Query 013875
Match_columns 434
No_of_seqs 194 out of 1885
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 18:44:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 9.8E-76 3.3E-80 613.7 39.0 409 2-434 93-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.2E-70 4.2E-75 571.9 36.4 367 2-418 157-546 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 2.9E-69 9.8E-74 555.1 30.9 361 2-417 97-472 (499)
4 1zpu_A Iron transport multicop 100.0 2.7E-69 9.2E-74 561.4 30.4 366 2-417 93-482 (534)
5 3t6v_A Laccase; beta barrel, o 100.0 1.8E-68 6.2E-73 549.1 35.7 358 2-416 98-471 (495)
6 1v10_A Laccase; multicopper bl 100.0 7E-69 2.4E-73 557.5 29.9 372 2-434 118-508 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 7.7E-69 2.6E-73 555.3 27.9 375 2-434 97-487 (503)
8 2q9o_A Laccase-1; multicopper 100.0 1E-67 3.5E-72 552.8 28.7 372 2-418 127-523 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 4.7E-62 1.6E-66 496.9 28.6 307 5-415 104-439 (439)
10 3abg_A Bilirubin oxidase; clea 100.0 1.3E-60 4.3E-65 495.5 29.2 328 2-418 122-477 (534)
11 2wsd_A Spore coat protein A; o 100.0 1.2E-59 4E-64 487.7 28.0 333 2-417 141-511 (513)
12 3aw5_A Multicopper oxidase; be 100.0 5.1E-60 1.7E-64 482.1 24.3 315 2-415 91-448 (448)
13 2uxt_A Protein SUFI, SUFI; oxi 100.0 5.7E-60 2E-64 482.4 22.7 312 2-418 103-443 (451)
14 3zx1_A Oxidoreductase, putativ 100.0 1.9E-57 6.4E-62 464.5 27.4 320 2-415 135-480 (481)
15 3gyr_A PHS, phenoxazinone synt 100.0 8.6E-58 3E-62 485.2 24.5 364 2-419 159-594 (612)
16 2g23_A PHS, phenoxazinone synt 100.0 2.4E-55 8.3E-60 459.6 32.4 340 2-418 159-593 (612)
17 3od3_A Blue copper oxidase CUE 100.0 8.3E-56 2.9E-60 452.2 24.9 327 2-414 101-488 (488)
18 2dv6_A Nitrite reductase; elec 100.0 2.8E-38 9.7E-43 323.0 14.1 317 2-419 102-436 (447)
19 2r7e_A Coagulation factor VIII 100.0 8.8E-34 3E-38 303.9 10.6 86 312-418 628-713 (742)
20 2j5w_A Ceruloplasmin, ferroxid 100.0 1.4E-31 4.8E-36 297.8 14.0 93 309-419 969-1061(1065)
21 2j5w_A Ceruloplasmin, ferroxid 100.0 7.7E-31 2.6E-35 291.9 16.9 164 7-187 174-359 (1065)
22 3cg8_A Laccase; oxidoreductase 100.0 2.2E-29 7.5E-34 247.6 18.0 220 77-418 71-308 (343)
23 3gdc_A Multicopper oxidase; be 100.0 4.6E-29 1.6E-33 239.9 18.2 233 72-416 55-288 (288)
24 2zwn_A Two-domain type laccase 100.0 4.3E-29 1.5E-33 245.5 16.5 241 72-418 24-279 (339)
25 3g5w_A Multicopper oxidase typ 100.0 1.7E-28 5.9E-33 238.8 14.4 243 72-418 23-278 (318)
26 3kw8_A Laccase, putative coppe 100.0 2.1E-27 7E-32 227.0 18.6 225 75-419 28-268 (276)
27 3tas_A Small laccase, multi-co 99.9 2.3E-26 8E-31 223.5 21.0 218 85-419 41-274 (313)
28 3t9w_A Small laccase, multi-co 99.9 3.4E-26 1.2E-30 220.7 21.6 223 77-419 52-290 (299)
29 1kbv_A ANIA, major outer membr 99.9 2.1E-27 7E-32 232.4 7.8 171 2-187 123-310 (327)
30 3g5w_A Multicopper oxidase typ 99.9 7.2E-26 2.5E-30 220.3 13.8 178 2-186 92-278 (318)
31 2zwn_A Two-domain type laccase 99.9 3.5E-25 1.2E-29 217.6 15.8 176 2-186 93-279 (339)
32 1sdd_A Coagulation factor V; c 99.9 1.3E-25 4.4E-30 217.7 1.8 237 74-417 52-301 (306)
33 1sdd_B Coagulation factor V; c 99.9 7.8E-23 2.7E-27 217.6 18.6 247 85-419 68-330 (647)
34 2zoo_A Probable nitrite reduct 99.9 3.4E-24 1.2E-28 218.3 7.3 171 2-187 113-300 (442)
35 2bw4_A Copper-containing nitri 99.9 3.4E-21 1.2E-25 189.5 21.8 243 71-418 59-326 (340)
36 1mzy_A Copper-containing nitri 99.9 2.5E-22 8.7E-27 197.0 10.1 174 2-187 117-321 (333)
37 1kbv_A ANIA, major outer membr 99.9 8.5E-21 2.9E-25 185.5 20.2 249 72-418 59-309 (327)
38 1oe1_A Dissimilatory copper-co 99.9 3.3E-22 1.1E-26 196.4 7.8 172 2-188 118-322 (336)
39 2bw4_A Copper-containing nitri 99.9 6.5E-22 2.2E-26 194.6 9.1 172 2-187 124-327 (340)
40 2r7e_B Coagulation factor VIII 99.8 1.4E-22 4.7E-27 217.6 3.1 88 311-416 369-456 (770)
41 2dv6_A Nitrite reductase; elec 99.8 5E-21 1.7E-25 195.3 13.2 169 2-186 248-435 (447)
42 3gdc_A Multicopper oxidase; be 99.8 1.6E-21 5.3E-26 187.3 8.2 146 2-162 121-271 (288)
43 1mzy_A Copper-containing nitri 99.8 7.3E-19 2.5E-23 172.3 23.5 93 311-418 226-320 (333)
44 2r7e_A Coagulation factor VIII 99.8 3.8E-21 1.3E-25 206.1 1.9 86 311-417 245-330 (742)
45 3tas_A Small laccase, multi-co 99.8 5.7E-20 1.9E-24 178.5 9.1 134 2-162 110-254 (313)
46 1oe1_A Dissimilatory copper-co 99.8 9.7E-18 3.3E-22 164.5 24.0 255 72-432 54-335 (336)
47 1sdd_A Coagulation factor V; c 99.8 4E-21 1.4E-25 186.1 -1.9 140 7-163 139-284 (306)
48 2zoo_A Probable nitrite reduct 99.8 3.4E-18 1.2E-22 174.0 19.1 249 72-418 49-299 (442)
49 1sdd_B Coagulation factor V; c 99.8 1.3E-19 4.6E-24 192.7 7.5 144 7-163 144-311 (647)
50 3t9w_A Small laccase, multi-co 99.7 1.5E-18 5.1E-23 167.3 8.8 134 5-162 129-270 (299)
51 3kw8_A Laccase, putative coppe 99.7 1.7E-18 5.8E-23 165.2 7.6 130 6-163 108-249 (276)
52 2r7e_B Coagulation factor VIII 99.7 1.3E-18 4.6E-23 186.8 3.4 146 6-162 269-439 (770)
53 3cg8_A Laccase; oxidoreductase 99.6 1.3E-16 4.6E-21 156.5 8.2 146 6-184 149-306 (343)
54 2aan_A Auracyanin A; cupredoxi 99.3 5.9E-12 2E-16 107.2 6.5 94 311-415 36-139 (139)
55 3cvb_A Plastocyanin; cupredoxi 99.2 2.9E-11 1E-15 97.5 7.9 85 310-415 19-104 (105)
56 2xu9_A Laccase; oxidoreductase 99.2 8.5E-11 2.9E-15 119.1 12.7 230 72-402 36-266 (439)
57 1aoz_A Ascorbate oxidase; oxid 99.1 4.7E-09 1.6E-13 109.4 18.7 259 72-402 23-284 (552)
58 2uxt_A Protein SUFI, SUFI; oxi 99.1 6.9E-10 2.3E-14 112.7 11.8 226 71-402 38-272 (451)
59 3pxl_A Laccase; 4-copper prote 99.0 1.1E-08 3.8E-13 104.9 18.7 235 72-400 23-263 (499)
60 3t6v_A Laccase; beta barrel, o 99.0 7.3E-09 2.5E-13 106.2 16.5 237 72-400 24-266 (495)
61 1v10_A Laccase; multicopper bl 99.0 5.8E-09 2E-13 107.8 15.3 242 71-401 43-290 (521)
62 2gim_A Plastocyanin; beta shee 98.9 2.8E-09 9.7E-14 85.9 8.5 84 311-415 21-105 (106)
63 3sqr_A Laccase; multicopper ox 98.9 5.5E-08 1.9E-12 101.2 19.4 242 72-400 87-330 (580)
64 1hfu_A Laccase 1; oxidoreducta 98.9 4.1E-08 1.4E-12 101.0 18.3 233 72-401 24-263 (503)
65 2q9o_A Laccase-1; multicopper 98.8 4.8E-08 1.6E-12 101.8 16.6 234 72-400 56-292 (559)
66 1qhq_A Protein (auracyanin); e 98.8 6.7E-09 2.3E-13 88.2 8.3 98 311-415 34-139 (140)
67 1zpu_A Iron transport multicop 98.8 1.1E-07 3.7E-12 98.5 17.5 218 72-400 23-256 (534)
68 1pcs_A Plastocyanin; electron 98.7 9E-09 3.1E-13 81.7 4.7 79 311-415 20-98 (98)
69 2plt_A Plastocyanin; electron 98.7 1.8E-08 6E-13 79.9 5.9 80 311-415 19-98 (98)
70 1bxv_A Plastocyanin; copper pr 98.6 6.4E-08 2.2E-12 75.5 7.4 72 311-415 20-91 (91)
71 1b3i_A PETE protein, protein ( 98.6 2.7E-08 9.1E-13 78.8 4.0 78 311-415 20-97 (97)
72 3od3_A Blue copper oxidase CUE 98.5 2.7E-07 9.2E-12 94.1 10.1 88 73-161 379-472 (488)
73 1iby_A Nitrosocyanin; RED copp 98.5 4.2E-07 1.4E-11 73.8 8.5 74 311-416 39-112 (112)
74 3zx1_A Oxidoreductase, putativ 98.5 7.1E-07 2.4E-11 90.9 11.9 88 73-162 372-464 (481)
75 4hci_A Cupredoxin 1; structura 98.5 4.9E-07 1.7E-11 71.9 8.4 71 312-415 30-100 (100)
76 1byp_A Protein (plastocyanin); 98.5 4.8E-07 1.6E-11 71.7 8.1 82 311-415 18-99 (99)
77 1kdj_A Plastocyanin; electron 98.4 6.4E-07 2.2E-11 71.4 7.4 85 311-415 18-102 (102)
78 2g23_A PHS, phenoxazinone synt 98.3 3E-06 1E-10 88.7 11.0 88 73-162 460-574 (612)
79 2cal_A Rusticyanin; iron respi 98.2 4.2E-06 1.4E-10 71.9 7.9 85 310-415 61-154 (154)
80 1plc_A Plastocyanin; electron 98.1 2.9E-06 1E-10 67.1 6.1 82 311-415 18-99 (99)
81 3aw5_A Multicopper oxidase; be 98.1 6.1E-06 2.1E-10 83.5 9.1 87 310-419 38-129 (448)
82 3abg_A Bilirubin oxidase; clea 98.1 1E-05 3.5E-10 83.6 9.6 88 309-419 68-160 (534)
83 1fwx_A Nitrous oxide reductase 98.0 1.6E-05 5.5E-10 82.2 10.1 78 310-417 513-593 (595)
84 2ov0_A Amicyanin; beta-sandwic 98.0 2E-05 6.7E-10 63.1 7.9 72 311-415 34-105 (105)
85 2wsd_A Spore coat protein A; o 97.9 2.8E-05 9.5E-10 80.1 9.7 88 73-162 385-493 (513)
86 3gyr_A PHS, phenoxazinone synt 97.5 0.00034 1.2E-08 73.4 11.2 89 72-162 459-574 (612)
87 2aan_A Auracyanin A; cupredoxi 97.3 0.00062 2.1E-08 57.1 8.2 79 73-161 20-123 (139)
88 1iuz_A Plastocyanin; electron 97.3 0.00081 2.8E-08 52.7 8.1 80 311-415 19-98 (98)
89 3tu6_A Pseudoazurin (blue copp 97.3 0.00046 1.6E-08 57.0 6.6 75 311-418 24-98 (127)
90 3erx_A Pseudoazurin; copper pr 97.3 0.00087 3E-08 55.0 8.1 74 311-417 22-95 (123)
91 1id2_A Amicyanin; beta barrel, 97.2 0.0011 3.7E-08 52.9 7.9 72 311-415 35-106 (106)
92 3ef4_A Pseudoazurin, blue copp 97.2 0.00088 3E-08 55.0 7.0 74 311-417 23-96 (124)
93 3c75_A Amicyanin; copper prote 97.1 0.0016 5.5E-08 54.1 7.9 72 311-415 61-132 (132)
94 1iby_A Nitrosocyanin; RED copp 96.7 0.0073 2.5E-07 48.3 8.8 60 85-162 37-96 (112)
95 1paz_A Pseudoazurin precursor; 96.6 0.0073 2.5E-07 49.4 8.0 37 377-417 59-95 (123)
96 3sbq_A Nitrous-oxide reductase 96.6 0.0077 2.6E-07 61.4 9.6 79 310-416 558-637 (638)
97 1pmy_A Pseudoazurin; electron 96.5 0.0064 2.2E-07 49.7 7.1 38 376-417 58-95 (123)
98 3cvb_A Plastocyanin; cupredoxi 96.4 0.0029 9.9E-08 49.9 4.4 73 85-162 18-90 (105)
99 3ay2_A Lipid modified azurin p 96.3 0.012 4.1E-07 50.7 7.8 89 312-415 60-166 (167)
100 2cua_A Protein (CUA); CUA cent 95.9 0.029 1E-06 46.5 8.4 70 312-415 62-134 (135)
101 1cuo_A Protein (azurin ISO-2); 95.9 0.04 1.4E-06 45.4 9.0 89 312-415 20-128 (129)
102 4hci_A Cupredoxin 1; structura 95.7 0.035 1.2E-06 43.3 7.8 59 85-161 27-85 (100)
103 2ux6_A Pseudoazurin; type-1 co 95.7 0.028 9.7E-07 45.8 7.2 72 311-417 22-93 (122)
104 2iaa_C Azurin; quinoprotein, t 95.0 0.076 2.6E-06 43.6 7.8 44 371-415 81-127 (128)
105 1qhq_A Protein (auracyanin); e 94.9 0.052 1.8E-06 45.1 6.5 78 84-162 31-123 (140)
106 2ccw_A Azurin II, AZN-2; elect 94.7 0.095 3.2E-06 43.0 7.7 43 372-415 83-128 (129)
107 2gim_A Plastocyanin; beta shee 94.6 0.008 2.7E-07 47.5 0.8 72 85-161 19-90 (106)
108 2cal_A Rusticyanin; iron respi 94.5 0.076 2.6E-06 45.1 6.7 83 73-162 52-138 (154)
109 2ccw_A Azurin II, AZN-2; elect 94.3 0.033 1.1E-06 45.8 3.9 77 85-161 17-112 (129)
110 3fsa_A Azurin; copper, cupredo 94.3 0.21 7.1E-06 40.6 8.5 96 311-415 19-125 (125)
111 1nwp_A Azurin; electron transp 94.2 0.04 1.4E-06 45.3 4.1 76 85-160 17-111 (128)
112 1nwp_A Azurin; electron transp 94.1 0.17 6E-06 41.4 7.9 44 371-415 82-128 (128)
113 3s8f_B Cytochrome C oxidase su 94.1 0.19 6.6E-06 43.1 8.4 72 312-415 95-167 (168)
114 2iaa_C Azurin; quinoprotein, t 93.5 0.27 9.2E-06 40.2 7.9 75 85-160 16-110 (128)
115 3ay2_A Lipid modified azurin p 93.4 0.13 4.5E-06 44.2 6.1 78 84-161 56-150 (167)
116 3fsa_A Azurin; copper, cupredo 93.4 0.024 8.2E-07 46.2 1.3 77 85-161 17-112 (125)
117 1cuo_A Protein (azurin ISO-2); 93.4 0.067 2.3E-06 44.0 4.0 77 85-161 17-112 (129)
118 1bxv_A Plastocyanin; copper pr 92.8 0.42 1.4E-05 35.9 7.8 60 85-162 18-77 (91)
119 2plt_A Plastocyanin; electron 92.8 0.22 7.4E-06 38.3 6.1 68 85-162 17-84 (98)
120 1pcs_A Plastocyanin; electron 92.6 0.18 6.3E-06 38.7 5.4 67 85-162 18-84 (98)
121 1fwx_A Nitrous oxide reductase 92.2 0.57 1.9E-05 48.4 10.0 70 73-162 503-574 (595)
122 3tu6_A Pseudoazurin (blue copp 92.0 0.053 1.8E-06 44.5 1.7 29 4-37 70-98 (127)
123 1kdj_A Plastocyanin; electron 91.9 0.12 4E-06 40.2 3.5 64 85-161 16-87 (102)
124 3erx_A Pseudoazurin; copper pr 91.6 0.082 2.8E-06 43.0 2.4 27 4-35 68-94 (123)
125 1b3i_A PETE protein, protein ( 91.3 0.43 1.5E-05 36.5 6.3 64 85-162 18-83 (97)
126 1iuz_A Plastocyanin; electron 90.2 0.73 2.5E-05 35.4 6.6 67 85-161 17-83 (98)
127 2ov0_A Amicyanin; beta-sandwic 89.8 0.53 1.8E-05 36.8 5.6 63 84-162 31-93 (105)
128 3ef4_A Pseudoazurin, blue copp 89.2 0.13 4.5E-06 41.9 1.6 27 4-35 69-95 (124)
129 1pmy_A Pseudoazurin; electron 87.6 0.24 8.1E-06 40.3 2.1 27 4-35 68-94 (123)
130 1byp_A Protein (plastocyanin); 87.4 0.58 2E-05 35.9 4.2 68 85-162 16-85 (99)
131 1paz_A Pseudoazurin precursor; 87.0 0.46 1.6E-05 38.5 3.6 27 4-35 68-94 (123)
132 1plc_A Plastocyanin; electron 86.3 0.62 2.1E-05 35.7 3.8 68 85-162 16-85 (99)
133 3isy_A Bsupi, intracellular pr 85.2 8.3 0.00028 30.8 10.0 72 92-164 16-102 (120)
134 2cua_A Protein (CUA); CUA cent 83.5 4.5 0.00015 33.1 8.1 58 86-162 60-117 (135)
135 3sbq_A Nitrous-oxide reductase 82.8 5.2 0.00018 40.9 9.6 61 85-162 557-619 (638)
136 1id2_A Amicyanin; beta barrel, 82.6 2 6.8E-05 33.5 5.3 62 84-161 32-93 (106)
137 3c75_A Amicyanin; copper prote 78.6 3.6 0.00012 33.5 5.8 62 84-161 58-119 (132)
138 3s8f_B Cytochrome C oxidase su 76.8 10 0.00034 32.3 8.2 58 86-162 93-150 (168)
139 2ux6_A Pseudoazurin; type-1 co 73.6 0.79 2.7E-05 37.0 0.4 25 4-35 68-92 (122)
140 2r39_A FIXG-related protein; s 68.1 14 0.00047 29.2 6.7 47 95-151 34-82 (118)
141 1cyx_A CYOA; electron transpor 61.3 23 0.00077 31.1 7.2 73 311-415 42-115 (205)
142 3hb3_B Cytochrome C oxidase su 56.4 32 0.0011 32.0 7.8 76 310-417 189-265 (298)
143 2gsm_B Cytochrome C oxidase su 49.8 46 0.0016 30.3 7.6 75 311-417 172-247 (262)
144 2wtp_A ORF131 protein, CZCE; m 38.9 6.6 0.00023 31.8 0.1 24 86-109 71-94 (131)
145 1v54_B Cytochrome C oxidase po 37.5 83 0.0029 27.9 7.2 76 310-417 140-216 (227)
146 2p9r_A Alpha-2-M, alpha-2-macr 37.1 94 0.0032 23.2 6.6 68 90-163 13-84 (102)
147 4ay0_A Chaperone protein CAF1M 31.7 1.2E+02 0.0041 26.6 7.2 63 85-151 65-128 (218)
148 1x9u_A Umecyanin; cupredoxin, 27.7 56 0.0019 25.7 3.8 33 385-417 73-106 (116)
149 2xg5_A PAPD, chaperone protein 26.8 82 0.0028 27.7 5.2 20 85-104 54-73 (218)
150 1fft_B Ubiquinol oxidase; elec 26.2 71 0.0024 29.9 4.9 73 311-415 152-225 (315)
151 2r5o_A Putative ATP binding co 26.0 1.7E+02 0.0057 24.7 7.0 85 72-163 52-145 (188)
152 3q48_A Chaperone CUPB2; IG fol 25.2 95 0.0033 28.1 5.4 62 85-150 84-146 (257)
153 2wgn_B Inhibitor of cysteine p 24.2 2.7E+02 0.0094 22.2 7.8 73 87-162 36-110 (132)
154 1cyx_A CYOA; electron transpor 23.1 3.1E+02 0.011 23.8 8.0 60 87-165 42-101 (205)
155 3gfu_C Chaperone protein FAEE; 22.4 83 0.0028 27.9 4.3 21 85-105 53-73 (224)
156 2co7_B SAFB chaperone, putativ 21.4 1.7E+02 0.0059 25.6 6.3 20 85-104 63-82 (221)
157 3idu_A Uncharacterized protein 21.0 3.1E+02 0.011 21.6 9.5 68 89-165 28-98 (127)
158 4djm_A DRAB; chaperone, PILI; 20.9 1.4E+02 0.0046 26.7 5.5 21 85-105 73-93 (239)
159 3e8v_A Possible transglutamina 20.8 2.2E+02 0.0074 20.9 5.5 45 117-161 4-48 (82)
160 2znr_A AMSH-like protease; met 20.7 27 0.00094 29.8 0.8 7 10-16 86-92 (178)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=9.8e-76 Score=613.66 Aligned_cols=409 Identities=27% Similarity=0.411 Sum_probs=303.7
Q ss_pred CcccCCCceEEeccCCCcccCCCCCCCcceEEecCChh--------HHHHhhhccCcchHHHHHHhhhhccCCCCCCCCe
Q 013875 2 LKRSKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVR--------KLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPT 73 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 73 (434)
|++.|+||||||||.+.|+.+ ||+|+|||.+++.. +...++.++.......++......+.+....++.
T Consensus 93 f~~~~~GT~wYHsH~~~q~~~---Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (552)
T 1aoz_A 93 FTVDNPGTFFYHGHLGMQRSA---GLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQT 169 (552)
T ss_dssp EECCSCEEEEEEECSTTTGGG---TCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSE
T ss_pred EECCCCEEEEEEECchhHHhc---cCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhcccccCCCCCCe
Confidence 678999999999999999998 99999998876421 1111222222221122222222222233345799
Q ss_pred EEEcCCCCC-C---------------------CceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCe
Q 013875 74 YIINSAPFY-L---------------------DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPF 131 (434)
Q Consensus 74 ~lvNG~~~~-~---------------------~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~ 131 (434)
+||||+... + ..+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++++|+
T Consensus 170 ~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~ 249 (552)
T 1aoz_A 170 ILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPF 249 (552)
T ss_dssp EEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEE
T ss_pred EEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEECCcccCce
Confidence 999999641 0 012799999999999999999999999999999999999999999999
Q ss_pred eeeEEEeCCCCeEEEEEEe-CCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCC--CCCCCCCCCChhhhhhh
Q 013875 132 TTEAILIAPGQTTNVLVQA-NQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLP--TLAQLPASNDSEFALNY 208 (434)
Q Consensus 132 ~~~~~~l~~geR~dv~v~~-~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~--~~p~~p~~~~~~~~~~~ 208 (434)
.++++.|+|||||||+|++ ++.+|+|||++.... +. .+.....|+|+|.+......+ ..|..|.+++......+
T Consensus 250 ~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~--~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~ 326 (552)
T 1aoz_A 250 YTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH--PNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNF 326 (552)
T ss_dssp EESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC--CCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHH
T ss_pred EEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC--CCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccc
Confidence 9999999999999999999 555699999998754 21 134568999999876532211 22334444544332221
Q ss_pred hhccccCCCCCCCCCCCcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCC
Q 013875 209 NKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKP 288 (434)
Q Consensus 209 ~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~ 288 (434)
.++.+..+. +...+..+++++.+.+++.... +...|+|||++|..|..|+|.+.+.+++|.|..+++..+
T Consensus 327 --~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~~-------~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~ 396 (552)
T 1aoz_A 327 --TYRITAAMG-SPKPPVKFNRRIFLLNTQNVIN-------GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEV 396 (552)
T ss_dssp --HTTCCBCTT-CCCCCSSCSEEEEEEEEEEEET-------TEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSC
T ss_pred --cccccccCC-CCCCCCCCcEEEEEEEeeccCC-------CeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccc
Confidence 233332222 2234566788888776543211 345799999999999999999988888888876655433
Q ss_pred C-CCCCCCCCCCCCCCCcccceeeeEeecCCeEEEEEEeCCCCC---CCCCCccccCCceEEEEecCCcCCCCCCCCCCC
Q 013875 289 P-KPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLT---VESHPFHLHGYNFFVVGTGIGNFDPVKYPANYN 364 (434)
Q Consensus 289 p-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~---~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n 364 (434)
+ ..|+++.. +.+...+.++.++.++.|++|+|+|+|.+.+. ...||||||||+||||++|.|.|++ .+...+|
T Consensus 397 ~~~~~~~~~~--~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~-~~~~~~n 473 (552)
T 1aoz_A 397 FPEDYDIDTP--PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA-EEESSLN 473 (552)
T ss_dssp CCTTCCTTSC--CCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCG-GGGGGSC
T ss_pred cccccccccc--cccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCc-ccccccc
Confidence 3 13444321 11123456788899999999999999976433 5679999999999999999898876 4456789
Q ss_pred CCCCCccceeEecCCcEEEEEEEcCCceeeEEeecchhhHHccceeEEEEecCCCCCCCCCCCCCCCCCC
Q 013875 365 LVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC 434 (434)
Q Consensus 365 ~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~~~~~~~~~~~~~p~~~~~c 434 (434)
+.+|+|||||.|+++||++|||+|||||.|+|||||+||++.|||++|.|... ++.++|.++++|
T Consensus 474 ~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C 538 (552)
T 1aoz_A 474 LKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALAC 538 (552)
T ss_dssp CSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSS
T ss_pred cCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhh
Confidence 99999999999999999999999999999999999999999999999987542 566789999999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.2e-70 Score=571.89 Aligned_cols=367 Identities=25% Similarity=0.374 Sum_probs=269.0
Q ss_pred CcccCCCceEEeccCCCcccCCCCCCCcceEEecCChhH----H-HHhhhccCcchHHHHHHhhhhccCCCCCCCCeEEE
Q 013875 2 LKRSKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRK----L-SKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYII 76 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~~----l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~lv 76 (434)
|++.|+||||||||.+.|+.+ ||+|+|||.++.... + ..++.++.......++..... ++++.+|.+||
T Consensus 157 f~~~q~GT~WYHsH~~~q~~~---GL~G~lIV~~p~~~~yD~d~~~l~l~Dw~~~~~~~~~~~~~~---~~~~~~d~~li 230 (580)
T 3sqr_A 157 FQVTQYGTTWYHSHFSLQYGD---GLFGPLIINGPATADYDEDVGVIFLQDWAHESVFEIWDTARL---GAPPALENTLM 230 (580)
T ss_dssp EECCCCEEEEEEECSTTGGGG---TCEEEEEEECCCSSCCSEEEEEEEEEEECSSCHHHHHHHHTT---SCCCCBSEEEE
T ss_pred EECCCCcceEEeecccccccC---cCEEEEEeeCcccCCCCccceEEEEEEEecCCHHHHHHHHhc---cCCCCCceEEE
Confidence 678899999999999999999 999999988754221 1 112233322222223332221 33567899999
Q ss_pred cCCCCC-------------CCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCe
Q 013875 77 NSAPFY-------------LDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQT 143 (434)
Q Consensus 77 NG~~~~-------------~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR 143 (434)
||+... ...+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++|||
T Consensus 231 NG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqR 310 (580)
T 3sqr_A 231 NGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQR 310 (580)
T ss_dssp TTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCE
T ss_pred CCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCceEeeEEEEccceE
Confidence 999641 1257899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCC
Q 013875 144 TNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPAD 223 (434)
Q Consensus 144 ~dv~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~ 223 (434)
|||+|++++++|+|||++.....|..........|||+|.++... .|..+..+ ..+.... .....|.++ .+..
T Consensus 311 ydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~-~P~~~~~~-~~~~~~~-~~~~~L~P~----~~~~ 383 (580)
T 3sqr_A 311 YDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA-NPTSVGTT-PRGTCED-EPVASLVPH----LALD 383 (580)
T ss_dssp EEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC-CCCCCCCC-CCCCSCC-SCGGGCCBS----SCCB
T ss_pred EEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCC-CCCCCCCC-ccchhhc-ccccccccC----CCCC
Confidence 999999999889999999877655322233468999999875422 22221111 1111000 000123332 1223
Q ss_pred CCcccceEEEEEeccCCCCCCccCCCceEEEeecCccccC-CChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCC
Q 013875 224 VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVM-PQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTAS 302 (434)
Q Consensus 224 ~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~-p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~ 302 (434)
++...+.++.+.++.. +.+.|+|||.+|.. +..|+|.+.+.+. .+++
T Consensus 384 ~~~~~~~~~~l~~~~~----------~~~~w~iN~~s~~~~~~~P~L~~~~~g~-----~~~~----------------- 431 (580)
T 3sqr_A 384 VGGYSLVDEQVSSAFT----------NYFTWTINSSSLLLDWSSPTTLKIFNNE-----TIFP----------------- 431 (580)
T ss_dssp CCSEEEEEEEEEEEES----------SSEEEEETTBCCCCCTTSCHHHHHHTTC-----CCCC-----------------
T ss_pred CCCccceEEEEEeccC----------CceeEEECCEecccCCCCCchhhhhcCC-----ccCC-----------------
Confidence 3444455555544311 45689999999975 4678777654321 1111
Q ss_pred CCcccceeeeEe----ecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecC
Q 013875 303 LGTSRATRLSKI----AFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT 378 (434)
Q Consensus 303 ~~~~~~~~~~~~----~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~ 378 (434)
....++.+ +.|++|||+|+|.+.. .+.||||||||+|+||++|.|.|++.+++..+|+.||+||||+.|++
T Consensus 432 ----~~~~~~~~~~~~~~~~~VeiVi~n~~~~-~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~ 506 (580)
T 3sqr_A 432 ----TEYNVVALEQTNANEEWVVYVIEDLTGF-GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPG 506 (580)
T ss_dssp ----GGGCEEEECC----CCEEEEEEEECSSS-CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECT
T ss_pred ----CCcceeecccccCCCcEEEEEEeCCCcc-ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCC
Confidence 12233444 4699999999996532 57999999999999999999999987667789999999999999999
Q ss_pred CcEEEEEEEcCCceeeEEeecchhhHHccceeEEEEecCC
Q 013875 379 GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418 (434)
Q Consensus 379 ~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~~~~ 418 (434)
+||++|||++||||.|+|||||+||++.||+++|.+.+.+
T Consensus 507 ~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~~ 546 (580)
T 3sqr_A 507 NGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSS 546 (580)
T ss_dssp TSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGGG
T ss_pred CceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHHH
Confidence 9999999999999999999999999999999999976543
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=2.9e-69 Score=555.13 Aligned_cols=361 Identities=26% Similarity=0.406 Sum_probs=261.1
Q ss_pred Ccc-cCCCceEEeccCCCcccCCCCCCCcceEEecCChhHHHHhhhc-cCcchHHHHHHhhhhccC----CCCCCCCeEE
Q 013875 2 LKR-SKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRKLSKLLEK-TSSLGIDIIYSNLLKNSF----GFLALNPTYI 75 (434)
Q Consensus 2 ~~~-~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~d~~l 75 (434)
|++ .|+||||||||.+.|+.+ ||+|+|||.++.... ...++. ..+.. ++++||..+.. +.+..+|++|
T Consensus 97 f~~~~~~GT~wYHsH~~~q~~~---GL~G~lIV~~~~~~~-~~~~~~d~~~~~--l~l~Dw~~~~~~~~~~~p~~~d~~l 170 (499)
T 3pxl_A 97 FQVPDQAGTFWYHSHLSTQYCD---GLRGPFVVYDPNDPH-ASRYDVDNDDTV--ITLADWYHTAAKLGPRFPGGADATL 170 (499)
T ss_dssp EECSSCCEEEEEEECSTTGGGG---TCEEEEEEECTTCTT-GGGCSBCSGGGE--EEEEEECSSCTTTSCSSCSSCSEEE
T ss_pred EEcCCCCceeeeeccchhHHhc---cceeEEEEcCCcccc-cccCCCCCceEE--EEEEcccCCccccccCCCCCCcEEE
Confidence 566 799999999999999999 999999987654321 111111 01111 23444443221 2234789999
Q ss_pred EcCCCC-----CCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEe
Q 013875 76 INSAPF-----YLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQA 150 (434)
Q Consensus 76 vNG~~~-----~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~ 150 (434)
|||++. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|+|||||||+|++
T Consensus 171 iNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~ 250 (499)
T 3pxl_A 171 INGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDA 250 (499)
T ss_dssp ETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEEC
T ss_pred ECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEEC
Confidence 999853 123578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCC-CCCcccc
Q 013875 151 NQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPA-DVPQKVD 229 (434)
Q Consensus 151 ~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~-~~p~~~~ 229 (434)
++++|+|||++.+...+. .+......|+|+|.++.... |..+..+.... ....+|+++.....|. ..+..+|
T Consensus 251 ~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~-p~~~~~~~~~~-----~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 251 NQAVDNYWIRANPNFGNV-GFDGGINSAILRYDGAPAVE-PTTNQTTSVKP-----LNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp CSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSC-CCCCCCCCSSB-----CCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred CCCCceEEEEEecccCcc-ccCCCceEEEEEeCCCCCCC-CCCCCCCCCcc-----cccccccccccccCCCcccCCCCc
Confidence 998899999998654432 12233468999998754322 11111111000 0112455553322221 1234567
Q ss_pred eEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCcccce
Q 013875 230 RKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRAT 309 (434)
Q Consensus 230 ~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 309 (434)
+++.+.+++.. ..|+|||++|..|+.|+|.+.+.+ ..... ......
T Consensus 324 ~~~~l~~~~~~-----------~~w~iNg~s~~~~~~P~L~~~~~g---~~~~~--------------------~~~~~~ 369 (499)
T 3pxl_A 324 KAINMAFNFNG-----------SNFFINGASFVPPTVPVLLQILSG---AQTAQ--------------------DLLPSG 369 (499)
T ss_dssp EEEECCEEECS-----------SCEEETTBCCCCCSSCHHHHHHTT---CCSTT--------------------TSSSTT
T ss_pred EEEEEEEEecC-----------cEEEEcCEecCCCCCchhhhhhcC---Ccccc--------------------ccCCCc
Confidence 77776554321 258999999999888887765432 11100 001134
Q ss_pred eeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecC---CcEEEEEE
Q 013875 310 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGWTAIRF 386 (434)
Q Consensus 310 ~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~---~g~v~irf 386 (434)
.++.++.|++|+|+|+|.+....+.||||||||+|+||+.+ | ...+|+.+|+||||+.|++ ++|++|||
T Consensus 370 ~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~-g-------~~~~n~~~P~~rDtv~v~~~~pg~~~~irf 441 (499)
T 3pxl_A 370 SVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA-G-------STVYNYDNPIFRDVVSTGTPAAGDNVTIRF 441 (499)
T ss_dssp SEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECT-T-------CCCCCSSSCCEESEEECCCGGGTCEEEEEE
T ss_pred eeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEecc-C-------CcccccCCCCccceEEcCCcCCCcEEEEEE
Confidence 57899999999999995322246789999999999999874 2 2357889999999999997 99999999
Q ss_pred EcCCceeeEEeecchhhHHccceeEEEEecC
Q 013875 387 RADNPGVWFMHCHLELHTGWGLKTAFAVEDG 417 (434)
Q Consensus 387 ~adnpG~w~~HCHil~H~d~GM~~~~~v~~~ 417 (434)
++||||.|+|||||+||++.||+++|.+.+.
T Consensus 442 ~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~ 472 (499)
T 3pxl_A 442 DTNNPGPWFLHCHIDFHLEGGFAVVMAEDTP 472 (499)
T ss_dssp ECCSCEEEEEEESSHHHHHTTCEEEEEESGG
T ss_pred EcCCCceEEEEeCChhHhhCCCcEEEEEChh
Confidence 9999999999999999999999999975543
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-69 Score=561.42 Aligned_cols=366 Identities=23% Similarity=0.300 Sum_probs=263.0
Q ss_pred Cccc-CCCceEEeccCCCcccCCCCCCCcceEEecCChh-----HHHHhhhccCcchHHHHHHhhh--hccCCCCCCCCe
Q 013875 2 LKRS-KSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVR-----KLSKLLEKTSSLGIDIIYSNLL--KNSFGFLALNPT 73 (434)
Q Consensus 2 ~~~~-~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~ 73 (434)
|++. |+||||||||...|+.+ ||+|+|||.+++.. ++...+.++.......++.... .+..+..+.+|.
T Consensus 93 f~~~~~~GT~wYH~H~~~q~~~---Gl~G~liV~~~~~p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~ 169 (534)
T 1zpu_A 93 FTVDYNVGTYWYHSHTDGQYED---GMKGLFIIKDDSFPYDYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQN 169 (534)
T ss_dssp EECSSCCEEEEEECCSSSGGGG---TCEEEEEEECTTCCSCCSEEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSE
T ss_pred EEeCccceeEEEEEcCcccccC---cceeeEEeCCCCCCCCCcceEEEEeeccccCCHHHHHHHHhccccCCCCCCCCce
Confidence 5666 99999999999999999 99999998876532 1111222332222122222221 123345578899
Q ss_pred EEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCC
Q 013875 74 YIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQK 153 (434)
Q Consensus 74 ~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~ 153 (434)
+||||+. .+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||++++|+.++.|.|+|||||||+|++++.
T Consensus 170 ~liNG~~----~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~ 245 (534)
T 1zpu_A 170 LIVNNTM----NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKND 245 (534)
T ss_dssp EEETTBS----SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSC
T ss_pred EEECCCC----ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCC
Confidence 9999994 589999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -CCceEEEEeccCCCCC---CCCCcceEEEEEEcCCCCCCCCC-CCCCCC-CCChhhhhhhhhccccCCCCCCCCCCCcc
Q 013875 154 -PGRYFMAARPFNDAPI---PVDNKTATGILQYKGIPNSLLPT-LAQLPA-SNDSEFALNYNKKLRSLNSPKFPADVPQK 227 (434)
Q Consensus 154 -~g~~~l~a~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~-~p~~p~-~~~~~~~~~~~~~l~~l~~~~~p~~~p~~ 227 (434)
.++|||++.....+.. ........++|+|.++...+.+. ....+. +.+ ..++++.. ..++..
T Consensus 246 ~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~--------~~l~p~~~----~~~~~~ 313 (534)
T 1zpu_A 246 TDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDD--------FYLQPYEK----EAIYGE 313 (534)
T ss_dssp SSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCG--------GGCCBSSC----CCCCCS
T ss_pred CCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCccccccccccc--------ccceeCCC----CCCCCC
Confidence 4799999875432110 11234578999998754321111 111111 111 12333321 123345
Q ss_pred cceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCccc
Q 013875 228 VDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSR 307 (434)
Q Consensus 228 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 307 (434)
+++++.+.+.+.... . +...|+|||++|..++.|+|.+.+.. +.+..+ +. ....
T Consensus 314 ~~~~~~l~~~~~~~~----~--~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~~~-----~~-------------~~~~ 367 (534)
T 1zpu_A 314 PDHVITVDVVMDNLK----N--GVNYAFFNNITYTAPKVPTLMTVLSS--GDQANN-----SE-------------IYGS 367 (534)
T ss_dssp CSEEEEEEEEEEECT----T--SCEEEEETTBCCCCCSSCHHHHHTTS--GGGTTC-----GG-------------GGCS
T ss_pred CCeEEEEEEEeeccC----C--ceeEEEECCCcccCCCCCceeeeccc--CcccCC-----Cc-------------ccCC
Confidence 678887776543210 1 23468999999999988887664321 211110 00 0112
Q ss_pred ceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCC----------cCCCCCCCCCCCCCCCCccceeEec
Q 013875 308 ATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIG----------NFDPVKYPANYNLVDPIERNTAAVP 377 (434)
Q Consensus 308 ~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g----------~~~~~~~~~~~n~~~p~~rDTv~vp 377 (434)
++.++.++.|++|+|+|+|.+ .+.||||||||+||||+++.+ .|++.. ... ...+|+|||||.|+
T Consensus 368 ~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~-~~~-~~~~p~~RDTv~V~ 442 (534)
T 1zpu_A 368 NTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDN-HPA-FPEYPMRRDTLYVR 442 (534)
T ss_dssp SSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTB-CCC-CCSSCEEESEEEEC
T ss_pred CceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCccccccCcccccCccc-ccc-ccCCCCeeeEEEeC
Confidence 456789999999999999975 679999999999999999864 344321 112 24689999999999
Q ss_pred CCcEEEEEEEcCCceeeEEeecchhhHHccceeEEEEecC
Q 013875 378 TGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDG 417 (434)
Q Consensus 378 ~~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~~~ 417 (434)
+++|++|||++||||.|+|||||+||++.|||++|.|.+.
T Consensus 443 pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~ 482 (534)
T 1zpu_A 443 PQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPF 482 (534)
T ss_dssp TTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred CCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECcc
Confidence 9999999999999999999999999999999999988654
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1.8e-68 Score=549.15 Aligned_cols=358 Identities=26% Similarity=0.384 Sum_probs=258.6
Q ss_pred Ccc-cCCCceEEeccCCCcccCCCCCCCcceEEecCChhHHHHhhhc-cCcchHHHHHHhhhhcc-----CCCCCCCCeE
Q 013875 2 LKR-SKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRKLSKLLEK-TSSLGIDIIYSNLLKNS-----FGFLALNPTY 74 (434)
Q Consensus 2 ~~~-~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~d~~ 74 (434)
|++ .|+||||||||.+.|+.+ ||+|+|||.++.... ...++. ..+.. ++++||..+. .+.+..+|++
T Consensus 98 f~~~~~~GT~wYHsH~~~q~~~---GL~G~lIV~~~~~~~-~~~~~~d~~e~~--l~l~Dw~~~~~~~~~~~~p~~~d~~ 171 (495)
T 3t6v_A 98 FNVPGMAGTYWYHSHLTTQYCD---GLRGPFVVYDPNDPD-ANLYDVDDDTTI--ITLADWYHVLAKEMGAGGAITADST 171 (495)
T ss_dssp EECTTCCEEEEEEECSTTGGGG---TCEEEEEEECTTCTT-GGGCSBCSGGGE--EEEEEECSSCGGGSCSSSCCCCSEE
T ss_pred EEeCCCCceeeeeccchhHHhc---CceEEEEEcCccccc-cccCCCCCceeE--EEEecccCCchhhhccCCCCCCcEE
Confidence 566 799999999999999999 999999987654321 111111 01110 1334443221 1223478999
Q ss_pred EEcCCCC------CCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEE
Q 013875 75 IINSAPF------YLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLV 148 (434)
Q Consensus 75 lvNG~~~------~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v 148 (434)
||||++. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++++.|+|||||||+|
T Consensus 172 liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv 251 (495)
T 3t6v_A 172 LIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVL 251 (495)
T ss_dssp EETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEE
T ss_pred EECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceEEEEEE
Confidence 9999853 1235789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCC-CCCChhhhhhhhhccccCCCCCCCC-CCCc
Q 013875 149 QANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLP-ASNDSEFALNYNKKLRSLNSPKFPA-DVPQ 226 (434)
Q Consensus 149 ~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p-~~~~~~~~~~~~~~l~~l~~~~~p~-~~p~ 226 (434)
++++++|+|||++.+...+. .+......|+|+|.++.... |..+..+ .... .....|+++.....|. +.+.
T Consensus 252 ~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~-p~~~~~~~~~~~-----~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 252 NANQPVGNYWIRANPNSGGE-GFDGGINSAILRYDGATTAD-PVTVASTVHTKC-----LIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp ECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSC-CCCCCCSSCSSB-----CCGGGCCBSSCCCCSSCSSTT
T ss_pred ECCCCCceEEEEEecccCcc-ccCCCceEEEEEECCCCCCC-CCCCCCCCCccc-----cccccccccccccCCCccCCC
Confidence 99998899999998654432 12233458999998754322 1111100 0000 0112455553322221 1234
Q ss_pred ccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCcc
Q 013875 227 KVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTS 306 (434)
Q Consensus 227 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 306 (434)
.+++++.+.+++. ...|+|||++|..++.|+|.+.+.+ .+... ...
