Query 013877
Match_columns 434
No_of_seqs 479 out of 1982
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 18:46:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013877.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013877hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fr7_A Putative ketol-acid red 100.0 5.8E-89 2E-93 711.8 25.8 365 68-432 11-375 (525)
2 3ulk_A Ketol-acid reductoisome 100.0 1.5E-74 5.1E-79 594.8 28.0 305 71-407 2-322 (491)
3 1np3_A Ketol-acid reductoisome 100.0 1.6E-40 5.5E-45 332.9 17.3 300 106-431 12-317 (338)
4 3tri_A Pyrroline-5-carboxylate 100.0 7E-31 2.4E-35 256.5 20.0 221 112-366 4-235 (280)
5 3gt0_A Pyrroline-5-carboxylate 100.0 1E-28 3.6E-33 235.2 16.8 221 112-367 3-234 (247)
6 2izz_A Pyrroline-5-carboxylate 99.9 3.3E-23 1.1E-27 205.3 20.6 222 112-366 23-257 (322)
7 2rcy_A Pyrroline carboxylate r 99.9 3.6E-21 1.2E-25 183.1 19.3 213 112-366 5-227 (262)
8 1yqg_A Pyrroline-5-carboxylate 99.9 3.9E-21 1.3E-25 182.9 18.9 217 112-366 1-225 (263)
9 2ahr_A Putative pyrroline carb 99.9 6.4E-21 2.2E-25 181.5 19.4 217 111-366 3-226 (259)
10 3c24_A Putative oxidoreductase 99.8 2.7E-19 9.2E-24 173.4 20.3 213 111-352 11-241 (286)
11 3b1f_A Putative prephenate deh 99.8 4.2E-19 1.4E-23 171.7 13.2 230 111-366 6-246 (290)
12 2g5c_A Prephenate dehydrogenas 99.8 1.7E-19 5.8E-24 173.7 10.1 260 111-406 1-275 (281)
13 3ggo_A Prephenate dehydrogenas 99.8 1.3E-18 4.3E-23 172.8 13.0 209 112-343 34-249 (314)
14 2pv7_A T-protein [includes: ch 99.7 3.9E-17 1.3E-21 160.1 19.1 209 112-366 22-235 (298)
15 3ktd_A Prephenate dehydrogenas 99.7 1.5E-17 5.3E-22 167.5 16.0 204 112-343 9-228 (341)
16 2f1k_A Prephenate dehydrogenas 99.7 7.9E-17 2.7E-21 154.6 19.3 225 112-366 1-234 (279)
17 2i76_A Hypothetical protein; N 99.6 2.4E-16 8.3E-21 152.5 7.4 213 112-366 3-218 (276)
18 3ulk_A Ketol-acid reductoisome 99.6 5.9E-17 2E-21 167.6 3.0 98 302-406 354-452 (491)
19 3d1l_A Putative NADP oxidoredu 99.6 9.4E-15 3.2E-19 139.4 18.0 206 108-344 8-216 (266)
20 2dpo_A L-gulonate 3-dehydrogen 99.6 4.5E-14 1.5E-18 140.8 18.8 192 111-336 6-222 (319)
21 3obb_A Probable 3-hydroxyisobu 99.6 3.3E-15 1.1E-19 147.6 10.3 196 111-336 3-206 (300)
22 4e12_A Diketoreductase; oxidor 99.6 7.5E-14 2.6E-18 135.6 17.7 217 111-361 4-247 (283)
23 3dtt_A NADP oxidoreductase; st 99.6 2.1E-14 7.3E-19 136.7 13.4 160 105-287 14-206 (245)
24 4huj_A Uncharacterized protein 99.5 4.9E-14 1.7E-18 132.1 13.3 154 111-287 23-192 (220)
25 2h78_A Hibadh, 3-hydroxyisobut 99.5 1.7E-13 5.7E-18 133.3 16.5 194 111-338 3-208 (302)
26 3dfu_A Uncharacterized protein 99.5 6.6E-14 2.3E-18 134.4 13.1 153 112-324 7-160 (232)
27 1f0y_A HCDH, L-3-hydroxyacyl-C 99.5 6.1E-13 2.1E-17 129.8 19.4 217 111-362 15-262 (302)
