFATAGAQVDIWNHNRSQ 194
+A+ Y + + +V+ Q +G L + +N R Q
Sbjct: 280 CRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVRGQ 339
Query: 195 PINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYS 254
G+D ++PAE T + + + + SP +++ A+ D +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQV-LFSPDSRIVASASFDKSIKL 398
Query: 255 YDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGR-SREIYHTKR 313
+D R + GH +AV I +S R V+GS D T++++ + + ++
Sbjct: 399 WDGRTGKYLASLR-GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDL--PGH 455
Query: 314 MQRVFCVKFSCDASYVISGSDDTNLRLWK 342
V+ V +S D V SG D LR+W+
Sbjct: 456 ADEVYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 70/313 (22%), Positives = 138/313 (44%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQ-YSGHQGAVRGLT-----V 117
GHR + ++ +P+ K SG +G I LWD + + V + +GH + GL+
Sbjct: 154 GHRHWVLSISWSPDGRK-LASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHA 212
Query: 118 STDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDL 177
+ + R + S D +V++W+ L W D G L
Sbjct: 213 NPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLR--------WGGD----GLL 260
Query: 178 F-ATAGAQVDIWN-HN---------RSQPINSFQWGTDTVISV-RFNPAEPNV----LAT 221
+ A+ + +W H+ +N+ TD + F PAE +V L
Sbjct: 261 YSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQG 320
Query: 222 TASD---RSITLYDL-RMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHM-GHESAVMD 276
+ + R+++ Y+L R P R ++ ++D + + + D+ M GH++ +
Sbjct: 321 SLQELKERALSRYNLVRGQGPER--LVSGSDDFTLFLWSPAE-DKKPLTRMTGHQALINQ 377
Query: 277 IDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKR--MQRVFCVKFSCDASYVISGSD 334
+ +SP R + S+D++I+++ GR+ + + R + V+ + +S D+ ++SGS
Sbjct: 378 VLFSPDSRIVASASFDKSIKLWD---GRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSS 434
Query: 335 DTNLRLWKAKASE 347
D+ L++W KA +
Sbjct: 435 DSTLKVWDVKAQK 447
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 123 (48.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RFN ++ T + DRSI ++D M+SP
Sbjct: 360 SSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWD--MASPT 414
Query: 240 ----RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDY 279
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 474
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
R V+GS D TIR++ G + + V C++F D ++SG+ D ++
Sbjct: 475 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIK 529
Query: 340 LWKAKAS 346
+W A+
Sbjct: 530 VWDLMAA 536
Score = 91 (37.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIYHTKRMQRVFCVKFSC 324
V +GH +AV +D+ + V+ S DRTI+++ + R + KR + C+++
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYR- 475
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
D V+SGS D +RLW + L VL E+
Sbjct: 476 DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEE 507
Score = 89 (36.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + SG D I++WD + +GH G+V L + D R++++
Sbjct: 305 GVYCLQYDDQKI---VSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITG 359
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 360 SSDSTVRVWDV 370
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 123 (48.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RFN ++ T + DRSI ++D M+SP
Sbjct: 360 SSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWD--MASPT 414
Query: 240 ----RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDY 279
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 474
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
R V+GS D TIR++ G + + V C++F D ++SG+ D ++
Sbjct: 475 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIK 529
Query: 340 LWKAKAS 346
+W A+
Sbjct: 530 VWDLMAA 536
Score = 91 (37.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIYHTKRMQRVFCVKFSC 324
V +GH +AV +D+ + V+ S DRTI+++ + R + KR + C+++
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYR- 475
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
D V+SGS D +RLW + L VL E+
Sbjct: 476 DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEE 507
Score = 89 (36.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + SG D I++WD + +GH G+V L + D R++++
Sbjct: 305 GVYCLQYDDQKI---VSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITG 359
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 360 SSDSTVRVWDV 370
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 121 (47.7 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 43/182 (23%), Positives = 83/182 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RFN ++ T + DRSI ++D M+SP
Sbjct: 261 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWD--MASPT 315
Query: 240 ----RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDY 279
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 316 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 375
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
R V+GS D TIR++ G + + V C++F D ++SG+ D ++
Sbjct: 376 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIK 430
Query: 340 LW 341
+W
Sbjct: 431 VW 432
Score = 91 (37.1 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIYHTKRMQRVFCVKFSC 324
V +GH +AV +D+ + V+ S DRTI+++ + R + KR + C+++
Sbjct: 322 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYR- 376
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
D V+SGS D +RLW + L VL E+
Sbjct: 377 DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEE 408
Score = 89 (36.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + SG D I++WD + +GH G+V L + D R++++
Sbjct: 206 GVYCLQYDDQKI---VSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITG 260
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 261 SSDSTVRVWDV 271
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 116 (45.9 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 34/111 (30%), Positives = 53/111 (47%)
Query: 260 LDEAKCVH--MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQR 316
LD C H+ +VM + + P F T D I+ Q++ + I + Q
Sbjct: 619 LDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIK--QWDADKFEHIQTLEGHHQE 676
Query: 317 VFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE-QRKHAYHEAV 366
++C+ S YV+S S D +LRLW+ + E L + RE QR+ Y E+V
Sbjct: 677 IWCLAVSPSGDYVVSASHDKSLRLWE-RTREPLILEEEREMQREAEYEESV 726
Score = 101 (40.6 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 63 DGHRDGISCMAKNPNYLKG-FFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+GH+ ++ + + L G SGS D D+ +WD+ N + + GH+ AV +
Sbjct: 104 NGHKAAVTSLKYDQ--LGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRER 161
Query: 122 RILVSCGTDCTVKLWNV 138
+LV+ G D VK W++
Sbjct: 162 NLLVTSGKDTMVKWWDL 178
Score = 90 (36.7 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 85 GSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
G+ G+++L+D+A+ + + H GA+ +++S D R V+ G D VK W+ + T
Sbjct: 471 GTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVT 528
Score = 89 (36.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L G++ ++C+ +P+ L G DG IR++ + + ++GH+ AV L G
Sbjct: 61 LQGNKQEVTCLCPSPDGLH-LAVGYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQLG 119
Query: 122 RILVSCGTDCTVKLWNV 138
L S D V +W+V
Sbjct: 120 GRLASGSKDTDVIIWDV 136
Score = 79 (32.9 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 62 LDGHRDGIS--CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
L GH+D ++ + N L SG D ++ WD+ N+ GH+ V GL + +
Sbjct: 145 LKGHKDAVTQALFLRERNLL--VTSGK-DTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVS 201
Query: 120 DGRILVSCGTDCTVKLWNV 138
+ + L++ D ++ W++
Sbjct: 202 EEKRLITGAADSELRAWDI 220
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 116 (45.9 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 34/112 (30%), Positives = 53/112 (47%)
Query: 260 LDEAKCVH---MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQ 315
LD C H H+ +VM + + P F T D I+ Q++ + I + Q
Sbjct: 620 LDFGDC-HKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIK--QWDADKFEHIQTLEGHHQ 676
Query: 316 RVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQRKHA-YHEAV 366
++C+ S YV+S S D +LRLW+ + E L + RE + A Y E+V
Sbjct: 677 EIWCLAVSPSGDYVVSSSHDKSLRLWE-RTREPLILEEEREMEREAEYEESV 727
Score = 101 (40.6 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 63 DGHRDGISCMAKNPNYLKG-FFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+GH+ I+ + + L G SGS D DI +WD+ N + + GH+ A+ +
Sbjct: 104 NGHKAAITTLKYDQ--LGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREK 161
Query: 122 RILVSCGTDCTVKLWNV 138
+LV+ G D VK W++
Sbjct: 162 NLLVTSGKDTMVKWWDL 178
Score = 85 (35.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 85 GSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
G+ G ++L+D+A+ + H GA+ +++S D R V+ G D +VK W+
Sbjct: 472 GTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWD 524
Score = 82 (33.9 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L G + ++C+ +P+ L G DG IR++ + + ++GH+ A+ L G
Sbjct: 61 LQGLKQEVTCLCPSPDGLH-LAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLG 119
Query: 122 RILVSCGTDCTVKLWNV 138
L S D + +W+V
Sbjct: 120 GRLASGSKDTDIIVWDV 136
Score = 78 (32.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 62 LDGHRDGIS--CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
L GH+D I+ + N L SG D ++ WD+ + GH+ V GL + +
Sbjct: 145 LKGHKDAITQALFLREKNLL--VTSGK-DTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLS 201
Query: 120 DGRILVSCGTDCTVKLWNV 138
+ + L++ +D +++W++
Sbjct: 202 EEKRLITGASDSELRVWDI 220
Score = 51 (23.0 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 80 KGFFSGSMDGDIRLWDIA 97
K +G+ D ++R+WDIA
Sbjct: 204 KRLITGASDSELRVWDIA 221
Score = 45 (20.9 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 112 VRGLTVSTDGRILVSCGTDCTVKLW 136
V L V GRIL GTD ++L+
Sbjct: 282 VVNLAVDKTGRILACHGTDSVLELF 306
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 150 (57.9 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 52/188 (27%), Positives = 88/188 (46%)
Query: 49 KLEKIFARPF--IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYS 106
KLEK + + I GH DG++C+ N YL +GS D I++W I + V +
Sbjct: 364 KLEKNWRKGTHTIKTFTGHSDGVTCLQFNRKYL---MTGSYDTTIKIWKIDSGECVKTLT 420
Query: 107 GHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVW-KNS 165
GH VR L D + L+S G D T+K+WN + +A Y +++
Sbjct: 421 GHTKGVRALVF--DNQKLISGGLDSTIKVWNYHTG-------------QCIATYRGHEDA 465
Query: 166 FWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASD 225
+VD + + +A V +W H S+ + + TD V V+ + A N + + + D
Sbjct: 466 VVSVDFTNKSIVSGSADHTVRVW-HVDSRTCYTLRGHTDWVNHVKIHSAS-NTIFSASDD 523
Query: 226 RSITLYDL 233
+I ++D+
Sbjct: 524 TTIRMWDM 531
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 48/190 (25%), Positives = 84/190 (44%)
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRAN 247
W + I +F +D V ++FN L T + D +I ++ + S K +
Sbjct: 369 WRKG-THTIKTFTGHSDGVTCLQFNR---KYLMTGSYDTTIKIWKID-SGECVKTLTGHT 423
Query: 248 EDCNCYSYDSRKL-----DEA---------KCV--HMGHESAVMDIDYSPTGREFVTGSY 291
+ +D++KL D +C+ + GHE AV+ +D+ T + V+GS
Sbjct: 424 KGVRALVFDNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDF--TNKSIVSGSA 481
Query: 292 DRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLG 350
D T+R++ + SR Y + V VK ++ + S SDDT +R+W ++E +
Sbjct: 482 DHTVRVWHVD---SRTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIK 538
Query: 351 VLHPREQRKH 360
V E H
Sbjct: 539 VFGGMENNGH 548
Score = 114 (45.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 46 TAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQY 105
T K+ KI + + L GH G+ + + L SG +D I++W+ + + Y
Sbjct: 403 TTIKIWKIDSGECVKTLTGHTKGVRALVFDNQKL---ISGGLDSTIKVWNYHTGQCIATY 459
Query: 106 SGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
GH+ AV ++V + +VS D TV++W+V T
Sbjct: 460 RGHEDAV--VSVDFTNKSIVSGSADHTVRVWHVDSRT 494
Score = 62 (26.9 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 264 KCVH--MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVK 321
KC+ GH V I + T R ++G++DR I+++ G+ + V CV
Sbjct: 659 KCIRTQFGHIEGVWSIA-ADTFR-IISGAHDRLIKVWDLQNGKCLHTFSNN--SSVSCVG 714
Query: 322 FSCDASYVISGSDDTNLRLW 341
S D+ +V +G ++ ++++
Sbjct: 715 LS-DSRFV-AGLENGEVKMY 732
Score = 53 (23.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 281 PTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRL 340
PT F+T + D TI+++ G+ ++ V+ + + D +ISG+ D +++
Sbjct: 638 PT--HFLTSALDNTIKLWDVATGKCIRTQFG-HIEGVWSI--AADTFRIISGAHDRLIKV 692
Query: 341 W 341
W
Sbjct: 693 W 693
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 164 (62.8 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 68/296 (22%), Positives = 125/296 (42%)
Query: 67 DGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVS 126
D + C+ + + SGS D + +WD+ +R + + GH G+V L +LVS
Sbjct: 222 DSVYCVQYDDEIM---VSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVS 278
Query: 127 CGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAV--DHQ---WEGDLFATA 181
+D T+ +W+ L V V +N + DH W D + A
Sbjct: 279 GSSDSTIIIWDWQ--NRRPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPA 336
Query: 182 GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARK 241
A + + + + +NS Q+ + T ++ T +SDR++ +D+ R
Sbjct: 337 EACMHVLRGHLAS-VNSVQYSSKT-----------GLIVTASSDRTLRTWDITTGHCIR- 383
Query: 242 VIMRANEDCNCYSYDSR-----------KLDEA---KCVHM--GHESAVMDIDYSPTGRE 285
+I C Y+ + ++ EA K + M GHE + + ++ +
Sbjct: 384 IIHAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFND--EK 441
Query: 286 FVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
V+G YD T+RI+ +N G + H R RVF ++F D +I+ + + + +W
Sbjct: 442 IVSGGYDGTVRIWNFNTGEQHCVLHNSRNSRVFGLQF--DHRRIIACTHSSEILVW 495
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 47/213 (22%), Positives = 95/213 (44%)
Query: 164 NSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTA 223
+S + V + E + + V +W+ N + + +V+ + F N+L + +
Sbjct: 222 DSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRR-NLLVSGS 280
Query: 224 SDRSITLYDLRMSSPAR----------------KVIMRANED--CNCYSYDSRKLDEAKC 265
SD +I ++D + P + I+ ++ D + D+ EA C
Sbjct: 281 SDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEA-C 339
Query: 266 VHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
+H+ GH ++V + YS VT S DRT+R + G I H + + + C +++
Sbjct: 340 MHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQ-RGIACAQYN 398
Query: 324 CDASYVISGSDDTNLRLWKAKASEQLGVLHPRE 356
+++SGS D +R+++A + + L +L E
Sbjct: 399 --GKFIVSGSSDLTIRIFEASSGKLLRMLQGHE 429
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 57/260 (21%), Positives = 104/260 (40%)
Query: 117 VSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGD 176
V D I+VS D TV +W+V + +Y S +D +
Sbjct: 227 VQYDDEIMVSGSKDRTVSVWDVNSRFILYK------------LYGHSGSVLCLDFCRRRN 274
Query: 177 LFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLR 234
L + + + IW+ +P+ + TD V+ V N + +++ D + ++ L
Sbjct: 275 LLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGV---VVSENYIISSSRDHTARVWRLD 331
Query: 235 MSSPARKV--IMRAN-EDCNCYSYDSRK----------------LDEAKCVHM--GHESA 273
+SPA ++R + N Y S+ + C+ + H+
Sbjct: 332 ATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRG 391
Query: 274 VMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGS 333
+ Y+ G+ V+GS D TIRIF+ + G+ + + V+F+ + ++SG
Sbjct: 392 IACAQYN--GKFIVSGSSDLTIRIFEASSGKLLRMLQGHE-DLIRTVRFNDEK--IVSGG 446
Query: 334 DDTNLRLWKAKASEQLGVLH 353
D +R+W EQ VLH
Sbjct: 447 YDGTVRIWNFNTGEQHCVLH 466
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 122 (48.0 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RFN ++ T + DRSI ++D M+SP
Sbjct: 324 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWD--MASPT 378
Query: 240 ----RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDY 279
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 379 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 438
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
R V+GS D TIR++ G + + V C++F D ++SG+ D ++
Sbjct: 439 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIK 493
Query: 340 LWKAKAS 346
+W A+
Sbjct: 494 VWDLVAA 500
Score = 91 (37.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIYHTKRMQRVFCVKFSC 324
V +GH +AV +D+ + V+ S DRTI+++ + R + KR + C+++
Sbjct: 385 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYR- 439
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
D V+SGS D +RLW + L VL E+
Sbjct: 440 DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEE 471
Score = 89 (36.4 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + SG D I++WD + +GH G+V L + D R++++
Sbjct: 269 GVYCLQYDDQKI---VSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITG 323
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 324 SSDSTVRVWDV 334
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 118 (46.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
I + GH +S +A PN S S D I++W++ V ++GH+ VR + +
Sbjct: 17 IRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 75
Query: 119 TDGRILVSCGTDCTVKLWNV 138
DG ++ SC D TV++W V
Sbjct: 76 QDGTLIASCSNDQTVRVWVV 95
Score = 112 (44.5 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 36/177 (20%), Positives = 86/177 (48%)
Query: 175 GDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD 232
GD +A + +W + +F + V VR N + ++A+ ++D+++ ++
Sbjct: 36 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWV 94
Query: 233 LRMSSPARKVIMRANE---DCNCYSYDSR--KLDEAKCVHMGHESAVMDIDYSPTGREFV 287
+ ++ K +R +E +C ++ +S + EA +GH++ V + + G+ +
Sbjct: 95 V--ATKECKAELREHEHVVECISWAPESSYSSISEATGSEVGHDNWVRGVLFHSGGKFIL 152
Query: 288 TGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
+ + D+T+R++ Y R + + V + F A YV++GS D +++W+ +
Sbjct: 153 SCADDKTLRVWDYKNKRCMKTLNAHE-HFVTSLDFHKTAPYVVTGSVDQTVKVWECR 208
Score = 83 (34.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 86 SMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
S D I+LWD + GH V + + +G +VS D T+K+W V
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 53
Score = 53 (23.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 320 VKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE 356
V F +++S +DD LR+W K + L+ E
Sbjct: 142 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 178
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 117 (46.2 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 43/187 (22%), Positives = 85/187 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RF ++ T + DRSI ++D M+SP
Sbjct: 282 SSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNG---LMVTCSKDRSIAVWD--MASPT 336
Query: 240 ----RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDY 279
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 337 DISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 396
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
R V+GS D TIR++ G + + V C++F D ++SG+ D ++
Sbjct: 397 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIK 451
Query: 340 LWKAKAS 346
+W +A+
Sbjct: 452 VWDLQAA 458
Score = 93 (37.8 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + SG D I++WD + +GH G+V L + D R++V+
Sbjct: 227 GVYCLQYDDEKI---ISGLRDNSIKIWDKQTLECLKILTGHTGSV--LCLQYDERVIVTG 281
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 282 SSDSTVRVWDV 292
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 168 (64.2 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 63/290 (21%), Positives = 125/290 (43%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+S K P L +G I+LWD + ++ H G VRG+ + VS
Sbjct: 14 GLSFHPKRPWILTSLHNGV----IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSG 69
Query: 128 GTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI 187
G D +K+WN + Y+ + +F+ ++ W L A+ + +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLD-------YI-RTTFFHHEYPWI--LSASDDQTIRV 119
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRAN 247
WN + V+ +F+P+E +++ + + D+++ ++D+ S +K +
Sbjct: 120 WNWQSRTCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDI--SGLRKKNLSPGA 176
Query: 248 EDCNCYSYDSRKL---DEAKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
+ + L +A H+ GH+ V + PT V+G+ DR ++I++ N
Sbjct: 177 VESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 303 GRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
++ E+ + V C F ++S S+D ++R+W S++ GV
Sbjct: 237 SKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM--SKRTGV 284
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 137 (53.3 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
SGS DG++RLWD+A T ++ GH V + STD R +VS D T+KLWN
Sbjct: 80 SGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Score = 126 (49.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 63 DGHRDGISCMAKNPNYL-KGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
DGH++ +SC+ +PN L S S D +++W++ N + GH G + + VS DG
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDG 205
Query: 122 RILVSCGTDCTVKLWNV 138
+ S G D + LW++
Sbjct: 206 SLCASGGKDGVILLWDL 222
Score = 64 (27.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 21/85 (24%), Positives = 38/85 (44%)
Query: 269 GHESAVMDIDYSPTGR--EFVTGSYDRTIRIFQYNGGRSRE--IYHTKRMQRVFCVKFSC 324
GH+ V + +SP V+ S+D+T++++ + R + H+ + V S
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTV---AVSP 203
Query: 325 DASYVISGSDDTNLRLWKAKASEQL 349
D S SG D + LW ++L
Sbjct: 204 DGSLCASGGKDGVILLWDLAEGKKL 228
Score = 54 (24.1 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH + + SP G +G D I ++ G+ ++Y + + + FS +
Sbjct: 190 VGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHSLCFSPNR- 246
Query: 328 YVISGSDDTNLRLW 341
Y + + + ++R+W
Sbjct: 247 YWLCAATENSIRIW 260
Score = 45 (20.9 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 317 VFC--VKFSCDASYVISGSDDTNLRLW 341
++C + +S D S + SG D +R+W
Sbjct: 295 IYCTSLNWSADGSTLFSGYTDGVVRVW 321
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 122 (48.0 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RFN ++ T + DRSI ++D M+SP
Sbjct: 360 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWD--MASPT 414
Query: 240 ----RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDY 279
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 474
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
R V+GS D TIR++ G + + V C++F D ++SG+ D ++
Sbjct: 475 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIK 529
Query: 340 LWKAKAS 346
+W A+
Sbjct: 530 VWDLVAA 536
Score = 91 (37.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIYHTKRMQRVFCVKFSC 324
V +GH +AV +D+ + V+ S DRTI+++ + R + KR + C+++
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYR- 475
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
D V+SGS D +RLW + L VL E+
Sbjct: 476 DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEE 507
Score = 89 (36.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + SG D I++WD + +GH G+V L + D R++++
Sbjct: 305 GVYCLQYDDQKI---VSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITG 359
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 360 SSDSTVRVWDV 370
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 168 (64.2 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 63/290 (21%), Positives = 125/290 (43%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+S K P L +G I+LWD + ++ H G VRG+ + VS
Sbjct: 14 GLSFHPKRPWILTSLHNGV----IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSG 69
Query: 128 GTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI 187
G D +K+WN + Y+ + +F+ ++ W L A+ + +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLD-------YI-RTTFFHHEYPWI--LSASDDQTIRV 119
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRAN 247
WN + V+ +F+P+E +++ + + D+++ ++D+ S +K +
Sbjct: 120 WNWQSRTCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDI--SGLRKKNLSPGA 176
Query: 248 EDCNCYSYDSRKL---DEAKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
+ + L +A H+ GH+ V + PT V+G+ DR ++I++ N
Sbjct: 177 VESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 303 GRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
++ E+ + V C F ++S S+D ++R+W S++ GV
Sbjct: 237 SKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM--SKRTGV 284
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 149 (57.5 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 55 ARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRG 114
A + L GH+ I + +P Y + SGS D +I+LWDI + V +Y GH AVR
Sbjct: 94 AAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 115 LTVSTDGRILVSCGTDCTVKLWNV 138
L S DG+ L S D TVKLW++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDL 176
Score = 128 (50.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 36/139 (25%), Positives = 74/139 (53%)
Query: 215 EPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVH--MGHES 272
+PN + + S + +R+++P ++I+ ++ + +D L+ AK + MGH++
Sbjct: 52 KPNCIMSLTGHTS-PVESVRLNTP-EELIVAGSQSGSIRVWD---LEAAKILRTLMGHKA 106
Query: 273 AVMDIDYSPTGREFV-TGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVI 330
+ +D+ P G EFV +GS D I+++ R ++ + Q V C++FS D ++
Sbjct: 107 NICSLDFHPYG-EFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 331 SGSDDTNLRLWKAKASEQL 349
S +DD ++LW A + +
Sbjct: 164 SAADDHTVKLWDLTAGKMM 182
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 168 (64.2 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 63/290 (21%), Positives = 125/290 (43%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+S K P L +G I+LWD + ++ H G VRG+ + VS
Sbjct: 14 GLSFHPKRPWILTSLHNGV----IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSG 69
Query: 128 GTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI 187
G D +K+WN + Y+ + +F+ ++ W L A+ + +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLD-------YI-RTTFFHHEYPWI--LSASDDQTIRV 119
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRAN 247
WN + V+ +F+P+E +++ + + D+++ ++D+ S +K +
Sbjct: 120 WNWQSRTCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDI--SGLRKKNLSPGA 176
Query: 248 EDCNCYSYDSRKL---DEAKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
+ + L +A H+ GH+ V + PT V+G+ DR ++I++ N
Sbjct: 177 VESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 303 GRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
++ E+ + V C F ++S S+D ++R+W S++ GV
Sbjct: 237 SKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM--SKRTGV 284
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 168 (64.2 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 63/290 (21%), Positives = 125/290 (43%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+S K P L +G I+LWD + ++ H G VRG+ + VS
Sbjct: 14 GLSFHPKRPWILTSLHNGV----IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSG 69
Query: 128 GTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI 187
G D +K+WN + Y+ + +F+ ++ W L A+ + +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLD-------YI-RTTFFHHEYPWI--LSASDDQTIRV 119
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRAN 247
WN + V+ +F+P+E +++ + + D+++ ++D+ S +K +
Sbjct: 120 WNWQSRTCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDI--SGLRKKNLSPGA 176
Query: 248 EDCNCYSYDSRKL---DEAKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
+ + L +A H+ GH+ V + PT V+G+ DR ++I++ N
Sbjct: 177 VESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 303 GRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
++ E+ + V C F ++S S+D ++R+W S++ GV
Sbjct: 237 SKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM--SKRTGV 284
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 168 (64.2 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 63/290 (21%), Positives = 125/290 (43%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+S K P L +G I+LWD + ++ H G VRG+ + VS
Sbjct: 14 GLSFHPKRPWILTSLHNGV----IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSG 69
Query: 128 GTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI 187
G D +K+WN + Y+ + +F+ ++ W L A+ + +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLD-------YI-RTTFFHHEYPWI--LSASDDQTIRV 119
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRAN 247
WN + V+ +F+P+E +++ + + D+++ ++D+ S +K +
Sbjct: 120 WNWQSRTCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDI--SGLRKKNLSPGA 176
Query: 248 EDCNCYSYDSRKL---DEAKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
+ + L +A H+ GH+ V + PT V+G+ DR ++I++ N
Sbjct: 177 VESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 303 GRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
++ E+ + V C F ++S S+D ++R+W S++ GV
Sbjct: 237 SKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM--SKRTGV 284
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 168 (64.2 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 63/290 (21%), Positives = 125/290 (43%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+S K P L +G I+LWD + ++ H G VRG+ + VS
Sbjct: 14 GLSFHPKRPWILTSLHNGV----IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSG 69
Query: 128 GTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI 187
G D +K+WN + Y+ + +F+ ++ W L A+ + +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLD-------YI-RTTFFHHEYPWI--LSASDDQTIRV 119
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRAN 247
WN + V+ +F+P+E +++ + + D+++ ++D+ S +K +
Sbjct: 120 WNWQSRTCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDI--SGLRKKNLSPGA 176
Query: 248 EDCNCYSYDSRKL---DEAKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
+ + L +A H+ GH+ V + PT V+G+ DR ++I++ N
Sbjct: 177 VESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 303 GRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
++ E+ + V C F ++S S+D ++R+W S++ GV
Sbjct: 237 SKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM--SKRTGV 284
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 45/151 (29%), Positives = 67/151 (44%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATL 143
SGS D +RLWD A GH G V + S DGR+L S D TV+LW+ +L
Sbjct: 712 SGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSL 771
Query: 144 XXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQW 201
W S V +G L A+ V +W+ + +
Sbjct: 772 QQTLRGHSN---------WVRS---VAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRG 819
Query: 202 GTDTVISVRFNPAEPNVLATTASDRSITLYD 232
+DTV SV F+P + +LA+ + D+++ L+D
Sbjct: 820 HSDTVRSVAFSP-DGRLLASGSFDKTVRLWD 849
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/82 (37%), Positives = 42/82 (51%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GH + + +A +P+ + SGS D +RLWD A GH VR + S DG
Sbjct: 775 LRGHSNWVRSVAFSPDG-RLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDG 833
Query: 122 RILVSCGTDCTVKLWNVPVATL 143
R+L S D TV+LW+ TL
Sbjct: 834 RLLASGSFDKTVRLWDPATGTL 855
Score = 123 (48.4 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 30/82 (36%), Positives = 42/82 (51%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L+GH + +A +P+ + SGS D +RLWD A GH VR + S DG
Sbjct: 733 LEGHSGWVLSVAFSPDG-RLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDG 791
Query: 122 RILVSCGTDCTVKLWNVPVATL 143
R+L S D TV+LW+ +L
Sbjct: 792 RLLASGSFDKTVRLWDPATGSL 813
Score = 92 (37.4 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASY 328
GH V + +SP GR +GS+D+T+R++ G ++ K V ++FS D SY
Sbjct: 819 GHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGT--VTELQFSQDGSY 876
Query: 329 VISGSDDTNLR 339
+ + N++
Sbjct: 877 ISTNLGSLNIQ 887
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 122 (48.0 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RFN ++ T + DRSI ++D M+SP
Sbjct: 319 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWD--MASPT 373
Query: 240 ----RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDY 279
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 374 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 433
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
R V+GS D TIR++ G + + V C++F D ++SG+ D ++
Sbjct: 434 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIK 488
Query: 340 LWKAKAS 346
+W A+
Sbjct: 489 VWDLVAA 495
Score = 91 (37.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIYHTKRMQRVFCVKFSC 324
V +GH +AV +D+ + V+ S DRTI+++ + R + KR + C+++
Sbjct: 380 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYR- 434
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
D V+SGS D +RLW + L VL E+
Sbjct: 435 DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEE 466
Score = 87 (35.7 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTV-CQ--YSGHQGAVRGLTVSTDGRIL 124
G+ C+ + + SG D I++WD + T+ C+ +GH G+V L + D R++
Sbjct: 264 GVYCLQYDDQKI---VSGLRDNTIKIWD---KNTLECKRILTGHTGSV--LCLQYDERVI 315
Query: 125 VSCGTDCTVKLWNV 138
++ +D TV++W+V
Sbjct: 316 ITGSSDSTVRVWDV 329
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 167 (63.8 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 63/290 (21%), Positives = 124/290 (42%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+S K P L +G I+LWD + ++ H G VRG+ + VS
Sbjct: 14 GLSFHPKRPWILTSLHNGV----IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSG 69
Query: 128 GTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI 187
G D +K+WN + Y+ + +F+ ++ W L A+ + +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLD-------YI-RTTFFHHEYPWI--LSASDDQTIRV 119
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRAN 247
WN + V+ +F+P E +++ + + D+++ ++D+ S +K +
Sbjct: 120 WNWQSRTCVCVLTGHNHYVMCAQFHPTE-DLVVSASLDQTVRVWDI--SGLRKKNLSPGA 176
Query: 248 EDCNCYSYDSRKL---DEAKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
+ + L +A H+ GH+ V + PT V+G+ DR ++I++ N
Sbjct: 177 VESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 303 GRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
++ E+ + V C F ++S S+D ++R+W S++ GV
Sbjct: 237 SKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM--SKRTGV 284
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 167 (63.8 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 64/291 (21%), Positives = 124/291 (42%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+S K P L +G I+LWD + ++ H G VRG+ + VS
Sbjct: 14 GLSFHPKRPWILASLHNGV----IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSG 69
Query: 128 GTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI 187
G D +K+WN + Y+ + +F+ ++ W L A+ + I
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLD-------YI-RTTFFHHEYPWI--LSASDDQTIRI 119
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRAN 247
WN + V+ +F+P+E +++ + + D+++ ++D+ S +K +
Sbjct: 120 WNWQSRTCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDI--SGLRKKNLSPGA 176
Query: 248 EDCNCYSYDSRKL---DEAKCVHM---GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYN 301
D L +A H+ GH+ V + P+ V+G+ DR ++I++ N
Sbjct: 177 VDTEVRGISGVDLFGASDAVVKHVLEQGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMN 236
Query: 302 GGRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
++ E+ + V C F ++S S+D ++R+W S++ GV
Sbjct: 237 ESKAWELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM--SKRTGV 285
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 120 (47.3 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 59 IGALDGHRDGISC--MAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLT 116
+ + D H + ++C N N+L +GS D ++LWD+ + GH +V
Sbjct: 428 VQSYDEHSEQVNCCHFTNNSNHLL-LATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCR 486
Query: 117 VSTDGRILVSCGTDCTVKLWNVPVA 141
S D ++L SC D T+KLW+V A
Sbjct: 487 FSPDDKLLASCSADGTLKLWDVKSA 511
Score = 104 (41.7 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 40/183 (21%), Positives = 77/183 (42%)
Query: 82 FFSGSMDG-DIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPV 140
F G + G +++ ++ N R + H+ VR + +TDG+ ++S D +++WN
Sbjct: 720 FVLGDVYGHSLKVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQS 779
Query: 141 ATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQ 200
+ + KNS W D V +WN + F
Sbjct: 780 EETVSLQAHQETVKD---FRLLKNSRLL---SWSFD------GTVKVWNIITGRIEKDFV 827
Query: 201 WGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDC-NC--YSYDS 257