T Consensus 325 ~~d~~~~l~~~~~-----------~~~w~iNg~s~~~~~~P~L~~~~~g---~~~~~--------------------~~~ 370 (495)
T 3t6v_A 325 GADCNLNLSLGFA-----------CGNFVINGVSFTPPTVPVLLQICSG---ANTAA--------------------DLL 370 (495)
T ss_dssp CSSEEEECCEEEE-----------TTEEEETTBCCCCCSSCHHHHHHTT---CCSST--------------------TSS
T ss_pred CCcEEEEEEEEec-----------CcEEEEcCEecCCCCCcchhhhhcC---CcCcc--------------------ccc
Confidence 5677776655432 1268999999999888887765432 11100 001
Q ss_pred cceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecC-CcEEEEE
Q 013875 307 RATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT-GGWTAIR 385 (434)
Q Consensus 307 ~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~-~g~v~ir 385 (434)
....++.++.|++|+|+|+|.. ..+.||||||||+|+||+.+ | ...+|+.+|+||||+.|++ |+|++||
T Consensus 371 ~~~~v~~~~~g~~V~ivl~~n~--~~~~HP~HLHGh~F~vl~~~-g-------~~~~n~~~P~~rDtv~v~~~g~~~~ir 440 (495)
T 3t6v_A 371 PSGSVISLPSNSTIEIALPAGA--AGGPHPFHLHGHDFAVSESA-S-------NSTSNYDDPIWRDVVSIGGVGDNVTIR 440 (495)
T ss_dssp STTSEEEECTTCEEEEEEECCS--SSCCCEEEETTCCEEEEECT-T-------CCCCCSSSCCEESEEECCSTTCEEEEE
T ss_pred CCcceEEecCCCEEEEEEccCC--CCCCcceeecCCcEEEEecC-C-------CCCcccCCCCCccEEEcCCCCcEEEEE
Confidence 1345789999999999998422 36899999999999999874 2 2357889999999999997 8999999
Q ss_pred EEcCCceeeEEeecchhhHHccceeEEEEec
Q 013875 386 FRADNPGVWFMHCHLELHTGWGLKTAFAVED 416 (434)
Q Consensus 386 f~adnpG~w~~HCHil~H~d~GM~~~~~v~~ 416 (434)
|++||||.|+|||||+||++.||+++|.+.+
T Consensus 441 f~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (495)
T 3t6v_A 441 FCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI 471 (495)
T ss_dssp EECCSCEEEEEEESCHHHHHTTCEEEEEETH
T ss_pred EEcCCCeeEEEEecchhHhhcCCeEEEEECh
Confidence 9999999999999999999999999997654
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=7e-69 Score=557.50 Aligned_cols=372 Identities=28% Similarity=0.384 Sum_probs=264.7
Q ss_pred Cc-ccCCCceEEeccCCCcccCCCCCCCcceEEecCChhHHHHhhhcc-CcchHHHHHHhhhhcc--------CCCCCCC
Q 013875 2 LK-RSKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKT-SSLGIDIIYSNLLKNS--------FGFLALN 71 (434)
Q Consensus 2 ~~-~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~~ 71 (434)
|+ ++|+||||||||...|+.+ ||+|+|||.++.... ...++.. .+. -++++|+..+. .+..+.+
T Consensus 118 f~~~~~~GT~wYH~H~~~q~~~---Gl~G~liV~~~~~~~-~~~~~~d~~e~--~l~l~D~~~~~~~~~~~~~~~~~~~~ 191 (521)
T 1v10_A 118 FVVPGQAGTYWYHSHLSTQYCD---GLRGAFVVYDPNDPH-LSLYDVDDAST--VITIADWYHSLSTVLFPNPNKAPPAP 191 (521)
T ss_dssp EECTTCCEEEEEEECSTTGGGG---TCEEEEEEECTTCTT-GGGCSBCSGGG--EEEEEEECSSCCC-------CCCSCC
T ss_pred EecCCCCccEEEEeccCCchhc---CceEEEEEcCCcccc-cccCCCCCcee--EEEEcccccCCHHHHhhccCCCCCCC
Confidence 56 7899999999999999999 999999987754221 1111110 111 12344443322 1234568
Q ss_pred CeEEEcCCCCC------CCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEE
Q 013875 72 PTYIINSAPFY------LDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTN 145 (434)
Q Consensus 72 d~~lvNG~~~~------~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~d 145 (434)
|.+||||+... ...+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++++|+.++++.|+||||||
T Consensus 192 d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~d 271 (521)
T 1v10_A 192 DTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYS 271 (521)
T ss_dssp SEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEE
T ss_pred CEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccccceeeeeEEEcccceEE
Confidence 99999999631 112789999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCC-CC
Q 013875 146 VLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPA-DV 224 (434)
Q Consensus 146 v~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~-~~ 224 (434)
|+|++++++|+|||++.....+.. +......++|+|.+..... +..+.. ..... ...+++++.....|. ..
T Consensus 272 vlv~~~~~~g~y~i~~~~~~~~~~-~~~~~~~ail~y~~~~~~~-p~~~~~-~~~~~-----~~~~l~p~~~~~~p~~~~ 343 (521)
T 1v10_A 272 VVVEANQAVGNYWIRANPSNGRNG-FTGGINSAIFRYQGAAVAE-PTTSQN-SGTAL-----NEANLIPLINPGAPGNPV 343 (521)
T ss_dssp EEEECCSCSSEEEEEEEESSSSCS-CGGGTTEEEEEETTCCSCC-CCCCCC-CSCBC-----CGGGCCBSSCCCCSSCSS
T ss_pred EEEEcCCCCCceeeeecccccccc-CCCCceeEEEEECCCCCCC-CCCCCC-ccccc-----chhhcccCCcccCCCccc
Confidence 999999877999999986543221 2222347999998764332 111100 00000 012344443222221 12
Q ss_pred CcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCC
Q 013875 225 PQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLG 304 (434)
Q Consensus 225 p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~ 304 (434)
+...++++.+..+++. ....|+|||++|..+..|+|.+.+.+ .+... .
T Consensus 344 ~~~~~~~~~l~~~~~~---------~~~~~~iNg~~~~~~~~P~l~~~~~g---~~~~~--------------------~ 391 (521)
T 1v10_A 344 PGGADINLNLRIGRNA---------TTADFTINGAPFIPPTVPVLLQILSG---VTNPN--------------------D 391 (521)
T ss_dssp TTCSSEEEECCEECCS---------SSSCCEESSCCCCCCSSCHHHHHHHT---CCCGG--------------------G
T ss_pred CCcceEEEEEEEecCC---------ceeEEEECCCcccCCCCchhhhhhcC---Ccccc--------------------c
Confidence 2244555544433211 22368999999998888887765432 11000 0
Q ss_pred cccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEe-cCCcEEE
Q 013875 305 TSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAV-PTGGWTA 383 (434)
Q Consensus 305 ~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~v-p~~g~v~ 383 (434)
++.++.++.++.|++|||+++| .+.||||||||+||||+++.+. .+|+.+|+|||||.| +++||++
T Consensus 392 ~~~~~~~~~v~~g~~vei~l~N-----~~~HP~HLHGh~F~Vl~~~~~~--------~~n~~~p~~rDTV~V~p~gg~v~ 458 (521)
T 1v10_A 392 LLPGGAVISLPANQVIEISIPG-----GGNHPFHLHGHNFDVVRTPGSS--------VYNYVNPVRRDVVSIGGGGDNVT 458 (521)
T ss_dssp SSSTTTEEEECTTCEEEEEEEC-----CBSCEEEESSCCEEEEECTTCS--------CCCCSSCCEESEEECCBSSCEEE
T ss_pred CCCCceEEEecCCCEEEEEEcC-----CCCCCEEEccceEEEEecCCCC--------ccccCCCCeeeeEEeCCCCcEEE
Confidence 1124567899999999999999 3689999999999999997542 357889999999999 8999999
Q ss_pred EEEEcCCceeeEEeecchhhHHccceeEEEEecCCCCCCCCCCCC-CCCCCC
Q 013875 384 IRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPP-TDLPPC 434 (434)
Q Consensus 384 irf~adnpG~w~~HCHil~H~d~GM~~~~~v~~~~~~~~~~~~~p-~~~~~c 434 (434)
|||++||||.|+|||||+||++.|||++|.|.+.+. .++.++| +..+.|
T Consensus 459 Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C 508 (521)
T 1v10_A 459 FRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNI--PIANAISPAWDDLC 508 (521)
T ss_dssp EEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGH--HHHSCCCHHHHTHH
T ss_pred EEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcch--hhccCCChHHhhhc
Confidence 999999999999999999999999999999876532 2344344 456666
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=7.7e-69 Score=555.26 Aligned_cols=375 Identities=28% Similarity=0.423 Sum_probs=264.3
Q ss_pred Cc-ccCCCceEEeccCCCcccCCCCCCCcceEEecCChhHHHHhhhcc-CcchHHHHHHhhhhccCC---CCCCCCeEEE
Q 013875 2 LK-RSKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKT-SSLGIDIIYSNLLKNSFG---FLALNPTYII 76 (434)
Q Consensus 2 ~~-~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~d~~lv 76 (434)
|+ +.|+||||||||.+.|+.+ ||+|+|||.++.... ...++.. .+.. ++++|+..+..+ ..+.+|.+||
T Consensus 97 f~~~~~~GT~wYH~H~~~q~~~---Gl~G~liV~~~~~~~-~~~~~~d~~e~~--l~l~Dw~~~~~~~~~~~~~~d~~li 170 (503)
T 1hfu_A 97 FTPAGHAGTFWYHSHFGTQYCD---GLRGPMVIYDDNDPH-AALYDEDDENTI--ITLADWYHIPAPSIQGAAQPDATLI 170 (503)
T ss_dssp ECCTTCCEEEEEEECSTTGGGG---TCEEEEEEECTTCTT-GGGCSBCSTTSE--EEEEEECSSCGGGCC---CCSEEEE
T ss_pred EEeCCCCccEEEEecchhhhhC---cceeeEEEcCCCCCc-ccCCCCCCceEE--EEEcccccCChHHhcCCCCCCEEEE
Confidence 56 7899999999999999999 999999987754321 1112111 1221 355555543321 1256899999
Q ss_pred cCCCC-----CCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeC
Q 013875 77 NSAPF-----YLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQAN 151 (434)
Q Consensus 77 NG~~~-----~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~ 151 (434)
||+.. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++++|+.++++.|+|||||||+|+++
T Consensus 171 NG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~ 250 (503)
T 1hfu_A 171 NGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDAN 250 (503)
T ss_dssp TTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECC
T ss_pred CcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEEcccceEEEEEEcC
Confidence 99963 1123889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEeccCCCCC---CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCC-CCCcc
Q 013875 152 QKPGRYFMAARPFNDAPI---PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPA-DVPQK 227 (434)
Q Consensus 152 ~~~g~~~l~a~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~-~~p~~ 227 (434)
+++|+|||++.....+.. .+......++|+|.+..... |..+..+...... ...++++.....|. ..+..
T Consensus 251 ~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~-p~~~~~~~~~~l~-----~~~l~p~~~~~~p~~~~~~~ 324 (503)
T 1hfu_A 251 QPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANAD-PTTSANPNPAQLN-----EADLHALIDPAAPGIPTPGA 324 (503)
T ss_dssp SCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSC-CCCCCCSSCCBCC-----GGGCBBSSSCSCSSCSSTTC
T ss_pred CCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCC-CCCCCCCccCCCc-----cccccccCccCCCCcccCCc
Confidence 877999999986533211 01222347999998764321 1111111100000 11344443222221 11223
Q ss_pred cceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCccc
Q 013875 228 VDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSR 307 (434)
Q Consensus 228 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 307 (434)
.++++.+..++. +. .|+|||++|..+..|+|.+.+.+ .+... .++.
T Consensus 325 ~~~~~~l~~~~~----------~~-~~~iNg~~~~~~~~P~l~~~~~g---~~~~~--------------------~~~~ 370 (503)
T 1hfu_A 325 ADVNLRFQLGFS----------GG-RFTINGTAYESPSVPTLLQIMSG---AQSAN--------------------DLLP 370 (503)
T ss_dssp SSEEEECCEEEE----------TT-EEEETTBCCCCCSSCHHHHHHTT---CCSGG--------------------GSSS
T ss_pred ceEEEEEEeecc----------Cc-eEEECCCccCCCCCcchhhhhcC---Ccccc--------------------cCCC
Confidence 455544333211 11 69999999998888887765422 11100 0123
Q ss_pred ceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEe-cCCcEEEEEE
Q 013875 308 ATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAV-PTGGWTAIRF 386 (434)
Q Consensus 308 ~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~v-p~~g~v~irf 386 (434)
++.++.++.|++|||+++|.. ..+.||||||||+|+||+++.+. .+|+.+|+|||||.| ++++|++|||
T Consensus 371 ~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~--------~~n~~~p~~rDTV~V~ppg~~v~irf 440 (503)
T 1hfu_A 371 AGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS--------TYNFVNPVKRDVVSLGVTGDEVTIRF 440 (503)
T ss_dssp TTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC--------CCCCSSBCEESEEECCSTTCEEEEEE
T ss_pred CceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC--------ccccCCCCeeeeEEecCCCceEEEEE
Confidence 467799999999999999643 36799999999999999997542 357789999999999 9999999999
Q ss_pred EcCCceeeEEeecchhhHHccceeEEEEecCCCCCCCCCCCC-CCCCCC
Q 013875 387 RADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPP-TDLPPC 434 (434)
Q Consensus 387 ~adnpG~w~~HCHil~H~d~GM~~~~~v~~~~~~~~~~~~~p-~~~~~c 434 (434)
++||||.|+|||||+||++.|||++|.|.+.+. .++.++| +..+.|
T Consensus 441 ~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C 487 (503)
T 1hfu_A 441 VTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANT--VDANNPPVEWAQLC 487 (503)
T ss_dssp ECCSCEEEEEEESSHHHHHTTCEEEEEECHHHH--HHHCCCCHHHHHHH
T ss_pred EcCCCeeeeEecCchhHhhCCCeEEEEECchhh--hhccCCChHHhhhc
Confidence 999999999999999999999999999865432 2344344 445555
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1e-67 Score=552.75 Aligned_cols=372 Identities=21% Similarity=0.336 Sum_probs=257.9
Q ss_pred CcccCCCceEEeccCCCcccCCCCCCCcceEEecCChhH----H-HHhhhccCcchHHHHHHhhhhccCCCCCCCCeEEE
Q 013875 2 LKRSKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRK----L-SKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYII 76 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~~----l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~lv 76 (434)
|++.|+||||||||.+.|+.+ ||+|+|||.+++... + ..++.++.......++.... .+.++.+|.+||
T Consensus 127 f~~~q~GT~wYH~H~~~q~~~---Gl~G~liV~~~~~~~~d~d~~~l~l~Dw~~~~~~~~~~~~~---~~~~~~~d~~li 200 (559)
T 2q9o_A 127 WRARQYGTSWYHSHFSAQYGN---GVVGTIQINGPASLPYDIDLGVFPITDYYYRAADDLVHFTQ---NNAPPFSDNVLI 200 (559)
T ss_dssp EECCSCEEEEEEECSTTGGGG---TCEEEEEEECCCSSCCSEEEEEEEEEEECSSCHHHHHHHHT---TSCCCCBSEEEE
T ss_pred EECCCCEEEEEEEcccchhcC---CceEEEEecCCCcCCCcccceEEEEeccccCCHHHHhhhhh---cCCCCccceeEE
Confidence 678999999999999999999 999999988764321 0 11222222221112221111 234567899999
Q ss_pred cCCCCC-----CCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeC
Q 013875 77 NSAPFY-----LDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQAN 151 (434)
Q Consensus 77 NG~~~~-----~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~ 151 (434)
||+... ...+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++++.|+|||||||+|+++
T Consensus 201 NG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~ 280 (559)
T 2q9o_A 201 NGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDAS 280 (559)
T ss_dssp TTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECC
T ss_pred CCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECC
Confidence 999641 124689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEec--cCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCC-CCccc
Q 013875 152 QKPGRYFMAARP--FNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPAD-VPQKV 228 (434)
Q Consensus 152 ~~~g~~~l~a~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~-~p~~~ 228 (434)
+.+|+|||++.. ...|. ........++|+|.+.... .|.....+. .+..+. + ...+.++.....|.. .....
T Consensus 281 ~~~g~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~~-~P~~~~~~~-~~~~~~-~-~~~l~p~~~~~~p~~~~~~~~ 355 (559)
T 2q9o_A 281 RAPDNYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPGG-LPTDEGTPP-VDHQCL-D-TLDVRPVVPRSVPVNSFVKRP 355 (559)
T ss_dssp SCSSEEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCCS-CCCCCCCCC-CCCTTC-C-CSCCCBSSCCBCCCTTCCCCG
T ss_pred CCCCcEEEEEEeccccccC-CCCCCceeEEEEECCCCCC-CCCCCCCcC-CCcccc-c-ccccccCCCCCCCCcccccce
Confidence 877999999987 33332 1223456899999875432 111111110 110000 0 012222211111100 11122
Q ss_pred ceEEEEEeccCCCCCCccCCCceEEEeecCccccCC-ChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCccc
Q 013875 229 DRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMP-QTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSR 307 (434)
Q Consensus 229 ~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p-~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 307 (434)
++++.+..... +.+...|+|||++|..+ ..|+|.+.+.+.+ ++ ..
T Consensus 356 ~~~~~~~~~~~--------~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~-----~~---------------------~~ 401 (559)
T 2q9o_A 356 DNTLPVALDLT--------GTPLFVWKVNGSDINVDWGKPIIDYILTGNT-----SY---------------------PV 401 (559)
T ss_dssp GGEEEEEEECS--------SSSSCEEEETTBCCCCCTTSCHHHHHHHTCC-----CC---------------------CG
T ss_pred eEEEEEEeecC--------CCceEEEEECCEecccCCCCCcHhHhhcCCc-----cC---------------------CC
Confidence 34555443211 11345799999999765 5677766543310 11 12
Q ss_pred ceeeeEeec-CCeEEEEEEeCCC-CCCCCCCccccCCceEEEEecC---------CcCCCCCCCCCCCCCCCCccceeEe
Q 013875 308 ATRLSKIAF-NSTIELVLQDTNL-LTVESHPFHLHGYNFFVVGTGI---------GNFDPVKYPANYNLVDPIERNTAAV 376 (434)
Q Consensus 308 ~~~~~~~~~-g~~v~~vl~N~~~-~~~~~HP~HlHG~~F~Vl~~g~---------g~~~~~~~~~~~n~~~p~~rDTv~v 376 (434)
+..++.++. +++++|+++|... ...+.||||||||+||||+++. |.|++.++...+|+.+|+|||||.|
T Consensus 402 ~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~V 481 (559)
T 2q9o_A 402 SDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTML 481 (559)
T ss_dssp GGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEE
T ss_pred CceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEc
Confidence 345567765 5677888888531 0157999999999999999987 6665432235688899999999999
Q ss_pred cCCcEEEEEEEcCCceeeEEeecchhhHHccceeEEEEecCC
Q 013875 377 PTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418 (434)
Q Consensus 377 p~~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~~~~ 418 (434)
+++||++|||+|||||.|||||||+||++.|||++|.|..++
T Consensus 482 p~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~ 523 (559)
T 2q9o_A 482 PAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPAD 523 (559)
T ss_dssp CTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHH
T ss_pred cCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcch
Confidence 999999999999999999999999999999999999987543
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=4.7e-62 Score=496.91 Aligned_cols=307 Identities=20% Similarity=0.247 Sum_probs=228.4
Q ss_pred cCCCceEEeccC----CCcccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccCC----------CCCC
Q 013875 5 SKSKARKWVCHR----TCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFG----------FLAL 70 (434)
Q Consensus 5 ~~~Gt~wYH~H~----~~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 70 (434)
+++||||||||. +.|+.+ ||+|+|||.++... ......+ .+.. ++++|+..+... ....
T Consensus 104 ~~~GT~wYH~H~~~~t~~q~~~---Gl~G~liV~~~~~~-~~~~~~~-~e~~--l~l~D~~~~~~~~~~~~~~~~~~g~~ 176 (439)
T 2xu9_A 104 ELAGTFWYHPHLHGRVAPQLFA---GLLGALVVESSLDA-IPELREA-EEHL--LVLKDLALQGGRPAPHTPMDWMNGKE 176 (439)
T ss_dssp SCCEEEEEECCCTTSHHHHHHT---TCCEEEEECCGGGG-SHHHHTS-EEEE--EEEEEECEETTEECCCCHHHHHHCCC
T ss_pred CCCcceEeccCCCCchHHHHHh---hCeEEEEEcCcccc-CccCCCC-CcEE--EEEEeeeeCCCCcCCCCccccccCCC
Confidence 589999999997 468888 99999997665421 1111111 1111 233443332110 0135
Q ss_pred CCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCccc-CCeeeeEEEeCCCCeEEEEEE
Q 013875 71 NPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-KPFTTEAILIAPGQTTNVLVQ 149 (434)
Q Consensus 71 ~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~-~p~~~~~~~l~~geR~dv~v~ 149 (434)
++.++|||+. .+.++|++| +|||||||+|+.+.+.|+|+||+|+|||.||+++ +|+.++++.|+|||||||+|+
T Consensus 177 ~~~~~iNG~~----~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~ 251 (439)
T 2xu9_A 177 GDLVLVNGAL----RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVR 251 (439)
T ss_dssp CSEEEETTEE----SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEE
T ss_pred CCEEEECCcc----CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEE
Confidence 7899999994 589999999 9999999999999999999999999999999998 899999999999999999999
Q ss_pred eCCCCCceEEEEeccCCCCCC--------------CCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccC
Q 013875 150 ANQKPGRYFMAARPFNDAPIP--------------VDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSL 215 (434)
Q Consensus 150 ~~~~~g~~~l~a~~~~~~~~~--------------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l 215 (434)
+++ +|+|+|++..+..+... .......++|+|.+.... ..+|. .+.++
T Consensus 252 ~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~p~---------------~l~~~ 313 (439)
T 2xu9_A 252 LRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP--LPLPK---------------ALSPF 313 (439)
T ss_dssp CCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--CCCCS---------------CCCCC
T ss_pred cCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--ccCcc---------------cCCCc
Confidence 998 69999999765443210 012346788999765321 11111 01111
Q ss_pred CCCCCCCCCCcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCC
Q 013875 216 NSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYT 295 (434)
Q Consensus 216 ~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~ 295 (434)
. +.+ .+ ..++++.+..+.. ...|+|||++|..+.
T Consensus 314 ~--~l~--~~-~~~r~~~l~~~~~-----------g~~~~iNg~~~~~~~------------------------------ 347 (439)
T 2xu9_A 314 P--TLP--AP-VVTRRLVLTEDMM-----------AARFFINGQVFDHRR------------------------------ 347 (439)
T ss_dssp C--CCC--CC-SEEEEEEEEEEGG-----------GTEEEETTBCCCTTC------------------------------
T ss_pred c--cCC--CC-CcceEEEEEeecc-----------CceEeECCEECCCCC------------------------------
Confidence 0 011 11 2246666665431 125899999885321
Q ss_pred CCCCCCCCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeE
Q 013875 296 GAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAA 375 (434)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~ 375 (434)
..+.++.|++++|+|+|.+ .+.||||||||+||||+++.+.+ .+|+|||||.
T Consensus 348 --------------~~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~F~Vl~~~g~~~-----------~~p~~rDTv~ 399 (439)
T 2xu9_A 348 --------------VDLKGQAQTVEVWEVENQG---DMDHPFHLHVHPFQVLSVGGRPF-----------PYRAWKDVVN 399 (439)
T ss_dssp --------------CCEEECTTCEEEEEEEECS---SSCEEEEESSCCBEEEEETTEEC-----------SSCCCBSEEE
T ss_pred --------------CceecCCCCEEEEEEEcCC---CCCCCceeCCCcEEEEeeCCCCC-----------CCCCCeEEEE
Confidence 1167889999999999975 68999999999999999975442 3689999999
Q ss_pred ecCCcEEEEEEEcCCceeeEEeecchhhHHccceeEEEEe
Q 013875 376 VPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 376 vp~~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
|++++|++|||++||||.|+|||||+||++.|||++|+|.
T Consensus 400 v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 400 LKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp ECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred eCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 9999999999999999999999999999999999999873
No 10
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=1.3e-60 Score=495.54 Aligned_cols=328 Identities=17% Similarity=0.215 Sum_probs=228.9
Q ss_pred CcccC-CCceEEeccCCC----cccCCCCCCCcceEEecCChhHHH--HhhhccCcchHHHHHHhhhhccCC--------
Q 013875 2 LKRSK-SKARKWVCHRTC----QMHTQSTGSQGPSFHVLRNVRKLS--KLLEKTSSLGIDIIYSNLLKNSFG-------- 66 (434)
Q Consensus 2 ~~~~~-~Gt~wYH~H~~~----q~~~~~~Gl~G~liv~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~-------- 66 (434)
|++.| +||||||||... |+.+ ||+|+|||.++....+. .-+.+ .+. .++++++..+..+
T Consensus 122 f~~~~~~GT~WYH~H~~~~t~~q~~~---Gl~G~liV~~~~~~~~~lp~~~~~-~d~--~l~l~d~~~~~~g~~~~~~~~ 195 (534)
T 3abg_A 122 YPNRQSARTLWYHDHAMHITAENAYR---GQAGLYMLTDPAEDALNLPSGYGE-FDI--PMILTSKQYTANGNLVTTNGE 195 (534)
T ss_dssp ECCCSSSCEEEEEECCTTCHHHHHHT---BCEEEEEEECTTTTTSCTTCCHHH-HSC--CEEEEEECBCSSSCBCCCTTC
T ss_pred EecCCcceeEEEecCccccchhhhhh---cceEEEEEECCcccccCCCccCCc-ceE--EEEEeeeeecCCCceeccCCC
Confidence 56666 789999999854 5556 99999998886543211 00000 011 1244554433221
Q ss_pred -CCCCCCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcC-------CeeEEEEeCCccc-CCeeeeEEE
Q 013875 67 -FLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAG-------HNFTVVEVDAVYT-KPFTTEAIL 137 (434)
Q Consensus 67 -~~~~~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g-------~~~~via~DG~~~-~p~~~~~~~ 137 (434)
....+|.+||||+. .+.+.|++ ++|||||||+|+.+.+.|+|++ |+|+|||+||+++ +|+.+++|.
T Consensus 196 ~~~~~gd~~lvNG~~----~p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~ 270 (534)
T 3abg_A 196 LNSFWGDVIHVNGQP----WPFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLY 270 (534)
T ss_dssp SSCCCCSEEEETTEE----SCBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEE
T ss_pred CccccCceeccCCcc----CceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEE
Confidence 12357999999995 47889998 5999999999999999999987 9999999999865 999999999
Q ss_pred eCCCCeEEEEEEeCCCCC-ceEEEEeccCC-CCC-CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhcccc
Q 013875 138 IAPGQTTNVLVQANQKPG-RYFMAARPFND-API-PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRS 214 (434)
Q Consensus 138 l~~geR~dv~v~~~~~~g-~~~l~a~~~~~-~~~-~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~ 214 (434)
|+|||||||+|++++.+| +|+|++..... |.+ ..+.....++++|........+.....| ..++.
T Consensus 271 l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P------------~~L~~ 338 (534)
T 3abg_A 271 ISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP------------ANLRD 338 (534)
T ss_dssp ECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC------------CCCCC
T ss_pred ECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc------------ccccc
Confidence 999999999999998667 69999854221 111 0111235688999754332100000011 12222
Q ss_pred CCCCCCCCCCCcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCC
Q 013875 215 LNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNY 294 (434)
Q Consensus 215 l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~ 294 (434)
+.. |. .+...++++.+ +. ....|+|||++|..+..|
T Consensus 339 ~~~---p~-~~~~~~~~~~~--~~-----------~~~~w~iNG~~f~~~~~p--------------------------- 374 (534)
T 3abg_A 339 VPF---PS-PTTNTPRQFRF--GR-----------TGPTWTINGVAFADVQNR--------------------------- 374 (534)
T ss_dssp CSC---CC-CCCCCCEEEEC--SC-----------CCSTTCCCCBTTBCTTSC---------------------------
T ss_pred CCC---CC-CccccceEEEE--ec-----------cCceeEECCcccCCCCCc---------------------------
Confidence 211 11 12233454433 21 112489999998533210
Q ss_pred CCCCCCCCCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCcccee
Q 013875 295 TGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTA 374 (434)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv 374 (434)
..+.++.|++++|+|+|.+ ..+.||||||||+||||+++.|.+. ....++.+ .|||||
T Consensus 375 ---------------~l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~Vl~~~~g~~~----~~~~~~~~-~~rDTV 432 (534)
T 3abg_A 375 ---------------LLANVPVGTVERWELINAG--NGWTHPIHIHLVDFKVISRTSGNNA----RTVMPYES-GLKDVV 432 (534)
T ss_dssp ---------------CCCEECTTCEEEEEEEECS--SSCCCCEEESSCCEEEEEESSCCSS----SCCCSGGG-SCBSEE
T ss_pred ---------------ceeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEEEEEEcCCCCc----CcCCcccc-CCcCeE
Confidence 1146788999999999965 2469999999999999999655432 11234455 899999
Q ss_pred EecCCcEEEEEEE-cCCceeeEEeecchhhHHccceeEEEEecCC
Q 013875 375 AVPTGGWTAIRFR-ADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418 (434)
Q Consensus 375 ~vp~~g~v~irf~-adnpG~w~~HCHil~H~d~GM~~~~~v~~~~ 418 (434)
.|+|+++++|||+ +||||.|+|||||+||++.|||++|.|...+
T Consensus 433 ~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 433 WLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp CCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 9999999999999 8999999999999999999999999998765
No 11
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1.2e-59 Score=487.71 Aligned_cols=333 Identities=16% Similarity=0.147 Sum_probs=224.6
Q ss_pred Ccc-cCCCceEEeccCC----CcccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccC-----------
Q 013875 2 LKR-SKSKARKWVCHRT----CQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSF----------- 65 (434)
Q Consensus 2 ~~~-~~~Gt~wYH~H~~----~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------- 65 (434)
|++ +++||||||||.. .|+.+ ||+|+|||.++....+. +.....+. .++++|+..+..
T Consensus 141 f~~~~~~GT~wYH~H~~~~t~~q~~~---Gl~G~liV~~~~~~~~~-lp~~d~d~--~l~l~D~~~~~~~~~~~~~~~~~ 214 (513)
T 2wsd_A 141 YPNQQRGAILWYHDHAMALTRLNVYA---GLVGAYIIHDPKEKRLK-LPSDEYDV--PLLITDRTINEDGSLFYPSAPEN 214 (513)
T ss_dssp ECCCSCCEEEEEEECCTTTHHHHHHH---TCEEEEEEECGGGGGGC-CCCGGGEE--EEEEEEEEECTTSCEECCSSCSS
T ss_pred EecCCCccceEECCCCCCcchhhhhc---cCeEEEEEecccccccc-CCCCCCcE--EEEEEeeecCCCCceeccccccc
Confidence 455 4799999999984 36777 99999998775543211 00000111 123444322110
Q ss_pred ----------CCCCCCCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCC-eeEEEEeCCccc-CCeee
Q 013875 66 ----------GFLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGH-NFTVVEVDAVYT-KPFTT 133 (434)
Q Consensus 66 ----------~~~~~~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~-~~~via~DG~~~-~p~~~ 133 (434)
.....+|.+||||+. .+.++|++| +|||||||+|+.+.+.|+|+|| +|+|||+||+++ +|+.+
T Consensus 215 ~~~~~~~~~~~~~~~~d~~liNG~~----~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~ 289 (513)
T 2wsd_A 215 PSPSLPNPSIVPAFCGETILVNGKV----WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKL 289 (513)
T ss_dssp CCTTSCSSCCCSCCCCSEEEETTEE----SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEE
T ss_pred ccccccccccccccccceEEECCcc----cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEe
Confidence 112457999999995 478999985 8999999999999999999999 999999999998 89999
Q ss_pred eEEEeCCCCeEEEEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccc
Q 013875 134 EAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLR 213 (434)
Q Consensus 134 ~~~~l~~geR~dv~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~ 213 (434)
+++.|+|||||||+|++++.+|++ ++......|..........++|+|......+.+.....|. .+.
T Consensus 290 ~~l~l~pgeR~dvlv~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~------------~l~ 356 (513)
T 2wsd_A 290 NSFSLAPAERYDIIIDFTAYEGES-IILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPK------------YLA 356 (513)
T ss_dssp SEEEECTTCEEEEEEECGGGTTCE-EEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCS------------BCS
T ss_pred CeEEECCeeeEEEEEECCCCCCcE-EEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCc------------ccc
Confidence 999999999999999999866763 3322222221111222346889997653211111111111 011
Q ss_pred cCCCCCCCCCCCcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCC
Q 013875 214 SLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFN 293 (434)
Q Consensus 214 ~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~ 293 (434)
.+. ..+. .+...++++.+...+... +...|+|||++|..+.
T Consensus 357 ~~~--~~~~-~~~~~~~~~~l~~~~~~~--------g~~~~~iNg~~~~~~~---------------------------- 397 (513)
T 2wsd_A 357 SYP--SVQH-ERIQNIRTLKLAGTQDEY--------GRPVLLLNNKRWHDPV---------------------------- 397 (513)
T ss_dssp CCG--GGCC-CCEEEEEEEEEEEEECTT--------SCEEEEETTBCTTSCC----------------------------
T ss_pred CCC--Cccc-CCCcceEEEEEEeecCCC--------CCceEeECCccCCCcc----------------------------
Confidence 100 0010 112335666555433221 2346889999874221
Q ss_pred CCCCCCCCCCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCC---cCCCCC------CCCCCC
Q 013875 294 YTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIG---NFDPVK------YPANYN 364 (434)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g---~~~~~~------~~~~~n 364 (434)
.+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+ .|++.. .+....
T Consensus 398 -----------------~~~~~~g~~~~w~l~N~~---~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (513)
T 2wsd_A 398 -----------------TETPKVGTTEIWSIINPT---RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPP 457 (513)
T ss_dssp -----------------CBCCBTTCEEEEEEEECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCC
T ss_pred -----------------cEecCCCCEEEEEEEcCC---CCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCC
Confidence 145778999999999965 679999999999999999742 222110 000112
Q ss_pred CCCCCccceeEecCCcEEEEEEEc-CCceeeEEeecchhhHHccceeEEEEecC
Q 013875 365 LVDPIERNTAAVPTGGWTAIRFRA-DNPGVWFMHCHLELHTGWGLKTAFAVEDG 417 (434)
Q Consensus 365 ~~~p~~rDTv~vp~~g~v~irf~a-dnpG~w~~HCHil~H~d~GM~~~~~v~~~ 417 (434)
..++.|||||.|+|+++++|+|++ ||||.|+|||||+||++.|||++|+|.+.
T Consensus 458 ~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 458 PSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp GGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred ccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 234569999999999999999999 89999999999999999999999999753
No 12
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=5.1e-60 Score=482.06 Aligned_cols=315 Identities=17% Similarity=0.257 Sum_probs=227.2
Q ss_pred Cccc-CCCceEEecc----CCCcccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccCC----------
Q 013875 2 LKRS-KSKARKWVCH----RTCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFG---------- 66 (434)
Q Consensus 2 ~~~~-~~Gt~wYH~H----~~~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------- 66 (434)
|++. ++|||||||| .+.|+.+ ||+|+|||.+++.. +..-++ ..+.. ++++|+..+. +
T Consensus 91 f~~~~~~GT~wYH~H~~~~~~~q~~~---Gl~G~liV~~~~~~-~~l~~d-~~e~~--l~l~D~~~~~-~~~~~~~~~~~ 162 (448)
T 3aw5_A 91 FDVVNRAGTYLYHPHPHGLTAKQFYM---GQLGLVIVEDSGSD-LGFKYG-VNDLP--LVISDRRFIG-GAPVYNPTPME 162 (448)
T ss_dssp EECCSCSEEEEEEECCTTTHHHHHHT---TCCEEEEEECTTTT-TTCCBT-TTEEE--EEEEEEEEET-TEEECCCCHHH
T ss_pred EEcCCCCCceEeccCCCCchHHHHhc---cceEEEEEeCCccc-cCCCCC-CceEE--EEEEeeccCC-Ccccccccccc
Confidence 5666 7999999999 6788888 99999998876544 100011 11111 2444443322 1
Q ss_pred --CCCCCCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEE--cC---CeeEEEEeCCcccC-CeeeeEEEe
Q 013875 67 --FLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAI--AG---HNFTVVEVDAVYTK-PFTTEAILI 138 (434)
Q Consensus 67 --~~~~~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i--~g---~~~~via~DG~~~~-p~~~~~~~l 138 (434)
....+|.+||||+. .+.++|++| +|||||||+|+.+.+.|+| +| |+|+|||+||++++ |+.++++.|
T Consensus 163 ~~~~~~~~~~liNG~~----~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l 237 (448)
T 3aw5_A 163 MIAGFLGNAVLVNGVK----DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFL 237 (448)
T ss_dssp HHHCCCCSEEEETTEE----TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEE
T ss_pred cccCccccEEEECCcc----cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEE
Confidence 12467999999995 589999999 9999999999999999999 99 99999999999997 999999999
Q ss_pred CCCCeEEEEEEeCCCCCceEEEEeccCCCCCC----------CCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhh
Q 013875 139 APGQTTNVLVQANQKPGRYFMAARPFNDAPIP----------VDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNY 208 (434)
Q Consensus 139 ~~geR~dv~v~~~~~~g~~~l~a~~~~~~~~~----------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~ 208 (434)
+|||||||+|++++ +.|||++.....+.+. .......++++|.+...... | .
T Consensus 238 ~pgeR~dvlv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p---~---------- 299 (448)
T 3aw5_A 238 APAERAEVVVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP---V---E---------- 299 (448)
T ss_dssp CTTCEEEEEEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC---C---C----------
T ss_pred CCcceEEEEEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC---c---c----------
Confidence 99999999999984 6899999876543210 11234577888865432211 1 0
Q ss_pred hhccccCCCCCCCCCCCcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCC
Q 013875 209 NKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKP 288 (434)
Q Consensus 209 ~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~ 288 (434)
.|..+... ..+...++++.+..+ ...|+|||++|..++
T Consensus 300 --~L~~lp~~----~~~~~~~~~~~l~~~-------------~~~~~iNg~~~~~~~----------------------- 337 (448)
T 3aw5_A 300 --ALSDPPPE----PPKPTRTRRFALSLS-------------GMQWTINGMFWNASN----------------------- 337 (448)
T ss_dssp --CCSCCCCC----CCCCSEEEEEEEEEE-------------TTEEEETTBCCCTTC-----------------------
T ss_pred --ccCCCCCC----CCCCCceEEEEEeCC-------------CceeeECCCcCCCCC-----------------------
Confidence 11111100 122334566655432 124999999885321
Q ss_pred CCCCCCCCCCCCCCCCcccceeeeE-eecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCC----
Q 013875 289 PKPFNYTGAPLTASLGTSRATRLSK-IAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANY---- 363 (434)
Q Consensus 289 p~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~---- 363 (434)
..+. ++.|++|+|+|+|.+ ..+.||||||||+||||+++ |.+........+
T Consensus 338 ---------------------p~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~ 393 (448)
T 3aw5_A 338 ---------------------PLFEHVSVEGVELWEIVNDK--ASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGR 393 (448)
T ss_dssp ---------------------TTCCCEEECEEEEEEEEECS--SSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCC
T ss_pred ---------------------CceeccCCCCeEEEEEEcCC--CCCCcCEEECCceEEEEEec-CCCcccccccccccCC
Confidence 1145 789999999999964 25799999999999999995 443211111122
Q ss_pred CCCCCCccceeEecCCcEEEEE--EE---cCCceeeEEeecchhhHHccceeEEEEe
Q 013875 364 NLVDPIERNTAAVPTGGWTAIR--FR---ADNPGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 364 n~~~p~~rDTv~vp~~g~v~ir--f~---adnpG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
+..+|.|||||.|+|+++++|+ |+ +||| |+|||||+||++.|||++|+|+
T Consensus 394 ~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 394 LPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp CGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred CccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 3345689999999999999665 98 8999 9999999999999999999874
No 13
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=5.7e-60 Score=482.37 Aligned_cols=312 Identities=16% Similarity=0.165 Sum_probs=224.8
Q ss_pred CcccC-CCceEEeccC----CCcccCCCCCCCcceEEecCChhHH--HHhhhccCcchHHHHHHhhhhccCC--------
Q 013875 2 LKRSK-SKARKWVCHR----TCQMHTQSTGSQGPSFHVLRNVRKL--SKLLEKTSSLGIDIIYSNLLKNSFG-------- 66 (434)
Q Consensus 2 ~~~~~-~Gt~wYH~H~----~~q~~~~~~Gl~G~liv~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~-------- 66 (434)
|++.| +||||||||. +.|+.+ ||+|+|||.+++...+ ...+.+ .+. .++++|+..+..+
T Consensus 103 f~~~~~~GT~wYH~H~~~~t~~q~~~---Gl~G~liV~~~~~~~~~~p~~y~~-~e~--~l~l~D~~~~~~~~~~~~~~~ 176 (451)
T 2uxt_A 103 LPIRQNAATLWYHANTPNRTAQQVYN---GLAGMWLVEDEVSKSLPIPNHYGV-DDF--PVIIQDKRLDNFGTPEYNEPG 176 (451)
T ss_dssp EECCSCSEEEEEEECCTTTHHHHHHT---TCEEEEEEECHHHHHSSSCCCBTT-TEE--EEEEEEEEECTTSCEECCCCS
T ss_pred EEcCCCCcceEEecCCCCchhhhHhh---cceEEEEEecCcccccCCCccCCC-ceE--EEEEEeeecCCCCceeccccc
Confidence 56676 9999999998 678888 9999999876543221 111111 111 1345555443211
Q ss_pred -CCCCCCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEE-cCCeeEEEEeCCccc-CCeeeeEEEeCCCCe
Q 013875 67 -FLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAI-AGHNFTVVEVDAVYT-KPFTTEAILIAPGQT 143 (434)
Q Consensus 67 -~~~~~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i-~g~~~~via~DG~~~-~p~~~~~~~l~~geR 143 (434)
....+|.+||||+. .+.++|++| +|||||||+|+.+.+.|+| +||+|+|||+||+++ +|+.++++.|+||||
T Consensus 177 ~~~~~~d~~liNG~~----~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR 251 (451)
T 2uxt_A 177 SGGFVGDTLLVNGVQ----SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGER 251 (451)
T ss_dssp SSCCCCSEEEETTEE----SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCE
T ss_pred CCCCcCCEEEECCcc----cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeE
Confidence 23568999999995 478999999 9999999999999999999 899999999999998 899999999999999
Q ss_pred EEEEEEeCCCCCceEEEEeccCCCCCC-------CCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCC
Q 013875 144 TNVLVQANQKPGRYFMAARPFNDAPIP-------VDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLN 216 (434)
Q Consensus 144 ~dv~v~~~~~~g~~~l~a~~~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~ 216 (434)
|||+|++++. ++|||++.....+.+. .+.....++++|.+....+.+ ....|. .|.++.
T Consensus 252 ~dvlv~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-~~~~p~------------~L~~~~ 317 (451)
T 2uxt_A 252 REILVDMSNG-DEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-TDSLPM------------RLLPTE 317 (451)
T ss_dssp EEEEEECTTC-CCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS------------CSSSSC
T ss_pred EEEEEEeCCC-CEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc-cccCcc------------ccCCCC
Confidence 9999999974 8999998754332110 112335688999765422111 011111 122221
Q ss_pred CCCCCCCCCcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCC
Q 013875 217 SPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTG 296 (434)
Q Consensus 217 ~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~ 296 (434)
.. + .+...++++ .++ . .|+|||++|..++
T Consensus 318 ~~--~--~~~~~~~~~--~l~------------~--~~~iNg~~f~~~~------------------------------- 346 (451)
T 2uxt_A 318 IM--A--GSPIRSRDI--SLG------------D--DPGINGQLWDVNR------------------------------- 346 (451)
T ss_dssp CC--C--CCCSEEEEE--EEC------------S--SSSBTTBCCCTTC-------------------------------
T ss_pred CC--C--CCCcceEEE--EEe------------e--EEEECCEeCCCCC-------------------------------
Confidence 11 1 112223333 321 1 4889999885321
Q ss_pred CCCCCCCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEe
Q 013875 297 APLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAV 376 (434)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~v 376 (434)
..+.++.|++|+|+|+|. +.||||||||+||||+++ |. .+++.+|.|||||.|
T Consensus 347 -------------~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~-G~--------~~~~~~p~~rDTv~v 399 (451)
T 2uxt_A 347 -------------IDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVN-GA--------MPFPEDRGWKDTVWV 399 (451)
T ss_dssp -------------CCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEET-TB--------CCCGGGSSCBSEEEE
T ss_pred -------------CcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeC-Cc--------CCCcccCCCccEEEE
Confidence 126789999999999994 589999999999999996 22 245678999999999
Q ss_pred cCCcEEEEEEEcCCcee----eEEeecchhhHHccceeEEEEecCC
Q 013875 377 PTGGWTAIRFRADNPGV----WFMHCHLELHTGWGLKTAFAVEDGP 418 (434)
Q Consensus 377 p~~g~v~irf~adnpG~----w~~HCHil~H~d~GM~~~~~v~~~~ 418 (434)
+++++|+|+|||||. |||||||++|+|.|||++|+|.+.+
T Consensus 400 --g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 400 --DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp --EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred --CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 899999999999988 9999999999999999999998764
No 14
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.9e-57 Score=464.49 Aligned_cols=320 Identities=17% Similarity=0.224 Sum_probs=221.8
Q ss_pred CcccC--CCceEEeccC----CCcccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccCCC--------
Q 013875 2 LKRSK--SKARKWVCHR----TCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGF-------- 67 (434)
Q Consensus 2 ~~~~~--~Gt~wYH~H~----~~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 67 (434)
|++.| +||||||||. +.|+.+ ||+|+|||.+++...+ + ++ ..+ ++++|+..+..+.
T Consensus 135 f~~~~~~~GT~WYH~H~~~~t~~q~~~---GL~G~lIV~~~~~~~~-~-~~--~~~---l~l~D~~~~~~g~~~~~~~~~ 204 (481)
T 3zx1_A 135 FEIPQDSAGTYWYHPHPHYTASKQVFM---GLAGAFVIKAKKDALS-H-LK--EKD---LMISDLRLDENAQIPNNNLND 204 (481)
T ss_dssp EECCTTCCEEEEEECCCTTTHHHHHHT---TCCEEEEEECSSCTTT-T-SE--EEE---EEEEEECCBTTSCCCCCCHHH
T ss_pred EeCCCCCCceEEEeecCCCcchhhhhc---cceEEEEEcCcccccc-C-CC--cee---EEEEEEeccCCCccccccchh
Confidence 55655 8999999996 578888 9999999887654321 1 11 111 2344444433221
Q ss_pred ---CCCCCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCccc-CCeeeeEEEeCCCCe
Q 013875 68 ---LALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-KPFTTEAILIAPGQT 143 (434)
Q Consensus 68 ---~~~~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~-~p~~~~~~~l~~geR 143 (434)
...+|.+||||+. .+.++|++|+ ||||||+|+.+.+.|+|+||+|+|||+||+++ +|+.++++.|+||||
T Consensus 205 ~~~g~~gd~~lvNG~~----~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR 278 (481)
T 3zx1_A 205 WLNGREGEFVLINGQF----KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASR 278 (481)
T ss_dssp HHHCCCCSEEEETTEE----SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCE
T ss_pred hccCCcCCEEEECCcc----CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccE
Confidence 1357999999994 5799999998 99999999999999999999999999998877 899999999999999
Q ss_pred EEEEEEeCCCCCceEEEEeccCCCCCCC-CCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCC
Q 013875 144 TNVLVQANQKPGRYFMAARPFNDAPIPV-DNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPA 222 (434)
Q Consensus 144 ~dv~v~~~~~~g~~~l~a~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~ 222 (434)
|||+|++++. ++|.|.+...+...... .......++++...... ..+|. .+..+.. .