28 3qsg_A NAD-binding phosphogluc 99.5 1.2E-13 4E-18 136.4 14.2 95 111-215 24-120 (312)
29 2ew2_A 2-dehydropantoate 2-red 99.5 3.7E-13 1.3E-17 129.7 15.9 153 111-287 3-177 (316)
30 3k6j_A Protein F01G10.3, confi 99.5 2.6E-12 8.8E-17 134.3 22.5 211 90-337 30-265 (460)
31 3pef_A 6-phosphogluconate dehy 99.5 4.8E-13 1.6E-17 129.5 15.6 196 112-339 2-207 (287)
32 3doj_A AT3G25530, dehydrogenas 99.5 8.2E-13 2.8E-17 129.9 16.1 196 111-338 21-226 (310)
33 3pdu_A 3-hydroxyisobutyrate de 99.4 9.6E-13 3.3E-17 127.4 14.9 198 111-340 1-208 (287)
34 4gbj_A 6-phosphogluconate dehy 99.4 5.3E-13 1.8E-17 131.4 13.1 197 112-337 6-208 (297)
35 3g0o_A 3-hydroxyisobutyrate de 99.4 1E-12 3.5E-17 128.4 14.7 198 112-338 8-214 (303)
36 2gf2_A Hibadh, 3-hydroxyisobut 99.4 5.9E-13 2E-17 128.5 12.3 200 112-338 1-205 (296)
37 2uyy_A N-PAC protein; long-cha 99.4 7.9E-13 2.7E-17 129.3 12.9 200 112-342 31-239 (316)
38 3mog_A Probable 3-hydroxybutyr 99.4 4.4E-12 1.5E-16 133.1 18.6 213 111-360 5-244 (483)
39 2zyd_A 6-phosphogluconate dehy 99.4 2E-12 6.9E-17 135.4 16.0 191 112-338 16-231 (480)
40 1zej_A HBD-9, 3-hydroxyacyl-CO 99.4 1.5E-11 5.1E-16 121.5 21.3 203 112-360 13-231 (293)
41 3l6d_A Putative oxidoreductase 99.4 7.9E-12 2.7E-16 122.7 18.6 209 112-353 10-226 (306)
42 3qha_A Putative oxidoreductase 99.4 4E-12 1.4E-16 124.1 15.6 193 112-334 16-212 (296)
43 1jay_A Coenzyme F420H2:NADP+ o 99.4 1.4E-12 5E-17 119.8 11.2 180 112-321 1-200 (212)
44 2p4q_A 6-phosphogluconate dehy 99.4 2.9E-12 9.9E-17 134.9 14.8 148 112-287 11-170 (497)
45 1vpd_A Tartronate semialdehyde 99.4 6.5E-12 2.2E-16 121.3 16.0 197 112-342 6-214 (299)
46 1z82_A Glycerol-3-phosphate de 99.4 2.6E-12 8.9E-17 127.1 12.9 185 112-336 15-238 (335)
47 1evy_A Glycerol-3-phosphate de 99.4 3.9E-12 1.3E-16 127.0 14.3 153 112-284 16-188 (366)
48 3k96_A Glycerol-3-phosphate de 99.4 1.4E-11 4.9E-16 124.3 18.0 152 112-286 30-198 (356)
49 2cvz_A Dehydrogenase, 3-hydrox 99.4 4.4E-12 1.5E-16 121.5 13.5 193 111-342 1-204 (289)
50 1txg_A Glycerol-3-phosphate de 99.4 5.6E-12 1.9E-16 123.3 14.4 156 112-287 1-175 (335)
51 4ezb_A Uncharacterized conserv 99.3 1.1E-11 3.6E-16 122.8 15.2 187 112-332 25-224 (317)
52 1x0v_A GPD-C, GPDH-C, glycerol 99.3 2.7E-11 9.3E-16 119.8 18.0 152 112-286 9-191 (354)
53 1yj8_A Glycerol-3-phosphate de 99.3 2.9E-11 9.9E-16 121.5 18.3 148 111-286 21-208 (375)
54 4dll_A 2-hydroxy-3-oxopropiona 99.3 1.6E-11 5.3E-16 121.4 16.0 194 112-338 32-234 (320)
55 3cky_A 2-hydroxymethyl glutara 99.3 2.1E-11 7.3E-16 117.8 16.2 197 112-342 5-213 (301)
56 2iz1_A 6-phosphogluconate dehy 99.3 3.8E-11 1.3E-15 125.3 19.0 149 112-287 6-164 (474)
57 1yb4_A Tartronic semialdehyde 99.3 2E-11 6.7E-16 117.5 15.4 197 111-342 3-211 (295)
58 4e21_A 6-phosphogluconate dehy 99.3 3.4E-11 1.2E-15 121.8 17.3 151 107-286 19-175 (358)
