BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013875
(434 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 162/337 (48%), Gaps = 27/337 (8%)
Query: 86 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTN 145
+ V KTY +RI + L FAI H VVE D Y +PF T I I G++ +
Sbjct: 204 YIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYS 263
Query: 146 VLVQANQKPGR-YFMAARPFNDAPIPVDNKTATGILQYKGIPNSL--LPTLA--QLPASN 200
VL+ +Q P Y+++ P T G+ +PNS+ LPT Q PA +
Sbjct: 264 VLITTDQNPSENYWVSVGTRARHP-----NTPPGLTLLNYLPNSVSKLPTSPPPQTPAWD 318
Query: 201 DSEFALNYNKKLRS-LNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNI 259
D + + N+ ++ + + SPK P K +R++F + +NG A +N++
Sbjct: 319 DFDRSKNFTYRITAAMGSPKPPV----KFNRRIFLL------NTQNVINGYVKWA-INDV 367
Query: 260 SFVMPQTALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNST 319
S +P T L A +NL F P T T + +
Sbjct: 368 SLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNE-KTRIGNGVYQFKIGEV 426
Query: 320 IELVLQDTNLLT---VESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAV 376
++++LQ+ N++ E+HP+HLHG++F+V+G G G F + ++ NL +P RNT +
Sbjct: 427 VDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFS-AEEESSLNLKNPPLRNTVVI 485
Query: 377 PTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFA 413
GWTAIRF ADNPGVW HCH+E H G+ FA
Sbjct: 486 FPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFA 522
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 149/336 (44%), Gaps = 62/336 (18%)
Query: 88 MEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVL 147
+ V+SGK Y RI++ + F+I GH TV+EVD V +P T +++ I GQ +V+
Sbjct: 214 VSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVV 273
Query: 148 VQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALN 207
V+ANQ G Y++ A P N + I +Y+G +A+ S +S ALN
Sbjct: 274 VEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQGA------AVAEPTTSQNSGTALN 326
Query: 208 YNKKLRSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT 266
L L +P P + VP D L IG N T T+N F+ P
Sbjct: 327 -EANLIPLINPGAPGNPVPGGADINLNLRIGR---------NATTADFTINGAPFIPPTV 376
Query: 267 -ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQ 325
LLQ L GV GA ++ + N IE+ +
Sbjct: 377 PVLLQI----LSGVTNPNDLLPG-------GAVIS-------------LPANQVIEISIP 412
Query: 326 DTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPAN--YNLVDPIERNTAAVPTGGW-T 382
+HPFHLHG+NF D V+ P + YN V+P+ R+ ++ GG
Sbjct: 413 GGG-----NHPFHLHGHNF----------DVVRTPGSSVYNYVNPVRRDVVSIGGGGDNV 457
Query: 383 AIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418
RF DNPG WF+HCH++ H GL FA ED P
Sbjct: 458 TFRFVTDNPGPWFLHCHIDWHLEAGLAVVFA-EDIP 492
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 140/333 (42%), Gaps = 55/333 (16%)
Query: 88 MEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVL 147
+ V+ GK Y R+++ + + F+I GHN TV+EVD + ++P ++I I Q + +
Sbjct: 188 INVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFV 247
Query: 148 VQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALN 207
+ ANQ G Y++ A P N + + IL+Y+G P +A+ + +
Sbjct: 248 LNANQTVGNYWIRANP-NFGTVGFAGGINSAILRYQGAP------VAEPTTTQTTSVIPL 300
Query: 208 YNKKLRSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT 266
L L P P VD+ L F NGT +NN SF P
Sbjct: 301 IETNLHPLARMPVPGSPTPGGVDKALNLAFNF---------NGTNFF--INNASFTPPTV 349
Query: 267 -ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQ 325
LLQ +GA L A + + +STIE+ L
Sbjct: 350 PVLLQI----------------------LSGAQTAQDL--LPAGSVYPLPAHSTIEITLP 385
Query: 326 DTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGWT 382
T L HPFHLHG+ F VV + YN DPI R+ + T G
Sbjct: 386 ATALAPGAPHPFHLHGHAFAVVRSAGST--------TYNYNDPIFRDVVSTGTPAAGDNV 437
Query: 383 AIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 415
IRF+ DNPG WF+HCH++ H G FA +
Sbjct: 438 TIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAED 470
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 147/338 (43%), Gaps = 54/338 (15%)
Query: 84 DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQT 143
D + V GK Y R+++ + + F+I GH+ TV+E D+V KP T ++I I Q
Sbjct: 183 DLAVITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQR 242
Query: 144 TNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASND-S 202
+ ++ A+Q G Y++ A P N D + IL+Y G + PT +Q P++N
Sbjct: 243 YSFVLNADQDVGNYWIRALP-NSGTRNFDGGVNSAILRYDGAA-PVEPTTSQTPSTNPLV 300
Query: 203 EFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFV 262
E AL L +P PA P VD L GF G + T+N SF
Sbjct: 301 ESAL---TTLEGTAAPGSPA--PGGVDLALNMAFGFA---------GGKF--TINGASFT 344
Query: 263 MPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIE 321
P LLQ +GA L S + + + N+ IE
Sbjct: 345 PPTVPVLLQI----------------------LSGAQSAQDLLPSGS--VYSLPANADIE 380