T Consensus 279 ~dvlv~~~~~-~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~lP~---------------~l~~~~~--~-- 336 (481)
T 3zx1_A 279 VEVLIDAPKD-GNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN--VELPK---------------NLKIFKP--S-- 336 (481)
T ss_dssp EEEEEECSSC-EEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC--CCCCS---------------CSCCCCC--C--
T ss_pred EEEEEEcCCC-cEEEEEEecccccCccccCCCCceeEEEEecCCCC--ccCCc---------------cccCCCC--C--
Confidence 9999999974 78999876544321111 11223445554432211 11111 1111110 0
Q ss_pred CCCcccceEEEEEeccCCCCCCccCCCce------EEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCC
Q 013875 223 DVPQKVDRKLFYTIGFGKDSCPTCVNGTR------LLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTG 296 (434)
Q Consensus 223 ~~p~~~~~~~~l~~~~~~~~~~~~~g~~~------~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~ 296 (434)
+.+ ..++++.+..+..........+... ..|+|||+.|...
T Consensus 337 ~~~-~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~-------------------------------- 383 (481)
T 3zx1_A 337 EEP-KEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLK-------------------------------- 383 (481)
T ss_dssp CCC-CEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTT--------------------------------
T ss_pred CCC-CcEEEEEEeccchhcccccccccccccccccceeEECCEeCCCC--------------------------------
Confidence 111 1345555443211000000000000 1388998876321
Q ss_pred CCCCCCCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEec-CCcCCCCCCCCCCCCCCCCccceeE
Q 013875 297 APLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTG-IGNFDPVKYPANYNLVDPIERNTAA 375 (434)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g-~g~~~~~~~~~~~n~~~p~~rDTv~ 375 (434)
...+.++.|++|+|+|.|.+ .+.|||||||++|+|+++. .|.. ....++.|||||.
T Consensus 384 ------------~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl~~~~~g~~--------~~~~~~~~kDTv~ 440 (481)
T 3zx1_A 384 ------------RIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELISSKLNGKV--------QKAEFRALRDTIN 440 (481)
T ss_dssp ------------CCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEEEEEETTEE--------EECSSCCEESEEE
T ss_pred ------------CceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEEEecccCCC--------CCcccCcccceEE
Confidence 12378999999999999964 7899999999999999982 1211 1123578999999
Q ss_pred ecCCcEEEEEEEcCCceeeEEeecchhhHHccceeEEEEe
Q 013875 376 VPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 376 vp~~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
|+|+++++|+|+|||||.|+|||||++|+|.|||++|+|+
T Consensus 441 v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 441 VRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp ECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred ECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 9999999999999999999999999999999999999986
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=8.6e-58 Score=485.24 Aligned_cols=364 Identities=15% Similarity=0.173 Sum_probs=214.8
Q ss_pred CcccC-CCceEEeccC----CCcccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccC-----------
Q 013875 2 LKRSK-SKARKWVCHR----TCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSF----------- 65 (434)
Q Consensus 2 ~~~~~-~Gt~wYH~H~----~~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------- 65 (434)
|+..| +||||||||. +.|+.+ ||+|+|||.++....+.. .....+. .++++|+..+..
T Consensus 159 f~~~q~~GT~WYHsH~~g~t~~q~~~---Gl~G~liI~d~~~~~~~~-p~~d~e~--~lvl~Dw~~~~~~~~~~~~~~~~ 232 (612)
T 3gyr_A 159 YPNDHQATQWWYHDHAMNITRWNVMA---GLYGTYLVRDDEEDALGL-PSGDREI--PLLIADRNLDTDEDGRLNGRLLH 232 (612)
T ss_dssp ECCCSCSEEEEEEECCTTTHHHHTTT---TCEEEEEEECHHHHTTTC-CCGGGEE--EEEEEEECEEECTTSCEEEEEEE
T ss_pred EEcCCCCceEEEeeCCCCcchhhhhc---cceeEEEEcCccccccCC-CCCCccE--EEEEEEEeccccccccccccccc
Confidence 45554 6899999997 568888 999999987654432211 0000111 124444432110
Q ss_pred ----------------CCCCCCCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCC-------eeEEEE
Q 013875 66 ----------------GFLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGH-------NFTVVE 122 (434)
Q Consensus 66 ----------------~~~~~~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~-------~~~via 122 (434)
.....+|.++|||+. .+.+.|++ ++|||||||+|+.+.++|+|++| +|+|||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~----~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa 307 (612)
T 3gyr_A 233 KTVIVQQSNPETGKPVSIPFFGPYTTVNGRI----WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG 307 (612)
T ss_dssp EEEEEESSCSSSSCCEECCCCCSEEEETTEE----SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE
T ss_pred CCccccccCCCCCCccccCccCceeeecCCc----cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEE
Confidence 012357899999994 57888875 58999999999999999999998 499999
Q ss_pred eCCccc-CCeee------eEEEeCCCCeEEEEEEeCCCCCceEE-EEeccCCCCC---CCCCcceEEEEEEcCCCCCCC-
Q 013875 123 VDAVYT-KPFTT------EAILIAPGQTTNVLVQANQKPGRYFM-AARPFNDAPI---PVDNKTATGILQYKGIPNSLL- 190 (434)
Q Consensus 123 ~DG~~~-~p~~~------~~~~l~~geR~dv~v~~~~~~g~~~l-~a~~~~~~~~---~~~~~~~~ail~y~~~~~~~~- 190 (434)
+||+++ +|+++ +.|.|+|||||||+|++++..|.++. +......+.. .........+++|........
T Consensus 308 ~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
T 3gyr_A 308 SDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEED 387 (612)
T ss_dssp ETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCC
T ss_pred eCCCccccceeccCcccccEEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCC
Confidence 999998 56655 48999999999999999997665443 3332111111 011223456677754332211
Q ss_pred -CCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccceEEEEEeccCCCCCCccCCCceEEEeecCcc----ccCCC
Q 013875 191 -PTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNIS----FVMPQ 265 (434)
Q Consensus 191 -~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~s----f~~p~ 265 (434)
..++....... ... ....+. ..+...+....... .......+.+.... +..+.
T Consensus 388 ~~~~p~~~~~~~-----------~~~-----~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 445 (612)
T 3gyr_A 388 SFALPEVLSGSF-----------RRM-----SHDIPH-GHRLIVLTPPGTKG-----SGGHPEIWEMAEVEDPADVQVPA 445 (612)
T ss_dssp CCCCCSSCCSSC-----------CCC-----CTTSCC-EEEEEEEECTTCTT-----TTTCCEEEEEEECC-----CCSC
T ss_pred cccccccccccc-----------ccc-----cccccc-cccccccccccccc-----ccccccccccccccccccccccc
Confidence 11111100000 000 000000 01111111000000 00000111111110 00000
Q ss_pred hhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceE
Q 013875 266 TALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFF 345 (434)
Q Consensus 266 ~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~ 345 (434)
. +.+.....+..+..+..++ ....+...+.++.|++|+|+|+|.+ .+.||||||||+||
T Consensus 446 ~-----------~~~~~~~~~~~~~~~~~n~-------~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~ 504 (612)
T 3gyr_A 446 E-----------GVIQVTGADGRTKTYRRTA-------RTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQ 504 (612)
T ss_dssp T-----------TEEEEECTTSCEEEEEEEE-------CSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEE
T ss_pred c-----------ceeeeccCCCccccccccC-------ccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEE
Confidence 0 0000000000000011111 0111234578999999999999975 68999999999999
Q ss_pred EEEecCCcCCCCC---------------CCCCCCCCCCCccceeEecCCcEEEEEEE-cCCceeeEEeecchhhHHccce
Q 013875 346 VVGTGIGNFDPVK---------------YPANYNLVDPIERNTAAVPTGGWTAIRFR-ADNPGVWFMHCHLELHTGWGLK 409 (434)
Q Consensus 346 Vl~~g~g~~~~~~---------------~~~~~n~~~p~~rDTv~vp~~g~v~irf~-adnpG~w~~HCHil~H~d~GM~ 409 (434)
||+++.+.+.... .....+..++.|||||.|+++++++|||+ +||||.|||||||++|||.|||
T Consensus 505 Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM 584 (612)
T 3gyr_A 505 VLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMM 584 (612)
T ss_dssp EEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCE
T ss_pred EEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCC
Confidence 9998643322100 11234567889999999999999999999 6999999999999999999999
Q ss_pred eEEEEecCCC
Q 013875 410 TAFAVEDGPG 419 (434)
Q Consensus 410 ~~~~v~~~~~ 419 (434)
++|+|.+++.
T Consensus 585 ~~f~V~~p~~ 594 (612)
T 3gyr_A 585 RPFVVMPPEA 594 (612)
T ss_dssp EEEEEECHHH
T ss_pred cceEEeCCcc
Confidence 9999987653
No 16
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=2.4e-55 Score=459.61 Aligned_cols=340 Identities=16% Similarity=0.156 Sum_probs=221.4
Q ss_pred Cccc-CCCceEEeccCCC----cccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccC-----------
Q 013875 2 LKRS-KSKARKWVCHRTC----QMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSF----------- 65 (434)
Q Consensus 2 ~~~~-~~Gt~wYH~H~~~----q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------- 65 (434)
|++. ++||||||||... |+.+ ||+|+|||.+++...+. +.....+. .++++||..+..
T Consensus 159 f~~~~~aGT~wYH~H~~~~t~~q~~~---GL~G~liV~~~~~~~~~-lp~~d~d~--~l~l~Dw~~~~~~~~~~~~~l~~ 232 (612)
T 2g23_A 159 YPNDHQATQWWYHDHAMNITRWNVMA---GLYGTYLVRDDEEDALG-LPSGDREI--PLLIADRNLDTDEDGRLNGRLLH 232 (612)
T ss_dssp ECCCSCSCEEEEEECCTTTHHHHTTT---TCEEEEEEECHHHHTTT-CCCGGGEE--EEEEEEECEEECTTSCEEEEEEE
T ss_pred EEecCCCceEEEecccCCcchhhhhc---cceeEEEEcCccccccc-CCCCcceE--EEEEEEEeccCCccccccccccc
Confidence 5665 7999999999854 7777 99999998775433211 00000111 123344333211
Q ss_pred -----------CC-----CCCCCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCC-------eeEEEE
Q 013875 66 -----------GF-----LALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGH-------NFTVVE 122 (434)
Q Consensus 66 -----------~~-----~~~~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~-------~~~via 122 (434)
++ +..+|.+||||+. .+.++|++| +|||||||+|+.+.++|+|++| +|+|||
T Consensus 233 ~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~----~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa 307 (612)
T 2g23_A 233 KTVIVQQSNPETGKPVSIPFFGPYTTVNGRI----WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG 307 (612)
T ss_dssp EEEEEESSCSSSSCCEECCCCCSEEEETTEE----SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE
T ss_pred ccccccccccccCcccccCCcCCEEEECCcc----CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE
Confidence 01 1468999999994 589999999 9999999999999999999999 899999
Q ss_pred eCCccc-CCeeee------EEEeCCCCeEEEEEEeCCCCC-ceEEEEeccCCCCCCCC---CcceEEEEEEcCCCCC--C
Q 013875 123 VDAVYT-KPFTTE------AILIAPGQTTNVLVQANQKPG-RYFMAARPFNDAPIPVD---NKTATGILQYKGIPNS--L 189 (434)
Q Consensus 123 ~DG~~~-~p~~~~------~~~l~~geR~dv~v~~~~~~g-~~~l~a~~~~~~~~~~~---~~~~~ail~y~~~~~~--~ 189 (434)
+||+++ +|+.++ +|.|+|||||||+|++++.+| +|+|+........+... ......++++...... .
T Consensus 308 ~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~ 387 (612)
T 2g23_A 308 SDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEED 387 (612)
T ss_dssp ETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCC
T ss_pred eCCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCC
Confidence 999999 699999 999999999999999998666 68888753211110000 0111246666533221 1
Q ss_pred CCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccceEEEE-----------------Ee-ccCCC-CCC------
Q 013875 190 LPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFY-----------------TI-GFGKD-SCP------ 244 (434)
Q Consensus 190 ~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~l-----------------~~-~~~~~-~~~------ 244 (434)
...+|.. |+.. ....+...+. ..|.+.+ .. ..... ..+
T Consensus 388 ~~~~P~~---------------L~~~-~~~l~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (612)
T 2g23_A 388 SFALPEV---------------LSGS-FRRMSHDIPH-GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQ 450 (612)
T ss_dssp CCCCCSS---------------CCSS-CCCCCTTSCC-EEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEE
T ss_pred CCCCChh---------------hccc-cccCCccccc-ceeEEeeccccccccccccceeecccccccccccccccccee
Confidence 1112210 1000 0000000000 0011111 10 00000 000
Q ss_pred --ccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCcccceeeeEeecCCeEEE
Q 013875 245 --TCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIEL 322 (434)
Q Consensus 245 --~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~ 322 (434)
...| ....|+|||+.|.. ...+.++.|++|+|
T Consensus 451 ~~~~~g-~~~~~~iNG~~~~~---------------------------------------------~~~~~v~~G~~v~w 484 (612)
T 2g23_A 451 VTGADG-RTKTYRRTAATFND---------------------------------------------GLGFTIGEGTHEQW 484 (612)
T ss_dssp EECTTS-CEEEEEEEECSTTS---------------------------------------------CCCEEEETTCEEEE
T ss_pred eeccCC-ceeEEEECCccCCC---------------------------------------------CCceEecCCCEEEE
Confidence 0001 12346677766531 12378999999999
Q ss_pred EEEeCCCCCCCCCCccccCCceEEEEecCCcC---CCCC------------CCCCCCCCCCCccceeEecCCcEEEEEEE
Q 013875 323 VLQDTNLLTVESHPFHLHGYNFFVVGTGIGNF---DPVK------------YPANYNLVDPIERNTAAVPTGGWTAIRFR 387 (434)
Q Consensus 323 vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~---~~~~------------~~~~~n~~~p~~rDTv~vp~~g~v~irf~ 387 (434)
+|.|.+ .+.|||||||+.|+|++++.+.+ ++.. ....++..++.|||||.|+|+++++|+|+
T Consensus 485 ~l~N~~---~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~ 561 (612)
T 2g23_A 485 TFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGK 561 (612)
T ss_dssp EEEECS---SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEE
T ss_pred EEEeCC---CCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEE
Confidence 999975 67999999999999999853221 1100 00234556778999999999999999999
Q ss_pred cC-CceeeEEeecchhhHHccceeEEEEecCC
Q 013875 388 AD-NPGVWFMHCHLELHTGWGLKTAFAVEDGP 418 (434)
Q Consensus 388 ad-npG~w~~HCHil~H~d~GM~~~~~v~~~~ 418 (434)
|| |||.|||||||++|+|.|||+.|.|.+.+
T Consensus 562 ~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 562 FDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp CCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred eCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 98 99999999999999999999999998653
No 17
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=8.3e-56 Score=452.20 Aligned_cols=327 Identities=19% Similarity=0.221 Sum_probs=216.5
Q ss_pred CcccC-CCceEEeccC----CCcccCCCCCCCcceEEecCChhHHH--HhhhccCcchHHHHHHhhhhccCCC-------
Q 013875 2 LKRSK-SKARKWVCHR----TCQMHTQSTGSQGPSFHVLRNVRKLS--KLLEKTSSLGIDIIYSNLLKNSFGF------- 67 (434)
Q Consensus 2 ~~~~~-~Gt~wYH~H~----~~q~~~~~~Gl~G~liv~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~------- 67 (434)
|++.| +||||||||. +.|+.. ||+|+|||.+++...+. ..++. .+. .++++|+..+..+.
T Consensus 101 f~~~~~aGT~wYH~H~~~~t~~q~~~---GL~G~liV~~~~~~~~~lp~~y~~-~d~--~lvl~D~~~~~~g~~~~~~~~ 174 (488)
T 3od3_A 101 LNVDQPAATCWFHPHQHGKTGRQVAM---GLAGLVVIEDDEILKLMLPKQWGI-DDV--PVIVQDKKFSADGQIDYQLDV 174 (488)
T ss_dssp EECCSCSEEEEEECCCTTTHHHHHHT---TCCEEEEEECHHHHTTCCCCCBTT-TEE--EEEEEEECBCTTSSBCCCCSH
T ss_pred EecCCCceeEEEEecCCCcchhhhhc---cceeEEEEcCccccccCCcccCCc-cce--eEEEEEeeecCCCceeccccc
Confidence 56666 7999999997 567778 99999998765443211 11110 111 13455554432211
Q ss_pred -----CCCCCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEE-cCCeeEEEEeCCccc-CCeeeeEEEeCC
Q 013875 68 -----LALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAI-AGHNFTVVEVDAVYT-KPFTTEAILIAP 140 (434)
Q Consensus 68 -----~~~~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i-~g~~~~via~DG~~~-~p~~~~~~~l~~ 140 (434)
...+|.+||||+. .+.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||+++ +|+.+++|.|+|
T Consensus 175 ~~~~~g~~gd~~lvNG~~----~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~p 249 (488)
T 3od3_A 175 MTAAVGWFGDTLLTNGAI----YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLM 249 (488)
T ss_dssp HHHHHCCCCSEEEETTBS----SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECT
T ss_pred cccccCCCCCEEEEcCCc----CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECC
Confidence 2467999999995 466666 5789999999999999999999 699999999999987 899999999999
Q ss_pred CCeEEEEEEeCCCCCceEEEEeccCCCCCCC-CCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCC
Q 013875 141 GQTTNVLVQANQKPGRYFMAARPFNDAPIPV-DNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPK 219 (434)
Q Consensus 141 geR~dv~v~~~~~~g~~~l~a~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~ 219 (434)
||||||+|++++. +.|+|++.......... .......+++...........+|. .|..+. .
T Consensus 250 GeR~dvlv~~~~~-~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~---------------~L~~~~--~ 311 (488)
T 3od3_A 250 GERFEVLVEVNDN-KPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPD---------------TLSSLP--A 311 (488)
T ss_dssp TCEEEEEEEECTT-CCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCS---------------CCCCCC--C
T ss_pred CCEEEEEEEeCCC-ceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCc---------------ccccCC--C
Confidence 9999999999974 78999886544321110 111233344443211111111111 111110 0
Q ss_pred CCCCCCcccceEEEEEeccC--------------CCCCCcc----------CCC-------ceE----EEeecCccccCC
Q 013875 220 FPADVPQKVDRKLFYTIGFG--------------KDSCPTC----------VNG-------TRL----LATLNNISFVMP 264 (434)
Q Consensus 220 ~p~~~p~~~~~~~~l~~~~~--------------~~~~~~~----------~g~-------~~~----~~~iN~~sf~~p 264 (434)
.| ......+|++.+.+... ......+ .|. ..+ .|+|||++|...
T Consensus 312 ~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~~ 390 (488)
T 3od3_A 312 LP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMN 390 (488)
T ss_dssp CC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCTT
T ss_pred Cc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCeeCCCC
Confidence 01 01122356666543200 0000000 000 001 368898877421
Q ss_pred ChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCce
Q 013875 265 QTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNF 344 (434)
Q Consensus 265 ~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F 344 (434)
+ ..+.++.|++|+|.|.|.+ +.+.|||||||++|
T Consensus 391 ~--------------------------------------------~~~~~~~G~~e~w~l~N~~--~~~~Hp~HlHg~~F 424 (488)
T 3od3_A 391 K--------------------------------------------PMFAAAKGQYERWVISGVG--DMMLHPFHIHGTQF 424 (488)
T ss_dssp C--------------------------------------------CSEECCBSSCEEEEEECTT--CCCCEEEEETTCCB
T ss_pred C--------------------------------------------CceEcCCCCEEEEEEEeCC--CCCCccEEEcCceE
Confidence 1 1268899999999999975 25789999999999
Q ss_pred EEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcC----CceeeEEeecchhhHHccceeEEEE
Q 013875 345 FVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD----NPGVWFMHCHLELHTGWGLKTAFAV 414 (434)
Q Consensus 345 ~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~ad----npG~w~~HCHil~H~d~GM~~~~~v 414 (434)
+|++++..... ..++.|||||.|+ |++++|+|++| +||.||||||+++|+|.|||++|.|
T Consensus 425 ~Vl~~~g~~~~---------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 425 RILSENGKPPA---------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp EEEEBTTBCCC---------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred EEeccCCCccc---------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 99999632211 2346799999999 99999999984 5789999999999999999999976
No 18
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=2.8e-38 Score=322.96 Aligned_cols=317 Identities=17% Similarity=0.154 Sum_probs=197.0
Q ss_pred CcccCCCceEEeccCCCcccCCCCCCCcceEEecCChhHH----HH-hhhccCcch--HHHHHH---hhhhc-----c-C
Q 013875 2 LKRSKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRKL----SK-LLEKTSSLG--IDIIYS---NLLKN-----S-F 65 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~~l----~~-~~~~~~~~~--~~~~~~---~~~~~-----~-~ 65 (434)
|++.++||||||||...|+.. ||.|.|||.++..... .. .+.. .... ++.... ..... . .
T Consensus 102 f~~~~~Gt~~y~~~~~~h~~~---Gm~G~i~V~~~~~~~~~~~~~~~~~~~-~~~p~~~d~~~~~~~~~~l~~~~~~~~~ 177 (447)
T 2dv6_A 102 FVASKVGEFNYYCSIAGHRQA---GMEGNIQVLPGNRAEMKSSGADITRDP-ADLPGPIGPRQAKTVRIDLETVEVKGQL 177 (447)
T ss_dssp EECCSCEEEEEECCSTTHHHH---TCEEEEEEESSCCCCCCCSSBCCBCCT-TCSCCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred EEcCCCEEEEEEeCCCChhhC---CCEEEEEEeCCccccCCCcchhhccCh-hhcCCccccCCCcEEEEEEEEEEEEEec
Confidence 677889999999999888877 9999999877543211 00 0000 0000 000000 00000 0 0
Q ss_pred CCCCCCCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCC-CCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeE
Q 013875 66 GFLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAAL-NDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 144 (434)
Q Consensus 66 ~~~~~~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~-~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~ 144 (434)
......+.+++||+. ..+.+++++|++||||++|.+. ...+.++++|. ++.||.+ +.+.|.||||+
T Consensus 178 ~~g~~~~~~~~NG~~---pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~------~~~~i~pG~~~ 244 (447)
T 2dv6_A 178 DDNTTYTYWTFNGKV---PGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA------AFTQTDPGEET 244 (447)
T ss_dssp ETTEEEEEEEETTBB---SCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG------GGCCBCTTCEE
T ss_pred cCCceeEEEEECCcc---CCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC------ccEEeCCCCEE
Confidence 001224678999984 2478999999999999999985 35667777774 3689984 22359999999
Q ss_pred EEEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCC
Q 013875 145 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADV 224 (434)
Q Consensus 145 dv~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 224 (434)
+++++++++ |+||++........ .......+.|.+.+... + |.. +..... .+....... ..
T Consensus 245 ~~~~~~~~~-G~~~yh~h~~~~~~--~~~~Gl~g~l~v~~~~~-----~---P~~-d~~~~~----~~~~~~~~~---~~ 305 (447)
T 2dv6_A 245 VVTFKALIP-GIYVYHCATPSVPT--HITNGMYGLLLVEPEGG-----L---PQV-DREFYV----MQGEIYTVK---SF 305 (447)
T ss_dssp EEEEECCSC-EEEEEECCSSSHHH--HHHTTCEEEEEEECTTC-----S---CCC-SEEEEE----EEEEECBSS---CT
T ss_pred EEEEECCCC-eEEEEEeCCCChHH--HHhCCCEEEEEEeCCCC-----C---CCC-CeeEEE----EecccccCC---cc
Confidence 999999875 99999986310000 00122456777754321 1 111 110000 000000000 00
Q ss_pred CcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCC
Q 013875 225 PQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLG 304 (434)
Q Consensus 225 p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~ 304 (434)
....... ..... ..+.....|+|||+.|...
T Consensus 306 --~~~g~~~--~~~~~-----~~~~~~~~~~iNG~~~~~~---------------------------------------- 336 (447)
T 2dv6_A 306 --GTSGEQE--MDYEK-----LINEKPEYFLFNGSVGSLT---------------------------------------- 336 (447)
T ss_dssp --TCCEECC--BBHHH-----HHTTCCSEEEETTSTTCCC----------------------------------------
T ss_pred --ccccccc--CChHH-----hhccCCCEEEECCcccCCC----------------------------------------
Confidence 0000000 00000 0000122467888755210
Q ss_pred cccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCC-ccceeEecCCcEEE
Q 013875 305 TSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPI-ERNTAAVPTGGWTA 383 (434)
Q Consensus 305 ~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~-~rDTv~vp~~g~v~ 383 (434)
....+.++.|++++|+|.|.+ ....||||||||+|+||+.+ |.+ +..|. +|||+.|+++++++
T Consensus 337 ---~~~~~~v~~g~~vrlrliN~~--~~~~h~~hlhGh~f~vv~~d-G~~----------~~~p~~~~dtv~l~pg~r~~ 400 (447)
T 2dv6_A 337 ---RSHPLYASVGETVRIFFGVGG--PNFTSSFHVIGEIFDHVYSL-GSV----------VSPPLIGVQTVSVPPGGATI 400 (447)
T ss_dssp ---CCCCEEECTTCEEEEEEEEEE--SSCCEEEEEETCCEEEECGG-GCS----------SSCCEEEESEEEECTTEEEE
T ss_pred ---CCcceEECCCCEEEEEEEeCC--CCceEeEEEcCcEEEEEEcC-Ccc----------cCCCcccccEEEECCCcEEE
Confidence 013478999999999999965 25689999999999999985 321 12344 79999999999999
Q ss_pred EEEEcCCceeeEEeecchhhHHccceeEEEEecCCC
Q 013875 384 IRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 419 (434)
Q Consensus 384 irf~adnpG~w~~HCHil~H~d~GM~~~~~v~~~~~ 419 (434)
|+|++||||.|+||||+++|++.||+++|.|+....
T Consensus 401 i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 401 VDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp EEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred EEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 999999999999999999999999999999986643
No 19
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=8.8e-34 Score=303.87 Aligned_cols=86 Identities=14% Similarity=0.266 Sum_probs=77.2
Q ss_pred eEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCCc
Q 013875 312 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNP 391 (434)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnp 391 (434)
+.++.|++|+|.|.|.+. ..+.||||||||.|+|+ +.++||+.|.||+.+.|.|++|+|
T Consensus 628 l~v~~Ge~vr~rliN~g~-~~~~h~~HlhGh~f~v~--------------------~~~~Dtv~l~Pg~~~~v~~~ad~p 686 (742)
T 2r7e_A 628 LSVCLHEVAYWYILSIGA-QTDFLSVFFSGYTFKHK--------------------MVYEDTLTLFPFSGETVFMSMENP 686 (742)
T ss_dssp CCCCSSCCCEEEEEECSS-CCCCCCCEESSSCCCCB--------------------SSSBCSSCCCCCSSEECCEECCCC
T ss_pred EEEeCCCEEEEEEEeCCC-CcceEEEEEcCcEEEEe--------------------ccceeEEEECCCcEEEEEEEcCCC
Confidence 789999999999999652 23579999999999987 147999999999999999999999
Q ss_pred eeeEEeecchhhHHccceeEEEEecCC
Q 013875 392 GVWFMHCHLELHTGWGLKTAFAVEDGP 418 (434)
Q Consensus 392 G~w~~HCHil~H~d~GM~~~~~v~~~~ 418 (434)
|.|+||||+++|+++|||++|.|.+-.
T Consensus 687 G~w~~hcH~~~H~~~GM~~~~~V~~~~ 713 (742)
T 2r7e_A 687 GLWILGCHNSDFRNRGMTALLKVSSCD 713 (742)
T ss_dssp CCSCCEECCCSTTHHHHSCCCCCCCCC
T ss_pred eEEEEEeCCchHHhCCCeEEEEEEeCC
Confidence 999999999999999999999998543
No 20
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.97 E-value=1.4e-31 Score=297.82 Aligned_cols=93 Identities=19% Similarity=0.438 Sum_probs=82.8
Q ss_pred eeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEc
Q 013875 309 TRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA 388 (434)
Q Consensus 309 ~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~a 388 (434)
...+.++.|++|+|+|.|.+. ..+.||||||||.|+|++++ |.||||+.|+|+++++|+|++
T Consensus 969 ~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~~F~vv~~~-----------------p~~~DTv~v~pg~~~~v~~~a 1030 (1065)
T 2j5w_A 969 LQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGHSFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFP 1030 (1065)
T ss_dssp CCCCEEETTCEEEEEEEECCS-TTCCEEEEESSCCEEETTTT-----------------CEEESEEEECTTCEEEEEECC
T ss_pred CccEEeCCCCEEEEEEEeCCC-CCcceeEEEcccEEEEEecC-----------------CceeeEEEECCCCeEEEEEEC
Confidence 345889999999999999752 25689999999999999663 579999999999999999999
Q ss_pred CCceeeEEeecchhhHHccceeEEEEecCCC
Q 013875 389 DNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 419 (434)
Q Consensus 389 dnpG~w~~HCHil~H~d~GM~~~~~v~~~~~ 419 (434)
||||.|+||||+++|++.|||++|.|.+.+.
T Consensus 1031 d~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1031 RTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp CSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred CCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 9999999999999999999999999987643
No 21
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.97 E-value=7.7e-31 Score=291.88 Aligned_cols=164 Identities=12% Similarity=0.170 Sum_probs=110.6
Q ss_pred CCceEEeccCCCcccCCCCCCCcceEEecCChhHHH----------HhhhccCcchHHHHH----HhhhhccCCC----C
Q 013875 7 SKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRKLS----------KLLEKTSSLGIDIIY----SNLLKNSFGF----L 68 (434)
Q Consensus 7 ~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~~l~----------~~~~~~~~~~~~~~~----~~~~~~~~~~----~ 68 (434)
+||||||||...|.+. ..||+|+|||.+++...+. .++.+..+. .++.. .....++... .
T Consensus 174 aGT~wYHsH~~~~~qv-~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~-~~w~~~~~~~~~~~~p~~~~~~~~ 251 (1065)
T 2j5w_A 174 CVTRIYHSHIDAPKDI-ASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDEN-FSWYLEDNIKTYCSEPEKVDKDNE 251 (1065)
T ss_dssp EEEEEEECCSSHHHHH-HHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGG-GSTTHHHHHHHHCSCGGGCCTTCH
T ss_pred ceEEEEEeccCchhHh-hCccEEEEEEecCcccCCCccCCCccceEEEeeeecCC-ccccccchhhhhhcCccccccccc
Confidence 4999999999776531 2399999998876532111 011100000 00111 1110011000 0
Q ss_pred ---CCCCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCC-CeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeE
Q 013875 69 ---ALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALN-DELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 144 (434)
Q Consensus 69 ---~~~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~ 144 (434)
..++.++|||+.. ...+.++|++|++|||||||+|+. ..+.|+|+||+|+ ++|+.++++.|+||||+
T Consensus 252 ~~~~~~~~~~iNG~~~-~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~ 322 (1065)
T 2j5w_A 252 DFQQSNRMYSVNGYTF-GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLF 322 (1065)
T ss_dssp HHHHHTEEEEETTEET-TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBTCEE
T ss_pred cccccCcEEEECCccC-CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCCcEE
Confidence 0235799999964 235689999999999999999975 6899999999999 46789999999999999
Q ss_pred EEEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCC
Q 013875 145 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPN 187 (434)
Q Consensus 145 dv~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~ 187 (434)
||+|++++ +|.|+++....... .....+.+++.+...
T Consensus 323 dVlv~~~~-pG~y~i~~h~~~h~-----~~Gm~~~~~V~~~~~ 359 (1065)
T 2j5w_A 323 DAYMVAQN-PGEWMLSCQNLNHL-----KAGLQAFFQVQECNK 359 (1065)
T ss_dssp EEEEECCS-CEEEEEEECSHHHH-----HTTCEEEEEEECSCC
T ss_pred EEEEEeCC-CeeEEEEecCcchh-----hCCCEEEEEEecCCC
Confidence 99999998 59999998754211 123577888876443
No 22
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.96 E-value=2.2e-29 Score=247.57 Aligned_cols=220 Identities=17% Similarity=0.203 Sum_probs=154.5
Q ss_pred cCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCC---
Q 013875 77 NSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQK--- 153 (434)
Q Consensus 77 NG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~--- 153 (434)
||+. ..|.|++++|+++|+|++|.... .+.|+.+|..+. .+.||.++ +...|.|||+++..++++++
T Consensus 71 ng~~---pGP~I~v~~Gd~v~v~~~N~l~~-~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~ 140 (343)
T 3cg8_A 71 KASV---PGPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRR 140 (343)
T ss_dssp CCBS---SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEEC
T ss_pred CCCc---cCCEEEEECCCEEEEEEEECCCC-CeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcc
Confidence 6763 35899999999999999999964 445888888766 68999985 23468999999999998763
Q ss_pred ---------CCceEEEEeccCCC---CCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCC
Q 013875 154 ---------PGRYFMAARPFNDA---PIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFP 221 (434)
Q Consensus 154 ---------~g~~~l~a~~~~~~---~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p 221 (434)
.|.||......... ........+..|++..+.
T Consensus 141 ~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~------------------------------------ 184 (343)
T 3cg8_A 141 DDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD------------------------------------ 184 (343)
T ss_dssp TTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC------------------------------------
T ss_pred cccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCC------------------------------------
Confidence 24555544311100 000001112222222110
Q ss_pred CCCCcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCC
Q 013875 222 ADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTA 301 (434)
Q Consensus 222 ~~~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~ 301 (434)
. ..|+++.+.++ .|+|||+.|.
T Consensus 185 --~--~pd~e~~l~~~---------------d~~iNG~~~~--------------------------------------- 206 (343)
T 3cg8_A 185 --V--LPDATHTIVFN---------------DMTINNRKPH--------------------------------------- 206 (343)
T ss_dssp --C--CCSEEEEEEEE---------------TTEETTCCTT---------------------------------------
T ss_pred --C--CCCceEEEEcc---------------cceecccCCC---------------------------------------
Confidence 0 01345544331 2678987541
Q ss_pred CCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcE
Q 013875 302 SLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGW 381 (434)
Q Consensus 302 ~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~ 381 (434)
..+.+.++.|++|+|+|.|.+ .+.||||||||.|+|+.. |.+.. ....+.||||+.|+|+++
T Consensus 207 ------~~~~l~v~~Ge~vri~l~N~g---~~~HpfHlHGh~f~v~~~--G~~~~-------p~~~~~~~Dtv~v~PG~~ 268 (343)
T 3cg8_A 207 ------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNKITGPADS 268 (343)
T ss_dssp ------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEEEECTTCE
T ss_pred ------CCccEEeCCCCEEEEEEEcCC---ccccccEecCcEEEEecc--CcccC-------CCCcccceeeEEeCCCCE
Confidence 123488999999999999976 579999999999999743 32211 012357899999999999
Q ss_pred EEEEEEc---CCceeeEEeecchhhHHccceeEEEEecCC
Q 013875 382 TAIRFRA---DNPGVWFMHCHLELHTGWGLKTAFAVEDGP 418 (434)
Q Consensus 382 v~irf~a---dnpG~w~~HCHil~H~d~GM~~~~~v~~~~ 418 (434)
++|+|++ ||||.|+||||+++|++.|||++|.|.+.+
T Consensus 269 ~~v~~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 269 FGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 308 (343)
T ss_dssp EEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred EEEEEEECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCC
Confidence 9999995 899999999999999999999999998654
No 23
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=4.6e-29 Score=239.90 Aligned_cols=233 Identities=18% Similarity=0.197 Sum_probs=163.4
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeC
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQAN 151 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~ 151 (434)
..+++||+. ..|.++++.|+++++|+.|... ....|+++|.. ..+.||.+. ++...|.|||+++..++++
T Consensus 55 ~~~~~ng~~---pgP~i~~~~Gd~v~v~~~N~~~-~~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~ 124 (288)
T 3gdc_A 55 KGWSYNGRI---PGPTLWAREGDALRIHFTNAGA-HPHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDAT 124 (288)
T ss_dssp EEEEETTBS---SCCEEEEETTCEEEEEEEECSS-SCBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECC
T ss_pred EEEEECCcc---CCCcEEEeCCCEEEEEEEeCCC-CcccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcC
Confidence 589999985 3579999999999999999975 46679999975 457899874 2345689999999999996
Q ss_pred CCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccceE
Q 013875 152 QKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRK 231 (434)
Q Consensus 152 ~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~ 231 (434)
+ +|+||.......... .......+.|-....... + ..+++
T Consensus 125 ~-~Gt~~yH~H~~~~~~--~~~~Gl~G~liV~~~~~~--------~-----------------------------~~d~e 164 (288)
T 3gdc_A 125 P-FGTHLYHCHQSPLAP--HIAKGLYGGFIVEPKEGR--------P-----------------------------PADDE 164 (288)
T ss_dssp S-CEEEEEECCCSSHHH--HHHTTCEEEEEEECSSCC--------C-----------------------------CCSEE
T ss_pred C-CccEEEEecCcchHH--HHhCcCeEEEEEeCCccC--------C-----------------------------CCcce
Confidence 5 599999876421000 000112333333211000 0 01233
Q ss_pred EEEEec-cCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCccccee
Q 013875 232 LFYTIG-FGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATR 310 (434)
Q Consensus 232 ~~l~~~-~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 310 (434)
+.+.+. +... .+.....|+|||+.|.. ...
T Consensus 165 ~~l~~~d~~~~-----~g~~~~~~~iNG~~~~~--------------------------------------------~~~ 195 (288)
T 3gdc_A 165 MVMVMNGYNTD-----GGDDNEFYSVNGLPFHF--------------------------------------------MDF 195 (288)
T ss_dssp EEEEEEEECCS-----STTCCSEEEETTSTTHH--------------------------------------------HHS
T ss_pred EEEEEeeEecC-----CCCCcceEEECcccccc--------------------------------------------cCc
Confidence 333221 1110 11112357889876521 012
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+|.|.|.+. .++.|||||||+.|+|++.|.. +..|.++||+.|+||++++|+|++++
T Consensus 196 ~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~------------~~~~~~~Dtv~v~pg~~~~v~~~~~~ 262 (288)
T 3gdc_A 196 PVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM------------LTPSEYTDTISQVQGQRGILELRFPY 262 (288)
T ss_dssp CEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC------------SSCSEEESEEEEETTCEEEEEECCCS
T ss_pred ccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc------------cCCCceeeEEEeCCCceEEEEEECCC
Confidence 2788999999999999751 1346999999999999975421 23457999999999999999999999
Q ss_pred ceeeEEeecchhhHHccceeEEEEec
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVED 416 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~~ 416 (434)
||.|+||||+++|++.|||+.|.|.+
T Consensus 263 pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 263 PGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp CEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred CEEEEEEecChHHHhcCCCEEEEEeC
Confidence 99999999999999999999999863
No 24
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=4.3e-29 Score=245.52 Aligned_cols=241 Identities=17% Similarity=0.185 Sum_probs=159.2
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEe---CCcccCCeeeeEEEeCCCCeEEEEE
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEV---DAVYTKPFTTEAILIAPGQTTNVLV 148 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~---DG~~~~p~~~~~~~l~~geR~dv~v 148 (434)
+.+++||+. ..|.|++++|+++|+|++|.+.. .. +|+.|-+.+.+. ||.+. +++..|.||||+++.+
T Consensus 24 ~~~~~NG~~---pGP~I~v~~Gd~v~v~v~N~l~~-~~--siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f 93 (339)
T 2zwn_A 24 KVFGFNGQV---PGPLIHVQEGDDVIVNVTNNTSL-PH--TIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKF 93 (339)
T ss_dssp EEEEETTBS---SCCEEEEETTCEEEEEEEEESSS-CB--CCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEE
T ss_pred EEEEECCcc---CCCeEEEECCCEEEEEEEECCCC-Cc--cEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEE
Confidence 579999994 35899999999999999999853 33 445555666664 99873 3456799999999999
Q ss_pred EeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCccc
Q 013875 149 QANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKV 228 (434)
Q Consensus 149 ~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~ 228 (434)
++++ +|+||+.+...... ........+.+-....... .++ ...
T Consensus 94 ~~~~-~Gt~wyH~H~~~~~--q~~~~Gl~G~liV~p~~~~---~~~-------------------------------~~~ 136 (339)
T 2zwn_A 94 KADR-IGTLWYHCHVNVNE--HVGVRGMWGPLIVDPKQPL---PIE-------------------------------KRV 136 (339)
T ss_dssp ECCS-CEEEEEECCSSHHH--HTTTSCCEEEEEEECSSCC---TTG-------------------------------GGC
T ss_pred ECCC-CEEEEEEecCCchh--hhhcCCceEeEEecCCCcc---ccc-------------------------------ccC
Confidence 9986 59999987632100 0000111222222211100 000 000
Q ss_pred ceEEEEEec---cCCCCCCc---cCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCC
Q 013875 229 DRKLFYTIG---FGKDSCPT---CVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTAS 302 (434)
Q Consensus 229 ~~~~~l~~~---~~~~~~~~---~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~ 302 (434)
++++.+.++ ......+. ..+.....|+|||+.|.
T Consensus 137 d~e~~l~l~d~~~~~~~~~~~~g~~~~~~~~~~ING~~~~---------------------------------------- 176 (339)
T 2zwn_A 137 TKDVIMMMSTWESAVADKYGEGGTPMNVADYFSVNAKSFP---------------------------------------- 176 (339)
T ss_dssp SEEEEEEEEEECGGGTTCTTCCCSTTSCCCEEEETTBCTT----------------------------------------
T ss_pred CceEEEEeeheecccccccCCCCCCccccceEEEccccCC----------------------------------------
Confidence 111111110 00000000 00001124677776541
Q ss_pred CCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEE
Q 013875 303 LGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWT 382 (434)
Q Consensus 303 ~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v 382 (434)
....+.++.|++++|+|.|.+ ...||||||||.|+|++.+.+. ..+|.++||+.|+||+++
T Consensus 177 -----~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~~-----------~~~p~~~dtv~l~pg~r~ 237 (339)
T 2zwn_A 177 -----LTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGLP-----------LDSPYYADTVLVSPGERY 237 (339)
T ss_dssp -----SSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTEE-----------EEEEEEESEEEECTTCEE
T ss_pred -----CcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCee-----------cCCCcEEEEEEECCCCEE
Confidence 122378899999999999976 5699999999999999985222 224778999999999999
Q ss_pred EEEEEcCCceeeEEeecchhh------HHccceeEEEEecCC
Q 013875 383 AIRFRADNPGVWFMHCHLELH------TGWGLKTAFAVEDGP 418 (434)
Q Consensus 383 ~irf~adnpG~w~~HCHil~H------~d~GM~~~~~v~~~~ 418 (434)
.|+|++|+||.|++|||+++| ++.||++.|.+....
T Consensus 238 ~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 238 DVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 999999999999999999999 789999999987543
No 25
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=1.7e-28 Score=238.83 Aligned_cols=243 Identities=19% Similarity=0.207 Sum_probs=163.1
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeE-EEEeCCcccCCeeeeEEEeCCCCeEEEEEEe
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFT-VVEVDAVYTKPFTTEAILIAPGQTTNVLVQA 150 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~-via~DG~~~~p~~~~~~~l~~geR~dv~v~~ 150 (434)
..+++||+. ..|.|+++.|+++++|+.|... ....|+.+|.... ..+.||.+. +....|.|||+++..+++
T Consensus 23 ~~~~~ng~~---pGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~ 94 (318)
T 3g5w_A 23 HTFAFNGQV---PAPLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKA 94 (318)
T ss_dssp EEEEETTBS---SCCEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEEC
T ss_pred EEEEECCcc---CCceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEc
Confidence 578999985 3689999999999999999874 5677888887653 236899874 234578999999999999
Q ss_pred CCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccce
Q 013875 151 NQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDR 230 (434)
Q Consensus 151 ~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~ 230 (434)
+++ |+||......... ........+.|-....... ..+ ...++
T Consensus 95 ~~~-Gt~wYH~H~~~~~--~~~~~Gl~G~lIV~~~~~~---~~~-------------------------------~~~d~ 137 (318)
T 3g5w_A 95 EPA-GTMWYHCHVNVNE--HVTMRGMWGPLIVEPKNPL---PIE-------------------------------KTVTK 137 (318)
T ss_dssp CSC-EEEEEECCSSHHH--HHHHSCCEEEEEEECSSCC---HHH-------------------------------HTCCE
T ss_pred CCC-EEEEEEccCChhh--hhccCCCEEEEEEcCCCcc---ccc-------------------------------ccccc
Confidence 864 9999987631100 0000112233333221100 000 00011
Q ss_pred EEEEEec-cCCC----CCC-ccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCC
Q 013875 231 KLFYTIG-FGKD----SCP-TCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLG 304 (434)
Q Consensus 231 ~~~l~~~-~~~~----~~~-~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~ 304 (434)
++.+.++ .... ... ...+...-.|+|||+.|.
T Consensus 138 e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~~------------------------------------------ 175 (318)
T 3g5w_A 138 DYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSFP------------------------------------------ 175 (318)
T ss_dssp EEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCBT------------------------------------------
T ss_pred eeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCCC------------------------------------------
Confidence 1111110 0000 000 000001124778887541
Q ss_pred cccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEE
Q 013875 305 TSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAI 384 (434)
Q Consensus 305 ~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~i 384 (434)
.+..+.++.|++++|+|.|.+ ...||||||||.|+|++++.+. +..|.+|||+.|+||+++.|
T Consensus 176 ---~~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~dG~~-----------~~~p~~~dtv~l~pger~~v 238 (318)
T 3g5w_A 176 ---ETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGFP-----------LDKPIKGDTVLIGPGERYDV 238 (318)
T ss_dssp ---SSCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEETTEE-----------EEEEEEESEEEECTTCEEEE
T ss_pred ---CCccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecCCcc-----------cCCCccccEEEECCCCEEEE
Confidence 112378999999999999976 4589999999999999985322 23567999999999999999
Q ss_pred EEEcCCceeeEEeecchhhHH------ccceeEEEEecCC
Q 013875 385 RFRADNPGVWFMHCHLELHTG------WGLKTAFAVEDGP 418 (434)
Q Consensus 385 rf~adnpG~w~~HCHil~H~d------~GM~~~~~v~~~~ 418 (434)
+|++||||.|+||||+++|++ .|||..|.|...+
T Consensus 239 ~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 239 ILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999999998 6899999987644
No 26
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=2.1e-27 Score=226.98 Aligned_cols=225 Identities=16% Similarity=0.199 Sum_probs=158.7
Q ss_pred EEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCC-
Q 013875 75 IINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQK- 153 (434)
Q Consensus 75 lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~- 153 (434)
..||+- .-|.|+++.|+++++++.|.. .....|+.+|..+.- +.||.++ ..-.|.|||++...++++++
T Consensus 28 ~~ng~~---pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f~~~~~~ 97 (276)
T 3kw8_A 28 KGKASV---PGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTWRTHKPG 97 (276)
T ss_dssp TTCCBS---SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEEECCCCE
T ss_pred ccCCcc---cCCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEEEcCCcc
Confidence 468874 468999999999999999996 466778999976543 5899873 33458999999999999762
Q ss_pred -----------CCceEEEEeccCCCC-CCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCC
Q 013875 154 -----------PGRYFMAARPFNDAP-IPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFP 221 (434)
Q Consensus 154 -----------~g~~~l~a~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p 221 (434)
+|.||.......... .........+.|-......