59 1i36_A Conserved hypothetical 99.3 1.6E-11 5.6E-16 116.6 14.2 90 112-215 1-91 (264)
60 1ygy_A PGDH, D-3-phosphoglycer 99.3 2E-12 6.9E-17 136.9 7.6 169 92-287 123-307 (529)
61 2pgd_A 6-phosphogluconate dehy 99.3 1.9E-11 6.7E-16 127.7 13.2 148 112-287 3-162 (482)
62 2ekl_A D-3-phosphoglycerate de 99.3 9.9E-12 3.4E-16 123.4 9.7 161 92-277 125-295 (313)
63 2qyt_A 2-dehydropantoate 2-red 99.3 4.3E-12 1.5E-16 122.9 6.9 165 112-287 9-187 (317)
64 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.3 6.2E-11 2.1E-15 124.0 16.0 149 112-287 2-164 (478)
65 1ks9_A KPA reductase;, 2-dehyd 99.3 1.8E-11 6.1E-16 116.8 10.9 149 112-287 1-162 (291)
66 2yjz_A Metalloreductase steap4 98.9 6E-13 2E-17 124.0 0.0 151 108-287 17-176 (201)
67 1wdk_A Fatty oxidation complex 99.2 2.8E-10 9.6E-15 124.6 21.0 209 111-359 314-550 (715)
68 4gwg_A 6-phosphogluconate dehy 99.2 1.3E-10 4.3E-15 122.2 16.7 152 112-287 5-164 (484)
69 1wwk_A Phosphoglycerate dehydr 99.2 2.9E-11 1E-15 119.8 10.3 159 93-277 124-293 (307)
70 1gdh_A D-glycerate dehydrogena 99.2 1.5E-11 5.1E-16 122.5 7.2 161 92-278 124-299 (320)
71 3hn2_A 2-dehydropantoate 2-red 99.2 1.4E-10 4.7E-15 113.9 13.3 152 112-287 3-172 (312)
72 1zcj_A Peroxisomal bifunctiona 99.2 7.9E-10 2.7E-14 115.1 19.7 209 111-358 37-270 (463)
73 2wtb_A MFP2, fatty acid multif 99.2 1.4E-09 4.7E-14 119.4 22.2 210 111-360 312-549 (725)
74 2raf_A Putative dinucleotide-b 99.2 3.7E-11 1.3E-15 111.9 8.0 138 106-286 15-169 (209)
75 4dgs_A Dehydrogenase; structur 99.1 1.3E-10 4.4E-15 117.1 10.1 154 92-276 150-317 (340)
76 2vns_A Metalloreductase steap3 99.1 1.6E-10 5.4E-15 107.9 10.0 148 112-287 29-188 (215)
77 1mv8_A GMD, GDP-mannose 6-dehy 99.1 1.2E-09 4.2E-14 112.4 17.5 199 112-336 1-243 (436)
78 2g76_A 3-PGDH, D-3-phosphoglyc 99.1 1.2E-10 4.2E-15 117.0 9.3 156 93-275 147-313 (335)
79 3gg9_A D-3-phosphoglycerate de 99.1 1.2E-10 4.1E-15 117.7 8.7 107 93-212 132-251 (352)
80 3gg2_A Sugar dehydrogenase, UD 99.1 1.3E-09 4.4E-14 113.4 16.3 200 112-336 3-245 (450)
81 3gvx_A Glycerate dehydrogenase 99.1 1.1E-10 3.7E-15 115.3 7.3 102 93-212 106-209 (290)
82 3jtm_A Formate dehydrogenase, 99.1 1.3E-10 4.6E-15 117.4 8.1 108 93-212 144-256 (351)
83 2pi1_A D-lactate dehydrogenase 99.1 1.4E-10 4.7E-15 116.5 8.0 105 93-212 122-230 (334)
84 4g2n_A D-isomer specific 2-hyd 99.1 1.9E-10 6.4E-15 116.1 8.8 107 92-212 151-263 (345)
85 4e5n_A Thermostable phosphite 99.1 1.1E-10 3.7E-15 117.0 7.0 107 93-212 125-236 (330)
86 1qp8_A Formate dehydrogenase; 99.1 1.6E-10 5.4E-15 114.4 7.7 103 93-213 107-211 (303)
87 2dbq_A Glyoxylate reductase; D 99.1 1.8E-10 6E-15 115.2 7.4 93 106-212 146-240 (334)
88 1mx3_A CTBP1, C-terminal bindi 99.1 1.7E-10 5.9E-15 116.4 7.4 107 93-212 143-259 (347)
89 2cuk_A Glycerate dehydrogenase 99.0 1.7E-10 5.9E-15 114.5 7.0 153 92-275 122-287 (311)