Query: 322 LVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT-GG 380
+ L T HPFHLHG+ F VV + + YN +P+ R+ + + G
Sbjct: 381 ISLPATAAAPGFPHPFHLHGHTFAVVRSAGS--------STYNYENPVYRDVVSTGSPGD 432
Query: 381 WTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418
IRFR DNPG WF+HCH++ H G A ED P
Sbjct: 433 NVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMA-EDIP 469
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 147/334 (44%), Gaps = 57/334 (17%)
Query: 88 MEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVL 147
+ VE GK Y +R+I+ + + F+I GH T++EVD T+P T + + I GQ + +
Sbjct: 187 VNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFV 246
Query: 148 VQANQKPGRYFMAARP---FNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEF 204
+ ANQ Y++ A+P N N + IL+Y G N+ T ++N +
Sbjct: 247 LDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-----SANPNPA 301
Query: 205 ALNYNKKLRSLNSPKFPA-DVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVM 263
LN L +L P P P D L + +GF +G R T+N ++
Sbjct: 302 QLN-EADLHALIDPAAPGIPTPGAADVNLRFQLGF---------SGGRF--TINGTAYES 349
Query: 264 PQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIEL 322
P LLQ +GA L A + ++ N +EL
Sbjct: 350 PSVPTLLQI----------------------MSGAQSANDL--LPAGSVYELPRNQVVEL 385
Query: 323 VLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVP-TGGW 381
V+ L HPFHLHG+ F VV + + YN V+P++R+ ++ TG
Sbjct: 386 VVPAGVLGG--PHPFHLHGHAFSVVRS--------AGSSTYNFVNPVKRDVVSLGVTGDE 435
Query: 382 TAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 415
IRF DNPG WF HCH+E H GL FA +
Sbjct: 436 VTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAED 469
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 147/334 (44%), Gaps = 57/334 (17%)
Query: 88 MEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVL 147
+ VE GK Y +R+I+ + + F+I GH T++EVD T+P T + + I GQ + +
Sbjct: 187 VNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFV 246
Query: 148 VQANQKPGRYFMAARP---FNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEF 204
+ ANQ Y++ A+P N N + IL+Y G N+ T ++N +
Sbjct: 247 LDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-----SANPNPA 301
Query: 205 ALNYNKKLRSLNSPKFPA-DVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVM 263
LN L +L P P P D L + +GF +G R T+N ++
Sbjct: 302 QLN-EADLHALIDPAAPGIPTPGAADVNLRFQLGF---------SGGRF--TINGTAYES 349
Query: 264 PQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIEL 322
P LLQ +GA L A + ++ N +EL
Sbjct: 350 PSVPTLLQI----------------------MSGAQSANDL--LPAGSVYELPRNQVVEL 385
Query: 323 VLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVP-TGGW 381
V+ L HPFHLHG+ F VV + + YN V+P++R+ ++ TG
Sbjct: 386 VVPAGVLGG--PHPFHLHGHAFSVVRS--------AGSSTYNFVNPVKRDVVSLGVTGDE 435
Query: 382 TAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 415
IRF DNPG WF HCH+E H GL FA +
Sbjct: 436 VTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAED 469
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 146/345 (42%), Gaps = 54/345 (15%)
Query: 77 NSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAI 136
++A D + V GK Y R+++ + + F+I GH+ TV+E D+V KP T +++
Sbjct: 176 SAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSL 235
Query: 137 LIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQL 196
I Q + ++ A+Q Y++ A P N T + IL+Y G + PT +Q
Sbjct: 236 QIFAAQRYSFVLNADQDVDNYWIRALP-NSGTQNFAGGTNSAILRYDGAA-PVEPTTSQT 293
Query: 197 PASND-SEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLAT 255
P++N E AL K + SP P VD L GF + T
Sbjct: 294 PSTNPLVESALTTLKGTAAPGSP-----TPGGVDLALNMAFGFAGGNF-----------T 337
Query: 256 LNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKI 314
+N SF P LLQ +GA A L A + +
Sbjct: 338 INGASFTPPTVPVLLQI----------------------LSGAQSAADL--LPAGSVYSL 373
Query: 315 AFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTA 374
N+ IE+ L T HPFHLHG+ F VV + + YN +P+ R+
Sbjct: 374 PANADIEISLPATAAAPGFPHPFHLHGHVFAVVRSAGS--------STYNYANPVYRDVV 425
Query: 375 AVPT-GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418
+ G IRFR DNPG WF+HCH++ H G A ED P
Sbjct: 426 STGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMA-EDIP 469
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 146/345 (42%), Gaps = 54/345 (15%)
Query: 77 NSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAI 136
++A D + V GK Y R+++ + + F+I GH+ TV+E D+V KP T +++
Sbjct: 176 SAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSL 235
Query: 137 LIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQL 196
I Q + ++ A+Q Y++ A P N T + IL+Y G + PT +Q
Sbjct: 236 QIFAAQRYSFVLNADQDVDNYWIRALP-NSGTQNFAGGTNSAILRYDGAA-PVEPTTSQT 293