DTV+S +P + ++T++D++ ++ + SP + +R ++ C C +S DS
Sbjct: 828 CHQDTVLSCDISP-DATKFSSTSADKTAKIWSFDLLSPLHE--LRGHKGCVRCSAFSVDS 884
Query: 258 RKL 260
L
Sbjct: 885 TLL 887
Score = 102 (41.0 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 40/183 (21%), Positives = 79/183 (43%)
Query: 65 HRDGI--SCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR 122
H D + +C +++ + S D ++++ + + H+ V S D R
Sbjct: 350 HTDAVYHACFSEDGQRIA---SCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDR 406
Query: 123 ILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAG 182
+ +C D VK+WN L + NS +H L AT
Sbjct: 407 FIATCSVDKKVKIWNSVTGELVQSYDEHSEQVN--CCHFTNNS----NHL----LLATGS 456
Query: 183 AQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
+ + +W+ N+ + N+ T++V RF+P + +LA+ ++D ++ L+D++ S+ R
Sbjct: 457 SDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSP-DDKLLASCSADGTLKLWDVK-SANER 514
Query: 241 KVI 243
K I
Sbjct: 515 KSI 517
Score = 95 (38.5 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 23/81 (28%), Positives = 40/81 (49%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG-GRSREIYHTKRMQRVFCVKFSCDASY 328
H+ V+ D SP +F + S D+T +I+ ++ E+ K R C FS D++
Sbjct: 829 HQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVR--CSAFSVDSTL 886
Query: 329 VISGSDDTNLRLWKAKASEQL 349
+ +G D+ +R+W E L
Sbjct: 887 LATGDDNGEIRIWNVSNGELL 907
Score = 83 (34.3 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 42/162 (25%), Positives = 64/162 (39%)
Query: 108 HQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFW 167
H AV S DG+ + SCG D T++++ T E L +F
Sbjct: 350 HTDAVYHACFSEDGQRIASCGADKTLQVFKAE--TGEKLLEIKAHEDEVLCC-----AFS 402
Query: 168 AVDHQWEGDLFATAGA--QVDIWNHNRSQPINSFQWGTDTVISVRF-NPAEPNVLATTAS 224
A D AT +V IWN + + S+ ++ V F N + +LAT +S
Sbjct: 403 ADDR-----FIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSS 457
Query: 225 DRSITLYDLRMSSPARKVIMRANEDCNC-YSYDSRKLDEAKC 265
D + L+DL + N +C +S D + L A C
Sbjct: 458 DYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLL--ASC 497
Score = 81 (33.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 80 KGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
K S S D I++W+ + TV HQ V+ + + R+L S D TVK+WN+
Sbjct: 761 KNVISSSDDSAIQVWNWQSEETV-SLQAHQETVKDFRLLKNSRLL-SWSFDGTVKVWNI 817
Score = 76 (31.8 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 27/125 (21%), Positives = 52/125 (41%)
Query: 236 SSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGS-YDRT 294
S P K + A + C + + M + + M T FV G Y +
Sbjct: 670 SQPGEKELKVATGEEFCLQIKRAASPQKRKKKMIPDQSFMVSCIQGTSECFVLGDVYGHS 729
Query: 295 IRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHP 354
+++ + R + T+ V ++F+ D VIS SDD+ +++W ++ E + +
Sbjct: 730 LKVLELLNNRLFQS-RTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETVSLQAH 788
Query: 355 REQRK 359
+E K
Sbjct: 789 QETVK 793
Score = 57 (25.1 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTG--SY--DRTIRIFQYNGGRSREIYHTKRMQRVFCVK 321
+H GH S + D+SP+ V Y ++ + G R++ ++K V C
Sbjct: 571 IHTGHHSTIQYCDFSPSNHLAVVALSQYCVEKRGKFIWLPGSLERKLDYSKHFFTVLCCV 630
Query: 322 F 322
F
Sbjct: 631 F 631
Score = 56 (24.8 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDI--ANRR 100
GH + +S +P+ K S S DG ++LWD+ AN R
Sbjct: 477 GHTNSVSHCRFSPDD-KLLASCSADGTLKLWDVKSANER 514
Score = 49 (22.3 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 270 HESAVMDIDYSPTGREFVT-GSYDRTIRIFQYNGGRSREIYHT 311
H V D+ +SP G+ V+ G Y ++ + + G+S + ++T
Sbjct: 922 HGGWVTDLRFSPDGKMLVSAGGY---LKWWNVDSGKSIQTFYT 961
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 162 (62.1 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 49/174 (28%), Positives = 78/174 (44%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+ GH + C+A P + F +GS D I++WD+A+ + +GH VRG+ VS
Sbjct: 202 ISGHLGWVRCIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARS 260
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
L SCG D VK W++ + AVY +D D+ T
Sbjct: 261 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLS-----AVY-------GLDLHPTIDVLVTC 308
Query: 182 G--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
+ IW+ +++ T+ V +V+ AEP V+ T + D +I L+DL
Sbjct: 309 SRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVV-TGSHDTTIRLWDL 361
Score = 117 (46.2 bits), Expect = 0.00078, P = 0.00078
Identities = 62/272 (22%), Positives = 113/272 (41%)
Query: 61 ALDGHRD---GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
+L GH G+ A++P YL FS D ++ WD+ + + Y GH AV GL +
Sbjct: 243 SLTGHISTVRGVIVSARSP-YL---FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDL 298
Query: 118 STDGRILVSCGTDCTVKLWNV----PVATLXXXXXXXXXXX-EPLAVYVWKNSFWAVDHQ 172
+LV+C D T ++W+V V TL + V S
Sbjct: 299 HPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRL 358
Query: 173 WEGDLFATAGAQVDIWNHNRS------QPIN-SFQWGT-DTVISVRFNPAEPNVLATTAS 224
W DL A +V + NH +S P + +F G+ D + +F P + N + +
Sbjct: 359 W--DLVA-GKTRVTLTNHKKSVRAVILHPRHYTFASGSPDNIKQWKF-P-DGNFIQNLSG 413
Query: 225 DRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVH-------MGHESAVMDI 277
+I + L ++S V++ ++ + +D R + VH + ES +
Sbjct: 414 HNAI-INTLTVNSDG--VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFAC 470
Query: 278 DYSPTGREFVTGSYDRTIRIFQYNGGRSREIY 309
+ + +T D+TI++++ + + E +
Sbjct: 471 VFDQSESRLLTAEADKTIKVYKEDDTATEETH 502
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 115 (45.5 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 229 TLYDLRMSSPARKVIMRANEDCNCYSYDSRKL--DEAKCVHMGHESAVMDIDYSPTGRE- 285
+ +DL S P +I+ A+ D N YD R + K ++GH V +S T
Sbjct: 303 SFFDLSYS-PLNGMIITASPDKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWSTTNEYL 361
Query: 286 FVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
FV+G+YD ++++ Y ++ +V +S + Y++SG D +R++K++
Sbjct: 362 FVSGAYDNRVKLWDYRSPKAPIFELIGHEDKVLACDWS-NPKYILSGGSDNAVRVFKSR 419
Score = 75 (31.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK--RMQRVFCVKFSCDA 326
G++S D+ YSP +T S D+ +R++ + +T Q V ++S
Sbjct: 300 GNKS-FFDLSYSPLNGMIITASPDKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWSTTN 358
Query: 327 SYV-ISGSDDTNLRLW 341
Y+ +SG+ D ++LW
Sbjct: 359 EYLFVSGAYDNRVKLW 374
Score = 68 (29.0 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLW 94
GH G+ C+A NP + SGSMD +++W
Sbjct: 197 GHERGVGCIAVNPAKTQ-MASGSMDTMLKIW 226
Score = 60 (26.2 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 98 NRRT-VCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
N RT V +GH+ V G+ D + +C D T+KLW++
Sbjct: 249 NVRTPVVTLAGHREFVSGVQW-IDNTTIATCSWDHTIKLWDL 289
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 122 (48.0 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RFN ++ T + DRSI ++D M+SP
Sbjct: 360 SSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWD--MASPT 414
Query: 240 ----RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDY 279
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 474
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
R V+GS D TIR++ G + + V C++F D ++SG+ D ++
Sbjct: 475 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIK 529
Query: 340 LWKAKAS 346
+W A+
Sbjct: 530 VWDLVAA 536
Score = 91 (37.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIYHTKRMQRVFCVKFSC 324
V +GH +AV +D+ + V+ S DRTI+++ + R + KR + C+++
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYR- 475
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
D V+SGS D +RLW + L VL E+
Sbjct: 476 DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEE 507
Score = 87 (35.7 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTV-CQ--YSGHQGAVRGLTVSTDGRIL 124
G+ C+ + + SG D I++WD + T+ C+ +GH G+V L + D R++
Sbjct: 305 GVYCLQYDDQKI---VSGLRDNTIKIWD---KNTLECKRILTGHTGSV--LCLQYDERVI 356
Query: 125 VSCGTDCTVKLWNV 138
++ +D TV++W+V
Sbjct: 357 ITGSSDSTVRVWDV 370
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 122 (48.0 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ N + +N+ + V+ +RFN ++ T + DRSI ++D M+SP
Sbjct: 360 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWD--MASPT 414
Query: 240 ----RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDY 279
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 474
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
R V+GS D TIR++ G + + V C++F D ++SG+ D ++
Sbjct: 475 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIK 529
Query: 340 LWKAKAS 346
+W A+
Sbjct: 530 VWDLVAA 536
Score = 91 (37.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIYHTKRMQRVFCVKFSC 324
V +GH +AV +D+ + V+ S DRTI+++ + R + KR + C+++
Sbjct: 421 VLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYR- 475
Query: 325 DASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
D V+SGS D +RLW + L VL E+
Sbjct: 476 DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEE 507
Score = 87 (35.7 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTV-CQ--YSGHQGAVRGLTVSTDGRIL 124
G+ C+ + + SG D I++WD + T+ C+ +GH G+V L + D R++
Sbjct: 305 GVYCLQYDDQKI---VSGLRDNTIKIWD---KNTLECKRILTGHTGSV--LCLQYDERVI 356
Query: 125 VSCGTDCTVKLWNV 138
++ +D TV++W+V
Sbjct: 357 ITGSSDSTVRVWDV 370
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 146 (56.5 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 33/84 (39%), Positives = 46/84 (54%)
Query: 55 ARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRG 114
A + L GH+ I + +P Y SGS+D DI+LWD+ + + +Y H AVR
Sbjct: 94 AAKILRTLLGHKANICSLDFHP-YGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRC 152
Query: 115 LTVSTDGRILVSCGTDCTVKLWNV 138
L S DG+ L S D TVKLW++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDL 176
Score = 119 (46.9 bits), Expect = 0.00066, P = 0.00066
Identities = 39/150 (26%), Positives = 77/150 (51%)
Query: 202 GTDTVISVRFNPAEPN-VLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKL 260
G D ++V ++ +PN V++ T I L++S+ ++I+ ++ + +D L
Sbjct: 40 GDDCRVNV-WSVNKPNCVMSLTGHTTPIE--SLQISAK-EELIVAGSQSGSIRVWD---L 92
Query: 261 DEAKCVH--MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRV 317
+ AK + +GH++ + +D+ P G +GS D I+++ R I+ K Q V
Sbjct: 93 EAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR--RKGCIFKYKSHTQAV 150
Query: 318 FCVKFSCDASYVISGSDDTNLRLWKAKASE 347
C++FS D ++ S +DD ++LW A +
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Score = 104 (41.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 34/171 (19%), Positives = 69/171 (40%)
Query: 65 HRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRIL 124
H +S + + + +G D + +W + V +GH + L +S ++
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 125 VSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ 184
V+ ++++W++ A + K + ++D G A+
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGH------------KANICSLDFHPYGSFVASGSLD 126
Query: 185 VDI--WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
DI W+ R I ++ T V +RF+P + LA+ A D ++ L+DL
Sbjct: 127 TDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDL 176
Score = 62 (26.9 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 19/73 (26%), Positives = 32/73 (43%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASY 328
GH V +++ P+ +GS DRTIR + + V C+ F+ D
Sbjct: 187 GHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATP-VRCILFNPDGCC 245
Query: 329 VISGSDDTNLRLW 341
+ G D+ LR++
Sbjct: 246 LYGGFQDS-LRVY 257
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 146 (56.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 48/174 (27%), Positives = 73/174 (41%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+ GH + +A PN + F SG+ D I++W++A +GH VRGL VS
Sbjct: 139 ISGHLGWVRSLAVEPNN-EWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRH 197
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
L SCG D VK W++ + LA++ DL T
Sbjct: 198 PYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHP------------RLDLLVTG 245
Query: 182 GAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
G +W+ I+ T TV V+ A+P V+ T + D ++ L+DL
Sbjct: 246 GRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVI-TGSLDATVRLWDL 298
Score = 57 (25.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 271 ESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY 309
E+ +M + TG +TG D+TI++++ + + E +
Sbjct: 401 EAGIMTSTFDRTGLRLITGEADKTIKVWKQDDQATPETH 439
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 48/174 (27%), Positives = 77/174 (44%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+ GH + +A P + F +GS D I++WD+A+ + +GH VRG+ VS
Sbjct: 204 ISGHLGWVRSIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRS 262
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
L SCG D VK W++ + AVY +D D+ T
Sbjct: 263 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLS-----AVY-------DLDLHPTIDVLVTC 310
Query: 182 G--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
A +W+ +++ T+TV +V+ AEP V+ + D +I L+DL
Sbjct: 311 SRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDL 364
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 121 (47.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
++G D ++ +A +P+ K FS IR+WD+ + + + GH+G V G+ G
Sbjct: 56 IEGESDTLTALALSPDD-KLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASG 114
Query: 122 RILVSCGTDCTVKLWNV 138
+L + G D V +W+V
Sbjct: 115 GLLATAGADRKVLVWDV 131
Score = 105 (42.0 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 64 GHRDGISCMAKNPNYLKGFF-SGSMDGDIRLWDIANRRTV--CQ--YSGHQGAVRGLTVS 118
GH+ +S + +P+ K SGS D +R+WD+ + T C H AV + +S
Sbjct: 142 GHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALS 201
Query: 119 TDGRILVSCGTDCTVKLWNV 138
DG L S G D V LW++
Sbjct: 202 EDGLTLFSAGRDKVVNLWDL 221
Score = 91 (37.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 22/92 (23%), Positives = 42/92 (45%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDA 326
GH+ + +++S + +T S D+T++I+ + G + + HT + R F D
Sbjct: 539 GHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRA---SFITDG 595
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVLHPREQR 358
+ +S D L+LW SE + E +
Sbjct: 596 TQFVSCGADGLLKLWNVNTSECIATYDQHEDK 627
Score = 85 (35.0 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 21/82 (25%), Positives = 42/82 (51%)
Query: 62 LDGHRDGI----SCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
L GH++ + +C++ + N L +GS D +RLW+ ++ + +GH G + +
Sbjct: 397 LAGHKEVVLSLDTCVSSSGNVL--IVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAF 454
Query: 118 STDG-RILVSCGTDCTVKLWNV 138
+ VS D T+K+W++
Sbjct: 455 AKKSFSFFVSGSGDRTLKVWSL 476
Score = 81 (33.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 90 DIRLWDIANRRTVCQY--SGHQGAVRGLT--VSTDGRILVSCGT-DCTVKLWN 137
++R++D+A C Y +GH+ V L VS+ G +L+ G+ D TV+LWN
Sbjct: 382 EVRVYDVATMS--CSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWN 432
Score = 65 (27.9 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 29/133 (21%), Positives = 59/133 (44%)
Query: 223 ASDRSITL-YDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMG--HESAVMDIDY 279
A + + L D +SS +I+ ++D +++ C+ +G H ++ + +
Sbjct: 398 AGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATS---KSCIGVGTGHNGDILAVAF 454
Query: 280 SPTGREF-VTGSYDRTIRIFQYNG--GRSREIYHTKRMQRVFC-------VKFSCDASYV 329
+ F V+GS DRT++++ +G S E + K V V + + S V
Sbjct: 455 AKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLV 514
Query: 330 ISGSDDTNLRLWK 342
+GS+D +W+
Sbjct: 515 CTGSEDRTASIWR 527
Score = 63 (27.2 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 35/136 (25%), Positives = 60/136 (44%)
Query: 174 EGDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLY 231
+G F + GA + +WN N S+ I ++ D V ++ + ++AT D I L+
Sbjct: 594 DGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGK-KTEMIATGGGDAVINLW 652
Query: 232 DLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSY 291
S+ + K ED D RK +EA E+AV+D +Y+ R +
Sbjct: 653 --HDSTASDK------ED------DFRKEEEAILRGQELENAVLDAEYTKAIR--LAFEL 696
Query: 292 DRTIRIFQYNGGRSRE 307
R ++F+ G R+
Sbjct: 697 CRPHKVFELFSGLCRK 712
Score = 62 (26.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/80 (22%), Positives = 35/80 (43%)
Query: 262 EAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVK 321
+ + V H+ + + + TGS DRT I++ + +R+F V+
Sbjct: 490 KTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPD-LVHVVTLKGHKRRIFSVE 548
Query: 322 FSCDASYVISGSDDTNLRLW 341
FS V++ S D +++W
Sbjct: 549 FSTVDQCVMTASGDKTVKIW 568
Score = 58 (25.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 319 CVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
CV S + +++GS D +RLW A + +GV
Sbjct: 410 CVSSSGNV-LIVTGSKDKTVRLWNATSKSCIGV 441
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 68/302 (22%), Positives = 130/302 (43%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDI-ANRRTVCQYSGHQGAVRGLTVST--- 119
GH+ + C++ P+ K SG G I +WD ++ SGH+ + L
Sbjct: 159 GHKQWVLCVSWAPDG-KRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHR 217
Query: 120 --DGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPL----AVYVWKNSFWAVDHQW 173
+ R L S D ++W+V + + A ++ +S W
Sbjct: 218 DPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMW 277
Query: 174 EGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
A G ++ + +N+ TD V+ R P P V + S S++ +L
Sbjct: 278 R----AADGILCRTFS-GHAHWVNNIALSTDYVL--RTGPFHP-VKDRSKSHLSLSTEEL 329
Query: 234 RMSSPARKVIMRANEDCNCYSY-DSRKL-----DEAKCVHM--GHESAVMDIDYSPTGRE 285
+ S+ R + +E + S D L ++ KCV GH++ V D+ YSP +
Sbjct: 330 QESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKL 389
Query: 286 FVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKA 345
+ S+D+++R+++ + G+ + +Q V+ V +S D+ ++SGS D+ L++W +
Sbjct: 390 IASASFDKSVRLWRASDGQYMATFRG-HVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQT 448
Query: 346 SE 347
+
Sbjct: 449 KK 450
Score = 90 (36.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLD-EAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTI 295
SP K+I A+ D + + R D + GH AV + +S R V+GS D T+
Sbjct: 384 SPDVKLIASASFDKSVRLW--RASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTL 441
Query: 296 RIFQYNGGR-SREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
+++ + ++E+ VF V ++ D S V SG D ++LW
Sbjct: 442 KVWSVQTKKLAQEL--PGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 84 (34.6 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 35/171 (20%), Positives = 74/171 (43%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
++ GH + + + +P+ SGS D +RLWD+ +GH+ V ++ + D
Sbjct: 114 SMPGHAEAVVSLNFSPDGAH-LASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPD 172
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
G+ L S ++ +W+ P T + + W+ + D + A+
Sbjct: 173 GKRLASGCKAGSIIIWD-P-ETGQQKGRPLSGHKKHINCLAWEP--YHRDPECRKLASAS 228
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLY 231
IW+ Q + + T+ V +VR+ A ++ T++ DR++ ++
Sbjct: 229 GDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGA--GLIYTSSKDRTVKMW 277
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 63/294 (21%), Positives = 127/294 (43%)
Query: 65 HRDGISCMAKNPNYLKG---FFSGSMDGDIRLWDIANRRTVCQYS--GHQGAVRGLTVST 119
H D I + N G SGS+D +++W ++ R Q++ GHQ V + VS
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSP 74
Query: 120 DGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFA 179
G I+ S D ++LW++ +A H + ++F
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFG 134
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDT----------VISVRFNPAEPNVLATTASDRSIT 229
+ + R + I S + D +I++ F+ A +L T ++
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG-HAMP 192
Query: 230 LYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTG 289
+ L S+ ++ +++ A++D YD + A + GH S V+++ +SP FV+
Sbjct: 193 IRSLTFSTDSQ-LLVTASDDGYIKIYDVQHASLAATLS-GHGSWVLNVAFSPDDAHFVSS 250
Query: 290 SYDRTIRIFQYNGGRSREIYHT--KRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
S D++++++ + +R HT +V+ VK++ + S ++S DD + ++
Sbjct: 251 SSDKSVKVWDVS---ARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/172 (25%), Positives = 82/172 (47%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LD I +A +P+ K SG++DG I ++DIA + + GH +R LT STD
Sbjct: 143 SLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTD 201
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
++LV+ D +K+++V A+L +V +F D + + ++
Sbjct: 202 SQLLVTASDDGYIKIYDVQHASLAATLSGHGS-------WVLNVAFSPDDAHF---VSSS 251
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD 232
+ V +W+ + +++F D V V++N + + + D+ I +YD
Sbjct: 252 SDKSVKVWDVSARTCVHTFLDHQDQVWGVKYN-RNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 118 (46.6 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
I + GH +S +A PN S S D I++W++ V ++GH+ VR + +
Sbjct: 14 IRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 72
Query: 119 TDGRILVSCGTDCTVKLWNV 138
DG ++ SC D TV++W V
Sbjct: 73 QDGTLIASCSNDQTVRVWVV 92
Score = 112 (44.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 36/177 (20%), Positives = 86/177 (48%)
Query: 175 GDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD 232
GD +A + +W + +F + V VR N + ++A+ ++D+++ ++
Sbjct: 33 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWV 91
Query: 233 LRMSSPARKVIMRANE---DCNCYSYDSR--KLDEAKCVHMGHESAVMDIDYSPTGREFV 287
+ ++ K +R +E +C ++ +S + EA +GH++ V + + G+ +
Sbjct: 92 V--ATKECKAELREHEHVVECISWAPESSYSSISEATGSEVGHDNWVRGVLFHSGGKFIL 149
Query: 288 TGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
+ + D+T+R++ Y R + + V + F A YV++GS D +++W+ +
Sbjct: 150 SCADDKTLRVWDYKNKRCMKTLNAHE-HFVTSLDFHKTAPYVVTGSVDQTVKVWECR 205
Score = 78 (32.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 91 IRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
I+LWD + GH V + + +G +VS D T+K+W V
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 50
Score = 53 (23.7 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 320 VKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE 356
V F +++S +DD LR+W K + L+ E
Sbjct: 139 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 175
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 110 (43.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 39/185 (21%), Positives = 84/185 (45%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
++ + V +W+ + + +N+ + V+ +RF ++ T + DRSI ++D+ ++
Sbjct: 282 SSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCNG---LMVTCSKDRSIAVWDMASATDI 338
Query: 240 --RKVIMRANEDCNCYSYDSRKLDEAK------------CVHM----GHESAVMDIDYSP 281
R+V++ N +D + + A C + GH+ + + Y
Sbjct: 339 SLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 398
Query: 282 TGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R V+GS D TIR++ G + + V C++F D ++SG+ D +++W
Sbjct: 399 --RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIKVW 453
Query: 342 KAKAS 346
+A+
Sbjct: 454 DLQAA 458
Score = 102 (41.0 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 37/200 (18%), Positives = 88/200 (44%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GH + C+ + + +GS D +R+WD+++ + H AV L +G
Sbjct: 261 LTGHTGSVLCLQYDERVI---VTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC-NG 316
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
++V+C D ++ +W++ AT AV V VD + + A+
Sbjct: 317 -LMVTCSKDRSIAVWDMASAT--DISLRRVLVGHRAAVNV-------VDFDDKYIVSASG 366
Query: 182 GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARK 241
+ +W+ + + + + + +++ ++ + +SD +I L+D+ + R
Sbjct: 367 DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTIRLWDIECGACLR- 422
Query: 242 VIMRANEDC-NCYSYDSRKL 260
++ +E+ C +D++++
Sbjct: 423 -VLEGHEELVRCIRFDNKRI 441
Score = 96 (38.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G+ C+ + + + SG D I++WD + + +GH G+V L + D R++V+
Sbjct: 227 GVYCLQYDDDKI---ISGLRDNSIKIWDKQSLECLKVLTGHTGSV--LCLQYDERVIVTG 281
Query: 128 GTDCTVKLWNV 138
+D TV++W+V
Sbjct: 282 SSDSTVRVWDV 292
Score = 58 (25.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGG------RSREIYHT--KRMQRVFCV 320
GHE V I + + V+G+YD I+++ S T + RVF +
Sbjct: 426 GHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL 483
Query: 321 KFSCDASYVISGSDDTNLRLW 341
+F D +IS S D + +W
Sbjct: 484 QF--DEFQIISSSHDDTILIW 502
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 132 (51.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
+ L+GH G++C+ + L SGSMD IR+W+ + GH +V LT
Sbjct: 306 VALLEGHSSGVTCLQFDQCKL---ISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF- 361
Query: 119 TDGRILVSCGTDCTVKLWN 137
D +LVS DCTVKLW+
Sbjct: 362 -DSTLLVSGSADCTVKLWH 379
Score = 118 (46.6 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 29/76 (38%), Positives = 38/76 (50%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GH DG+ C+ N L SGS D IRLW++A + V GH V L D
Sbjct: 269 LSGHSDGVMCLQLVRNILA---SGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--DQ 323
Query: 122 RILVSCGTDCTVKLWN 137
L+S D T+++WN
Sbjct: 324 CKLISGSMDKTIRIWN 339
Score = 74 (31.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 36/178 (20%), Positives = 78/178 (43%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSS-- 237
+A V +W+ + + I + + T V SVR + ++ + + D +I ++ L ++
Sbjct: 370 SADCTVKLWHFSGGKRI-TLRGHTGPVNSVRII-RDRGLVLSGSDDSTIKIWSLETNTCL 427
Query: 238 --------PARKVIMRANEDCNCYSYDSR----KLDEAKCVH--MGHESAVMDIDYSPTG 283
P + + + + +C S D +++ KCVH GH V +I +
Sbjct: 428 HTFSAHIGPVQSLALADSRLFSC-SLDGTIKQWDIEKKKCVHTLFGHIEGVWEI--AADH 484
Query: 284 REFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
++G++D +++++ + E HT + + V+SGS+D + LW
Sbjct: 485 LRLISGAHDGVVKVWE-----ACECVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYLW 537
Score = 60 (26.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 42/177 (23%), Positives = 80/177 (45%)
Query: 185 VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD--------LR-M 235
+ IWN+ S+ I+ TD+V+ + F + +L + ++D ++ L+ LR
Sbjct: 335 IRIWNYRTSECISILHGHTDSVLCLTF---DSTLLVSGSADCTVKLWHFSGGKRITLRGH 391
Query: 236 SSPARKV-IMRANEDCNCYSYDSR----KLDEAKCVHM--GHESAVMDIDYSPTGREFVT 288
+ P V I+R S DS L+ C+H H V + + + R F +
Sbjct: 392 TGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADS-RLF-S 449
Query: 289 GSYDRTIRIFQYNGGRSREIYHTK--RMQRVFCVKFSCDASYVISGSDDTNLRLWKA 343
S D TI+ + ++ HT ++ V+ + + D +ISG+ D +++W+A
Sbjct: 450 CSLDGTIKQWDIE---KKKCVHTLFGHIEGVW--EIAADHLRLISGAHDGVVKVWEA 501
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 70/307 (22%), Positives = 128/307 (41%)
Query: 63 DGHRDGISC--MAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
D H + ++C N +YL + S D ++LWD+ + GH +V S D
Sbjct: 704 DEHSEQVNCCHFTNNSHYLL-LATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPD 762
Query: 121 GRILVSCGTDCTVKLWNVPVAT------LXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWE 174
++L SC D T+KLW+V A + E + V V K W+ D
Sbjct: 763 DKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIV-KCCSWSADGT-- 819
Query: 175 GDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLR 234
+ A ++ +WN + + + V V F+P + L T++ D++I L++ +
Sbjct: 820 -RIMVAAKNKIFLWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFL-TSSDDQTIRLWETK 877
Query: 235 MSSPARKVIMRANEDC----N---CYSYDSRK---LDEAKCVHMGH--ESAVMDIDYSPT 282
++++ D N + D+ K L K + + E+ V SP
Sbjct: 878 KVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTGQIDYLIEAQVSCCCLSPH 937
Query: 283 GREFVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRL 340
+ G D + I + R I H K ++ + +F+ D +IS SDD+++++
Sbjct: 938 LQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHI---QFTDDGKTLISSSDDSSIQV 994
Query: 341 WKAKASE 347
W ++ E
Sbjct: 995 WNWQSEE 1001
Score = 114 (45.2 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 45/209 (21%), Positives = 90/209 (43%)
Query: 39 VEYVRALTAAKLEKIFARPFIGALDGHRDGI--SCMAKNPNYLKGFFSGSMDGDIRLWDI 96
+E++ L ++ RP H D + +C +++ + S +D ++++
Sbjct: 603 LEWINKKNIKNLSRLVVRP-------HTDAVYHACFSEDGQRIA---SCGVDKTLQVFKA 652
Query: 97 ANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEP 156
+ + H+ V STD R + +C D VK+WN L
Sbjct: 653 ETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVN- 711
Query: 157 LAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPA 214
+ NS + L ATA + + +W+ N+ + N+ T++V RF+P
Sbjct: 712 -CCHFTNNSHYL--------LLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSP- 761
Query: 215 EPNVLATTASDRSITLYDLRMSSPARKVI 243
+ +LA+ ++D ++ L+D++ S+ RK I
Sbjct: 762 DDKLLASCSADGTLKLWDVK-SANERKSI 789
Score = 96 (38.9 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG-GRSREIYHTKRMQRVFCVKFSCDASY 328
H+ V+ D SP +F + S D+T +I+ + E+ K R C FS D++
Sbjct: 1050 HQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVR--CSVFSVDSTL 1107
Query: 329 VISGSDDTNLRLWKAKASEQLGVLHP 354
+ +G D+ +R+W E L + P
Sbjct: 1108 LATGDDNGEIRIWNVSNGELLHLCAP 1133
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 44/153 (28%), Positives = 76/153 (49%)
Query: 84 SGSMDGDIRLWDIANRRT-VCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVA 141
+G +D IR+WDI N+ + + HQ + +VS DG L+S D + K+W++ P A
Sbjct: 206 TGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYA 265
Query: 142 TLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQW 201
+ K+S W++D + G ++ QV IW+ N Q
Sbjct: 266 PPNRNIKTFNGAQNNFEKNLIKSS-WSIDGRRIG--CGSSDRQVYIWDTNTKQLQYCLPG 322
Query: 202 GTDTVISVRFNPAEPNVLATTASDRSITLYDLR 234
+ TV V F+P EP ++A+ +SD++I L +++
Sbjct: 323 HSGTVNEVTFHPNEP-IIASCSSDKTIYLGEIK 354
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 62 LDGHRDGI-SCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVC-QYS---GHQGAVRGLT 116
L GH+ I SC K +Y SG D +I LW++ C YS GH+G + L
Sbjct: 58 LIGHKGEIYSC--KFNSYGTALASGGSDKEIFLWNVYGE---CINYSVLKGHKGTILELH 112
Query: 117 VSTDGRILVSCGTDCTVKLWN 137
STD + + TD ++ +W+
Sbjct: 113 WSTDSNEIYTACTDKSIGVWD 133
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/107 (19%), Positives = 43/107 (40%)
Query: 238 PARK---VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
PAR+ ++ ++D + +D+R H+ V + +S + +TG D
Sbjct: 155 PARRGPPLVASGSDDRSARIFDTRSKGSTHLFQ--HKYPVTSVCFSDASDQLITGGIDNV 212
Query: 295 IRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
IR++ + S D +Y++S S D + ++W
Sbjct: 213 IRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIW 259
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 122 (48.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GH + +A +P+ + F +GS D I++WD+A +GH G VRGL VS
Sbjct: 166 LQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRH 224
Query: 122 RILVSCGTDCTVKLWNV 138
+ S G D VK W++
Sbjct: 225 TYMFSAGDDKQVKCWDL 241
Score = 81 (33.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRI 297
P V++ D C +D R + + + H+S V + PT + +TGS+D TI+
Sbjct: 264 PTLDVVLTGGRDSVCRVWDIRT--KMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKF 321
Query: 298 FQYNGGRS 305
+ G+S
Sbjct: 322 WDLRYGKS 329
Score = 43 (20.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 271 ESAVMDIDYSPTGREFVTGSYDRTIRIFQ 299
E+ + Y TG VT D+TI++++
Sbjct: 428 EAGIYAACYDQTGSRLVTCEGDKTIKMWK 456
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 102 (41.0 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
I L GH GIS + +P S S D IRLW+I +R + H + L +
Sbjct: 61 ITTLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFT 120
Query: 119 TDGRILVSCGTDCTVKLWNV 138
G IL+S +D T+ +W++
Sbjct: 121 QKGNILISGSSDETITIWDI 140
Score = 86 (35.3 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 28/147 (19%), Positives = 67/147 (45%)
Query: 185 VDIWN--HNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKV 242
+ IW+ N + + + +D V S+ P + +++ + + D + L+DL+ +S K
Sbjct: 135 ITIWDITSNGGKILTTLAAHSDPVSSIALTP-DDSIIVSASYDGLMRLFDLQ-TSQCLKT 192
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
+ N + + ++ ++ + ++ SP G+ + S D IR++ Y
Sbjct: 193 L--TNSTFGGHGTATASTNDV--INF----PIAKVELSPNGQFILNSSLDGKIRLWNYME 244
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYV 329
+ + Y +++ C KF+CD ++
Sbjct: 245 NKVYKTYQGINGEKI-CEKFNCDIKFI 270
Score = 51 (23.0 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 329 VISGSDDTNLRLWKAKASEQLGVLHPREQRKHA 361
++SGSD T L +W ++ + + + P+ K A
Sbjct: 296 IVSGSDSTGLLIWDIQSKQIVFQVDPQTCGKDA 328
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 145 (56.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 60/315 (19%), Positives = 132/315 (41%)
Query: 46 TAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTV-CQ 104
T +L ++ + GH++ + +A +P+ K SGS G+I W+
Sbjct: 131 TTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDG-KHLVSGSKSGEICCWNPKKGELEGSP 189
Query: 105 YSGHQGAVRGLT-----VSTDGRILVSCGTDCTVKLWNVP----VATLXXXXXXXXXXXE 155
+GH+ + G++ +S+ R V+ D ++W++ + L
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKW 249
Query: 156 PLAVYVWKNSFWAVDHQWEGDLFATAGAQV-DIWNHNRSQPINSFQWGTDTVISV-RFNP 213
++ S WE T G + ++ H INS T+ V+ F+
Sbjct: 250 GGDGIIYTGSQDCTIKMWE----TTQGKLIRELKGHGHW--INSLALSTEYVLRTGAFDH 303
Query: 214 AEPNVLATTASDRSITLYD-LRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHES 272
+++ Y+ + SP R ++ ++D + ++ + K GH+
Sbjct: 304 TGRQYPPNEEKQKALERYNKTKGDSPER--LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQ 361
Query: 273 AVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISG 332
V + +SP G+ + S+D+++R++ G+ ++ + V+ V +S D+ ++SG
Sbjct: 362 LVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRG-HVGPVYQVSWSADSRLLLSG 420
Query: 333 SDDTNLRLWKAKASE 347
S D+ L++W+ + +
Sbjct: 421 SKDSTLKIWEIRTKK 435
Score = 103 (41.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH + + C++ +P+ K SGS D +RLWD+ + GH+ V + S DG+
Sbjct: 107 GHAEAVLCVSFSPDG-KQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKH 165
Query: 124 LVSCGTDCTVKLWN 137
LVS + WN
Sbjct: 166 LVSGSKSGEICCWN 179
Score = 101 (40.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCD 325
V GH V + +S R ++GS D T++I++ + ++ VF V +S D
Sbjct: 397 VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDL-PGHADEVFAVDWSPD 455
Query: 326 ASYVISGSDDTNLRLWK 342
V+SG D L+LWK
Sbjct: 456 GEKVVSGGKDRVLKLWK 472
Score = 73 (30.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/70 (24%), Positives = 38/70 (54%)
Query: 230 LYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTG 289
+Y + S+ +R +++ ++D ++ R + K GH V +D+SP G + V+G
Sbjct: 405 VYQVSWSADSR-LLLSGSKDSTLKIWEIRT-KKLKQDLPGHADEVFAVDWSPDGEKVVSG 462
Query: 290 SYDRTIRIFQ 299
DR +++++
Sbjct: 463 GKDRVLKLWK 472
Score = 67 (28.6 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 28/111 (25%), Positives = 50/111 (45%)
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVH--MGHESAVMDIDYSPTGREFV--TGSYDRTIRI 297
+I ++DC +++ + K + GH + + S E+V TG++D T R
Sbjct: 254 IIYTGSQDCTIKMWETT---QGKLIRELKGHGHWINSLALST---EYVLRTGAFDHTGR- 306
Query: 298 FQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQ 348
QY ++ K ++R K ++SGSDD + LW+ S+Q
Sbjct: 307 -QYPPNEEKQ----KALERYNKTKGD-SPERLVSGSDDFTMFLWEPSVSKQ 351
Score = 67 (28.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 106 SGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
+GH AV ++ S DG+ L S D TV+LW++ T
Sbjct: 106 AGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTET 142
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 114 (45.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 52/233 (22%), Positives = 102/233 (43%)
Query: 21 LQRVYHNYDPNLRPQEKAVEYVRALTAAKLEK---IFARPFIGALDGHRDGISCMAKNPN 77
LQR ++ + L+ ++ + + A T K + I P L GHR I+ + +P
Sbjct: 59 LQRKVNDLESKLQESQREINH-GAPTRDKRQAADWIPRPPETQKLTGHRLPITRVIFHPL 117
Query: 78 YLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
+ S S D I++WD + GH AV + + G+ LVSC +D ++KLW+
Sbjct: 118 WTI-MASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWD 176
Query: 138 VPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI--WNHNRSQP 195
+ L + +++ +V GD +A I W+ +
Sbjct: 177 F---------GQTYDCLKSLKGH--EHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYC 225
Query: 196 INSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANE 248
+ +F+ D V +R + + + A+ + D+++T++ S K+++R +E
Sbjct: 226 VYTFRGHNDWVRMIRISN-DGTLFASASLDQTVTVWSFATKSA--KLVLRDHE 275