90 2nac_A NAD-dependent formate d 99.0 2.8E-10 9.6E-15 116.8 8.1 160 92-275 170-342 (393)
91 2j6i_A Formate dehydrogenase; 99.0 2.9E-10 9.8E-15 115.3 7.7 109 92-212 143-257 (364)
92 4hy3_A Phosphoglycerate oxidor 99.0 4E-10 1.4E-14 114.6 8.6 157 93-276 155-325 (365)
93 3ba1_A HPPR, hydroxyphenylpyru 99.0 2.1E-10 7E-15 115.2 6.4 154 92-275 144-309 (333)
94 2o3j_A UDP-glucose 6-dehydroge 99.0 2.7E-09 9.2E-14 111.6 14.6 207 111-336 9-260 (481)
95 2gcg_A Glyoxylate reductase/hy 99.0 4.7E-10 1.6E-14 111.9 8.1 107 93-212 134-246 (330)
96 2d0i_A Dehydrogenase; structur 99.0 2.6E-10 9E-15 114.1 6.2 105 93-212 122-235 (333)
97 2w2k_A D-mandelate dehydrogena 99.0 4.9E-10 1.7E-14 112.7 7.9 110 92-213 137-257 (348)
98 3pp8_A Glyoxylate/hydroxypyruv 99.0 1.3E-10 4.5E-15 115.8 3.7 105 93-212 123-229 (315)
99 3evt_A Phosphoglycerate dehydr 99.0 1.5E-10 5.2E-15 115.8 4.0 149 93-267 120-277 (324)
100 4a7p_A UDP-glucose dehydrogena 99.0 4.3E-09 1.5E-13 109.5 14.8 199 112-336 9-249 (446)
101 3hg7_A D-isomer specific 2-hyd 99.0 1.1E-10 3.9E-15 116.8 2.7 149 93-268 124-281 (324)
102 3ghy_A Ketopantoate reductase 99.0 2.7E-09 9.1E-14 105.7 11.6 94 112-214 4-107 (335)
103 3pid_A UDP-glucose 6-dehydroge 99.0 1.3E-08 4.4E-13 105.7 17.1 196 112-336 37-266 (432)
104 2q3e_A UDP-glucose 6-dehydroge 99.0 5E-09 1.7E-13 108.9 14.1 204 111-336 5-254 (467)
105 3hwr_A 2-dehydropantoate 2-red 99.0 4.3E-09 1.5E-13 103.8 12.9 101 106-216 15-125 (318)
106 1bg6_A N-(1-D-carboxylethyl)-L 98.9 3.2E-09 1.1E-13 104.4 11.2 96 112-214 5-111 (359)
107 1j4a_A D-LDH, D-lactate dehydr 98.9 1.5E-09 5.2E-14 108.6 8.6 105 93-212 128-235 (333)
108 2y0c_A BCEC, UDP-glucose dehyd 98.9 1.4E-08 4.9E-13 106.2 15.7 204 110-335 7-254 (478)
109 1sc6_A PGDH, D-3-phosphoglycer 98.9 1.1E-09 3.6E-14 112.7 7.0 157 93-275 127-296 (404)
110 3i83_A 2-dehydropantoate 2-red 98.9 2.9E-09 1E-13 104.8 9.5 101 112-221 3-116 (320)
111 2yq5_A D-isomer specific 2-hyd 98.9 1.2E-09 4E-14 110.2 6.7 101 96-212 132-236 (343)
112 3ado_A Lambda-crystallin; L-gu 98.9 3.7E-08 1.3E-12 98.4 17.3 152 112-287 7-182 (319)
113 3k5p_A D-3-phosphoglycerate de 98.9 2.4E-09 8.3E-14 110.6 7.9 104 93-212 138-244 (416)
114 1xdw_A NAD+-dependent (R)-2-hy 98.9 1.9E-09 6.6E-14 107.7 6.7 105 92-212 126-234 (331)
115 1dxy_A D-2-hydroxyisocaproate 98.9 2E-09 6.7E-14 107.8 6.3 104 93-212 126-233 (333)
116 1dlj_A UDP-glucose dehydrogena 98.8 9.3E-08 3.2E-12 97.6 17.5 92 112-212 1-117 (402)
117 3c7a_A Octopine dehydrogenase; 98.8 1.2E-08 4E-13 103.3 8.3 93 112-211 3-115 (404)
118 3g79_A NDP-N-acetyl-D-galactos 98.7 1.7E-07 6E-12 98.3 16.9 201 111-336 18-268 (478)
119 3ego_A Probable 2-dehydropanto 98.7 3.5E-08 1.2E-12 96.9 9.9 101 112-221 3-110 (307)