Query: 197 PASND-SEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLAT 255
P++N E AL K + SP P VD L GF + T
Sbjct: 294 PSTNPLVESALTTLKGTAAPGSP-----TPGGVDLALNMAFGFAGGNF-----------T 337
Query: 256 LNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKI 314
+N SF P LLQ +GA A L A + +
Sbjct: 338 INGASFTPPTVPVLLQI----------------------LSGAQSAADL--LPAGSVYSL 373
Query: 315 AFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTA 374
N+ IE+ L T HPFHLHG+ F VV + + YN +P+ R+
Sbjct: 374 PANADIEISLPATAAAPGFPHPFHLHGHVFAVVRSAGS--------STYNYANPVYRDVV 425
Query: 375 AVPT-GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418
+ G IRFR DNPG WF+HCH++ H G A ED P
Sbjct: 426 STGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMA-EDIP 469
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 151/354 (42%), Gaps = 60/354 (16%)
Query: 84 DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQT 143
D + VE K Y R+++ + + F+I GHN T++EVD V +P ++I I Q
Sbjct: 184 DLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQR 243
Query: 144 TNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSE 203
+ ++ A Q Y++ A P N I + IL+Y G + + PT A+ +
Sbjct: 244 YSFVLNATQSVDNYWIRAIP-NTGTIDTTGGLNSAILRYSGA-DIVDPT-----ANATTS 296
Query: 204 FALNYNKKLRSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFV 262
L L+SP P D V VD + F NGT +NN + +
Sbjct: 297 VIPLVETDLVPLDSPAAPGDPVVGGVDLAMNLDFSF---------NGTNFF--INNETLI 345
Query: 263 MPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIE 321
P LLQ L G A TG+ T L NSTIE
Sbjct: 346 PPTVPVLLQI----LSGAQSASDLLP-------TGSVYTLPL-------------NSTIE 381
Query: 322 LVLQDTNLLTVES-----HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAV 376
L T + V + HPFHLHG+ F VV + G+ D YN V+P+ R+T +
Sbjct: 382 LSFPITTVNGVTNAPGAPHPFHLHGHAFSVVRSA-GSSD-------YNYVNPVRRDTVST 433
Query: 377 PT-GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPT 429
G IRF DN G WF+HCH++ H G FA ED P SV P PT
Sbjct: 434 GNPGDNVTIRFTTDNAGPWFLHCHIDFHLEAGFAIVFA-EDTPD-TASVNPVPT 485
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 143/334 (42%), Gaps = 55/334 (16%)
Query: 88 MEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVL 147
+ VE GK Y +R+++ + + F+I GH+ T++E D V ++ T + I I Q + +
Sbjct: 191 ITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFV 250
Query: 148 VQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALN 207
+ ANQ G Y++ A P N D + IL+Y G + T+A +
Sbjct: 251 LNANQPVGNYWIRANP-NSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-----CL 304
Query: 208 YNKKLRSLNSPKFPADVPQK-VDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT 266
L L+ P + Q D L ++GF +C V +N +SF P
Sbjct: 305 IETDLHPLSRNGVPGNPHQGGADCNLNLSLGF---ACGNFV--------INGVSFTPPTV 353
Query: 267 -ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQ 325
LLQ +GA A L S + + + NSTIE+ L
Sbjct: 354 PVLLQI----------------------CSGANTAADLLPSGS--VISLPSNSTIEIALP 389
Query: 326 DTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVP-TGGWTAI 384
HPFHLHG++F V + +NY+ DPI R+ ++ G I
Sbjct: 390 AG--AAGGPHPFHLHGHDFAVSESA------SNSTSNYD--DPIWRDVVSIGGVGDNVTI 439
Query: 385 RFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418
RF DNPG WF+HCH++ H G FA ED P
Sbjct: 440 RFCTDNPGPWFLHCHIDWHLDAGFAIVFA-EDIP 472
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 142/337 (42%), Gaps = 58/337 (17%)
Query: 88 MEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVL 147
++V GK Y R+++ + N F+I GHN T++EVD+V ++P ++I I Q + +
Sbjct: 188 IKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFV 247
Query: 148 VQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALN 207
+ ANQ Y++ A P N + D + IL+Y G P A P +N +
Sbjct: 248 LDANQAVDNYWIRANP-NFGNVGFDGGINSAILRYDGAP-------AVEPTTNQTTSVKP 299
Query: 208 YNK-KLRSLNSPKFP-ADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQ 265
N+ L L S P A VD+ + F NG+ +N SFV P
Sbjct: 300 LNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNF---------NGSNFF--INGASFVPPT 348
Query: 266 T-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVL 324
LLQ +GA L S + + + N++IE+
Sbjct: 349 VPVLLQI----------------------LSGAQTAQDLLPSGSVYV--LPSNASIEISF 384
Query: 325 QDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGW 381
T HPFHLHG+ F VV + YN +PI R+ + T G
Sbjct: 385 PATAAAPGAPHPFHLHGHTFAVVRSAGSTV--------YNYDNPIFRDVVSTGTPAAGDN 436
Query: 382 TAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418
IRF +NPG WF+HCH++ H G A ED P
Sbjct: 437 VTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA-EDTP 472
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 141/337 (41%), Gaps = 58/337 (17%)
Query: 88 MEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVL 147