Score = 87 (35.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 18/77 (23%), Positives = 41/77 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+ HE+ V + + P G+ ++ + D+T+R+++ + R + V V F +
Sbjct: 329 LAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHE-HFVSTVAFHQTSP 387
Query: 328 YVISGSDDTNLRLWKAK 344
+VI+GS D + ++W+ +
Sbjct: 388 FVITGSVDMSCKVWECR 404
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 66/310 (21%), Positives = 138/310 (44%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQ-YSGHQGAVRGLT---- 116
L GH + + C++ +P+ + +GSMD IRLWD + + + GH + L+
Sbjct: 182 LKGHYNWVLCVSWSPDG-EVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPI 240
Query: 117 --VSTDGRI-LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQ- 172
V + L S D T+K+W+ V+ + + + ++ H
Sbjct: 241 HLVKPGSKPRLASSSKDGTIKIWDT-VSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDR 299
Query: 173 ----WEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISV-RFNPA--EPNVLATTASD 225
W+ + G ++I + + +N TD + + F+ +P+ A
Sbjct: 300 TVRVWD---INSQGRCINILK-SHAHWVNHLSLSTDYALRIGAFDHTGKKPST-PEEAQK 354
Query: 226 RSITLYD--LRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTG 283
+++ Y+ + + + ++++ A++D + ++ K + GH+ V + +SP G
Sbjct: 355 KALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDG 414
Query: 284 REFVTGSYDRTIRIFQYNGGRSREIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLW 341
R V+ S+D +I+++ GR + T R + V+ V +S D ++S S DT L++W
Sbjct: 415 RYIVSASFDNSIKLWD---GRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW 471
Query: 342 KAKASEQLGV 351
+ + +L V
Sbjct: 472 DVR-TRKLSV 480
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
I + GH+ ++ +A +P+ + S S D I+LWD + + + + GH +V + S
Sbjct: 395 IARMTGHQKLVNHVAFSPDG-RYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWS 453
Query: 119 TDGRILVSCGTDCTVKLWNV 138
+D R+LVSC D T+K+W+V
Sbjct: 454 SDCRLLVSCSKDTTLKVWDV 473
Score = 103 (41.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
A+ GH I C A P+ +G+ D R+WD + + GH V ++ S D
Sbjct: 138 AIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPD 197
Query: 121 GRILVSCGTDCTVKLWN 137
G ++ + D T++LW+
Sbjct: 198 GEVIATGSMDNTIRLWD 214
Score = 88 (36.0 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
SP + I+ A+ D + +D R + GH ++V + +S R V+ S D T++
Sbjct: 411 SPDGRYIVSASFDNSIKLWDGRD-GKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLK 469
Query: 297 IFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
++ R + V+ V +S D V SG D +RLW
Sbjct: 470 VWDVRT-RKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 67 (28.6 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 229 TLYDLRMSSPARKVIMRANEDCNCYSYD--SRKLDEAKCVHM-GHESAVMDIDYSPTGRE 285
++Y + SS R +++ ++D +D +RKL V + GH+ V +D+S G+
Sbjct: 446 SVYQVAWSSDCR-LLVSCSKDTTLKVWDVRTRKLS----VDLPGHKDEVYTVDWSVDGKR 500
Query: 286 FVTGSYDRTIRIFQY 300
+G D+ +R++ +
Sbjct: 501 VCSGGKDKMVRLWTH 515
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRI 297
P + + ++D Y ++ K + +GH+ AV + YSP G + DR IR+
Sbjct: 57 PKMRQVASCSKDSIVYVWNF-KPQQRPFKFVGHKGAVYCVKYSPDGETIASCGQDRQIRL 115
Query: 298 FQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
+Q N +S+ + + FS D Y++S SDD L+LW+
Sbjct: 116 WQ-NTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWR 159
Score = 118 (46.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH D I+C +P ++ S S D + +W+ ++ ++ GH+GAV + S DG
Sbjct: 45 GHEDIITCADFDPK-MRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGET 103
Query: 124 LVSCGTDCTVKLW 136
+ SCG D ++LW
Sbjct: 104 IASCGQDRQIRLW 116
Score = 111 (44.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 56 RPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGL 115
RPF GH+ + C+ +P+ + S D IRLW + H GA+R +
Sbjct: 81 RPF--KFVGHKGAVYCVKYSPDG-ETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSM 137
Query: 116 TVSTDGRILVSCGTDCTVKLWNV 138
+ S DG L+S D T+KLW +
Sbjct: 138 SFSADGGYLLSSSDDKTLKLWRL 160
Score = 105 (42.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
S S D ++LW + +++ +C ++GH+ VR +S D R++ S D TV LW++
Sbjct: 148 SSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDL 202
Score = 88 (36.0 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 32/173 (18%), Positives = 75/173 (43%)
Query: 187 IWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRA 246
+W + + SF + V S +P + ++A+ + D+++ L+DL +K++ +
Sbjct: 157 LWRLQDKKFMCSFAGHKNWVRSGVISP-DMRLVASGSDDKTVMLWDLNF----QKIVSK- 210
Query: 247 NEDCNCYSY--DSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGR 304
YS D+ K+ + + H V + + P G ++ S+D I+I +
Sbjct: 211 ------YSTLDDNVKISQINS-YSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNK 263
Query: 305 SREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
+ Y+ Q V + ++ S D+ +++W + Q+ L+ ++
Sbjct: 264 LIQHYNAHDAQ-VNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDK 315
Score = 71 (30.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 19/81 (23%), Positives = 33/81 (40%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQR-VFCVKFSCDASY 328
H++ V I PTG + D I+I+ GR +IY + + V+F+ Y
Sbjct: 271 HDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGR--QIYTLYSNDKDITTVQFNQSGDY 328
Query: 329 VISGSDDTNLRLWKAKASEQL 349
+G +WK + +
Sbjct: 329 FATGGSQNLCMVWKTNFDQNI 349
Score = 69 (29.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 262 EAKC-VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVF 318
++KC + H A+ + +S G ++ S D+T+++++ + + H K R
Sbjct: 121 QSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGH-KNWVRSG 179
Query: 319 CVKFSCDASYVISGSDDTNLRLW 341
+ S D V SGSDD + LW
Sbjct: 180 VI--SPDMRLVASGSDDKTVMLW 200
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 153 (58.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 63/282 (22%), Positives = 127/282 (45%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYS--GHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVA 141
+GS+D +++W ++ + Q++ GHQ V + +S +G I S D ++LW+
Sbjct: 37 TGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWD---- 92
Query: 142 TLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAG--AQVDIWNHNRSQPINSF 199
L P V W +F + D ++ AT +V+I+ + +S
Sbjct: 93 -LETGKQIKSMDAGP--VDAWTVAF-SPDSKY----IATGSHLGKVNIFGVESGKKEHSL 144
Query: 200 QWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMS------------------SPARK 241
++S+ ++P + LA+ A D I ++D+ SP +
Sbjct: 145 DTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYN 301
+++ A++D YD + + A + GH S V+ + +SP FV+ S D++I+++ +
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLS-GHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTS 262
Query: 302 GGRSREIYHT--KRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
SR +T +V+ VK++ S ++S DD + ++
Sbjct: 263 ---SRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Score = 148 (57.2 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LD I +A +P+ K SG++DG I ++DIA + + GH +R LT S D
Sbjct: 143 SLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD 201
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
++LV+ D +K+++V A L +V +F D + + ++
Sbjct: 202 SQLLVTASDDGYIKIYDVQHANLAGTLSGHGS-------WVLSVAFSPDDTHF---VSSS 251
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRM 235
+ + +W+ + +N+F D V SV++NP +++ DR+I +YD M
Sbjct: 252 SDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSA-GDDRAIHIYDCPM 305
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 133 (51.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
SGS DG++RLWD+A + ++ GH V + STD R +VS D T+KLWN
Sbjct: 80 SGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Score = 130 (50.8 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 59 IGALDGHRDGISCMAKNPNYL-KGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
I DGH++ +SC+ +PN L S S D +++W++ N + +GH G + + V
Sbjct: 142 ISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAV 201
Query: 118 STDGRILVSCGTDCTVKLWNV 138
S DG + S G D + LW++
Sbjct: 202 SPDGSLCASGGKDGVILLWDL 222
Score = 62 (26.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 269 GHESAVMDIDYSPTGR--EFVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSC 324
GH+ V + +SP V+ S+D+T++++ + R H+ + V S
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTV---AVSP 203
Query: 325 DASYVISGSDDTNLRLWKAKASEQL 349
D S SG D + LW ++L
Sbjct: 204 DGSLCASGGKDGVILLWDLAEGKKL 228
Score = 43 (20.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 317 VFC--VKFSCDASYVISGSDDTNLRLW 341
++C + +S D + + SG D +R+W
Sbjct: 295 IYCTSLNWSADGNTLFSGYTDGVIRVW 321
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 143 (55.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQ-YSGHQGAVRGLTVSTDGR 122
GH GISC+ P SGSMD I++W++ + R++ + + GH +R L+ S DGR
Sbjct: 264 GHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGR 323
Query: 123 ILVSCGTDCTVKLWN 137
+S D T+KLW+
Sbjct: 324 SFLSTSFDKTIKLWD 338
Score = 59 (25.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 17/77 (22%), Positives = 30/77 (38%)
Query: 224 SDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTG 283
SDR ++ + D +D R D + + H + I + G
Sbjct: 350 SDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIRSPDIVQA-YDHHLGGINSITFLENG 408
Query: 284 REFVTGSYDRTIRIFQY 300
+ FVT S D ++R ++Y
Sbjct: 409 KRFVTTSDDSSMRFWEY 425
Score = 56 (24.8 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 285 EFVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
EF+ G+ D+ RI Q++ RS +I + + + + F + ++ SDD+++R W+
Sbjct: 368 EFLAGTADK--RILQFDI-RSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWE 424
Score = 51 (23.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 11/51 (21%), Positives = 24/51 (47%)
Query: 185 VDIWNHNRSQPINSFQWGTDT-VISVRFNPAEPNVLATTASDRSITLYDLR 234
+ +W+ + +N F T + + +P +PN +D+ I +D+R
Sbjct: 334 IKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIR 384
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 158 (60.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 76/321 (23%), Positives = 130/321 (40%)
Query: 36 EKAVEYVRALTAAKLEKIF-ARPFIGA--LDGHRDG-ISCMAKNPNYLKGFFSGSMDGDI 91
E+A + R L A K+EK + A P +G+ L GH D I+CM + + L +GS D +
Sbjct: 222 ERAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVL---VTGSDDNTL 278
Query: 92 RLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXX 151
++W I + GH G V +S GR +VS TD TVK+W+ +L
Sbjct: 279 KVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHT 338
Query: 152 XXXEPLAV---YVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVIS 208
+A+ + S W+ + +G + H + Q+ TV+S
Sbjct: 339 STVRCMAMAGSILVTGSRDTTLRVWDVE----SGRHLATL-HGHHAAVRCVQFDGTTVVS 393
Query: 209 ------VRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDE 262
V+ A T + + +Y L S R ++ + D + +D + +
Sbjct: 394 GGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESE-RSIVCSGSLDTSIRVWDFTRPEG 452
Query: 263 AKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCV 320
+CV + GH S + G V+ + D +R++ + G + R
Sbjct: 453 QECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQ 510
Query: 321 KFSCDASYVISGSDDTNLRLW 341
F + V + SDD ++LW
Sbjct: 511 WFG--RNMVATSSDDGTVKLW 529
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 158 (60.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 76/321 (23%), Positives = 130/321 (40%)
Query: 36 EKAVEYVRALTAAKLEKIF-ARPFIGA--LDGHRDG-ISCMAKNPNYLKGFFSGSMDGDI 91
E+A + R L A K+EK + A P +G+ L GH D I+CM + + L +GS D +
Sbjct: 222 ERAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVL---VTGSDDNTL 278
Query: 92 RLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXX 151
++W I + GH G V +S GR +VS TD TVK+W+ +L
Sbjct: 279 KVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHT 338
Query: 152 XXXEPLAV---YVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVIS 208
+A+ + S W+ + +G + H + Q+ TV+S
Sbjct: 339 STVRCMAMAGSILVTGSRDTTLRVWDVE----SGRHLATL-HGHHAAVRCVQFDGTTVVS 393
Query: 209 ------VRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDE 262
V+ A T + + +Y L S R ++ + D + +D + +
Sbjct: 394 GGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESE-RSIVCSGSLDTSIRVWDFTRPEG 452
Query: 263 AKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCV 320
+CV + GH S + G V+ + D +R++ + G + R
Sbjct: 453 QECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQ 510
Query: 321 KFSCDASYVISGSDDTNLRLW 341
F + V + SDD ++LW
Sbjct: 511 WFG--RNMVATSSDDGTVKLW 529
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 114 (45.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 63 DGHRDGISC--MAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
D H + ++C N +YL + S D ++LWD+ + GH +V S D
Sbjct: 697 DEHSEQVNCCHFTNNSHYLL-LATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPD 755
Query: 121 GRILVSCGTDCTVKLWNVPVA 141
++L SC D T+KLW+V A
Sbjct: 756 DKLLASCSADGTLKLWDVKSA 776
Score = 110 (43.8 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 41/183 (22%), Positives = 81/183 (44%)
Query: 65 HRDGI--SCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR 122
H D + +C +++ + S +D ++++ + + H+ V STD R
Sbjct: 615 HTDAVYHACFSEDGQRIA---SCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDR 671
Query: 123 ILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAG 182
+ +C D VK+WN L + NS + L ATA
Sbjct: 672 FIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVN--CCHFTNNSHYL--------LLATAS 721
Query: 183 AQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
+ + +W+ N+ + N+ T++V RF+P + +LA+ ++D ++ L+D++ S+ R
Sbjct: 722 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSP-DDKLLASCSADGTLKLWDVK-SANER 779
Query: 241 KVI 243
K I
Sbjct: 780 KSI 782
Score = 98 (39.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 23/80 (28%), Positives = 37/80 (46%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSC 324
+H GH S + D+SP V + + +N ++ + + V CV FS
Sbjct: 836 IHTGHHSTIQYCDFSPQNHLAVVALSQCCVEL--WNMDSCLKVADCRGHLSWVHCVMFSP 893
Query: 325 DASYVISGSDDTNLRLWKAK 344
D S ++ SDD +RLW+ K
Sbjct: 894 DGSSFLTSSDDQTIRLWETK 913
Score = 96 (38.9 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG-GRSREIYHTKRMQRVFCVKFSCDASY 328
H+ V+ D SP +F + S D+T +I+ + E+ K R C FS D++
Sbjct: 1085 HQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVR--CSVFSVDSTL 1142
Query: 329 VISGSDDTNLRLWKAKASEQLGVLHP 354
+ +G D+ +R+W E L + P
Sbjct: 1143 LATGDDNGEIRIWNVSNGELLHLCAP 1168
Score = 71 (30.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 38/160 (23%), Positives = 64/160 (40%)
Query: 108 HQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFW 167
H AV S DG+ + SCG D T++++ T E L +F
Sbjct: 615 HTDAVYHACFSEDGQRIASCGVDKTLQVFKAE--TGEKLLEIKAHEDEVLCC-----AF- 666
Query: 168 AVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRF-NPAEPNVLATTASDR 226
+ D ++ + +V IWN ++ + ++ V F N + +LAT +SD
Sbjct: 667 STDDRFIAT--CSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDC 724
Query: 227 SITLYDLRMSSPARKVIMRANEDCNC-YSYDSRKLDEAKC 265
+ L+DL + N +C +S D + L A C
Sbjct: 725 FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLL--ASC 762
Score = 60 (26.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 17/75 (22%), Positives = 39/75 (52%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSRE-IYHTKRMQRVFCVKFSCDA 326
+GH+ V I ++ G+ ++ S D +I+++ + +S E ++ + V K +
Sbjct: 1001 IGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNW---QSEEYVFLQAHQETVKDFKLLKN- 1056
Query: 327 SYVISGSDDTNLRLW 341
S ++S S D +++W
Sbjct: 1057 SKLLSWSFDGTVKIW 1071
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 114 (45.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 63 DGHRDGISC--MAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
D H + ++C N +YL + S D ++LWD+ + GH +V S D
Sbjct: 704 DEHSEQVNCCHFTNNSHYLL-LATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPD 762
Query: 121 GRILVSCGTDCTVKLWNVPVA 141
++L SC D T+KLW+V A
Sbjct: 763 DKLLASCSADGTLKLWDVKSA 783
Score = 110 (43.8 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 41/183 (22%), Positives = 81/183 (44%)
Query: 65 HRDGI--SCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR 122
H D + +C +++ + S +D ++++ + + H+ V STD R
Sbjct: 622 HTDAVYHACFSEDGQRIA---SCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDR 678
Query: 123 ILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAG 182
+ +C D VK+WN L + NS + L ATA
Sbjct: 679 FIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVN--CCHFTNNSHYL--------LLATAS 728
Query: 183 AQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPAR 240
+ + +W+ N+ + N+ T++V RF+P + +LA+ ++D ++ L+D++ S+ R
Sbjct: 729 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSP-DDKLLASCSADGTLKLWDVK-SANER 786
Query: 241 KVI 243
K I
Sbjct: 787 KSI 789
Score = 98 (39.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 23/80 (28%), Positives = 37/80 (46%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSC 324
+H GH S + D+SP V + + +N ++ + + V CV FS
Sbjct: 843 IHTGHHSTIQYCDFSPQNHLAVVALSQCCVEL--WNMDSCLKVADCRGHLSWVHCVMFSP 900
Query: 325 DASYVISGSDDTNLRLWKAK 344
D S ++ SDD +RLW+ K
Sbjct: 901 DGSSFLTSSDDQTIRLWETK 920
Score = 96 (38.9 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG-GRSREIYHTKRMQRVFCVKFSCDASY 328
H+ V+ D SP +F + S D+T +I+ + E+ K R C FS D++
Sbjct: 1093 HQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVR--CSVFSVDSTL 1150
Query: 329 VISGSDDTNLRLWKAKASEQLGVLHP 354
+ +G D+ +R+W E L + P
Sbjct: 1151 LATGDDNGEIRIWNVSNGELLHLCAP 1176
Score = 71 (30.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 38/160 (23%), Positives = 64/160 (40%)
Query: 108 HQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFW 167
H AV S DG+ + SCG D T++++ T E L +F
Sbjct: 622 HTDAVYHACFSEDGQRIASCGVDKTLQVFKAE--TGEKLLEIKAHEDEVLCC-----AF- 673
Query: 168 AVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRF-NPAEPNVLATTASDR 226
+ D ++ + +V IWN ++ + ++ V F N + +LAT +SD
Sbjct: 674 STDDRFIAT--CSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDC 731
Query: 227 SITLYDLRMSSPARKVIMRANEDCNC-YSYDSRKLDEAKC 265
+ L+DL + N +C +S D + L A C
Sbjct: 732 FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLL--ASC 769
Score = 55 (24.4 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 15/75 (20%), Positives = 36/75 (48%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSRE-IYHTKRMQRVFCVKFSCDA 326
+GH+ V I ++ G+ ++ S D +I+++ + +S E ++ + V K ++
Sbjct: 1008 IGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNW---QSEEYVFLQAHQETVKDFKLLKNS 1064
Query: 327 SYVISGSDDTNLRLW 341
+ D T ++W
Sbjct: 1065 KLLSWSFDGTVKKIW 1079
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 113 (44.8 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 37/109 (33%), Positives = 54/109 (49%)
Query: 41 YVRAL-TAAKLEKI---FARPFIGA-------LDGHRDGISCMAKNPNYLKGFFSGSMDG 89
Y R L TAA +E+I + RP A + GH + +A +P+ + F +GS D
Sbjct: 140 YQRNLSTAALMERIPSRWPRPEWHAPWKNYRVIQGHLGWVRSVAFDPSN-EWFCTGSADR 198
Query: 90 DIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
I++WD+A +GH VRGL VS + S G D VK W++
Sbjct: 199 TIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDL 247
Score = 89 (36.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 25/100 (25%), Positives = 47/100 (47%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRI 297
P V++ D C +D R + + GH++ V + PT + VTGS+D TI+
Sbjct: 270 PTLDVLLTGGRDSVCRVWDIRTKMQIFALS-GHDNTVCSVFTRPTDPQVVTGSHDTTIKF 328
Query: 298 FQYNGGRSRE-IYHTKRMQRVFCVKFSCDASYVISGSDDT 336
+ G++ + H K+ R + +A + + +D+T
Sbjct: 329 WDLRYGKTMSTLTHHKKSVRAMTLHPKENA-FASASADNT 367
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 152 (58.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 66/295 (22%), Positives = 129/295 (43%)
Query: 65 HRDGISCMAKNPNYLKG---FFSGSMDGDIRLWDIANRRTVCQYS--GHQGAVRGLTVST 119
H D I +A N G SGS+D +++W + + Q++ GHQ V + +S
Sbjct: 15 HDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISH 74
Query: 120 DGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAV-DHQWEGDLF 178
G I S D ++LW++ LA + + F A H + ++F
Sbjct: 75 TGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLA-FSPDSQFLATGSHVGKVNIF 133
Query: 179 ATAGAQVDIWNHNRSQPINSFQWGTDT----------VISVRFNPAEPNVLATTASDRSI 228
+ + R + I S + D +I++ F+ A +L T ++
Sbjct: 134 GVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG-HAM 191
Query: 229 TLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVT 288
+ L S P ++++ A++D YD + + A + GH S V+++ + P FV+
Sbjct: 192 PIRSLTFS-PDSQLLVTASDDGYIKIYDVQHANLAGTLS-GHGSWVLNVAFCPDDTHFVS 249
Query: 289 GSYDRTIRIFQYNGGRSREIYHT--KRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
S D+++++ ++ G +R HT +V+ VK++ S ++S DD + ++
Sbjct: 250 SSSDKSVKV--WDAG-TRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 124 (48.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 42/172 (24%), Positives = 80/172 (46%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LD I +A +P+ K SG++DG I ++DIA + + GH +R LT S D
Sbjct: 143 SLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD 201
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
++LV+ D +K+++V A L +V +F D + + ++
Sbjct: 202 SQLLVTASDDGYIKIYDVQHANLAGTLSGHGS-------WVLNVAFCPDDTHF---VSSS 251
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD 232
+ V +W+ +++F D V V++N + +++ D+ I +YD
Sbjct: 252 SDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSV-GDDQEIHIYD 302
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 125 (49.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 61 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 117
Query: 119 TDGRILVSCGTDCTVKLWN 137
+D R +VS D T+KLWN
Sbjct: 118 SDNRQIVSGSRDKTIKLWN 136
Score = 103 (41.3 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 47 AAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VC 103
AA E++ R G L GH ++ +A P + S S D I +W + T +
Sbjct: 2 AAMTEQMTLR---GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIP 58
Query: 104 QYS--GHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
Q + GH V + +S+DG+ +S D T++LW++ T
Sbjct: 59 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT 99
Score = 94 (38.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G + + V CV+FS ++S
Sbjct: 105 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 164
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 165 NPIIVSCGWDKLVKVW 180
Score = 53 (23.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
K H+GH + + SP G +G D ++ N G+ +Y + + FS
Sbjct: 188 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFS 245
Query: 324 CDASYVISGSDDTNLRLW 341
+ Y + + ++++W
Sbjct: 246 PNR-YWLCAATGPSIKIW 262
Score = 51 (23.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 150 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 206
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 207 GSLCASGGKDGQAMLWDLNEGKHLYTL 233
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 161 (61.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 62/264 (23%), Positives = 110/264 (41%)
Query: 88 DGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXX 147
+G I+LWD + ++ GH G VRG+ + VS G D V +WN L
Sbjct: 32 NGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSL 91
Query: 148 XXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVI 207
YV +F H++ L + + IWN I + V+
Sbjct: 92 CGHMD-------YVRVCTF---HHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVM 141
Query: 208 SVRFNPAEPNVLATTASDRSITLYD---LRMSSPARKVIMRANEDC----NCYSYDSRKL 260
F+P+E +++ + + D+++ ++D LRM + A V M + N S D
Sbjct: 142 CAAFHPSE-DLIVSASLDQTVRVWDISGLRMKNAA-PVSMSLEDQLAQAHNSISNDLFGS 199
Query: 261 DEA--KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRV 317
+A K V GH+ V + PT ++ DR +++++ ++ E+ + V
Sbjct: 200 TDAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNV 259
Query: 318 FCVKFSCDASYVISGSDDTNLRLW 341
C F ++S S+D +R+W
Sbjct: 260 SCCLFHPHQELILSASEDKTIRVW 283
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 151 (58.2 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 63/294 (21%), Positives = 126/294 (42%)
Query: 65 HRDGISCMAKNPNYLKG---FFSGSMDGDIRLWDIANRRTVCQYS--GHQGAVRGLTVST 119
H D I + N G SGS+D +++W ++ R Q + GHQ V + VS
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSP 74
Query: 120 DGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFA 179
G I+ S D ++LW++ +A H + ++F
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFG 134
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDT----------VISVRFNPAEPNVLATTASDRSIT 229
+ + R + I S + D +I++ F+ A +L T ++
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG-HAMP 192
Query: 230 LYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTG 289
+ L S P ++++ A++D Y+ + A + GH S V+++ +SP FV+
Sbjct: 193 IRSLTFS-PDSQLLVTASDDGYIKIYEVQHASLAATLS-GHGSWVLNVAFSPDDTHFVSS 250
Query: 290 SYDRTIRIFQYNGGRSREIYHT--KRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
S D++++++ + +R HT +V+ VK++ + S ++S +DD + ++
Sbjct: 251 SSDKSVKVWDVS---ARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVY 301
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 43/172 (25%), Positives = 81/172 (47%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LD I +A +P+ K SG++DG I ++DIA + + GH +R LT S D
Sbjct: 143 SLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD 201
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
++LV+ D +K++ V A+L +V +F D + + ++
Sbjct: 202 SQLLVTASDDGYIKIYEVQHASLAATLSGHGS-------WVLNVAFSPDDTHF---VSSS 251
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD 232
+ V +W+ + +++F D V V++N +++ A D+ I +YD
Sbjct: 252 SDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSV-ADDQEIHVYD 302
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 151 (58.2 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 66/295 (22%), Positives = 129/295 (43%)
Query: 65 HRDGISCMAKNPNYLKG---FFSGSMDGDIRLWDIANRRTVCQYS--GHQGAVRGLTVST 119
H D I +A N G SGS+D +++W + + Q++ GHQ V + +S
Sbjct: 15 HDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISH 74
Query: 120 DGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAV-DHQWEGDLF 178
G I S D ++LW++ LA + + F A H + ++F
Sbjct: 75 TGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLA-FSPDSQFLATGSHVGKVNIF 133
Query: 179 ATAGAQVDIWNHNRSQPINSFQWGTDT----------VISVRFNPAEPNVLATTASDRSI 228
+ + R + I S + D +I++ F+ A +L T ++
Sbjct: 134 GVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG-HAM 191
Query: 229 TLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVT 288
+ L S P ++++ A++D YD + + A + GH S V+++ + P FV+
Sbjct: 192 PIRSLTFS-PDSQLLVTASDDGYIKIYDVQHANLAGTLS-GHGSWVLNVAFCPDDTHFVS 249
Query: 289 GSYDRTIRIFQYNGGRSREIYHT--KRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
S D+++++ ++ G +R HT +V+ VK++ S ++S DD + ++
Sbjct: 250 SSSDKSVKV--WDAG-TRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 124 (48.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 42/172 (24%), Positives = 80/172 (46%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+LD I +A +P+ K SG++DG I ++DIA + + GH +R LT S D
Sbjct: 143 SLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD 201
Query: 121 GRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFAT 180
++LV+ D +K+++V A L +V +F D + + ++
Sbjct: 202 SQLLVTASDDGYIKIYDVQHANLAGTLSGHGS-------WVLNVAFCPDDTHF---VSSS 251
Query: 181 AGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD 232
+ V +W+ +++F D V V++N + +++ D+ I +YD
Sbjct: 252 SDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSV-GDDQEIHIYD 302
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 124 (48.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 31/79 (39%), Positives = 42/79 (53%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 58 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
Query: 119 TDGRILVSCGTDCTVKLWN 137
D R +VS D T+KLWN
Sbjct: 115 ADNRQIVSGSRDKTIKLWN 133
Score = 116 (45.9 bits), Expect = 0.00045, P = 0.00044
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 63 DGHRDGISCMAKNPNYLKGFF-SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
D H + +SC+ +PN S D +++W++AN + + GH G + +TVS DG
Sbjct: 145 DSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDG 204
Query: 122 RILVSCGTDCTVKLWNV 138
+ S G D LW++
Sbjct: 205 SLCASGGKDGQAMLWDL 221
Score = 113 (44.8 bits), Expect = 0.00096, P = 0.00096
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS--REIYHTKRMQRVFCVKFSCDA 326
GH V D+ S G+ ++GS+D T+R++ G + R + HTK V V FS D
Sbjct: 61 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD---VLSVAFSADN 117
Query: 327 SYVISGSDDTNLRLW 341
++SGS D ++LW
Sbjct: 118 RQIVSGSRDKTIKLW 132
Score = 100 (40.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VCQYS--GHQGAVRG 114
G L GH ++ +A P + S S D I +W + T + Q + GH V
Sbjct: 9 GTLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVAT 142
+ +S+DG+ +S D T++LW++ T
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGT 96
Score = 96 (38.9 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G I + V CV+FS ++S
Sbjct: 102 VGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSS 161
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 162 NPIIVSCGWDKMVKVW 177
Score = 55 (24.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
K H+GH + + SP G +G D ++ N G+ +Y + + FS
Sbjct: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDTINALCFS 242
Query: 324 CDASYVISGSDDTNLRLW 341
+ Y + + ++++W
Sbjct: 243 PNR-YWLCAATGPSIKIW 259
Score = 50 (22.7 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 147 HTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 203
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 204 GSLCASGGKDGQAMLWDLNEGKHLYTL 230
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 154 (59.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 78/318 (24%), Positives = 119/318 (37%)
Query: 93 LWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXX 152
LW+ +Y GH+ V + S G +L S D TV+LW +P
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLW-IP--DKRGKFSEFKA 58
Query: 153 XXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVR 210
P+ +VD +G ATA + +W+ R + + S T V +
Sbjct: 59 HTAPVR---------SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAK 109
Query: 211 FNPAEPNVLATTASDRSITLYDLRMS------------------SPARKVIMRANEDCNC 252
F+P + ++ + + D++I ++D +P+ I A D
Sbjct: 110 FSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTV 168
Query: 253 YSYDSR--KLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYH 310
+D R KL + VH G V I + P+G +T S D T++I GR IY
Sbjct: 169 KVWDVRVNKLLQHYQVHSG---GVNCISFHPSGNYLITASSDGTLKILDLLEGRL--IYT 223
Query: 311 TK-RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHEAVKNR 369
+ VF V FS SG DT + LW+ E LH + K +
Sbjct: 224 LQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDE----LHCKGLTKRNLKRLHFDS 279
Query: 370 YKHLPEIKRIVRHRHLPK 387
HL +I H H K
Sbjct: 280 PPHLLDIYPRTPHPHEEK 297
Score = 145 (56.1 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 56/262 (21%), Positives = 112/262 (42%)
Query: 64 GHRDGISCMAKNP--NYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
GH+D ++ + +P N L S S D +RLW R ++ H VR + S DG
Sbjct: 16 GHKDVVTSVQFSPHGNLLA---SASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG 72
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQW--EGDLFA 179
+ L + D ++K+W++ + +++++ W ++ +G L
Sbjct: 73 QFLATASEDKSIKVWSM--------------YRQRFLYSLYRHTHWVRCAKFSPDGRLIV 118
Query: 180 TAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSS 237
+ + IW+ Q +N+F V FNP+ +A+ SD+++ ++D+R++
Sbjct: 119 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSG-TCIASAGSDQTVKVWDVRVNK 177
Query: 238 PARKVIMRANEDCNCYSY------------DS--RKLD--EAKCVH--MGHESAVMDIDY 279
+ + + NC S+ D + LD E + ++ GH V + +
Sbjct: 178 LLQHYQVHSG-GVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 236
Query: 280 SPTGREFVTGSYDRTIRIFQYN 301
S G F +G D + +++ N
Sbjct: 237 SKGGELFASGGADTQVLLWRTN 258
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 133 (51.9 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 41/178 (23%), Positives = 73/178 (41%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
I GHR G+ + + + L SGS+D +++W+ ++ T GH V + V
Sbjct: 422 ISTYTGHRGGVIGLHFDASILA---SGSVDKTVKIWNFEDKSTF-SLRGHTDWVNAVRVD 477
Query: 119 TDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLF 178
T R + S DCTV+LW++ T + + + F D + E D
Sbjct: 478 TSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVPLPREFEFEEHDAECENDDL 537
Query: 179 ATAGAQVDIWNHNRSQPIN-SFQWGTDTVISVRFN---PAEPNVLATTASDRSITLYD 232
+T D + S + + + + F+ A P + T+A D +I L++
Sbjct: 538 STTSGDADPPSIQASMGLEPNAAYSQSSAFGTSFDNGRAAPPRYMVTSALDSTIRLWE 595
Score = 132 (51.5 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 31/76 (40%), Positives = 40/76 (52%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GH GI C+ + L SGSMD I++W+ + Y+GH+G V GL D
Sbjct: 385 LRGHESGIRCLQFDDTKL---ISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF--DA 439
Query: 122 RILVSCGTDCTVKLWN 137
IL S D TVK+WN
Sbjct: 440 SILASGSVDKTVKIWN 455
Score = 119 (46.9 bits), Expect = 0.00068, P = 0.00068
Identities = 45/184 (24%), Positives = 79/184 (42%)
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRAN 247
W + R I +F+ T+ V+ ++F E N+LAT + D +I ++D R +R +
Sbjct: 335 WKYGRCS-IKTFKGHTNGVMCLQF---EDNILATGSYDTTIKIWDTETGEELRT--LRGH 388
Query: 248 ED-CNCYSYDSRKL-----DEA---------KCV--HMGHESAVMDIDYSPTGREFVTGS 290
E C +D KL D +C+ + GH V+ + + + +GS
Sbjct: 389 ESGIRCLQFDDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDAS--ILASGS 446
Query: 291 YDRTIRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
D+T++I+ + + + HT V V+ + V S SDD +RLW +
Sbjct: 447 VDKTVKIWNFEDKSTFSLRGHT---DWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCI 503
Query: 350 GVLH 353
H
Sbjct: 504 RTFH 507
Score = 109 (43.4 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 54 FARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVR 113
+ R I GH +G+ C+ N L +GS D I++WD + GH+ +R
Sbjct: 337 YGRCSIKTFKGHTNGVMCLQFEDNILA---TGSYDTTIKIWDTETGEELRTLRGHESGIR 393
Query: 114 GLTVSTDGRILVSCGTDCTVKLWN 137
L D L+S D T+K+WN
Sbjct: 394 CLQF--DDTKLISGSMDRTIKVWN 415
Score = 69 (29.3 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 15/64 (23%), Positives = 33/64 (51%)
Query: 284 REFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKA 343
R VT + D TIR+++ GR + ++ V+ + D ++SG++D +++W
Sbjct: 580 RYMVTSALDSTIRLWETTTGRCLRTFFG-HLEGVWAL--GADTLRIVSGAEDRMIKIWDP 636
Query: 344 KASE 347
+ +
Sbjct: 637 RTGK 640
Score = 66 (28.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/129 (24%), Positives = 59/129 (45%)
Query: 215 EPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVH--MGHES 272
EPN A + S T +D ++P R ++ A D +++ +C+ GH
Sbjct: 556 EPNA-AYSQSSAFGTSFDNGRAAPPRYMVTSAL-DSTIRLWETTT---GRCLRTFFGHLE 610
Query: 273 AVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISG 332
V + + T R V+G+ DR I+I+ G+ + T V C+ D+ + +G
Sbjct: 611 GVWALG-ADTLR-IVSGAEDRMIKIWDPRTGKCERTF-TGHSGPVTCIGLG-DSRFA-TG 665
Query: 333 SDDTNLRLW 341
S+D +R++
Sbjct: 666 SEDCEVRMY 674
Score = 56 (24.8 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 25/127 (19%), Positives = 52/127 (40%)
Query: 185 VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSP------ 238
+ +WN + I+++ VI + F + ++LA+ + D+++ +++ S
Sbjct: 411 IKVWNWRTGECISTYTGHRGGVIGLHF---DASILASGSVDKTVKIWNFEDKSTFSLRGH 467
Query: 239 -----------ARKVIMRANEDCNCYSYDSRKLDEAKCVHM--GHESAVMDIDYSPTGRE 285
+ + + A++DC +D LD C+ GH V + P RE
Sbjct: 468 TDWVNAVRVDTSSRTVFSASDDCTVRLWD---LDTKTCIRTFHGHVGQVQQV--VPLPRE 522
Query: 286 FVTGSYD 292
F +D
Sbjct: 523 FEFEEHD 529
Score = 42 (19.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 17/60 (28%), Positives = 24/60 (40%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKC--VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQY 300
I+ ED +D R KC GH V I + F TGS D +R++ +
Sbjct: 622 IVSGAEDRMIKIWDPRT---GKCERTFTGHSGPVTCIGLGDS--RFATGSEDCEVRMYSF 676