120 1y81_A Conserved hypothetical 98.7 2.8E-08 9.5E-13 87.6 7.9 114 107-243 11-128 (138)
121 3ojo_A CAP5O; rossmann fold, c 98.7 2.8E-07 9.7E-12 95.5 16.3 200 112-336 12-248 (431)
122 2o4c_A Erythronate-4-phosphate 98.7 1.1E-08 3.8E-13 104.5 4.8 90 106-212 112-207 (380)
123 2hk9_A Shikimate dehydrogenase 98.6 1.3E-08 4.3E-13 98.7 4.2 96 107-213 126-222 (275)
124 3oet_A Erythronate-4-phosphate 98.6 1.2E-08 4.1E-13 104.3 3.9 151 106-287 115-284 (381)
125 4fgw_A Glycerol-3-phosphate de 98.6 2.6E-07 8.8E-12 94.8 13.3 98 112-215 35-155 (391)
126 1lss_A TRK system potassium up 98.6 3.4E-07 1.2E-11 77.3 11.5 96 112-214 5-105 (140)
127 3kb6_A D-lactate dehydrogenase 98.6 5.2E-08 1.8E-12 97.7 6.9 103 94-211 123-229 (334)
128 3d4o_A Dipicolinate synthase s 98.6 1.2E-07 4.1E-12 92.5 9.0 94 106-212 151-244 (293)
129 2duw_A Putative COA-binding pr 98.6 7.6E-08 2.6E-12 85.3 6.5 116 107-243 9-129 (145)
130 2rir_A Dipicolinate synthase, 98.6 1.6E-07 5.3E-12 91.9 9.2 94 106-212 153-246 (300)
131 2i99_A MU-crystallin homolog; 98.5 9.6E-08 3.3E-12 94.3 6.9 90 112-214 136-228 (312)
132 3oj0_A Glutr, glutamyl-tRNA re 98.5 3.9E-08 1.3E-12 85.4 3.6 89 110-211 21-109 (144)
133 1v8b_A Adenosylhomocysteinase; 98.5 9.6E-08 3.3E-12 100.3 7.1 99 99-214 247-346 (479)
134 3zwc_A Peroxisomal bifunctiona 98.5 2.6E-06 9E-11 93.7 18.3 212 109-359 314-550 (742)
135 3g17_A Similar to 2-dehydropan 98.5 8E-09 2.7E-13 100.5 -1.9 97 112-216 3-101 (294)
136 3d64_A Adenosylhomocysteinase; 98.5 1E-07 3.4E-12 100.5 6.3 99 99-214 267-366 (494)
137 3h9u_A Adenosylhomocysteinase; 98.4 2.5E-07 8.5E-12 96.1 7.8 91 106-212 207-298 (436)
138 2d5c_A AROE, shikimate 5-dehyd 98.4 1.2E-07 4.2E-12 90.6 4.9 89 107-211 114-205 (263)
139 2b0j_A 5,10-methenyltetrahydro 98.4 1.1E-05 3.7E-10 79.6 16.4 172 160-363 127-310 (358)
140 1hyh_A L-hicdh, L-2-hydroxyiso 98.3 1.1E-06 3.8E-11 86.1 9.4 95 111-216 1-127 (309)
141 3n58_A Adenosylhomocysteinase; 98.3 1.2E-06 4.3E-11 91.2 10.1 94 106-215 243-337 (464)
142 2dc1_A L-aspartate dehydrogena 98.3 1.1E-06 3.7E-11 82.7 7.7 78 112-211 1-80 (236)
143 2fp4_A Succinyl-COA ligase [GD 98.3 1E-06 3.6E-11 87.2 7.7 122 108-245 11-137 (305)
144 3p2y_A Alanine dehydrogenase/p 98.3 8.3E-07 2.8E-11 90.8 7.0 97 108-212 182-302 (381)
145 3gvp_A Adenosylhomocysteinase 98.3 7.5E-07 2.6E-11 92.4 6.5 91 106-212 216-307 (435)
146 3ce6_A Adenosylhomocysteinase; 98.3 1.9E-06 6.6E-11 90.8 9.2 92 107-214 271-363 (494)
147 2nu8_A Succinyl-COA ligase [AD 98.3 1.4E-06 4.7E-11 85.5 7.5 117 112-243 8-127 (288)
148 1oi7_A Succinyl-COA synthetase 98.2 1.5E-06 5.2E-11 85.3 7.2 118 112-244 8-128 (288)
149 1x7d_A Ornithine cyclodeaminas 98.2 8.4E-07 2.9E-11 89.4 5.5 96 112-215 130-229 (350)
150 3uuw_A Putative oxidoreductase 98.2 2.1E-06 7.2E-11 83.4 8.2 86 112-209 7-94 (308)