++V GK Y R+++ + N F+I GHN T++EVD+V ++P ++I I Q + +
Sbjct: 188 IKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFV 247
Query: 148 VQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALN 207
+ ANQ Y++ A P N + D + IL+Y G P A P +N +
Sbjct: 248 LDANQAVDNYWIRANP-NFGNVGFDGGINSAILRYDGAP-------AVEPTTNQTTSVKP 299
Query: 208 YNK-KLRSLNSPKFPADVPQK-VDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQ 265
N+ L L S P VD+ + F NG+ +N SFV P
Sbjct: 300 LNEVDLHPLVSTPVPGSPSSGGVDKAINMAFNF---------NGSNFF--INGASFVPPT 348
Query: 266 T-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVL 324
LLQ +GA L S + + + N++IE+
Sbjct: 349 VPVLLQI----------------------LSGAQTAQDLLPSGSVYV--LPSNASIEISF 384
Query: 325 QDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGW 381
T HPFHLHG+ F VV + YN +PI R+ + T G
Sbjct: 385 PATAAAPGAPHPFHLHGHTFAVVRSAGSTV--------YNYDNPIFRDVVSTGTPAAGDN 436
Query: 382 TAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418
IRF +NPG WF+HCH++ H G A ED P
Sbjct: 437 VTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA-EDTP 472
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 136/338 (40%), Gaps = 53/338 (15%)
Query: 84 DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQT 143
D + V GK Y R+++ + + F+I H TV+E D V T+P T ++I I Q
Sbjct: 184 DLAVISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQR 243
Query: 144 TNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSE 203
+ ++ ANQ Y++ A P N + + IL+Y P +N +
Sbjct: 244 YSFVLNANQDVDNYWIRANP-NFGTTGFADGVNSAILRYDDAD-------PVEPVTNQTG 295
Query: 204 FALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVM 263
L L L S P + P + L + F D +NG SF
Sbjct: 296 TTLLLETDLHPLTSMPVPGN-PTQGGADLNLNMAFNFDGTNFFINGE---------SFTP 345
Query: 264 PQTALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELV 323
P +L L+ + +GA L S + + + NS+IE+
Sbjct: 346 PTVPVL------LQII---------------SGANTAQDLLPSGS--VYSLPSNSSIEIT 382
Query: 324 LQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GG 380
T HPFHLHG+ F VV + +YN DP+ R+ + T G
Sbjct: 383 FPATTAAPGAPHPFHLHGHVFAVVRSAGS--------TSYNYDDPVWRDVVSTGTPQAGD 434
Query: 381 WTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418
IRF+ DNPG WF+HCH++ H G A ED P
Sbjct: 435 NVTIRFQTDNPGPWFLHCHIDFHLDAGFAVVMA-EDIP 471
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 136/336 (40%), Gaps = 53/336 (15%)
Query: 84 DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQT 143
D + V +GK Y R+++ + + F+I GH T+++VD++ +P I I Q
Sbjct: 184 DLAVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQR 243
Query: 144 TNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSE 203
+ ++ ANQ Y++ A P N + N + IL+Y G + PT +Q + +
Sbjct: 244 YSFILNANQAVNNYWIRANP-NQGNVGFTNGINSAILRYSGAA-ATQPTTSQTSSVQPLD 301
Query: 204 FALNYNKKLRSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFV 262
L L + P V V+ + F NGT ++ SFV
Sbjct: 302 -----QTNLHPLTATAVPGSPVAGGVNLAINQAFNF---------NGTNHF--VDGASFV 345
Query: 263 MPQTALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIEL 322
P +L +GA A L S + + ++ IE+
Sbjct: 346 PPTVPVLSQIV---------------------SGAQSAADLLASG--LVYSLPSDANIEI 382
Query: 323 VLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGW- 381
T+ HPFHLHG+ F VV + YN DPI R+T + T
Sbjct: 383 SFPATSAAAGGPHPFHLHGHAFAVVRSAGS--------TTYNYNDPIFRDTVSTGTPAAN 434
Query: 382 --TAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 415
IRF+ +NPG WF+HCH++ H G FA +
Sbjct: 435 DNVTIRFKTNNPGPWFLHCHIDFHLEAGFAVVFAQD 470
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 129/329 (39%), Gaps = 55/329 (16%)
Query: 89 EVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLV 148
EV+ TYLLRI+N +F I H TVVE+D + T+ T+ + I Q VLV
Sbjct: 181 EVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLV 240
Query: 149 QANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNY 208
+ F + F+D + V LQ + A LP N + N+
Sbjct: 241 HTKNDTDKNFAIMQKFDDTMLDV----IPSDLQLNATSYMVYNKTAALPTQNYVDSIDNF 296
Query: 209 NKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTAL 268
P + + D + T+ D+ VN A NNI++ P+
Sbjct: 297 LDDFYL--QPYEKEAIYGEPDHVI--TVDVVMDNLKNGVN----YAFFNNITYTAPKVPT 348
Query: 269 LQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVL--QD 326
L V + G S T + + +E+VL QD
Sbjct: 349 LMT-------VLSS-------------GDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD 388
Query: 327 TNLLTVESHPFHLHGYNFFVV----------GTGIGNFDPVKYPA--NYNLVDPIERNTA 374
T +HPFHLHG+ F + G +FDP +PA Y P+ R+T
Sbjct: 389 TG-----THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEY----PMRRDTL 439
Query: 375 AVPTGGWTAIRFRADNPGVWFMHCHLELH 403
V IRF+ADNPGVWF HCH+E H
Sbjct: 440 YVRPQSNFVIRFKADNPGVWFFHCHIEWH 468