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 125 (49.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 58 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
Query: 119 TDGRILVSCGTDCTVKLWN 137
+D R +VS D T+KLWN
Sbjct: 115 SDNRQIVSGSRDKTIKLWN 133
Score = 101 (40.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VCQYS--GHQGAVRG 114
G L GH ++ +A P + S S D I +W + T + Q + GH V
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVAT 142
+ +S+DG+ +S D T++LW++ T
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGT 96
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G + + V CV+FS ++S
Sbjct: 102 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 162 NPIIVSCGWDKLVKVW 177
Score = 53 (23.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
K H+GH + + SP G +G D ++ N G+ +Y + + FS
Sbjct: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFS 242
Query: 324 CDASYVISGSDDTNLRLW 341
+ Y + + ++++W
Sbjct: 243 PNR-YWLCAATGPSIKIW 259
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 203
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 204 GSLCASGGKDGQAMLWDLNEGKHLYTL 230
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 125 (49.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 58 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
Query: 119 TDGRILVSCGTDCTVKLWN 137
+D R +VS D T+KLWN
Sbjct: 115 SDNRQIVSGSRDKTIKLWN 133
Score = 101 (40.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VCQYS--GHQGAVRG 114
G L GH ++ +A P + S S D I +W + T + Q + GH V
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVAT 142
+ +S+DG+ +S D T++LW++ T
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGT 96
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G + + V CV+FS ++S
Sbjct: 102 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 162 NPIIVSCGWDKLVKVW 177
Score = 53 (23.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
K H+GH + + SP G +G D ++ N G+ +Y + + FS
Sbjct: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFS 242
Query: 324 CDASYVISGSDDTNLRLW 341
+ Y + + ++++W
Sbjct: 243 PNR-YWLCAATGPSIKIW 259
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 203
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 204 GSLCASGGKDGQAMLWDLNEGKHLYTL 230
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 125 (49.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 58 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
Query: 119 TDGRILVSCGTDCTVKLWN 137
+D R +VS D T+KLWN
Sbjct: 115 SDNRQIVSGSRDKTIKLWN 133
Score = 101 (40.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VCQYS--GHQGAVRG 114
G L GH ++ +A P + S S D I +W + T + Q + GH V
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVAT 142
+ +S+DG+ +S D T++LW++ T
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGT 96
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G + + V CV+FS ++S
Sbjct: 102 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 162 NPIIVSCGWDKLVKVW 177
Score = 53 (23.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
K H+GH + + SP G +G D ++ N G+ +Y + + FS
Sbjct: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFS 242
Query: 324 CDASYVISGSDDTNLRLW 341
+ Y + + ++++W
Sbjct: 243 PNR-YWLCAATGPSIKIW 259
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 203
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 204 GSLCASGGKDGQAMLWDLNEGKHLYTL 230
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 125 (49.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 58 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
Query: 119 TDGRILVSCGTDCTVKLWN 137
+D R +VS D T+KLWN
Sbjct: 115 SDNRQIVSGSRDKTIKLWN 133
Score = 101 (40.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VCQYS--GHQGAVRG 114
G L GH ++ +A P + S S D I +W + T + Q + GH V
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVAT 142
+ +S+DG+ +S D T++LW++ T
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGT 96
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G + + V CV+FS ++S
Sbjct: 102 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 162 NPIIVSCGWDKLVKVW 177
Score = 53 (23.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
K H+GH + + SP G +G D ++ N G+ +Y + + FS
Sbjct: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFS 242
Query: 324 CDASYVISGSDDTNLRLW 341
+ Y + + ++++W
Sbjct: 243 PNR-YWLCAATGPSIKIW 259
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 203
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 204 GSLCASGGKDGQAMLWDLNEGKHLYTL 230
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 125 (49.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 58 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
Query: 119 TDGRILVSCGTDCTVKLWN 137
+D R +VS D T+KLWN
Sbjct: 115 SDNRQIVSGSRDKTIKLWN 133
Score = 101 (40.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VCQYS--GHQGAVRG 114
G L GH ++ +A P + S S D I +W + T + Q + GH V
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVAT 142
+ +S+DG+ +S D T++LW++ T
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGT 96
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G + + V CV+FS ++S
Sbjct: 102 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 162 NPIIVSCGWDKLVKVW 177
Score = 53 (23.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
K H+GH + + SP G +G D ++ N G+ +Y + + FS
Sbjct: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFS 242
Query: 324 CDASYVISGSDDTNLRLW 341
+ Y + + ++++W
Sbjct: 243 PNR-YWLCAATGPSIKIW 259
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 203
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 204 GSLCASGGKDGQAMLWDLNEGKHLYTL 230
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 125 (49.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 58 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
Query: 119 TDGRILVSCGTDCTVKLWN 137
+D R +VS D T+KLWN
Sbjct: 115 SDNRQIVSGSRDKTIKLWN 133
Score = 101 (40.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VCQYS--GHQGAVRG 114
G L GH ++ +A P + S S D I +W + T + Q + GH V
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVAT 142
+ +S+DG+ +S D T++LW++ T
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGT 96
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G + + V CV+FS ++S
Sbjct: 102 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 162 NPIIVSCGWDKLVKVW 177
Score = 53 (23.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
K H+GH + + SP G +G D ++ N G+ +Y + + FS
Sbjct: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFS 242
Query: 324 CDASYVISGSDDTNLRLW 341
+ Y + + ++++W
Sbjct: 243 PNR-YWLCAATGPSIKIW 259
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 203
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 204 GSLCASGGKDGQAMLWDLNEGKHLYTL 230
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 125 (49.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 58 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
Query: 119 TDGRILVSCGTDCTVKLWN 137
+D R +VS D T+KLWN
Sbjct: 115 SDNRQIVSGSRDKTIKLWN 133
Score = 101 (40.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VCQYS--GHQGAVRG 114
G L GH ++ +A P + S S D I +W + T + Q + GH V
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVAT 142
+ +S+DG+ +S D T++LW++ T
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGT 96
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G + + V CV+FS ++S
Sbjct: 102 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 162 NPIIVSCGWDKLVKVW 177
Score = 53 (23.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
K H+GH + + SP G +G D ++ N G+ +Y + + FS
Sbjct: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFS 242
Query: 324 CDASYVISGSDDTNLRLW 341
+ Y + + ++++W
Sbjct: 243 PNR-YWLCAATGPSIKIW 259
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 203
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 204 GSLCASGGKDGQAMLWDLNEGKHLYTL 230
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 125 (49.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 58 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
Query: 119 TDGRILVSCGTDCTVKLWN 137
+D R +VS D T+KLWN
Sbjct: 115 SDNRQIVSGSRDKTIKLWN 133
Score = 101 (40.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VCQYS--GHQGAVRG 114
G L GH ++ +A P + S S D I +W + T + Q + GH V
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVAT 142
+ +S+DG+ +S D T++LW++ T
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGT 96
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G + + V CV+FS ++S
Sbjct: 102 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 162 NPIIVSCGWDKLVKVW 177
Score = 53 (23.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
K H+GH + + SP G +G D ++ N G+ +Y + + FS
Sbjct: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFS 242
Query: 324 CDASYVISGSDDTNLRLW 341
+ Y + + ++++W
Sbjct: 243 PNR-YWLCAATGPSIKIW 259
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 203
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 204 GSLCASGGKDGQAMLWDLNEGKHLYTL 230
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 125 (49.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 58 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
Query: 119 TDGRILVSCGTDCTVKLWN 137
+D R +VS D T+KLWN
Sbjct: 115 SDNRQIVSGSRDKTIKLWN 133
Score = 101 (40.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VCQYS--GHQGAVRG 114
G L GH ++ +A P + S S D I +W + T + Q + GH V
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVAT 142
+ +S+DG+ +S D T++LW++ T
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGT 96
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G + + V CV+FS ++S
Sbjct: 102 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 162 NPIIVSCGWDKLVKVW 177
Score = 53 (23.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
K H+GH + + SP G +G D ++ N G+ +Y + + FS
Sbjct: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFS 242
Query: 324 CDASYVISGSDDTNLRLW 341
+ Y + + ++++W
Sbjct: 243 PNR-YWLCAATGPSIKIW 259
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 203
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 204 GSLCASGGKDGQAMLWDLNEGKHLYTL 230
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 125 (49.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 58 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
Query: 119 TDGRILVSCGTDCTVKLWN 137
+D R +VS D T+KLWN
Sbjct: 115 SDNRQIVSGSRDKTIKLWN 133
Score = 101 (40.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VCQYS--GHQGAVRG 114
G L GH ++ +A P + S S D I +W + T + Q + GH V
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVAT 142
+ +S+DG+ +S D T++LW++ T
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGT 96
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G + + V CV+FS ++S
Sbjct: 102 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 162 NPIIVSCGWDKLVKVW 177
Score = 53 (23.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
K H+GH + + SP G +G D ++ N G+ +Y + + FS
Sbjct: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFS 242
Query: 324 CDASYVISGSDDTNLRLW 341
+ Y + + ++++W
Sbjct: 243 PNR-YWLCAATGPSIKIW 259
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 203
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 204 GSLCASGGKDGQAMLWDLNEGKHLYTL 230
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 116 (45.9 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASY 328
GH+ V DI +S R V+ S D+T++IF+ R + VFC F+ +S
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHN-NYVFCCNFNPQSSL 185
Query: 329 VISGSDDTNLRLWKAK 344
V+SGS D ++R+W K
Sbjct: 186 VVSGSFDESVRIWDVK 201
Score = 103 (41.3 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 23/89 (25%), Positives = 39/89 (43%)
Query: 49 KLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGH 108
K+ +I L GH + + C NP SGS D +R+WD+ + H
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSL-VVSGSFDESVRIWDVKTGMCIKTLPAH 212
Query: 109 QGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
V ++ + DG ++ S D V++W+
Sbjct: 213 SDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 94 (38.1 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 277 IDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCV--KFSCDAS-YVISGS 333
+ +SP G+ + + D T++++ ++ G++ + Y T +C+ FS ++ISGS
Sbjct: 262 VKFSPNGKYILASNLDSTLKLWDFSKGKTLKQY-TGHENSKYCIFANFSVTGGKWIISGS 320
Query: 334 DDTNLRLWKAKASEQLGVLHPREQ 357
+D + +W + E + L Q
Sbjct: 321 EDCKIYIWNLQTREIVQCLEGHTQ 344
Score = 93 (37.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H V + ++ G +GSYD +RI+ G+ + V VKFS + Y+
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYI 271
Query: 330 ISGSDDTNLRLWKAKASEQLGVLHPREQRKH 360
++ + D+ L+LW + L E K+
Sbjct: 272 LASNLDSTLKLWDFSKGKTLKQYTGHENSKY 302
Score = 78 (32.5 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 22/71 (30%), Positives = 30/71 (42%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G S NPN SGS AN + +C GH ++ S G+ L +
Sbjct: 56 GASAQTPNPNAAGASASGS----------ANYKLMCTLEGHTKSISSAKFSPCGKYLGTS 105
Query: 128 GTDCTVKLWNV 138
D TVK+WN+
Sbjct: 106 SADKTVKIWNM 116
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 116 (45.9 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASY 328
GH+ V DI +S R V+ S D+T++IF+ R + VFC F+ +S
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHN-NYVFCCNFNPQSSL 185
Query: 329 VISGSDDTNLRLWKAK 344
V+SGS D ++R+W K
Sbjct: 186 VVSGSFDESVRIWDVK 201
Score = 103 (41.3 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 23/89 (25%), Positives = 39/89 (43%)
Query: 49 KLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGH 108
K+ +I L GH + + C NP SGS D +R+WD+ + H
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSL-VVSGSFDESVRIWDVKTGMCIKTLPAH 212
Query: 109 QGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
V ++ + DG ++ S D V++W+
Sbjct: 213 SDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 94 (38.1 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 277 IDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCV--KFSCDAS-YVISGS 333
+ +SP G+ + + D T++++ ++ G++ + Y T +C+ FS ++ISGS
Sbjct: 262 VKFSPNGKYILASNLDSTLKLWDFSKGKTLKQY-TGHENSKYCIFANFSVTGGKWIISGS 320
Query: 334 DDTNLRLWKAKASEQLGVLHPREQ 357
+D + +W + E + L Q
Sbjct: 321 EDCKIYIWNLQTREIVQCLEGHTQ 344
Score = 93 (37.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H V + ++ G +GSYD +RI+ G+ + V VKFS + Y+
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYI 271
Query: 330 ISGSDDTNLRLWKAKASEQLGVLHPREQRKH 360
++ + D+ L+LW + L E K+
Sbjct: 272 LASNLDSTLKLWDFSKGKTLKQYTGHENSKY 302
Score = 78 (32.5 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 22/71 (30%), Positives = 30/71 (42%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
G S NPN SGS AN + +C GH ++ S G+ L +
Sbjct: 56 GASAQTPNPNAAGASASGS----------ANYKLMCTLEGHTKSISSAKFSPCGKYLGTS 105
Query: 128 GTDCTVKLWNV 138
D TVK+WN+
Sbjct: 106 SADKTVKIWNM 116
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 118 (46.6 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 62 LDGHRDGISC--MAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
L GHRD I+ + + N+L + S DG I++WD + + GH+ + G+ V+
Sbjct: 139 LRGHRDQITSVKLLERSNHL---ITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNP 195
Query: 120 DGRILVSCGTDCTVKLWNVP 139
D L SC +D ++ W +P
Sbjct: 196 DETRLCSCTSDNQIRFWRIP 215
Score = 109 (43.4 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 71 CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTD 130
C++K+ L SG DG IR+W +++ + ++GH+G+V +T + G ILVS D
Sbjct: 66 CLSKDGALLA---SGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKD 122
Query: 131 CTVKLWNV 138
V +W++
Sbjct: 123 TEVIVWDI 130
Score = 88 (36.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 271 ESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVI 330
ES V+ + YS + D T++IF + + + ++ V C+ S D++ +I
Sbjct: 531 ESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLP-VMCLDISDDSTLII 589
Query: 331 SGSDDTNLRLW 341
+GS D N+++W
Sbjct: 590 TGSADKNIKIW 600
Score = 85 (35.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASY 328
GH+ VM +D S +TGS D+ I+I+ + G + + + V F +
Sbjct: 571 GHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHD-DSIMQVSFIPSTHH 629
Query: 329 VISGSDDTNLRLWKAKASEQL 349
IS S D ++ W A E +
Sbjct: 630 FISASKDKRIKYWDADKFEHI 650
Score = 84 (34.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 63 DGHRDGISCMAKNP--NYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
+GHR ++ M N N L SGS D ++ +WDI + + GH+ + + +
Sbjct: 98 NGHRGSVTTMTFNRLGNIL---VSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLER 154
Query: 121 GRILVSCGTDCTVKLWN 137
L++ D +K+W+
Sbjct: 155 SNHLITSSKDGFIKIWD 171
Score = 82 (33.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 85 GSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
G+ G I ++++A+ V H+G+V L ++ D R + S G D VK W+
Sbjct: 453 GTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWD 505
Score = 76 (31.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRI 297
P+ + A++D +D+ K + + + H V + G F++GS+DR+IRI
Sbjct: 625 PSTHHFISASKDKRIKYWDADKFEHIQTIE-AHHGEVWSLAMGSVGDFFISGSHDRSIRI 683
Query: 298 F 298
F
Sbjct: 684 F 684
Score = 73 (30.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 20/88 (22%), Positives = 44/88 (50%)
Query: 260 LDEAKCVH---MGHESAVMDIDYSPTGREFVTGSYDRTIRIF---QYNGGRSREIYHTKR 313
LD C H H+ ++M + + P+ F++ S D+ I+ + ++ ++ E +H +
Sbjct: 602 LDYGDC-HKSFFAHDDSIMQVSFIPSTHHFISASKDKRIKYWDADKFEHIQTIEAHHGE- 659
Query: 314 MQRVFCVKFSCDASYVISGSDDTNLRLW 341
V+ + + ISGS D ++R++
Sbjct: 660 ---VWSLAMGSVGDFFISGSHDRSIRIF 684
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 153 (58.9 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 63/307 (20%), Positives = 125/307 (40%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
++GH + C+A +P + F +GS D +++WD+A + +GH VR + VS
Sbjct: 135 INGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRH 194
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
L S D TVK W++ + ++++ DL ATA
Sbjct: 195 PYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTL------------DLIATA 242
Query: 182 GAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
G + +W+ P+ + + V+ P +P V++++ +D ++ L+D+ ++
Sbjct: 243 GRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSS-TDATVRLWDV-VAGKT 300
Query: 240 RKVIMRANEDCNC-------YSYDSRKLDEAKCVHMGHESAVMDIDYSPTG--------R 284
KV+ +S S D+ + + S + + + TG +
Sbjct: 301 MKVLTHHKRSVRATALHPKEFSVASACTDDIRSWGLAEGSLLTNFESEKTGIINTLSINQ 360
Query: 285 EFV--TGSYDRTIRIFQYNGGRSREIYHTKRM------QR-VFCVKFSCDASYVISGSDD 335
+ V G + + + Y G + T+ M +R V C F +I+G D
Sbjct: 361 DDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKTGLRLITGEAD 420
Query: 336 TNLRLWK 342
++++WK
Sbjct: 421 KSIKIWK 427
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 59/267 (22%), Positives = 116/267 (43%)
Query: 62 LDGH----RDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
L GH RD ++ ++P YL FS S D ++ WD+ + + Y GH VR +++
Sbjct: 178 LAGHVMTVRD-VAVSDRHP-YL---FSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSI 232
Query: 118 STDGRILVSCGTDCTVKLWN----VPVATLXXXXXXXXXXX-EPLAVYVWKNSFWAVDHQ 172
++ + G D +KLW+ +PV TL P+ V +S A
Sbjct: 233 HPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRL 292
Query: 173 WEGDLFATAGAQVDIWNHN----RSQPINSFQWGTDTVIS--VR-FNPAEPNVLATTASD 225
W+ AG + + H+ R+ ++ ++ + + +R + AE ++L S+
Sbjct: 293 WD----VVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDDIRSWGLAEGSLLTNFESE 348
Query: 226 RSITLYDLRMSSPARKVIMRANEDCNCYSYDS----RKLDEAKCV-HMGHESAVMDIDYS 280
++ + L ++ N + Y Y S + L + V + E +V+ +
Sbjct: 349 KTGIINTLSINQDDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFD 408
Query: 281 PTGREFVTGSYDRTIRIFQYNGGRSRE 307
TG +TG D++I+I++ + ++E
Sbjct: 409 KTGLRLITGEADKSIKIWKQDETATKE 435
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 141 (54.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 59 IGALDGHRDGISCMAKNPN-YLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
+G +GH +SC+ +PN + SGS D +++W++ N + C GH G V + V
Sbjct: 158 LGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAV 217
Query: 118 STDGRILVSCGTDCTVKLWNV 138
S DG + S G D LW++
Sbjct: 218 SPDGSLCASGGKDGVTLLWDL 238
Score = 127 (49.8 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
SGS DG++RLWD++ T ++ GH V + S D R +VS D T+KLWN
Sbjct: 92 SGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQIVSASRDRTIKLWN 145
Score = 65 (27.9 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 23/83 (27%), Positives = 35/83 (42%)
Query: 269 GHESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDA 326
GH V + +SP + V+GS+DRT++++ + R V V S D
Sbjct: 163 GHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLR-CNLEGHGGYVNAVAVSPDG 221
Query: 327 SYVISGSDDTNLRLWKAKASEQL 349
S SG D LW ++L
Sbjct: 222 SLCASGGKDGVTLLWDLAEGKRL 244
Score = 49 (22.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 17/91 (18%), Positives = 38/91 (41%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFS 323
+C GH V + SP G +G D ++ G+ +Y + + FS
Sbjct: 202 RCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGK--RLYSLDAGSIIHSLCFS 259
Query: 324 CDASYVISGSDDTNLRLWKAKASEQLGVLHP 354
+ ++ + + D+ +++W ++ + L P
Sbjct: 260 PNRYWLCAATQDS-IKIWDLESKHIVQDLKP 289
Score = 44 (20.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 277 IDYSPTGREFVTGSYDRTIRIFQYNG 302
+++S G G D TIRI++ +G
Sbjct: 304 LNWSADGSTLYAGYTDGTIRIYKISG 329
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 158 (60.7 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 57/270 (21%), Positives = 118/270 (43%)
Query: 88 DGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXX 147
+G I+LW + ++ H G VRG+ + VS G D +K+WN +
Sbjct: 20 NGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL 79
Query: 148 XXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVI 207
Y+ + +F+ ++ W L A+ + +WN + V+
Sbjct: 80 LGHLD-------YI-RTTFFHHEYPWI--LSASDDQTIRVWNWQSRTCVCVLTGHNHYVM 129
Query: 208 SVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKL---DEAK 264
+F+P+E +++ + + D+++ ++D+ S +K + + + L +A
Sbjct: 130 CAQFHPSE-DLVVSASLDQTVRVWDI--SGLRKKNLSPGAVESDVRGITGVDLFGTTDAV 186
Query: 265 CVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVK 321
H+ GH+ V + PT V+G+ DR ++I++ N ++ E+ + V C
Sbjct: 187 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAV 246
Query: 322 FSCDASYVISGSDDTNLRLWKAKASEQLGV 351
F ++S S+D ++R+W S++ GV
Sbjct: 247 FHPRQELILSNSEDKSIRVWDM--SKRTGV 274
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 125 (49.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFF--SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
AL GH +S + + + G F SGS DG +RLWD+ T ++ GH V + S
Sbjct: 17 ALRGHSHFVSDVVISSD---GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 73
Query: 119 TDGRILVSCGTDCTVKLWN 137
+D R +VS D T+KLWN
Sbjct: 74 SDNRQIVSGSRDKTIKLWN 92
Score = 112 (44.5 bits), Expect = 0.00032, P = 0.00032
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS--REIYHTKRMQRVFCVKFSCDA 326
GH V D+ S G+ ++GS+D T+R++ G + R + HTK V V FS D
Sbjct: 20 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD---VLSVAFSSDN 76
Query: 327 SYVISGSDDTNLRLW 341
++SGS D ++LW
Sbjct: 77 RQIVSGSRDKTIKLW 91
Score = 111 (44.1 bits), Expect = 0.00042, P = 0.00042
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 63 DGHRDGISCMAKNPNYLKGFF-SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+ H + +SC+ +PN S D +++W++AN + + GH G + +TVS DG
Sbjct: 104 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDG 163
Query: 122 RILVSCGTDCTVKLWNV 138
+ S G D LW++
Sbjct: 164 SLCASGGKDGQAMLWDL 180
Score = 94 (38.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS 327
+GH V+ + +S R+ V+GS D+TI+++ G + + V CV+FS ++S
Sbjct: 61 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 120
Query: 328 --YVISGSDDTNLRLW 341
++S D +++W
Sbjct: 121 NPIIVSCGWDKLVKVW 136
Score = 65 (27.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 107 GHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
GH V + +S+DG+ +S D T++LW++ T
Sbjct: 20 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT 55
Score = 51 (23.0 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 270 HESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCD 325
H V + +SP V+ +D+ ++++ + + I HT + V S D
Sbjct: 106 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV---TVSPD 162
Query: 326 ASYVISGSDDTNLRLWKAKASEQLGVL 352
S SG D LW + L L
Sbjct: 163 GSLCASGGKDGQAMLWDLNEGKHLYTL 189
Score = 50 (22.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGR 304
K H+GH + + SP G +G D ++ N G+
Sbjct: 144 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 184
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 128 (50.1 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 44/175 (25%), Positives = 81/175 (46%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH DG+ + N L F+GS D I +WD+ + + + SGH V+ T+ D R
Sbjct: 300 GHMDGVLTLQFNYRLL---FTGSYDSTIGIWDLFTGKLIRRLSGHSDGVK--TLYFDDRK 354
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVW-KNSFWAVDHQWEGDLFATAG 182
L++ D T+++WN E ++ Y +S +VD + + +A
Sbjct: 355 LITGSLDKTIRVWNY-------------ITGECISTYRGHSDSVLSVDSYQKVIVSGSAD 401
Query: 183 AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSS 237
V +W H S+ + + T+ V V+ +P + + + D +I ++D+R +S
Sbjct: 402 KTVKVW-HVESRTCYTLRGHTEWVNCVKLHPKSFSCFSCS-DDTTIRMWDIRTNS 454
Score = 122 (48.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 29/90 (32%), Positives = 46/90 (51%)
Query: 53 IFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAV 112
+F I L GH DG+ + + L +GS+D IR+W+ + Y GH +V
Sbjct: 329 LFTGKLIRRLSGHSDGVKTLYFDDRKL---ITGSLDKTIRVWNYITGECISTYRGHSDSV 385
Query: 113 RGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
L+V + +++VS D TVK+W+V T
Sbjct: 386 --LSVDSYQKVIVSGSADKTVKVWHVESRT 413
Score = 72 (30.4 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 264 KCVH--MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQR 316
KC+ GH V DI + ++GS+D +I+++ G+ ++ +R+QR
Sbjct: 543 KCIRTQFGHVEGVWDI--AADNFRIISGSHDGSIKVWDLQSGKCMHTFNGRRLQR 595
Score = 57 (25.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 17/93 (18%), Positives = 43/93 (46%)
Query: 271 ESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVI 330
+ V+D + P ++ D TI+++ G+ ++ V+ + + D +I
Sbjct: 511 QETVLD-ENIPYPTHLLSCGLDNTIKLWDVKTGKCIRTQFG-HVEGVWDI--AADNFRII 566
Query: 331 SGSDDTNLRLWKAKASEQLGVLHPREQRKHAYH 363
SGS D ++++W ++ + + + R ++ H
Sbjct: 567 SGSHDGSIKVWDLQSGKCMHTFNGRRLQRETQH 599
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 149 (57.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 56/263 (21%), Positives = 109/263 (41%)
Query: 106 SGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNS 165
+GH A+ + S +G L S D + +W +A
Sbjct: 36 AGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVA------- 88
Query: 166 FWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASD 225
W+ D + A+ + +W+ + + + + +D V FNP N++ + + D
Sbjct: 89 -WSSDSSRL--VSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPS-NLIVSGSFD 144
Query: 226 RSITLYDLRMSSPARKV------IMRANEDCN-----CYSYDS--RKLDEA--KCVH-MG 269
S+ +++++ + + I N +CN SYD R D A +C+ +
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLA 204
Query: 270 HES--AVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCV--KFSCD 325
E V + +SP G+ +T + D T++++ Y+ GR + Y T +C+ FS
Sbjct: 205 DEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY-TGHKNEKYCLFASFSVT 263
Query: 326 A-SYVISGSDDTNLRLWKAKASE 347
+V+SGS+D + +W + E
Sbjct: 264 GRKWVVSGSEDNMVYIWNLQTKE 286
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 222 TASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHM--GHESAVMDIDY 279
T S+ + D+ SS + +++ A++D +D R KC+ GH V D+
Sbjct: 76 TLYGHSLEISDVAWSSDSSRLVS-ASDDKTLKVWDMRS---GKCLKTLKGHSDFVFCCDF 131
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
+P V+GS+D +++I++ G+ + + + V F+C+ S ++SGS D R
Sbjct: 132 NPPSNLIVSGSFDESVKIWEVKTGKCLKTL-SAHSDPISAVNFNCNGSLIVSGSYDGLCR 190
Query: 340 LWKAKASEQLGVL 352
+W A + + L L
Sbjct: 191 IWDAASGQCLRTL 203
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 48/190 (25%), Positives = 83/190 (43%)
Query: 47 AAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANR---RTVC 103
+ K+ ++ + L H D IS + N N SGS DG R+WD A+ RT+
Sbjct: 146 SVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSL-IVSGSYDGLCRIWDAASGQCLRTLA 204
Query: 104 QYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWK 163
G+ V + S +G+ +++ D T+KLW+ E ++
Sbjct: 205 D-EGNP-PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKN--EKYCLFA-- 258
Query: 164 NSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTA 223
SF +W + + V IWN + + Q TD VIS +P + N++A+ A
Sbjct: 259 -SFSVTGRKWV--VSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTK-NIIASAA 314
Query: 224 --SDRSITLY 231
+D++I ++
Sbjct: 315 LENDKTIKVW 324
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 136 (52.9 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 36/125 (28%), Positives = 57/125 (45%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKC--VHMGHESAVMDIDYSPTGREFVTGSYDRT 294
+P ++ + D + +D R E C GHES + I + P G F TGS D T
Sbjct: 193 APDTRLFVSGACDASAKLWDVR---EGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 249
Query: 295 IRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLH 353
R+F + +Y H + + V FS +++G DD N +W A +++ GVL
Sbjct: 250 CRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA 309
Query: 354 PREQR 358
+ R
Sbjct: 310 GHDNR 314
Score = 106 (42.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 139 LAGHTGYLSCCRFLDDNQI---VTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
R+ VS D + KLW+V
Sbjct: 196 TRLFVSGACDASAKLWDV 213
Score = 105 (42.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 27/109 (24%), Positives = 52/109 (47%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P R FV+G+ D + +++
Sbjct: 157 IVTSSGDTTCALWDI-ETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
G R+ + T + + F + + +GSDD RL+ +A ++L V
Sbjct: 216 GMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMV 263
Score = 67 (28.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 25/108 (23%), Positives = 46/108 (42%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDID---YSPTGREFVTGSYDRT 294
P ++D C +D R D+ V+ H++ + I +S +GR + G D
Sbjct: 236 PNGNAFATGSDDATCRLFDLRA-DQELMVY-SHDNIICGITSVAFSKSGRLLLAGYDDFN 293
Query: 295 IRIFQ-YNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
++ R+ + RV C+ + D V +GS D+ L++W
Sbjct: 294 CNVWDALKADRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 40 (19.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 12/55 (21%), Positives = 19/55 (34%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
S S DG + +WD V V + G + G D ++N+
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 144 (55.7 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 39/145 (26%), Positives = 64/145 (44%)
Query: 207 ISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANED--CNCYSYDSRKLDEAK 264
I++ N + + T S T+Y S P K ++ +ED +S D+ A
Sbjct: 505 IALNNNDKDEDPTCKTLVGHSGTVYSTSFS-PDNKYLLSGSEDKTVRLWSMDTHT---AL 560
Query: 265 CVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSC 324
+ GH V D+ +SP G F T S+D+T R++ + I+ + V CV F
Sbjct: 561 VSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIF-AGHLNDVDCVSFHP 619
Query: 325 DASYVISGSDDTNLRLWKAKASEQL 349
+ YV +GS D R+W + +
Sbjct: 620 NGCYVFTGSSDKTCRMWDVSTGDSV 644
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGH-QGAVRGLTVSTDGR 122
GH + +A P+ + +GS DG I +WDI + + Q GH + A+ L+ S +G
Sbjct: 649 GHTAPVISIAVCPDG-RWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGN 707
Query: 123 ILVSCGTDCTVKLWNVPVAT 142
+L+S G D TV++W++ AT
Sbjct: 708 VLISGGADHTVRVWDLKKAT 727
Score = 109 (43.4 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 25/102 (24%), Positives = 46/102 (45%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
+ + D C +D D + + +GH + V+ I P GR TGS D I ++
Sbjct: 624 VFTGSSDKTCRMWDVSTGDSVR-LFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGT 682
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
G+ + ++ + +S + + +ISG D +R+W K
Sbjct: 683 GKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLK 724
Score = 94 (38.1 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 57 PFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLT 116
P L GH + + +P+ K SGS D +RLW + + Y GH V ++
Sbjct: 516 PTCKTLVGHSGTVYSTSFSPDN-KYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVS 574
Query: 117 VSTDGRILVSCGTDCTVKLWN 137
S G + D T +LW+
Sbjct: 575 FSPLGHYFATASHDQTARLWS 595
Score = 82 (33.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 22/86 (25%), Positives = 41/86 (47%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFS 323
+ GH + V + + P G TGS D+T R++ + G S ++ HT V +
Sbjct: 604 IFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAP---VISIAVC 660
Query: 324 CDASYVISGSDDTNLRLWKAKASEQL 349
D ++ +GS+D + +W ++L
Sbjct: 661 PDGRWLSTGSEDGIINVWDIGTGKRL 686
Score = 56 (24.8 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 33/165 (20%), Positives = 67/165 (40%)
Query: 101 TVCQYSGHQGAVRGLTV---STDGRILVSCGTDCTVKLWNVPVATLXX---XXXXXXXXX 154
+VC Y+ Q + ++ S D RI + D +K+W++ ++L
Sbjct: 456 SVCMYT-FQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDE 514
Query: 155 EPLAVYVWKNSFWAVDHQWEGD-LFATAGAQ---VDIWNHNRSQPINSFQWGTDTVISVR 210
+P + +S + D + +G++ V +W+ + + S++ V V
Sbjct: 515 DPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVS 574
Query: 211 FNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSY 255
F+P + AT + D++ L+ P R N D +C S+
Sbjct: 575 FSPLG-HYFATASHDQTARLWSCDHIYPLRIFAGHLN-DVDCVSF 617
Score = 40 (19.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 69 ISCMAKNPNYLKGFF 83
++ +AKNP Y + FF
Sbjct: 187 LNLVAKNPVYARRFF 201
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 65/286 (22%), Positives = 119/286 (41%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD- 120
L HRD ++C+A +P + SGS D I++WD GH V GL
Sbjct: 110 LTSHRDAVTCVAFHPVFTS-LASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQK 168
Query: 121 GR-ILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAV-YVWKNSFWAVDHQWEGDLF 178
G +L SC +D T+KLW+ P +V ++ N + +G L
Sbjct: 169 GNTLLASCSSDLTIKLWD-PSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTL- 226
Query: 179 ATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPA-EPNVLATTASDRSITLYDLRMSS 237
IW+ + + + T++ I +P+ + L + D++IT++++ +
Sbjct: 227 -------RIWDVSTGFCVKVIKSATESWIR-DVSPSFDGKWLVSGGRDQAITVWEVSSAE 278
Query: 238 PARKVIMRANE-DCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV-TGSYDRTI 295
P ++ N +C ++ A H+ + + + + EFV TG+ D+TI
Sbjct: 279 PKAALLGHENFIECCVFA------PPASYEHLATLAGLKKPPPATSSCEFVATGARDKTI 332
Query: 296 RIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
++++ G + ++ R F Y+ S SDD +R W
Sbjct: 333 KLWEARGRLIKTLHGHDNWVRGLV--FHPGGKYLFSVSDDKTIRCW 376
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 63/258 (24%), Positives = 102/258 (39%)
Query: 59 IGALDGHRDGISC---MAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQY-SGHQGAVRG 114
I L GH +S + N N+L S S DG +R+WD++ V S + +R
Sbjct: 194 IRTLSGHDHSVSSVRFLTSNDNHL---ISASRDGTLRIWDVSTGFCVKVIKSATESWIRD 250
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXE-----PLAVYVWKNSFWAV 169
++ S DG+ LVS G D + +W V A E P A Y + +
Sbjct: 251 VSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLATLAGL 310
Query: 170 DHQWEGDL---FATAGAQ---VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTA 223
F GA+ + +W R + I + + V + F+P L + +
Sbjct: 311 KKPPPATSSCEFVATGARDKTIKLWEA-RGRLIKTLHGHDNWVRGLVFHPGG-KYLFSVS 368
Query: 224 SDRSITLYDLRMSSPARKVIMRANED-CNCYSY-DSRKLDEAKCVHMGHESAVMDIDYSP 281
D++I +DL K I A+E +C + S D G ++ D P
Sbjct: 369 DDKTIRCWDLSQEGRLVKTISGAHEHFVSCIRWAPSPNTDNPDPA--GEKAGKKDA-VKP 425
Query: 282 TGREFV-TGSYDRTIRIF 298
+ R + TG D ++R+F
Sbjct: 426 SYRCVIATGCADNSVRVF 443