T Consensus 98 ~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~---------------------------------- 143 (276)
T 3kw8_A 98 RRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD---------------------------------- 143 (276)
T ss_dssp ECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----------------------------------
T ss_pred ccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCC----------------------------------
Confidence 367777654311000 0000011222222211000
Q ss_pred CCCCcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCC
Q 013875 222 ADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTA 301 (434)
Q Consensus 222 ~~~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~ 301 (434)
. ..|+++.+.++ .|+|||+.|.
T Consensus 144 --~--~~drE~~l~l~---------------~~~iNG~~~~--------------------------------------- 165 (276)
T 3kw8_A 144 --V--LPDATHTIVFN---------------DMTINNRKPH--------------------------------------- 165 (276)
T ss_dssp --C--CCSEEEEEEEE---------------TTEETTCCTT---------------------------------------
T ss_pred --c--ccccceEEEec---------------ccccceeccc---------------------------------------
Confidence 0 01455555431 2689998652
Q ss_pred CCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcE
Q 013875 302 SLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGW 381 (434)
Q Consensus 302 ~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~ 381 (434)
..+.+.++.|++|+|+|.|.+ .+.|||||||+.|+|++. |.+... ...+.+|||+.|+|+++
T Consensus 166 ------~~p~i~v~~G~~vri~l~N~~---~~~Hp~HlHG~~f~v~~~--G~~~~p-------~~~~~~~Dtv~v~pg~~ 227 (276)
T 3kw8_A 166 ------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTGP-------DDPSRVIDNKITGPADS 227 (276)
T ss_dssp ------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCST-------TCCCCEESEEEECTTCE
T ss_pred ------CCCCEEEecCCEEEEEEecCC---CcceeEEEccceeEEecc--CccCCC-------cccccCCccEEeCCCce
Confidence 123488999999999999976 579999999999999764 332211 12346899999999999
Q ss_pred EEEEEEcC---CceeeEEeecchhhHHccceeEEEEecCCC
Q 013875 382 TAIRFRAD---NPGVWFMHCHLELHTGWGLKTAFAVEDGPG 419 (434)
Q Consensus 382 v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~v~~~~~ 419 (434)
+.++|+++ |||.|+||||+++|++.|||++|.|.+.++
T Consensus 228 ~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 228 FGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 99999997 899999999999999999999999988754
No 27
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.94 E-value=2.3e-26 Score=223.50 Aligned_cols=218 Identities=17% Similarity=0.189 Sum_probs=149.0
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCC-----------
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQK----------- 153 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~----------- 153 (434)
-|.|+++.|+++++++.|... ....|+.+|..+.- +.||.+.. .-.|.|||++...+++..+
T Consensus 41 GP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~-~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~ 113 (313)
T 3tas_A 41 GPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYEI-SSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRAG 113 (313)
T ss_dssp CCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCC-CCccEeecCCcCCc-cCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccCC
Confidence 588999999999999999874 56678888875432 57997652 1237899999988877532
Q ss_pred -CCceEEEEeccCCCCCCCC-CcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccceE
Q 013875 154 -PGRYFMAARPFNDAPIPVD-NKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRK 231 (434)
Q Consensus 154 -~g~~~l~a~~~~~~~~~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~ 231 (434)
.|.||.............+ .....+.|-.... -....|++
T Consensus 114 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~--------------------------------------~~~~~d~e 155 (313)
T 3tas_A 114 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK--------------------------------------GDVLPDRT 155 (313)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT--------------------------------------TCBCCSEE
T ss_pred CceEEEEeecCcccccchhhhhccccCceEeecc--------------------------------------cccccccc
Confidence 2556665432110000000 0011121111100 00112556
Q ss_pred EEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCcccceee
Q 013875 232 LFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRL 311 (434)
Q Consensus 232 ~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 311 (434)
+.+.++ .|++|+..+. ..+.
T Consensus 156 ~~l~~~---------------d~t~Ng~~~~---------------------------------------------~~~~ 175 (313)
T 3tas_A 156 HTIVFN---------------DMTINNRPAH---------------------------------------------TGPD 175 (313)
T ss_dssp EEEEEE---------------TTEETTCCTT---------------------------------------------CCCC
T ss_pred ceeecc---------------chhcccCCcc---------------------------------------------cccc
Confidence 555442 2677876431 1233
Q ss_pred eEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEc---
Q 013875 312 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA--- 388 (434)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~a--- 388 (434)
+.++.|++|+|+|.|.+ .+.||||||||.|+|+..+... .....|.++||+.|.|++.+.+++.+
T Consensus 176 l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~ 243 (313)
T 3tas_A 176 FEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKICGPADSFGFQVIAGEG 243 (313)
T ss_dssp EEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEECTTCEEEEEEETTTT
T ss_pred cccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEeCCCcceEEEEEeccC
Confidence 78899999999999976 6789999999999998775322 11235679999999999998887765
Q ss_pred CCceeeEEeecchhhHHccceeEEEEecCCC
Q 013875 389 DNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 419 (434)
Q Consensus 389 dnpG~w~~HCHil~H~d~GM~~~~~v~~~~~ 419 (434)
+|||.|+||||+++|+++|||++|.|++.+.
T Consensus 244 ~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 244 VGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred CCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 7999999999999999999999999997754
No 28
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.94 E-value=3.4e-26 Score=220.74 Aligned_cols=223 Identities=18% Similarity=0.256 Sum_probs=150.8
Q ss_pred cCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCC----
Q 013875 77 NSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ---- 152 (434)
Q Consensus 77 NG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~---- 152 (434)
||.. .-|.|+++.|+++++++.|... ....|+.+|..+. -+.||.++. .-.|.|||.+...+++..
T Consensus 52 ~gt~---PGP~i~~~~GD~v~v~~~N~l~-~~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~ 121 (299)
T 3t9w_A 52 GATV---PGPVLEMWEGDTLEIDLVNTTD-RVLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRR 121 (299)
T ss_dssp CCBS---SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEEC
T ss_pred CCCc---cCceEEEECCeEEEEEEEECCC-CCccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeeccccc
Confidence 5653 3589999999999999999874 4667888887644 367998652 123789999999888763
Q ss_pred --------CCCceEEEEeccCCCCCCCC-CcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCC
Q 013875 153 --------KPGRYFMAARPFNDAPIPVD-NKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPAD 223 (434)
Q Consensus 153 --------~~g~~~l~a~~~~~~~~~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~ 223 (434)
.+|.||.............+ .....+.|-....
T Consensus 122 ~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~-------------------------------------- 163 (299)
T 3t9w_A 122 ADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQ-------------------------------------- 163 (299)
T ss_dssp TTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT--------------------------------------
T ss_pred CCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecc--------------------------------------
Confidence 23667666542110000000 0011222211100
Q ss_pred CCcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCC
Q 013875 224 VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASL 303 (434)
Q Consensus 224 ~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 303 (434)
-+...|+++.+.++ .|.+|++.+.
T Consensus 164 ~~~~~d~e~~l~~~---------------~~~~Ng~~~~----------------------------------------- 187 (299)
T 3t9w_A 164 GDLLPKRQFTVVFN---------------DMMINNRAHH----------------------------------------- 187 (299)
T ss_dssp TCCCCSEEEEEEEE---------------TTEETTCCTT-----------------------------------------
T ss_pred cccCccccceeeee---------------eeeecCcccc-----------------------------------------
Confidence 00012555555442 2667876541
Q ss_pred CcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEE
Q 013875 304 GTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTA 383 (434)
Q Consensus 304 ~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~ 383 (434)
..+.+.++.|++|+|+|.|.+ ...||||||||.|+|+..+.... ....+.++||+.|.|++...
T Consensus 188 ----~~p~l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~~~---------~~~~~~~~Dtv~v~PGe~~~ 251 (299)
T 3t9w_A 188 ----DAPTFEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMRTS---------EYDPSPLIDIKDLNPGVSFG 251 (299)
T ss_dssp ----CCCEEEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSCCS---------TTCCCCEESEEECCTTCEEE
T ss_pred ----ccccceecCCCEEEEEEEecc---ccceeeeEecceEEEEecccccC---------CcCCCCceeeEEeCCceeEE
Confidence 123478999999999999976 57899999999999987763321 22345689999999997665
Q ss_pred EE---EEcCCceeeEEeecchhhHHccceeEEEEecCCC
Q 013875 384 IR---FRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 419 (434)
Q Consensus 384 ir---f~adnpG~w~~HCHil~H~d~GM~~~~~v~~~~~ 419 (434)
++ |++||||.|+|||||++|++.|||++|.|++.+.
T Consensus 252 ~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 252 FQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp EEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 44 4568999999999999999999999999987643
No 29
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.94 E-value=2.1e-27 Score=232.42 Aligned_cols=171 Identities=19% Similarity=0.221 Sum_probs=126.2
Q ss_pred CcccCCCceEEeccC---CCcccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccC----C--------
Q 013875 2 LKRSKSKARKWVCHR---TCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSF----G-------- 66 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~---~~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~-------- 66 (434)
|++.|+||||||||. ..|+.. ||+|+|||.+++. +.. .+. +.. .+++++..... +
T Consensus 123 f~~~~~Gt~wyH~h~~~~~~~~~~---Gl~G~~iV~~~~~--~p~-~d~--e~~--l~~~d~~~~~~~~~~g~~~~~~~~ 192 (327)
T 1kbv_A 123 FKALQPGLYIYHCAVAPVGMHIAN---GMYGLILVEPKEG--LPK-VDK--EFY--IVQGDFYTKGKKGAQGLQPFDMDK 192 (327)
T ss_dssp EECCSCEEEEEECCCSSHHHHHHT---TCEEEEEEECTTC--CCC-CSE--EEE--EEEEEECBSSCTTCCEEECBCHHH
T ss_pred EECCCCeEEEEEeCCCChhhhhhc---ceEEEEEEecCCC--CCC-Cce--EEE--EEeeeeeccCccccccccccChhH
Confidence 678899999999997 456667 9999999876531 111 100 000 01111111100 0
Q ss_pred -CCCCCCeEEEcCCCCC-CCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeE
Q 013875 67 -FLALNPTYIINSAPFY-LDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 144 (434)
Q Consensus 67 -~~~~~d~~lvNG~~~~-~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~ 144 (434)
....++.++|||+... ...+.++|++|++|||||+|+|+.+.+.|+|+||+|+||+.||++++|+.++++.|+||||+
T Consensus 193 ~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~ 272 (327)
T 1kbv_A 193 AVAEQPEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSA 272 (327)
T ss_dssp HHHTCCSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEE
T ss_pred hccCCCceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEE
Confidence 0134689999999641 01257999999999999999999899999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCC
Q 013875 145 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPN 187 (434)
Q Consensus 145 dv~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~ 187 (434)
||+|++++ +|.|+++......+ ......|+|+|.+...
T Consensus 273 dv~v~~~~-pG~y~l~~h~~~~~----~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 273 IVEFKVDI-PGNYTLVDHSIFRA----FNKGALGQLKVEGAEN 310 (327)
T ss_dssp EEEEEECS-CEEEEEEESSTHHH----HHSSCEEEEEEESCCC
T ss_pred EEEEEeCC-CeEEEEEecccccc----ccCCcEEEEEECCCCC
Confidence 99999998 49999998754321 0123689999987543
No 30
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.93 E-value=7.2e-26 Score=220.35 Aligned_cols=178 Identities=20% Similarity=0.294 Sum_probs=128.2
Q ss_pred CcccCCCceEEeccCCCcccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhc------cCCC-CCCCCeE
Q 013875 2 LKRSKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKN------SFGF-LALNPTY 74 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~d~~ 74 (434)
|++.++||||||||...+++....||+|+|||.+++...+....+. +.. ++++++..+ ..+. ...+|.+
T Consensus 92 f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~~~d~--e~~--l~l~dw~~~~~~~~~~~~~~~~~~d~~ 167 (318)
T 3g5w_A 92 FKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTK--DYI--LMLSDWVSSWANKPGEGGIPGDVFDYY 167 (318)
T ss_dssp EECCSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHHTCCE--EEE--EEEEEECGGGTTCTTCCCCTTCCCCEE
T ss_pred EEcCCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccccccc--eeE--EEEEeeccccccccccCCCCCCcCcEE
Confidence 6788999999999998776532359999999877654433221211 111 123333221 1111 2357899
Q ss_pred EEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCccc-CCeeeeEEEeCCCCeEEEEEEeCCC
Q 013875 75 IINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-KPFTTEAILIAPGQTTNVLVQANQK 153 (434)
Q Consensus 75 lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~-~p~~~~~~~l~~geR~dv~v~~~~~ 153 (434)
+|||+.. +....++|++|++|||||+|++.. .+.|+|+||.|+||+.||.++ +|...+++.|+||||+||+++++++
T Consensus 168 ~ING~~~-~~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~~p 245 (318)
T 3g5w_A 168 TINAKSF-PETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNP 245 (318)
T ss_dssp EETTBCB-TSSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCSC
T ss_pred EEcCcCC-CCCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECCCC
Confidence 9999975 234459999999999999999975 678999999999999999998 7999999999999999999999974
Q ss_pred CCceEEEEeccCCCC-CCCCCcceEEEEEEcCCC
Q 013875 154 PGRYFMAARPFNDAP-IPVDNKTATGILQYKGIP 186 (434)
Q Consensus 154 ~g~~~l~a~~~~~~~-~~~~~~~~~ail~y~~~~ 186 (434)
|.|.+.-....-.. +........++|+|.+..
T Consensus 246 -G~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 246 -GLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp -SEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred -eeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 99988866432111 000112357899998754
No 31
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.92 E-value=3.5e-25 Score=217.63 Aligned_cols=176 Identities=18% Similarity=0.312 Sum_probs=124.8
Q ss_pred CcccCCCceEEeccCCC--cccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhcc------CCCC-CCCC
Q 013875 2 LKRSKSKARKWVCHRTC--QMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNS------FGFL-ALNP 72 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~~~--q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~d 72 (434)
|++.|+||||||||... |+. ..||+|+|||.+++...+....+ .+.. ++++++..+. .+.+ ..++
T Consensus 93 f~~~~~Gt~wyH~H~~~~~q~~--~~Gl~G~liV~p~~~~~~~~~~d--~e~~--l~l~d~~~~~~~~~~~~g~~~~~~~ 166 (339)
T 2zwn_A 93 FKADRIGTLWYHCHVNVNEHVG--VRGMWGPLIVDPKQPLPIEKRVT--KDVI--MMMSTWESAVADKYGEGGTPMNVAD 166 (339)
T ss_dssp EECCSCEEEEEECCSSHHHHTT--TSCCEEEEEEECSSCCTTGGGCS--EEEE--EEEEEECGGGTTCTTCCCSTTSCCC
T ss_pred EECCCCEEEEEEecCCchhhhh--cCCceEeEEecCCCcccccccCC--ceEE--EEeeheecccccccCCCCCCccccc
Confidence 67889999999999865 554 14999999987654332111111 1111 1223322111 1111 2478
Q ss_pred eEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccC-CeeeeEEEeCCCCeEEEEEEeC
Q 013875 73 TYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK-PFTTEAILIAPGQTTNVLVQAN 151 (434)
Q Consensus 73 ~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~-p~~~~~~~l~~geR~dv~v~~~ 151 (434)
.++|||+.. +....++|++|++|||||+|++.. .+.|+|+||+|+||+.||.+++ |..++++.|+||||+||+|+++
T Consensus 167 ~~~ING~~~-~~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~ 244 (339)
T 2zwn_A 167 YFSVNAKSF-PLTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEAD 244 (339)
T ss_dssp EEEETTBCT-TSSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC
T ss_pred eEEEccccC-CCcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeC
Confidence 999999975 234569999999999999999954 8899999999999999999994 8899999999999999999998
Q ss_pred CCCCceEEEEeccCCCC-CCCCCcceEEEEEEcCCC
Q 013875 152 QKPGRYFMAARPFNDAP-IPVDNKTATGILQYKGIP 186 (434)
Q Consensus 152 ~~~g~~~l~a~~~~~~~-~~~~~~~~~ail~y~~~~ 186 (434)
++ |.|.+......-+. +........++|+|.+..
T Consensus 245 ~p-G~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 245 NP-GRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp SC-SEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred CC-eeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 85 99888876443211 101123357999998754
No 32
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=1.3e-25 Score=217.66 Aligned_cols=237 Identities=11% Similarity=0.015 Sum_probs=136.9
Q ss_pred EEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccC----CeeeeEEEeCCCCeEEEEEE
Q 013875 74 YIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK----PFTTEAILIAPGQTTNVLVQ 149 (434)
Q Consensus 74 ~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~----p~~~~~~~l~~geR~dv~v~ 149 (434)
.++||.. .|.|++++|+++|+|++|.. .....|+.+|..+. .+.||.+.. ++..+...|.||||++..++
T Consensus 52 ~~~n~~p----GP~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~ 125 (306)
T 1sdd_A 52 SRTSGLL----GPTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWI 125 (306)
T ss_dssp CSSCCSC----CCCEEEETTCEEEEEEEECS-SSCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEE
T ss_pred cccCCcc----CCEEEEeCCCEEEEEEEECC-CCcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEE
Confidence 4689875 48999999999999999976 46677888887642 268998762 22334577999999999999
Q ss_pred eCCCC---------CceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCC
Q 013875 150 ANQKP---------GRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKF 220 (434)
Q Consensus 150 ~~~~~---------g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~ 220 (434)
+++.+ |+||.......... ......+ ++|..........+ . +...+. ++
T Consensus 126 ~~~~~gp~~~d~~~GT~wYHsH~~~~~q-~~~GL~G-~liV~~~~~~~~~~-~---~~~~d~----------------e~ 183 (306)
T 1sdd_A 126 ISEHSGPTHDDPPCLTHIYYSYVNLVED-FNSGLIG-PLLICKKGTLTEDG-T---QKMFEK----------------QH 183 (306)
T ss_dssp CCGGGSCCSSSCSEEEEEEECCSSSHHH-HHTTCCE-EEEEECTTCBCTTS-S---BSSSCC----------------CC
T ss_pred eCCccCCCCCCCCceEEEEeccCCchhh-hccCceE-EEEEccCCCCCccC-C---cCcccc----------------eE
Confidence 98753 69999986321000 0011222 34444321110000 0 000000 00
Q ss_pred CCCCCcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCC
Q 013875 221 PADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLT 300 (434)
Q Consensus 221 p~~~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~ 300 (434)
..-+. + +...... .+.....++|||+.|..
T Consensus 184 ~l~~~---d----~d~~~~~------~~~~~~~~~ING~~~~~------------------------------------- 213 (306)
T 1sdd_A 184 VLMFA---V----FDESKSW------NQTSSLMYTVNGYVNGT------------------------------------- 213 (306)
T ss_dssp CCBCC---E----EETTSSS------SCCCCEEECSSSCCSSC-------------------------------------
T ss_pred EEEEE---e----ccccccc------ccCCCcceeeCCEecCC-------------------------------------
Confidence 00000 0 0000000 00012246788875410
Q ss_pred CCCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCc
Q 013875 301 ASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGG 380 (434)
Q Consensus 301 ~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g 380 (434)
.+.+.++.|++++|+|.|.+. ....||||||||.|++ .| .++||+.|.||+
T Consensus 214 --------~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~----dG----------------~~~dtv~l~pge 264 (306)
T 1sdd_A 214 --------MPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ----NH----------------HKISAITLVSAT 264 (306)
T ss_dssp --------CCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE----TT----------------EECSCCCEETTC
T ss_pred --------CcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee----CC----------------EEcceEEECCCc
Confidence 122667889999999999762 1257999999999986 11 369999999999
Q ss_pred EEEEEEEcCCceeeEEeecchhhHHccceeEEEEecC
Q 013875 381 WTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDG 417 (434)
Q Consensus 381 ~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~~~ 417 (434)
.+.|+|++++||.|+||||+++|++.|||++|.|.+.
T Consensus 265 r~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 265 STTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp CBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred EEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 9999999999999999999999999999999998753
No 33
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.89 E-value=7.8e-23 Score=217.61 Aligned_cols=247 Identities=15% Similarity=0.221 Sum_probs=144.3
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccC---C-eeeeEEEeCCCCeEEEEEEeCCC-----CC
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK---P-FTTEAILIAPGQTTNVLVQANQK-----PG 155 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~---p-~~~~~~~l~~geR~dv~v~~~~~-----~g 155 (434)
.|.|+++.|+++++|+.|... ....|+.||.... .+.||.+.. | ..+....|.|||+++..+++++. +|
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 489999999999999999975 5667888887654 578998752 2 23346679999999999999874 47
Q ss_pred ----ceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCC-CChhhhh-hhhhccccCCCCCCCCCCCcccc
Q 013875 156 ----RYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPAS-NDSEFAL-NYNKKLRSLNSPKFPADVPQKVD 229 (434)
Q Consensus 156 ----~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~-~~~~~~~-~~~~~l~~l~~~~~p~~~p~~~~ 229 (434)
+||.......... ......+.-|+.-.+..... +. .|.. .+..... .+..+.... +. ....
T Consensus 146 ~~c~T~wYHsH~~~~~q-~~~GL~G~lIV~~~~~~~~~-~~---~~~~~~e~~l~l~~~d~~~~w~----~~----~~~~ 212 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKD-IHSGLIGPLLICRKGTLDKE-TN---MPVDMREFVLLFMVFDEKKSWY----YD----KKPT 212 (647)
T ss_dssp CSEEEEEEECCSSHHHH-HTTTCEEEEEEECTTSSCTT-SC---CCSSCCEEEEEEEEEEGGGSSC----CC--------
T ss_pred CCceEEEEccCCCCccc-ccccCccCEEEeeCCCcccc-cC---CCCcceeEEEEEEeecCccccc----cc----cCcc
Confidence 9999876421000 00112222233322211100 00 0100 0100000 000000000 00 0000
Q ss_pred eEEE-EEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCcccc
Q 013875 230 RKLF-YTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRA 308 (434)
Q Consensus 230 ~~~~-l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 308 (434)
..+. +...+. .....++|||+.|.
T Consensus 213 ~~~~~~~~~~~---------~~~~~~~iNG~~~~---------------------------------------------- 237 (647)
T 1sdd_B 213 RSWRRASSEVK---------NSHEFHAINGMIYN---------------------------------------------- 237 (647)
T ss_dssp --------------------CCCEEEEETTBSSC----------------------------------------------
T ss_pred cccccCCcchh---------hcCceeccCCEecC----------------------------------------------
Confidence 0000 000000 01234567776541
Q ss_pred eeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEc
Q 013875 309 TRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA 388 (434)
Q Consensus 309 ~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~a 388 (434)
.+.+.++.|++++|+|.|.+. ..+.||||||||.|+|++.+ +.++||+.|.||++++|+|++
T Consensus 238 ~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~d-----------------~~~~d~v~l~pg~r~~v~~~~ 299 (647)
T 1sdd_B 238 LPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGTQ-----------------QHQLGVWPLLPGSFKTLEMKA 299 (647)
T ss_dssp CCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSSS-----------------CEEESSEEECTTEEEEEEEEC
T ss_pred CCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecCC-----------------CcccceEEECCCeEEEEEEEe
Confidence 123788999999999999752 13489999999999998552 358999999999999999999
Q ss_pred CCceeeEEeecchhhHHccceeEEEEecCCC
Q 013875 389 DNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 419 (434)
Q Consensus 389 dnpG~w~~HCHil~H~d~GM~~~~~v~~~~~ 419 (434)
++||.|+||||+++|++.|||++|.|.+.++
T Consensus 300 ~~pG~w~~hch~~~h~~~Gm~~~~~V~~~~c 330 (647)
T 1sdd_B 300 SKPGWWLLDTEVGEIQRAGMQTPFLIVDREC 330 (647)
T ss_dssp CSSEEEEEECCCHHHHTTTCEEEEEEECTTC
T ss_pred ccceEeecccCcccccccccccceeeecccc
Confidence 9999999999999999999999999976443
No 34
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.89 E-value=3.4e-24 Score=218.31 Aligned_cols=171 Identities=18% Similarity=0.196 Sum_probs=126.6
Q ss_pred CcccCCCceEEeccC---CCcccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccC-------------
Q 013875 2 LKRSKSKARKWVCHR---TCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSF------------- 65 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~---~~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------- 65 (434)
|++.++||||||||. ..|+.. ||+|+|||.+++.. .. ++. +.. ++++++..+..
T Consensus 113 f~~~~~Gt~~yH~H~~~~~~~~~~---Gl~G~~iv~~~~~~--~~-~d~--e~~--l~l~d~~~~~~~~~~~~~~~~~~~ 182 (442)
T 2zoo_A 113 FKALNPGLYIYHCATAPVGMHIAN---GMYGLILVEPKEGL--AP-VDR--EYY--LVQGDFYTKGEFGEAGLQPFDMAK 182 (442)
T ss_dssp EECCSCEEEEEECCCSSHHHHHHT---TCEEEEEEECTTCC--CC-CSE--EEE--EEEEEECBSSCTTCCEEECBCHHH
T ss_pred EEcCCCeEEEEecCCCChHHHHhC---ccEEEEEEeCCCCC--CC-CCc--eEE--EEeeeeeccCcccccccccCChhH
Confidence 678899999999985 456666 99999998765321 11 000 000 12222221110
Q ss_pred CCCCCCCeEEEcCCCCCC-CceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeE
Q 013875 66 GFLALNPTYIINSAPFYL-DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 144 (434)
Q Consensus 66 ~~~~~~d~~lvNG~~~~~-~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~ 144 (434)
.....++.++|||+.... ..+.+++++|++|||||+|+|+...+.|+|+||+|+||+.||.+++|..++++.|.||||+
T Consensus 183 ~~~~~~~~~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~ 262 (442)
T 2zoo_A 183 AIDEDADYVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAA 262 (442)
T ss_dssp HHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEE
T ss_pred hccCCCCEEEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeE
Confidence 001357899999996410 1257999999999999999998899999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCC
Q 013875 145 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPN 187 (434)
Q Consensus 145 dv~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~ 187 (434)
|++|++++ +|.|+++...+... ......++|+|.+...
T Consensus 263 ~v~v~~~~-~G~y~~~~~~~~~~----~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 263 IVEFKVEV-PGTFILVDHSIFRA----FNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEEEECCS-CEEEEEEESSTHHH----HTTSCEEEEEEESCCC
T ss_pred EEEEEcCC-CCeEEEEecccccc----cccCceEEEEecCCCC
Confidence 99999997 49999998754321 1234689999987654
No 35
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.88 E-value=3.4e-21 Score=189.51 Aligned_cols=243 Identities=17% Similarity=0.143 Sum_probs=150.8
Q ss_pred CCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCC-CCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEE
Q 013875 71 NPTYIINSAPFYLDTFAMEVESGKTYLLRIINAAL-NDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQ 149 (434)
Q Consensus 71 ~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~-~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~ 149 (434)
.+.+++||+. ..|.+++++|+++|+|++|... ...+.+++++... +.||.++. .|.|||++++.++
T Consensus 59 ~~~~~~ng~~---pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~~-------~i~PG~~~~y~~~ 125 (340)
T 2bw4_A 59 IHAMTFNGSV---PGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGALT-------QVNPGEETTLRFK 125 (340)
T ss_dssp EEEEEETTBS---SCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTTEEEEEEEE
T ss_pred EEEEEECCCC---CCCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccce-------EeCCCCEEEEEEE
Confidence 3689999984 3589999999999999999973 3556677777542 22343321 3899999999999
Q ss_pred eCCCCCceEEEEeccCCC-CCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCccc
Q 013875 150 ANQKPGRYFMAARPFNDA-PIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKV 228 (434)
Q Consensus 150 ~~~~~g~~~l~a~~~~~~-~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~ 228 (434)
+++ +|+||......... ........+ +++-........ ..+ .|. ..
T Consensus 126 ~~~-~Gt~wyH~h~~~~~~~~~~~Gl~G-~~iV~~~~~~~~--~~~-~p~----------------------------~~ 172 (340)
T 2bw4_A 126 ATK-PGVFVYHCAPEGMVPWHVTSGMNG-AIMVLPRDGLKD--EKG-QPL----------------------------TY 172 (340)
T ss_dssp CCS-CEEEEEECCCTTCHHHHHHTTCEE-EEEEECTBCEEC--TTS-CEE----------------------------CC
T ss_pred CCC-CeEEEEEcCCCCchhhHHhCcCEE-EEEEccCcCccc--ccC-CCc----------------------------Cc
Confidence 987 59999998642100 000011122 233332110000 000 000 01
Q ss_pred ceEEEEEec-cCC--CCCC-----------------ccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCC
Q 013875 229 DRKLFYTIG-FGK--DSCP-----------------TCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKP 288 (434)
Q Consensus 229 ~~~~~l~~~-~~~--~~~~-----------------~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~ 288 (434)
++.+.+.+. +.. .... .+.+.....++|||+.|...
T Consensus 173 d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~------------------------ 228 (340)
T 2bw4_A 173 DKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGALT------------------------ 228 (340)
T ss_dssp SEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTTTS------------------------
T ss_pred ceeEEEeeeeeeeccccCCcccccccccccccchhhHhhcCCCCEEEECCccCCcc------------------------
Confidence 111111100 000 0000 00000111355666543110
Q ss_pred CCCCCCCCCCCCCCCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCC
Q 013875 289 PKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDP 368 (434)
Q Consensus 289 p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p 368 (434)
..+.+.++.|++++|++.|.+ ...|++|+|||.|+|+.. |.+ .++
T Consensus 229 -------------------~~~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~d--G~~-----------~~~ 273 (340)
T 2bw4_A 229 -------------------GDHALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWAT--GKF-----------RNP 273 (340)
T ss_dssp -------------------GGGCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCT-----------TSC
T ss_pred -------------------CCCceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCC--Ccc-----------cCC
Confidence 024488999999998887754 567899999999999852 332 122
Q ss_pred C--ccceeEecCCcEEEEEEEcCCceeeEEeecch-hhHHccceeEEEEecCC
Q 013875 369 I--ERNTAAVPTGGWTAIRFRADNPGVWFMHCHLE-LHTGWGLKTAFAVEDGP 418 (434)
Q Consensus 369 ~--~rDTv~vp~~g~v~irf~adnpG~w~~HCHil-~H~d~GM~~~~~v~~~~ 418 (434)
+ ++||+.|.+|+.+.|.|++++||.|+||||++ +|++.|||++|.|....
T Consensus 274 p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 274 PDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp CEEEESCCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred ccccceEEEeCCCceEEEEEECCCCeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 3 47999999999999999999999999999999 59999999999998654
No 36
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.87 E-value=2.5e-22 Score=196.96 Aligned_cols=174 Identities=18% Similarity=0.139 Sum_probs=115.7
Q ss_pred CcccCCCceEEeccCC-----CcccCCCCCCCcceEEecCChh------------HHHHhhhccCc----chH-------
Q 013875 2 LKRSKSKARKWVCHRT-----CQMHTQSTGSQGPSFHVLRNVR------------KLSKLLEKTSS----LGI------- 53 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~~-----~q~~~~~~Gl~G~liv~~~~~~------------~l~~~~~~~~~----~~~------- 53 (434)
|++.|+||||||||.. .|+.. ||+|+|||.+++.. ++...+.++.. .+.
T Consensus 117 f~~~~~Gt~~yH~h~~~~~~~~~~~~---Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~~~~~~ 193 (333)
T 1mzy_A 117 FKATRAGAFVYHCAPGGPMIPWHVVS---GMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPKDEDGTYMRFSDP 193 (333)
T ss_dssp EECCSCEEEEEECCCSTTHHHHHHHT---TCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSCBCCCSSH
T ss_pred EECCCCEEEEEeecCCcccchhhhhC---CCEEEEEEccCcCccccccCCCccchheeeeeeeeccCccccccccccccc
Confidence 6788999999999986 58888 99999998764310 00001111100 000
Q ss_pred HHHHHhhhhccCCCCCCCCeEEEcCCCCC-CCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccC-Ce
Q 013875 54 DIIYSNLLKNSFGFLALNPTYIINSAPFY-LDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK-PF 131 (434)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~d~~lvNG~~~~-~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~-p~ 131 (434)
...+.+. .+.+ ....++.++|||+.+. ...+.++|++|++||||.+|++....+ ..+++|.|+|++ ||.+++ |.
T Consensus 194 ~~~~~~~-~~~~-~~~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~h~~~Vi~-dG~~~~~p~ 269 (333)
T 1mzy_A 194 SEGYEDM-VAVM-DTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRP-HLIGGHGDLVWE-TGKFHNAPE 269 (333)
T ss_dssp HHHHHHH-HHHH-TTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCE-EEETCCEEEEET-TCCTTSCCE
T ss_pred cccccch-hHHh-hccCCcEEEECCcccccCCCcceEecCCCEEEEEECCCCCcccc-EEECCCCeEEEe-CCcccCCCc
Confidence 0000000 0000 1246799999999641 014679999999888877766544444 348999999999 999996 44
Q ss_pred -eeeEEEeCCCCeEEEEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCC
Q 013875 132 -TTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPN 187 (434)
Q Consensus 132 -~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~ 187 (434)
.++++.|+||||+|++|+++++ |.|++....+... ......++++|.+..+
T Consensus 270 ~~~dtv~l~pGer~~v~v~a~~p-G~y~~~ch~~~h~----~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 270 RDLETWFIRGGTAGAALYKFLQP-GVYAYVNHNLIEA----VHKGATAHVLVEGEWD 321 (333)
T ss_dssp EEESBCCBCTTEEEEEEEECCSC-EEEEEEESSHHHH----HTTCCEEEEEEESCCC
T ss_pred cCcceEEECCCceEEEEEEcCCC-EEEEEecChhhhH----hhCCCEEEEEEcCCCC
Confidence 4799999999999999999985 9999988754211 0123578999987544
No 37
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.86 E-value=8.5e-21 Score=185.47 Aligned_cols=249 Identities=17% Similarity=0.155 Sum_probs=159.0
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCC-CeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEe
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALN-DELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQA 150 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~ 150 (434)
..+++||+. ..+.++|++|+++|+|++|.... ..+.++++|.. +.||.+.. ..|.|||++++.+++
T Consensus 59 ~~~~~ng~~---pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~~------~~i~PG~~~~y~f~~ 125 (327)
T 1kbv_A 59 RYWTFDGDV---PGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAAA------TFTAPGRTSTFSFKA 125 (327)
T ss_dssp EEEEETTBS---SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTTT------TCBCTTEEEEEEEEC
T ss_pred EEEEECCcc---CCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCcc------eeecCCCEEEEEEEC
Confidence 578999984 36899999999999999999753 57778888863 57887531 248999999999999
Q ss_pred CCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccce
Q 013875 151 NQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDR 230 (434)
Q Consensus 151 ~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~ 230 (434)
++ +|+||................ ..+++... .. . + |. .|..... -+....... .. ....
T Consensus 126 ~~-~Gt~wyH~h~~~~~~~~~~Gl-~G~~iV~~-~~--~---~---p~-~d~e~~l----~~~d~~~~~---~~--~~~g 184 (327)
T 1kbv_A 126 LQ-PGLYIYHCAVAPVGMHIANGM-YGLILVEP-KE--G---L---PK-VDKEFYI----VQGDFYTKG---KK--GAQG 184 (327)
T ss_dssp CS-CEEEEEECCCSSHHHHHHTTC-EEEEEEEC-TT--C---C---CC-CSEEEEE----EEEEECBSS---CT--TCCE
T ss_pred CC-CeEEEEEeCCCChhhhhhcce-EEEEEEec-CC--C---C---CC-CceEEEE----EeeeeeccC---cc--cccc
Confidence 88 499999865311000000111 22333332 11 0 1 11 1100000 000000000 00 0000
Q ss_pred EEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCccccee
Q 013875 231 KLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATR 310 (434)
Q Consensus 231 ~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 310 (434)
...+ .... ..+.....+.|||+.+.. + ...
T Consensus 185 ~~~~--~~~~-----~~~~~~~~~~iNG~~~~~------------------------------------------~-~~~ 214 (327)
T 1kbv_A 185 LQPF--DMDK-----AVAEQPEYVVFNGHVGAL------------------------------------------T-GDN 214 (327)
T ss_dssp EECB--CHHH-----HHHTCCSEEEETTSTTTT------------------------------------------S-GGG
T ss_pred cccc--ChhH-----hccCCCceEEEcCcccCC------------------------------------------C-Cce
Confidence 0000 0000 000011135677664310 0 013
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++++|+|.|.+ ....|+||||||.|+|++.+.+. ..|.++||+.|.||+++.|.|++++
T Consensus 215 ~l~v~~G~~vRlRliN~~--~~~~~~~~l~Gh~f~vi~~DG~~------------~~p~~~d~l~l~pGer~dv~v~~~~ 280 (327)
T 1kbv_A 215 ALKAKAGETVRMYVGNGG--PNLVSSFHVIGEIFDKVYVEGGK------------LINENVQSTIVPAGGSAIVEFKVDI 280 (327)
T ss_dssp CEEEETTEEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGSS------------CEECSBSEEEECTTEEEEEEEEECS
T ss_pred eEEeCCCCEEEEEEECCC--CCCceeEEEeCCEEEEEEcCCCc------------CCCCceeEEEECCCCEEEEEEEeCC
Confidence 478999999999999965 24689999999999999986332 2367899999999999999999999
Q ss_pred ceeeEEeecchhhH-HccceeEEEEecCC
Q 013875 391 PGVWFMHCHLELHT-GWGLKTAFAVEDGP 418 (434)
Q Consensus 391 pG~w~~HCHil~H~-d~GM~~~~~v~~~~ 418 (434)
||.|.+|||+.+|. ..||++.|.|....
T Consensus 281 pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 281 PGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp CEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred CeEEEEEeccccccccCCcEEEEEECCCC
Confidence 99999999999995 88999999998654
No 38
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.86 E-value=3.3e-22 Score=196.39 Aligned_cols=172 Identities=20% Similarity=0.186 Sum_probs=115.0
Q ss_pred CcccCCCceEEeccCC----CcccCCCCCCCcceEEecCChh--HH--HHhhhccCcchHHHHHHhhhhc--cC------
Q 013875 2 LKRSKSKARKWVCHRT----CQMHTQSTGSQGPSFHVLRNVR--KL--SKLLEKTSSLGIDIIYSNLLKN--SF------ 65 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~~----~q~~~~~~Gl~G~liv~~~~~~--~l--~~~~~~~~~~~~~~~~~~~~~~--~~------ 65 (434)
|++.|+||||||||.. .|+.. ||+|+|||.+++.. .+ ...++. +.. ++++++... ..
T Consensus 118 f~~~~~Gt~~yH~h~~~~~~~~~~~---Gl~G~liV~~~~~~~~~~~~~~~~D~--e~~--l~~~D~~~~~~~~g~~~~~ 190 (336)
T 1oe1_A 118 FKADRSGTFVYHCAPEGMVPWHVVS---GMSGTLMVLPRDGLKDPQGKPLHYDR--AYT--IGEFDLYIPKGPDGKYKDY 190 (336)
T ss_dssp EECCSCEEEEEECCCTTCHHHHHHT---TCEEEEEEECTTCCBCTTSCBCCCSE--EEE--EEEEEECCCBCTTSSBCCC
T ss_pred EECCCCeEEEEecCCCCchhHHHhC---CCeEEEEEecCcCCcccccCcccCCc--eeE--eeeeeeeeccccCCceeec
Confidence 6788999999999984 46677 99999998764310 00 000000 000 011111110 00
Q ss_pred -------------CCCCCCCeEEEcCCCCC-CCceeEEEeCCcEEEEEEEecCCCCeeEE-EEcCCeeEEEEeCCcccCC
Q 013875 66 -------------GFLALNPTYIINSAPFY-LDTFAMEVESGKTYLLRIINAALNDELFF-AIAGHNFTVVEVDAVYTKP 130 (434)
Q Consensus 66 -------------~~~~~~d~~lvNG~~~~-~~~~~~~v~~g~~~rlR~iN~~~~~~~~~-~i~g~~~~via~DG~~~~p 130 (434)
.....++.++|||+... +..+.++|++|+|||| +|++..+.+.+ .|+||.|+|++ ||.+++|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p 267 (336)
T 1oe1_A 191 ATLAESYGDTVQVMRTLTPSHIVFNGKVGALTGANALTAKVGETVLL--IHSQANRDTRPHLIGGHGDWVWE-TGKFANP 267 (336)
T ss_dssp SSTGGGHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEE--EEEESSSCBCEEETTCCEEEEET-TCCTTSC
T ss_pred ccccccccchhhHhhcCCCCEEEECCeeccCCCCcceEcCCCCEEEE--EecCCCCccceEEECCcCceEeC-CCcCcCC
Confidence 00246789999999641 1147899999997765 67766666554 46999999997 9999976
Q ss_pred e--eeeEEEeCCCCeEEEEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCC
Q 013875 131 F--TTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNS 188 (434)
Q Consensus 131 ~--~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~ 188 (434)
. .++++.|++|||+|++|++++ +|.|++........ ......|+++|.+....
T Consensus 268 ~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~----~~~G~~~~~~V~~~~~~ 322 (336)
T 1oe1_A 268 PQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEA----FELGAAGHIKVEGKWND 322 (336)
T ss_dssp CEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCCCT
T ss_pred ccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhcc----ccCCCeEEEEECCCCCh
Confidence 4 368999999999999999998 49999998753210 01336789999875543
No 39
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.85 E-value=6.5e-22 Score=194.63 Aligned_cols=172 Identities=20% Similarity=0.203 Sum_probs=113.6
Q ss_pred CcccCCCceEEeccCC----CcccCCCCCCCcceEEecCChhH--H--HHhhhccCcchHHHHHHhhhh--ccCC-----
Q 013875 2 LKRSKSKARKWVCHRT----CQMHTQSTGSQGPSFHVLRNVRK--L--SKLLEKTSSLGIDIIYSNLLK--NSFG----- 66 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~~----~q~~~~~~Gl~G~liv~~~~~~~--l--~~~~~~~~~~~~~~~~~~~~~--~~~~----- 66 (434)
|++.|+||||||||.. .|+.. ||+|+|||.+++... + ...++. +.. ++++++.. +..+
T Consensus 124 ~~~~~~Gt~wyH~h~~~~~~~~~~~---Gl~G~~iV~~~~~~~~~~~~p~~~d~--e~~--l~l~D~~~~~~~~g~~~~~ 196 (340)
T 2bw4_A 124 FKATKPGVFVYHCAPEGMVPWHVTS---GMNGAIMVLPRDGLKDEKGQPLTYDK--IYY--VGEQDFYVPKDEAGNYKKY 196 (340)
T ss_dssp EECCSCEEEEEECCCTTCHHHHHHT---TCEEEEEEECTBCEECTTSCEECCSE--EEE--EEEEEECCCBCTTSCBCCC
T ss_pred EECCCCeEEEEEcCCCCchhhHHhC---cCEEEEEEccCcCcccccCCCcCcce--eEE--EeeeeeeeccccCCccccc
Confidence 6778999999999985 57777 999999987653100 0 000000 000 01122211 0000
Q ss_pred --------------CCCCCCeEEEcCCCCCC-CceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccC-C
Q 013875 67 --------------FLALNPTYIINSAPFYL-DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK-P 130 (434)
Q Consensus 67 --------------~~~~~d~~lvNG~~~~~-~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~-p 130 (434)
....++.++|||+.... ..+.++|++|+++||+++|.+....+ ..+++|.|+|++ ||.++. |
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~~-~~i~gh~~~Vi~-dG~~~~~p 274 (340)
T 2bw4_A 197 ETPGEAYEDAVKAMRTLTPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRP-HLIGGHGDYVWA-TGKFRNPP 274 (340)
T ss_dssp CSHHHHHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCE-EEETCCEEEEET-TCCTTSCC
T ss_pred ccccccccchhhHhhcCCCCEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccce-EEecCcceEEeC-CCcccCCc
Confidence 02357899999996411 14889999999887666655433333 348999999997 999885 4
Q ss_pred e-eeeEEEeCCCCeEEEEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCC
Q 013875 131 F-TTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPN 187 (434)
Q Consensus 131 ~-~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~ 187 (434)
. .++++.|+||||+||+|++++ +|.|+++....... ......++++|.+..+
T Consensus 275 ~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h----~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 275 DLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEA----FELGAAGHFKVTGEWN 327 (340)
T ss_dssp EEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCCC
T ss_pred cccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHH----HhCCCEEEEEECCCCc
Confidence 4 579999999999999999998 59999998654100 0122568899987544
No 40
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.85 E-value=1.4e-22 Score=217.63 Aligned_cols=88 Identities=19% Similarity=0.278 Sum_probs=78.2
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++++|+|.|.+. ....||||||||.|+|++.+ | .++||+.|+|++++.|+|++|+
T Consensus 369 ~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-g----------------~~~Dtv~l~Pg~~~~v~~~ad~ 430 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-E----------------YKMALYNLYPGVFETVEMLPSK 430 (770)
T ss_dssp CCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-C----------------CEESEEECCTTCCCEEEECCSS
T ss_pred CeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-C----------------ceeeEEEECCCeEEEEEEEeCC
Confidence 3678899999999999762 13489999999999998763 1 2899999999999999999999
Q ss_pred ceeeEEeecchhhHHccceeEEEEec
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVED 416 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~~ 416 (434)
||.|+||||+++|++.|||++|.|..