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 141/341 (41%), Gaps = 60/341 (17%)
Query: 84 DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQT 143
D ++V GK Y R+++ + + F+I H T++E D++ T+P ++I I Q
Sbjct: 184 DLAVIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQR 243
Query: 144 TNVLVQANQKPGRYFMAARP-FNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDS 202
+ ++ A+Q Y++ A P F + + IL+Y G P ++ P +
Sbjct: 244 YSFVLDASQPVDNYWIRANPAFGNTGFA--GGINSAILRYDGAPEIEPTSVQTTPTKPLN 301
Query: 203 EFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFV 262
E L+ + SP+ P VD+ L F NGT +N+ +FV
Sbjct: 302 EVDLHPLSPMPVPGSPE-----PGGVDKPLNLVFNF---------NGTNFF--INDHTFV 345
Query: 263 MPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIE 321
P LLQ +GA L + + + NS+IE
Sbjct: 346 PPSVPVLLQI----------------------LSGAQAAQDLVPEGSVFV--LPSNSSIE 381
Query: 322 LVLQDTNLLTVESHPFHLHGYNFFVV---GTGIGNFDPVKYPANYNLVDPIERNTAAVPT 378
+ T HPFHLHG+ F VV G+ + N+D +PI R+ +
Sbjct: 382 ISFPATANAPGFPHPFHLHGHAFAVVRSAGSSVYNYD-----------NPIFRDVVSTGQ 430
Query: 379 -GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418
G IRF +NPG WF+HCH++ H G A ED P
Sbjct: 431 PGDNVTIRFETNNPGPWFLHCHIDFHLDAGFAVVMA-EDTP 470
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 143/340 (42%), Gaps = 64/340 (18%)
Query: 88 MEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVL 147
++V GK R+++ + + F+I GHN T++EVD+ ++P + ++I I Q + +
Sbjct: 188 IKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFV 247
Query: 148 VQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALN 207
+ ANQ Y++ A P N + + + IL+Y G P A P +N +
Sbjct: 248 LNANQAVDNYWIRANP-NFGNVGFNGGINSAILRYDGAP-------AVEPTTNQTTSVKP 299
Query: 208 YNK-KLRSLNSPKFPADVPQK-VDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQ 265
N+ L L S P VD+ + F NG+ +N SFV P
Sbjct: 300 LNEVNLHPLVSTPVPGSPSSGGVDKAINMAFNF---------NGSNFF--INGASFVPPS 348
Query: 266 T-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVL 324
LLQ +GA L S + + + N++IE+
Sbjct: 349 VPVLLQI----------------------LSGAQTAQDLLPSGSVXV--LPSNASIEISF 384
Query: 325 QDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGW 381
T HPFHLHG+ F VV + YN +PI R+ + T G
Sbjct: 385 PATAAAPGAPHPFHLHGHTFAVVRSAGSTV--------YNYSNPIFRDVVSTGTPAAGDN 436
Query: 382 TAIRFRADNPGVWFMHCHLELHTGWGLKTAFAV---EDGP 418
IRF +NPG WF+HCH++ H L+ FAV ED P
Sbjct: 437 VTIRFLTNNPGPWFLHCHIDFH----LEGGFAVVQAEDVP 472
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 137/341 (40%), Gaps = 58/341 (17%)
Query: 84 DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQT 143
D + V GK Y R+++ + + F+I GHN T++E D++ T P ++I I Q
Sbjct: 184 DLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQR 243
Query: 144 TNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSE 203
+ +++ANQ Y++ A P N + + IL+Y G A P + +
Sbjct: 244 YSFVLEANQAVDNYWIRANP-NFGNVGFTGGINSAILRYDG-------AAAVEPTTTQTT 295
Query: 204 FALNYNK-KLRSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISF 261
N+ L L + P V VD + F NGT +N SF
Sbjct: 296 STAPLNEVNLHPLVATAVPGSPVAGGVDLAINMAFNF---------NGTNFF--INGASF 344
Query: 262 VMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTI 320
P LLQ +GA L S + + + N+ I
Sbjct: 345 TPPTVPVLLQI----------------------ISGAQNAQDLLPSGS--VYSLPSNADI 380
Query: 321 ELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT-- 378
E+ T HPFHLHG+ F VV + YN +PI R+ + T
Sbjct: 381 EISFPATAAAPGAPHPFHLHGHAFAVVRSAGSTV--------YNYDNPIFRDVVSTGTPA 432
Query: 379 -GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418
G IRFR DNPG WF+HCH++ H G FA ED P
Sbjct: 433 AGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVFA-EDIP 472
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 140/340 (41%), Gaps = 64/340 (18%)
Query: 88 MEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVL 147
+ V GK R+++ + + F+I GHN T++E D+V ++P T++I I Q +
Sbjct: 188 VSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFT 247
Query: 148 VQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALN 207
+ ANQ Y++ A P N + + + IL+Y G P A P +N S
Sbjct: 248 LNANQAVDNYWIRANP-NFGNVGFNGGINSAILRYDGAP-------AVEPTTNQSTSTQP 299
Query: 208 YNK-KLRSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQ 265
N+ L L S P VD+ + F NG+ +N SF P
Sbjct: 300 LNETNLHPLVSTPVPGSPAAGGVDKAINMAFNF---------NGSNFF--INGASFTPPS 348
Query: 266 T-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVL 324
LLQ +GA L S + + + N++IE+
Sbjct: 349 VPVLLQI----------------------LSGAQTAQDLLPSGS--VXTLPSNASIEISF 384
Query: 325 QDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGW 381
T HPFHLHG+ F VV + YN +PI R+ + T G
Sbjct: 385 PATAAAPGAPHPFHLHGHVFAVVRSAGSTV--------YNYSNPIFRDVVSTGTPAAGDN 436