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 65/286 (22%), Positives = 119/286 (41%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD- 120
L HRD ++C+A +P + SGS D I++WD GH V GL
Sbjct: 110 LTSHRDAVTCVAFHPVFTS-LASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQK 168
Query: 121 GR-ILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAV-YVWKNSFWAVDHQWEGDLF 178
G +L SC +D T+KLW+ P +V ++ N + +G L
Sbjct: 169 GNTLLASCSSDLTIKLWD-PSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTL- 226
Query: 179 ATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPA-EPNVLATTASDRSITLYDLRMSS 237
IW+ + + + T++ I +P+ + L + D++IT++++ +
Sbjct: 227 -------RIWDVSTGFCVKVIKSATESWIR-DVSPSFDGKWLVSGGRDQAITVWEVSSAE 278
Query: 238 PARKVIMRANE-DCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV-TGSYDRTI 295
P ++ N +C ++ A H+ + + + + EFV TG+ D+TI
Sbjct: 279 PKAALLGHENFIECCVFA------PPASYEHLATLAGLKKPPPATSSCEFVATGARDKTI 332
Query: 296 RIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
++++ G + ++ R F Y+ S SDD +R W
Sbjct: 333 KLWEARGRLIKTLHGHDNWVRGLV--FHPGGKYLFSVSDDKTIRCW 376
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 63/258 (24%), Positives = 102/258 (39%)
Query: 59 IGALDGHRDGISC---MAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQY-SGHQGAVRG 114
I L GH +S + N N+L S S DG +R+WD++ V S + +R
Sbjct: 194 IRTLSGHDHSVSSVRFLTSNDNHL---ISASRDGTLRIWDVSTGFCVKVIKSATESWIRD 250
Query: 115 LTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXE-----PLAVYVWKNSFWAV 169
++ S DG+ LVS G D + +W V A E P A Y + +
Sbjct: 251 VSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLATLAGL 310
Query: 170 DHQWEGDL---FATAGAQ---VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTA 223
F GA+ + +W R + I + + V + F+P L + +
Sbjct: 311 KKPPPATSSCEFVATGARDKTIKLWEA-RGRLIKTLHGHDNWVRGLVFHPGG-KYLFSVS 368
Query: 224 SDRSITLYDLRMSSPARKVIMRANED-CNCYSY-DSRKLDEAKCVHMGHESAVMDIDYSP 281
D++I +DL K I A+E +C + S D G ++ D P
Sbjct: 369 DDKTIRCWDLSQEGRLVKTISGAHEHFVSCIRWAPSPNTDNPDPA--GEKAGKKDA-VKP 425
Query: 282 TGREFV-TGSYDRTIRIF 298
+ R + TG D ++R+F
Sbjct: 426 SYRCVIATGCADNSVRVF 443
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 133 (51.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 43/181 (23%), Positives = 77/181 (42%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS--- 118
L GH D + + + + K SGS D +WD+ + ++ Q +GH G + + +
Sbjct: 420 LRGHEDLVMSVDVSADG-KHIISGSRDKSAMIWDLEKKESIAQLTGHTGVISCVALPKKP 478
Query: 119 TDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWK----NSFWAVDHQWE 174
+ ++ D T+KLW T + ++ V K ++
Sbjct: 479 STSMFAITASDDRTIKLWKGFSTTSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAPN 538
Query: 175 GDLFATAG--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD 232
+FATA + V +WN N +PI S + V V F+P + L T ++D +I ++
Sbjct: 539 DKIFATASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCFL-TCSADGTIKIWS 597
Query: 233 L 233
L
Sbjct: 598 L 598
Score = 104 (41.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 27/115 (23%), Positives = 54/115 (46%)
Query: 230 LYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTG 289
+ D++ + ++ + + Y ++++ V GHE VM +D S G+ ++G
Sbjct: 387 IIDIKYINDDNIIVATNSNEIKTYDLNTKRAQ----VLRGHEDLVMSVDVSADGKHIISG 442
Query: 290 SYDRTIRIFQYNGGRS-REIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
S D++ I+ S ++ HT + V K + + I+ SDD ++LWK
Sbjct: 443 SRDKSAMIWDLEKKESIAQLTGHTGVISCVALPKKPSTSMFAITASDDRTIKLWK 497
Score = 94 (38.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 65 HRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRIL 124
H D ++ + +P LK + +D +IR++D+ + V + H + G+T S G+ L
Sbjct: 169 HDDVVTMLKFHPTLLK-LVTVCLDLNIRVYDLVTKECVI-LTNHLSQISGITFSNSGKEL 226
Query: 125 VSCGTDCTVKLWNV 138
+S G D + +W++
Sbjct: 227 ISSGRDKVLNVWDM 240
Score = 93 (37.8 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 27/128 (21%), Positives = 56/128 (43%)
Query: 225 DRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGR 284
D++ TLY + + I+ + N Y+ + L+ + +G+ ++DI Y
Sbjct: 339 DKTDTLYTISSIINNKDKIISITSEHNLLIYNGKTLERQGEI-IGYNDEIIDIKYI-NDD 396
Query: 285 EFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
+ + I+ + N R++ + + + V V S D ++ISGS D + +W +
Sbjct: 397 NIIVATNSNEIKTYDLNTKRAQVLRGHEDL--VMSVDVSADGKHIISGSRDKSAMIWDLE 454
Query: 345 ASEQLGVL 352
E + L
Sbjct: 455 KKESIAQL 462
Score = 90 (36.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 69 ISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCG 128
IS A +PN + G + I+ + I ++ V + GH+G + + + + G I+ S
Sbjct: 90 ISTFALSPNN-EEILIGCSNLQIKQYRIEDQSLVKIWKGHEGPINEIDIHSSGNIVASAS 148
Query: 129 TDCTVKLWNV 138
+D TVK+W++
Sbjct: 149 SDKTVKVWDL 158
Score = 86 (35.3 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 44/163 (26%), Positives = 74/163 (45%)
Query: 187 IWNHNRSQPINSFQWGTDTVISVRFNPAEPN--VLATTASD-RSITLYDLRMSSPARKVI 243
IW+ + + I G VIS P +P+ + A TASD R+I L+ S+ +
Sbjct: 450 IWDLEKKESIAQLT-GHTGVISCVALPKKPSTSMFAITASDDRTIKLWK-GFSTTSS--- 504
Query: 244 MRANEDCNCYSYDSRKLDE---AKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQY 300
+ D DS+K D+ A + HE + I +P + F T S D ++++
Sbjct: 505 --SGGD------DSKKKDKKISASVTKIAHEKDINSISIAPNDKIFATASQDSYVKLWNV 556
Query: 301 NGGRSREIYHTKRMQR-VFCVKFS-CDASYVISGSDDTNLRLW 341
N I K +R V+ V+FS D ++ +D T +++W
Sbjct: 557 NN--LEPITSIKAHRRGVWHVEFSPIDQCFLTCSADGT-IKIW 596
Score = 84 (34.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/140 (22%), Positives = 56/140 (40%)
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVH-MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQY 300
++ A+ D +D L++ C H H+ V + + PT + VT D IR++
Sbjct: 143 IVASASSDKTVKVWD---LEKGYCTHNFQHDDVVTMLKFHPTLLKLVTVCLDLNIRVYDL 199
Query: 301 NGGRSRE-IYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQRK 359
++E + T + ++ + FS +IS D L +W + + P Q
Sbjct: 200 V---TKECVILTNHLSQISGITFSNSGKELISSGRDKVLNVWDMLSKNPKKTI-PIYQEL 255
Query: 360 HAYHEAVKNRYKHLPEIKRI 379
K Y LPE +I
Sbjct: 256 GGIITLPKESYNSLPENSKI 275
Score = 82 (33.9 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 25/122 (20%), Positives = 51/122 (41%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
+P K+ A++D ++ L+ + H V +++SP + F+T S D TI+
Sbjct: 536 APNDKIFATASQDSYVKLWNVNNLEPITSIK-AHRRGVWHVEFSPIDQCFLTCSADGTIK 594
Query: 297 IFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE 356
I+ + + + V F ++S + + ++LW K +E L E
Sbjct: 595 IWSLSDYTCLKTLEGHKGS-VLKASFISFGMQIVSVASEGLIKLWNIKTNECLNTFEGHE 653
Query: 357 QR 358
+
Sbjct: 654 SK 655
Score = 69 (29.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 16/96 (16%), Positives = 41/96 (42%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASY 328
GH+ +V+ + G + V+ + + I+++ + +++ + + D
Sbjct: 609 GHKGSVLKASFISFGMQIVSVASEGLIKLWNIKTNECLNTFEGHE-SKIWALSVAKDQER 667
Query: 329 VISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHE 364
I+G D+ L WK +L + +E+ + Y +
Sbjct: 668 FITGGSDSKLIAWKDHTEIELEIQKKKEENQVLYKQ 703
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 63 DGHRDGISCMAKNPNYLKG-FFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+GHRD +SC+ +PN L+ S S D +++W+++N + +GH G V + VS DG
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 122 RILVSCGTDCTVKLWNV 138
+ S G D V LW++
Sbjct: 207 SLCASGGKDGVVLLWDL 223
Score = 122 (48.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
SGS DG++RLWD+A + ++ GH V + S D R +VS D T+KLWN
Sbjct: 80 SGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 133
Score = 84 (34.6 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 268 MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQR--VFCVKFSCD 325
+GH V+ + +S R+ V+ S DRTI+++ G I R V CV+FS +
Sbjct: 102 VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 161
Query: 326 ASY--VISGSDDTNLRLW 341
++S S D +++W
Sbjct: 162 TLQPTIVSASWDKTVKVW 179
Score = 73 (30.8 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRT---VCQ--YSGHQGAVRG 114
G + H D ++ +A + S S D I LW + V Q +GH V
Sbjct: 9 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVED 68
Query: 115 LTVSTDGRILVSCGTDCTVKLWNV 138
+ +S+DG+ +S D ++LW++
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDL 92
Score = 68 (29.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 269 GHESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSC 324
GH V + +SP + V+ S+D+T++++ + + R HT V V S
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY---VSTVAVSP 204
Query: 325 DASYVISGSDDTNLRLWKAKASEQL 349
D S SG D + LW ++L
Sbjct: 205 DGSLCASGGKDGVVLLWDLAEGKKL 229
Score = 56 (24.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 35/162 (21%), Positives = 69/162 (42%)
Query: 185 VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVI- 243
V +WN + + ++ T V +V +P + ++ A+ D + L+DL + +K+
Sbjct: 176 VKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDL---AEGKKLYS 231
Query: 244 MRANEDCN--CYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYN 301
+ AN + C+S + L C H + D++ + + N
Sbjct: 232 LEANSVIHALCFSPNRYWL----CAATEHGIKIWDLESKSIVEDLKVDLKAEAEKAD--N 285
Query: 302 GGRSREIYHTKRMQRVFC--VKFSCDASYVISGSDDTNLRLW 341
G + TKR + ++C + +S D S + SG D +R+W
Sbjct: 286 SGPAA----TKR-KVIYCTSLNWSADGSTLFSGYTDGVIRVW 322
>UNIPROTKB|Q17BB0 [details] [associations]
symbol:AAEL005041 "Ribosome biogenesis protein WDR12
homolog" species:7159 "Aedes aegypti" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 EMBL:CH477324 RefSeq:XP_001650205.1
ProteinModelPortal:Q17BB0 STRING:Q17BB0
EnsemblMetazoa:AAEL005041-RA GeneID:5565845
KEGG:aag:AaeL_AAEL005041 VectorBase:AAEL005041 HOGENOM:HOG000264464
OMA:LQTRFFT OrthoDB:EOG4BNZTB PhylomeDB:Q17BB0 HAMAP:MF_03029
Uniprot:Q17BB0
Length = 427
Score = 109 (43.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 229 TLYDLRMSSPARKVIMRANEDCNCYSYD--SRKLDEAKCVHMGHESAVMDIDYSPTGRE- 285
+ +DL S +I+ A+ D N YD S + K ++GH V + +S T
Sbjct: 304 SFFDLSYSH-LNGLIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYL 362
Query: 286 FVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
FV+G+YD ++++ Y ++ +V +S + +++SG D ++R++K+K
Sbjct: 363 FVSGAYDNHVKLWDYRSPKAPIFELIGHEDKVLACDWS-NPKFILSGGSDNSVRVFKSK 420
Score = 86 (35.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 38/190 (20%), Positives = 73/190 (38%)
Query: 65 HRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLT-VSTDGR- 122
H D +S + N++ +G D + +W + + GH V+G+T +S D
Sbjct: 110 HDDWVSAVEAKDNWI---LTGCYDNTLNIWTTKGKHKLT-IPGHIAPVKGVTWISLDEEK 165
Query: 123 -ILVSCGTDCTVKLW--NVPVATLXXXXX-----------XXXXXXEPLAVYVWKN--SF 166
+ S D TV LW NV ++ +A W
Sbjct: 166 GVFASASQDQTVMLWEWNVKANSVECVQVCKGHERGVDCIAANRSKTRMATGSWDTMLKI 225
Query: 167 WAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDR 226
W+ D + +GD + + + P+ + + + V++ + N L T++ D
Sbjct: 226 WSTDVRNDGDSQPSTSKRQKLDTEKARTPVLTLAGHRECISGVQW--IDDNTLVTSSWDH 283
Query: 227 SITLYDLRMS 236
+I ++DL +S
Sbjct: 284 TIKIWDLALS 293
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 44/156 (28%), Positives = 67/156 (42%)
Query: 83 FSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVA 141
FSG +D I +WDI + V +GH + L VS D + L+S D TV+ W++ P A
Sbjct: 209 FSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFA 268
Query: 142 TLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWE--GDLFATAGAQ--VDIWNHNRSQPIN 197
P+ + KN A W GD A V +W+ + +
Sbjct: 269 PTNRHIRTYDGA--PVGLE--KNLIRA---SWNPAGDKIAAGSGDRSVVVWDFKTGKILY 321
Query: 198 SFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
TV VRF P ++ + +SDR++ L +L
Sbjct: 322 KLPGHKGTVNDVRFTPNNEPIIVSASSDRNLMLGEL 357
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 42/187 (22%), Positives = 81/187 (43%)
Query: 60 GALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
G L GH+ I + + + K FS S D + WDI + + + +Y GH+ + + +S
Sbjct: 103 GILSGHKGAILDLQWSRDS-KTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISK 161
Query: 120 DGR-ILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLF 178
G+ +LVS D T+ +W+ P E + + AV G+
Sbjct: 162 RGQEMLVSASDDGTMGIWD-P------------RQKEAIDYLETELPITAVAQSEAGNEV 208
Query: 179 ATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMS 236
+ G + +W+ + + S DT+ S+ +P + L + + D ++ +D+R
Sbjct: 209 FSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSP-DSQTLLSNSFDSTVRTWDIRPF 267
Query: 237 SPARKVI 243
+P + I
Sbjct: 268 APTNRHI 274
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 117 (46.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 64 GHRDGISCMAKNPNYLKGFF-SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGR 122
GH + +SC+ +PN S D +++W++A+ R + GH G + +T+S DG
Sbjct: 146 GHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGS 205
Query: 123 ILVSCGTDCTVKLWNV 138
+ S G D LW++
Sbjct: 206 LCASGGKDGVTMLWDL 221
Score = 116 (45.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 61 ALDGHRDGIS-CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
+L+GH +S C+ + S S D +RLW++++ +T + GH V ++ S
Sbjct: 58 SLEGHSHIVSDCVISSDGAYA--LSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSA 115
Query: 120 DGRILVSCGTDCTVKLWN 137
D R +VS D T+KLWN
Sbjct: 116 DNRQIVSGSRDRTIKLWN 133
Score = 115 (45.5 bits), Expect = 0.00078, Sum P(2) = 0.00077
Identities = 29/102 (28%), Positives = 48/102 (47%)
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYN 301
+I D Y Y R L+ GH V D S G ++ S+D+++R+++ +
Sbjct: 41 IIWNLTRDEQAYGYPKRSLE-------GHSHIVSDCVISSDGAYALSASWDKSLRLWELS 93
Query: 302 GGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
G++ + HT V V FS D ++SGS D ++LW
Sbjct: 94 SGQTTRTFVGHTND---VLSVSFSADNRQIVSGSRDRTIKLW 132
Score = 73 (30.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 27/104 (25%), Positives = 44/104 (42%)
Query: 269 GHESAVMDIDYSPTGRE--FVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDA 326
GH V + +SP + V+ +D+ +++++ R + H + V S D
Sbjct: 146 GHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRL-QTDHIGHTGYINTVTISPDG 204
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHEAVKNRY 370
S SG D LW S+ L LH ++ HA + NRY
Sbjct: 205 SLCASGGKDGVTMLWDLNESKHLYSLHAGDEI-HALVFS-PNRY 246
Score = 60 (26.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 16/88 (18%), Positives = 37/88 (42%)
Query: 267 HMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDA 326
H+GH + + SP G +G D ++ N S+ +Y + + FS +
Sbjct: 188 HIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLN--ESKHLYSLHAGDEIHALVFSPNR 245
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVLHP 354
Y + + +++ ++ + ++ L P
Sbjct: 246 -YWLCAATSSSITIFDLEKKSKVDELKP 272
Score = 43 (20.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/93 (23%), Positives = 39/93 (41%)
Query: 260 LDEAK---CVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGG------RSREIYH 310
L+E+K +H G E + + +SP R ++ + +I IF + I
Sbjct: 221 LNESKHLYSLHAGDE--IHALVFSPN-RYWLCAATSSSITIFDLEKKSKVDELKPEYIEK 277
Query: 311 TKRMQRVFCVK--FSCDASYVISGSDDTNLRLW 341
K+ + CV +S D + +G D +R W
Sbjct: 278 GKKSREPECVSLAWSADGQTLFAGYTDNKIRAW 310
Score = 38 (18.4 bits), Expect = 0.00078, Sum P(2) = 0.00077
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 206 VISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
V S+ + PN+L + + D+++ +++L A
Sbjct: 18 VTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQA 51
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 147 (56.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 232 DLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSY 291
DL SS + A++DC +D+R E V GH + V ++++P V+GS+
Sbjct: 90 DLAWSSDSHYTCS-ASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSF 148
Query: 292 DRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
D TIRI++ G+ + M + V F+ D S ++S S D + ++W AK L
Sbjct: 149 DETIRIWEVKTGKCVRMIKAHSMP-ISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKT 207
Query: 352 L 352
L
Sbjct: 208 L 208
Score = 147 (56.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 80/315 (25%), Positives = 123/315 (39%)
Query: 56 RPF--IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVR 113
+P+ + L+GH ISC+ K N S S+D + LW N + +Y GH +
Sbjct: 31 KPYRHLKTLEGHTAAISCV-KFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGIS 89
Query: 114 GLTVSTDGRILVSCGTDCTVKLWNV--PVATLXXXXXXXXXXX----EPLAVYVWKNSFW 167
L S+D S DCT+++W+ P L P + + SF
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 168 AVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTD--TVISVR-------FNPAEPNV 218
WE T I H S PI+S + D ++S ++ E
Sbjct: 150 ETIRIWE---VKTGKCVRMIKAH--SMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTC 204
Query: 219 LATTASDRSITLYDLRMSSPARKVIMRANEDCNCY--SYDSRKLDEAKCVHMGHESAVMD 276
L T D+S + + S P K I+ A D +Y + K + V+ GH + V
Sbjct: 205 LKTLIDDKSPAVSFAKFS-PNGKFILVATLDSTLKLSNYATGKFLK---VYTGHTNKVFC 260
Query: 277 ID--YSPT-GREFVTGSYDRTIRIFQYNGGR--SREIYHTKRMQRVFCVKFSCDASYVIS 331
I +S T G+ V+GS D + ++ R HT + V C + S S
Sbjct: 261 ITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISS--S 318
Query: 332 GSD-DTNLRLWKAKA 345
G+ D +R+WK A
Sbjct: 319 GNHLDKTIRIWKQDA 333
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 134 (52.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/123 (27%), Positives = 56/123 (45%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
SP K+ + D +D R+ + GHES + I + P G TGS D T R
Sbjct: 193 SPDFKLFISGACDATAKLWDVRE-GTCRQTFSGHESDINAICFFPNGEAICTGSDDATCR 251
Query: 297 IFQYNGGRSREIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPR 355
+F + +Y H + + V FS +++G DD N +W + +E++G+L
Sbjct: 252 LFDLRADQELIVYSHESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSGH 311
Query: 356 EQR 358
+ R
Sbjct: 312 DNR 314
Score = 112 (44.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 27/114 (23%), Positives = 56/114 (49%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + K V +GH M + SP + F++G+ D T +++
Sbjct: 157 IVTSSGDTTCALWDI-ETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVRE 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE 356
G R+ + + + F + + +GSDD RL+ +A ++L +++ E
Sbjct: 216 GTCRQTFSGHESD-INAICFFPNGEAICTGSDDATCRLFDLRADQEL-IVYSHE 267
Score = 96 (38.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 25/81 (30%), Positives = 34/81 (41%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L H +SC + + S D LWDI + + GH G L VS D
Sbjct: 139 LSAHTGYLSCCRFLDD--NSIVTSSGDTTCALWDIETGQQKTVFLGHTGDCMSLAVSPDF 196
Query: 122 RILVSCGTDCTVKLWNVPVAT 142
++ +S D T KLW+V T
Sbjct: 197 KLFISGACDATAKLWDVREGT 217
Score = 81 (33.6 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 29/107 (27%), Positives = 47/107 (43%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDID---YSPTGREFVTGSYDRT 294
P + I ++D C +D R D+ V+ HES + I +S +GR + G D
Sbjct: 236 PNGEAICTGSDDATCRLFDLRA-DQELIVY-SHESIICGITSVAFSRSGRLLLAGYDDFN 293
Query: 295 IRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
I+ I + RV C+ + D V +GS D+ L++W
Sbjct: 294 CNIWDSLKAERVGIL-SGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + STD ++LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWSTDSKLLVSASQDGKLIVWD 83
Score = 43 (20.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 18/77 (23%), Positives = 27/77 (35%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L GH I M + + K S S DG + +WD V V + G
Sbjct: 51 LRGHLAKIYAMHWSTDS-KLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 122 RILVSCGTDCTVKLWNV 138
+ G D ++N+
Sbjct: 110 NFVACGGLDNMCSIYNL 126
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 41/170 (24%), Positives = 72/170 (42%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDI-ANRRTVCQYSGHQGAVRGLTVSTDGR 122
GH G++ + P Y S MD +++WD +RR + Y GH AVR + S DGR
Sbjct: 302 GHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRCIQTYMGHSQAVRDICFSNDGR 361
Query: 123 ILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAG 182
+SCG D +LW+ + P + F D + E L +
Sbjct: 362 RFLSCGYDRQTRLWDTETGKILSSFTNGKI---PYCI-----KFNPDDDKQEQFLCGGSD 413
Query: 183 AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD 232
++ W+ +Q + + V ++ F + T++ D+S+ ++D
Sbjct: 414 KKIIQWDIKSNQIVQEYDQHLGAVNTITFLD-DNRRFVTSSDDKSLRVWD 462
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 141 (54.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 33/115 (28%), Positives = 53/115 (46%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GHR G+ +A +P L FSG D +R+WD+ R + + GH+G + L
Sbjct: 289 GHRQGVYSVALHPT-LDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQ 347
Query: 124 LVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSF--WAVDH--QWE 174
++S D TVKLW++ T + ++ + SF A D+ QW+
Sbjct: 348 VISGSMDTTVKLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAADNIKQWK 402
Score = 122 (48.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 42/180 (23%), Positives = 79/180 (43%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
+ GH + +A + + + F +GS D I++WD+A+ +GH A+RGL VS+
Sbjct: 203 ISGHTGWVRAIAVDKSN-EWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRH 261
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
L S G D V W++ + Y + ++V D+ +
Sbjct: 262 PYLFSVGEDNKVLCWDLE------------SNKQVRNYYGHRQGVYSVALHPTLDVLFSG 309
Query: 182 GAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPA 239
G V +W+ I + T++S++ A+P V++ + D ++ L+DL + A
Sbjct: 310 GRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSM-DTTVKLWDLATGTSA 368
Score = 52 (23.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 271 ESAVMDIDYSPTGREFVTGSYDRTIRIFQ 299
E+ + D+ + TG +T D+TI+ ++
Sbjct: 465 EAGIFDMAFDKTGSRLITCEADKTIKFYK 493
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 126 (49.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 36/126 (28%), Positives = 60/126 (47%)
Query: 17 RSQDLQRVYHNYDPN---LRPQEKAVEYVRALTAAKLEKIFARPFIGALDGHRDGISCMA 73
+++ +R H D N + P +K + AKL + +G GHR G+ +
Sbjct: 475 KARSTERA-HEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQ 533
Query: 74 KNP-NYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCT 132
+P + + G S S DG +R+W I + + + GH +V + + G LVS G+D
Sbjct: 534 FSPVDQILG--SASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGL 591
Query: 133 VKLWNV 138
VKLW +
Sbjct: 592 VKLWTI 597
Score = 114 (45.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 23/56 (41%), Positives = 29/56 (51%)
Query: 83 FSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
FS S D IR+WD+ + R VC H V L S DG LVS G D +W++
Sbjct: 166 FSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDL 221
Score = 104 (41.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 30/88 (34%), Positives = 46/88 (52%)
Query: 62 LDGHRDGISCMAKNPNYLKG--FFSGSMDGDIRLW--DIANRRTVC--QYSGHQGAVRGL 115
L GH D I + + KG F + + D +R+W D+++ R C Q +GH AV +
Sbjct: 382 LHGHTDTILSIDV---FRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSI 438
Query: 116 TVST-DGRILVSCGTDCTVKLWNVPVAT 142
S + +VS DCTVK+W++P T
Sbjct: 439 ACSRMKQQFVVSGSQDCTVKVWDLPETT 466
Score = 87 (35.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 24/111 (21%), Positives = 53/111 (47%)
Query: 261 DEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYN--GGR----SREIYHTKRM 314
+ + +H GH ++ ID G F T + D+++R+++ + GR ++ H+ +
Sbjct: 377 NSCQILH-GHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAV 435
Query: 315 QRVFCVKFSCDASYVISGSDDTNLRLWKA-KASEQLGVLHPREQRKHAYHE 364
+ C + +V+SGS D +++W + + GV+ + + HE
Sbjct: 436 GSIACSRMK--QQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHE 484
Score = 85 (35.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD-GRI-LVSCGTDCTVKLWNV 138
+G DG I+LWD+ + G G V + D R+ L S +DC +++W++
Sbjct: 123 TGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDL 179
Score = 84 (34.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 40/180 (22%), Positives = 79/180 (43%)
Query: 168 AVDHQWEGDLFATAGAQ--VDIWNHNRSQP-INSFQWGT---DTVISVRFNPAEPNVLAT 221
++D +G +FAT V +W + S ++ GT + V S+ + + + +
Sbjct: 391 SIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVS 450
Query: 222 TASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSP 281
+ D ++ ++DL ++ A V+M +A+ HE V + SP
Sbjct: 451 GSQDCTVKVWDLPETTGAEGVMMM----------------KARSTERAHEKDVNSVCVSP 494
Query: 282 TGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
+ +GS DRT +++ + R + R + V+ V+FS + S S D ++R+W
Sbjct: 495 NDKLLASGSQDRTAKLWALSDLRLLGVCRGHR-RGVWSVQFSPVDQILGSASADGSVRIW 553
Score = 77 (32.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 24/97 (24%), Positives = 42/97 (43%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDA 326
GH V + +SP + + S D ++RI+ + + H + ++ V S
Sbjct: 524 GHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFV--SRGT 581
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYH 363
V SGSD ++LW K +E + L + + A H
Sbjct: 582 QLVSSGSDGL-VKLWTIKTNECVRTLDAHQDKVWALH 617
Score = 75 (31.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 31/95 (32%), Positives = 44/95 (46%)
Query: 269 GHESAVMDIDYSPTGREFV-TGSYDRTIRIF---QYNGG--------RSREIYHTKRMQR 316
GH +AV I S ++FV +GS D T++++ + G RS E H K +
Sbjct: 430 GHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNS 489
Query: 317 VFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
V CV S + + SGS D +LW LGV
Sbjct: 490 V-CV--SPNDKLLASGSQDRTAKLWALSDLRLLGV 521
Score = 74 (31.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/110 (19%), Positives = 50/110 (45%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
SP +++ A+ D + + + K GH+++V+ I + G + V+ D ++
Sbjct: 535 SPVDQILGSASADGSVRIWSIQDFSCLKTFE-GHDASVLKIIFVSRGTQLVSSGSDGLVK 593
Query: 297 IFQYNGGRSREIYHT--KRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
++ ++ E T +V+ + C +++GS D+ + +W K
Sbjct: 594 LWTI---KTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDK 640
Score = 40 (19.1 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 264 KCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRM-QRVFCV 320
+CV H+ V + VTGS D TI ++ ++ I TK++ Q +F
Sbjct: 601 ECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRKTVIIKSTKKVDQSLF-- 658
Query: 321 KFS 323
KF+
Sbjct: 659 KFT 661
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 27/120 (22%), Positives = 64/120 (53%)
Query: 233 LRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVH--MGHESAVMDIDYSPTGREFVTGS 290
+R+ + +++ + DC ++ +E +CV +GH AV D+ ++ +G +F++ +
Sbjct: 293 IRLFPKSGHLLLSCSMDCKIKLWEV--YNERRCVRTFIGHSKAVRDVCFNNSGTQFLSAA 350
Query: 291 YDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDA---SYVISGSDDTNLRLWKAKASE 347
YDR I+++ G+ + +++ +CVKF+ D + +++G D + W ++ E
Sbjct: 351 YDRYIKLWDSETGQCISRFTNRKVP--YCVKFNPDEDKQNLLVAGMSDKKIVQWDIRSGE 408
Score = 113 (44.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIAN-RRTVCQYSGHQGAVRGLTVSTDGR 122
GH G+S + P S SMD I+LW++ N RR V + GH AVR + + G
Sbjct: 285 GHTKGVSAIRLFPKSGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNSGT 344
Query: 123 ILVSCGTDCTVKLWN 137
+S D +KLW+
Sbjct: 345 QFLSAAYDRYIKLWD 359
Score = 89 (36.4 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 71 CMAKNPNYLKG--FFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCG 128
C+ NP+ K +G D I WDI + V +Y H GAV +T + R VS
Sbjct: 377 CVKFNPDEDKQNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTS 436
Query: 129 TDCTVKLW 136
D ++++W
Sbjct: 437 DDKSLRVW 444
Score = 83 (34.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 277 IDYSPTGREFVTGSYDRTIRIF-QYNGGR--SREIYHTKRMQRVFC-VKFSCDASYVISG 332
+ SP G+ S D I IF N R ++I+ + C V FS D SYV+SG
Sbjct: 466 VTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSG 525
Query: 333 SDDTNLRLWKAKASE 347
D L +W K ++
Sbjct: 526 DADGKLNIWDWKTTK 540
Score = 74 (31.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 105 YSGHQGAVRGLTV-STDGRILVSCGTDCTVKLWNV 138
++GH V + + G +L+SC DC +KLW V
Sbjct: 283 WTGHTKGVSAIRLFPKSGHLLLSCSMDCKIKLWEV 317
Score = 64 (27.6 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 177 LFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEP--NVLATTASDRSITLYDLR 234
L A + +W+ Q I+ F V+FNP E N+L SD+ I +D+R
Sbjct: 347 LSAAYDRYIKLWDSETGQCISRFT-NRKVPYCVKFNPDEDKQNLLVAGMSDKKIVQWDIR 405
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 16/75 (21%), Positives = 35/75 (46%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYV 329
H AV I + R FV+ S D+++R+++++ + M + V S + ++
Sbjct: 416 HLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPADFKYIAEPSMHSMPAVTLSPNGKWL 475
Query: 330 ISGSDDTNLRLWKAK 344
S D + ++ A+
Sbjct: 476 ACQSMDNQILIFGAQ 490
Score = 52 (23.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 287 VTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
V G D+ I + G + Y + + V + F + +S SDD +LR+W+
Sbjct: 391 VAGMSDKKIVQWDIRSGEVVQEYD-RHLGAVNTITFVDENRRFVSTSDDKSLRVWE 445
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 133 (51.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 36/125 (28%), Positives = 56/125 (44%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKC--VHMGHESAVMDIDYSPTGREFVTGSYDRT 294
+P ++ + D + +D R E C GHES + I + P G F TGS D T
Sbjct: 193 APDTRLFVSGACDASAKLWDVR---EGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 249
Query: 295 IRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLH 353
R+F + Y H + + V FS +++G DD N +W A +++ GVL
Sbjct: 250 CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA 309
Query: 354 PREQR 358
+ R
Sbjct: 310 GHDNR 314
Score = 106 (42.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 139 LAGHTGYLSCCRFLDDNQI---VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
R+ VS D + KLW+V
Sbjct: 196 TRLFVSGACDASAKLWDV 213
Score = 104 (41.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P R FV+G+ D + +++
Sbjct: 157 IVTSSGDTTCALWDI-ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
G R+ + T + + F + + +GSDD RL+ +A ++L
Sbjct: 216 GMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261
Score = 65 (27.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/106 (21%), Positives = 41/106 (38%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCV-HMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
P ++D C +D R E H + + +S +GR + G D
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 297 IFQ-YNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
++ R+ + RV C+ + D V +GS D+ L++W
Sbjct: 296 VWDALKADRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 40 (19.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 12/55 (21%), Positives = 19/55 (34%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
S S DG + +WD V V + G + G D ++N+
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 133 (51.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 36/125 (28%), Positives = 56/125 (44%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKC--VHMGHESAVMDIDYSPTGREFVTGSYDRT 294
+P ++ + D + +D R E C GHES + I + P G F TGS D T
Sbjct: 193 APDTRLFVSGACDASAKLWDVR---EGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 249
Query: 295 IRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLH 353
R+F + Y H + + V FS +++G DD N +W A +++ GVL
Sbjct: 250 CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA 309
Query: 354 PREQR 358
+ R
Sbjct: 310 GHDNR 314
Score = 106 (42.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 139 LAGHTGYLSCCRFLDDNQI---VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
R+ VS D + KLW+V
Sbjct: 196 TRLFVSGACDASAKLWDV 213
Score = 104 (41.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P R FV+G+ D + +++
Sbjct: 157 IVTSSGDTTCALWDI-ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
G R+ + T + + F + + +GSDD RL+ +A ++L
Sbjct: 216 GMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261
Score = 65 (27.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/106 (21%), Positives = 41/106 (38%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCV-HMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
P ++D C +D R E H + + +S +GR + G D
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 297 IFQ-YNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
++ R+ + RV C+ + D V +GS D+ L++W
Sbjct: 296 VWDALKADRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 40 (19.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 12/55 (21%), Positives = 19/55 (34%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
S S DG + +WD V V + G + G D ++N+
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 133 (51.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 36/125 (28%), Positives = 56/125 (44%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKC--VHMGHESAVMDIDYSPTGREFVTGSYDRT 294
+P ++ + D + +D R E C GHES + I + P G F TGS D T
Sbjct: 193 APDTRLFVSGACDASAKLWDVR---EGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 249
Query: 295 IRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLH 353
R+F + Y H + + V FS +++G DD N +W A +++ GVL
Sbjct: 250 CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA 309
Query: 354 PREQR 358
+ R
Sbjct: 310 GHDNR 314
Score = 106 (42.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 139 LAGHTGYLSCCRFLDDNQI---VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
R+ VS D + KLW+V
Sbjct: 196 TRLFVSGACDASAKLWDV 213
Score = 104 (41.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P R FV+G+ D + +++
Sbjct: 157 IVTSSGDTTCALWDI-ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
G R+ + T + + F + + +GSDD RL+ +A ++L
Sbjct: 216 GMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261
Score = 65 (27.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/106 (21%), Positives = 41/106 (38%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCV-HMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
P ++D C +D R E H + + +S +GR + G D
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 297 IFQ-YNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
++ R+ + RV C+ + D V +GS D+ L++W
Sbjct: 296 VWDALKADRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 40 (19.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 12/55 (21%), Positives = 19/55 (34%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
S S DG + +WD V V + G + G D ++N+
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 133 (51.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 36/125 (28%), Positives = 56/125 (44%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKC--VHMGHESAVMDIDYSPTGREFVTGSYDRT 294
+P ++ + D + +D R E C GHES + I + P G F TGS D T
Sbjct: 193 APDTRLFVSGACDASAKLWDVR---EGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 249
Query: 295 IRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLH 353
R+F + Y H + + V FS +++G DD N +W A +++ GVL
Sbjct: 250 CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA 309
Query: 354 PREQR 358
+ R
Sbjct: 310 GHDNR 314
Score = 106 (42.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 139 LAGHTGYLSCCRFLDDNQI---VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
R+ VS D + KLW+V
Sbjct: 196 TRLFVSGACDASAKLWDV 213
Score = 104 (41.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P R FV+G+ D + +++
Sbjct: 157 IVTSSGDTTCALWDI-ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
G R+ + T + + F + + +GSDD RL+ +A ++L
Sbjct: 216 GMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261
Score = 65 (27.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/106 (21%), Positives = 41/106 (38%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCV-HMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
P ++D C +D R E H + + +S +GR + G D
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 297 IFQ-YNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
++ R+ + RV C+ + D V +GS D+ L++W
Sbjct: 296 VWDALKADRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 40 (19.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 12/55 (21%), Positives = 19/55 (34%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
S S DG + +WD V V + G + G D ++N+
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 133 (51.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 36/125 (28%), Positives = 56/125 (44%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKC--VHMGHESAVMDIDYSPTGREFVTGSYDRT 294