151 3euw_A MYO-inositol dehydrogen 98.2 2.8E-06 9.7E-11 83.8 9.1 80 112-200 5-87 (344)
152 3e9m_A Oxidoreductase, GFO/IDH 98.2 4.3E-06 1.5E-10 82.4 9.3 80 112-199 6-88 (330)
153 4hkt_A Inositol 2-dehydrogenas 98.2 3.8E-06 1.3E-10 82.4 8.9 78 112-199 4-84 (331)
154 3q2i_A Dehydrogenase; rossmann 98.2 3.8E-06 1.3E-10 83.3 8.8 87 112-209 14-103 (354)
155 2g1u_A Hypothetical protein TM 98.2 6.1E-06 2.1E-10 72.3 9.1 102 104-213 13-120 (155)
156 3llv_A Exopolyphosphatase-rela 98.2 1.3E-05 4.3E-10 68.7 10.8 94 112-212 7-104 (141)
157 2d59_A Hypothetical protein PH 98.2 8.5E-06 2.9E-10 71.9 9.8 121 106-248 17-141 (144)
158 3ezy_A Dehydrogenase; structur 98.1 3.7E-06 1.3E-10 83.1 7.7 80 112-199 3-85 (344)
159 3mz0_A Inositol 2-dehydrogenas 98.1 5.4E-06 1.8E-10 81.9 8.6 86 112-209 3-94 (344)
160 3fwz_A Inner membrane protein 98.1 1.6E-05 5.4E-10 68.7 10.3 75 112-193 8-86 (140)
161 2glx_A 1,5-anhydro-D-fructose 98.1 8.9E-06 3E-10 79.4 9.1 86 112-209 1-90 (332)
162 3hdj_A Probable ornithine cycl 98.1 3.7E-06 1.3E-10 83.5 6.5 90 112-215 122-216 (313)
163 2ho3_A Oxidoreductase, GFO/IDH 98.1 6.8E-06 2.3E-10 80.4 8.2 87 111-208 1-89 (325)
164 1a5z_A L-lactate dehydrogenase 98.1 7.7E-06 2.6E-10 80.8 8.5 93 112-215 1-120 (319)
165 2vhw_A Alanine dehydrogenase; 98.1 5E-06 1.7E-10 84.2 7.2 99 106-212 164-268 (377)
166 3vtf_A UDP-glucose 6-dehydroge 98.1 0.00015 5.2E-09 75.4 18.4 197 111-336 21-261 (444)
167 1iuk_A Hypothetical protein TT 98.1 9.9E-06 3.4E-10 71.3 8.1 117 112-248 14-134 (140)
168 3db2_A Putative NADPH-dependen 98.1 6.6E-06 2.3E-10 81.6 7.9 86 112-209 6-94 (354)
169 3e18_A Oxidoreductase; dehydro 98.0 1.4E-05 4.9E-10 79.7 9.8 86 112-209 6-93 (359)
170 2hmt_A YUAA protein; RCK, KTN, 98.0 1.6E-05 5.3E-10 67.1 8.6 98 108-213 4-106 (144)
171 3c85_A Putative glutathione-re 98.0 3.7E-05 1.3E-09 68.7 11.3 93 106-205 35-132 (183)
172 3cea_A MYO-inositol 2-dehydrog 98.0 1.8E-05 6.1E-10 77.7 9.7 86 112-209 9-99 (346)
173 1tlt_A Putative oxidoreductase 98.0 1.8E-05 6.1E-10 77.2 9.6 85 112-208 6-92 (319)
174 4dio_A NAD(P) transhydrogenase 98.0 6E-06 2E-10 85.0 6.4 97 108-212 188-312 (405)
175 3ec7_A Putative dehydrogenase; 98.0 1.6E-05 5.3E-10 79.4 9.2 86 112-209 24-115 (357)
176 3evn_A Oxidoreductase, GFO/IDH 98.0 1.3E-05 4.4E-10 78.8 7.7 87 112-209 6-95 (329)
177 3ic5_A Putative saccharopine d 97.9 2.4E-05 8.1E-10 63.8 8.0 91 112-212 6-100 (118)
178 3qy9_A DHPR, dihydrodipicolina 97.9 2.9E-05 1E-09 74.6 9.9 151 111-286 3-162 (243)
179 1xea_A Oxidoreductase, GFO/IDH 97.9 1.7E-05 5.7E-10 77.7 8.3 79 112-198 3-83 (323)
180 3l4b_C TRKA K+ channel protien 97.9 3.2E-05 1.1E-09 71.3 9.7 94 112-211 1-99 (218)
181 3rc1_A Sugar 3-ketoreductase; 97.9 1.7E-05 5.8E-10 78.9 8.1 85 112-208 28-116 (350)
182 2ewd_A Lactate dehydrogenase,; 97.9 3E-05 1E-09 76.2 9.7 93 112-214 5-124 (317)