Query: 382 TAIRFRADNPGVWFMHCHLELHTGWGLKTAFAV---EDGP 418
IRF +NPG WF+HCH++ H L+ FAV ED P
Sbjct: 437 VTIRFLTNNPGPWFLHCHIDFH----LEGGFAVVQAEDVP 472
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 335 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVW 394
HP HLHG++FF+V F+ + PA +NLV+P R+ AA+P G+ AI F+ DNPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 395 FMHCHLELHTGWGLKTAF 412
+HCH+ H GL F
Sbjct: 523 LLHCHIAWHASEGLAMQF 540
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%)
Query: 86 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTN 145
F + G Y LR+IN ++ FAI H TV+ D V P+TT+ +LI GQ +
Sbjct: 253 FELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYD 312
Query: 146 VLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYK 183
V+V+AN Y++ + ATGIL+Y
Sbjct: 313 VIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYD 350
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%)
Query: 335 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVW 394
HP HLHG++FF+V F+ + PA +NLV+P R+ AA+P G+ AI F+ DNPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 395 FMHCHLELHTGWGLKTAF 412
+HCH+ H G+ F
Sbjct: 523 LLHCHIAWHASEGMAMQF 540
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%)
Query: 86 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTN 145
F + G Y LR+IN ++ FAI H TV+ D V P+TT+ +LI GQ +
Sbjct: 253 FELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYD 312
Query: 146 VLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYK 183
V+V+AN Y++ + ATGIL+Y
Sbjct: 313 VIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYD 350
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 319 TIELVLQD-TNLLTVESHPFHLHGYNFFVVG--------TGIGN-FDPVKYPANYNLVDP 368
T L+ D TN + HP HLHG++F V+G G+ + FDP K +P
Sbjct: 455 TYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNP 514
Query: 369 IERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAF 412
+ R+ +P GGW + F+ DNPG W HCH+ H GL F
Sbjct: 515 VRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDF 558
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 86 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTN 145
+ + + GK + LRIIN + ++ ++ GHN TV+ D V FT ++ +A GQ +
Sbjct: 256 YNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYD 315
Query: 146 VLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASN 200
V + AN G Y+ + +NK I +Y+G P + LPT LP N
Sbjct: 316 VTIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQGAP-ATLPTDQGLPVPN 369
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 335 HPFHLHGYNFFVVGTGIGN---------FDPVKYPANYNLVDPIERNTAAVPTGGWTAIR 385
HP HLHG++F V+G FDP A N +P R+T +P GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 386 FRADNPGVWFMHCHLELHTGWGLKTAF 412
FR DNPG W HCH+ H GL F
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDF 517
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 93 GKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ 152
GK + LRI+N + + ++ H TV+ D V T +++ +A GQ +V++ A++
Sbjct: 222 GKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASR 281
Query: 153 KPGRYF 158
P Y+
Sbjct: 282 APDNYW 287
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 335 HPFHLHGYNFFVVGTGIGN---------FDPVKYPANYNLVDPIERNTAAVPTGGWTAIR 385
HP HLHG++F V+G FDP A N +P R+T +P GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 386 FRADNPGVWFMHCHLELHTGWGLKTAF 412
FR DNPG W HCH+ H GL F
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDF 517
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 93 GKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ 152
GK + LRI+N + + ++ H TV+ D V T +++ +A GQ +V++ A++
Sbjct: 222 GKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASR 281
Query: 153 KPGRYF 158
P Y+
Sbjct: 282 APDNYW 287
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 335 HPFHLHGYNFFVVGTGIGN---------FDPVKYPANYNLVDPIERNTAAVPTGGWTAIR 385
HP HLHG++F V+G FDP A N +P R+T +P GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 386 FRADNPGVWFMHCHLELHTGWGLKTAF 412
FR DNPG W HCH+ H GL F
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDF 517
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 93 GKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ 152
GK + LRI+N + + ++ H TV+ D V T +++ +A GQ +V++ A++
Sbjct: 222 GKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASR 281
Query: 153 KPGRYF 158
P Y+
Sbjct: 282 APDNYW 287
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 90 VESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVY-TKPFTTEAILIAPGQTTNVLV 148
V T LR++NA+ A+ H ++ D + +P +L+APG+ VLV
Sbjct: 191 VAQKATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLV 250