+P ++ + D + +D R E C GHES + I + P G F TGS D T
Sbjct: 193 APDTRLFVSGACDASAKLWDVR---EGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 249
Query: 295 IRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLH 353
R+F + Y H + + V FS +++G DD N +W A +++ GVL
Sbjct: 250 CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA 309
Query: 354 PREQR 358
+ R
Sbjct: 310 GHDNR 314
Score = 106 (42.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 139 LAGHTGYLSCCRFLDDNQI---VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
R+ VS D + KLW+V
Sbjct: 196 TRLFVSGACDASAKLWDV 213
Score = 104 (41.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P R FV+G+ D + +++
Sbjct: 157 IVTSSGDTTCALWDI-ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
G R+ + T + + F + + +GSDD RL+ +A ++L
Sbjct: 216 GMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261
Score = 65 (27.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/106 (21%), Positives = 41/106 (38%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCV-HMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
P ++D C +D R E H + + +S +GR + G D
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 297 IFQ-YNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
++ R+ + RV C+ + D V +GS D+ L++W
Sbjct: 296 VWDALKADRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 40 (19.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 12/55 (21%), Positives = 19/55 (34%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
S S DG + +WD V V + G + G D ++N+
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 157 (60.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 69/306 (22%), Positives = 128/306 (41%)
Query: 70 SCMAKNPNYLKGFFSGSMDGDIRLWDIANR---RTVCQYSGHQGAVRGLTVSTDGRILVS 126
+C+A +P G+ D +RL+D+++ R V + GH A+ +T S G ++ S
Sbjct: 1787 NCLAFSPTQPL-LAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIAS 1845
Query: 127 CGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGA-QV 185
D +K+WNV T +P+ SF + E +L + +
Sbjct: 1846 TSEDLLIKVWNVQ--THKAEYTIEKAHNDPINCI----SFNPTN---ECELISCSDDYST 1896
Query: 186 DIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYD-------LRMS-- 236
+W+ + S + T+T+ ++P + +AT + D SI +Y R+
Sbjct: 1897 KVWSRFTTSTTLSTEGSTNTIKHCVYSP-DGKYIATVSRDCSIAVYLCSSKKLLFRLKGH 1955
Query: 237 ---------SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV 287
SP K ++ D N ++ + E C+ GH S++ ++ + +
Sbjct: 1956 TDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLK-GHSSSIEKAFFTKDQKYII 2014
Query: 288 TGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDAS-YVISGSDDTNLRLWKAKAS 346
+ S+D +++++ G EI + R+ V S DAS + S SDD ++ W A
Sbjct: 2015 SASFDGSVKVWDAQFGS--EITSLRHQTRISDVVSSSDASGRIFSSSDDGIIKSWYPVAG 2072
Query: 347 EQLGVL 352
L L
Sbjct: 2073 SCLATL 2078
Score = 108 (43.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
S S DG ++LW+ N T S H+G++ S DG+ + +CG DC + +W+
Sbjct: 2122 SSSDDGTVKLWEF-NSATATT-SAHKGSINQCVFSKDGKYVATCGQDCVLNIWD 2173
Score = 103 (41.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 30/134 (22%), Positives = 57/134 (42%)
Query: 4 KVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIGALD 63
KV SR T T + H P K + V + + ++ + L
Sbjct: 1897 KVWSRFTTSTTLSTEGSTNTIKHCV---YSPDGKYIATVSRDCSIAVYLCSSKKLLFRLK 1953
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH D ++ +P+ K SG D ++R+W+I ++ + GH ++ + D +
Sbjct: 1954 GHTDWVNFCTFSPDSKK-LVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKY 2012
Query: 124 LVSCGTDCTVKLWN 137
++S D +VK+W+
Sbjct: 2013 IISASFDGSVKVWD 2026
Score = 98 (39.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 22/87 (25%), Positives = 43/87 (49%)
Query: 260 LDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFC 319
L++ H S V + +SP + G++D T+ + G+ R I T ++ +
Sbjct: 2308 LNDKPVTHQTSSSYVTSLSFSPNDKYLAIGTFDGTVELLDIASGKLRRIL-TTQVSSITS 2366
Query: 320 VKFSCDASYVISGSDDTNLRLWKAKAS 346
+KF D++ ++S S+D +L +W S
Sbjct: 2367 LKF-LDSTRLVSVSNDRSLIVWNFSTS 2392
Score = 84 (34.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 65 HRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRIL 124
H D I+C++ NP S S D ++W T G ++ S DG+ +
Sbjct: 1870 HNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYI 1929
Query: 125 VSCGTDCTVKLW 136
+ DC++ ++
Sbjct: 1930 ATVSRDCSIAVY 1941
Score = 75 (31.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 280 SPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLR 339
+P + S D T++++++N + H + + CV FS D YV + D L
Sbjct: 2114 APVTLSIASSSDDGTVKLWEFNSATATTSAHKGSINQ--CV-FSKDGKYVATCGQDCVLN 2170
Query: 340 LWKAK 344
+W AK
Sbjct: 2171 IWDAK 2175
>SGD|S000003648 [details] [associations]
symbol:MDV1 "Peripheral protein of cytosolic face of
mitochondrial outer membrane" species:4932 "Saccharomyces
cerevisiae" [GO:0005741 "mitochondrial outer membrane"
evidence=IEA;IDA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IGI;IMP]
[GO:0000266 "mitochondrial fission" evidence=IGI;IMP;IPI]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016559 "peroxisome fission"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003648 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741 EMBL:BK006943
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000002
GO:GO:0016559 GO:GO:0043130 GeneTree:ENSGT00550000075528
HOGENOM:HOG000048466 OrthoDB:EOG469V30 GO:GO:0000266 PDB:2PQN
PDB:3UUX PDBsum:2PQN PDBsum:3UUX EMBL:Z49387 PIR:S56893
RefSeq:NP_012423.1 PDB:2XU6 PDBsum:2XU6 ProteinModelPortal:P47025
SMR:P47025 DIP:DIP-1907N IntAct:P47025 MINT:MINT-389558
STRING:P47025 PaxDb:P47025 EnsemblFungi:YJL112W GeneID:853332
KEGG:sce:YJL112W CYGD:YJL112w OMA:YSSPYKK EvolutionaryTrace:P47025
NextBio:973700 Genevestigator:P47025 GermOnline:YJL112W
InterPro:IPR021061 Pfam:PF11542 Uniprot:P47025
Length = 714
Score = 111 (44.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 21/84 (25%), Positives = 47/84 (55%)
Query: 59 IGAL-DGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
IG++ H D ++C+ + + +G +D +++WD++ + + + +GH + + +
Sbjct: 390 IGSIMSTHDDFLTCLDFDAPFGTLCTAGYLDHTVKIWDLSKQNKIGELAGHLATINCMQI 449
Query: 118 STDGRILVSCGTDCTVKLWNVPVA 141
+ D LV+ G D +KLWN+ +A
Sbjct: 450 NRDYGTLVTGGRDAALKLWNLNLA 473
Score = 87 (35.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 29/116 (25%), Positives = 55/116 (47%)
Query: 180 TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRM---- 235
T V +W+ + I + + TD + S++F+ A L T + DR++ ++DLR
Sbjct: 583 TKDGVVRLWDLRSGKVIRTLKGHTDAITSLKFDSA---CLVTGSYDRTVRIWDLRTGLLN 639
Query: 236 -----SSPARKV-IMRAN------EDCNCYSYDSRKLDEAKCVHMGHESAVMDIDY 279
S+P + + + N ++ + YDS K + CV G+E++V + Y
Sbjct: 640 KFHAYSAPVLSLDLFQENAAVVVADEPSVQIYDSEKDESWSCVEQGNETSVSTVKY 695
Score = 87 (35.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 42/181 (23%), Positives = 82/181 (45%)
Query: 189 NHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANE 248
NH S +++F+ TD V ++ +P+ L + + DR+I +DLR + + +
Sbjct: 488 NHIDSPCVHTFEAHTDEVTALSL---DPSFLVSGSQDRTIRQWDLRSGKCLQTIDLSF-- 542
Query: 249 DCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT-GREFVTGSYDRTIRIFQYNGGRS-R 306
N + S +D +K + + I + TG+ D +R++ G+ R
Sbjct: 543 -ANVLT-TSTNVDLSKSTLLTQRNERPSIGALQSFDAALATGTKDGVVRLWDLRSGKVIR 600
Query: 307 EIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHEA 365
+ HT + +KF D++ +++GS D +R+W + G+L+ + HAY
Sbjct: 601 TLKGHT---DAITSLKF--DSACLVTGSYDRTVRIWDLRT----GLLN----KFHAYSAP 647
Query: 366 V 366
V
Sbjct: 648 V 648
Score = 75 (31.5 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASY 328
GH A+ + + VTGSYDRT+RI+ G + +H + F +A+
Sbjct: 604 GHTDAITSLKFDSAC--LVTGSYDRTVRIWDLRTGLLNK-FHAYSAPVLSLDLFQENAAV 660
Query: 329 VISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHEAVKNRYKHLPE 375
V++ D+ +++++ ++ E + EQ VK + ++ E
Sbjct: 661 VVA--DEPSVQIYDSEKDESWSCV---EQGNETSVSTVKYKENYMVE 702
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 135 (52.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 43/170 (25%), Positives = 73/170 (42%)
Query: 64 GHRDGISCM--AKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
GH D +SC+ + NP+ L F S D +++WD+ + GH G V +T+S DG
Sbjct: 146 GHSDWVSCVRFSPNPDNLT-FVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDG 204
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
+ S G D T+ LW++ +T A+ N +W L A
Sbjct: 205 SLCASGGRDGTLMLWDLNESTHLYSLEAKANIN---ALVFSPNRYW---------LCAAT 252
Query: 182 GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLY 231
G+ + I++ + ++ T + V +EP ++ T S TL+
Sbjct: 253 GSSIRIFDLETQEKVDEL---TVDFVGVGKKSSEPECISLTWSPDGQTLF 299
Score = 117 (46.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 62 LDGHRDGIS-C-MAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
L GH +S C ++ + +Y S S D IRLWD+ Q+ GH V +++S
Sbjct: 59 LTGHSHFVSDCALSFDSHYA---LSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISP 115
Query: 120 DGRILVSCGTDCTVKLWNV 138
D R +VS D T+K+WN+
Sbjct: 116 DNRQVVSGSRDKTIKIWNI 134
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 260 LDEAKCVH--MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRV 317
L++ +C H +GH S V+ + SP R+ V+GS D+TI+I+ G I V
Sbjct: 92 LEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWV 151
Query: 318 FCVKFSCDASYV--ISGSDDTNLRLW 341
CV+FS + + +S D +++W
Sbjct: 152 SCVRFSPNPDNLTFVSAGWDKAVKVW 177
Score = 70 (29.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 267 HMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDA 326
H GH V + SP G +G D T+ ++ N S +Y + + + FS +
Sbjct: 188 HYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLN--ESTHLYSLEAKANINALVFSPNR 245
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVL 352
Y + + +++R++ + E++ L
Sbjct: 246 -YWLCAATGSSIRIFDLETQEKVDEL 270
Score = 47 (21.6 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 259 KLDEAKC--VHMGHESA---VMDIDYSPTGREFVTGSYDRTIRIFQ 299
K+DE V +G +S+ + + +SP G+ +G D IR++Q
Sbjct: 266 KVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVWQ 311
Score = 38 (18.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 312 KRMQRVFCVK--FSCDASYVISGSDDTNLRLWK 342
K+ C+ +S D + SG D +R+W+
Sbjct: 279 KKSSEPECISLTWSPDGQTLFSGWTDNLIRVWQ 311
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 135 (52.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 40/141 (28%), Positives = 63/141 (44%)
Query: 221 TTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKC--VHMGHESAVMDID 278
TT + + + L ++ AR + A D + +D R E C GHES + I
Sbjct: 178 TTFTGHTGDVMSLSLAPDARCFVSGAC-DASAKLWDVR---EGMCRQTFTGHESDINAIC 233
Query: 279 YSPTGREFVTGSYDRTIRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDASYVISGSDDTN 337
+ P G F TGS D T R+F + +Y H + + V FS +++G DD N
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFN 293
Query: 338 LRLWKAKASEQLGVLHPREQR 358
+W +++ GVL + R
Sbjct: 294 CNVWDTLKADRAGVLAGHDNR 314
Score = 54 (24.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 40 (19.1 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 12/55 (21%), Positives = 19/55 (34%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
S S DG + +WD V V + G + G D ++N+
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126
>ZFIN|ZDB-GENE-040426-2044 [details] [associations]
symbol:cdc20 "cell division cycle 20 homolog"
species:7955 "Danio rerio" [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2044 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HSSP:P16649 KO:K03363 CTD:991 HOVERGEN:HBG001024
EMBL:BC054907 IPI:IPI00611755 RefSeq:NP_998245.1 UniGene:Dr.105018
ProteinModelPortal:Q7SYD7 STRING:Q7SYD7 GeneID:406353
KEGG:dre:406353 InParanoid:Q7SYD7 NextBio:20817971
ArrayExpress:Q7SYD7 Uniprot:Q7SYD7
Length = 496
Score = 118 (46.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 47/159 (29%), Positives = 68/159 (42%)
Query: 61 ALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDI--ANRRTVCQYSGHQGAVRGLTVS 118
++DGH + C++ N + L SGS G I D+ A+ + + GH V GLT S
Sbjct: 264 SMDGHSARVGCLSWNDHILS---SGSRSGLIHQHDVRVADHH-IFTFGGHTQEVCGLTWS 319
Query: 119 TDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLF 178
DGR L S G D + +W P+ T AV K W W+ ++
Sbjct: 320 PDGRYLASGGNDNMMYIW--PMTTGSENQAIHALSEHQGAV---KALAWC---PWQPNIP 371
Query: 179 ATAGAQVD----IWNHNRSQPINSFQWGTDTVISVRFNP 213
A+ G D IWN + I+S + V S+ F P
Sbjct: 372 ASGGGTSDRHIRIWNASSGSCISSLDTCSQ-VSSLVFAP 409
Score = 75 (31.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 22/99 (22%), Positives = 47/99 (47%)
Query: 272 SAVMDIDYSPTGREFVTG---SYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASY 328
S V + ++P +E V+G ++D+ + I++Y ++ H R+ + S D S
Sbjct: 400 SQVSSLVFAPNYKELVSGHGFAHDKVV-IWKYPSF-AKVTEHEGHEARILNLALSPDGST 457
Query: 329 VISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHEAVK 367
+ S + D +RLWK E+ P++ ++++
Sbjct: 458 LASIAADETIRLWKCFEKEKDAAKKPKQASGRIIQQSIR 496
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 113 (44.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 31/80 (38%), Positives = 40/80 (50%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGD--IRLWDIANRRTVCQ---YSGHQGAVRGLT 116
L+GH D + +A NP+ G S GD IRLW + VC+ GHQ VRG++
Sbjct: 9 LEGHEDRVWNVAWNPS---GTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVS 65
Query: 117 VSTDGRILVSCGTDCTVKLW 136
S GR L S D T +W
Sbjct: 66 WSNCGRYLASSSFDGTTCIW 85
Score = 74 (31.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 258 RKLDEA--KCVHM-GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREI--YHTK 312
R+ D+ C + GHE+ V +SP+GR T S D+T+ I++ E T
Sbjct: 86 RRQDDTFESCATLEGHENEVKACGWSPSGRFLATCSRDKTVWIWEVGEDEEFECASVQTC 145
Query: 313 RMQRVFCVKFSCDASYVISGSDDTNLRLW 341
Q V V + D + S S D +R +
Sbjct: 146 HSQDVKKVLWHPDRDELASASYDNTIRFF 174
Score = 65 (27.9 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 22/77 (28%), Positives = 32/77 (41%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGR-SREIYHT---KRMQRVFCVKFSCD 325
H V D+ + T T D +R+F +GG S + T Q V V +S
Sbjct: 237 HPRPVYDVSWCRTRGFLATACGDNAVRVFVKDGGDCSWRLGCTLTQAHSQDVNSVSWSPS 296
Query: 326 ASYVISGSDDTNLRLWK 342
+ S DD +RLW+
Sbjct: 297 GGLLASAGDDGYVRLWQ 313
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 205 TVISVRFNPAEPNVLATTASDRSITLY 231
TV + F P LA+ A+D S+ ++
Sbjct: 193 TVWGLSFGPGPEPQLASCAADGSVYVW 219
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 132 (51.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 35/125 (28%), Positives = 56/125 (44%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKC--VHMGHESAVMDIDYSPTGREFVTGSYDRT 294
+P ++ + D + +D R E C GHES + I + P G F TGS D T
Sbjct: 193 APDTRLFVSGACDASAKLWDIR---EGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 249
Query: 295 IRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLH 353
R+F + +Y H + + V FS +++G DD N +W +++ GVL
Sbjct: 250 CRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLA 309
Query: 354 PREQR 358
+ R
Sbjct: 310 GHDNR 314
Score = 105 (42.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L+++ D
Sbjct: 139 LAGHTGYLSCCRFLDDNQI---VTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
R+ VS D + KLW++
Sbjct: 196 TRLFVSGACDASAKLWDI 213
Score = 105 (42.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 27/109 (24%), Positives = 52/109 (47%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
I+ ++ D C +D + + GH VM + +P R FV+G+ D + +++
Sbjct: 157 IVTSSGDTTCALWDI-ETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIRE 215
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGV 351
G R+ + T + + F + + +GSDD RL+ +A ++L V
Sbjct: 216 GMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMV 263
Score = 67 (28.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/108 (23%), Positives = 46/108 (42%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDID---YSPTGREFVTGSYDRT 294
P ++D C +D R D+ V+ H++ + I +S +GR + G D
Sbjct: 236 PNGNAFATGSDDATCRLFDLRA-DQELMVY-SHDNIICGITSVAFSKSGRLLLAGYDDFN 293
Query: 295 IRIFQ-YNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
++ R+ + RV C+ + D V +GS D+ L++W
Sbjct: 294 CNVWDTLKADRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + TD R+LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 84 SGSMDGDIRLWD 95
S S DG + +WD
Sbjct: 72 SASQDGKLIIWD 83
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 55 ARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRG 114
A + L GH+ I + +P Y + SGS D +I+LWDI + V +Y GH AVR
Sbjct: 94 AAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 115 LTVSTDGRILVSCGTDCTVKLWNV 138
L S DG+ L S D TVKLW++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDL 176
Score = 128 (50.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 36/139 (25%), Positives = 74/139 (53%)
Query: 215 EPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVH--MGHES 272
+PN + + S + +R+++P ++I+ ++ + +D L+ AK + MGH++
Sbjct: 52 KPNCIMSLTGHTS-PVESVRLNTP-EELIVAGSQSGSIRVWD---LEAAKILRTLMGHKA 106
Query: 273 AVMDIDYSPTGREFV-TGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVI 330
+ +D+ P G EFV +GS D I+++ R ++ + Q V C++FS D ++
Sbjct: 107 NICSLDFHPYG-EFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 331 SGSDDTNLRLWKAKASEQL 349
S +DD ++LW A + +
Sbjct: 164 SAADDHTVKLWDLTAGKMM 182
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 49/177 (27%), Positives = 84/177 (47%)
Query: 184 QVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVI 243
+V++W+ N+ I S T V SVR N E ++A + S SI ++DL + R ++
Sbjct: 44 RVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG-SIRVWDLEAAKILRTLM 102
Query: 244 -MRANE---DCNCY-------SYDSR-KLDEAK---CV--HMGHESAVMDIDYSPTGREF 286
+AN D + Y S D+ KL + + CV + GH AV + +SP G+
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Query: 287 VTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
+ + D T++++ G+ + HT + V+F + + SGS D +R W
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTGPVN---VVEFHPNEYLLASGSSDRTIRFW 216
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 45/176 (25%), Positives = 74/176 (42%)
Query: 59 IGALDGHRDGISCMAKN-PNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
I +L GH + + N P L +GS G IR+WD+ + + GH+ + L
Sbjct: 56 IMSLTGHTSPVESVRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 118 STDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDL 177
G + S D +KLW++ AV + ++ D +W
Sbjct: 114 HPYGEFVASGSQDTNIKLWDI-----RRKGCVFRYRGHSQAVRCLR---FSPDGKWLAS- 164
Query: 178 FATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
A V +W+ + ++ F T V V F+P E +LA+ +SDR+I +DL
Sbjct: 165 -AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWDL 218
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 144 (55.7 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 41/154 (26%), Positives = 72/154 (46%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVAT 142
SG +D DI++WD+ + + GH +V GL++S DG L+S D +V++W++ P A
Sbjct: 200 SGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAP 259
Query: 143 LXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQ 200
+ + S W+ D G A A V IW+ + +
Sbjct: 260 KERCVKIFQGNVHNFEKNLLRCS-WSAD----GSKIAAGSADRFVYIWDTTTRRIVYKLP 314
Query: 201 WGTDTVISVRFNPAEPNVLATTASDRSITLYDLR 234
+V V F+P EP VL+ + SD+ + + +++
Sbjct: 315 GHAGSVNEVAFHPEEPIVLSGS-SDKRLYIGEIQ 347
Score = 105 (42.0 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 27/77 (35%), Positives = 37/77 (48%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDI-ANRRTVCQYSGHQGAVRGLTVSTD 120
L GH + C +PN SG D I +W++ + GH GAV L +TD
Sbjct: 52 LSGHEGEVYCCKFHPNGATLASSG-YDRLILMWNVYGDCENYATLKGHSGAVMELHYNTD 110
Query: 121 GRILVSCGTDCTVKLWN 137
G +L S TD TV +W+
Sbjct: 111 GSLLFSASTDKTVCVWD 127
Score = 84 (34.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 27/109 (24%), Positives = 54/109 (49%)
Query: 238 PARK---VIMRANEDCNCYSYDSRKLDEAKCVHMGHES-AVMDIDYSPTGREFVTGSYDR 293
PAR+ + ++D +D RK +A VH + V+ + ++ T + ++G D
Sbjct: 149 PARRGPQLACTGSDDGTVKLWDIRK--KAS-VHTFQNTYQVLSVTFNDTSDQIISGGIDN 205
Query: 294 TIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLW 341
I+++ +++ IY + V + S D SY++S S D ++R+W
Sbjct: 206 DIKVWDLR--QNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVW 252
Score = 80 (33.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 26/108 (24%), Positives = 51/108 (47%)
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV-TGSYDRTIRIFQY 300
++ A+ D +DS + K + GH S V + G + TGS D T++++
Sbjct: 113 LLFSASTDKTVCVWDSETGERVKRLK-GHTSFVNSCFPARRGPQLACTGSDDGTVKLWDI 171
Query: 301 NGGRSREIYHT-KRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
R + HT + +V V F+ + +ISG D ++++W + ++
Sbjct: 172 ---RKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNK 216
Score = 59 (25.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 19/81 (23%), Positives = 35/81 (43%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSRE----IY----HTKRMQRVFCV 320
GH +V + S G ++ S D ++R++ +E I+ H + C
Sbjct: 223 GHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRC- 281
Query: 321 KFSCDASYVISGSDDTNLRLW 341
+S D S + +GS D + +W
Sbjct: 282 SWSADGSKIAAGSADRFVYIW 302
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 141 (54.7 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
++ +ED +D + ++ GH V D+D SP F T S+DRT R++ +
Sbjct: 369 LLSCSEDSTVRYWDLKSFTNT-VLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFAR 427
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK--ASEQLGVLH 353
+Y + V CVKF +++Y+ +GS D +RLW + AS +L H
Sbjct: 428 TYPLRLY-AGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGH 479
Score = 129 (50.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 29/86 (33%), Positives = 45/86 (52%)
Query: 54 FARPF-IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAV 112
FAR + + GH + C+ +PN +GS D +RLW +V ++GH+G V
Sbjct: 425 FARTYPLRLYAGHLSDVDCVKFHPNS-NYIATGSTDKTVRLWSTRQGASVRLFTGHRGPV 483
Query: 113 RGLTVSTDGRILVSCGTDCTVKLWNV 138
L S +G+ L S G D +KLW++
Sbjct: 484 LTLAFSPNGKYLASAGEDQRLKLWDL 509
Score = 52 (23.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 101 TVCQYS-GH-QGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
TVC Y+ H + + VS D R+L + + VKLW++
Sbjct: 270 TVCFYAFQHTEQLLNTAEVSADSRLLAAGFDNSAVKLWSL 309
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 146 (56.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
++ +ED + +D ++ GH V D+D SP F +GS+DRT R++ ++
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNT-VLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDR 415
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
IY + V CVKF +++Y+ +GS D +RLW A+
Sbjct: 416 TYPLRIY-AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Score = 135 (52.6 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 64 GHRDGISCMAKNPN--YLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
GH + C+ +PN YL +GS D +RLW +V ++GH+G V L+ S +G
Sbjct: 424 GHLADVDCVKFHPNSNYLA---TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNG 480
Query: 122 RILVSCGTDCTVKLWNVPVATL 143
+ L S G D +KLW++ TL
Sbjct: 481 KYLASAGEDQRLKLWDLASGTL 502
Score = 46 (21.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 9/40 (22%), Positives = 23/40 (57%)
Query: 101 TVCQYSGH--QGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
T+C Y+ + + + +S+D ++L + + +KLW++
Sbjct: 258 TICFYAFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSL 297
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 149 (57.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 55 ARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRG 114
A + L GH+ I + +P Y + SGS D +I+LWDI + V +Y GH AVR
Sbjct: 94 AAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 115 LTVSTDGRILVSCGTDCTVKLWNV 138
L S DG+ L S D TVKLW++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDL 176
Score = 128 (50.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 36/139 (25%), Positives = 74/139 (53%)
Query: 215 EPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVH--MGHES 272
+PN + + S + +R+++P ++I+ ++ + +D L+ AK + MGH++
Sbjct: 52 KPNCIMSLTGHTS-PVESVRLNTP-EELIVAGSQSGSIRVWD---LEAAKILRTLMGHKA 106
Query: 273 AVMDIDYSPTGREFV-TGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVI 330
+ +D+ P G EFV +GS D I+++ R ++ + Q V C++FS D ++
Sbjct: 107 NICSLDFHPYG-EFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 331 SGSDDTNLRLWKAKASEQL 349
S +DD ++LW A + +
Sbjct: 164 SAADDHTVKLWDLTAGKMM 182
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 49/177 (27%), Positives = 84/177 (47%)
Query: 184 QVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVI 243
+V++W+ N+ I S T V SVR N E ++A + S SI ++DL + R ++
Sbjct: 44 RVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG-SIRVWDLEAAKILRTLM 102
Query: 244 -MRANE---DCNCY-------SYDSR-KLDEAK---CV--HMGHESAVMDIDYSPTGREF 286
+AN D + Y S D+ KL + + CV + GH AV + +SP G+
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Query: 287 VTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
+ + D T++++ G+ + HT + V+F + + SGS D +R W
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTGPVN---VVEFHPNEYLLASGSSDRTIRFW 216
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 45/176 (25%), Positives = 74/176 (42%)
Query: 59 IGALDGHRDGISCMAKN-PNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
I +L GH + + N P L +GS G IR+WD+ + + GH+ + L
Sbjct: 56 IMSLTGHTSPVESVRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 118 STDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDL 177
G + S D +KLW++ AV + ++ D +W
Sbjct: 114 HPYGEFVASGSQDTNIKLWDI-----RRKGCVFRYRGHSQAVRCLR---FSPDGKWLAS- 164
Query: 178 FATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
A V +W+ + ++ F T V V F+P E +LA+ +SDR+I +DL
Sbjct: 165 -AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWDL 218
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 149 (57.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 55 ARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRG 114
A + L GH+ I + +P Y + SGS D +I+LWDI + V +Y GH AVR
Sbjct: 94 AAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 115 LTVSTDGRILVSCGTDCTVKLWNV 138
L S DG+ L S D TVKLW++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDL 176
Score = 128 (50.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 36/139 (25%), Positives = 74/139 (53%)
Query: 215 EPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVH--MGHES 272
+PN + + S + +R+++P ++I+ ++ + +D L+ AK + MGH++
Sbjct: 52 KPNCIMSLTGHTS-PVESVRLNTP-EELIVAGSQSGSIRVWD---LEAAKILRTLMGHKA 106
Query: 273 AVMDIDYSPTGREFV-TGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVI 330
+ +D+ P G EFV +GS D I+++ R ++ + Q V C++FS D ++
Sbjct: 107 NICSLDFHPYG-EFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 331 SGSDDTNLRLWKAKASEQL 349
S +DD ++LW A + +
Sbjct: 164 SAADDHTVKLWDLTAGKMM 182
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 49/177 (27%), Positives = 84/177 (47%)
Query: 184 QVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVI 243
+V++W+ N+ I S T V SVR N E ++A + S SI ++DL + R ++
Sbjct: 44 RVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG-SIRVWDLEAAKILRTLM 102
Query: 244 -MRANE---DCNCY-------SYDSR-KLDEAK---CV--HMGHESAVMDIDYSPTGREF 286
+AN D + Y S D+ KL + + CV + GH AV + +SP G+
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Query: 287 VTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
+ + D T++++ G+ + HT + V+F + + SGS D +R W
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTGPVN---VVEFHPNEYLLASGSSDRTIRFW 216
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 45/176 (25%), Positives = 74/176 (42%)
Query: 59 IGALDGHRDGISCMAKN-PNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
I +L GH + + N P L +GS G IR+WD+ + + GH+ + L
Sbjct: 56 IMSLTGHTSPVESVRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 118 STDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDL 177
G + S D +KLW++ AV + ++ D +W
Sbjct: 114 HPYGEFVASGSQDTNIKLWDI-----RRKGCVFRYRGHSQAVRCLR---FSPDGKWLAS- 164
Query: 178 FATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
A V +W+ + ++ F T V V F+P E +LA+ +SDR+I +DL
Sbjct: 165 -AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWDL 218
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 149 (57.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 55 ARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRG 114
A + L GH+ I + +P Y + SGS D +I+LWDI + V +Y GH AVR
Sbjct: 94 AAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 115 LTVSTDGRILVSCGTDCTVKLWNV 138
L S DG+ L S D TVKLW++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDL 176
Score = 128 (50.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 36/139 (25%), Positives = 74/139 (53%)
Query: 215 EPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVH--MGHES 272
+PN + + S + +R+++P ++I+ ++ + +D L+ AK + MGH++
Sbjct: 52 KPNCIMSLTGHTS-PVESVRLNTP-EELIVAGSQSGSIRVWD---LEAAKILRTLMGHKA 106
Query: 273 AVMDIDYSPTGREFV-TGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVI 330
+ +D+ P G EFV +GS D I+++ R ++ + Q V C++FS D ++
Sbjct: 107 NICSLDFHPYG-EFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 331 SGSDDTNLRLWKAKASEQL 349
S +DD ++LW A + +
Sbjct: 164 SAADDHTVKLWDLTAGKMM 182
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 49/177 (27%), Positives = 84/177 (47%)
Query: 184 QVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVI 243
+V++W+ N+ I S T V SVR N E ++A + S SI ++DL + R ++
Sbjct: 44 RVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG-SIRVWDLEAAKILRTLM 102
Query: 244 -MRANE---DCNCY-------SYDSR-KLDEAK---CV--HMGHESAVMDIDYSPTGREF 286
+AN D + Y S D+ KL + + CV + GH AV + +SP G+
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Query: 287 VTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
+ + D T++++ G+ + HT + V+F + + SGS D +R W
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTGPVN---VVEFHPNEYLLASGSSDRTIRFW 216
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 45/176 (25%), Positives = 74/176 (42%)
Query: 59 IGALDGHRDGISCMAKN-PNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
I +L GH + + N P L +GS G IR+WD+ + + GH+ + L
Sbjct: 56 IMSLTGHTSPVESVRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 118 STDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDL 177
G + S D +KLW++ AV + ++ D +W
Sbjct: 114 HPYGEFVASGSQDTNIKLWDI-----RRKGCVFRYRGHSQAVRCLR---FSPDGKWLAS- 164
Query: 178 FATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
A V +W+ + ++ F T V V F+P E +LA+ +SDR+I +DL
Sbjct: 165 -AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWDL 218
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 149 (57.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 55 ARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRG 114
A + L GH+ I + +P Y + SGS D +I+LWDI + V +Y GH AVR
Sbjct: 94 AAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 115 LTVSTDGRILVSCGTDCTVKLWNV 138
L S DG+ L S D TVKLW++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDL 176
Score = 128 (50.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 36/139 (25%), Positives = 74/139 (53%)
Query: 215 EPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVH--MGHES 272
+PN + + S + +R+++P ++I+ ++ + +D L+ AK + MGH++
Sbjct: 52 KPNCIMSLTGHTS-PVESVRLNTP-EELIVAGSQSGSIRVWD---LEAAKILRTLMGHKA 106
Query: 273 AVMDIDYSPTGREFV-TGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVI 330
+ +D+ P G EFV +GS D I+++ R ++ + Q V C++FS D ++
Sbjct: 107 NICSLDFHPYG-EFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 331 SGSDDTNLRLWKAKASEQL 349
S +DD ++LW A + +
Sbjct: 164 SAADDHTVKLWDLTAGKMM 182
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 49/177 (27%), Positives = 84/177 (47%)
Query: 184 QVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVI 243
+V++W+ N+ I S T V SVR N E ++A + S SI ++DL + R ++
Sbjct: 44 RVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG-SIRVWDLEAAKILRTLM 102
Query: 244 -MRANE---DCNCY-------SYDSR-KLDEAK---CV--HMGHESAVMDIDYSPTGREF 286
+AN D + Y S D+ KL + + CV + GH AV + +SP G+
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Query: 287 VTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
+ + D T++++ G+ + HT + V+F + + SGS D +R W
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTGPVN---VVEFHPNEYLLASGSSDRTIRFW 216
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 45/176 (25%), Positives = 74/176 (42%)
Query: 59 IGALDGHRDGISCMAKN-PNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
I +L GH + + N P L +GS G IR+WD+ + + GH+ + L
Sbjct: 56 IMSLTGHTSPVESVRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 118 STDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDL 177
G + S D +KLW++ AV + ++ D +W
Sbjct: 114 HPYGEFVASGSQDTNIKLWDI-----RRKGCVFRYRGHSQAVRCLR---FSPDGKWLAS- 164
Query: 178 FATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
A V +W+ + ++ F T V V F+P E +LA+ +SDR+I +DL
Sbjct: 165 -AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWDL 218
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 146 (56.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 58/297 (19%), Positives = 118/297 (39%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
L+GHR+ + +A N Y +GS D +LW + + GH + L +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQS 189
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
++ + D T KLW+V E +++ N+ D G TA
Sbjct: 190 TLVATGSMDTTAKLWDVESGE--EVSTLAGHFAEIISLCF--NT--TGDRLVTGSFDHTA 243
Query: 182 GAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARK 241
+W+ + ++ + V+FN + +++AT + D+S ++D
Sbjct: 244 ----ILWDVPSGRKVHVLSGHRGEISCVQFN-WDCSLIATASLDKSCKVWDAEGGQCLAT 298
Query: 242 VIMRANEDCN-CYSYDSRKL--------------DEAKCVHM--GHESAVMDIDYSPTGR 284
++ +E + C++Y + + D +C+ GH+ + + ++ G
Sbjct: 299 LLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGS 358
Query: 285 EFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
+T S D+T R++ G ++ +F F+ + +I+GS D R+W
Sbjct: 359 RVLTASVDKTSRVWCVKTGACLQVLEG-HSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 84/339 (24%), Positives = 143/339 (42%)
Query: 39 VEYVRALTAAKLEKIFA---RPF--IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRL 93
VE V+ L EK+ R F AL H ++ +A N + F +GS D ++
Sbjct: 60 VEQVKLLICKLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSG-SCFITGSYDRTCKI 118
Query: 94 WDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGT-DCTVKLWNVPVATLXXXXXXXXX 152
WD A+ + GH+ V + + V+ G+ D T KLW+
Sbjct: 119 WDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTA 178
Query: 153 XXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFN 212
LA + +++ A G + TA +W+ + +++ +IS+ FN
Sbjct: 179 EIVCLA-FNPQSTLVAT-----GSMDTTA----KLWDVESGEEVSTLAGHFAEIISLCFN 228
Query: 213 PAEPNVLATTASDRSITLYDL------RMSSPARKVI--MRANEDCNCY---SYD-SRKL 260
L T + D + L+D+ + S R I ++ N DC+ S D S K+
Sbjct: 229 TTGDR-LVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKV 287
Query: 261 DEAK---CVH--MGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSR-EIY-HTKR 313
+A+ C+ +GH V+D+ ++ TG+ T S D T R+F + + ++ H
Sbjct: 288 WDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGE 347
Query: 314 MQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVL 352
+ +V C F+ S V++ S D R+W K L VL
Sbjct: 348 ISKV-C--FNAQGSRVLTASVDKTSRVWCVKTGACLQVL 383
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 149 (57.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 55 ARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRG 114
A + L GH+ I + +P Y + SGS D +I+LWDI + V +Y GH AVR
Sbjct: 94 AAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 115 LTVSTDGRILVSCGTDCTVKLWNV 138
L S DG+ L S D TVKLW++
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDL 176
Score = 128 (50.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 36/139 (25%), Positives = 74/139 (53%)
Query: 215 EPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVH--MGHES 272