183 1omo_A Alanine dehydrogenase; 97.9 8.4E-06 2.9E-10 80.9 5.6 92 112-215 126-220 (322)
184 1lld_A L-lactate dehydrogenase 97.9 1.8E-05 6.2E-10 77.0 7.7 98 112-216 8-129 (319)
185 1ydw_A AX110P-like protein; st 97.9 4.2E-05 1.4E-09 76.0 10.0 90 112-209 7-99 (362)
186 2egg_A AROE, shikimate 5-dehyd 97.9 8.3E-06 2.9E-10 80.0 4.6 76 107-191 138-217 (297)
187 3u62_A Shikimate dehydrogenase 97.9 1.8E-06 6.1E-11 83.3 -0.4 90 108-211 107-199 (253)
188 3ohs_X Trans-1,2-dihydrobenzen 97.9 2.3E-05 7.7E-10 77.1 7.4 89 112-209 3-94 (334)
189 3c1a_A Putative oxidoreductase 97.8 1.3E-05 4.6E-10 78.1 5.4 84 112-208 11-96 (315)
190 1x13_A NAD(P) transhydrogenase 97.8 2.1E-05 7.1E-10 80.5 7.0 98 107-212 169-292 (401)
191 3fr7_A Putative ketol-acid red 97.8 2.4E-05 8.1E-10 82.5 7.1 86 310-400 394-481 (525)
192 1gpj_A Glutamyl-tRNA reductase 97.8 4.4E-05 1.5E-09 77.9 8.8 75 108-191 165-240 (404)
193 4had_A Probable oxidoreductase 97.8 4.4E-05 1.5E-09 75.2 8.3 85 107-199 19-107 (350)
194 3don_A Shikimate dehydrogenase 97.8 3.6E-06 1.2E-10 82.4 0.4 94 107-211 114-209 (277)
195 2v6b_A L-LDH, L-lactate dehydr 97.8 5.4E-05 1.9E-09 74.3 8.6 96 112-215 1-120 (304)
196 1l7d_A Nicotinamide nucleotide 97.7 4.6E-05 1.6E-09 77.1 7.9 98 107-212 169-294 (384)
197 4fb5_A Probable oxidoreductase 97.7 6E-05 2.1E-09 74.3 8.5 98 106-209 18-122 (393)
198 2p2s_A Putative oxidoreductase 97.7 0.00015 5.1E-09 71.2 10.7 84 112-208 5-93 (336)
199 3bio_A Oxidoreductase, GFO/IDH 97.7 0.00011 3.6E-09 72.2 9.5 86 112-211 10-95 (304)
200 2z2v_A Hypothetical protein PH 97.7 3.5E-05 1.2E-09 77.8 6.2 92 112-213 17-109 (365)
201 3dty_A Oxidoreductase, GFO/IDH 97.7 7E-05 2.4E-09 75.6 8.4 88 112-209 13-113 (398)
202 3moi_A Probable dehydrogenase; 97.7 5.8E-05 2E-09 76.0 7.3 86 112-209 3-92 (387)
203 2eez_A Alanine dehydrogenase; 97.7 6.9E-05 2.3E-09 75.4 7.5 99 106-212 162-266 (369)
204 2hjr_A Malate dehydrogenase; m 97.7 0.00021 7.1E-09 71.1 11.0 90 112-211 15-130 (328)
205 3v5n_A Oxidoreductase; structu 97.7 9.4E-05 3.2E-09 75.4 8.6 88 112-209 38-138 (417)
206 1guz_A Malate dehydrogenase; o 97.7 0.0002 6.9E-09 70.3 10.7 72 112-188 1-79 (310)
207 1f06_A MESO-diaminopimelate D- 97.7 3.5E-05 1.2E-09 76.1 5.3 84 112-211 4-88 (320)
208 1id1_A Putative potassium chan 97.6 0.00029 1E-08 61.3 10.1 96 112-213 4-107 (153)
209 3ond_A Adenosylhomocysteinase; 97.6 0.00012 4E-09 77.1 8.4 92 107-214 262-354 (488)
210 1pzg_A LDH, lactate dehydrogen 97.6 0.00026 8.8E-09 70.5 10.6 69 112-186 10-86 (331)
211 1h6d_A Precursor form of gluco 97.6 9.9E-05 3.4E-09 75.7 7.7 89 112-208 84-177 (433)
212 3o8q_A Shikimate 5-dehydrogena 97.6 1.9E-05 6.3E-10 77.4 2.1 78 107-192 123-201 (281)
213 4h3v_A Oxidoreductase domain p 97.6 0.00011 3.8E-09 72.4 7.3 90 113-209 8-103 (390)