T Consensus 431 pG~w~~hcH~~~H~~~GM~~~~~V~s 456 (770)
T 2r7e_B 431 AGIWRVECLIGEHLHAGMSTLFLVYS 456 (770)
T ss_dssp CBCCCBCCCSHHHHTTBCCCCCCBCC
T ss_pred CCceEEEecccccccccccccccccc
Confidence 99999999999999999999999853
No 41
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.84 E-value=5e-21 Score=195.27 Aligned_cols=169 Identities=15% Similarity=0.216 Sum_probs=120.2
Q ss_pred CcccCCCceEEeccCC---CcccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhc----cCC--------
Q 013875 2 LKRSKSKARKWVCHRT---CQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKN----SFG-------- 66 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~~---~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~-------- 66 (434)
|++.|+||||||||.. .|+.. ||+|+|||.+++. +... +. +.. .+++++... ..+
T Consensus 248 ~~~~~~G~~~yh~h~~~~~~~~~~---Gl~g~l~v~~~~~--~P~~-d~--~~~--~~~~~~~~~~~~~~~g~~~~~~~~ 317 (447)
T 2dv6_A 248 FKALIPGIYVYHCATPSVPTHITN---GMYGLLLVEPEGG--LPQV-DR--EFY--VMQGEIYTVKSFGTSGEQEMDYEK 317 (447)
T ss_dssp EECCSCEEEEEECCSSSHHHHHHT---TCEEEEEEECTTC--SCCC-SE--EEE--EEEEEECBSSCTTCCEECCBBHHH
T ss_pred EECCCCeEEEEEeCCCChHHHHhC---CCEEEEEEeCCCC--CCCC-Ce--eEE--EEecccccCCcccccccccCChHH
Confidence 6788999999999974 45556 9999999766431 1110 00 000 000111000 000
Q ss_pred -CCCCCCeEEEcCCCCC-CCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCC-e-eeeEEEeCCCC
Q 013875 67 -FLALNPTYIINSAPFY-LDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKP-F-TTEAILIAPGQ 142 (434)
Q Consensus 67 -~~~~~d~~lvNG~~~~-~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p-~-~~~~~~l~~ge 142 (434)
....++.++|||+... .....++|++|++|||||+|++....+.|+|+||+|+||+.||++++| . ..+++.|.|||
T Consensus 318 ~~~~~~~~~~iNG~~~~~~~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~ 397 (447)
T 2dv6_A 318 LINEKPEYFLFNGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGG 397 (447)
T ss_dssp HHTTCCSEEEETTSTTCCCCCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTTE
T ss_pred hhccCCCEEEECCcccCCCCCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCCc
Confidence 0124689999999651 012479999999999999999988899999999999999999999954 4 58999999999
Q ss_pred eEEEEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCC
Q 013875 143 TTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIP 186 (434)
Q Consensus 143 R~dv~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~ 186 (434)
|++|+|++++ +|.|+++....... .....++++|.+..
T Consensus 398 r~~i~~~~~~-pG~~~~hch~~~h~-----~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 398 ATIVDFKIDR-AGRYILVDHALSRL-----EHGLVGFLNVDGPK 435 (447)
T ss_dssp EEEEEEECCS-CEEEEEEESSGGGG-----GGTCCEEEEECSCS
T ss_pred EEEEEEECCC-CEEEEEEecCcCcc-----ccCCEEEEEEeCCC
Confidence 9999999997 59999998754321 12357899997654
No 42
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.84 E-value=1.6e-21 Score=187.34 Aligned_cols=146 Identities=17% Similarity=0.234 Sum_probs=109.2
Q ss_pred CcccCCCceEEeccCC---CcccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccCCCCCCCCeEEEcC
Q 013875 2 LKRSKSKARKWVCHRT---CQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYIINS 78 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~~---~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG 78 (434)
|++.++||||||||.. .|+.. ||+|+|||.+++... . .+ .+.. ++++++..+. ...++.++|||
T Consensus 121 f~~~~~Gt~~yH~H~~~~~~~~~~---Gl~G~liV~~~~~~~--~-~d--~e~~--l~~~d~~~~~---g~~~~~~~iNG 187 (288)
T 3gdc_A 121 FDATPFGTHLYHCHQSPLAPHIAK---GLYGGFIVEPKEGRP--P-AD--DEMV--MVMNGYNTDG---GDDNEFYSVNG 187 (288)
T ss_dssp EECCSCEEEEEECCCSSHHHHHHT---TCEEEEEEECSSCCC--C-CS--EEEE--EEEEEECCSS---TTCCSEEEETT
T ss_pred EEcCCCccEEEEecCcchHHHHhC---cCeEEEEEeCCccCC--C-Cc--ceEE--EEEeeEecCC---CCCcceEEECc
Confidence 6789999999999996 46666 999999987765321 0 00 1111 1333333331 12468999999
Q ss_pred CCCCCCceeEEEeCCcEEEEEEEecCCCC-eeEEEEcCCeeEEEEeCCccc-CCeeeeEEEeCCCCeEEEEEEeCCCCCc
Q 013875 79 APFYLDTFAMEVESGKTYLLRIINAALND-ELFFAIAGHNFTVVEVDAVYT-KPFTTEAILIAPGQTTNVLVQANQKPGR 156 (434)
Q Consensus 79 ~~~~~~~~~~~v~~g~~~rlR~iN~~~~~-~~~~~i~g~~~~via~DG~~~-~p~~~~~~~l~~geR~dv~v~~~~~~g~ 156 (434)
+.+......+++++|+++|||++|++... .+.|+|+||.|+|++ +|..+ .|...+++.|.||||++++++++++ |.
T Consensus 188 ~~~~~~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~~p-G~ 265 (288)
T 3gdc_A 188 LPFHFMDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTPSEYTDTISQVQGQRGILELRFPYP-GK 265 (288)
T ss_dssp STTHHHHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSCSEEESEEEEETTCEEEEEECCCSC-EE
T ss_pred ccccccCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCCCceeeEEEeCCCceEEEEEECCCC-EE
Confidence 96410124689999999999999999654 789999999999997 55555 6788999999999999999999875 99
Q ss_pred eEEEEe
Q 013875 157 YFMAAR 162 (434)
Q Consensus 157 ~~l~a~ 162 (434)
|.+.-.
T Consensus 266 ~~~hCH 271 (288)
T 3gdc_A 266 FMFHAH 271 (288)
T ss_dssp EEEECS
T ss_pred EEEEec
Confidence 987754
No 43
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.83 E-value=7.3e-19 Score=172.31 Aligned_cols=93 Identities=22% Similarity=0.216 Sum_probs=74.2
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCC-ccceeEecCCcEEEEEEEcC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPI-ERNTAAVPTGGWTAIRFRAD 389 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~-~rDTv~vp~~g~v~irf~ad 389 (434)
.+.++.|++++|++.|.+ ...|++++|||.|.|++ .|.+. ..|. ++||+.|.||+.+.+.|.++
T Consensus 226 ~l~v~~Ger~Rl~n~~~~---~~~~~h~i~~h~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~v~a~ 290 (333)
T 1mzy_A 226 ALKAKVGDNVLFVHSQPN---RDSRPHLIGGHGDLVWE--TGKFH----------NAPERDLETWFIRGGTAGAALYKFL 290 (333)
T ss_dssp CEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEEEEEEECC
T ss_pred ceEecCCCEEEEEECCCC---CccccEEECCCCeEEEe--CCccc----------CCCccCcceEEECCCceEEEEEEcC
Confidence 488999999998877743 23344447788888886 24321 1122 58999999999999999999
Q ss_pred CceeeEEeecchhhH-HccceeEEEEecCC
Q 013875 390 NPGVWFMHCHLELHT-GWGLKTAFAVEDGP 418 (434)
Q Consensus 390 npG~w~~HCHil~H~-d~GM~~~~~v~~~~ 418 (434)
+||.|+||||++.|+ +.|||++|.|....
T Consensus 291 ~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 291 QPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp SCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred CCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 999999999999997 99999999998654
No 44
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.80 E-value=3.8e-21 Score=206.11 Aligned_cols=86 Identities=14% Similarity=0.201 Sum_probs=77.1
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++++|.|.|.+.. .+.||||||||.|+|++. ++||+.|.|++.+.++|++|+
T Consensus 245 ~l~v~~Ge~vrlrliN~g~~-~~~h~~hlhGh~f~Vvg~--------------------~~Dtv~v~Pg~~~~v~~~~~~ 303 (742)
T 2r7e_A 245 GLIGCHRKSVYWHVIGMGTT-PEVHSIFLEGHTFLVRNH--------------------RQASLEISPITFLTAQTLLMD 303 (742)
T ss_dssp CCEECSSSCEEEECCCCCSS-SCCCCCCCTTCCCEETTE--------------------ECCSCCCCTTCCCEEEECCCS
T ss_pred ceEEcCCCEEEEEEEeCCCC-CcceEEEECCCEEEEEeE--------------------ecceEEeCCCcEEEEEEEeCC
Confidence 37899999999999997621 237999999999999732 589999999999999999999
Q ss_pred ceeeEEeecchhhHHccceeEEEEecC
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVEDG 417 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~~~ 417 (434)
||.|+||||+++|++.|||++|.|...
T Consensus 304 pG~w~~hCH~~~H~~~GM~~~~~V~~~ 330 (742)
T 2r7e_A 304 LGQFLLFCHISSHQHDGMEAYVKVDSC 330 (742)
T ss_dssp CSEECCCCCSSSSSTTSCCBCEEECCC
T ss_pred CeeEEEEeCChhHHhCCCeEEEEEecC
Confidence 999999999999999999999999754
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.80 E-value=5.7e-20 Score=178.47 Aligned_cols=134 Identities=13% Similarity=0.179 Sum_probs=103.3
Q ss_pred CcccCCCceEEeccCCCc------ccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccCCCCCCCCeEE
Q 013875 2 LKRSKSKARKWVCHRTCQ------MHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYI 75 (434)
Q Consensus 2 ~~~~~~Gt~wYH~H~~~q------~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 75 (434)
+++.++||||||||...+ +.. ||+|+|||.+++... .+ ++.. ++++ -++
T Consensus 110 ~~~~~~gt~~YH~h~~~~~~~~~~~~~---Gl~G~liV~~~~~~~----~d--~e~~--l~~~--------------d~t 164 (313)
T 3tas_A 110 WRAGSAGYWHYHDHVVGTEHGTGGIRN---GLYGPVIVRRKGDVL----PD--RTHT--IVFN--------------DMT 164 (313)
T ss_dssp EECCSCEEEEEECSSSSSTTCHHHHHH---TCEEEEEEECTTCBC----CS--EEEE--EEEE--------------TTE
T ss_pred ccCCCceEEEEeecCcccccchhhhhc---cccCceEeecccccc----cc--ccce--eecc--------------chh
Confidence 356789999999998544 345 999999987765421 11 1111 1111 247
Q ss_pred EcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCccc---CCeeeeEEEeCCCCeEEEEEEeCC
Q 013875 76 INSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT---KPFTTEAILIAPGQTTNVLVQANQ 152 (434)
Q Consensus 76 vNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~---~p~~~~~~~l~~geR~dv~v~~~~ 152 (434)
+||+.. ...+.++++.|++|||||+|++. ..+.|+|+||.|+|++.||... .|..++++.|.||||++++|.+.+
T Consensus 165 ~Ng~~~-~~~~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~ 242 (313)
T 3tas_A 165 INNRPA-HTGPDFEATVGDRVEFVMITHGE-YYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGE 242 (313)
T ss_dssp ETTCCT-TCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTT
T ss_pred cccCCc-ccccccccccCCEEEEEEecccc-cceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEecc
Confidence 899876 44678999999999999999995 5678999999999999998766 478899999999999999998875
Q ss_pred C--CCceEEEEe
Q 013875 153 K--PGRYFMAAR 162 (434)
Q Consensus 153 ~--~g~~~l~a~ 162 (434)
. ||.|.+.-.
T Consensus 243 ~~nPG~w~~HCH 254 (313)
T 3tas_A 243 GVGAGAWMYHCH 254 (313)
T ss_dssp TTCSEEEEEEEC
T ss_pred CCCCEeEEEEeC
Confidence 3 688877755
No 46
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.79 E-value=9.7e-18 Score=164.53 Aligned_cols=255 Identities=16% Similarity=0.151 Sum_probs=154.1
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCC-CCeeEEEEcCCeeEEEEeCCc-ccCCeeeeEEEeCCCCeEEEEEE
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAAL-NDELFFAIAGHNFTVVEVDAV-YTKPFTTEAILIAPGQTTNVLVQ 149 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~-~~~~~~~i~g~~~~via~DG~-~~~p~~~~~~~l~~geR~dv~v~ 149 (434)
..+++||+. ..|.++++.|+++++|+.|... ...+.++++|+.. .||+ .+. .|.|||+++..++
T Consensus 54 ~~~~~ng~~---pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~~~~-------~i~pG~~~~y~f~ 119 (336)
T 1oe1_A 54 QAMTFNGSM---PGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGAKLT-------NVNPGEQATLRFK 119 (336)
T ss_dssp EEEEETTBS---SCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGGGGC-------CBCTTEEEEEEEE
T ss_pred EEEEECCcc---CCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCcceE-------EeCCCCEEEEEEE
Confidence 578999984 3589999999999999999864 3567788888752 3443 322 3899999999999
Q ss_pred eCCCCCceEEEEeccCCC-CCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCccc
Q 013875 150 ANQKPGRYFMAARPFNDA-PIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKV 228 (434)
Q Consensus 150 ~~~~~g~~~l~a~~~~~~-~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~ 228 (434)
+++ +|+||......... ........+.-|++-......+ .+ .+...
T Consensus 120 ~~~-~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~---~~-----------------------------~~~~~ 166 (336)
T 1oe1_A 120 ADR-SGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDP---QG-----------------------------KPLHY 166 (336)
T ss_dssp CCS-CEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCT---TS-----------------------------CBCCC
T ss_pred CCC-CeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCccc---cc-----------------------------CcccC
Confidence 987 59999997642100 0000112233333321110000 00 00111
Q ss_pred ceEEEEEec-cCCCCCC-------------------ccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCC
Q 013875 229 DRKLFYTIG-FGKDSCP-------------------TCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKP 288 (434)
Q Consensus 229 ~~~~~l~~~-~~~~~~~-------------------~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~ 288 (434)
|+++.+.+. +.....+ .+.+.....++|||+.+..
T Consensus 167 D~e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~------------------------- 221 (336)
T 1oe1_A 167 DRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGAL------------------------- 221 (336)
T ss_dssp SEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTT-------------------------
T ss_pred CceeEeeeeeeeeccccCCceeecccccccccchhhHhhcCCCCEEEECCeeccC-------------------------
Confidence 233322111 0000000 0000001123444432210
Q ss_pred CCCCCCCCCCCCCCCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCC
Q 013875 289 PKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDP 368 (434)
Q Consensus 289 p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p 368 (434)
.+.+.+.++.|++++|+..+.+ ...+++++|||.|.|+. .|.+ ..|
T Consensus 222 ------------------~~~~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~--DG~~-----------~~p 267 (336)
T 1oe1_A 222 ------------------TGANALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE--TGKF-----------ANP 267 (336)
T ss_dssp ------------------SGGGCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET--TCCT-----------TSC
T ss_pred ------------------CCCcceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC--CCcC-----------cCC
Confidence 0124588999999998666543 34566668999999995 3432 223
Q ss_pred C--ccceeEecCCcEEEEEEEcCCceeeEEeecchhhH-HccceeEEEEecCCCCCC-CCCCCCCCCC
Q 013875 369 I--ERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHT-GWGLKTAFAVEDGPGPDQ-SVLPPPTDLP 432 (434)
Q Consensus 369 ~--~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~H~-d~GM~~~~~v~~~~~~~~-~~~~~p~~~~ 432 (434)
+ +.||+.|++|+.+.+.+.+++||.|+||||.+.|. +.||+++|.|+....+.- .....|..+|
T Consensus 268 ~~~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~~~~~~~~~~~~~~ 335 (336)
T 1oe1_A 268 PQRDLETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAPIP 335 (336)
T ss_dssp CEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCTTTCCCSSCSCCCC
T ss_pred ccccceEEEECCCCcEEEEEEcCCCceEEEEechhhccccCCCeEEEEECCCCChHHhccCCCCCCCC
Confidence 2 47999999999999999999999999999999986 999999999986543222 3344554444
No 47
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.79 E-value=4e-21 Score=186.11 Aligned_cols=140 Identities=11% Similarity=0.130 Sum_probs=86.7
Q ss_pred CCceEEeccCCC--cccCCCCCCCcceEEecCChhH---HHHhhhccCcchHHHHHHhhhhccCCCCCCCCeEEEcCCCC
Q 013875 7 SKARKWVCHRTC--QMHTQSTGSQGPSFHVLRNVRK---LSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYIINSAPF 81 (434)
Q Consensus 7 ~Gt~wYH~H~~~--q~~~~~~Gl~G~liv~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~ 81 (434)
+||||||||... |+.. ||+|+|||.+++... .....+ .+. -++++++..+..-....++.++|||+..
T Consensus 139 ~GT~wYHsH~~~~~q~~~---GL~G~liV~~~~~~~~~~~~~~~d--~e~--~l~~~d~d~~~~~~~~~~~~~~ING~~~ 211 (306)
T 1sdd_A 139 CLTHIYYSYVNLVEDFNS---GLIGPLLICKKGTLTEDGTQKMFE--KQH--VLMFAVFDESKSWNQTSSLMYTVNGYVN 211 (306)
T ss_dssp EEEEEEECCSSSHHHHHT---TCCEEEEEECTTCBCTTSSBSSSC--CCC--CCBCCEEETTSSSSCCCCEEECSSSCCS
T ss_pred ceEEEEeccCCchhhhcc---CceEEEEEccCCCCCccCCcCccc--ceE--EEEEEecccccccccCCCcceeeCCEec
Confidence 489999999877 6677 999999987653211 000011 111 1233333211100113467899999964
Q ss_pred CCCceeEEEeCCcEEEEEEEecCCC-CeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEE
Q 013875 82 YLDTFAMEVESGKTYLLRIINAALN-DELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMA 160 (434)
Q Consensus 82 ~~~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~ 160 (434)
...+.++|++|+++||||+|+++. ..+.|+++||.|.+ || ..++++.|.||||+|++|+++++ |.|++.
T Consensus 212 -~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~pger~~v~~~~~~p-G~~~~h 281 (306)
T 1sdd_A 212 -GTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVSATSTTANMTVSPE-GRWTIA 281 (306)
T ss_dssp -SCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEETTCCBC---------CCCCCB
T ss_pred -CCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECCCcEEEEEEEcCCC-eEEEEE
Confidence 224789999999999999999987 56789999999875 87 35889999999999999999875 999887
Q ss_pred Eec
Q 013875 161 ARP 163 (434)
Q Consensus 161 a~~ 163 (434)
...
T Consensus 282 ch~ 284 (306)
T 1sdd_A 282 SLI 284 (306)
T ss_dssp CCS
T ss_pred eCC
Confidence 664
No 48
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.78 E-value=3.4e-18 Score=173.96 Aligned_cols=249 Identities=15% Similarity=0.162 Sum_probs=158.8
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCC-CCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEe
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAAL-NDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQA 150 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~-~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~ 150 (434)
..+++||+. ..|.++++.|+++++|+.|... ...+.++++|+. ..||.... ..|.||+++++.+++
T Consensus 49 ~~~~~ng~~---pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~~------~~i~pg~~~~y~f~~ 115 (442)
T 2zoo_A 49 VFWSFGETV---PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAES------SFTAPGHTSTFNFKA 115 (442)
T ss_dssp EEEEETTBS---SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGGG------CCBCTTCEEEEEEEC
T ss_pred EEEEECCcC---CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCcc------EEECCCCEEEEEEEc
Confidence 578999984 3689999999999999999964 357789999975 47886531 258999999999999
Q ss_pred CCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccce
Q 013875 151 NQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDR 230 (434)
Q Consensus 151 ~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~ 230 (434)
++ +|.||+......... .......+.|.+..... + |.. |..... -+.+..... ... .. .
T Consensus 116 ~~-~Gt~~yH~H~~~~~~--~~~~Gl~G~~iv~~~~~-----~---~~~-d~e~~l----~l~d~~~~~---~~~-~~-~ 174 (442)
T 2zoo_A 116 LN-PGLYIYHCATAPVGM--HIANGMYGLILVEPKEG-----L---APV-DREYYL----VQGDFYTKG---EFG-EA-G 174 (442)
T ss_dssp CS-CEEEEEECCCSSHHH--HHHTTCEEEEEEECTTC-----C---CCC-SEEEEE----EEEEECBSS---CTT-CC-E
T ss_pred CC-CeEEEEecCCCChHH--HHhCccEEEEEEeCCCC-----C---CCC-CceEEE----EeeeeeccC---ccc-cc-c
Confidence 87 599999874210000 00011233344432211 0 110 100000 000000000 000 00 0
Q ss_pred EEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCccccee
Q 013875 231 KLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATR 310 (434)
Q Consensus 231 ~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 310 (434)
.. ...... ..+...-.++|||+.+... ..+
T Consensus 175 ~~--~~~~~~-----~~~~~~~~~liNG~~~~~~-------------------------------------------~~~ 204 (442)
T 2zoo_A 175 LQ--PFDMAK-----AIDEDADYVVFNGSVGSTT-------------------------------------------DEN 204 (442)
T ss_dssp EE--CBCHHH-----HHTTCCSEEEETTSTTTTS-------------------------------------------GGG
T ss_pred cc--cCChhH-----hccCCCCEEEECCCcCCCC-------------------------------------------CCC
Confidence 00 000000 0000112356676543100 012
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++++|.|.|.+ ....|+|||||+.|.|++.+.+. ..|.+.|++.|.||+...|.|++++
T Consensus 205 ~l~v~~G~~vrlrliN~~--~~~~~~~~i~g~~~~vi~~DG~~------------~~p~~~~~~~l~pg~r~~v~v~~~~ 270 (442)
T 2zoo_A 205 SLTAKVGETVRLYIGNGG--PNLVSSFHVIGEIFDTVYVEGGS------------LKNHNVQTTLIPAGGAAIVEFKVEV 270 (442)
T ss_dssp CEEEETTCEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGSS------------CEECSBSEEEECTTEEEEEEEECCS
T ss_pred ceEeCCCCEEEEEEEeCC--CCCceeeEEcCCEEEEEecCCcc------------CCCccceEEEECCCeeEEEEEEcCC
Confidence 478899999999999965 24689999999999999986332 2367899999999999999999999
Q ss_pred ceeeEEeecchhh-HHccceeEEEEecCC
Q 013875 391 PGVWFMHCHLELH-TGWGLKTAFAVEDGP 418 (434)
Q Consensus 391 pG~w~~HCHil~H-~d~GM~~~~~v~~~~ 418 (434)
||.|++|||...| .+.||++.|.|...+
T Consensus 271 ~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 271 PGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp CEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred CCeEEEEecccccccccCceEEEEecCCC
Confidence 9999999999999 599999999998654
No 49
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.78 E-value=1.3e-19 Score=192.70 Aligned_cols=144 Identities=10% Similarity=0.132 Sum_probs=102.2
Q ss_pred CC----ceEEeccCC--CcccCCCCCCCcceEEecCChhHHH-HhhhccCcchHHHHHH------hhhhcc--------C
Q 013875 7 SK----ARKWVCHRT--CQMHTQSTGSQGPSFHVLRNVRKLS-KLLEKTSSLGIDIIYS------NLLKNS--------F 65 (434)
Q Consensus 7 ~G----t~wYH~H~~--~q~~~~~~Gl~G~liv~~~~~~~l~-~~~~~~~~~~~~~~~~------~~~~~~--------~ 65 (434)
+| |||||||.. .|+.. ||+|+|||.+++..... ....+..+.. ++++ ++..+. .
T Consensus 144 ~G~~c~T~wYHsH~~~~~q~~~---GL~G~lIV~~~~~~~~~~~~~~~~~e~~--l~l~~~d~~~~w~~~~~~~~~~~~~ 218 (647)
T 1sdd_B 144 PGSACRAWAYYSAVNPEKDIHS---GLIGPLLICRKGTLDKETNMPVDMREFV--LLFMVFDEKKSWYYDKKPTRSWRRA 218 (647)
T ss_dssp SSCSEEEEEEECCSSHHHHHTT---TCEEEEEEECTTSSCTTSCCCSSCCEEE--EEEEEEEGGGSSCCC----------
T ss_pred CCCCceEEEEccCCCCcccccc---cCccCEEEeeCCCcccccCCCCcceeEE--EEEEeecCccccccccCcccccccC
Confidence 68 999999994 56667 99999998875421100 0000001110 1111 111110 0
Q ss_pred --CCCCCCCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCC-eeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCC
Q 013875 66 --GFLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALND-ELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQ 142 (434)
Q Consensus 66 --~~~~~~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~-~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~ge 142 (434)
.....++.++|||+.. ..+.++|++|++|||||+|+++.. .+.|+++||.|+||+.|| ..++++.|+|||
T Consensus 219 ~~~~~~~~~~~~iNG~~~--~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~ 291 (647)
T 1sdd_B 219 SSEVKNSHEFHAINGMIY--NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGS 291 (647)
T ss_dssp -----CCCEEEEETTBSS--CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTE
T ss_pred CcchhhcCceeccCCEec--CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCe
Confidence 1123468999999963 347899999999999999999865 889999999999999886 468999999999
Q ss_pred eEEEEEEeCCCCCceEEEEec
Q 013875 143 TTNVLVQANQKPGRYFMAARP 163 (434)
Q Consensus 143 R~dv~v~~~~~~g~~~l~a~~ 163 (434)
|+||+|+++++ |.|.+....
T Consensus 292 r~~v~~~~~~p-G~w~~hch~ 311 (647)
T 1sdd_B 292 FKTLEMKASKP-GWWLLDTEV 311 (647)
T ss_dssp EEEEEEECCSS-EEEEEECCC
T ss_pred EEEEEEEeccc-eEeecccCc
Confidence 99999999985 998887654
No 50
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.75 E-value=1.5e-18 Score=167.28 Aligned_cols=134 Identities=15% Similarity=0.134 Sum_probs=100.0
Q ss_pred cCCCceEEeccCCCcccC---CCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccCCCCCCCCeEEEcCCCC
Q 013875 5 SKSKARKWVCHRTCQMHT---QSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYIINSAPF 81 (434)
Q Consensus 5 ~~~Gt~wYH~H~~~q~~~---~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~ 81 (434)
.++||||||||...+... ...||+|+|||.+++... .+ ++..+ + -+.+.+||+..
T Consensus 129 ~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~~----~d--~e~~l--~--------------~~~~~~Ng~~~ 186 (299)
T 3t9w_A 129 GTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDLL----PK--RQFTV--V--------------FNDMMINNRAH 186 (299)
T ss_dssp CCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC----CS--EEEEE--E--------------EETTEETTCCT
T ss_pred CCceeEEEecCCcccccchhhhcccccceEEEecccccC----cc--cccee--e--------------eeeeeecCccc
Confidence 588999999998543221 123999999987654321 11 11110 1 13457899876
Q ss_pred CCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccC---CeeeeEEEeCCCCeEEEEEEeCCC--CCc
Q 013875 82 YLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK---PFTTEAILIAPGQTTNVLVQANQK--PGR 156 (434)
Q Consensus 82 ~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~---p~~~~~~~l~~geR~dv~v~~~~~--~g~ 156 (434)
...+.++++.|+++|||++|++.. .+.|+|+||.|+|+..|+.... +...|++.|.||||++++|.+.+. ||.
T Consensus 187 -~~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~ 264 (299)
T 3t9w_A 187 -HDAPTFEANLGERVEWIAIGHGSN-FHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGM 264 (299)
T ss_dssp -TCCCEEEEETTCEEEEEEEEESSC-CCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEE
T ss_pred -cccccceecCCCEEEEEEEecccc-ceeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCee
Confidence 457889999999999999999964 5779999999999999887663 456799999999999999987653 699
Q ss_pred eEEEEe
Q 013875 157 YFMAAR 162 (434)
Q Consensus 157 ~~l~a~ 162 (434)
|.+.-.
T Consensus 265 w~~HCH 270 (299)
T 3t9w_A 265 WMYHCH 270 (299)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 887754
No 51
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.74 E-value=1.7e-18 Score=165.15 Aligned_cols=130 Identities=13% Similarity=0.167 Sum_probs=100.4
Q ss_pred CCCceEEeccCC------CcccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccCCCCCCCCeEEEcCC
Q 013875 6 KSKARKWVCHRT------CQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYIINSA 79 (434)
Q Consensus 6 ~~Gt~wYH~H~~------~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~ 79 (434)
++||||||||.. .|+.. ||+|+|||.+++... .+ ++..+ ++ +.++|||+
T Consensus 108 ~~gt~~YH~h~~~~~~~~~~~~~---Gl~G~liV~~~~~~~----~d--rE~~l--~l--------------~~~~iNG~ 162 (276)
T 3kw8_A 108 SAGYWHYHDHVVGTEHGTGGIRN---GLYGPVIVRRKGDVL----PD--ATHTI--VF--------------NDMTINNR 162 (276)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHH---TCEEEEEEECTTCCC----CS--EEEEE--EE--------------ETTEETTC
T ss_pred CCEEEEEecCccccccchhhhhC---ccEEEEEEecCCCcc----cc--cceEE--Ee--------------ccccccee
Confidence 479999999984 46777 999999987765421 11 11111 11 12599999
Q ss_pred CCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCccc----CCeeeeEEEeCCCCeEEEEEEeCC--C
Q 013875 80 PFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT----KPFTTEAILIAPGQTTNVLVQANQ--K 153 (434)
Q Consensus 80 ~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~----~p~~~~~~~l~~geR~dv~v~~~~--~ 153 (434)
.. ...+.++++.|+++||||+|.+. ..+.|+|+||.|++++ ||... .+...+++.|.|||++++++++++ .
T Consensus 163 ~~-~~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~n 239 (276)
T 3kw8_A 163 KP-HTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVG 239 (276)
T ss_dssp CT-TCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTC
T ss_pred cc-cCCCCEEEecCCEEEEEEecCCC-cceeEEEccceeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCC
Confidence 75 34678999999999999999997 4788999999999975 77543 246789999999999999999986 4
Q ss_pred CCceEEEEec
Q 013875 154 PGRYFMAARP 163 (434)
Q Consensus 154 ~g~~~l~a~~ 163 (434)
+|.|++.-..
T Consensus 240 pG~w~~HCH~ 249 (276)
T 3kw8_A 240 AGAWMYHCHV 249 (276)
T ss_dssp SEEEEEEECS
T ss_pred CCeEEEECCC
Confidence 6999998763
No 52
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.71 E-value=1.3e-18 Score=186.76 Aligned_cols=146 Identities=14% Similarity=0.146 Sum_probs=101.4
Q ss_pred CCCceEEeccCCC--cccCCCCCCCcceEEecCChhHH--------HH---hhhccCcchHHHHHH-hh---hhccCCC-
Q 013875 6 KSKARKWVCHRTC--QMHTQSTGSQGPSFHVLRNVRKL--------SK---LLEKTSSLGIDIIYS-NL---LKNSFGF- 67 (434)
Q Consensus 6 ~~Gt~wYH~H~~~--q~~~~~~Gl~G~liv~~~~~~~l--------~~---~~~~~~~~~~~~~~~-~~---~~~~~~~- 67 (434)
++||||||||... |+.. ||+|+|||.+++.... .+ ++....+.. .+.+. .. ..++...
T Consensus 269 ~~Gt~wYHsh~~~~~q~~~---GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~-swy~~~~~~~~~~~p~~~~ 344 (770)
T 2r7e_B 269 DCKAWAYSSDVDLEKDVHS---GLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETK-SWYFTENMERNCRAPCNIQ 344 (770)
T ss_dssp SEEEEEECCCSSSSHHHHT---SCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSS-SSCTTGGGSSCSCCSSCCC
T ss_pred CCeeEEeeccCCcHHHHhC---CceeeEEECCCcccccccCCCccceEEEEEEeecCccc-cchhccchhhcccCccccc
Confidence 8999999999976 5666 9999999887643110 00 000000000 00000 00 0001000
Q ss_pred ---C---CCCCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCC-CeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCC
Q 013875 68 ---L---ALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALN-DELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAP 140 (434)
Q Consensus 68 ---~---~~~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~ 140 (434)
+ ...+.++|||+.. ...+.++|++|++|||||+|++.. ..+.|+|+||.|+|++.||. ..+++.|.|
T Consensus 345 ~~d~~~~~~~~~~~ING~~~-~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~P 418 (770)
T 2r7e_B 345 MEDPTFKENYRFHAINGYIM-DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYP 418 (770)
T ss_dssp SSSSSSTTTSCEECTTSCTT-TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCT
T ss_pred cCCccccccCCccccCCccC-CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECC
Confidence 0 1235689999965 235678999999999999999865 47889999999999999974 789999999
Q ss_pred CCeEEEEEEeCCCCCceEEEEe
Q 013875 141 GQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 141 geR~dv~v~~~~~~g~~~l~a~ 162 (434)
|||++|+|+++++ |.|.+...
T Consensus 419 g~~~~v~~~ad~p-G~w~~hcH 439 (770)
T 2r7e_B 419 GVFETVEMLPSKA-GIWRVECL 439 (770)
T ss_dssp TCCCEEEECCSSC-BCCCBCCC
T ss_pred CeEEEEEEEeCCC-CceEEEec
Confidence 9999999999885 99877655
No 53
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.65 E-value=1.3e-16 Score=156.46 Aligned_cols=146 Identities=13% Similarity=0.163 Sum_probs=103.5
Q ss_pred CCCceEEeccCC------CcccCCCCCCCcceEEecCChhHHHHhhhccCcchHHHHHHhhhhccCCCCCCCCeEEEcCC
Q 013875 6 KSKARKWVCHRT------CQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYIINSA 79 (434)
Q Consensus 6 ~~Gt~wYH~H~~------~q~~~~~~Gl~G~liv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~ 79 (434)
++||||||||.. .|+.. ||+|++||.+++... .+ .+.. +++ +.++|||+
T Consensus 149 ~~Gt~~YH~h~~~~~~~~~~~~~---Gl~G~~iV~~~~~~~----pd--~e~~--l~~--------------~d~~iNG~ 203 (343)
T 3cg8_A 149 SAGYWHYHDHVVGTEHGTGGIRN---GLYGPVIVRRKGDVL----PD--ATHT--IVF--------------NDMTINNR 203 (343)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHH---TCEEEEEEECTTCCC----CS--EEEE--EEE--------------ETTEETTC
T ss_pred CceEEEEecCccccccchhhhhc---CCeEEEEEecCCCCC----CC--ceEE--EEc--------------ccceeccc
Confidence 469999999972 46666 999999987654321 11 1111 011 12489999
Q ss_pred CCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccC----CeeeeEEEeCCCCeEEEEEEeCC--C
Q 013875 80 PFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK----PFTTEAILIAPGQTTNVLVQANQ--K 153 (434)
Q Consensus 80 ~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~----p~~~~~~~l~~geR~dv~v~~~~--~ 153 (434)
.+ ...+.+++++|++|||||+|.+. ..+.|+|+||.|+|+ .||.+.. +...|++.|.|||++++++++++ .
T Consensus 204 ~~-~~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~ 280 (343)
T 3cg8_A 204 KP-HTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVG 280 (343)
T ss_dssp CT-TCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTC
T ss_pred CC-CCCccEEeCCCCEEEEEEEcCCc-cccccEecCcEEEEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCC
Confidence 64 24578999999999999999996 578899999999997 4675443 35679999999999999999853 4
Q ss_pred CCceEEEEeccCCCCCCCCCcceEEEEEEcC
Q 013875 154 PGRYFMAARPFNDAPIPVDNKTATGILQYKG 184 (434)
Q Consensus 154 ~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~ 184 (434)
+|.|++.-....- ....-.+.+.+..
T Consensus 281 pG~w~~HCHi~~H-----~~~GM~g~~~V~~ 306 (343)
T 3cg8_A 281 AGAWMYHCHVQSH-----SDMGMVGLFLVKK 306 (343)
T ss_dssp SEEEEEEECSHHH-----HHTTCEEEEEEEC
T ss_pred CeeEEEeCCCHHH-----HhccCcEEEEEec
Confidence 6988887653211 0122456677764
No 54
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.25 E-value=5.9e-12 Score=107.21 Aligned_cols=94 Identities=14% Similarity=0.182 Sum_probs=71.5
Q ss_pred eeEeecCCeEEEEEEeCCCCCCC-CCCccccCCceEEE--------EecC-CcCCCCCCCCCCCCCCCCccceeEecCCc
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVE-SHPFHLHGYNFFVV--------GTGI-GNFDPVKYPANYNLVDPIERNTAAVPTGG 380 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~-~HP~HlHG~~F~Vl--------~~g~-g~~~~~~~~~~~n~~~p~~rDTv~vp~~g 380 (434)
.+.++.|++|+|+|.|.+ .+ .|.||+|+....+. ..+. ..+.+. -....++||..|.|++
T Consensus 36 ~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~-------~~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA-------DKSNIIAESPLANGNE 105 (139)
T ss_dssp EEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS-------CCTTEEEECCCBCTTC
T ss_pred eEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCc-------ccccccccccccCCCC
Confidence 478999999999999975 56 89999998643111 0000 011111 0123578999999999
Q ss_pred EEEEEEEcCCceeeEEeecchhhHHccceeEEEEe
Q 013875 381 WTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 381 ~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
...+.|.+++||.|.||||+..|.+ ||++.|.|+
T Consensus 106 t~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 106 TVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 9999999999999999999999999 999999873
No 55
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.20 E-value=2.9e-11 Score=97.49 Aligned_cols=85 Identities=15% Similarity=0.221 Sum_probs=65.8
Q ss_pred eeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEc-
Q 013875 310 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA- 388 (434)
Q Consensus 310 ~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~a- 388 (434)
+.+.++.|++|+| .|.+ ...|++|+||..|... .|.. .+....++..|.||+...++|.+
T Consensus 19 ~~i~v~~Gd~V~~--~N~~---~~~H~v~~~~~~~~~~---~g~~-----------~~~~~~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 19 ANVTVHPGDTVKW--VNNK---LPPHNILFDDKQVPGA---SKEL-----------ADKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp SEEEECTTEEEEE--EECS---SCCEEEEECTTSSGGG---CHHH-----------HHHHCEEEEECSTTCEEEEEECTT
T ss_pred CEEEEcCCCEEEE--EECC---CCCCeEEEeCCCCCcc---cccc-----------cccccccccccCCCCeEEEEEecC
Confidence 3488999999987 4754 5789999999865431 0000 00112578899999999999999
Q ss_pred CCceeeEEeecchhhHHccceeEEEEe
Q 013875 389 DNPGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 389 dnpG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
+.||.|.|||| .|...||++.|.|+
T Consensus 80 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 80 FPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp SCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 89999999999 79999999999985
No 56
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.20 E-value=8.5e-11 Score=119.13 Aligned_cols=230 Identities=12% Similarity=0.115 Sum_probs=137.7
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeC
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQAN 151 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~ 151 (434)
..+++||+- ..|.|+++.|+++++|+.|... ....++.+|....- ..||.++ .|.|||+++..+++.
T Consensus 36 ~~~~~ng~~---pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~-~~DG~~~--------~I~PG~~~~Y~f~~~ 102 (439)
T 2xu9_A 36 TLLTYGGSF---PGPTLRVRPRDTVRLTLENRLP-EPTNLHWHGLPISP-KVDDPFL--------EIPPGESWTYEFTVP 102 (439)
T ss_dssp EEEEETTBS---SCCEEEECTTCEEEEEEEECSS-SCBCCEEETCCCCT-TTSCTTC--------CBCTTCEEEEEEECC
T ss_pred EEEEECCcc---cCCEEEEeCCCEEEEEEEECCC-CCcceEeCCCCCCc-cccCCcc--------cCCCCCeEEEEEecC
Confidence 578999984 3689999999999999999975 45668888865322 5788641 289999999999975
Q ss_pred C-CCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccce
Q 013875 152 Q-KPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDR 230 (434)
Q Consensus 152 ~-~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~ 230 (434)
+ .+|+||...........+ ......+.|-..+.... .+ .+ ..++
T Consensus 103 ~~~~GT~wYH~H~~~~t~~q-~~~Gl~G~liV~~~~~~----~~----------------~~--------------~~~~ 147 (439)
T 2xu9_A 103 KELAGTFWYHPHLHGRVAPQ-LFAGLLGALVVESSLDA----IP----------------EL--------------REAE 147 (439)
T ss_dssp SSCCEEEEEECCCTTSHHHH-HHTTCCEEEEECCGGGG----SH----------------HH--------------HTSE
T ss_pred CCCCcceEeccCCCCchHHH-HHhhCeEEEEEcCcccc----Cc----------------cC--------------CCCC
Confidence 3 569999998642100000 00112222323221000 00 00 0012
Q ss_pred EEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCccccee
Q 013875 231 KLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATR 310 (434)
Q Consensus 231 ~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 310 (434)
++.+.++ -|.++......... . .... |. .+..+-.+|. ..+
T Consensus 148 e~~l~l~---------------D~~~~~~~~~~~~~--~-~~~~---g~--------~~~~~~iNG~----------~~p 188 (439)
T 2xu9_A 148 EHLLVLK---------------DLALQGGRPAPHTP--M-DWMN---GK--------EGDLVLVNGA----------LRP 188 (439)
T ss_dssp EEEEEEE---------------EECEETTEECCCCH--H-HHHH---CC--------CCSEEEETTE----------ESC
T ss_pred cEEEEEE---------------eeeeCCCCcCCCCc--c-cccc---CC--------CCCEEEECCc----------cCC
Confidence 2222111 01111100000000 0 0000 00 0000011111 123
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.| +++|.|.|.+ ....|.|||+||.|+|++...+.. ..|...|++.|.||+.+.|.+++++
T Consensus 189 ~l~v~~g-~~RlRliN~~--~~~~~~~~i~gh~~~vi~~DG~~~-----------~~p~~~~~l~l~pgeR~dv~v~~~~ 254 (439)
T 2xu9_A 189 TLVAQKA-TLRLRLLNAS--NARYYRLALQDHPLYLIAADGGFL-----------EEPLEVSELLLAPGERAEVLVRLRK 254 (439)
T ss_dssp EEECSSS-EEEEEEEECC--SSCCEEEEETTBCEEEEEETTEEE-----------EEEEEESCEEECTTCEEEEEEECCS
T ss_pred cEEecCC-eEEEEEEecC--CCceEEEEECCceEEEEecCCCCC-----------CCceEeceEEECCceeEEEEEEcCC
Confidence 4789999 9999999976 345799999999999999863321 2456789999999999999999999
Q ss_pred ceeeEEeecchh
Q 013875 391 PGVWFMHCHLEL 402 (434)
Q Consensus 391 pG~w~~HCHil~ 402 (434)
+|.|.++|+...
T Consensus 255 ~G~~~l~~~~~~ 266 (439)
T 2xu9_A 255 EGRFLLQALPYD 266 (439)
T ss_dssp SEEEEEEEECCC
T ss_pred CceEEEEecccc
Confidence 999999998543
No 57
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.06 E-value=4.7e-09 Score=109.37 Aligned_cols=259 Identities=14% Similarity=0.126 Sum_probs=145.4
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEE-EeCCcccCCeeeeEEEeCCCCeEEEEEEe
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVV-EVDAVYTKPFTTEAILIAPGQTTNVLVQA 150 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~vi-a~DG~~~~p~~~~~~~l~~geR~dv~v~~ 150 (434)
..+++||+- ..|.|+++.|+++++++.|........|+.+|....-. ..||.+- +.+-.|.|||++...+++
T Consensus 23 ~~~~~Ng~~---PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~PG~s~tY~f~~ 95 (552)
T 1aoz_A 23 IVMGINGQF---PGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTAS----ISQCAINPGETFFYNFTV 95 (552)
T ss_dssp EEEEETTBS---SCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEEC
T ss_pred EEEEECCcc---CCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcc----cccCCcCCCCeEEEEEEC
Confidence 589999984 36899999999999999999865667788888543211 1688773 233457999999999999
Q ss_pred CCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccce
Q 013875 151 NQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDR 230 (434)
Q Consensus 151 ~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~ 230 (434)
++ +|+||....... . ......+.|-..+......+ . + .|..... -+.+..... ....
T Consensus 96 ~~-~GT~wYHsH~~~----q-~~~Gl~G~liV~~~~~~~~~-~---~--~d~e~~l----~l~Dw~~~~-----~~~~-- 152 (552)
T 1aoz_A 96 DN-PGTFFYHGHLGM----Q-RSAGLYGSLIVDPPQGKKEP-F---H--YDGEINL----LLSDWWHQS-----IHKQ-- 152 (552)
T ss_dssp CS-CEEEEEEECSTT----T-GGGTCEEEEEEECCTTCCCS-S---C--CSEEEEE----EEEEECSSC-----HHHH--
T ss_pred CC-CEEEEEEECchh----H-HhccCeeeEEEeCCcccCCC-C---C--CCccceE----EeecccCCC-----HHHH--
Confidence 65 599999987421 1 11222333333221111000 0 0 0100000 000000000 0000
Q ss_pred EEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCccccee
Q 013875 231 KLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATR 310 (434)
Q Consensus 231 ~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 310 (434)
. .++..... ...+ ......|||+....-.. ... +.. ....|. .+|. ......
T Consensus 153 --~--~~~~~~~~-~~~~-~~~~~liNG~~~~~c~~--~~~-~~~-~~~~c~-----------~~~~-------~~~~~~ 204 (552)
T 1aoz_A 153 --E--VGLSSKPI-RWIG-EPQTILLNGRGQFDCSI--AAK-YDS-NLEPCK-----------LKGS-------ESCAPY 204 (552)
T ss_dssp --H--HHTTSSSC-CCCC-SCSEEEETTBCCSSSBT--TGG-GCT-TSCBCC-----------CCSC-------STTSCC
T ss_pred --H--hhhhcccc-cCCC-CCCeEEECCccccCccc--Ccc-ccc-cccccc-----------ccCC-------CCCCce
Confidence 0 00000000 0000 11135788875310000 000 000 000000 0000 000112
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++++|.|.|.+ ....+-|||+||.|+|++...+. ..|...|++.|.+|+++.|.+++++
T Consensus 205 ~~~v~~G~~~RlRliNa~--~~~~~~~~i~gh~~~vi~~DG~~------------~~P~~~~~l~i~pgqR~dvlv~~~~ 270 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTT--ALAALNFAIGNHQLLVVEADGNY------------VQPFYTSDIDIYSGESYSVLITTDQ 270 (552)
T ss_dssp CEEECTTCEEEEEEEECC--SSCEEEEEETTCCEEEEEETTEE------------EEEEEESCEEECTTCEEEEEEECCS
T ss_pred EEEEcCCCEEEEEEEccc--ccceEEEEEcCcEEEEEEECCcc------------cCceEEeEEEEcCCcEEEEEEEcCC
Confidence 589999999999999976 24568899999999999985322 2456789999999999999999943
Q ss_pred --ceeeEEeecchh
Q 013875 391 --PGVWFMHCHLEL 402 (434)
Q Consensus 391 --pG~w~~HCHil~ 402 (434)
+|.|.++|+...