+PN + + S + +R+++P ++I+ ++ + +D L+ AK + MGH++
Sbjct: 52 KPNCIMSLTGHTS-PVESVRLNTP-EELIVAGSQSGSIRVWD---LEAAKILRTLMGHKA 106
Query: 273 AVMDIDYSPTGREFV-TGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASYVI 330
+ +D+ P G EFV +GS D I+++ R ++ + Q V C++FS D ++
Sbjct: 107 NICSLDFHPYG-EFVASGSQDTNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 331 SGSDDTNLRLWKAKASEQL 349
S +DD ++LW A + +
Sbjct: 164 SAADDHTVKLWDLTAGKMM 182
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 49/177 (27%), Positives = 84/177 (47%)
Query: 184 QVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVI 243
+V++W+ N+ I S T V SVR N E ++A + S SI ++DL + R ++
Sbjct: 44 RVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG-SIRVWDLEAAKILRTLM 102
Query: 244 -MRANE---DCNCY-------SYDSR-KLDEAK---CV--HMGHESAVMDIDYSPTGREF 286
+AN D + Y S D+ KL + + CV + GH AV + +SP G+
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 162
Query: 287 VTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
+ + D T++++ G+ + HT + V+F + + SGS D +R W
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTGPVN---VVEFHPNEYLLASGSSDRTIRFW 216
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 45/176 (25%), Positives = 74/176 (42%)
Query: 59 IGALDGHRDGISCMAKN-PNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
I +L GH + + N P L +GS G IR+WD+ + + GH+ + L
Sbjct: 56 IMSLTGHTSPVESVRLNTPEEL--IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF 113
Query: 118 STDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDL 177
G + S D +KLW++ AV + ++ D +W
Sbjct: 114 HPYGEFVASGSQDTNIKLWDI-----RRKGCVFRYRGHSQAVRCLR---FSPDGKWLAS- 164
Query: 178 FATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
A V +W+ + ++ F T V V F+P E +LA+ +SDR+I +DL
Sbjct: 165 -AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWDL 218
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 107 (42.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 63 DGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
D H + ++C N ++ +GS D ++LWD+ + GH +V S D
Sbjct: 696 DEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD 755
Query: 122 RILVSCGTDCTVKLWNVPVA 141
++L SC D T+KLW+ A
Sbjct: 756 KLLASCSADGTLKLWDATSA 775
Score = 95 (38.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCD 325
+H GH S + D+SP V + ++ + RS+ + V V FS D
Sbjct: 835 IHTGHHSTIQYCDFSPQNHLAVVALSQYCVELWNTDS-RSKVADCRGHLSWVHGVMFSPD 893
Query: 326 ASYVISGSDDTNLRLWKAK 344
S ++ SDD +RLW+ K
Sbjct: 894 GSSFLTSSDDQTIRLWETK 912
Score = 90 (36.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQR-VFCVKFSCDASY 328
H+ V+ D S +F + S D+T +I+ ++ ++ + V C FS D++
Sbjct: 1084 HQGTVLSCDISHDATKFSSTSADKTAKIWSFD--LLLPLHELRGHNGCVRCSAFSVDSTL 1141
Query: 329 VISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYH 363
+ +G D+ +R+W E L + P + A H
Sbjct: 1142 LATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATH 1176
Score = 79 (32.9 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 91 IRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLW 136
+ LW+ +R V GH V G+ S DG ++ D T++LW
Sbjct: 864 VELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLW 909
Score = 78 (32.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 38/160 (23%), Positives = 66/160 (41%)
Query: 108 HQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFW 167
H AV S DG+ + SCG D T++++ T E L +F
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAE--TGEKLLEIKAHEDEVLCC-----AF- 665
Query: 168 AVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRF-NPAEPNVLATTASDR 226
+ D ++ + +V IWN + ++++ ++ V F N + +LAT +SD
Sbjct: 666 STDDRFIAT--CSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDC 723
Query: 227 SITLYDLRMSSPARKVIMRANEDCNC-YSYDSRKLDEAKC 265
+ L+DL + N +C +S D + L A C
Sbjct: 724 FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLL--ASC 761
Score = 76 (31.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 237 SPARKV-IMRANEDC-NCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
SP + ++ ++ C ++ DSR A C GH S V + +SP G F+T S D+T
Sbjct: 849 SPQNHLAVVALSQYCVELWNTDSRS-KVADC--RGHLSWVHGVMFSPDGSSFLTSSDDQT 905
Query: 295 IRIFQ 299
IR+++
Sbjct: 906 IRLWE 910
Score = 69 (29.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 35/172 (20%), Positives = 72/172 (41%)
Query: 185 VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIM 244
V++WN + + + V V F+P + L T++ D++I L++ + V++
Sbjct: 864 VELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFL-TSSDDQTIRLWETKKVCKNSAVML 922
Query: 245 RANEDCNCYSYDSRKL--DEAKCVHMGHESAVMDIDY-----------SPTGREFVTGSY 291
+ D + L D + + + + IDY SP + G
Sbjct: 923 KQEVDVVFQENEVMVLAVDHIRRLQLIN-GRTGQIDYLTEAQVSCCCLSPHLQYIAFGDE 981
Query: 292 DRTIRIFQYNGGRSREIYHTKRMQR--VFCVKFSCDASYVISGSDDTNLRLW 341
+ I I + R I+ ++ + V+ ++F+ D +IS SDD +++W
Sbjct: 982 NGAIEILELVNNR---IFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVW 1030
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 143 (55.4 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 54/221 (24%), Positives = 94/221 (42%)
Query: 17 RSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPF--IGALDGHRDGISCMAK 74
+ Q Q+ ++ P + Q+ + + L +L+ + RP+ + + GH + +A
Sbjct: 151 QEQRQQQKQNDRGPPVIGQQLTLARAQELNM-QLKPEWHRPWKLMRVISGHLGWVRALAV 209
Query: 75 NPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVK 134
P+ K F SG+ D I++WD+A+ R +GH VRGL VS L SC D VK
Sbjct: 210 EPDN-KWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHPYLFSCAEDKMVK 268
Query: 135 LWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNR 192
W++ + LA++ D+ T G +W+
Sbjct: 269 CWDLETNKVIRHYHGHLSGVYTLALHPTL------------DVLVTGGRDGVARVWDMRT 316
Query: 193 SQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
I+ T TV + A+P V+ T + D ++ ++DL
Sbjct: 317 RSNIHVLSGHTGTVSELVCQEADPQVI-TGSLDSTVRMWDL 356
Score = 47 (21.6 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 271 ESAVMDIDYSPTGREFVTGSYDRTIRIFQ 299
ES + + +G + G D+TI+I++
Sbjct: 459 ESGIFTSTFDQSGSRLICGEADKTIKIWK 487
Score = 47 (21.6 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 317 VFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHP 354
+F F S +I G D +++WK + E HP
Sbjct: 462 IFTSTFDQSGSRLICGEADKTIKIWK-EDMEATPETHP 498
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 110 (43.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 62 LDGHRDGISCM-AKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L H+D I+ + ++L S S DG I+LWD+ + + + H G GL V D
Sbjct: 159 LRSHKDSITGFWCQGEDWL---ISTSKDGMIKLWDLKTHQCIETHIAHTGECWGLAVKDD 215
Query: 121 GRILVSCGTDCTVKLWNVPV 140
+L++ GTD VK+W + +
Sbjct: 216 --LLITTGTDSQVKIWKLDI 233
Score = 89 (36.4 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 28/128 (21%), Positives = 61/128 (47%)
Query: 241 KVIMRANEDCNCYSYDSRKLDEAKCVH---MGHESAVMDIDYSPTGREFVTGSYDRTIRI 297
K+I+ ++ D N + LD C H H+ ++M++ + P F + S D ++
Sbjct: 586 KMIITSSADKNIKIWG---LDFGDC-HKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKY 641
Query: 298 FQYNGGRSREIYHTKRMQ-RVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPRE 356
++G + I Q V+ + + D +V+S S D ++R+W+ + +Q+ + +E
Sbjct: 642 --WDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWE-ETEDQVFLEEEKE 698
Query: 357 QRKHAYHE 364
+ +E
Sbjct: 699 KELEEQYE 706
Score = 87 (35.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 85 GSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
G DG I++WD+ ++ + ++GH+ A+ L G L+S D + +W++
Sbjct: 97 GYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDL 150
Score = 86 (35.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 85 GSMDGDIRLWDIANRRTVCQYS-GHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPV 140
G+ +G+++L+D+A+ + H A+ L +++DG+ LV+ D TVK W+ V
Sbjct: 448 GTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFKV 504
Score = 74 (31.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/83 (25%), Positives = 44/83 (53%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYN-------GGRSR-----EIYHTKRMQR- 316
H++A+ +D + G+ VTGS D+T++ + + G +++ +++H ++
Sbjct: 472 HDAAIWSLDLTSDGKRLVTGSADKTVKFWDFKVENSLVPGTKNKFLPVLKLHHDTTLELT 531
Query: 317 --VFCVKFSCDASYV-ISGSDDT 336
+ CV+ S D Y+ IS D+T
Sbjct: 532 DDILCVRVSPDDRYLAISLLDNT 554
Score = 71 (30.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 21/88 (23%), Positives = 39/88 (44%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASY 328
GH+ V+ ID S + +T S D+ I+I+ + G + + + VKF +
Sbjct: 571 GHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQ-DSIMNVKFLPQSHN 629
Query: 329 VISGSDDTNLRLWKAKASEQLGVLHPRE 356
S S D ++ W + E + L+ +
Sbjct: 630 FFSCSKDAVVKYWDGEKFECIQKLYAHQ 657
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 14/68 (20%), Positives = 32/68 (47%)
Query: 274 VMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGS 333
++ + SP R D T+++F + + + ++ V + S D+ +I+ S
Sbjct: 534 ILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKLP-VLSIDISFDSKMIITSS 592
Query: 334 DDTNLRLW 341
D N+++W
Sbjct: 593 ADKNIKIW 600
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 38/154 (24%), Positives = 72/154 (46%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVAT 142
SG +D DI++WD+ + GH +V GL++S++G L+S D TV++W+V P A
Sbjct: 210 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAP 269
Query: 143 LXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQ 200
+ + S W+ D G A A V +W+ + +
Sbjct: 270 KERCVKIFQGNVHNFEKNLLRCS-WSPD----GSKIAAGSADRFVYVWDTTSRRILYKLP 324
Query: 201 WGTDTVISVRFNPAEPNVLATTASDRSITLYDLR 234
++ V F+P EP ++ + +SD+ + + +++
Sbjct: 325 GHAGSINEVAFHPDEP-IIISASSDKRLYMGEIQ 357
Score = 107 (42.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 27/77 (35%), Positives = 36/77 (46%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDI-ANRRTVCQYSGHQGAVRGLTVSTD 120
L GH + C +PN S D I LW++ + GH GAV L +TD
Sbjct: 62 LSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 120
Query: 121 GRILVSCGTDCTVKLWN 137
G +L S TD TV +W+
Sbjct: 121 GSMLFSASTDKTVAVWD 137
Score = 81 (33.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 24/112 (21%), Positives = 53/112 (47%)
Query: 238 PARK---VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
PAR+ ++ ++D +D RK +A + V+ + ++ T + ++G D
Sbjct: 159 PARRGPQLVCTGSDDGTVKLWDIRK--KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDND 216
Query: 295 IRIFQYNGGRSREIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
I+++ R ++ +T R V + S + SY++S + D +R+W +
Sbjct: 217 IKVWDL---RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
Score = 79 (32.9 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV-TGSYDRTIRIFQY 300
++ A+ D +DS + K + GH S V + G + V TGS D T++++
Sbjct: 123 MLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 181
Query: 301 NGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
+ I + +V V F+ + +ISG D ++++W + ++
Sbjct: 182 R--KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 226
Score = 59 (25.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 24/105 (22%), Positives = 43/105 (40%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSRE----IY----HTKRMQRVFCV 320
GH +V + S G ++ + D T+R++ +E I+ H + C
Sbjct: 233 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC- 291
Query: 321 KFSCDASYVISGSDDTNLRLWKAKASEQLGVL--HPREQRKHAYH 363
+S D S + +GS D + +W + L L H + A+H
Sbjct: 292 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFH 336
Score = 55 (24.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 30/130 (23%), Positives = 53/130 (40%)
Query: 217 NVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKL-DEAKCVHM--GH--- 270
N L T + ++ L +SS ++ A ++ +D R + +CV + G+
Sbjct: 225 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGNVHN 283
Query: 271 -ESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASY 328
E ++ +SP G + GS DR + ++ R +Y + V F D
Sbjct: 284 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI--LYKLPGHAGSINEVAFHPDEPI 341
Query: 329 VISGSDDTNL 338
+IS S D L
Sbjct: 342 IISASSDKRL 351
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 133 (51.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 63 DGHRDGISCMAKNPNYLKGFF-SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
DGH D +SC+ +PN+ S D +++W++AN + + GH G + +TVS DG
Sbjct: 146 DGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDG 205
Query: 122 RILVSCGTDCTVKLWNV 138
+ S G D LW++
Sbjct: 206 SLCTSGGKDSKALLWDL 222
Score = 127 (49.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 31/78 (39%), Positives = 42/78 (53%)
Query: 62 LDGHRDGIS--CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
L GH IS ++ + NY SGS D +RLWD+A +T ++ GH V + S
Sbjct: 60 LYGHSHFISDVVLSSDGNYA---LSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSA 116
Query: 120 DGRILVSCGTDCTVKLWN 137
D R +VS D T+KLWN
Sbjct: 117 DNRQIVSGSRDKTIKLWN 134
Score = 124 (48.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 32/101 (31%), Positives = 51/101 (50%)
Query: 247 NEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSR 306
+ED N Y Y ++L GH + D+ S G ++GS+D+T+R++ G++
Sbjct: 48 DEDTN-YGYPQKRL-------YGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTT 99
Query: 307 EIY--HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKA 345
+ HTK V V FS D ++SGS D ++LW A
Sbjct: 100 RRFEGHTKD---VLSVAFSADNRQIVSGSRDKTIKLWNTLA 137
Score = 57 (25.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 17/88 (19%), Positives = 37/88 (42%)
Query: 267 HMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDA 326
H GH + + SP G +G D ++ N G++ +Y + + + FS +
Sbjct: 189 HHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKN--LYTLEHNDIINALCFSPNR 246
Query: 327 SYVISGSDDTNLRLWKAKASEQLGVLHP 354
Y + + ++++W + + L P
Sbjct: 247 -YWLCVAYGPSIKIWDLACKKTVEELRP 273
Score = 56 (24.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 23/119 (19%), Positives = 52/119 (43%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVH-MGHESAVMDIDYSPTGREFVTGSYDRTI 295
SP + +D +D L++ K ++ + H + + +SP R ++ +Y +I
Sbjct: 202 SPDGSLCTSGGKDSKALLWD---LNDGKNLYTLEHNDIINALCFSPN-RYWLCVAYGPSI 257
Query: 296 RIFQYNGGRSRE------IYHTKRMQRVFCVK--FSCDASYVISGSDDTNLRLWKAKAS 346
+I+ ++ E + T + + C+ +S D + +G D +R+W+ S
Sbjct: 258 KIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSVS 316
Score = 43 (20.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 6/28 (21%), Positives = 17/28 (60%)
Query: 206 VISVRFNPAEPNVLATTASDRSITLYDL 233
V + NP +P+ + + + D+++ ++ L
Sbjct: 18 VTQIATNPKDPDTIISASRDKTLIVWKL 45
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 39/154 (25%), Positives = 72/154 (46%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVAT 142
SG +D DI++WD+ + GH +V GL++S++G L+S D TV++W+V P A
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAP 270
Query: 143 LXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQ 200
+ + S W+ D G A A V +W+ + +
Sbjct: 271 KERCVKIFQGNVHNFEKNLLRCS-WSPD----GSKIAAGSADRFVYVWDTTSRRVLYKLP 325
Query: 201 WGTDTVISVRFNPAEPNVLATTASDRSITLYDLR 234
++ V F+P EP +L+ + SD+ + + +++
Sbjct: 326 GHAGSINEVAFHPDEPIILSAS-SDKRLYMGEIQ 358
Score = 107 (42.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 27/77 (35%), Positives = 36/77 (46%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDI-ANRRTVCQYSGHQGAVRGLTVSTD 120
L GH + C +PN S D I LW++ + GH GAV L +TD
Sbjct: 63 LSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 121 GRILVSCGTDCTVKLWN 137
G +L S TD TV +W+
Sbjct: 122 GSMLFSASTDKTVAVWD 138
Score = 81 (33.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 23/112 (20%), Positives = 53/112 (47%)
Query: 238 PARK---VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
PAR+ ++ ++D +D RK + ++ V+ + ++ T + ++G D
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ--VLAVTFNDTSDQIISGGIDND 217
Query: 295 IRIFQYNGGRSREIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
I+++ R ++ +T R V + S + SY++S + D +R+W +
Sbjct: 218 IKVWDL---RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 78 (32.5 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 24/107 (22%), Positives = 50/107 (46%)
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV-TGSYDRTIRIFQY 300
++ A+ D +DS + K + GH S V + G + V TGS D T++++
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 301 NGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
+ + + +V V F+ + +ISG D ++++W + ++
Sbjct: 183 R--KKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Score = 60 (26.2 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 24/105 (22%), Positives = 43/105 (40%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSRE----IY----HTKRMQRVFCV 320
GH +V + S G ++ + D T+R++ +E I+ H + C
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC- 292
Query: 321 KFSCDASYVISGSDDTNLRLWKAKASEQLGVL--HPREQRKHAYH 363
+S D S + +GS D + +W + L L H + A+H
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFH 337
Score = 54 (24.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 217 NVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKL-DEAKCVHM--GH--- 270
N L T + ++ L +SS ++ A ++ +D R + +CV + G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 271 -ESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASY 328
E ++ +SP G + GS DR + ++ R +Y + V F D
Sbjct: 285 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS--RRVLYKLPGHAGSINEVAFHPDEPI 342
Query: 329 VISGSDDTNL 338
++S S D L
Sbjct: 343 ILSASSDKRL 352
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 39/154 (25%), Positives = 72/154 (46%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVAT 142
SG +D DI++WD+ + GH +V GL++S++G L+S D TV++W+V P A
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAP 270
Query: 143 LXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQ 200
+ + S W+ D G A A V +W+ + +
Sbjct: 271 KERCVRIFQGNVHNFEKNLLRCS-WSPD----GSKIAAGSADRFVYVWDTTSRRILYKLP 325
Query: 201 WGTDTVISVRFNPAEPNVLATTASDRSITLYDLR 234
++ V F+P EP +L+ + SD+ + + +++
Sbjct: 326 GHAGSINEVAFHPDEPIILSAS-SDKRLYMGEIQ 358
Score = 107 (42.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 27/77 (35%), Positives = 36/77 (46%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDI-ANRRTVCQYSGHQGAVRGLTVSTD 120
L GH + C +PN S D I LW++ + GH GAV L +TD
Sbjct: 63 LSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 121 GRILVSCGTDCTVKLWN 137
G +L S TD TV +W+
Sbjct: 122 GSMLFSASTDKTVAVWD 138
Score = 81 (33.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 24/112 (21%), Positives = 53/112 (47%)
Query: 238 PARK---VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
PAR+ ++ ++D +D RK +A + V+ + ++ T + ++G D
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDIRK--KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDND 217
Query: 295 IRIFQYNGGRSREIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
I+++ R ++ +T R V + S + SY++S + D +R+W +
Sbjct: 218 IKVWDL---RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 79 (32.9 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV-TGSYDRTIRIFQY 300
++ A+ D +DS + K + GH S V + G + V TGS D T++++
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 301 NGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
+ I + +V V F+ + +ISG D ++++W + ++
Sbjct: 183 R--KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Score = 59 (25.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 24/105 (22%), Positives = 43/105 (40%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSRE----IY----HTKRMQRVFCV 320
GH +V + S G ++ + D T+R++ +E I+ H + C
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRC- 292
Query: 321 KFSCDASYVISGSDDTNLRLWKAKASEQLGVL--HPREQRKHAYH 363
+S D S + +GS D + +W + L L H + A+H
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFH 337
Score = 54 (24.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 217 NVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKL-DEAKCVHM--GH--- 270
N L T + ++ L +SS ++ A ++ +D R + +CV + G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVRIFQGNVHN 284
Query: 271 -ESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASY 328
E ++ +SP G + GS DR + ++ R +Y + V F D
Sbjct: 285 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI--LYKLPGHAGSINEVAFHPDEPI 342
Query: 329 VISGSDDTNL 338
++S S D L
Sbjct: 343 ILSASSDKRL 352
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 39/154 (25%), Positives = 72/154 (46%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVAT 142
SG +D DI++WD+ + GH +V GL++S++G L+S D TV++W+V P A
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAP 270
Query: 143 LXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQ 200
+ + S W+ D G A A V +W+ + +
Sbjct: 271 KERCVKIFQGNVHNFEKNLLRCS-WSPD----GSKIAAGSADRFVYVWDTTSRRILYKLP 325
Query: 201 WGTDTVISVRFNPAEPNVLATTASDRSITLYDLR 234
++ V F+P EP +L+ + SD+ + + +++
Sbjct: 326 GHAGSINEVAFHPDEPIILSAS-SDKRLYMGEIQ 358
Score = 107 (42.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 27/77 (35%), Positives = 36/77 (46%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDI-ANRRTVCQYSGHQGAVRGLTVSTD 120
L GH + C +PN S D I LW++ + GH GAV L +TD
Sbjct: 63 LSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 121 GRILVSCGTDCTVKLWN 137
G +L S TD TV +W+
Sbjct: 122 GSMLFSASTDKTVAVWD 138
Score = 81 (33.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 24/112 (21%), Positives = 53/112 (47%)
Query: 238 PARK---VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
PAR+ ++ ++D +D RK +A + V+ + ++ T + ++G D
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDIRK--KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDND 217
Query: 295 IRIFQYNGGRSREIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
I+++ R ++ +T R V + S + SY++S + D +R+W +
Sbjct: 218 IKVWDL---RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 79 (32.9 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV-TGSYDRTIRIFQY 300
++ A+ D +DS + K + GH S V + G + V TGS D T++++
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 301 NGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
+ I + +V V F+ + +ISG D ++++W + ++
Sbjct: 183 R--KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Score = 59 (25.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 24/105 (22%), Positives = 43/105 (40%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSRE----IY----HTKRMQRVFCV 320
GH +V + S G ++ + D T+R++ +E I+ H + C
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC- 292
Query: 321 KFSCDASYVISGSDDTNLRLWKAKASEQLGVL--HPREQRKHAYH 363
+S D S + +GS D + +W + L L H + A+H
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFH 337
Score = 53 (23.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 217 NVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKL-DEAKCVHM--GH--- 270
N L T + ++ L +SS ++ A ++ +D R + +CV + G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 271 -ESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASY 328
E ++ +SP G + GS DR + ++ R +Y + V F D
Sbjct: 285 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI--LYKLPGHAGSINEVAFHPDEPI 342
Query: 329 VISGSDDTNL 338
++S S D L
Sbjct: 343 ILSASSDKRL 352
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 39/154 (25%), Positives = 72/154 (46%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVAT 142
SG +D DI++WD+ + GH +V GL++S++G L+S D TV++W+V P A
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAP 270
Query: 143 LXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQ 200
+ + S W+ D G A A V +W+ + +
Sbjct: 271 KERCVKIFQGNVHNFEKNLLRCS-WSPD----GSKIAAGSADRFVYVWDTTSRRILYKLP 325
Query: 201 WGTDTVISVRFNPAEPNVLATTASDRSITLYDLR 234
++ V F+P EP +L+ + SD+ + + +++
Sbjct: 326 GHAGSINEVAFHPDEPIILSAS-SDKRLYMGEIQ 358
Score = 107 (42.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 27/77 (35%), Positives = 36/77 (46%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDI-ANRRTVCQYSGHQGAVRGLTVSTD 120
L GH + C +PN S D I LW++ + GH GAV L +TD
Sbjct: 63 LSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 121 GRILVSCGTDCTVKLWN 137
G +L S TD TV +W+
Sbjct: 122 GSMLFSASTDKTVAVWD 138
Score = 81 (33.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 24/112 (21%), Positives = 53/112 (47%)
Query: 238 PARK---VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
PAR+ ++ ++D +D RK +A + V+ + ++ T + ++G D
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDIRK--KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDND 217
Query: 295 IRIFQYNGGRSREIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
I+++ R ++ +T R V + S + SY++S + D +R+W +
Sbjct: 218 IKVWDL---RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 79 (32.9 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV-TGSYDRTIRIFQY 300
++ A+ D +DS + K + GH S V + G + V TGS D T++++
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 301 NGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
+ I + +V V F+ + +ISG D ++++W + ++
Sbjct: 183 R--KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Score = 59 (25.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 24/105 (22%), Positives = 43/105 (40%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSRE----IY----HTKRMQRVFCV 320
GH +V + S G ++ + D T+R++ +E I+ H + C
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC- 292
Query: 321 KFSCDASYVISGSDDTNLRLWKAKASEQLGVL--HPREQRKHAYH 363
+S D S + +GS D + +W + L L H + A+H
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFH 337
Score = 53 (23.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 217 NVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKL-DEAKCVHM--GH--- 270
N L T + ++ L +SS ++ A ++ +D R + +CV + G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 271 -ESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVKFSCDASY 328
E ++ +SP G + GS DR + ++ R +Y + V F D
Sbjct: 285 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI--LYKLPGHAGSINEVAFHPDEPI 342
Query: 329 VISGSDDTNL 338
++S S D L
Sbjct: 343 ILSASSDKRL 352
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 39/150 (26%), Positives = 72/150 (48%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATL 143
SG++DG I ++D+A + V GH VR L S + ++L++ D +KL++V + +
Sbjct: 187 SGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDV 246
Query: 144 XXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQW 201
W V +G FA++ + V IW+ + + +++F
Sbjct: 247 VGTLSGHAS---------W---VLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAE 294
Query: 202 GTDTVISVRFNPAEPNVLATTASDRSITLY 231
TD V VR++P V A+ + D+S+ +Y
Sbjct: 295 HTDQVWGVRYSPGNDKV-ASASEDKSLNIY 323
Score = 104 (41.7 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 237 SPARKVIMRANED--CNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
SP K ++ D + YS ++ K ++ G + + I YSP G+ +G+ D
Sbjct: 136 SPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYT--LSIAYSPDGKYIASGAIDGI 193
Query: 295 IRIFQYNGGRSREIYHTKRMQ-RVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVL 352
I IF G+ + M R C FS ++ +++ SDD +++L+ S+ +G L
Sbjct: 194 ITIFDVAAGKVVQTLEGHAMPVRSLC--FSPNSQLLLTASDDGHMKLYDVTHSDVVGTL 250
Score = 104 (41.7 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 35/140 (25%), Positives = 71/140 (50%)
Query: 204 DTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEA 263
D +I++ F+ A V+ T ++ + L S P ++++ A++D + YD D
Sbjct: 191 DGIITI-FDVAAGKVVQTLEG-HAMPVRSLCFS-PNSQLLLTASDDGHMKLYDVTHSDVV 247
Query: 264 KCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHT--KRMQRVFCVK 321
+ GH S V+ + +S G+ F + S D +++I+ + R+ HT + +V+ V+
Sbjct: 248 GTLS-GHASWVLCVAFSEDGKHFASSSSDNSVKIWDTS---ERKCLHTFAEHTDQVWGVR 303
Query: 322 FSCDASYVISGSDDTNLRLW 341
+S V S S+D +L ++
Sbjct: 304 YSPGNDKVASASEDKSLNIY 323
Score = 83 (34.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 80 KGFF-SGSMDGDIRLWDIANRRTVC---QYSGHQGAVRGLTVSTDGRILVSCGTDCTVKL 135
K F +G +D +++WD+ T+ + GH V + VS+DG+ + S D T+ L
Sbjct: 52 KDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCL 111
Query: 136 WN 137
W+
Sbjct: 112 WD 113
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 148 (57.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GHR + +A +P+ + SG DG I +WD++ R + GH V L+ S +G +
Sbjct: 542 GHRSMVLSLAMSPDG-RYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSL 600
Query: 124 LVSCGTDCTVKLWNVPVAT 142
L S DCTVKLW+V +T
Sbjct: 601 LASGSADCTVKLWDVTSST 619
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/220 (25%), Positives = 89/220 (40%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLA 158
RR+ GH G V T S G ++S D T++LW+ L P
Sbjct: 408 RRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTK---LNANLVCYKGHNYP-- 462
Query: 159 VYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNV 218
VW F H + + IW+ +R QP+ V V+++P N
Sbjct: 463 --VWDAQFSPFGHYFAS---CSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHP-NCNY 516
Query: 219 LATTASDRSITLYDLRMS------------------SPARKVIMRANEDCNCYSYDSRKL 260
+AT +SD+++ L+D++ SP + + +ED +D L
Sbjct: 517 IATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWD---L 573
Query: 261 DEAKCVH--MGHESAVMDIDYSPTGREFVTGSYDRTIRIF 298
A+C+ MGH S V + YS G +GS D T++++
Sbjct: 574 STARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 130 (50.8 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 32/111 (28%), Positives = 54/111 (48%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
SP ++ ++ D + S KL+ + GH V D +SP G F + S+DRT R
Sbjct: 427 SPPGDFVLSSSADTTIRLW-STKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTAR 485
Query: 297 IFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
I+ + + I + V CV++ + +Y+ +GS D +RLW + E
Sbjct: 486 IWSMDRIQPLRIM-AGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGE 535
Score = 44 (20.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 108 HQGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
H G + ++S DG ++ +D ++K+W++
Sbjct: 352 HNG-LNCSSISHDGSLVAGGFSDSSIKVWDM 381
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 130 (50.8 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 46/195 (23%), Positives = 85/195 (43%)
Query: 69 ISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCG 128
+SC +P +L+ GS DG I++ ++ N R + H+ VR + +TDG+ ++S
Sbjct: 964 VSCCCLSP-HLQYLAFGSDDGAIQVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSS 1022
Query: 129 TDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIW 188
D +++WN + + KNS W D V +W
Sbjct: 1023 DDSAIQVWNWQSEETVSLQAHQETVKD---FRLLKNSRLL---SWSFD------GTVKVW 1070
Query: 189 NHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANE 248
N + F DTV+S +P + ++T++D++ ++ + SP + +R ++
Sbjct: 1071 NIITGRIEKDFVCHQDTVLSCDISP-DATKFSSTSADKTAKIWSFDLLSPLHE--LRGHK 1127
Query: 249 DC-NC--YSYDSRKL 260
C C +S DS L
Sbjct: 1128 GCVRCSAFSVDSTLL 1142
Score = 126 (49.4 bits), Expect = 0.00025, P = 0.00025
Identities = 75/302 (24%), Positives = 119/302 (39%)
Query: 59 IGALDGHRDGISC--MAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLT 116
+ + D H + ++C N N+L +GS D ++LWD+ + GH +V
Sbjct: 692 VQSYDEHSEQVNCCHFTNNSNHLL-LATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCR 750
Query: 117 VSTDGRILVSCGTDCTVKLWNVPVAT------LXXXXXXXXXXXEPLAVYVWKNSFWAVD 170
S D ++L SC D T+KLW+V A + E + V V K W+ D
Sbjct: 751 FSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQEDMEVMV-KCCSWSAD 809
Query: 171 HQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISV-RFNPAEPNVLATTA-SDRSI 228
L A +V ++N + + G + I F+P+ N LA A S +
Sbjct: 810 G---ASLVVAAKNKVLLFNIHTGGLLAEIHTGHHSTIQYCDFSPS--NHLAVVALSQYCV 864
Query: 229 TLYDLRMSSPARKVIMRANED---CNCYSYDSRKL-----DEA----KCVHMGHESAVM- 275
L++ M S + R + C +S D DE + + SA++
Sbjct: 865 ELWN--MDSCLKVADCRGHLSWVHCAMFSPDGSSFLTSSDDETIRLWETKKVCKNSAIVL 922
Query: 276 --DIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGS 333
ID E + + D IR Q G++ +I + Q V C S Y+ GS
Sbjct: 923 NKKIDVVFQENEVMVLAVDN-IRRLQVINGKTGQIDYLTEAQ-VSCCCLSPHLQYLAFGS 980
Query: 334 DD 335
DD
Sbjct: 981 DD 982
Score = 106 (42.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 44/209 (21%), Positives = 88/209 (42%)
Query: 39 VEYVRALTAAKLEKIFARPFIGALDGHRDGI--SCMAKNPNYLKGFFSGSMDGDIRLWDI 96
+E++ L ++ RP H D + +C +++ + S D ++++
Sbjct: 595 LEWINKKNIKNLSRLVVRP-------HTDAVYHACFSEDGQRIA---SCGADKTLQVFKA 644
Query: 97 ANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEP 156
+ + H+ V S D R + +C D VK+WN L
Sbjct: 645 ETGEKLLEIKAHEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVN- 703
Query: 157 LAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQWGTDTVISVRFNPA 214
+ NS +H L AT + + +W+ N+ + N+ T++V RF+P
Sbjct: 704 -CCHFTNNS----NHL----LLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSP- 753
Query: 215 EPNVLATTASDRSITLYDLRMSSPARKVI 243
+ +LA+ ++D ++ L+D++ S+ RK I
Sbjct: 754 DDKLLASCSADGTLKLWDVK-SANERKSI 781
Score = 95 (38.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 23/81 (28%), Positives = 40/81 (49%)
Query: 270 HESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG-GRSREIYHTKRMQRVFCVKFSCDASY 328
H+ V+ D SP +F + S D+T +I+ ++ E+ K R C FS D++
Sbjct: 1084 HQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVR--CSAFSVDSTL 1141
Query: 329 VISGSDDTNLRLWKAKASEQL 349
+ +G D+ +R+W E L
Sbjct: 1142 LATGDDNGEIRIWNVSNGELL 1162
Score = 49 (22.3 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 270 HESAVMDIDYSPTGREFVT-GSYDRTIRIFQYNGGRSREIYHT 311
H V D+ +SP G+ V+ G Y ++ + + G+S + ++T
Sbjct: 1177 HGGWVTDLRFSPDGKMLVSAGGY---LKWWNVDSGKSIQTFYT 1216
Score = 39 (18.8 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHT 311
GH+ V +S TG + IRI+ + G E+ H+
Sbjct: 1125 GHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNG---ELLHS 1164
>TAIR|locus:2092722 [details] [associations]
symbol:LST8-1 "AT3G18140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005768 "endosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0048571
"long-day photoperiodism" evidence=IMP] [GO:1900088 "regulation of
inositol biosynthetic process" evidence=IMP] [GO:1900091
"regulation of raffinose biosynthetic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005768 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB020749 HSSP:P16649 GO:GO:0048571 OMA:NNKGNCY
EMBL:AY087463 EMBL:BT002312 IPI:IPI00542303 RefSeq:NP_188442.1
UniGene:At.6055 ProteinModelPortal:Q9LV27 SMR:Q9LV27 IntAct:Q9LV27
STRING:Q9LV27 PRIDE:Q9LV27 EnsemblPlants:AT3G18140.1 GeneID:821339
KEGG:ath:AT3G18140 TAIR:At3g18140 InParanoid:Q9LV27
PhylomeDB:Q9LV27 ProtClustDB:CLSN2683726 Genevestigator:Q9LV27
GO:GO:1900088 GO:GO:1900091 Uniprot:Q9LV27
Length = 305
Score = 116 (45.9 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 42/182 (23%), Positives = 83/182 (45%)
Query: 179 ATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATT-ASDRSIT-LYDLRMS 236
+ A + + N+++ I+ Q G V +R N ++ + RS+T ++D M
Sbjct: 118 SVAAVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTM- 176
Query: 237 SPARKVIMRANEDCNCYSY----DSRKLDEAKCVH--MGHESAVMDIDYSPTGREFVTGS 290
++ AN CY + + + E + +H H ++ SP + T S
Sbjct: 177 ------VVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATAS 230
Query: 291 YDRTIRIFQYNGGRSREIYHTKRMQRVF-CVKFSCDASYVISGSDDTNLRLWKAKASEQL 349
D+T++I+ +G + ++ T + V+ CV FS D ++++ S D RLW A +++
Sbjct: 231 SDKTVKIWNVDGFKLEKVL-TGHQRWVWDCV-FSVDGEFLVTASSDMTARLWSMPAGKEV 288
Query: 350 GV 351
V
Sbjct: 289 KV 290
Score = 91 (37.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 26/85 (30%), Positives = 39/85 (45%)
Query: 237 SPARKVIMRANED--CNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
SPA K + A+ D ++ D KL++ V GH+ V D +S G VT S D T
Sbjct: 220 SPANKYLATASSDKTVKIWNVDGFKLEK---VLTGHQRWVWDCVFSVDGEFLVTASSDMT 276
Query: 295 IRIFQYNGGRSREIYHTKRMQRVFC 319
R++ G+ ++Y V C
Sbjct: 277 ARLWSMPAGKEVKVYQGHHKATVCC 301
Score = 78 (32.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 31/175 (17%), Positives = 69/175 (39%)
Query: 63 DGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQ-GAVRGLTVSTDG 121
D H + + + + K +SGS DG +++WD+ R CQ AV + + +
Sbjct: 75 DSHTNNVMAVGFQCD-AKWMYSGSEDGTVKIWDL--RAPGCQKEYESVAAVNTVVLHPNQ 131