Query: 149 QANQKPGRYFMAARPFN 165
+ +K GR+ + A P++
Sbjct: 251 RL-RKEGRFLLQALPYD 266
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 335 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 392
H FHLHG+ + TG+ +DP L+D + N + G+ I PG
Sbjct: 212 HTFHLHGHRWLDNRTGMRTSEYDPSP------LIDIKDLNPGV--SFGFQVIAGEGVGPG 263
Query: 393 VWFMHCHLELHTGWGLKTAFAVEDGPG 419
+W HCH++ H+ G+ F V + G
Sbjct: 264 MWMYHCHVQNHSDMGMAGMFLVRNADG 290
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 334 SHPFHLHGYNFFVVGTGI-GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 392
HPFH+HG F ++ + + G ++ A R+T V +R + D G
Sbjct: 406 DHPFHIHGTQFELISSKLNGKVQKAEFRA--------LRDTINVRPNEELRLRMKQDFKG 457
Query: 393 VWFMHCHLELHTGWGLKTAFAVED 416
+ HCH+ H G+ V++
Sbjct: 458 LRMYHCHILEHEDLGMMGNLEVKE 481
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 19/84 (22%)
Query: 332 VESHPFHLHGYNFFVVGTGIGNFDPVK-YPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390
++ H H HG++F G+ + D +P Y ++ R
Sbjct: 991 IDLHTVHFHGHSFQYKHRGVYSSDVFDIFPGTYQTLEMFPRT------------------ 1032
Query: 391 PGVWFMHCHLELHTGWGLKTAFAV 414
PG+W +HCH+ H G++T + V
Sbjct: 1033 PGIWLLHCHVTDHIHAGMETTYTV 1056
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 19/84 (22%)
Query: 332 VESHPFHLHGYNFFVVGTGIGNFDPVK-YPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390
++ H H HG++F G+ + D +P Y ++ R
Sbjct: 972 IDLHTVHFHGHSFQYKHRGVYSSDVFDIFPGTYQTLEMFPRT------------------ 1013
Query: 391 PGVWFMHCHLELHTGWGLKTAFAV 414
PG+W +HCH+ H G++T + V
Sbjct: 1014 PGIWLLHCHVTDHIHAGMETTYTV 1037
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 116/335 (34%), Gaps = 63/335 (18%)
Query: 98 LRIINAALNDELFFAIAGHN--FTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ-KP 154
LR++N L FA + + + + + +P + + G+ VLV+ N KP
Sbjct: 205 LRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 155 --------GRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSL--LPTLAQLPASNDSEF 204
+ MA PF D P PV I +P++L LP L L +
Sbjct: 265 FDLVTLPVSQMGMAIAPF-DKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKL 323
Query: 205 ALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMP 264
L+ + L S S Q + K G + +A +++ S +M
Sbjct: 324 QLSMDPSLDSSGS--------QSLSEKY----------------GDQAMAGMDH-SQMMG 358
Query: 265 QTALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVL 324
++ N G F P+ A+ + + + +++L
Sbjct: 359 HMGHGNMNHMNHGGKFDFHHANKINGQAFDMNKPMFAA----AKGQYERWVISGVGDMML 414
Query: 325 QDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAI 384
HPFH+HG F ++ P + A + +E N + V +
Sbjct: 415 ----------HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LV 456
Query: 385 RFRADNPG--VWFMHCHLELHTGWGLKTAFAVEDG 417
+F D P + HCHL H G+ F V G
Sbjct: 457 KFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTVLQG 491
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
Query: 335 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 392
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 393 VWFMHCHLELHTGWGLKTAFAVEDG 417
+ HCHL H G+ F V G
Sbjct: 467 AYMAHCHLLEHEDTGMMLGFTVLQG 491
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
Query: 335 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 392
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 393 VWFMHCHLELHTGWGLKTAFAVEDG 417
+ HCHL H G+ F V G
Sbjct: 467 AYMAHCHLLEHDDTGMMLGFTVLQG 491
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 335 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 392
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 367 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 418
Query: 393 VWFMHCHLELHTGWGLKTAFAV 414
+ HCHL H G+ F V
Sbjct: 419 AYMAHCHLLEHEDTGMMLGFTV 440
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 335 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 392
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 393 VWFMHCHLELHTGWGLKTAFAV 414
+ HCHL H G+ F V
Sbjct: 467 AYMAHCHLLEHEDTGMMLGFTV 488
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 335 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 392
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 393 VWFMHCHLELHTGWGLKTAFAV 414
+ HCHL H G+ F V
Sbjct: 467 AYMAHCHLLEHEDTGMMLGFTV 488
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 352 GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHT 404
G+ + + + L PI+ +T + G + DNPG+W +H H++ HT
Sbjct: 206 GHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHT 258
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 335 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 392
H FH+HG+ + TGI G DP + N + T + G+ I G
Sbjct: 193 HTFHMHGHRWADNRTGILTGPDDPSRVIDN--------KITGPADSFGFQIIAGEGVGAG 244