T Consensus 271 ~~~g~y~i~~~~~~ 284 (552)
T 1aoz_A 271 NPSENYWVSVGTRA 284 (552)
T ss_dssp CTTCCEEEEEEEES
T ss_pred CCCCCEEEEEEccc
Confidence 799999999764
No 58
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.05 E-value=6.9e-10 Score=112.74 Aligned_cols=226 Identities=13% Similarity=0.114 Sum_probs=138.1
Q ss_pred CCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEe
Q 013875 71 NPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQA 150 (434)
Q Consensus 71 ~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~ 150 (434)
-..+++||+. ..|.|+++.|+++++++.|... ....|+.+|....- +.||.+. -.|.|||+++..+++
T Consensus 38 ~~~~~~ng~~---pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~-~~DG~~~-------~~i~PG~~~~Y~f~~ 105 (451)
T 2uxt_A 38 ASVWGINGRY---LGPTIRVWKGDDVKLIYSNRLT-ENVSMTVAGLQVPG-PLMGGPA-------RMMSPNADWAPVLPI 105 (451)
T ss_dssp SCCEEETTSS---BCCEEEEETTCEEEEEEEECSS-SCBCEEEETCCCCG-GGSCSGG-------GCBCTTCEECCEEEC
T ss_pred eEEEEECCcc---cCceEEEeCCCEEEEEEEECCC-CCccEEECCccCCC-CCCCCCc-------CcCCCCCeEEEEEEc
Confidence 3689999984 3689999999999999999985 46668888864322 3799872 347899999999999
Q ss_pred CCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccce
Q 013875 151 NQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDR 230 (434)
Q Consensus 151 ~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~ 230 (434)
++.+|+||............. .....+.|-........ . ..|.. -.++
T Consensus 106 ~~~~GT~wYH~H~~~~t~~q~-~~Gl~G~liV~~~~~~~---~-~~p~~---------------------------y~~~ 153 (451)
T 2uxt_A 106 RQNAATLWYHANTPNRTAQQV-YNGLAGMWLVEDEVSKS---L-PIPNH---------------------------YGVD 153 (451)
T ss_dssp CSCSEEEEEEECCTTTHHHHH-HTTCEEEEEEECHHHHH---S-SSCCC---------------------------BTTT
T ss_pred CCCCcceEEecCCCCchhhhH-hhcceEEEEEecCcccc---c-CCCcc---------------------------CCCc
Confidence 886799999987422100000 01123333322110000 0 00000 0011
Q ss_pred EEEEEecc-CCCCC-------CccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCC
Q 013875 231 KLFYTIGF-GKDSC-------PTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTAS 302 (434)
Q Consensus 231 ~~~l~~~~-~~~~~-------~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~ 302 (434)
++.+.++- ..... ..+.+...-..+|||+.
T Consensus 154 e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~------------------------------------------ 191 (451)
T 2uxt_A 154 DFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ------------------------------------------ 191 (451)
T ss_dssp EEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE------------------------------------------
T ss_pred eEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc------------------------------------------
Confidence 11111100 00000 00000001123344432
Q ss_pred CCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccc-cCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcE
Q 013875 303 LGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHL-HGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGW 381 (434)
Q Consensus 303 ~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~Hl-HG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~ 381 (434)
.+.+.++.| +++|.|.|.+ ....+.||| |||.|+|++...+.. ..|...|++.|.+|+.
T Consensus 192 ------~p~~~v~~g-~~RlRliNa~--~~~~~~~~i~dg~~~~vi~~DG~~~-----------~~P~~~~~l~l~pgeR 251 (451)
T 2uxt_A 192 ------SPYVEVSRG-WVRLRLLNAS--NSRRYQLQMNDGRPLHVISGDQGFL-----------PAPVSVKQLSLAPGER 251 (451)
T ss_dssp ------SCEEEECSS-EEEEEEEECC--SSCCEEEEETTSCCEEEEECSSSEE-----------EEEEEESSEEECTTCE
T ss_pred ------cceEEecCC-EEEEEEEccC--CceeEEEEECCCCeEEEEEeCCCcc-----------CCceEeceEEECceeE
Confidence 134788999 9999999976 345799999 999999999853221 2456789999999999
Q ss_pred EEEEEEcCCceeeEEeecchh
Q 013875 382 TAIRFRADNPGVWFMHCHLEL 402 (434)
Q Consensus 382 v~irf~adnpG~w~~HCHil~ 402 (434)
+.|.++++.+|.|.++++-..
T Consensus 252 ~dvlv~~~~~~~~~l~~~~~~ 272 (451)
T 2uxt_A 252 REILVDMSNGDEVSITCGEAA 272 (451)
T ss_dssp EEEEEECTTCCCEEEEC----
T ss_pred EEEEEEeCCCCEEEEEecCcc
Confidence 999999988899999988654
No 59
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.01 E-value=1.1e-08 Score=104.85 Aligned_cols=235 Identities=11% Similarity=0.111 Sum_probs=143.4
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCC----CeeEEEEcCCeeEE-EEeCCcccCCeeeeEEEeCCCCeEEE
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALN----DELFFAIAGHNFTV-VEVDAVYTKPFTTEAILIAPGQTTNV 146 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~----~~~~~~i~g~~~~v-ia~DG~~~~p~~~~~~~l~~geR~dv 146 (434)
..+++||+- .-|.|+++.|+++++++.|.-.. ....|+.+|....- -..||.+- +.+-.|.||+++..
T Consensus 23 ~~~~~NG~~---PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~s~tY 95 (499)
T 3pxl_A 23 QAVVVNGVT---PGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAF----INQCPISPGHSFLY 95 (499)
T ss_dssp EEEEETTBS---SCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEE
T ss_pred EEEEECCcc---cCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEE
Confidence 578999984 36899999999999999998764 45678888875421 35788753 22235799999999
Q ss_pred EEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCc
Q 013875 147 LVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQ 226 (434)
Q Consensus 147 ~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~ 226 (434)
.+++.+.+|+||....... .. .....+.|-....... .+......+..... -+.+..... ...
T Consensus 96 ~f~~~~~~GT~wYHsH~~~----q~-~~GL~G~lIV~~~~~~----~~~~~~~d~~~~~l----~l~Dw~~~~----~~~ 158 (499)
T 3pxl_A 96 DFQVPDQAGTFWYHSHLST----QY-CDGLRGPFVVYDPNDP----HASRYDVDNDDTVI----TLADWYHTA----AKL 158 (499)
T ss_dssp EEECSSCCEEEEEEECSTT----GG-GGTCEEEEEEECTTCT----TGGGCSBCSGGGEE----EEEEECSSC----TTT
T ss_pred EEEcCCCCceeeeeccchh----HH-hccceeEEEEcCCccc----ccccCCCCCceEEE----EEEcccCCc----ccc
Confidence 9999655699999987421 11 1223333333221110 00000000100000 000000000 000
Q ss_pred ccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCcc
Q 013875 227 KVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTS 306 (434)
Q Consensus 227 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 306 (434)
. .+... ..-...|||+..... . + .
T Consensus 159 ~--------~~~p~---------~~d~~liNG~~~~~~------------------~-~--------------------~ 182 (499)
T 3pxl_A 159 G--------PRFPG---------GADATLINGKGRAPS------------------D-S--------------------V 182 (499)
T ss_dssp S--------CSSCS---------SCSEEEETTBCCCTT------------------C-T--------------------T
T ss_pred c--------cCCCC---------CCcEEEECCCCcCCC------------------C-C--------------------C
Confidence 0 00000 011356777531100 0 0 0
Q ss_pred cceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEE
Q 013875 307 RATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRF 386 (434)
Q Consensus 307 ~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf 386 (434)
.....+.++.|++++|.|.|.+ ....+.|||+||.|+|++.... +..|...|++.|.+|+++.|.+
T Consensus 183 ~~~~~~~v~~G~~~RlRliNa~--~~~~~~~~i~gh~~~via~DG~------------~~~P~~~~~l~i~pGqR~dvlv 248 (499)
T 3pxl_A 183 AELSVIKVTKGKRYRFRLVSLS--CNPNHTFSIDGHNLTIIEVDSV------------NSQPLEVDSIQIFAAQRYSFVL 248 (499)
T ss_dssp CCCCEEEECTTCEEEEEEEECC--SSCCEEEEETTBCEEEEEETTE------------EEEEEEESBEEECTTCEEEEEE
T ss_pred CCcceEEEcCCCEEEEEEEecC--CCeeEEEEECCCeEEEEEECCc------------ccCceEeeeEEECCCcEEEEEE
Confidence 1234589999999999999976 3467899999999999998522 1346678999999999999999
Q ss_pred EcCCc-eeeEEeecc
Q 013875 387 RADNP-GVWFMHCHL 400 (434)
Q Consensus 387 ~adnp-G~w~~HCHi 400 (434)
+++.+ |.|.+.|..
T Consensus 249 ~~~~~~g~y~i~a~~ 263 (499)
T 3pxl_A 249 DANQAVDNYWIRANP 263 (499)
T ss_dssp ECCSCSSEEEEEEEE
T ss_pred ECCCCCceEEEEEec
Confidence 99875 888888864
No 60
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=98.99 E-value=7.3e-09 Score=106.16 Aligned_cols=237 Identities=10% Similarity=0.080 Sum_probs=143.3
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCC----CeeEEEEcCCeeEE-EEeCCcccCCeeeeEEEeCCCCeEEE
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALN----DELFFAIAGHNFTV-VEVDAVYTKPFTTEAILIAPGQTTNV 146 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~----~~~~~~i~g~~~~v-ia~DG~~~~p~~~~~~~l~~geR~dv 146 (434)
..++|||+- .-|.|+++.|+++++++.|.-.. ....|+.+|....- -..||.+- +.+-.|.||+++..
T Consensus 24 ~~~~~NG~~---PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~sftY 96 (495)
T 3t6v_A 24 PAVNAGGTF---PGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF----ITQCPIIVGNSFSY 96 (495)
T ss_dssp EEEEETTSS---SCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEE
T ss_pred EEEEECCcc---cCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEE
Confidence 588999984 36899999999999999998764 35678888865421 25788753 22335799999999
Q ss_pred EEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCc
Q 013875 147 LVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQ 226 (434)
Q Consensus 147 ~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~ 226 (434)
.+++.+.+|+||....... .. .....+.|-....... . +......+..... -+.+.... ...
T Consensus 97 ~f~~~~~~GT~wYHsH~~~----q~-~~GL~G~lIV~~~~~~---~-~~~~~~d~~e~~l----~l~Dw~~~-----~~~ 158 (495)
T 3t6v_A 97 NFNVPGMAGTYWYHSHLTT----QY-CDGLRGPFVVYDPNDP---D-ANLYDVDDDTTII----TLADWYHV-----LAK 158 (495)
T ss_dssp EEECTTCCEEEEEEECSTT----GG-GGTCEEEEEEECTTCT---T-GGGCSBCSGGGEE----EEEEECSS-----CGG
T ss_pred EEEeCCCCceeeeeccchh----HH-hcCceEEEEEcCcccc---c-cccCCCCCceeEE----EEecccCC-----chh
Confidence 9999655699999987421 11 1122333333221110 0 0000000100000 00000000 000
Q ss_pred ccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCcc
Q 013875 227 KVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTS 306 (434)
Q Consensus 227 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 306 (434)
.. ..+... ..-...|||+..... . +. .
T Consensus 159 ~~------~~~~p~---------~~d~~liNG~g~~~~------------------~-~~-------------------~ 185 (495)
T 3t6v_A 159 EM------GAGGAI---------TADSTLIDGLGRTHV------------------N-VA-------------------A 185 (495)
T ss_dssp GS------CSSSCC---------CCSEEEETTBCCBSS------------------S-CC-------------------C
T ss_pred hh------ccCCCC---------CCcEEEECCcCcCCC------------------C-cc-------------------c
Confidence 00 000000 011356777531100 0 00 0
Q ss_pred cceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEE
Q 013875 307 RATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRF 386 (434)
Q Consensus 307 ~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf 386 (434)
.....+.++.|++++|.|.|.+ ....+.|||+||.|+|++.... +..|...|++.|.+|+++.|.+
T Consensus 186 ~~~~~~~v~~G~~~RlRliN~~--~~~~~~~~i~gh~~~via~DG~------------~~~P~~~~~l~i~pGqR~dvlv 251 (495)
T 3t6v_A 186 VPLSVITVEVGKRYRMRLVSIS--CDPNYDFSIDGHDMTIIETDGV------------DSQELTVDEIQIFAAQRYSFVL 251 (495)
T ss_dssp CCCCEEEECTTCEEEEEEEECC--SSCCEEEEETTCCEEEEEETTE------------EEEEEEESBEEECTTCEEEEEE
T ss_pred CCceEEEEcCCCEEEEEEEecC--CCeeEEEEECCCeEEEEEeCCc------------ccCCEEeeeEEEcCceEEEEEE
Confidence 0234589999999999999976 3467899999999999999522 1346678999999999999999
Q ss_pred EcCCc-eeeEEeecc
Q 013875 387 RADNP-GVWFMHCHL 400 (434)
Q Consensus 387 ~adnp-G~w~~HCHi 400 (434)
+++.+ |.|.++|..
T Consensus 252 ~~~~~~g~y~i~a~~ 266 (495)
T 3t6v_A 252 NANQPVGNYWIRANP 266 (495)
T ss_dssp ECCSCSSEEEEEEEE
T ss_pred ECCCCCceEEEEEec
Confidence 99875 898899864
No 61
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=98.97 E-value=5.8e-09 Score=107.81 Aligned_cols=242 Identities=9% Similarity=0.103 Sum_probs=144.4
Q ss_pred CCeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCC----CeeEEEEcCCeeE-EEEeCCcccCCeeeeEEEeCCCCeEE
Q 013875 71 NPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALN----DELFFAIAGHNFT-VVEVDAVYTKPFTTEAILIAPGQTTN 145 (434)
Q Consensus 71 ~d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~----~~~~~~i~g~~~~-via~DG~~~~p~~~~~~~l~~geR~d 145 (434)
-..+++||+- ..|.|+++.|+++++++.|.-.. ....|+.+|.... --..||.+- +.+-.|.|||+++
T Consensus 43 ~~~~~~NG~~---PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~PG~s~~ 115 (521)
T 1v10_A 43 RSAVTAEGTT---IAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAF----VNQCPIIPNESFV 115 (521)
T ss_dssp EEEEEESSSS---SCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTEEEE
T ss_pred EEEEEECCcc---CCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcc----eeeCCcCCCCeEE
Confidence 3688999984 36899999999999999999862 5667888886531 123788763 1223478999999
Q ss_pred EEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCC
Q 013875 146 VLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVP 225 (434)
Q Consensus 146 v~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p 225 (434)
..++..+.+|+||....... .. .....+.|-..+.... .+..-...+..... -+.+....
T Consensus 116 Y~f~~~~~~GT~wYH~H~~~----q~-~~Gl~G~liV~~~~~~----~~~~~~~d~~e~~l----~l~D~~~~------- 175 (521)
T 1v10_A 116 YDFVVPGQAGTYWYHSHLST----QY-CDGLRGAFVVYDPNDP----HLSLYDVDDASTVI----TIADWYHS------- 175 (521)
T ss_dssp EEEECTTCCEEEEEEECSTT----GG-GGTCEEEEEEECTTCT----TGGGCSBCSGGGEE----EEEEECSS-------
T ss_pred EEEecCCCCccEEEEeccCC----ch-hcCceEEEEEcCCccc----ccccCCCCCceeEE----EEcccccC-------
Confidence 99996555699999987421 11 1123333333221110 00000000000000 01000000
Q ss_pred cccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCc
Q 013875 226 QKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGT 305 (434)
Q Consensus 226 ~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~ 305 (434)
.+.++....+.. .+..-...|||+.+..... .
T Consensus 176 --~~~~~~~~~~~~--------~~~~d~~liNG~~~~~~~~--------------------------------------~ 207 (521)
T 1v10_A 176 --LSTVLFPNPNKA--------PPAPDTTLINGLGRNSANP--------------------------------------S 207 (521)
T ss_dssp --CCC-------CC--------CSCCSEEEETTBCCCSSCG--------------------------------------G
T ss_pred --CHHHHhhccCCC--------CCCCCEEEECCcccCCCCC--------------------------------------C
Confidence 000000000000 0011135677764310000 0
Q ss_pred ccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEE
Q 013875 306 SRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIR 385 (434)
Q Consensus 306 ~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~ir 385 (434)
....+.+.++.|++++|.|.|.+ ....|.|||+||.|.|++...+. ..|...|++.|.+|+...|.
T Consensus 208 ~~~~~~~~v~~G~~~RlRliNa~--~~~~~~~~i~gh~~~vi~~DG~~------------~~p~~~~~l~l~pgqR~dvl 273 (521)
T 1v10_A 208 AGQLAVVSVQSGKRYRFRIVSTS--CFPNYAFSIDGHRMTVIEVDGVS------------HQPLTVDSLTIFAGQRYSVV 273 (521)
T ss_dssp GSCCCEEEECTTCEEEEEEEECC--SSCCEEEEETTCCEEEEEETTEE------------EEEEEESBEEECTTCEEEEE
T ss_pred CCCceEEEECCCCEEEEEEEecC--CcccEEEEECCCeEEEEecCCcc------------ccceeeeeEEEcccceEEEE
Confidence 00124589999999999999976 34578999999999999996322 23567899999999999999
Q ss_pred EEcCC-ceeeEEeecch
Q 013875 386 FRADN-PGVWFMHCHLE 401 (434)
Q Consensus 386 f~adn-pG~w~~HCHil 401 (434)
++++. +|.|.++|+..
T Consensus 274 v~~~~~~g~y~i~~~~~ 290 (521)
T 1v10_A 274 VEANQAVGNYWIRANPS 290 (521)
T ss_dssp EECCSCSSEEEEEEEES
T ss_pred EEcCCCCCceeeeeccc
Confidence 99976 69999999864
No 62
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.93 E-value=2.8e-09 Score=85.88 Aligned_cols=84 Identities=18% Similarity=0.243 Sum_probs=62.8
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEc-C
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA-D 389 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~a-d 389 (434)
.+.++.|++|+|+ |.+ ...|++|+|+..+.. . .|. + .....+|++.+.||+...+.|.+ +
T Consensus 21 ~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~--~-~g~-~----------~~~~~~~~~~~~pG~~~~~~f~~~~ 81 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA--K-SAD-L----------AKSLSHKQLLMSPGQSTSTTFPADA 81 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT--C-CHH-H----------HHHHCBCSCCCSTTCEEEEECCTTC
T ss_pred EEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc--c-ccc-c----------chhccccceeeCCCCEEEEEEecCC
Confidence 4789999999886 653 568999999764310 0 000 0 00011467889999999998888 8
Q ss_pred CceeeEEeecchhhHHccceeEEEEe
Q 013875 390 NPGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 390 npG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
.||.|.|||| .|.++||.+.|.|+
T Consensus 82 ~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 82 PAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCceEEEEeC--ChhhcCcEEEEEEc
Confidence 9999999999 89999999999985
No 63
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.90 E-value=5.5e-08 Score=101.17 Aligned_cols=242 Identities=12% Similarity=0.077 Sum_probs=142.7
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEE-EEeCCcccCCeeeeEEEeCCCCeEEEEEEe
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTV-VEVDAVYTKPFTTEAILIAPGQTTNVLVQA 150 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~v-ia~DG~~~~p~~~~~~~l~~geR~dv~v~~ 150 (434)
..+++||+- .-|.|+++.|+++++++.|.-......||.+|....- -..||.+- +.+-.|.||+.+...+++
T Consensus 87 ~~~~~NG~~---PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~----vTq~pI~PG~sftY~f~~ 159 (580)
T 3sqr_A 87 SAMTFNGTV---PGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPG----VTQCPIAPGDTLTYKFQV 159 (580)
T ss_dssp EEEEETTBS---SCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEEC
T ss_pred EEEEECCcc---CCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCc----cccCCCCCCCeEEEEEEC
Confidence 588999984 3689999999999999999876556678888865321 35788763 233458999999999999
Q ss_pred CCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccce
Q 013875 151 NQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDR 230 (434)
Q Consensus 151 ~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~ 230 (434)
++. |+||..+.... + ......+.|-....... . .|..... --+.+... ........
T Consensus 160 ~q~-GT~WYHsH~~~----q-~~~GL~G~lIV~~p~~~---------~-yD~d~~~---l~l~Dw~~-----~~~~~~~~ 215 (580)
T 3sqr_A 160 TQY-GTTWYHSHFSL----Q-YGDGLFGPLIINGPATA---------D-YDEDVGV---IFLQDWAH-----ESVFEIWD 215 (580)
T ss_dssp CCC-EEEEEEECSTT----G-GGGTCEEEEEEECCCSS---------C-CSEEEEE---EEEEEECS-----SCHHHHHH
T ss_pred CCC-cceEEeecccc----c-ccCcCEEEEEeeCcccC---------C-CCccceE---EEEEEEec-----CCHHHHHH
Confidence 875 99999987411 1 11122333333221110 0 0100000 00000000 00000000
Q ss_pred EEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCccccee
Q 013875 231 KLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATR 310 (434)
Q Consensus 231 ~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 310 (434)
.... ...+..-...|||+.... |.. .. ..+|.......
T Consensus 216 ------~~~~-----~~~~~~d~~liNG~~~~~-----------------c~~--~~------------~~~~~~~~~~~ 253 (580)
T 3sqr_A 216 ------TARL-----GAPPALENTLMNGTNTFD-----------------CSA--ST------------DPNCVGGGKKF 253 (580)
T ss_dssp ------HHTT-----SCCCCBSEEEETTBCCCC-----------------CTT--CC------------CTTBCCCCCCC
T ss_pred ------HHhc-----cCCCCCceEEECCcccCC-----------------Ccc--cc------------ccccccCCCce
Confidence 0000 000011135677763210 000 00 00011111245
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++++|+|.|.+ ....+.|||+||.|.|++.... +..|...|++.|.+|+++.|.+++++
T Consensus 254 ~~~v~~G~~yRlRlINa~--~~~~~~~~i~gh~~~VIa~DG~------------~v~P~~~~~l~i~pGqRydVlv~a~~ 319 (580)
T 3sqr_A 254 ELTFVEGTKYRLRLINVG--IDSHFEFAIDNHTLTVIANDLV------------PIVPYTTDTLLIGIGQRYDVIVEANA 319 (580)
T ss_dssp EEECCTTCEEEEEEEECC--SSCCEEEEETTCCEEEEEETTE------------EEEEEEESSEEECTTCEEEEEEECCS
T ss_pred eEEEcCCCEEEEEEEecc--CCceeeEEeCCceEEEEEeCCc------------cCCceEeeEEEEccceEEEEEEEeCC
Confidence 688999999999999987 2457899999999999999522 12466789999999999999999976
Q ss_pred -ceeeEEeecc
Q 013875 391 -PGVWFMHCHL 400 (434)
Q Consensus 391 -pG~w~~HCHi 400 (434)
+|.|-+.-..
T Consensus 320 ~~g~Y~i~a~~ 330 (580)
T 3sqr_A 320 AADNYWIRGNW 330 (580)
T ss_dssp CSSEEEEECCC
T ss_pred CCCeEEEEEec
Confidence 5777777554
No 64
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=98.90 E-value=4.1e-08 Score=101.03 Aligned_cols=233 Identities=9% Similarity=0.079 Sum_probs=142.7
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCC----CeeEEEEcCCeeE-EEEeCCcccCCeeeeEEEeCCCCeEEE
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALN----DELFFAIAGHNFT-VVEVDAVYTKPFTTEAILIAPGQTTNV 146 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~----~~~~~~i~g~~~~-via~DG~~~~p~~~~~~~l~~geR~dv 146 (434)
..+++||+ - .|.|+++.|+++++++.|.-.. ....|+.+|.... --..||.+- +..-.|.|||+++.
T Consensus 24 ~~~~~NG~---~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~----vtq~~I~PG~~~~Y 95 (503)
T 1hfu_A 24 AGILVNGV---H-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADG----VNQCPISPGHAFLY 95 (503)
T ss_dssp EEEEETTB---S-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEE
T ss_pred EEEEECCc---c-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcc----cccCCcCCCCeEEE
Confidence 58899998 3 5899999999999999999862 5667888886531 124788763 12234799999999
Q ss_pred EEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCc
Q 013875 147 LVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQ 226 (434)
Q Consensus 147 ~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~ 226 (434)
.++..+.+|+||....... .. .....+.|-..+..... ..+ . ...+.
T Consensus 96 ~f~~~~~~GT~wYH~H~~~----q~-~~Gl~G~liV~~~~~~~--~~~-~-~~d~~------------------------ 142 (503)
T 1hfu_A 96 KFTPAGHAGTFWYHSHFGT----QY-CDGLRGPMVIYDDNDPH--AAL-Y-DEDDE------------------------ 142 (503)
T ss_dssp EECCTTCCEEEEEEECSTT----GG-GGTCEEEEEEECTTCTT--GGG-C-SBCST------------------------
T ss_pred EEEeCCCCccEEEEecchh----hh-hCcceeeEEEcCCCCCc--ccC-C-CCCCc------------------------
Confidence 9996555699999987421 11 11233333332211100 000 0 00000
Q ss_pred ccceEEEEEeccCCCCCCccCC-CceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCc
Q 013875 227 KVDRKLFYTIGFGKDSCPTCVN-GTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGT 305 (434)
Q Consensus 227 ~~~~~~~l~~~~~~~~~~~~~g-~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~ 305 (434)
+..+.+.- ..........+ +..-...|||+.+... . .
T Consensus 143 --e~~l~l~D-w~~~~~~~~~~~~~~d~~liNG~~~~~~------------------~---------------------~ 180 (503)
T 1hfu_A 143 --NTIITLAD-WYHIPAPSIQGAAQPDATLINGKGRYVG------------------G---------------------P 180 (503)
T ss_dssp --TSEEEEEE-ECSSCGGGCC---CCSEEEETTBCCBTT------------------C---------------------C
T ss_pred --eEEEEEcc-cccCChHHhcCCCCCCEEEECcccccCC------------------C---------------------C
Confidence 00111100 00000000000 0011356777642100 0 0
Q ss_pred ccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEE
Q 013875 306 SRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIR 385 (434)
Q Consensus 306 ~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~ir 385 (434)
....+.+.++.|++++|.|.|.+ ....|.|||+||.|.|++...+. ..|...|++.|.+|+.+.|.
T Consensus 181 ~~~~~~~~v~~g~~~RlRliN~~--~~~~~~~~i~gh~~~vi~~DG~~------------~~p~~~~~l~l~pgeR~dvl 246 (503)
T 1hfu_A 181 AAELSIVNVEQGKKYRMRLISLS--CDPNWQFSIDGHELTIIEVDGEL------------TEPHTVDRLQIFTGQRYSFV 246 (503)
T ss_dssp CCCCCEEEECTTCEEEEEEEECC--SSCCEEEEETTCCEEEEEETTEE------------EEEEEESBEEECTTCEEEEE
T ss_pred CCcceEEEEcCCCEEEEEEEecC--CcccEEEEEcCceEEEEeccCcc------------ccccccCeEEEcccceEEEE
Confidence 01235589999999999999976 24579999999999999985322 23567899999999999999
Q ss_pred EEcCC-ceeeEEeecch
Q 013875 386 FRADN-PGVWFMHCHLE 401 (434)
Q Consensus 386 f~adn-pG~w~~HCHil 401 (434)
++++. +|.|.++++..
T Consensus 247 v~~~~~~g~y~i~a~~~ 263 (503)
T 1hfu_A 247 LDANQPVDNYWIRAQPN 263 (503)
T ss_dssp EECCSCSSEEEEEEEES
T ss_pred EEcCCCccceeeeeccc
Confidence 99976 69999999854
No 65
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=98.85 E-value=4.8e-08 Score=101.76 Aligned_cols=234 Identities=12% Similarity=0.102 Sum_probs=140.4
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeE-EEEeCCcccCCeeeeEEEeCC-CCeEEEEEE
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFT-VVEVDAVYTKPFTTEAILIAP-GQTTNVLVQ 149 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~-via~DG~~~~p~~~~~~~l~~-geR~dv~v~ 149 (434)
..+++||+- ..|.|+++.|+++++++.|........|+.+|.... --..||.+- +..-.|.| |+++...++
T Consensus 56 ~~~~~Ng~~---PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~----~tq~~I~P~G~~~~Y~f~ 128 (559)
T 2q9o_A 56 KVMLINGNI---MGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANG----VTECPIPPKGGQRTYRWR 128 (559)
T ss_dssp EEEEETTBS---SCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTTEEEEEEEE
T ss_pred EEEEECCcc---cCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCc----cccCccCCCCCeEEEEEE
Confidence 578999984 368999999999999999998656677888886532 124688773 12234789 999999999
Q ss_pred eCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccc
Q 013875 150 ANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVD 229 (434)
Q Consensus 150 ~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~ 229 (434)
+++ +|+||....... .. .....+.|-..+.... . .|..... --+.+.. +. . +
T Consensus 129 ~~q-~GT~wYH~H~~~----q~-~~Gl~G~liV~~~~~~---------~-~d~d~~~---l~l~Dw~---~~--~----~ 180 (559)
T 2q9o_A 129 ARQ-YGTSWYHSHFSA----QY-GNGVVGTIQINGPASL---------P-YDIDLGV---FPITDYY---YR--A----A 180 (559)
T ss_dssp CCS-CEEEEEEECSTT----GG-GGTCEEEEEEECCCSS---------C-CSEEEEE---EEEEEEC---SS--C----H
T ss_pred CCC-CEEEEEEEcccc----hh-cCCceEEEEecCCCcC---------C-CcccceE---EEEeccc---cC--C----H
Confidence 987 499999987421 11 1122333333221110 0 0000000 0000000 00 0 0
Q ss_pred eEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCCCCCcccce
Q 013875 230 RKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRAT 309 (434)
Q Consensus 230 ~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 309 (434)
.++.. ..... .....-...|||+.+.. . . .+ ...
T Consensus 181 ~~~~~--~~~~~-----~~~~~d~~liNG~~~~~-~----------------~-----------~~-----------g~~ 214 (559)
T 2q9o_A 181 DDLVH--FTQNN-----APPFSDNVLINGTAVNP-N----------------T-----------GE-----------GQY 214 (559)
T ss_dssp HHHHH--HHTTS-----CCCCBSEEEETTBCBCT-T----------------T-----------CC-----------BCC
T ss_pred HHHhh--hhhcC-----CCCccceeEECCccccC-c----------------C-----------CC-----------CCc
Confidence 00000 00000 00001134677764310 0 0 00 013
Q ss_pred eeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcC
Q 013875 310 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 389 (434)
Q Consensus 310 ~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~ad 389 (434)
..+.++.|++++|.|.|.+ ....+-|||+||.|.|++..... ..|...|++.|.+|+.+.|.++++
T Consensus 215 ~~~~v~~g~~~RlRliNa~--~~~~~~~~i~gh~~~vi~~DG~~------------~~p~~~~~l~l~pgeR~dvlv~~~ 280 (559)
T 2q9o_A 215 ANVTLTPGKRHRLRILNTS--TENHFQVSLVNHTMTVIAADMVP------------VNAMTVDSLFLAVGQRYDVVIDAS 280 (559)
T ss_dssp CEEEECTTCEEEEEEEECC--SSCCEEEEETTBCEEEEEETTEE------------EEEEEESCEEECTTCEEEEEEECC
T ss_pred eEEEEcCCCEEEEEEEecC--CCceEEEEECCCceEEEecCCcc------------cCceEeCeEEEccEEEEEEEEECC
Confidence 4588999999999999976 24578999999999999996322 235678999999999999999997
Q ss_pred C-ceeeEEeecc
Q 013875 390 N-PGVWFMHCHL 400 (434)
Q Consensus 390 n-pG~w~~HCHi 400 (434)
. +|.|-+....
T Consensus 281 ~~~g~y~i~a~~ 292 (559)
T 2q9o_A 281 RAPDNYWFNVTF 292 (559)
T ss_dssp SCSSEEEEEEEC
T ss_pred CCCCcEEEEEEe
Confidence 6 5777666654
No 66
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.84 E-value=6.7e-09 Score=88.21 Aligned_cols=98 Identities=20% Similarity=0.225 Sum_probs=70.9
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCC--ceEEE-Eec--CC---cCCCCCCCCCCCCCCCCccceeEecCCcEE
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGY--NFFVV-GTG--IG---NFDPVKYPANYNLVDPIERNTAAVPTGGWT 382 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~--~F~Vl-~~g--~g---~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v 382 (434)
.+.++.|++|+|++.|.+. +.+.|.||++.. .|.-+ ..+ .+ .|-+.. -....+++|..|.+|+..
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~~ 106 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGESG 106 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEEE
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCcee
Confidence 3889999999999999321 267999999843 12100 000 00 010000 011246899999999999
Q ss_pred EEEEEcCCceeeEEeecchhhHHccceeEEEEe
Q 013875 383 AIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 383 ~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
.+.|.++.||.|.|||++..|...||.+.|.|.
T Consensus 107 ~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 107 SVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999886
No 67
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=98.80 E-value=1.1e-07 Score=98.53 Aligned_cols=218 Identities=15% Similarity=0.101 Sum_probs=137.7
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEE-EEeCCcccCCeeeeEEEeCCCCeEEEEEEe
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTV-VEVDAVYTKPFTTEAILIAPGQTTNVLVQA 150 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~v-ia~DG~~~~p~~~~~~~l~~geR~dv~v~~ 150 (434)
..+++||+- ..|.|+++.|+++++++.|.-......|+.+|..... -..||.+- +..-.|.||++++..+++
T Consensus 23 ~~~~~Ng~~---PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~----vtq~pI~PG~~~~Y~f~~ 95 (534)
T 1zpu_A 23 PVITCNGQF---PWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPF----LTQCPIAPGSTMLYNFTV 95 (534)
T ss_dssp EEEEETTBS---SCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEEC
T ss_pred EEEEECCcc---CCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCc----cccCCcCCCCeEEEEEEe
Confidence 578999984 3689999999999999999886566678888865432 25788763 122347999999999999
Q ss_pred CCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCCcccce
Q 013875 151 NQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDR 230 (434)
Q Consensus 151 ~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~ 230 (434)
++.+|+||....... .. .....+.|-..+... | . ..++
T Consensus 96 ~~~~GT~wYH~H~~~----q~-~~Gl~G~liV~~~~~---p-~---------------------------------~~d~ 133 (534)
T 1zpu_A 96 DYNVGTYWYHSHTDG----QY-EDGMKGLFIIKDDSF---P-Y---------------------------------DYDE 133 (534)
T ss_dssp SSCCEEEEEECCSSS----GG-GGTCEEEEEEECTTC---C-S---------------------------------CCSE
T ss_pred CccceeEEEEEcCcc----cc-cCcceeeEEeCCCCC---C-C---------------------------------CCcc
Confidence 856699999987421 11 112233333322110 0 0 0011
Q ss_pred EEEEEeccCCCC-------------CCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCC
Q 013875 231 KLFYTIGFGKDS-------------CPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGA 297 (434)
Q Consensus 231 ~~~l~~~~~~~~-------------~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~ 297 (434)
++.+.++-.... .+...++..-...|||+
T Consensus 134 e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~-------------------------------------- 175 (534)
T 1zpu_A 134 ELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNT-------------------------------------- 175 (534)
T ss_dssp EEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTB--------------------------------------
T ss_pred eEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCC--------------------------------------
Confidence 121111000000 00000000001233332
Q ss_pred CCCCCCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEec
Q 013875 298 PLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVP 377 (434)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp 377 (434)
....+.++.|++++|.|.|.+ ....+-|||+||.|.|++...+. ..|...|++.|.
T Consensus 176 ----------~~~~~~v~~g~~~RlRliNa~--~~~~~~~~i~gh~~~vi~~DG~~------------~~P~~~~~l~l~ 231 (534)
T 1zpu_A 176 ----------MNLTWEVQPDTTYLLRIVNVG--GFVSQYFWIEDHEMTVVEIDGIT------------TEKNVTDMLYIT 231 (534)
T ss_dssp ----------SSCEEECCSSCEEEEEEEECC--SSCCEEEEETTBCEEEEEETTEE------------EEEEEESCEEEC
T ss_pred ----------CceEEEEECCCEEEEEEEecc--CCceEEEEEcCCeeEEEeccCcC------------ccccEeceEEEC
Confidence 123588999999999999976 34568899999999999996332 235567999999
Q ss_pred CCcEEEEEEEcCC--ceeeEEeecc
Q 013875 378 TGGWTAIRFRADN--PGVWFMHCHL 400 (434)
Q Consensus 378 ~~g~v~irf~adn--pG~w~~HCHi 400 (434)
+|+++.|.+++++ .|.|.++...
T Consensus 232 ~gqR~dvlv~~~~~~~~~y~i~~~~ 256 (534)
T 1zpu_A 232 VAQRYTVLVHTKNDTDKNFAIMQKF 256 (534)
T ss_dssp TTCEEEEEEECCSCSSCCEEEEEEE
T ss_pred ccceEEEEEEcCCCCCCcEEEEEec
Confidence 9999999999965 3566666653
No 68
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.71 E-value=9e-09 Score=81.69 Aligned_cols=79 Identities=16% Similarity=0.277 Sum_probs=59.0
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+|+ |.+ ...|.+|+++..+- +... .....|+..+.||+...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~~~---------------~~~~~~~~~~~pG~~~~~tf--~~ 75 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--ADTA---------------AKLSHKGLLFAAGESFTSTF--TE 75 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HHHH---------------HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--cccc---------------ccccccccccCCCCEEEEEc--CC
Confidence 4789999999986 643 46899999864221 0000 00115788899999887765 89
Q ss_pred ceeeEEeecchhhHHccceeEEEEe
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
||.|.|||+ .|.++||.+.+.|+
T Consensus 76 ~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 76 PGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999874
No 69
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.70 E-value=1.8e-08 Score=79.95 Aligned_cols=80 Identities=16% Similarity=0.238 Sum_probs=59.8
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+| .|.+ ...|.+|+|+..+ ...++. ..+++|+..+.||+...+.| +.
T Consensus 19 ~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~------p~~~~~----------~~~~~~~~~~~pG~~~~~tf--~~ 75 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNA---GFPHNIVFDEDAI------PSGVNA----------DAISRDDYLNAPGETYSVKL--TA 75 (98)
T ss_dssp EEEECTTCEEEE--EECS---SCCEEEEECGGGS------CTTCCH----------HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCC------CCcccc----------ccccccceecCCCCEEEEEe--CC
Confidence 478999999988 5754 5689999987421 000000 01246889999999887755 69
Q ss_pred ceeeEEeecchhhHHccceeEEEEe
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
||.|.|||| .|.++||.+.+.|+
T Consensus 76 ~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 76 AGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999873
No 70
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.64 E-value=6.4e-08 Score=75.46 Aligned_cols=72 Identities=21% Similarity=0.390 Sum_probs=57.0
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+|+ |.+ ...|.+|+++. +. ...++..+.||+...+.| +.
T Consensus 20 ~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~---------~~---------------~~~~~~~~~~g~~~~~~f--~~ 68 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNK---LAPHNVVVEGQ---------PE---------------LSHKDLAFSPGETFEATF--SE 68 (91)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEETTC---------GG---------------GCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCC---------Cc---------------cCcccceeCCCCEEEEEe--CC
Confidence 3789999999886 543 46899998872 00 125678889998777765 89
Q ss_pred ceeeEEeecchhhHHccceeEEEEe
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
||.|.|||+ .|.+.||.+.+.|+
T Consensus 69 ~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 69 PGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEeC--CCccCCCEEEEEEC
Confidence 999999999 89999999999874
No 71
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.59 E-value=2.7e-08 Score=78.77 Aligned_cols=78 Identities=22% Similarity=0.396 Sum_probs=58.4
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+|+ |.+ ...|.+++++..+ ..+. .....++..+.||+...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~-----~~~~-------------~~~~~~~~~~~~g~~~~~tf--~~ 74 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK---VGPHNVIFDKVPA-----GESA-------------PALSNTKLAIAPGSFYSVTL--GT 74 (97)
T ss_dssp EEEECTTCEEEEE--ECS---SCCCCBEEEECCT-----TSCH-------------HHHCBCCCCCSCSCCEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCCCC-----cccc-------------ccccccceecCCCCEEEEEe--CC
Confidence 3789999999886 643 4689999886544 0000 00114677888888877765 89
Q ss_pred ceeeEEeecchhhHHccceeEEEEe
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
||.|.|||+ .|.++||.+.+.|+
T Consensus 75 ~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 75 PGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSEEEEECS--STTTTTCEEEEEEC
T ss_pred CeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999 89999999999874
No 72
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=98.51 E-value=2.7e-07 Score=94.08 Aligned_cols=88 Identities=17% Similarity=0.192 Sum_probs=73.4
Q ss_pred eEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCC---eeeeEEEeCCCCeEEEEEE
Q 013875 73 TYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKP---FTTEAILIAPGQTTNVLVQ 149 (434)
Q Consensus 73 ~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p---~~~~~~~l~~geR~dv~v~ 149 (434)
.++|||+.+....+.++++.|+++||+|+|.+....+.|||+|+.|+|++.||.+..+ .+.|++.|. ||++.|+++
T Consensus 379 ~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~ 457 (488)
T 3od3_A 379 ANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVK 457 (488)
T ss_dssp CEEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEEC
T ss_pred eeeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEE
Confidence 4799999763345668999999999999999876678899999999999999988743 467999999 999999999
Q ss_pred eCCC---CCceEEEE
Q 013875 150 ANQK---PGRYFMAA 161 (434)
Q Consensus 150 ~~~~---~g~~~l~a 161 (434)
++.. +|.|.+.-
T Consensus 458 f~~~~~~~G~~m~HC 472 (488)
T 3od3_A 458 FNHDAPKEHAYMAHC 472 (488)
T ss_dssp BCSCCCGGGCEEEEE
T ss_pred eccCCCCCCCEEEeC
Confidence 9764 35665553
No 73
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.48 E-value=4.2e-07 Score=73.83 Aligned_cols=74 Identities=18% Similarity=0.307 Sum_probs=56.9
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|+.|+|++.|.+ ...|-|++.. . .-+..+.||+...+.|.++.
T Consensus 39 ~i~v~~G~~V~~~~~n~d---~~~H~~~i~~-------~---------------------~~~~~i~pG~~~~~~f~~~~ 87 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKS---PISEGFSIDA-------F---------------------GVQEVIKAGETKTISFTADK 87 (112)
T ss_dssp EEEEETTCEEEEEEEECS---SSCEEEEEGG-------G---------------------TEEEEECTTCEEEEEEECCS
T ss_pred EEEEeCCCEEEEEEEECC---CCeEEEEEcC-------C---------------------CceeEeCCCCEEEEEEECCC
Confidence 488999999999999964 2333333221 1 11567899999999999999
Q ss_pred ceeeEEeecchhhHHccceeEEEEec
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVED 416 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~~ 416 (434)
||.|.||||+.-|... |.+.+.|++
T Consensus 88 ~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 88 AGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp CEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CEEEEEECCCCCchHH-CEEEEEEeC
Confidence 9999999999877544 999998853
No 74
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=98.47 E-value=7.1e-07 Score=90.95 Aligned_cols=88 Identities=16% Similarity=0.265 Sum_probs=74.3
Q ss_pred eEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEe--CCccc---CCeeeeEEEeCCCCeEEEE
Q 013875 73 TYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEV--DAVYT---KPFTTEAILIAPGQTTNVL 147 (434)
Q Consensus 73 ~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~--DG~~~---~p~~~~~~~l~~geR~dv~ 147 (434)
.++|||+.+....+.++++.|++++|+|+|.+ ...+.|+|+||.|+|++. +|... ++.+.|++.|.|||++.|.
T Consensus 372 ~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~-~~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~ 450 (481)
T 3zx1_A 372 MFLINRKSYDLKRIDLSSKLGVVEDWIVINKS-HMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLR 450 (481)
T ss_dssp TEEETTBCCCTTCCCEEEETTCCEEEEEEECS-SSCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEE
T ss_pred eeEECCEeCCCCCceEEeCCCCEEEEEEEcCC-CCceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEE
Confidence 38999997632346799999999999999976 457779999999999999 99876 4677899999999999999
Q ss_pred EEeCCCCCceEEEEe
Q 013875 148 VQANQKPGRYFMAAR 162 (434)
Q Consensus 148 v~~~~~~g~~~l~a~ 162 (434)
++++.+ |.|.+.-.
T Consensus 451 ~~~d~p-G~w~~HCH 464 (481)
T 3zx1_A 451 MKQDFK-GLRMYHCH 464 (481)
T ss_dssp ECCCSC-EEEEEEES
T ss_pred EEcCCC-eeEEEEcC
Confidence 999764 88876643
No 75
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.47 E-value=4.9e-07 Score=71.91 Aligned_cols=71 Identities=20% Similarity=0.382 Sum_probs=57.4
Q ss_pred eEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCCc
Q 013875 312 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNP 391 (434)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnp 391 (434)
+.++.|++|+|++.|.+ ...|.|.+.+..+ ...+.||....+.|.++.|
T Consensus 30 i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~~~ 78 (100)
T 4hci_A 30 ITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPKSA 78 (100)
T ss_dssp EEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCCSC
T ss_pred EEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCCcceeEEEecccC
Confidence 89999999999999965 4556665543321 2346788889999999999
Q ss_pred eeeEEeecchhhHHccceeEEEEe
Q 013875 392 GVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 392 G~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
|.|.|+|. .|...||.+.+.|+
T Consensus 79 G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 79 GTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp EEEEEECT--TTGGGTCEEEEEEC
T ss_pred ceEEEECc--cccCCCCEEEEEEC
Confidence 99999997 59999999999884
No 76
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.46 E-value=4.8e-07 Score=71.70 Aligned_cols=82 Identities=16% Similarity=0.167 Sum_probs=59.0
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+| .|.+ ...|.+|+++..|- . | ++. . .....+|++.+.+|+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~--g-~~~------~--~~~~~~~~~~~~~G~~~~~~f--~~ 76 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---A--G-VDV------T--KISMPEEDLLNAPGEEYSVTL--TE 76 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSSC---T--T-CCH------H--HHSCCTTCCBCSTTCEEEEEE--CS
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCCc---c--c-ccc------c--cccccccceeeCCCCEEEEEe--CC
Confidence 478999999888 5754 56899999975430 0 0 000 0 001225677889998877765 69
Q ss_pred ceeeEEeecchhhHHccceeEEEEe
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
||.|.|||+ .|.++||.+.|.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 77 KGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CcEEEEEcC--CccccCCEEEEEEC
Confidence 999999999 79999999999873
No 77
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.40 E-value=6.4e-07 Score=71.38 Aligned_cols=85 Identities=12% Similarity=0.130 Sum_probs=57.5
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+|+ |.+ ...|.++++.- +.++.. .........+..+++.+.||+...+.| +.