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFA-- 179
L+S + +++W++ + +W + + G +
Sbjct: 132 TELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANN-RGTCYVWR 190
Query: 180 -TAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
G Q +P++ Q ++ +PA LAT +SD+++ ++++
Sbjct: 191 LLRGKQT----MTEFEPLHKLQAHNGHILKCLLSPAN-KYLATASSDKTVKIWNV 240
Score = 68 (29.0 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 80 KGFFSGSMDGDIRLWDIANR--RTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
K + + + + IRL+D+ + + V Y H V + D + + S D TVK+W+
Sbjct: 47 KHYLAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWD 106
Query: 138 V 138
+
Sbjct: 107 L 107
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 100 (40.3 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
SG G +++WD+ RR + H AVRG+ DG + +S G D V ++N
Sbjct: 164 SGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYN 217
Score = 97 (39.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 55/207 (26%), Positives = 88/207 (42%)
Query: 172 QWEGDL-----FAT----AGAQVDI-WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLAT 221
+W G+L FA AGA I + ++++P TD I P PN +
Sbjct: 409 RWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVK 468
Query: 222 T------ASDRSITLYDLRMSSPARKVIMRANEDC--NCYSYDSRKLDEAKCVHMGHESA 273
T A D+ I D+ SP + A+ D + DS E V GH+
Sbjct: 469 TSEYTRRAHDKDINSIDV---SPNDEYFATASYDKLGKVWQTDS---GETIGVLKGHKRG 522
Query: 274 VMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVIS 331
+ DI++ + VTGS D+TI+++ ++ HT +QRV F+ + ++S
Sbjct: 523 LWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKF--FNREHPQLLS 580
Query: 332 GSDDTNLRLWKAKASEQLGVLHPREQR 358
D ++LW K E + L +QR
Sbjct: 581 CGADGLIKLWDYKQGEIIKSLDNHDQR 607
Score = 74 (31.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 24/61 (39%), Positives = 29/61 (47%)
Query: 83 FSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV-----STDGRILVSCGTDCTVKLWN 137
F GS DG I +WDI N GH + LT S D R L S T TVK+W+
Sbjct: 118 FGGS-DGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWR-LASGDTMGTVKIWD 175
Query: 138 V 138
+
Sbjct: 176 L 176
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 100 (40.3 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
SG G +++WD+ RR + H AVRG+ DG + +S G D V ++N
Sbjct: 164 SGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYN 217
Score = 97 (39.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 55/207 (26%), Positives = 88/207 (42%)
Query: 172 QWEGDL-----FAT----AGAQVDI-WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLAT 221
+W G+L FA AGA I + ++++P TD I P PN +
Sbjct: 409 RWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVK 468
Query: 222 T------ASDRSITLYDLRMSSPARKVIMRANEDC--NCYSYDSRKLDEAKCVHMGHESA 273
T A D+ I D+ SP + A+ D + DS E V GH+
Sbjct: 469 TSEYTRRAHDKDINSIDV---SPNDEYFATASYDKLGKVWQTDS---GETIGVLKGHKRG 522
Query: 274 VMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVIS 331
+ DI++ + VTGS D+TI+++ ++ HT +QRV F+ + ++S
Sbjct: 523 LWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKF--FNREHPQLLS 580
Query: 332 GSDDTNLRLWKAKASEQLGVLHPREQR 358
D ++LW K E + L +QR
Sbjct: 581 CGADGLIKLWDYKQGEIIKSLDNHDQR 607
Score = 74 (31.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 24/61 (39%), Positives = 29/61 (47%)
Query: 83 FSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV-----STDGRILVSCGTDCTVKLWN 137
F GS DG I +WDI N GH + LT S D R L S T TVK+W+
Sbjct: 118 FGGS-DGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWR-LASGDTMGTVKIWD 175
Query: 138 V 138
+
Sbjct: 176 L 176
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 147 (56.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 66/273 (24%), Positives = 112/273 (41%)
Query: 95 DIANRRTVCQYS--GHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXX 152
D+AN + C + GH+ AV ++ S D R+L S D TVK+W+ +L
Sbjct: 280 DVANHWSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSD 339
Query: 153 XXEPLAVYVWKNSFWAVDHQWEGDLFATAG-AQVDIWNHNRSQPINSFQWGTDTVISVRF 211
+ ++ H + L A+A + V IW+ ++ + D V SV F
Sbjct: 340 LVRSV-IF---------SH--DSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF 387
Query: 212 NPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANED---CNCYSYDSRKLDEAK---- 264
+ + +LA+ + D ++ ++D S + + D +S+DS+ L A
Sbjct: 388 SH-DSQLLASASDDSTVKIWDTGTGSLQHT--LEGHRDWVRSVIFSHDSQLLASASDDST 444
Query: 265 ----------CVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK 312
H GH V + +S R + S DRT+RI+ G +
Sbjct: 445 VKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEG- 503
Query: 313 RMQRVFCVKFSCDASYVISGSDDTNLRLWKAKA 345
V V FS D+ + S S+D +R+W +A
Sbjct: 504 HSSLVTSVSFSHDSRLLASASNDQTVRIWDIEA 536
Score = 145 (56.1 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 67/276 (24%), Positives = 112/276 (40%)
Query: 57 PFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLT 116
P + AL+GH + ++ + + + S S D +++WD GH VR +
Sbjct: 287 PCLQALEGHEAAVLSVSYSHDS-RLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVI 345
Query: 117 VSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGD 176
S D R+L S +D TVK+W+ +L W S H +
Sbjct: 346 FSHDSRLLASA-SDSTVKIWDTGTGSLQHTLEGHRD---------WVRSV-IFSH--DSQ 392
Query: 177 LFATAG--AQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLR 234
L A+A + V IW+ ++ + D V SV F+ + +LA+ + D ++ ++D
Sbjct: 393 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSH-DSQLLASASDDSTVKIWDTG 451
Query: 235 MSSPARKVIMRANED---CNCYSYDSRKL------------DEAKCVHM----GHESAVM 275
S + + D +S+DSR L D K H GH S V
Sbjct: 452 TGSLQHT--LEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVT 509
Query: 276 DIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHT 311
+ +S R + S D+T+RI+ +R + HT
Sbjct: 510 SVSFSHDSRLLASASNDQTVRIWDIE---ARSLQHT 542
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 133 (51.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 35/123 (28%), Positives = 54/123 (43%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
SP + + D + +D R K GHES + + + P+G F TGS D T R
Sbjct: 193 SPDFRTFISGACDASAKLWDIRD-GMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCR 251
Query: 297 IFQYNGGRSREIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPR 355
+F + +Y H + + V FS + +G DD N +W + E+ GVL
Sbjct: 252 LFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAGVLAGH 311
Query: 356 EQR 358
+ R
Sbjct: 312 DNR 314
Score = 102 (41.0 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 62 LDGHRDGISCMA-KNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTD 120
L GH +SC + N + + S D LWDI + ++GH G V L++S D
Sbjct: 139 LPGHTGYLSCCRFLDDNQI---VTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPD 195
Query: 121 GRILVSCGTDCTVKLWNV 138
R +S D + KLW++
Sbjct: 196 FRTFISGACDASAKLWDI 213
Score = 85 (35.0 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 197 NSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRANEDCNCYSYD 256
N+F G+D F+ LA + D I S + +++ +D NC +D
Sbjct: 239 NAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWD 298
Query: 257 SRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIF 298
S + + A V GH++ V + + G TGS+D ++I+
Sbjct: 299 SMRQERAG-VLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIW 339
Score = 68 (29.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 24/105 (22%), Positives = 42/105 (40%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDE-AKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIR 296
P+ ++D C +D R E A H + + +S +GR G D
Sbjct: 236 PSGNAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCN 295
Query: 297 IFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
++ + + R RV C+ + D V +GS D+ L++W
Sbjct: 296 VWD-SMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIW 339
Score = 45 (20.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 99 RRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWN 137
RRT+ GH + + ++D R LVS D + +W+
Sbjct: 48 RRTL---RGHLAKIYAMHWASDSRNLVSASQDGKLIVWD 83
>RGD|1305996 [details] [associations]
symbol:Wdfy1 "WD repeat and FYVE domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305996 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GeneTree:ENSGT00670000098022 CTD:57590 EMBL:BC085807
IPI:IPI00362952 RefSeq:NP_001008332.1 UniGene:Rn.8557 STRING:Q5U2Y7
Ensembl:ENSRNOT00000063834 GeneID:301549 KEGG:rno:301549
UCSC:RGD:1305996 NextBio:648925 Genevestigator:Q5U2Y7
Uniprot:Q5U2Y7
Length = 193
Score = 133 (51.9 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 42/151 (27%), Positives = 64/151 (42%)
Query: 40 EYVRALTAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANR 99
+Y +T KLE+ I L GH I+C+ +P + FSG+ D I +WDI R
Sbjct: 34 DYSGQITLLKLEQNSCS-VITTLKGHEGSIACLWWDP-IQRLLFSGASDNSIIMWDIGGR 91
Query: 100 --RTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPL 157
RT+ GH V+ L R LVSC D + +WN+ V+ +
Sbjct: 92 KGRTLL-LQGHHDRVQSLCYLQLTRQLVSCSADGGIAVWNMDVSREEAPQWLESDSCQKC 150
Query: 158 AVYVWKNSFWAVDHQWEGDLFATAGAQVDIW 188
+ FW + W+ T G + ++W
Sbjct: 151 E----QPFFWNIKQMWDTK---TLGLRQEVW 174
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 159 (61.0 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 67/284 (23%), Positives = 118/284 (41%)
Query: 68 GISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSC 127
GI+ P L FS + I+LWD + ++ H+G VRGL I VS
Sbjct: 16 GIAFHPSRPWVLVALFSST----IQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSA 71
Query: 128 GTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDI 187
G D T+K+W++ YV + F+ + W + A+ + I
Sbjct: 72 GDDYTIKVWSLDTNKCLYTLTGHLD-------YV-RTVFFHRELPWI--ISASDDQTIRI 121
Query: 188 WNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL-----RMSSPARKV 242
WN + I V+ +F+P + +++ + + D +I ++D+ R S+P
Sbjct: 122 WNWQNRKEIACLTGHNHFVMCAQFHPTD-DLIVSASLDETIRIWDISGLRKRHSAPGTSS 180
Query: 243 I---MRANEDCNCYSYDSRKLD-EAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIF 298
M A ++ D D K + GH V + PT V+GS DR ++++
Sbjct: 181 FEEQMSAQQNL----LDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLW 236
Query: 299 QYNGGRSREIYHTK-RMQRVFCVKFSCDASYVISGSDDTNLRLW 341
+ + ++ E+ + V V F + +IS +D LR+W
Sbjct: 237 RMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVW 280
Score = 38 (18.4 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 352 LHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHL 385
+ P E R + +A+ N K+ PE+ R+++ +L
Sbjct: 596 IDPTEYR---FKKALVN--KNFPEVLRLIKDSNL 624
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVA 141
SG +D DI++WD+ + GH +V GL++S++G L+S D TV++W+V P A
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 269
Score = 106 (42.4 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 27/77 (35%), Positives = 35/77 (45%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDI-ANRRTVCQYSGHQGAVRGLTVSTD 120
L GH + C +PN S D I LW + + GH GAV L +TD
Sbjct: 63 LSGHEGEVYCCKFHPNG-STLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 121 GRILVSCGTDCTVKLWN 137
G +L S TD TV +W+
Sbjct: 122 GSMLFSASTDKTVAVWD 138
Score = 81 (33.6 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 24/112 (21%), Positives = 53/112 (47%)
Query: 238 PARK---VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
PAR+ ++ ++D +D RK +A + V+ + ++ T + ++G D
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDIRK--KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDND 217
Query: 295 IRIFQYNGGRSREIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
I+++ R ++ +T R V + S + SY++S + D +R+W +
Sbjct: 218 IKVWDL---RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 79 (32.9 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV-TGSYDRTIRIFQY 300
++ A+ D +DS + K + GH S V + G + V TGS D T++++
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 301 NGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
+ I + +V V F+ + +ISG D ++++W + ++
Sbjct: 183 R--KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Score = 71 (30.1 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSRE----IY----HTKRMQRVFCV 320
GH +V + S G ++ + D T+R++ +E I+ H + C
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC- 292
Query: 321 KFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHEAVK 367
+S D S + +GS D+ L W + + LG + PR R ++VK
Sbjct: 293 SWSPDGSKIAAGSADSFLYPWHSLSVRSLGQI-PRH-RLSRQEDSVK 337
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 143 (55.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 63/283 (22%), Positives = 121/283 (42%)
Query: 97 ANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEP 156
A + + GH ++ + S G+ L + D TVK+WN +
Sbjct: 67 AGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWN-----MSDLSCERTLTGHK 121
Query: 157 LAVYVWKNSF-WAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAE 215
L V N F W+ D + + A+ + I+ + + + T+ V FNP +
Sbjct: 122 LGV----NDFAWSADSK--SIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNP-Q 174
Query: 216 PNVLATTASDRSITLYDLRMSS-----PARKVIMRA---NEDCNCY---SYDS--RKLDE 262
+++ + + D S+ ++D+R PA + A N D + SYD R D
Sbjct: 175 SSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDT 234
Query: 263 A--KCVH--MGHESA-VMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRV 317
A +CV + E+ V + +SP G+ ++ + D T++++ + G++ + Y +
Sbjct: 235 ANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNK- 293
Query: 318 FCV--KFSCDAS-YVISGSDDTNLRLWKAKASEQLGVLHPREQ 357
+C+ FS ++ISGS+D + +W + E + L Q
Sbjct: 294 YCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQ 336
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 65/305 (21%), Positives = 128/305 (41%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGD--IRLWDIANRRTVCQYSGHQGAVRGLT 116
I ++GH IS + +P G F G+ D +++W++++ +GH+ V
Sbjct: 72 ISTIEGHTKSISAVKFSPC---GKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFA 128
Query: 117 VSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXX-----EPLAVYVWKNSFWAVDH 171
S D + +V+ D T+K++ VP + P + V SF
Sbjct: 129 WSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVR 188
Query: 172 QWE---GDLFATAGAQVD---IWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASD 225
W+ G T A D + NR + + D ++ + ++ A + T D
Sbjct: 189 IWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLIT-SGSYDGLVRI-WDTANGQCVKTLVDD 246
Query: 226 RSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDI--DYSPTG 283
+ + ++ S P K I+ +N D +D K K + GHE+ I ++S TG
Sbjct: 247 ENPPVAFVKFS-PNGKYILSSNLDNTLKLWDFGKGKTLK-QYQGHENNKYCIFANFSVTG 304
Query: 284 REFV-TGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDA--SYVISGS--DDTNL 338
+++ +GS D +I+ +N +++E+ + + C + + SG+ D +
Sbjct: 305 GKWIISGSED--CKIYVWNL-QTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTI 361
Query: 339 RLWKA 343
R+W++
Sbjct: 362 RIWRS 366
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 125 (49.1 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 36/136 (26%), Positives = 60/136 (44%)
Query: 84 SGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNV-PVAT 142
SG +D DI++WD+ + GH +V GL++S++G L+S D TV++W+V P A
Sbjct: 210 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAP 269
Query: 143 LXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIWNHNRSQPINSFQ 200
+ + S W+ D G A A V +W+ + +
Sbjct: 270 KERCVKIFQGNVHNFEKNLLRCS-WSPD----GSKIAAGSADRFVYVWDTTSRRILYKLP 324
Query: 201 WGTDTVISVRFNPAEP 216
++ V F+P EP
Sbjct: 325 GHAGSINEVAFHPDEP 340
Score = 107 (42.7 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 27/77 (35%), Positives = 36/77 (46%)
Query: 62 LDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDI-ANRRTVCQYSGHQGAVRGLTVSTD 120
L GH + C +PN S D I LW++ + GH GAV L +TD
Sbjct: 62 LSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 120
Query: 121 GRILVSCGTDCTVKLWN 137
G +L S TD TV +W+
Sbjct: 121 GSMLFSASTDKTVAVWD 137
Score = 81 (33.6 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 24/112 (21%), Positives = 53/112 (47%)
Query: 238 PARK---VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRT 294
PAR+ ++ ++D +D RK +A + V+ + ++ T + ++G D
Sbjct: 159 PARRGPQLVCTGSDDGTVKLWDIRK--KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDND 216
Query: 295 IRIFQYNGGRSREIYHTKR--MQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
I+++ R ++ +T R V + S + SY++S + D +R+W +
Sbjct: 217 IKVWDL---RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
Score = 79 (32.9 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 242 VIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFV-TGSYDRTIRIFQY 300
++ A+ D +DS + K + GH S V + G + V TGS D T++++
Sbjct: 123 MLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 181
Query: 301 NGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
+ I + +V V F+ + +ISG D ++++W + ++
Sbjct: 182 R--KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 226
Score = 59 (25.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/105 (22%), Positives = 43/105 (40%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSRE----IY----HTKRMQRVFCV 320
GH +V + S G ++ + D T+R++ +E I+ H + C
Sbjct: 233 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC- 291
Query: 321 KFSCDASYVISGSDDTNLRLWKAKASEQLGVL--HPREQRKHAYH 363
+S D S + +GS D + +W + L L H + A+H
Sbjct: 292 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFH 336
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 147 (56.8 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 81/354 (22%), Positives = 149/354 (42%)
Query: 1 MKVKVISRSTDEFTRERSQDLQRVYHN-----YDPNLRPQEKAVEYVRALTAAKLEKIFA 55
MK++ + + R L+ H YD N+ + +E V + K+ ++
Sbjct: 366 MKLEAKTNKFEGTMRHIQASLEATQHQLSETVYDLNIIKKNSNLESVD-IVDLKIPQLKC 424
Query: 56 RPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGL 115
+ G GH I CM L SGS D +++WD+ + SGH+G V L
Sbjct: 425 K---GTFVGHNGPIWCMTVTNGML---ISGSSDMKVKIWDLVTLKCKQVLSGHEGIVHTL 478
Query: 116 TVSTDGRILVSCGTDCTVKLWNVPV-ATLXXXXXXXXXXXEPLAV-YVWKNSFWAVDHQW 173
V G L S +D T+++W++ L +A Y++ SF + W
Sbjct: 479 AVI--GNRLFSGSSDQTIRVWDLETFECLSVLRDDNTVCALVIAAGYLFSGSFQHIK-VW 535
Query: 174 EGDLFATAGAQVDIWNHNRSQPINS--FQWGTDTVISVRFNPAEPNVLATTASDRSITLY 231
+ + F + R+ ++ G V+ V ++ A + T S ++Y
Sbjct: 536 DLETFECVQTLKGNSHWVRALTVSGGYLYSGAYNVVRV-WDLANFECVQTIPGG-SGSIY 593
Query: 232 DLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHM--GHESAVMDIDYSPTGREFVTG 289
L +S+ R+++ E+ + LD + ++ GH AV + S ++F +G
Sbjct: 594 SLAVSN--RRLLAGTYEN----TIVVWNLDTFEIINKLEGHIGAVYTLAVSD--KKFYSG 645
Query: 290 SYDRTIRIFQYNGGRSREIY-HTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK 342
SYD TI+++ + + + HT ++ + V C V SGS D ++++WK
Sbjct: 646 SYDSTIKVWNDSLVCVQTLNRHTSSVESIV-VSSGC----VFSGSADNSIKVWK 694
>FB|FBgn0015834 [details] [associations]
symbol:Trip1 "Trip1" species:7227 "Drosophila melanogaster"
[GO:0003743 "translation initiation factor activity"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS;NAS] [GO:0005829 "cytosol" evidence=NAS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
KO:K03246 HAMAP:MF_03008 GeneTree:ENSGT00630000089849 OMA:ATVAGWS
EMBL:U90930 EMBL:AY118527 RefSeq:NP_523478.1 UniGene:Dm.2654
ProteinModelPortal:O02195 SMR:O02195 DIP:DIP-18772N IntAct:O02195
MINT:MINT-1576694 STRING:O02195 PaxDb:O02195 PRIDE:O02195
EnsemblMetazoa:FBtr0079053 GeneID:33710 KEGG:dme:Dmel_CG8882
UCSC:CG8882-RA CTD:33710 FlyBase:FBgn0015834 InParanoid:O02195
OrthoDB:EOG463XTJ PhylomeDB:O02195 ChiTaRS:PSMC5 GenomeRNAi:33710
NextBio:784905 Bgee:O02195 GermOnline:CG8882 Uniprot:O02195
Length = 326
Score = 105 (42.0 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 41/181 (22%), Positives = 71/181 (39%)
Query: 56 RPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGL 115
RP + L GH I+ + N FS S D +W N + Y GHQGAV L
Sbjct: 2 RPLM--LQGHERSITQIKYNREG-DLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCL 58
Query: 116 TVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQW-- 173
V + R L++ D T K+W+V T+ + + ++ D
Sbjct: 59 DVDWESRKLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQ 118
Query: 174 EGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDL 233
+LF D + + +P + S+ + P + ++ T + +I ++D+
Sbjct: 119 SCELFLIDVRNADS-SLSEQEPTLRIPMTESKITSMLWGPLDETII-TGHDNGNIAIWDI 176
Query: 234 R 234
R
Sbjct: 177 R 177
Score = 80 (33.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 28/112 (25%), Positives = 45/112 (40%)
Query: 238 PARKVIMRANEDCNCYSYDSRKLDEAKCVHMG--HESAVMDIDYSPTGREFVTGSYDRTI 295
P + I+ +++ N +D RK K V G H + + D+ S G FVT S D T
Sbjct: 157 PLDETIITGHDNGNIAIWDIRK--GQKVVDSGTDHSAGINDMQLSKDGTMFVTASKDTTA 214
Query: 296 RIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASE 347
++F + Y T+R + D + G D + KA +
Sbjct: 215 KLFDSESLMCLKTYKTERPVNSAAISPIMDHVVLGGGQDAMEVTTTSTKAGK 266
Score = 49 (22.3 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 8/41 (19%), Positives = 19/41 (46%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIY 309
GH + + + P G+ + +G D +R+ ++ I+
Sbjct: 285 GHFGPINSLAFHPDGKSYASGGEDGFVRVQTFDSTYFENIF 325
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 146 (56.5 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH+ I +A +PN K SGS DG + LWDI + + + GH G + L S DG I
Sbjct: 623 GHKGPIHSLAFSPNG-KFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEI 681
Query: 124 LVSCGTDCTVKLWNV 138
+ S D TV+LW+V
Sbjct: 682 IASGSIDNTVRLWDV 696
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH ++C +PN +GS D +RLWD+ N V ++GH+G + L S +G+
Sbjct: 581 GHLADVTCTRFHPNS-NYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKF 639
Query: 124 LVSCGTDCTVKLWNV 138
L S TD V LW++
Sbjct: 640 LASGSTDGRVLLWDI 654
Score = 131 (51.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 32/107 (29%), Positives = 54/107 (50%)
Query: 237 SPARKVIMRANEDCNCYSYDSRKLDEAKCV--HMGHESAVMDIDYSPTGREFVTGSYDRT 294
SP R ++ ++ED + L C+ + GH V D +SP G FV+G +DR
Sbjct: 508 SPDRNYLLSSSEDGTIRLWS---LQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRV 564
Query: 295 IRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLW 341
R++ + + I+ + V C +F +++YV +GS D +RLW
Sbjct: 565 ARLWATDHYQPLRIF-AGHLADVTCTRFHPNSNYVATGSSDRTVRLW 610
Score = 103 (41.3 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 265 CVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTK-RMQRVFCVK 321
CV + GH+ + + +SP G+ +GS D R+ ++ G I K ++ +K
Sbjct: 617 CVRIFTGHKGPIHSLAFSPNGKFLASGSTDG--RVLLWDIGHGLMIAELKGHTGTIYALK 674
Query: 322 FSCDASYVISGSDDTNLRLW 341
FS D + SGS D +RLW
Sbjct: 675 FSRDGEIIASGSIDNTVRLW 694
Score = 92 (37.4 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 27/77 (35%), Positives = 34/77 (44%)
Query: 62 LDGHRDGISCMAKNP--NYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVST 119
L GH + ++ +P NYL S S DG IRLW + + Y GH V S
Sbjct: 495 LHGHSGPVYGVSFSPDRNYL---LSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSP 551
Query: 120 DGRILVSCGTDCTVKLW 136
G VS G D +LW
Sbjct: 552 FGYYFVSGGHDRVARLW 568
Score = 91 (37.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 266 VHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCD 325
+ GH + V + P TGS DRT+R++ G I+ T + + FS +
Sbjct: 578 IFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIF-TGHKGPIHSLAFSPN 636
Query: 326 ASYVISGSDDTNLRLW 341
++ SGS D + LW
Sbjct: 637 GKFLASGSTDGRVLLW 652
Score = 54 (24.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 101 TVCQYSGHQGAVRGLTVS--TDGRILVSCG-TDCTVKLWNV 138
++C Y+ A +GLT TD L++ G D TV++W+V
Sbjct: 416 SICFYT-FLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSV 455
>TAIR|locus:2123869 [details] [associations]
symbol:EMB2757 "AT4G29860" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0009790 "embryo
development" evidence=IMP] [GO:0048700 "acquisition of desiccation
tolerance in seed" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009790 GO:GO:0080008 GO:GO:0048700 HOGENOM:HOG000007056
OMA:HEEPVMD EMBL:AB191306 IPI:IPI00537829 RefSeq:NP_194715.2
UniGene:At.31884 ProteinModelPortal:Q3MV14 SMR:Q3MV14 STRING:Q3MV14
PRIDE:Q3MV14 EnsemblPlants:AT4G29860.1 GeneID:829108
KEGG:ath:AT4G29860 TAIR:At4g29860 InParanoid:Q3MV14
PhylomeDB:Q3MV14 ProtClustDB:CLSN2680996 Genevestigator:Q3MV14
Uniprot:Q3MV14
Length = 386
Score = 107 (42.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 59 IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS 118
+ L GHR + ++ +P+ F+GS DG++R+WD R V H A L V+
Sbjct: 10 VAVLRGHRHSVMDVSFHPSKSL-LFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVA 68
Query: 119 TDGRI----LVSCGTDCTVKLWNV 138
+ ++S G D TVK W++
Sbjct: 69 ASPWLGEDKIISQGRDGTVKCWDI 92
Score = 80 (33.2 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFC--VKFSCDASYVISGSDDTNLRL 340
G+ T +D IR++ Y G + I + R C V +S D + S S+D + L
Sbjct: 320 GKIAATAGWDHRIRVYNYRKGNALAIL---KYHRATCNAVSYSPDCELMASASEDATVAL 376
Query: 341 WK 342
WK
Sbjct: 377 WK 378
>UNIPROTKB|B0W517 [details] [associations]
symbol:CPIJ001500 "Ribosome biogenesis protein WDR12
homolog" species:7176 "Culex quinquefasciatus" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 EMBL:DS231840 RefSeq:XP_001843801.1
UniGene:Cpi.10498 ProteinModelPortal:B0W517 STRING:B0W517
GeneID:6033337 KEGG:cqu:CpipJ_CPIJ001500 VectorBase:CPIJ001500
Uniprot:B0W517
Length = 425
Score = 109 (43.4 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 229 TLYDLRMSSPARKVIMRANEDCNCYSYD--SRKLDEAKCVHMGHESAVMDIDYSPTGRE- 285
+ +DL S +I+ A+ D N YD S + K ++GH V + +S T
Sbjct: 302 SFFDLSYSK-LNGLIITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWSTTNEYL 360
Query: 286 FVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
FV+G+YD ++++ Y ++ +V +S + +++SG D ++R++K+K
Sbjct: 361 FVSGAYDNHVKLWDYRSPKAPIFELIGHEDKVLACDWS-NPRFILSGGSDNSVRVFKSK 418
Score = 79 (32.9 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 65 HRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLT-VSTDGR- 122
H D +S + N++ +G D + LW + + GH V+G+T +S D
Sbjct: 107 HDDWVSAVEARDNWI---LTGCYDNTLNLWTTKGKHKLT-IPGHIAPVKGVTWISLDEEK 162
Query: 123 -ILVSCGTDCTVKLWNVPVA 141
+ S D TV LW VA
Sbjct: 163 GVFASASQDQTVMLWEWNVA 182
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 145 (56.1 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
++ +ED + +D ++ GH V D+D SP F +GS+DRT R++ ++
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNT-VLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDR 415
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
IY + V CVKF +++Y+ +GS D +RLW A+
Sbjct: 416 TYPLRIY-AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 64 GHRDGISCMAKNPN--YLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
GH + C+ +PN YL +GS D +RLW +V ++GH+G V L S +G
Sbjct: 424 GHLADVDCVKFHPNSNYLA---TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG 480
Query: 122 RILVSCGTDCTVKLWNVPVATL 143
+ L S G D +KLW++ TL
Sbjct: 481 KYLASAGEDQRLKLWDLASGTL 502
Score = 85 (35.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIY-HTKRMQRVFCVKFSCDA 326
GH V+ + +SP G+ + D+ ++++ G +E+ HT + + FS D+
Sbjct: 466 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT---DNITSLTFSPDS 522
Query: 327 SYVISGSDDTNLRLW 341
+ S S D ++R+W
Sbjct: 523 GLIASASMDNSVRVW 537
Score = 79 (32.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 23/74 (31%), Positives = 33/74 (44%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH + + +P Y F SGS D RLW + Y+GH V + +
Sbjct: 382 GHAYPVWDLDISP-YSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 124 LVSCGTDCTVKLWN 137
L + TD TV+LW+
Sbjct: 441 LATGSTDKTVRLWS 454
Score = 44 (20.5 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 9/40 (22%), Positives = 22/40 (55%)
Query: 101 TVCQYSGH--QGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
T+C Y+ + + + +S D ++L + + +KLW++
Sbjct: 258 TICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSL 297
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 147 (56.8 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 71/266 (26%), Positives = 106/266 (39%)
Query: 64 GHRDGIS--CMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
GH IS C K+ N SG+ D +RLWD+ + R++ + GH +RGLT G
Sbjct: 143 GHGGVISALCFGKHQNTWV-LASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTG 201
Query: 122 RILVSCGTDCTVKLWNVPVATLXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATA 181
L+S D TV++WN+ + E + W N Q E + TA
Sbjct: 202 SFLLSGSRDKTVQVWNIKKRS-AVRTIPVFHSVEAIG---WVNG------QPEEKILYTA 251
Query: 182 GAQ--VDIWNH---NRSQP-INSFQWGTDTVISVRFNPAEPNVLATTASDRSITLYDLRM 235
G + W+ +R P +++ T+ +I V P N L + SD S+ L R+
Sbjct: 252 GEGNLILAWDWKSGSRLDPGVDTTHSETNAIIQVV--PFSENTLLSVHSDLSLLLRK-RV 308
Query: 236 SSPARKVIMRANE------DC------------NCYSYDSRKLDEAKC--VHMGHESAVM 275
I + N DC N D D + V GH V+
Sbjct: 309 PGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTDGTQVFGVLEGHTDIVL 368
Query: 276 DIDYSPTGREFVTGSYDRTIRIFQYN 301
+D S G TG+ D T+R++ N
Sbjct: 369 TLDSSEDGVWLATGAKDNTVRLWNLN 394
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/168 (25%), Positives = 72/168 (42%)
Query: 26 HNYDPNLRPQEKAVEYVRALTAAKLEKIF---ARPFIGALDGHRDGISCMAKNPNYLKGF 82
H+ D N K + + + K K++ +G L GHR G+ + NP + +
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNP-FSRQL 522
Query: 83 FSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVAT 142
SGS D IR+W++ ++ V GH GA+ L + G +VS D VK+W++
Sbjct: 523 ASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGE 582
Query: 143 LXXXXXXXXXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQ--VDIW 188
++ WA+ +++G L + GA V +W
Sbjct: 583 CVATLDNH------------EDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 108 (43.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 35/138 (25%), Positives = 63/138 (45%)
Query: 223 ASDRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPT 282
A DR + +++S R +I A++D +DS E V GH V ++P
Sbjct: 463 AHDRDVNA--IQVSKDGR-IIASASQDKTIKLWDS-STGEVVGVLRGHRRGVWACSFNPF 518
Query: 283 GREFVTGSYDRTIRIFQYNGGRSREIY--HTKRMQRVFCVKFSCDASYVISGSDDTNLRL 340
R+ +GS DRTIRI+ + + + HT + ++ + + V+S + D +++
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYIS---QGTQVVSAAADGLVKV 575
Query: 341 WKAKASEQLGVLHPREQR 358
W + E + L E R
Sbjct: 576 WSLSSGECVATLDNHEDR 593
Score = 102 (41.0 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 169 VDHQWEGD--LFATAGAQ-VDIWNHNRSQPINSFQWGTDTVISVRFNPAEPNV-LATTAS 224
+D W GD L + + +D+ + + +Q + TD V+++ + +E V LAT A
Sbjct: 327 IDCAWIGDDHLAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTL--DSSEDGVWLATGAK 384
Query: 225 DRSITLYDLRMSSPARKVIMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGR 284
D ++ L++L + K C + V +G +D++ PT
Sbjct: 385 DNTVRLWNLNIEDNVYK----------CIHVFTGHTASVTAVALGP----LDVNGYPTF- 429
Query: 285 EFVTGSYDRTIRIF----QYNGG--RSREIYHTKRMQR-VFCVKFSCDASYVISGSDDTN 337
+ S DRT++ F Q N +R ++ K R V ++ S D + S S D
Sbjct: 430 -LASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKT 488
Query: 338 LRLWKAKASEQLGVL 352
++LW + E +GVL
Sbjct: 489 IKLWDSSTGEVVGVL 503
Score = 89 (36.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/111 (20%), Positives = 47/111 (42%)
Query: 260 LDEAKCVHM--GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRV 317
+D +CV GH A++ + Y G + V+ + D ++++ + G RV
Sbjct: 536 VDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHE-DRV 594
Query: 318 FCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHEAVKN 368
+ + D S ++SG D + +WK E + +R+ + + N
Sbjct: 595 WALASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEELERRVEAEQLLSN 645
Score = 84 (34.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/152 (16%), Positives = 66/152 (43%)
Query: 91 IRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXX 150
+ +++I + R + H+ V +T+ +L + G + VK+W++ A +
Sbjct: 85 LTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGH 144
Query: 151 XXXXEPLAVYVWKNSFWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVR 210
L +N+ W + ++V +W+ N S+ + F+ + + +
Sbjct: 145 GGVISALCFGKHQNT-WVLAS-------GADDSRVRLWDLNSSRSMAVFEGHSSVIRGLT 196
Query: 211 FNPAEPNVLATTASDRSITLYDLRMSSPARKV 242
F P + L + + D+++ +++++ S R +
Sbjct: 197 FEPTG-SFLLSGSRDKTVQVWNIKKRSAVRTI 227
Score = 83 (34.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 22/83 (26%), Positives = 37/83 (44%)
Query: 59 IGALDGHRDGISCMAKNP-NYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTV 117
I ++ H + M +P N L +G +G +++WDIA + GH G + L
Sbjct: 96 IKSMKAHETPVITMTIDPTNTLLA--TGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCF 153
Query: 118 STDGR--ILVSCGTDCTVKLWNV 138
+L S D V+LW++
Sbjct: 154 GKHQNTWVLASGADDSRVRLWDL 176
Score = 59 (25.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 107 GHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPV 140
GH V L S DG L + D TV+LWN+ +
Sbjct: 362 GHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNI 395
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 144 (55.7 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 53/202 (26%), Positives = 84/202 (41%)
Query: 36 EKAVEYVRALTAAKLEKIFARPF--IGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRL 93
E V+ A ++ + P+ + + GH + C+ P + F +G+ D I++
Sbjct: 131 ESQASLVKRTLAEQIRPEWHAPWTLMRVISGHLGWVRCVDVEPGN-QWFCTGAGDRTIKI 189
Query: 94 WDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLXXXXXXXXXX 153
WD+A+ +GH VRGL VS L SCG D VK W++ +
Sbjct: 190 WDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLS- 248
Query: 154 XEPLAVYVWKNSFWAVDHQWEGDLFATAG--AQVDIWNHNRSQPINSFQWGTDTVISVRF 211
VY K H D+ TAG A +W+ Q ++ TV S+
Sbjct: 249 ----GVYALKL------HPTL-DVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAV 297
Query: 212 NPAEPNVLATTASDRSITLYDL 233
+P V+ T + D +I L+DL
Sbjct: 298 QEFDPQVV-TGSMDSTIRLWDL 318
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 145 (56.1 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 243 IMRANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNG 302
++ +ED + +D ++ GH V D+D SP F +GS+DRT R++ ++
Sbjct: 375 LLSCSEDMSIRYWDLGSFTNT-VLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDR 433
Query: 303 GRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAK 344
IY + V CVKF +++Y+ +GS D +RLW A+
Sbjct: 434 TYPLRIY-AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 474
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 64 GHRDGISCMAKNPN--YLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDG 121
GH + C+ +PN YL +GS D +RLW +V ++GH+G V L S +G
Sbjct: 442 GHLADVDCVKFHPNSNYLA---TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG 498
Query: 122 RILVSCGTDCTVKLWNVPVATL 143
+ L S G D +KLW++ TL
Sbjct: 499 KYLASAGEDQRLKLWDLASGTL 520
Score = 89 (36.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 269 GHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRS-REIY-HTKRMQRVFCVKFSCDA 326
GH V+ + +SP G+ + D+ ++++ G +E+ HT + + FS D+
Sbjct: 484 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT---DNITSLTFSPDS 540
Query: 327 SYVISGSDDTNLRLW 341
S + S S D ++R+W
Sbjct: 541 SLIASASMDNSVRVW 555
Score = 79 (32.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 23/74 (31%), Positives = 33/74 (44%)
Query: 64 GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRI 123
GH + + +P Y F SGS D RLW + Y+GH V + +
Sbjct: 400 GHAYPVWDLDISP-YSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 458
Query: 124 LVSCGTDCTVKLWN 137
L + TD TV+LW+
Sbjct: 459 LATGSTDKTVRLWS 472
Score = 44 (20.5 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 9/40 (22%), Positives = 22/40 (55%)
Query: 101 TVCQYSGH--QGAVRGLTVSTDGRILVSCGTDCTVKLWNV 138
T+C Y+ + + + +S D ++L + + +KLW++
Sbjct: 276 TICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSL 315
WARNING: HSPs involving 553 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 434 406 0.00078 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 803
No. of states in DFA: 620 (66 KB)
Total size of DFA: 292 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.98u 0.13s 32.11t Elapsed: 00:00:02
Total cpu time: 32.05u 0.14s 32.19t Elapsed: 00:00:02
Start: Mon May 20 19:00:00 2013 End: Mon May 20 19:00:02 2013
WARNINGS ISSUED: 2