Query: 393 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 424
W HCH++ H+ G+ F V+ PD ++
Sbjct: 245 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 273
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 335 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 392
H FH+HG+ + TGI G DP + N + T + G+ I G
Sbjct: 194 HTFHMHGHRWADNRTGILTGPDDPSRVIDN--------KITGPADSFGFQIIAGEGVGAG 245
Query: 393 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 424
W HCH++ H+ G+ F V+ PD ++
Sbjct: 246 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 274
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 335 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 392
H FH+HG+ + TGI G DP + N + T + G+ I G
Sbjct: 231 HTFHMHGHRWADNRTGILTGPDDPSRVIDN--------KITGPADSFGFQIIAGEGVGAG 282
Query: 393 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 424
W HCH++ H+ G+ F V+ PD ++
Sbjct: 283 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 311
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 335 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 392
H FH+HG+ + TGI G DP + N + T + G+ I G
Sbjct: 190 HTFHMHGHRWADNRTGILTGPDDPSRVIDN--------KITGPADSFGFQIIAGEGVGAG 241
Query: 393 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 424
W HCH++ H+ G+ F V+ PD ++
Sbjct: 242 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 270
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From
Streptomyces Venezueale In Complex With D-glucose.
pdb|4I3G|B Chain B, Crystal Structure Of Desr, A Beta-glucosidase From
Streptomyces Venezueale In Complex With D-glucose
Length = 829
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 164 FNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSE---FALNYNKKLRSLNSPKF 220
F++ P+ V ++TA + Q KGI + L T A+ A+N+ E F++N N ++L +F
Sbjct: 168 FSEDPL-VSSRTA--VAQIKGIQGAGLMTTAKHFAANNQENNRFSVNANVDEQTLREIEF 224
Query: 221 PA-DVPQKVDRKLFYTIGFGKDSCPTCVN 248
PA + K F G + P+C N
Sbjct: 225 PAFEASSKAGAASFMCAYNGLNGKPSCGN 253
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 21/116 (18%)
Query: 311 LSKIAFNSTIELVLQDTNLLTVE-----------SHPFHLHGYNFFVVGTGIGNFDPVKY 359
++ +AF +L + + TVE +HP H+H +F V+ GN
Sbjct: 363 INGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVM 422
Query: 360 PANYNLVDPI---ERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAF 412
P L D + R T V A PGV+ HCH +H + AF
Sbjct: 423 PYESGLKDVVWLGRRETVVVEA-------HYAPFPGVYMFHCHNLIHEDHDMMAAF 471
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 335 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 392
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 393 VWFMHCHLELHTGWGLKTAFAVEDG 417
+ H HL H G+ F V G
Sbjct: 467 AYMAHSHLLEHEDTGMMLGFTVLQG 491
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 335 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 392
H FHLHG+ + TG+ G DP + N + P + + G+ I G
Sbjct: 196 HTFHLHGHRWADNRTGMLTGPDDPSQVIDN-KICGPAD-------SFGFQVIAGEGVGAG 247
Query: 393 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 424
W HCH++ H+ G+ F V+ PD ++
Sbjct: 248 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 276
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 335 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 392
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 393 VWFMHCHLELHTGWGLKTAFAV 414
+ H HL H G+ F V
Sbjct: 467 AYMAHSHLLEHQDTGMMLGFTV 488
>pdb|1UN2|A Chain A, Crystal Structure Of Circularly Permuted Cpdsba_q100t99
Preserved Global Fold And Local Structural Adjustments
Length = 197
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 16/150 (10%)
Query: 145 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQL-----PAS 199
+V + A K Y A F + + A +Q +G+P + QL S
Sbjct: 11 DVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLNPQGMDTS 70
Query: 200 NDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIG-----------FGKDSCPTCVN 248
N F Y ++ L+ K Q D K + T+ F CP C
Sbjct: 71 NMDVFVQQYADTVKYLSEKKGGGTGAQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQ 130
Query: 249 GTRLLATLNNISFVMPQTALLQAHYFNLKG 278
+L +N+ +P+ + ++ N G
Sbjct: 131 FEEVLHISDNVKKKLPEGVKMTKYHVNFMG 160
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,603,404
Number of Sequences: 62578
Number of extensions: 518462
Number of successful extensions: 1138
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1015
Number of HSP's gapped (non-prelim): 103
length of query: 434
length of database: 14,973,337
effective HSP length: 102
effective length of query: 332
effective length of database: 8,590,381
effective search space: 2852006492
effective search space used: 2852006492
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)