T Consensus 18 ~i~v~~G~tV~~~--n~~---~~~H~~~~~~~---------~~~~~~--~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~ 79 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVG---ETGHNIVFDIP---------AGAPGT--VASELKAASMDENDLLSEDEPSFKAKV--ST 79 (102)
T ss_dssp EEEECTTCCEEEE--ECS---SSCBCCEECCC---------TTCCHH--HHHHHHHTSCCTTCCBBTTBCEEEECC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCc---------cccccc--ccchhhcccccccceecCCCCEEEEEe--CC
Confidence 4789999999986 653 46899998721 000000 000000001224677888998877765 89
Q ss_pred ceeeEEeecchhhHHccceeEEEEe
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
||.|.|||+ .|.++||.+.|.|+
T Consensus 80 ~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 80 PGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp CEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CeEEEEEeC--CCcccCCeEEEEEC
Confidence 999999999 99999999999874
No 78
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=98.27 E-value=3e-06 Score=88.68 Aligned_cols=88 Identities=18% Similarity=0.169 Sum_probs=72.0
Q ss_pred eEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCc------------------------cc
Q 013875 73 TYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAV------------------------YT 128 (434)
Q Consensus 73 ~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~------------------------~~ 128 (434)
.+.|||+.+ ...+.++++.|++++|+|+|.+. ..+.|+|+||.|+|++.+|. ++
T Consensus 460 ~~~iNG~~~-~~~~~~~v~~G~~v~w~l~N~~~-~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 537 (612)
T 2g23_A 460 TYRRTAATF-NDGLGFTIGEGTHEQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEECST-TSCCCEEEETTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred EEEECCccC-CCCCceEecCCCEEEEEEEeCCC-CCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCC
Confidence 578999976 34678999999999999999984 56779999999999987542 12
Q ss_pred ---CCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 129 ---KPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 129 ---~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
++.+.|++.|.|||++.|.++++..+|.|.+.-.
T Consensus 538 ~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCH 574 (612)
T 2g23_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCH 574 (612)
T ss_dssp CTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEES
T ss_pred CcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeC
Confidence 2346799999999999999999955698877654
No 79
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.16 E-value=4.2e-06 Score=71.94 Aligned_cols=85 Identities=16% Similarity=0.330 Sum_probs=60.3
Q ss_pred eeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccce-------eEecCCc--
Q 013875 310 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNT-------AAVPTGG-- 380 (434)
Q Consensus 310 ~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDT-------v~vp~~g-- 380 (434)
+.+.++.|++|.+++.|.+ ....|-+-++. .+. .+.. .|...+. ..|.||+
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~-------~~~-~~~~----------~~~~~~~~~~~~~~~~i~PG~sg 120 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITK-------KGP-PYAV----------MPVIDPIVAGTGFSPVPKDGKFG 120 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEES-------CCS-CCCS----------SCCCCSEEEEBCCCCCCBTTBEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEee-------cCc-chhc----------cccccccccccccccccCCCCce
Confidence 4589999999999999963 13455554442 111 1100 0001111 2567888
Q ss_pred EEEEEEEcCCceeeEEeecchhhHHccceeEEEEe
Q 013875 381 WTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 381 ~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
...+.|++ .||.|.||||+.-|...||-+.+.|+
T Consensus 121 t~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 121 YTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 89999999 99999999999999999999999873
No 80
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.15 E-value=2.9e-06 Score=67.08 Aligned_cols=82 Identities=16% Similarity=0.182 Sum_probs=57.5
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+| .|.+ ...|.++++...+- .+ .+. . .....++.+.+.+|+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p-----~~-~~~------~--~~~~~~~~~~~~~G~~~~~tf--~~ 76 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP-----SG-VDA------S--KISMSEEDLLNAKGETFEVAL--SN 76 (99)
T ss_dssp EEEECTTCEEEE--EECS---SCCBCCEECTTSSC-----TT-CCH------H--HHCCCTTCCBCSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCCc-----cc-ccc------c--ccccccCccccCCCCEEEEEE--CC
Confidence 488999999988 5654 56899998864320 00 000 0 001124557788998777755 69
Q ss_pred ceeeEEeecchhhHHccceeEEEEe
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
||.|.|||+ -|.++||.+.+.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 77 KGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CceEEEEcC--CCcccCCEEEEEEC
Confidence 999999999 79999999999873
No 81
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=98.11 E-value=6.1e-06 Score=83.52 Aligned_cols=87 Identities=18% Similarity=0.229 Sum_probs=70.4
Q ss_pred eeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcC
Q 013875 310 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 389 (434)
Q Consensus 310 ~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~ad 389 (434)
++++++.|+++++.+.|.- ...+.+|+||...- ....| .|. ..|+||+..+.+|+++
T Consensus 38 P~i~~~~Gd~v~v~~~N~l---~~~tsiHwHG~~~~--~~~DG--------------~~~----~~i~PG~~~~Y~f~~~ 94 (448)
T 3aw5_A 38 PTIILRRGQRVDMTLKNKL---TEPTIVHWHGFDVN--WHNDA--------------HPS----FAITPGESYNYSFDVV 94 (448)
T ss_dssp CEEEEETTCEEEEEEEECS---SSCBCEEEETCCCC--HHHHT--------------CGG----GCBCTTCEEEEEEECC
T ss_pred ceEEEeCCCEEEEEEEECC---CCceeEEeCCccCC--CccCC--------------CCC----ccCCCCCEEEEEEEcC
Confidence 5699999999999999964 57899999998531 00011 011 4678999999999997
Q ss_pred -CceeeEEeec----chhhHHccceeEEEEecCCC
Q 013875 390 -NPGVWFMHCH----LELHTGWGLKTAFAVEDGPG 419 (434)
Q Consensus 390 -npG~w~~HCH----il~H~d~GM~~~~~v~~~~~ 419 (434)
.+|.|.|||| ...+...||.+.+.|+++++
T Consensus 95 ~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~ 129 (448)
T 3aw5_A 95 NRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGS 129 (448)
T ss_dssp SCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTT
T ss_pred CCCCceEeccCCCCchHHHHhccceEEEEEeCCcc
Confidence 7999999999 88999999999999988654
No 82
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=98.05 E-value=1e-05 Score=83.60 Aligned_cols=88 Identities=13% Similarity=0.158 Sum_probs=68.4
Q ss_pred eeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEc
Q 013875 309 TRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA 388 (434)
Q Consensus 309 ~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~a 388 (434)
.+++.++.|+.+++.+.|.. ...+.+|+||... . +..+.. | + -.|+||+..+.+|.+
T Consensus 68 GPtI~~~~Gd~v~v~v~N~l---~~~tsiHwHGl~~----~--~~~DG~----------~---~-~~i~PG~~~~Y~f~~ 124 (534)
T 3abg_A 68 GPTFQVPRGVETVVRFINNA---EAPNSVHLHGSFS----R--AAFDGW----------A---E-DITEPGSFKDYYYPN 124 (534)
T ss_dssp EEEEEEETTCCEEEEEEECS---SSCBCEEEETCCC----C--TTTTTC----------S---S-SCBSSCSCCCEEECC
T ss_pred CceEEEeCCcEEEEEEEECC---CCCceEEECCCcC----C--CCCCCC----------C---C-CCCCCCCeEEEEEec
Confidence 56799999999999999964 5789999999741 1 111211 0 1 137899999999999
Q ss_pred CC-ceeeEEeecch----hhHHccceeEEEEecCCC
Q 013875 389 DN-PGVWFMHCHLE----LHTGWGLKTAFAVEDGPG 419 (434)
Q Consensus 389 dn-pG~w~~HCHil----~H~d~GM~~~~~v~~~~~ 419 (434)
+. .|.+.||||.. .|...||.+.+.|+++++
T Consensus 125 ~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~ 160 (534)
T 3abg_A 125 RQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAE 160 (534)
T ss_dssp CSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTT
T ss_pred CCcceeEEEecCccccchhhhhhcceEEEEEECCcc
Confidence 77 58999999995 478899999999988654
No 83
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.02 E-value=1.6e-05 Score=82.22 Aligned_cols=78 Identities=18% Similarity=0.359 Sum_probs=62.1
Q ss_pred eeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcC
Q 013875 310 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 389 (434)
Q Consensus 310 ~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~ad 389 (434)
+.+.++.|+.|+|++.|.+...+..|.|+++++.+. ..+.||+...+.|+++
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta~ 564 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVAA 564 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEECC
Confidence 457899999999999995422245788888765321 4577889999999999
Q ss_pred CceeeEEeec---chhhHHccceeEEEEecC
Q 013875 390 NPGVWFMHCH---LELHTGWGLKTAFAVEDG 417 (434)
Q Consensus 390 npG~w~~HCH---il~H~d~GM~~~~~v~~~ 417 (434)
.||.|.|||| ...|. ||.+.+.|++.
T Consensus 565 ~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 565 NPGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp SCEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CCEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 9999999999 45674 99999999764
No 84
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.98 E-value=2e-05 Score=63.08 Aligned_cols=72 Identities=15% Similarity=0.276 Sum_probs=50.6
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+|+ |.+ ...|.+|+++-. .|. +.+ ++-.+.+|+...+.| +.
T Consensus 34 ~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~~-~~~~~~pG~~~~~tf--~~ 84 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE--------------AAL-KGPMMKKEQAYSLTF--TE 84 (105)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SCE-ECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc--------------ccc-cccccCCCCEEEEEe--CC
Confidence 4889999999885 754 568999887521 111 001 222367887666555 89
Q ss_pred ceeeEEeecchhhHHccceeEEEEe
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
||.|.|||++ |. ||.+.+.|+
T Consensus 85 ~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 85 AGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999997 65 999999873
No 85
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=97.91 E-value=2.8e-05 Score=80.06 Aligned_cols=88 Identities=16% Similarity=0.201 Sum_probs=70.4
Q ss_pred eEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCc---------------c-c-----CCe
Q 013875 73 TYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAV---------------Y-T-----KPF 131 (434)
Q Consensus 73 ~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~---------------~-~-----~p~ 131 (434)
.++|||+.+ .....+.++.|++++|+|+|.+. ..+.|+||||.|+|++.+|. + . +|.
T Consensus 385 ~~~iNg~~~-~~~~~~~~~~g~~~~w~l~N~~~-~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
T 2wsd_A 385 VLLLNNKRW-HDPVTETPKVGTTEIWSIINPTR-GTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKG 462 (513)
T ss_dssp EEEETTBCT-TSCCCBCCBTTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSS
T ss_pred eEeECCccC-CCcccEecCCCCEEEEEEEcCCC-CCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccC
Confidence 567999976 23345789999999999999875 46779999999999998762 1 1 235
Q ss_pred eeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 132 TTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 132 ~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
+.|++.|.||+++.+++++...+|.|.+.-.
T Consensus 463 ~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCH 493 (513)
T 2wsd_A 463 WKDTIQAHAGEVLRIAATFGPYSGRYVWHCH 493 (513)
T ss_dssp CBSEEEECTTEEEEEEEECCSCCEEEEEEES
T ss_pred cccEEEeCCCCEEEEEEEecCCCCCEEEEcC
Confidence 7899999999999999999655698877654
No 86
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=97.54 E-value=0.00034 Score=73.42 Aligned_cols=89 Identities=17% Similarity=0.166 Sum_probs=69.2
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCccc-----------------------
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT----------------------- 128 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~----------------------- 128 (434)
..+.+||+.. .....+.++.|++++|.|+|.+.. .+.||||||.|+||+.+|...
T Consensus 459 ~~~~~n~~~~-~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (612)
T 3gyr_A 459 KTYRRTARTF-NDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVP 536 (612)
T ss_dssp EEEEEEECST-TSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECC
T ss_pred ccccccCccC-CCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccC
Confidence 3567788765 345678899999999999999865 567999999999999876422
Q ss_pred ----CCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 129 ----KPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 129 ----~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
++.+-|++.|.+|+.+.|.+++...+|.|.+.=.
T Consensus 537 ~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCH 574 (612)
T 3gyr_A 537 LAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCH 574 (612)
T ss_dssp CCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEES
T ss_pred cccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCC
Confidence 2234699999999999999996555688766643
No 87
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=97.34 E-value=0.00062 Score=57.12 Aligned_cols=79 Identities=25% Similarity=0.360 Sum_probs=55.4
Q ss_pred eEEE----cCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCC-----------------ccc---
Q 013875 73 TYII----NSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDA-----------------VYT--- 128 (434)
Q Consensus 73 ~~lv----NG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG-----------------~~~--- 128 (434)
.+.| |+..+ .+..++|++|++++|++.|.+... .|.|.+...+. .++
T Consensus 20 ~V~v~~~~~~~~F--~p~~i~v~~G~~V~~~~~N~~~~~-------~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~ 90 (139)
T 2aan_A 20 TIEIGSKGEELAF--DKTELTVSAGQTVTIRFKNNSAVQ-------QHNWILVKGGEAEAANIANAGLSAGPAANYLPAD 90 (139)
T ss_dssp EEEEEBCTTSSSB--SCSEEEECTTCEEEEEEECCCSSC-------CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC
T ss_pred EEEEEecCCccEE--cCCeEEECCCCEEEEEEEeCCCCC-------CeeEEEeccccccchhhhhhhhcccccccccCcc
Confidence 5666 55444 467899999999999999987542 55666554321 122
Q ss_pred -CCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEE
Q 013875 129 -KPFTTEAILIAPGQTTNVLVQANQKPGRYFMAA 161 (434)
Q Consensus 129 -~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a 161 (434)
.....++..|.|||++++.+++++ +|.|++.=
T Consensus 91 ~~~~~~~t~~l~pGet~~v~f~~~~-pG~y~f~C 123 (139)
T 2aan_A 91 KSNIIAESPLANGNETVEVTFTAPA-AGTYLYIC 123 (139)
T ss_dssp CTTEEEECCCBCTTCEEEEEEECCS-SEEEEEEC
T ss_pred cccccccccccCCCCEEEEEEECCC-CeEEEEEc
Confidence 112346677999999999999976 49998774
No 88
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.30 E-value=0.00081 Score=52.68 Aligned_cols=80 Identities=21% Similarity=0.320 Sum_probs=52.9
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+|+ |.+ ...|-+.+... .+.. ..+. ..+..+...+.+|+...+.| +.
T Consensus 19 ~i~v~~GdtV~~~--n~~---~~~H~v~~~~~----------~~p~-----g~~~-~~~~~~~~~~~~g~~~~~tf--~~ 75 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNA---GFPHNIVFDED----------AVPA-----GVDA-DAISYDDYLNSKGETVVRKL--ST 75 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECTT----------SSCT-----TCCH-HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEeCC----------CCcc-----cccc-ccccccccccCCCCEEEEEc--CC
Confidence 4889999999986 643 35676554431 1100 0000 00113446788888777765 89
Q ss_pred ceeeEEeecchhhHHccceeEEEEe
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
||.|.|+|-+ |..+||.+.+.|+
T Consensus 76 ~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 76 PGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp CEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CEEEEEEchh--hccCCCEEEEEEC
Confidence 9999999986 9999999999874
No 89
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.28 E-value=0.00046 Score=56.99 Aligned_cols=75 Identities=21% Similarity=0.295 Sum_probs=49.4
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+|++.| ..|-+..+.. .+ |. -...+.+.||+... ++++.
T Consensus 24 ~i~V~~GDtVtf~n~~------~~H~v~~~~~----------~~-P~------------g~~~f~s~pGet~s--~TF~~ 72 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKD------KGHNSALMKG----------GA-PE------------GAETWKGKINEEIT--VTLSK 72 (127)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTT----------CS-CT------------TCCCCBCCTTCCCE--EECCS
T ss_pred EEEECCCCEEEEEECC------CCceEEEccC----------cC-CC------------CccceecCCCCEEE--EEeCC
Confidence 3889999999997654 1354443311 01 00 00112234666544 44589
Q ss_pred ceeeEEeecchhhHHccceeEEEEecCC
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVEDGP 418 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~~~~ 418 (434)
||.|.|||- .|...||.+.+.|.++.
T Consensus 73 pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 73 PGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 999999999 69999999999998754
No 90
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.27 E-value=0.00087 Score=54.99 Aligned_cols=74 Identities=18% Similarity=0.235 Sum_probs=50.3
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+|++.| ..|-+.++.. .+... -+.+.+.||+...+.| +.
T Consensus 22 ~i~V~~GdtV~f~~~~------~~H~v~~~~~----------~~P~g-------------~~~f~~~pg~t~s~TF--~~ 70 (123)
T 3erx_A 22 FVRAEPGDVINFVPTD------KSHNVEAIKE----------ILPEG-------------VESFKSKINESYTLTV--TE 70 (123)
T ss_dssp EEEECTTEEEEEEESS------TTCCCEECTT----------SSCTT-------------CCCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECC------CCceEEEcCC----------cCCCC-------------ccceecCCCCEEEEEe--CC
Confidence 3889999999998765 1355544321 11000 0112235677555555 89
Q ss_pred ceeeEEeecchhhHHccceeEEEEecC
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVEDG 417 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~~~ 417 (434)
||.|.|+|- .|...||.+.+.|.+.
T Consensus 71 pG~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 71 PGLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEESSS
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECCC
Confidence 999999999 8999999999999863
No 91
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.21 E-value=0.0011 Score=52.86 Aligned_cols=72 Identities=19% Similarity=0.214 Sum_probs=49.1
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+|+ |.+ ...|-+++.... .|. ...++-.+.+|+...+.| +.
T Consensus 35 ~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~-------~~~---------------~~~~s~~l~~g~~~~~tf--~~ 85 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE---------------DAFRGEMMTKDQAYAITF--NE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS---------------SCEECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCcEEEEEeCCC-------CCc---------------ccccccccCCCCEEEEEe--CC
Confidence 3889999999987 654 456766654321 000 011333467787776665 89
Q ss_pred ceeeEEeecchhhHHccceeEEEEe
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
||.|.|+|-+ |. ||.+.+.|+
T Consensus 86 ~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 86 AGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999987 76 999999873
No 92
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.16 E-value=0.00088 Score=54.98 Aligned_cols=74 Identities=16% Similarity=0.219 Sum_probs=50.4
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+|+..+ ..|-+..+.. .+.. -.+.+.+.+|+...+.| +.
T Consensus 23 ~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~-------------g~~~~~~~pg~t~s~TF--~~ 71 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPE-------------GVAPVKGGFSKEVVFNA--EK 71 (124)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTT----------TSCT-------------TSCCCBCCTTCCEEEEC--CS
T ss_pred EEEECCCCEEEEEECC------CCccEEEeCC----------cCCC-------------CccccccCCCCEEEEEe--CC
Confidence 3889999999997432 3666665421 1110 01122345676555544 89
Q ss_pred ceeeEEeecchhhHHccceeEEEEecC
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVEDG 417 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~~~ 417 (434)
||.|.|||- .|..+||.+.+.|.++
T Consensus 72 ~G~y~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 72 EGLYVLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp SEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred CeEEEEEcC--CCCcCCCEEEEEECCC
Confidence 999999995 8999999999999764
No 93
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.07 E-value=0.0016 Score=54.08 Aligned_cols=72 Identities=19% Similarity=0.214 Sum_probs=49.9
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|+|+ |.+ ...|-+++.... .|. ..-++-.+.+|+...+.| +.
T Consensus 61 ~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g~---------------~~~~s~~l~pG~t~~~tF--~~ 111 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE---------------DAFRGEMMTKDQAYAITF--NE 111 (132)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS---------------SCEECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CCc---------------ccccccccCCCCEEEEEc--CC
Confidence 4889999999986 654 457777664311 000 011333567888777666 89
Q ss_pred ceeeEEeecchhhHHccceeEEEEe
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
||.|.|||-+ |. ||.+.+.|+
T Consensus 112 ~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 112 AGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--Cc--CCEEEEEEC
Confidence 9999999987 76 999999874
No 94
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.71 E-value=0.0073 Score=48.33 Aligned_cols=60 Identities=18% Similarity=0.255 Sum_probs=46.0
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
++.++|++|++++|++.|.... .+.+.+.+. |. ...+.|||++++.++++++ |.|++.-.
T Consensus 37 p~~i~v~~G~~V~~~~~n~d~~-~H~~~i~~~--------~~--------~~~i~pG~~~~~~f~~~~~-G~y~~~C~ 96 (112)
T 1iby_A 37 PETLVVKKGDAVKVVVENKSPI-SEGFSIDAF--------GV--------QEVIKAGETKTISFTADKA-GAFTIWCQ 96 (112)
T ss_dssp SCEEEEETTCEEEEEEEECSSS-CEEEEEGGG--------TE--------EEEECTTCEEEEEEECCSC-EEEEEBCS
T ss_pred CCEEEEeCCCEEEEEEEECCCC-eEEEEEcCC--------Cc--------eeEeCCCCEEEEEEECCCC-EEEEEECC
Confidence 5689999999999999999853 344444432 21 5679999999999998764 99988754
No 95
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.57 E-value=0.0073 Score=49.40 Aligned_cols=37 Identities=22% Similarity=0.419 Sum_probs=30.0
Q ss_pred cCCcEEEEEEEcCCceeeEEeecchhhHHccceeEEEEecC
Q 013875 377 PTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDG 417 (434)
Q Consensus 377 p~~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~~~ 417 (434)
.+|+.. .+.++.||.|.|+|- .|..+||.+.+.|.+.
T Consensus 59 ~pG~t~--~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 59 KINENY--VLTVTQPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp CTTCCE--EEECCSCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCCCEE--EEEeCCCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 466654 455589999999997 5999999999999763
No 96
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.56 E-value=0.0077 Score=61.43 Aligned_cols=79 Identities=16% Similarity=0.256 Sum_probs=60.5
Q ss_pred eeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcC
Q 013875 310 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 389 (434)
Q Consensus 310 ~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~ad 389 (434)
..+.++.|+.|+|++.|.+...+..|.|.+.+.... +.+.||..-.+.|+++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------------------~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------------------MEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------------------eeeCCCCeEEEEEEcC
Confidence 347899999999999996322256777766554321 2466788899999999
Q ss_pred CceeeEEeecchhhH-HccceeEEEEec
Q 013875 390 NPGVWFMHCHLELHT-GWGLKTAFAVED 416 (434)
Q Consensus 390 npG~w~~HCHil~H~-d~GM~~~~~v~~ 416 (434)
.||.|.++|...-|. +.+|.+.+.|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999976664 478999999874
No 97
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.49 E-value=0.0064 Score=49.75 Aligned_cols=38 Identities=24% Similarity=0.354 Sum_probs=30.5
Q ss_pred ecCCcEEEEEEEcCCceeeEEeecchhhHHccceeEEEEecC
Q 013875 376 VPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDG 417 (434)
Q Consensus 376 vp~~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~~~ 417 (434)
+.+|+... +.++.||.|.|+|- .|..+||.+.+.|.+.
T Consensus 58 ~~pG~t~~--~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAV--VKFDKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEE--EECCSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred cCCCCEEE--EEeCCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 34677544 45589999999998 5999999999999864
No 98
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=96.39 E-value=0.0029 Score=49.90 Aligned_cols=73 Identities=12% Similarity=0.229 Sum_probs=48.9
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
++.++|++|++++| +|.+. ..+.+++++..+.. .+|..-.....+...|.|||++++.++++..+|.|++.-.
T Consensus 18 p~~i~v~~Gd~V~~--~N~~~-~~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 18 PANVTVHPGDTVKW--VNNKL-PPHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SSEEEECTTEEEEE--EECSS-CCEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred CCEEEEcCCCEEEE--EECCC-CCCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 46899999998865 58764 45678887764322 1121111122467889999999998877444699998754
No 99
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.26 E-value=0.012 Score=50.74 Aligned_cols=89 Identities=9% Similarity=0.144 Sum_probs=60.6
Q ss_pred eEe-ecCCeEEEEEEeCCCC--CCCCCCccccCCceEEEEecC-----------C--cCCCCCCCCCCCCCCCCccceeE
Q 013875 312 SKI-AFNSTIELVLQDTNLL--TVESHPFHLHGYNFFVVGTGI-----------G--NFDPVKYPANYNLVDPIERNTAA 375 (434)
Q Consensus 312 ~~~-~~g~~v~~vl~N~~~~--~~~~HP~HlHG~~F~Vl~~g~-----------g--~~~~~~~~~~~n~~~p~~rDTv~ 375 (434)
+.+ +.|+.|.|+|.|.+.. .++.|- |-+...+. + .|-+.. ..-....|..
T Consensus 60 itV~kaG~~Vtv~~~N~g~~p~~~m~Hn-------~vi~~~~~~~~v~~~~m~~~~~~~v~~~-------d~~vl~~t~~ 125 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQPKASMGHN-------LVIAKAEDMDGVFKDGVGAADTDYVKPD-------DARVVAHTKL 125 (167)
T ss_dssp EEEETTCSSEEEEEEECSCSCHHHHCBC-------CEEEEGGGHHHHHHHHGGGGGGTTSCTT-------CTTEEEECCC
T ss_pred EEEecCCCEEEEEEEECCCCccccccce-------EEeccCcchhhhHHHhhhcccccccccc-------ccchhcccee
Confidence 788 8999999999997521 012343 43333220 0 110000 0012345667
Q ss_pred ecCCcEEEEEEEcC--CceeeEEeecchhhHHccceeEEEEe
Q 013875 376 VPTGGWTAIRFRAD--NPGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 376 vp~~g~v~irf~ad--npG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
|.||+...|.|.++ .||.|-|+|-+--|.. ||-+.|.|.
T Consensus 126 l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 126 IGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp BCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred eCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 89999999999998 8999999999988988 999999885
No 100
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.93 E-value=0.029 Score=46.55 Aligned_cols=70 Identities=21% Similarity=0.365 Sum_probs=51.6
Q ss_pred eEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCCc
Q 013875 312 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNP 391 (434)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnp 391 (434)
+.++.|+.|+|++.|.+ ..|. |.|-+.+ . -+.+.||....+.|.++.|
T Consensus 62 l~Vp~G~~V~~~vts~D----V~Hs-------f~ip~~~------------------~---k~d~~PG~~~~~~~~~~~~ 109 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD----VIHG-------FHVEGTN------------------I---NVEVLPGEVSTVRYTFKRP 109 (135)
T ss_dssp EEEETTSEEEEEEEBSS----SCEE-------EEETTSS------------------C---EEEECBTBCEEEEEECCSC
T ss_pred EEEcCCCEEEEEEEeCC----ccce-------EEecCCC------------------c---eeEeCCCCcEEEEEEcCCC
Confidence 88999999999998853 3343 4432111 0 1345677778899999999
Q ss_pred eeeEEeecc---hhhHHccceeEEEEe
Q 013875 392 GVWFMHCHL---ELHTGWGLKTAFAVE 415 (434)
Q Consensus 392 G~w~~HCHi---l~H~d~GM~~~~~v~ 415 (434)
|.|.++|.. ..| .+|-+.+.|+
T Consensus 110 G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 110 GEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEECcccCCCCc--CCCEEEEEEE
Confidence 999999977 566 5999988875
No 101
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.89 E-value=0.04 Score=45.36 Aligned_cols=89 Identities=12% Similarity=0.227 Sum_probs=61.1
Q ss_pred eEeecC-CeEEEEEEeCCCCC--CCCCCccccCCceEEEEecC-----------C---cCCCCCCCCCCCCCCCCcccee
Q 013875 312 SKIAFN-STIELVLQDTNLLT--VESHPFHLHGYNFFVVGTGI-----------G---NFDPVKYPANYNLVDPIERNTA 374 (434)
Q Consensus 312 ~~~~~g-~~v~~vl~N~~~~~--~~~HP~HlHG~~F~Vl~~g~-----------g---~~~~~~~~~~~n~~~p~~rDTv 374 (434)
+.++.| +.|.+++.|.+.+. ++.|- |-+...+. | .+-+..+ .-....+.
T Consensus 20 i~V~~G~~~vtv~~~N~g~~~~~~m~H~-------~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~-------~~~~~~t~ 85 (129)
T 1cuo_A 20 ISVPASCAEFTVNFEHKGHMPKTGMGHN-------WVLAKSADVGDVAKEGAHAGADNNFVTPGD-------KRVIAFTP 85 (129)
T ss_dssp EEEETTCSEEEEEEEECSSSCHHHHCBC-------CEEEEGGGHHHHHHHHHTTCGGGTTSCTTC-------TTCSEECC
T ss_pred EEEcCCCeEEEEEEEECCCCcccccccc-------eEEecCcchhhhHHHhhhcccccccccccc-------ccceeeee
Confidence 899999 99999999975211 12344 44443321 0 1111000 00123566
Q ss_pred EecCCcEEEEEEEcC---CceeeEEeecchhhHHccceeEEEEe
Q 013875 375 AVPTGGWTAIRFRAD---NPGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 375 ~vp~~g~v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
.|.||+...+.|.++ .||.|-|.|-+--|.. ||-+.+.|+
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 789999999999997 9999999999888988 899999885
No 102
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=95.75 E-value=0.035 Score=43.32 Aligned_cols=59 Identities=17% Similarity=0.312 Sum_probs=44.8
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEE
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAA 161 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a 161 (434)
+..++|++|++++|++.|.+.. .+.+.+++..+ ...+.||+..++.++++++ |.|.+.=
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~~-~H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~~~-G~Y~y~C 85 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGKS-EHTFTIKKLGI----------------DVVVESGKEKNITVKPKSA-GTYELIC 85 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSSS-CEEEEEGGGTE----------------EEEECTTCEEEEEECCCSC-EEEEEEC
T ss_pred CCEEEECCCCEEEEEEEcCCCc-eEEEEEecCCc----------------ceeecCCcceeEEEecccC-ceEEEEC
Confidence 5679999999999999998743 34455544322 2457899999999998875 9997764
No 103
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.67 E-value=0.028 Score=45.77 Aligned_cols=72 Identities=19% Similarity=0.257 Sum_probs=45.8
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|++|.|+ |.+ ..|-+++.. +.+... -..+.+.+|+...+.| +.
T Consensus 22 ~i~V~~GdtV~f~--n~d----~~H~v~~~~----------~~~p~~-------------~~~~~~~~g~t~~~tF--~~ 70 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTD----KGHNVETIK----------GMIPDG-------------AEAFKSKINENYKVTF--TA 70 (122)
T ss_dssp EEEECTTEEEEEE--ESS----SSCCCEECT----------TCSCTT-------------CCCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC----CCcEEEEcc----------cccCCC-------------cceeecCCCCEEEEEe--CC
Confidence 4789999999886 432 246555543 111100 0011234666655555 89
Q ss_pred ceeeEEeecchhhHHccceeEEEEecC
Q 013875 391 PGVWFMHCHLELHTGWGLKTAFAVEDG 417 (434)
Q Consensus 391 pG~w~~HCHil~H~d~GM~~~~~v~~~ 417 (434)
||.|.|+|-+ |.. |.+.+.|.+.
T Consensus 71 ~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 71 PGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp CEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 9999999987 665 9999999863
No 104
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=95.04 E-value=0.076 Score=43.57 Aligned_cols=44 Identities=16% Similarity=0.311 Sum_probs=38.4
Q ss_pred cceeEecCCcEEEEEEEcC--Ccee-eEEeecchhhHHccceeEEEEe
Q 013875 371 RNTAAVPTGGWTAIRFRAD--NPGV-WFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 371 rDTv~vp~~g~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~v~ 415 (434)
..|..|.||+...+.|.+. .+|. |-|.|-+--|.. ||-+.+.|.
T Consensus 81 ~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 81 AHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 3566789999999999998 8995 999999988988 999999885
No 105
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=94.86 E-value=0.052 Score=45.13 Aligned_cols=78 Identities=12% Similarity=0.240 Sum_probs=47.4
Q ss_pred CceeEEEeCCcEEEEEEEecC-CCCeeEEEEcCC--eeEEEE-------eCCcccC-----CeeeeEEEeCCCCeEEEEE
Q 013875 84 DTFAMEVESGKTYLLRIINAA-LNDELFFAIAGH--NFTVVE-------VDAVYTK-----PFTTEAILIAPGQTTNVLV 148 (434)
Q Consensus 84 ~~~~~~v~~g~~~rlR~iN~~-~~~~~~~~i~g~--~~~via-------~DG~~~~-----p~~~~~~~l~~geR~dv~v 148 (434)
.+..++|++|++++|++.|.. ....+.+.+.+. .+.-.. .|..++. ....++..|.||++.++.+
T Consensus 31 ~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~ 110 (140)
T 1qhq_A 31 AQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTF 110 (140)
T ss_dssp SCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEE
T ss_pred eCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEE
Confidence 356899999999999999932 122333333211 000000 0111221 1234567899999999999
Q ss_pred EeCCCCCceEEEEe
Q 013875 149 QANQKPGRYFMAAR 162 (434)
Q Consensus 149 ~~~~~~g~~~l~a~ 162 (434)
+++++ |.|++.-.
T Consensus 111 ~~~~~-G~y~f~C~ 123 (140)
T 1qhq_A 111 RTPAP-GTYLYICT 123 (140)
T ss_dssp ECCSS-EEEEEECC
T ss_pred EeCCC-eeEEEEeC
Confidence 99774 99987744
No 106
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.74 E-value=0.095 Score=43.05 Aligned_cols=43 Identities=16% Similarity=0.310 Sum_probs=37.6
Q ss_pred ceeEecCCcEEEEEEEcC--Ccee-eEEeecchhhHHccceeEEEEe
Q 013875 372 NTAAVPTGGWTAIRFRAD--NPGV-WFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 372 DTv~vp~~g~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~v~ 415 (434)
.|..|.||+...+-|.++ .+|. |-|.|-+--|.. ||-+.+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 83 HTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 466789999999999998 7866 999999988988 899999885
No 107
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=94.64 E-value=0.008 Score=47.46 Aligned_cols=72 Identities=18% Similarity=0.269 Sum_probs=42.8
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEE
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAA 161 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a 161 (434)
+..++|++|++++|+ |.+. ..+.+.+++..+.. .+|..-.....+.+.+.|||++++.++++..+|.|++.-
T Consensus 19 P~~i~v~~Gd~V~~~--n~~~-~~H~~~~~~~~~~~--~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C 90 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NNKV-PPHNVVFDAALNPA--KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYC 90 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSS-SCCCBEECSSSSTT--CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCC-CCceEEEeCCCCcc--cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEe
Confidence 467999999988775 8763 23334444322100 012110111135677899999999776634469998873
No 108
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=94.48 E-value=0.076 Score=45.06 Aligned_cols=83 Identities=17% Similarity=0.189 Sum_probs=49.3
Q ss_pred eEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcC--CeeEEEEeCCcccCCeeeeEEEeCCCC--eEEEEE
Q 013875 73 TYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAG--HNFTVVEVDAVYTKPFTTEAILIAPGQ--TTNVLV 148 (434)
Q Consensus 73 ~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g--~~~~via~DG~~~~p~~~~~~~l~~ge--R~dv~v 148 (434)
.+.++|.. .+.|+|++|++++|++.|.+....+.+.+.. ..+.....+ ..+.+..-....|.||| ..++.+
T Consensus 52 ~~~~~g~~----~p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~PG~sgt~t~tf 126 (154)
T 2cal_A 52 SFEVHDKK----NPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKDGKFGYTDFTW 126 (154)
T ss_dssp CEEETTEE----SCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBTTBEEEEEEEE
T ss_pred cccccCCC----CCEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccc-cccccccccccccCCCCceEEEEEE
Confidence 56778773 4789999999999999997433334344431 111000000 00000000011679999 888888
Q ss_pred EeCCCCCceEEEEe
Q 013875 149 QANQKPGRYFMAAR 162 (434)
Q Consensus 149 ~~~~~~g~~~l~a~ 162 (434)
++ + +|.||..-.
T Consensus 127 t~-~-pGtY~y~C~ 138 (154)
T 2cal_A 127 HP-T-AGTYYYVCQ 138 (154)
T ss_dssp CC-C-SEEEEEECC
T ss_pred EE-C-CceEEEECC
Confidence 88 5 599998754
No 109
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.33 E-value=0.033 Score=45.83 Aligned_cols=77 Identities=13% Similarity=0.137 Sum_probs=46.1
Q ss_pred ceeEEE-eCCcEEEEEEEecCCCC----eeEEEEcCCe-eEEEEe-------CCcccCCe----eeeEEEeCCCCeEEEE
Q 013875 85 TFAMEV-ESGKTYLLRIINAALND----ELFFAIAGHN-FTVVEV-------DAVYTKPF----TTEAILIAPGQTTNVL 147 (434)
Q Consensus 85 ~~~~~v-~~g~~~rlR~iN~~~~~----~~~~~i~g~~-~~via~-------DG~~~~p~----~~~~~~l~~geR~dv~ 147 (434)
+..++| ++|++++|.+.|.+... .+.+.|.... +.-++. |-.++.+- -..+-.|+|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 17 VKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp CSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEE
Confidence 567999 99999999999998642 2434433211 000000 11222111 1133468999999999
Q ss_pred EEeC--CCCCceEEEE
Q 013875 148 VQAN--QKPGRYFMAA 161 (434)
Q Consensus 148 v~~~--~~~g~~~l~a 161 (434)
++++ ++.++|+..=
T Consensus 97 f~~~~l~~G~~Y~f~C 112 (129)
T 2ccw_A 97 FDVSKIAAGENYAYFC 112 (129)
T ss_dssp EEGGGSCTTCCEEEEC
T ss_pred EeccccCCCceEEEEe
Confidence 9997 5434598763
No 110
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.27 E-value=0.21 Score=40.63 Aligned_cols=96 Identities=14% Similarity=0.222 Sum_probs=58.7
Q ss_pred eeEeec-CCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCC-cC--CC-CCC-CCCCC-C-CCCCccceeEecCCcEE
Q 013875 311 LSKIAF-NSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIG-NF--DP-VKY-PANYN-L-VDPIERNTAAVPTGGWT 382 (434)
Q Consensus 311 ~~~~~~-g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g-~~--~~-~~~-~~~~n-~-~~p~~rDTv~vp~~g~v 382 (434)
-+.++. |+.|+++|.|.+.+ |---=||.|-+...+.- .. +. ... ...|- - ...+.-.|..|.||+..
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp EEEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 388876 99999999997622 22222445555432100 00 00 000 00110 0 11244577789999999
Q ss_pred EEEEEcC---CceeeEEeecchhhHHccceeEEEEe
Q 013875 383 AIRFRAD---NPGVWFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 383 ~irf~ad---npG~w~~HCHil~H~d~GM~~~~~v~ 415 (434)
.|-|.+. .+|.|-|-|- -|. ||-+.+.|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999997 8999999999 888 999999873
No 111
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.16 E-value=0.04 Score=45.26 Aligned_cols=76 Identities=16% Similarity=0.213 Sum_probs=45.7
Q ss_pred ceeEEE-eCCcEEEEEEEecCCCC----eeEEEEcCCe-eEEEEeCC-------cccCCe----eeeEEEeCCCCeEEEE
Q 013875 85 TFAMEV-ESGKTYLLRIINAALND----ELFFAIAGHN-FTVVEVDA-------VYTKPF----TTEAILIAPGQTTNVL 147 (434)
Q Consensus 85 ~~~~~v-~~g~~~rlR~iN~~~~~----~~~~~i~g~~-~~via~DG-------~~~~p~----~~~~~~l~~geR~dv~ 147 (434)
+..++| ++|++++|.+.|.+... .+.+.|.... +.-++.|| .++.+- -..+-.|+|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (128)
T 1nwp_A 17 TKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEE
Confidence 567999 99999999999998642 2444443211 00001111 222211 1123358999999999
Q ss_pred EEeC--CCCCceEEE
Q 013875 148 VQAN--QKPGRYFMA 160 (434)
Q Consensus 148 v~~~--~~~g~~~l~ 160 (434)
++++ ++.++|+..
T Consensus 97 f~~~~l~~G~~Y~f~ 111 (128)
T 1nwp_A 97 FDVSKLAAGEKYGFF 111 (128)
T ss_dssp EEGGGSCTTSCEEEE
T ss_pred EeccccCCCceEEEE
Confidence 9987 442349776
No 112
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.14 E-value=0.17 Score=41.38 Aligned_cols=44 Identities=16% Similarity=0.331 Sum_probs=37.6
Q ss_pred cceeEecCCcEEEEEEEcC--Ccee-eEEeecchhhHHccceeEEEEe
Q 013875 371 RNTAAVPTGGWTAIRFRAD--NPGV-WFMHCHLELHTGWGLKTAFAVE 415 (434)
Q Consensus 371 rDTv~vp~~g~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~v~ 415 (434)
..|-.|.||+...+.|.+. .+|. |-|.|-+--|.. ||-+.+.|.
T Consensus 82 ~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 82 AHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 3455789999999999997 7876 999999988988 899998873
No 113
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.09 E-value=0.19 Score=43.13 Aligned_cols=72 Identities=18% Similarity=0.297 Sum_probs=54.0
Q ss_pred eEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCCc
Q 013875 312 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNP 391 (434)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnp 391 (434)
+.++.|+.|+|.+.|. +..|.|-+=.... . +.+-||..-.+.|.++.|
T Consensus 95 l~VP~G~~Vr~~vTS~----DViHsf~IP~lgi-------------------------k---~da~PG~~n~~~~~~~kp 142 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP----DVIHGFHVEGTNI-------------------------N---VEVLPGEVSTVRYTFKRP 142 (168)
T ss_dssp EEEETTSEEEEEEECS----SSCEEEEETTSSC-------------------------E---EEECTTBCEEEEEECCSC
T ss_pred EEEeCCCeEEEEEecC----CceEEEEECCCCe-------------------------E---EEecCCceeEEEEEeCCC
Confidence 7899999999999985 4566655433211 1 234467778899999999
Q ss_pred eeeEEeecc-hhhHHccceeEEEEe
Q 013875 392 GVWFMHCHL-ELHTGWGLKTAFAVE 415 (434)
Q Consensus 392 G~w~~HCHi-l~H~d~GM~~~~~v~ 415 (434)
|.|.+.|.. --+.+.+|.+.+.|+
T Consensus 143 G~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 143 GEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEEEEECCcCCCCCcCCCEEEEEEe
Confidence 999999985 335568999999886
No 114
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=93.47 E-value=0.27 Score=40.24 Aligned_cols=75 Identities=16% Similarity=0.239 Sum_probs=45.5
Q ss_pred ceeEEE-eCCcEEEEEEEecCCCC----eeEEEEcCC-eeEEEEe-------CCcccC---Ce-eeeEEEeCCCCeEEEE
Q 013875 85 TFAMEV-ESGKTYLLRIINAALND----ELFFAIAGH-NFTVVEV-------DAVYTK---PF-TTEAILIAPGQTTNVL 147 (434)
Q Consensus 85 ~~~~~v-~~g~~~rlR~iN~~~~~----~~~~~i~g~-~~~via~-------DG~~~~---p~-~~~~~~l~~geR~dv~ 147 (434)
+..++| ++|++++|.+.|.+... .+++.|... .+.-++. |-.++. +. -..+-.|+|||++++.
T Consensus 16 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vt 95 (128)
T 2iaa_C 16 TKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVT 95 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEE
Confidence 567999 99999999999998542 244443321 1100011 112221 11 1233468999999999
Q ss_pred EEeC--CCCC-ceEEE
Q 013875 148 VQAN--QKPG-RYFMA 160 (434)
Q Consensus 148 v~~~--~~~g-~~~l~ 160 (434)
++++ ++ | +|+..
T Consensus 96 f~~~~l~~-G~~Y~f~ 110 (128)
T 2iaa_C 96 FDVSKLKE-GEDYAFF 110 (128)
T ss_dssp EESSCCCT-TCCEEEE
T ss_pred EeccccCC-CceEEEE
Confidence 9987 54 7 59776
No 115
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=93.40 E-value=0.13 Score=44.16 Aligned_cols=78 Identities=21% Similarity=0.322 Sum_probs=46.6
Q ss_pred CceeEEE-eCCcEEEEEEEecCCCC----eeEEEEcCCe-eEEEEe------CCcccCC----eeeeEEEeCCCCeEEEE
Q 013875 84 DTFAMEV-ESGKTYLLRIINAALND----ELFFAIAGHN-FTVVEV------DAVYTKP----FTTEAILIAPGQTTNVL 147 (434)
Q Consensus 84 ~~~~~~v-~~g~~~rlR~iN~~~~~----~~~~~i~g~~-~~via~------DG~~~~p----~~~~~~~l~~geR~dv~ 147 (434)
.+..|+| ++|++++|.+.|.+... .+.|.|.... +.-++. +-.++.+ .-..+-.|.|||++++.
T Consensus 56 ~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svt 135 (167)
T 3ay2_A 56 NTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLT 135 (167)
T ss_dssp SCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred ecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEE
Confidence 3567999 99999999999998542 2333332210 000000 1122221 11234468999999999
Q ss_pred EEeCC-CCCceEEEE
Q 013875 148 VQANQ-KPGRYFMAA 161 (434)
Q Consensus 148 v~~~~-~~g~~~l~a 161 (434)
|+++. .+|.|++.=
T Consensus 136 f~~~~lkpG~Y~f~C 150 (167)
T 3ay2_A 136 LDPAKLADGDYKFAC 150 (167)
T ss_dssp ECGGGGTTSCEEEEC
T ss_pred EecCCCCCcEEEEEc
Confidence 99872 359998763
No 116
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=93.38 E-value=0.024 Score=46.22 Aligned_cols=77 Identities=18% Similarity=0.290 Sum_probs=48.1
Q ss_pred ceeEEEeC-CcEEEEEEEecCCCC----eeEEEEcCC-eeEEEEe-------CCcccCC----eeeeEEEeCCCCeEEEE
Q 013875 85 TFAMEVES-GKTYLLRIINAALND----ELFFAIAGH-NFTVVEV-------DAVYTKP----FTTEAILIAPGQTTNVL 147 (434)
Q Consensus 85 ~~~~~v~~-g~~~rlR~iN~~~~~----~~~~~i~g~-~~~via~-------DG~~~~p----~~~~~~~l~~geR~dv~ 147 (434)
+..|+|++ |+++||.+.|.+... .+++-|... .+.-++. |-.++++ +-..+-.|+|||++++.
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 56899976 999999999999652 344444311 1110111 2234432 22345569999999999
Q ss_pred EEeCC--CCCceEEEE
Q 013875 148 VQANQ--KPGRYFMAA 161 (434)
Q Consensus 148 v~~~~--~~g~~~l~a 161 (434)
++++. .+|+|...=
T Consensus 97 f~~~~l~~~G~y~f~C 112 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFFC 112 (125)
T ss_dssp EEGGGC---CCEEEEC
T ss_pred EeCcCcCCCccEEEEc
Confidence 99983 459987653
No 117
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=93.35 E-value=0.067 Score=43.97 Aligned_cols=77 Identities=13% Similarity=0.131 Sum_probs=46.4
Q ss_pred ceeEEEeCC-cEEEEEEEecCCCC----eeEEEEcCCe-eEEEEeCC-------cccC---Ce-eeeEEEeCCCCeEEEE
Q 013875 85 TFAMEVESG-KTYLLRIINAALND----ELFFAIAGHN-FTVVEVDA-------VYTK---PF-TTEAILIAPGQTTNVL 147 (434)
Q Consensus 85 ~~~~~v~~g-~~~rlR~iN~~~~~----~~~~~i~g~~-~~via~DG-------~~~~---p~-~~~~~~l~~geR~dv~ 147 (434)
+..++|++| ++++|.+.|.+... .+.+.|.... +.-++.|| .++. +. -..+-.|.|||++++.
T Consensus 17 p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 1cuo_A 17 TRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVK 96 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEE
T ss_pred cCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEE
Confidence 568999999 99999999998542 2333332211 00000111 1211 10 1133468999999999
Q ss_pred EEeC--CCCCceEEEE
Q 013875 148 VQAN--QKPGRYFMAA 161 (434)
Q Consensus 148 v~~~--~~~g~~~l~a 161 (434)
++++ ..+|.|+..=
T Consensus 97 f~~~~~~~~G~Y~f~C 112 (129)
T 1cuo_A 97 FKVSALSKDEAYTYFC 112 (129)
T ss_dssp EEGGGCCTTSCEEEEC
T ss_pred EeccccCCCceEEEEe
Confidence 9987 2359998764
No 118
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=92.84 E-value=0.42 Score=35.94 Aligned_cols=60 Identities=20% Similarity=0.383 Sum_probs=40.4
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
+..+++++|++++|+ |.+. ..+.+.+++. . +...+...+.||+.+.+.+ ++ +|.|++.-.
T Consensus 18 P~~i~v~~Gd~V~~~--n~~~-~~H~v~~~~~---------~---~~~~~~~~~~~g~~~~~~f--~~-~G~y~~~C~ 77 (91)
T 1bxv_A 18 PSTIEIQAGDTVQWV--NNKL-APHNVVVEGQ---------P---ELSHKDLAFSPGETFEATF--SE-PGTYTYYCE 77 (91)
T ss_dssp SSEEEECTTCEEEEE--ECSS-CCEEEEETTC---------G---GGCEEEEECSTTCEEEEEC--CS-CEEEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCC-CCcEEEEeCC---------C---ccCcccceeCCCCEEEEEe--CC-CEEEEEEeC
Confidence 467899999998875 7653 3455555541 1 1224567899999988755 44 599988754
No 119
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=92.80 E-value=0.22 Score=38.27 Aligned_cols=68 Identities=21% Similarity=0.251 Sum_probs=42.3
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
+..++|++|++++| .|.+. ..+.+.+.+..+ -+|..-.....+.+.+.|||++++.+ ++ +|.|++.-.
T Consensus 17 P~~i~v~~G~~V~~--~n~~~-~~H~~~~~~~~~----p~~~~~~~~~~~~~~~~pG~~~~~tf--~~-~G~y~y~C~ 84 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAG-FPHNIVFDEDAI----PSGVNADAISRDDYLNAPGETYSVKL--TA-AGEYGYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEECGGGS----CTTCCHHHHCEEEEECSTTCEEEEEC--CS-CEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCC-CceEEEEeCCCC----CCccccccccccceecCCCCEEEEEe--CC-CeEEEEEcC
Confidence 46799999998877 68764 345565554211 01111001124578899999998855 44 599987743
No 120
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=92.56 E-value=0.18 Score=38.74 Aligned_cols=67 Identities=15% Similarity=0.254 Sum_probs=41.7
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
+..++|++|++++|+ |.+. ..+.+.+.+...- |..-.....+.+.+.|||.+++.+ ++ +|.|++.-.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~-~~H~~~~~~~~~p-----g~~~~~~~~~~~~~~pG~~~~~tf--~~-~G~y~~~C~ 84 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNKL-SPHNIVFDADGVP-----ADTAAKLSHKGLLFAAGESFTSTF--TE-PGTYTYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSS-CCEEEEECCSSSC-----HHHHHHHCEEEEECSTTCEEEEEC--CS-CEEEEEECG
T ss_pred CCEEEECCCCEEEEE--ECCC-CCcEEEEeCCCCC-----ccccccccccccccCCCCEEEEEc--CC-CeEEEEEcC
Confidence 467999999998876 7653 3455555442110 000001124678899999998755 44 599988744
No 121
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=92.22 E-value=0.57 Score=48.41 Aligned_cols=70 Identities=16% Similarity=0.191 Sum_probs=53.0
Q ss_pred eEEEcCCCCCCCceeEEEeCCcEEEEEEEecCC--CCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEe
Q 013875 73 TYIINSAPFYLDTFAMEVESGKTYLLRIINAAL--NDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQA 150 (434)
Q Consensus 73 ~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~--~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~ 150 (434)
.+..||+- ..+.++|+.|++++|++.|... ...+.|.+.++.+. ..+.||+..++.+++
T Consensus 503 m~~~n~~f---~pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------~~i~PG~t~t~~Fta 563 (595)
T 1fwx_A 503 MSSVAPSF---SIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------MEIGPQMTSSVTFVA 563 (595)
T ss_dssp EEEETTEE---SCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEEC
T ss_pred EEEecCcc---cCCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------eeeCCCCeEEEEEEC
Confidence 45667762 3678999999999999999653 23566666654321 578999999999999
Q ss_pred CCCCCceEEEEe
Q 013875 151 NQKPGRYFMAAR 162 (434)
Q Consensus 151 ~~~~g~~~l~a~ 162 (434)
+++ |.||..-.
T Consensus 564 ~~p-GtY~yhC~ 574 (595)
T 1fwx_A 564 ANP-GVYWYYCQ 574 (595)
T ss_dssp CSC-EEEEEECC
T ss_pred CCC-EEEEEECC
Confidence 874 99999865
No 122
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=92.01 E-value=0.053 Score=44.46 Aligned_cols=29 Identities=21% Similarity=0.195 Sum_probs=22.1
Q ss_pred ccCCCceEEeccCCCcccCCCCCCCcceEEecCC
Q 013875 4 RSKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRN 37 (434)
Q Consensus 4 ~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~ 37 (434)
-.++|+|||||-. |. ..||.|.++|.+..
T Consensus 70 F~~pG~y~y~C~~----H~-~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 70 LSKPGVYMYQCAP----HV-GMGMIGAIVVGEPA 98 (127)
T ss_dssp CCSCEEEEEECTT----TG-GGTCEEEEEESSCT
T ss_pred eCCCeEEEEEeCC----CC-cCCcEEEEEECcCC
Confidence 3689999999983 33 35999999976644
No 123
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=91.88 E-value=0.12 Score=40.19 Aligned_cols=64 Identities=16% Similarity=0.213 Sum_probs=39.6
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcc--------cCCeeeeEEEeCCCCeEEEEEEeCCCCCc
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVY--------TKPFTTEAILIAPGQTTNVLVQANQKPGR 156 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~--------~~p~~~~~~~l~~geR~dv~v~~~~~~g~ 156 (434)
+..++|++|++++|+ |.+.. .|.+.+..-+|.. ......+.+.+.|||++++-+ ++ +|.
T Consensus 16 P~~i~v~~G~tV~~~--n~~~~--------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~-~G~ 82 (102)
T 1kdj_A 16 PDSITVSAGEAVEFT--LVGET--------GHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV--ST-PGT 82 (102)
T ss_dssp SSEEEECTTCCEEEE--ECSSS--------CBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CS-CEE
T ss_pred CCEEEECCCCEEEEE--ECCCC--------CeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe--CC-CeE
Confidence 467999999998875 77632 2444433223321 011112557789999998855 44 599
Q ss_pred eEEEE
Q 013875 157 YFMAA 161 (434)
Q Consensus 157 ~~l~a 161 (434)
|++.-
T Consensus 83 y~y~C 87 (102)
T 1kdj_A 83 YTFYC 87 (102)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 98764
No 124
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=91.64 E-value=0.082 Score=43.04 Aligned_cols=27 Identities=15% Similarity=-0.008 Sum_probs=20.9
Q ss_pred ccCCCceEEeccCCCcccCCCCCCCcceEEec
Q 013875 4 RSKSKARKWVCHRTCQMHTQSTGSQGPSFHVL 35 (434)
Q Consensus 4 ~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~ 35 (434)
-.++|+|||+|- .|. ..||.|.++|.+
T Consensus 68 F~~pG~y~y~C~----~H~-~~GM~G~I~V~~ 94 (123)
T 3erx_A 68 VTEPGLYGVKCT----PHF-GMGMVGLVQVGD 94 (123)
T ss_dssp ECSCEEEEEECG----GGT-TTTCEEEEEESS
T ss_pred eCCCeEEEEEeC----CCC-cCCcEEEEEECC
Confidence 368999999998 343 358999999654
No 125
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=91.33 E-value=0.43 Score=36.47 Aligned_cols=64 Identities=23% Similarity=0.335 Sum_probs=39.8
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCccc--CCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT--KPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~--~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
+..++|++|++++|+ |.+.. .|.+.+.+.+. +. .....+.+.+.|||++++.+ ++ +|.|++.-.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~--------~H~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~tf--~~-~G~y~y~C~ 83 (97)
T 1b3i_A 18 PKALSISAGDTVEFV--MNKVG--------PHNVIFDKVPA-GESAPALSNTKLAIAPGSFYSVTL--GT-PGTYSFYCT 83 (97)
T ss_dssp SSEEEECTTCEEEEE--ECSSC--------CCCBEEEECCT-TSCHHHHCBCCCCCSCSCCEEEEC--CS-CSEEEEECS
T ss_pred CCEEEECCCCEEEEE--ECCCC--------CeEEEEeCCCC-ccccccccccceecCCCCEEEEEe--CC-CeEEEEEcc
Confidence 457899999988765 76531 34554443221 11 01113567789999998855 44 599987743
No 126
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=90.16 E-value=0.73 Score=35.35 Aligned_cols=67 Identities=16% Similarity=0.141 Sum_probs=39.6
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEE
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAA 161 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a 161 (434)
+..++|++|++++|+ |.+. ..+.+.+....+ -+|........+.+.+.||+++++-+ ++ +|.|++.=
T Consensus 17 P~~i~v~~GdtV~~~--n~~~-~~H~v~~~~~~~----p~g~~~~~~~~~~~~~~~g~~~~~tf--~~-~G~y~y~C 83 (98)
T 1iuz_A 17 PSKISVAAGEAIEFV--NNAG-FPHNIVFDEDAV----PAGVDADAISYDDYLNSKGETVVRKL--ST-PGVYGVYC 83 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSS-CCEEEEECTTSS----CTTCCHHHHCEEEEECSTTCEEEEEC--CS-CEEEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCC-CCEEEEEeCCCC----ccccccccccccccccCCCCEEEEEc--CC-CEEEEEEc
Confidence 567999999988775 7764 334444432100 01111111123457899999988855 44 59998764
No 127
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=89.82 E-value=0.53 Score=36.79 Aligned_cols=63 Identities=16% Similarity=0.128 Sum_probs=39.6
Q ss_pred CceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 84 DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 84 ~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
.++.++|++|++++| .|.+. ..+.+.+++. .||.. ..++-.|.||+++++.+ ++ +|.|++.-.
T Consensus 31 ~P~~i~v~~Gd~V~~--~N~d~-~~H~v~~~~~------~~g~~----~~~~~~~~pG~~~~~tf--~~-~G~y~y~C~ 93 (105)
T 2ov0_A 31 ETPELHVKVGDTVTW--INREA-MPHNVHFVAG------VLGEA----ALKGPMMKKEQAYSLTF--TE-AGTYDYHCT 93 (105)
T ss_dssp SSSEEEECTTCEEEE--EECSS-SCBCCEECTT------TSSSS----CEECCCBCTTEEEEEEE--CS-CEEEEEECS
T ss_pred cCCEEEECCCCEEEE--EECCC-CCEEEEEcCC------CCCcc----cccccccCCCCEEEEEe--CC-CEEEEEEeC
Confidence 357899999999877 48874 3344444431 13431 12223478999988765 44 599988743
No 128
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=89.21 E-value=0.13 Score=41.89 Aligned_cols=27 Identities=15% Similarity=-0.070 Sum_probs=20.3
Q ss_pred ccCCCceEEeccCCCcccCCCCCCCcceEEec
Q 013875 4 RSKSKARKWVCHRTCQMHTQSTGSQGPSFHVL 35 (434)
Q Consensus 4 ~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~ 35 (434)
-.++|+|||||- .|. ..||.|.++|.+
T Consensus 69 F~~~G~y~Y~C~----~H~-~~GM~G~I~V~~ 95 (124)
T 3ef4_A 69 AEKEGLYVLKCA----PHY-GMGMVVLVQVGK 95 (124)
T ss_dssp CCSSEEEEEECT----TTG-GGTCEEEEEESS
T ss_pred eCCCeEEEEEcC----CCC-cCCCEEEEEECC
Confidence 368999999995 232 349999998654
No 129
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=87.65 E-value=0.24 Score=40.25 Aligned_cols=27 Identities=15% Similarity=0.031 Sum_probs=20.8
Q ss_pred ccCCCceEEeccCCCcccCCCCCCCcceEEec
Q 013875 4 RSKSKARKWVCHRTCQMHTQSTGSQGPSFHVL 35 (434)
Q Consensus 4 ~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~ 35 (434)
-.++|+|||+|-. |. ..||.|.++|.+
T Consensus 68 F~~~G~y~y~C~~----H~-~~gM~G~I~V~~ 94 (123)
T 1pmy_A 68 FDKEGVYGFKCAP----HY-MMGMVALVVVGD 94 (123)
T ss_dssp CCSCEEEEEECST----TT-TTTCEEEEEESS
T ss_pred eCCCeEEEEEeCC----cc-ccCCEEEEEEcC
Confidence 3689999999963 33 359999999654
No 130
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=87.35 E-value=0.58 Score=35.87 Aligned_cols=68 Identities=19% Similarity=0.195 Sum_probs=39.9
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccC--CeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK--PFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~--p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
+..++|++|++++| .|.+. ..+.+.+.+..+ -+|.... ....+.+.+.|||.+++.+ ++ +|.|++.-.
T Consensus 16 P~~i~v~~G~tV~~--~n~~~-~~H~~~~~~~~~----p~g~~~~~~~~~~~~~~~~~G~~~~~~f--~~-~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKITF--KNNAG-FPHNDLFDKKEV----PAGVDVTKISMPEEDLLNAPGEEYSVTL--TE-KGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEEEE--EECSS-CCBCCEECTTSS----CTTCCHHHHSCCTTCCBCSTTCEEEEEE--CS-CEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCC-CcceEEEeCCCC----ccccccccccccccceeeCCCCEEEEEe--CC-CcEEEEEcC
Confidence 45799999998777 68764 233344443211 1221110 0113446789999998865 44 599887743
No 131
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=87.03 E-value=0.46 Score=38.50 Aligned_cols=27 Identities=15% Similarity=-0.028 Sum_probs=20.5
Q ss_pred ccCCCceEEeccCCCcccCCCCCCCcceEEec
Q 013875 4 RSKSKARKWVCHRTCQMHTQSTGSQGPSFHVL 35 (434)
Q Consensus 4 ~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~ 35 (434)
-.++|+|||+|-. |. ..||.|.++|.+
T Consensus 68 F~~~G~y~y~C~~----H~-~~gM~G~I~V~~ 94 (123)
T 1paz_A 68 VTQPGAYLVKCTP----HY-AMGMIALIAVGD 94 (123)
T ss_dssp CCSCEEEEEECTT----TG-GGTCEEEEEESS
T ss_pred eCCCEEEEEEeCC----cc-cCCCEEEEEEcC
Confidence 3689999999962 32 359999999654
No 132
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=86.29 E-value=0.62 Score=35.73 Aligned_cols=68 Identities=19% Similarity=0.241 Sum_probs=39.9
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCccc-C-CeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-K-PFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~-~-p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
+..++|++|++++| .|.+. ..+.+.+.+..+ -||... . ....+.+.+.|||.+++.+ ++ +|.|++.-.
T Consensus 16 P~~i~v~~G~tV~~--~n~~~-~~H~v~~~~~~~----p~~~~~~~~~~~~~~~~~~~G~~~~~tf--~~-~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAG-FPHNIVFDEDSI----PSGVDASKISMSEEDLLNAKGETFEVAL--SN-KGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCBCCEECTTSS----CTTCCHHHHCCCTTCCBCSTTCEEEEEC--CS-CEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCC-CceEEEEeCCCC----cccccccccccccCccccCCCCEEEEEE--CC-CceEEEEcC
Confidence 46799999998877 68764 234444443211 022110 0 0112346789999998855 44 599987743
No 133
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=85.15 E-value=8.3 Score=30.85 Aligned_cols=72 Identities=13% Similarity=0.201 Sum_probs=50.4
Q ss_pred CCcE--EEEEEEecCCCCeeEEEEc-CCe--eEEEEeCCcccC--------CeeeeEEEeCCCCeEEEEEEeCC--CCCc
Q 013875 92 SGKT--YLLRIINAALNDELFFAIA-GHN--FTVVEVDAVYTK--------PFTTEAILIAPGQTTNVLVQANQ--KPGR 156 (434)
Q Consensus 92 ~g~~--~rlR~iN~~~~~~~~~~i~-g~~--~~via~DG~~~~--------p~~~~~~~l~~geR~dv~v~~~~--~~g~ 156 (434)
.|+. ..|-+.|.+. ....+.+. |++ |.|...+|..+- ........|.|||...+-.+.++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~-~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSE-RAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSS-SCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCC-CcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 4554 4577889885 45557665 555 455555576651 23457889999999999999995 3699
Q ss_pred eEEEEecc
Q 013875 157 YFMAARPF 164 (434)
Q Consensus 157 ~~l~a~~~ 164 (434)
|.+.+...
T Consensus 95 Ytl~a~l~ 102 (120)
T 3isy_A 95 YEVKVTFK 102 (120)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 99998754
No 134
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=83.55 E-value=4.5 Score=33.12 Aligned_cols=58 Identities=21% Similarity=0.367 Sum_probs=42.9
Q ss_pred eeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 86 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 86 ~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
..+.|+.|+++||++-|.. ..+.+.+.+..+ .+.+.||+.-.+.++++++ |.|...-.
T Consensus 60 ~~l~Vp~G~~V~~~vts~D--V~Hsf~ip~~~~----------------k~d~~PG~~~~~~~~~~~~-G~y~~~C~ 117 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD--VIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKRP-GEYRIICN 117 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS--SCEEEEETTSSC----------------EEEECBTBCEEEEEECCSC-EEEEEECC
T ss_pred CEEEEcCCCEEEEEEEeCC--ccceEEecCCCc----------------eeEeCCCCcEEEEEEcCCC-EEEEEECc
Confidence 4699999999999988764 355555554332 2456789888889998875 99988754
No 135
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=82.82 E-value=5.2 Score=40.94 Aligned_cols=61 Identities=20% Similarity=0.297 Sum_probs=48.0
Q ss_pred ceeEEEeCCcEEEEEEEecCC--CCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 85 TFAMEVESGKTYLLRIINAAL--NDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~--~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
+..++|+.|+++||.+-|... ...+.+.|.+..+. +.+.||+...+.++++++ |.|+..=.
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------~DaiPGrtnsvtFtadkP-GvY~y~CS 619 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------MEISPQQTSSITFVADKP-GLHWYYCS 619 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCSC-EEEEEECC
T ss_pred CCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------eeeCCCCeEEEEEEcCCC-EEEEEECC
Confidence 467999999999999999742 45666777665432 268899999999999885 99998754
No 136
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=82.59 E-value=2 Score=33.47 Aligned_cols=62 Identities=15% Similarity=0.104 Sum_probs=37.7
Q ss_pred CceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEE
Q 013875 84 DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAA 161 (434)
Q Consensus 84 ~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a 161 (434)
.+..++|++|++++|+ |.+.. .+.+.+.... .|. . ..++-.|.+|+++++-+ ++ +|.|.+.-
T Consensus 32 ~P~~i~V~~G~tV~~~--N~d~~-~H~v~~~~~~------~~~--~--~~~s~~l~~g~~~~~tf--~~-~G~y~~~C 93 (106)
T 1id2_A 32 LTPEVTIKAGETVYWV--NGEVM-PHNVAFKKGI------VGE--D--AFRGEMMTKDQAYAITF--NE-AGSYDYFC 93 (106)
T ss_dssp SSSEEEECTTCEEEEE--ECSSS-CBCCEECTTT------SSS--S--CEECCCBCTTEEEEEEE--CS-CEEEEEEC
T ss_pred eCCEEEECCCCEEEEE--ECCCC-cEEEEEeCCC------CCc--c--cccccccCCCCEEEEEe--CC-CEEEEEEe
Confidence 4578999999998776 87642 2333332211 010 1 12334578999988765 44 49988764
No 137
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=78.64 E-value=3.6 Score=33.45 Aligned_cols=62 Identities=15% Similarity=0.078 Sum_probs=38.2
Q ss_pred CceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEE
Q 013875 84 DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAA 161 (434)
Q Consensus 84 ~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a 161 (434)
.+..++|++|++++|+ |.+.. .+.+.+.... +|. ...++-.+.|||++++-+ ++ +|.|++.=
T Consensus 58 ~P~~i~V~~GdtV~~~--N~d~~-~H~v~~~~~~------~g~----~~~~s~~l~pG~t~~~tF--~~-~G~y~y~C 119 (132)
T 3c75_A 58 LTPEVTIKAGETVYWV--NGEVM-PHNVAFKKGI------VGE----DAFRGEMMTKDQAYAITF--NE-AGSYDYFC 119 (132)
T ss_dssp SSSEEEECTTCEEEEE--ECSSS-CBCCEECTTT------SSS----SCEECCCBCTTEEEEEEE--CS-CEEEEEEC
T ss_pred eCCEEEECCCCEEEEE--ECCCC-ceEEEEeCCC------CCc----ccccccccCCCCEEEEEc--CC-CEEEEEEe
Confidence 4578999999998875 87642 2333332211 111 123344578999998766 44 59998874
No 138
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=76.81 E-value=10 Score=32.32 Aligned_cols=58 Identities=21% Similarity=0.382 Sum_probs=43.4
Q ss_pred eeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 86 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 86 ~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
..+.++.|+.+||++-|. ...+.+.|.+..+ .+.+.||+.-.+.++++++ |.|+.+-.
T Consensus 93 n~l~VP~G~~Vr~~vTS~--DViHsf~IP~lgi----------------k~da~PG~~n~~~~~~~kp-G~y~g~Cs 150 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP--DVIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKRP-GEYRIICN 150 (168)
T ss_dssp SSEEEETTSEEEEEEECS--SSCEEEEETTSSC----------------EEEECTTBCEEEEEECCSC-EEEEEECC
T ss_pred CEEEEeCCCeEEEEEecC--CceEEEEECCCCe----------------EEEecCCceeEEEEEeCCC-EEEEEECC
Confidence 458899999999999875 4566666665432 2346789988889999885 99988754
No 139
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=73.63 E-value=0.79 Score=37.02 Aligned_cols=25 Identities=12% Similarity=-0.126 Sum_probs=20.2
Q ss_pred ccCCCceEEeccCCCcccCCCCCCCcceEEec
Q 013875 4 RSKSKARKWVCHRTCQMHTQSTGSQGPSFHVL 35 (434)
Q Consensus 4 ~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~ 35 (434)
-.++|+|||+|-. |. .|.|.++|.+
T Consensus 68 F~~~G~y~y~C~~----H~---~M~G~I~V~~ 92 (122)
T 2ux6_A 68 FTAPGVYGVKCTP----HP---FMVGVVQVGD 92 (122)
T ss_dssp ECSCEEEEEEETT----EE---EEEEEEEESS
T ss_pred eCCCEEEEEEeCC----Cc---cCEEEEEEeC
Confidence 3689999999964 66 5999999655
No 140
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=68.11 E-value=14 Score=29.21 Aligned_cols=47 Identities=23% Similarity=0.409 Sum_probs=32.7
Q ss_pred EEEEEEEecCCC-CeeEEEEcCC-eeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeC
Q 013875 95 TYLLRIINAALN-DELFFAIAGH-NFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQAN 151 (434)
Q Consensus 95 ~~rlR~iN~~~~-~~~~~~i~g~-~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~ 151 (434)
.|+|||+|.+.. +.|.|++.|. .+.++. +. .+.+.+||..++-|...
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~~---~i~v~~g~~~~~~v~v~ 82 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------KQ---TIQVEPGEVLNLPMSLG 82 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEES-------CC---EEEECTTCEEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEeC-------CC---cEEECCCCEEEEEEEEE
Confidence 699999999854 5778888774 233332 11 38999999877766553
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=61.32 E-value=23 Score=31.10 Aligned_cols=73 Identities=15% Similarity=0.147 Sum_probs=51.6
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|+.|++.+.+.+ ..|.|-+=.... ..| +-||....+.|.++.
T Consensus 42 ~l~lP~g~~V~~~lTS~D----ViHSF~IP~lgv-------------------------K~d---aiPGr~n~l~~~~~~ 89 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS----VMHSFFIPRLGS-------------------------QIY---AMAGMQTRLHLIANE 89 (205)
T ss_dssp EEEEETTSCEEEEEEESS----SCEEEEEGGGTE-------------------------EEE---ECTTCCEEEEECCSS
T ss_pred eEEEeCCCEEEEEEecCC----ceeeEEecccCc-------------------------EEE---ecCCceEEEEEEeCC
Confidence 488999999999999854 455544432221 122 225666788899999
Q ss_pred ceeeEEeecchhhH-HccceeEEEEe
Q 013875 391 PGVWFMHCHLELHT-GWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~-d~GM~~~~~v~ 415 (434)
||.|...|-..-.. ...|-..+.|.
T Consensus 90 pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 90 PGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp SEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred CeEEEEEcccccccchhhceEEEEEE
Confidence 99999999866554 45677777776
No 142
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=56.41 E-value=32 Score=32.05 Aligned_cols=76 Identities=12% Similarity=0.209 Sum_probs=54.4
Q ss_pred eeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcC
Q 013875 310 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 389 (434)
Q Consensus 310 ~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~ad 389 (434)
+.+.++.|+.|++.+.+. +..|.|.+-.... ..|. -||....+.|.++
T Consensus 189 N~lvlP~g~~V~~~ltS~----DViHsf~iP~lg~-------------------------k~da---iPG~~n~~~~~~~ 236 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT----DVIHAWTIPAFAV-------------------------KQDA---VPGRIAQLWFSVD 236 (298)
T ss_dssp SCEEEESSSEEEEEEEES----SSCEEEEEGGGTE-------------------------EEEE---CTTCCEEEEEECS
T ss_pred ceEEEEcCCEEEEEEEeC----CccceeeEcccCc-------------------------eEEe---cCCceEEEEEEeC
Confidence 348899999999999985 4566665543322 2232 3566678899999
Q ss_pred CceeeEEeecchhh-HHccceeEEEEecC
Q 013875 390 NPGVWFMHCHLELH-TGWGLKTAFAVEDG 417 (434)
Q Consensus 390 npG~w~~HCHil~H-~d~GM~~~~~v~~~ 417 (434)
.||.|...|.-.-- -+..|-..++|.+.
T Consensus 237 ~~G~y~g~CsE~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 237 QEGVYFGQCSELCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp SSEEEEECCCSCCSTTTTSCCEEEEEECH
T ss_pred CCEEEEEEcccccCcCccCCeeEEEEEcH
Confidence 99999999985543 35778888887743
No 143
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=49.83 E-value=46 Score=30.34 Aligned_cols=75 Identities=15% Similarity=0.271 Sum_probs=52.8
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|+.|++.+.+. +..|.|-+-.... ..|. -||....+.|.++.
T Consensus 172 ~l~lP~g~~v~~~~tS~----DViHsf~ip~l~~-------------------------k~da---~PG~~n~~~~~~~~ 219 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGA----DVIHSWTVPAFGV-------------------------KQDA---VPGRLAQLWFRAER 219 (262)
T ss_dssp CEEEETTSEEEEEEEES----SSCEEEEEGGGTE-------------------------EEEE---CBTCCEEEEEECCS
T ss_pred eEEEecCCEEEEEEEEC----cccceeeecccCc-------------------------eEEe---cCCceeEEEEecCC
Confidence 48899999999999985 4556555443221 2332 24666778899999
Q ss_pred ceeeEEeecchhhH-HccceeEEEEecC
Q 013875 391 PGVWFMHCHLELHT-GWGLKTAFAVEDG 417 (434)
Q Consensus 391 pG~w~~HCHil~H~-d~GM~~~~~v~~~ 417 (434)
||.+...|--.--. ...|-..+.|.+.
T Consensus 220 ~G~y~g~Cse~CG~~H~~M~~~v~vv~~ 247 (262)
T 2gsm_B 220 EGIFFGQCSELCGISHAYMPITVKVVSE 247 (262)
T ss_dssp CEEEEECCCSCCSTTGGGCCEEEEEECH
T ss_pred cEEEEEEChHhcccCcccCeEEEEEEcH
Confidence 99999999865543 4677777777653
No 144
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=38.86 E-value=6.6 Score=31.77 Aligned_cols=24 Identities=21% Similarity=0.178 Sum_probs=19.5
Q ss_pred eeEEEeCCcEEEEEEEecCCCCee
Q 013875 86 FAMEVESGKTYLLRIINAALNDEL 109 (434)
Q Consensus 86 ~~~~v~~g~~~rlR~iN~~~~~~~ 109 (434)
-.++|++||++||.+.|-+....|
T Consensus 71 k~InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEEEEE
Confidence 459999999999999997755444
No 145
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=37.51 E-value=83 Score=27.90 Aligned_cols=76 Identities=9% Similarity=0.191 Sum_probs=52.3
Q ss_pred eeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcC
Q 013875 310 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 389 (434)
Q Consensus 310 ~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~ad 389 (434)
+.+.++.|+.|++.+.+. +..|.|-+-.... ..|. -||..-.+.|.++
T Consensus 140 n~lvlP~~~~Vr~~vtS~----DViHsf~vP~lg~-------------------------K~Da---iPGr~n~~~~~~~ 187 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE----DVLHSWAVPSLGL-------------------------KTDA---IPGRLNQTTLMSS 187 (227)
T ss_dssp SCEEEETTSCEEEEEEES----SSCEEEEEGGGTE-------------------------EEEE---CTTCCEEEEECCS
T ss_pred ceEEEecCCEEEEEEEeC----cccceeeecccCc-------------------------EEEe---cCCceEEEEEecC
Confidence 348899999999999985 4556555433221 2343 2455677889999
Q ss_pred CceeeEEeecchhhH-HccceeEEEEecC
Q 013875 390 NPGVWFMHCHLELHT-GWGLKTAFAVEDG 417 (434)
Q Consensus 390 npG~w~~HCHil~H~-d~GM~~~~~v~~~ 417 (434)
.||.+...|.-.-.. +.-|-..++|.+.
T Consensus 188 ~~G~y~g~Cse~CG~~Hs~M~~~v~vv~~ 216 (227)
T 1v54_B 188 RPGLYYGQCSEICGSNHSFMPIVLELVPL 216 (227)
T ss_dssp SCEEEEECCCSCCSTTGGGCCEEEEEECH
T ss_pred CcEEEEEEehhhcccccccCeEEEEEEcH
Confidence 999999999765543 4567777776643
No 146
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=37.15 E-value=94 Score=23.22 Aligned_cols=68 Identities=10% Similarity=0.143 Sum_probs=37.8
Q ss_pred EeCCcEEEEEEEecCCCCeeEEEEcCC--eeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCC--CCceEEEEec
Q 013875 90 VESGKTYLLRIINAALNDELFFAIAGH--NFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQK--PGRYFMAARP 163 (434)
Q Consensus 90 v~~g~~~rlR~iN~~~~~~~~~~i~g~--~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~--~g~~~l~a~~ 163 (434)
-+||+++++|++-...... -..+. .+.|..-+|..+.-. .........++.-+.++.. .|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~~---p~~~~~~~v~l~dp~g~~v~~~---~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFH---PLNELIPLVYIQDPKGNRIAQW---QSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGC---BCCCEEEEEEEECTTSCEEEEE---EEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCc---CCCCCceEEEEECCCCCEEEEE---EeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 6899999999875432211 01111 345555556544211 1222334566667777653 4899999873
No 147
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=31.70 E-value=1.2e+02 Score=26.63 Aligned_cols=63 Identities=16% Similarity=0.081 Sum_probs=31.5
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCe-eeeEEEeCCCCeEEEEEEeC
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPF-TTEAILIAPGQTTNVLVQAN 151 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~-~~~~~~l~~geR~dv~v~~~ 151 (434)
+|.+++++|+...+||+..+..- --|-..+.-+.++..|-++. ..+.|.|+...|+-+.+...
T Consensus 65 PPl~Rl~p~~~q~lRI~~~~~~L----P~DRESlf~lnv~eIPp~~~~~~n~lqia~r~rIKlFyRP~ 128 (218)
T 4ay0_A 65 PPLFRLDAKQQNSLRIAQAGGVF----PRDKESLKWLCVKGIPPKDEDIWVDVQFAINNCIKLLVRPN 128 (218)
T ss_dssp SSEEEECTTCEEEEEEEECSCCC----CSSSCEEEEEEEEEECC--------------CEEEEEEECT
T ss_pred CCeEEeCCCCceEEEEEecCCCC----CcCcEEEEEEEEEecCCCCccccceeEEEEEEEEEEEEcCc
Confidence 68899999999999999876431 11323333333443332221 12457777777777777654
No 148
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=27.67 E-value=56 Score=25.72 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=28.4
Q ss_pred EEEcCCceeeEEeecchhhHHccceeEE-EEecC
Q 013875 385 RFRADNPGVWFMHCHLELHTGWGLKTAF-AVEDG 417 (434)
Q Consensus 385 rf~adnpG~w~~HCHil~H~d~GM~~~~-~v~~~ 417 (434)
.|..+.+|..-|=|=...|=..||-+.+ .|...
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 4667889999999999999999999999 88654
No 149
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=26.81 E-value=82 Score=27.71 Aligned_cols=20 Identities=15% Similarity=0.296 Sum_probs=18.1
Q ss_pred ceeEEEeCCcEEEEEEEecC
Q 013875 85 TFAMEVESGKTYLLRIINAA 104 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~ 104 (434)
+|.+++++|+...+||+..+
T Consensus 54 PPl~rl~p~~~q~lRI~~~~ 73 (218)
T 2xg5_A 54 PPVQRLEPGAKSMVRLSTTP 73 (218)
T ss_dssp CSEEEECTTCEEEEEEEECG
T ss_pred CCeEEECCCCceEEEEEecC
Confidence 57899999999999999876
No 150
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=26.24 E-value=71 Score=29.94 Aligned_cols=73 Identities=12% Similarity=0.058 Sum_probs=50.5
Q ss_pred eeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcEEEEEEEcCC
Q 013875 311 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 390 (434)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adn 390 (434)
.+.++.|+.|++.+... +..|.|.+-.... ..|.+ ||....+.|.++.
T Consensus 152 ~l~lP~g~~V~~~lTS~----DViHsf~IP~lg~-------------------------k~Dai---PGr~n~~~~~~~~ 199 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSN----SVMNSFFIPRLGS-------------------------QIYAM---AGMQTRLHLIANE 199 (315)
T ss_dssp BCCCCSSSEEEEEECBS----SSCEEEEEGGGTE-------------------------EEEEC---BTSCEEEEEECCS
T ss_pred eEEEeCCCEEEEEEEeC----CccceeeecccCc-------------------------EEeec---CCcceeeEEecCC
Confidence 47889999999999875 4556555443222 23332 4566788899999
Q ss_pred ceeeEEeecchhhH-HccceeEEEEe
Q 013875 391 PGVWFMHCHLELHT-GWGLKTAFAVE 415 (434)
Q Consensus 391 pG~w~~HCHil~H~-d~GM~~~~~v~ 415 (434)
||.|...|--.--. +..|-..+.|.
T Consensus 200 ~G~y~g~CsE~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 200 PGTYDGISASYSGPGFSGMKFKAIAT 225 (315)
T ss_dssp CBCCEEBCCSCCSTTTTTCCEECCBC
T ss_pred CeEEEEeccccchhhHHhccceEEEe
Confidence 99999999765543 45677777665
No 151
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=26.00 E-value=1.7e+02 Score=24.72 Aligned_cols=85 Identities=8% Similarity=0.056 Sum_probs=45.9
Q ss_pred CeEEEcCCCCCCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccC-Ce----eeeE-EE-eCCCCeE
Q 013875 72 PTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK-PF----TTEA-IL-IAPGQTT 144 (434)
Q Consensus 72 d~~lvNG~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~-p~----~~~~-~~-l~~geR~ 144 (434)
+..+.|..+ .+.-.+..|+.++||+-=-.....-.+.+ -|.|-..+|..+- .- .... .. +.+|+.+
T Consensus 52 ~v~l~d~~G----~~~~~~~~Ge~v~l~i~~~~~~~i~~~v~---G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~ 124 (188)
T 2r5o_A 52 DYHIQSAGV----DFPPSLTGNQQTDFLMKVVFEYDFDCVVP---GILIKTLDGLFLYGTNSFLASEGRENISVSRGDVR 124 (188)
T ss_dssp EEEEEETTE----ESCSSEETTCEEEEEEEEEESSCEEEEEE---EEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEE
T ss_pred EEEEEECCC----CEeeEEeCCCEEEEEEEEEECCcCCccEE---EEEEECCCCCEEEecCcccccccccccccCCCCEE
Confidence 344555442 24445788998888865433322222222 2555566666651 00 0111 12 5789965
Q ss_pred EEEEEeC--CCCCceEEEEec
Q 013875 145 NVLVQAN--QKPGRYFMAARP 163 (434)
Q Consensus 145 dv~v~~~--~~~g~~~l~a~~ 163 (434)
.+.+++. =.+|+|.|.+..
T Consensus 125 ~v~f~f~l~L~~G~Y~lsv~i 145 (188)
T 2r5o_A 125 VFKFSLPVDLNSGDYLLSFGI 145 (188)
T ss_dssp EEEEEEECCBCSEEEEEEEEE
T ss_pred EEEEEEecccCCCeEEEEEEE
Confidence 5554444 346999998864
No 152
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=25.20 E-value=95 Score=28.08 Aligned_cols=62 Identities=11% Similarity=0.085 Sum_probs=31.7
Q ss_pred ceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCe-eeeEEEeCCCCeEEEEEEe
Q 013875 85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPF-TTEAILIAPGQTTNVLVQA 150 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~-~~~~~~l~~geR~dv~v~~ 150 (434)
+|.++++||+...+||+..+.. +--|-....-+.++..|-++. ..+.|.|+.-.|+=+.+..
T Consensus 84 PPl~rl~pg~~q~lRI~~~~~~----LP~DrESlf~lnv~eIPp~~~~~~n~Lqiair~rIKLFyRP 146 (257)
T 3q48_A 84 PAVTRVEPNGGAVLRIAYLKAP----LPTDRESLFWLNILEVPPRDEDENNALQFSFRSRFKLFFRP 146 (257)
T ss_dssp SSEEEECTTEEEEEEEEECCCC----CCSSSCEEEEEEEEEECCC---------CCEEEEEEEEEEC
T ss_pred CCEEEECCCCceEEEEEECCCC----CCCCceeEEEEEeeecCCCCCCCCceEEEEEEEEEEEEEec
Confidence 5789999999999999987642 111222322223333332211 1345555555566555554
No 153
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=24.22 E-value=2.7e+02 Score=22.18 Aligned_cols=73 Identities=8% Similarity=0.082 Sum_probs=39.4
Q ss_pred eEEEeCCcEEEEEEE-ecCCCCeeEEEEcCCe-eEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEe
Q 013875 87 AMEVESGKTYLLRII-NAALNDELFFAIAGHN-FTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 162 (434)
Q Consensus 87 ~~~v~~g~~~rlR~i-N~~~~~~~~~~i~g~~-~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~ 162 (434)
.++++.|++..++|= |.+.-....+...... +..+. | ...+|...+.-.++.|...-+.|++.++ |...|...
T Consensus 36 tI~v~~Ge~~~I~L~~NPTTGY~W~~~~~~~~vl~~l~-~-~~y~~~~~~~~~vGagG~~~w~f~A~~~-G~~~i~~~ 110 (132)
T 2wgn_B 36 PLKLTQGQELVLTLPSNPTTGFRWELRNPAASVLKRLG-P-EVYSNSEEDSGLVGSGGESTWRFRVAAS-GDDRLELV 110 (132)
T ss_dssp CEEECTTCEEEEEECCCTTTSCEEEEEECCTTTEEECC-S-CCSCSSCSSCCCSSSSCCEEEEEEECSC-EEEEEEEE
T ss_pred EEEEcCCCEEEEEeCCCCCCCeEEEEecCCCceEEecc-c-ceecCCCCccCCcCCCceEEEEEEEcCC-ceEEEEEE
Confidence 588888988877775 4443223333332222 22221 1 1122221233356777777788888775 87776654
No 154
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=23.07 E-value=3.1e+02 Score=23.79 Aligned_cols=60 Identities=15% Similarity=0.184 Sum_probs=40.8
Q ss_pred eEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEEeccC
Q 013875 87 AMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFN 165 (434)
Q Consensus 87 ~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a~~~~ 165 (434)
.+.++.|+.+||+|-+... .+.|.|...... +..-||..-.+-+.++++ |.|+.+-.-+.
T Consensus 42 ~l~lP~g~~V~~~lTS~DV--iHSF~IP~lgvK----------------~daiPGr~n~l~~~~~~p-G~y~g~CsE~C 101 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSV--MHSFFIPRLGSQ----------------IYAMAGMQTRLHLIANEP-GTYDGICAEIC 101 (205)
T ss_dssp EEEEETTSCEEEEEEESSS--CEEEEEGGGTEE----------------EEECTTCCEEEEECCSSS-EEEEEEECSCC
T ss_pred eEEEeCCCEEEEEEecCCc--eeeEEecccCcE----------------EEecCCceEEEEEEeCCC-eEEEEEccccc
Confidence 5888999999999887543 444555543322 234567777777888775 99998876443
No 155
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=22.38 E-value=83 Score=27.88 Aligned_cols=21 Identities=29% Similarity=0.210 Sum_probs=18.5
Q ss_pred ceeEEEeCCcEEEEEEEecCC
Q 013875 85 TFAMEVESGKTYLLRIINAAL 105 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~ 105 (434)
+|.+++++|+...+||+..+.
T Consensus 53 PPlfRlep~~~q~lRIi~~~~ 73 (224)
T 3gfu_C 53 PSFFKVKPNGQQTLRIIMASD 73 (224)
T ss_dssp SSEEEECTTCEEEEEEEECSC
T ss_pred CCeEEECCCCceEEEEEECCC
Confidence 678999999999999998763
No 156
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=21.45 E-value=1.7e+02 Score=25.63 Aligned_cols=20 Identities=20% Similarity=0.321 Sum_probs=18.2
Q ss_pred ceeEEEeCCcEEEEEEEecC
Q 013875 85 TFAMEVESGKTYLLRIINAA 104 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~ 104 (434)
+|.++++||+...+||+..+
T Consensus 63 PPl~rl~p~~~q~lRI~~~~ 82 (221)
T 2co7_B 63 PPLFRLEANQQSQLRIVRTG 82 (221)
T ss_dssp SSEEEECTTCEEEEEEEECC
T ss_pred CCEEEECCCCceEEEEEECC
Confidence 58899999999999999876
No 157
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=20.96 E-value=3.1e+02 Score=21.64 Aligned_cols=68 Identities=13% Similarity=0.063 Sum_probs=43.4
Q ss_pred EEeCCcEEE--EEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCC-CCCceEEEEeccC
Q 013875 89 EVESGKTYL--LRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ-KPGRYFMAARPFN 165 (434)
Q Consensus 89 ~v~~g~~~r--lR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~-~~g~~~l~a~~~~ 165 (434)
.+++|+.+. ..+-|.|....-.+.+ .+. .||..+.- ..+.|++|+...+.+.... .+|+|.|.+....
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~ly-vng~~v~t---~~v~La~G~s~tv~f~~~~~~~G~~~v~AvVD~ 98 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RVY-INGTLYKN---WTVSLGPKEEKVLTFNWTPTQEGMYRINATVDE 98 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EEE-ETTEEEEE---EEEEECTTCEEEEEEEECCSSCEEEEEEEEEST
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EEE-ECCEEEee---EEeccCCCCeEEEEEEEEcCCCcEEEEEEEEcC
Confidence 678898665 5577988655332222 222 26665432 2346999999888888654 3589999887533
No 158
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=20.91 E-value=1.4e+02 Score=26.71 Aligned_cols=21 Identities=14% Similarity=0.203 Sum_probs=18.5
Q ss_pred ceeEEEeCCcEEEEEEEecCC
Q 013875 85 TFAMEVESGKTYLLRIINAAL 105 (434)
Q Consensus 85 ~~~~~v~~g~~~rlR~iN~~~ 105 (434)
+|.+++++|+...|||+..+.
T Consensus 73 PPlfRlep~~~q~lRIi~~~~ 93 (239)
T 4djm_A 73 PPLFRLDGQQSSRLRIVRTGG 93 (239)
T ss_dssp SSEEEECTTEEEEEEEEECSC
T ss_pred CCeEEECCCCceEEEEEECCC
Confidence 588999999999999998764
No 159
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=20.84 E-value=2.2e+02 Score=20.86 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=30.7
Q ss_pred eeEEEEeCCcccCCeeeeEEEeCCCCeEEEEEEeCCCCCceEEEE
Q 013875 117 NFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAA 161 (434)
Q Consensus 117 ~~~via~DG~~~~p~~~~~~~l~~geR~dv~v~~~~~~g~~~l~a 161 (434)
.++|+..||.|+.-.+|+-=.+.-+|-|.+.....+..|.+.+.+
T Consensus 4 ~v~V~d~~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~ 48 (82)
T 3e8v_A 4 SVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTA 48 (82)
T ss_dssp EEEEECTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEEC
T ss_pred EEEEEcCCCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEEEE
Confidence 578889999999655555444455777777776666556665554
No 160
>2znr_A AMSH-like protease; metal binding protein, alternative splicing, hydrolase, metal-binding, metalloprotease, UBL conjugation pathway, zinc; 1.20A {Homo sapiens} PDB: 2znv_A
Probab=20.69 E-value=27 Score=29.78 Aligned_cols=7 Identities=14% Similarity=-0.173 Sum_probs=5.2
Q ss_pred eEEeccC
Q 013875 10 RKWVCHR 16 (434)
Q Consensus 10 ~wYH~H~ 16 (434)
=|||||-
T Consensus 86 GwyHSHP 92 (178)
T 2znr_A 86 GWIHTHP 92 (178)
T ss_dssp EEEEECS
T ss_pred EEEeCCC
Confidence 3888884
Done!