214 2yv1_A Succinyl-COA ligase [AD 97.5 8.1E-05 2.8E-09 73.2 6.1 91 112-216 14-107 (294)
215 2aef_A Calcium-gated potassium 97.5 0.00023 7.8E-09 66.2 8.5 93 112-213 10-107 (234)
216 1leh_A Leucine dehydrogenase; 97.5 0.00012 4.2E-09 74.2 7.2 68 107-186 170-238 (364)
217 2yv2_A Succinyl-COA synthetase 97.5 0.00013 4.4E-09 71.9 6.8 91 112-216 14-108 (297)
218 1p77_A Shikimate 5-dehydrogena 97.5 3.5E-05 1.2E-09 74.4 2.6 78 107-192 116-194 (272)
219 3o9z_A Lipopolysaccaride biosy 97.5 0.00021 7E-09 70.2 8.2 86 111-209 3-100 (312)
220 4gqa_A NAD binding oxidoreduct 97.5 0.00017 5.9E-09 72.8 7.8 92 112-209 27-124 (412)
221 2czc_A Glyceraldehyde-3-phosph 97.5 0.00027 9.4E-09 70.3 9.1 94 112-213 3-111 (334)
222 1zh8_A Oxidoreductase; TM0312, 97.5 0.00021 7.2E-09 70.6 8.1 87 112-208 19-109 (340)
223 3pwz_A Shikimate dehydrogenase 97.5 7.7E-05 2.6E-09 72.6 4.7 92 107-211 117-214 (272)
224 3oa2_A WBPB; oxidoreductase, s 97.5 0.00023 8E-09 70.0 8.1 86 111-209 3-101 (318)
225 1ldn_A L-lactate dehydrogenase 97.5 0.00027 9.2E-09 69.8 8.5 70 112-189 7-85 (316)
226 1nyt_A Shikimate 5-dehydrogena 97.4 0.00011 3.6E-09 70.8 5.4 77 107-191 116-193 (271)
227 3m2t_A Probable dehydrogenase; 97.4 0.00019 6.7E-09 71.5 7.3 86 112-208 6-95 (359)
228 3i23_A Oxidoreductase, GFO/IDH 97.4 0.00025 8.6E-09 70.2 7.9 85 112-209 3-93 (349)
229 1t2d_A LDH-P, L-lactate dehydr 97.4 0.00052 1.8E-08 68.1 10.1 66 112-186 5-80 (322)
230 3e82_A Putative oxidoreductase 97.4 0.00044 1.5E-08 69.0 9.1 85 112-210 8-96 (364)
231 2ixa_A Alpha-N-acetylgalactosa 97.4 0.00053 1.8E-08 70.3 9.8 81 112-198 21-111 (444)
232 2vt3_A REX, redox-sensing tran 97.4 0.00025 8.6E-09 66.9 6.5 80 112-200 86-167 (215)
233 3f4l_A Putative oxidoreductase 97.3 0.00011 3.9E-09 72.5 4.4 86 112-210 3-94 (345)
234 3u3x_A Oxidoreductase; structu 97.3 0.00048 1.7E-08 68.7 9.0 86 112-209 27-116 (361)
235 3phh_A Shikimate dehydrogenase 97.3 0.00022 7.5E-09 69.6 6.1 67 110-190 118-184 (269)
236 3l9w_A Glutathione-regulated p 97.3 0.0009 3.1E-08 68.7 10.6 93 112-211 5-102 (413)
237 3kux_A Putative oxidoreductase 97.3 0.00042 1.4E-08 68.6 7.7 85 112-209 8-95 (352)
238 2nvw_A Galactose/lactose metab 97.3 0.00044 1.5E-08 72.1 8.1 82 112-198 40-128 (479)
239 3btv_A Galactose/lactose metab 97.3 0.0004 1.4E-08 71.3 7.5 82 112-198 21-109 (438)
240 1ur5_A Malate dehydrogenase; o 97.3 0.0015 5E-08 64.3 11.2 69 112-187 3-79 (309)
241 2i6t_A Ubiquitin-conjugating e 97.3 0.0013 4.5E-08 64.8 10.9 89 111-211 14-124 (303)
242 3gdo_A Uncharacterized oxidore 97.2 0.00049 1.7E-08 68.4 7.7 84 112-209 6-93 (358)
243 3fhl_A Putative oxidoreductase 97.2 0.00042 1.4E-08 68.9 7.1 84 112-209 6-93 (362)
244 3oqb_A Oxidoreductase; structu 97.2 0.00051 1.7E-08 68.6 7.2 86 112-209 7-111 (383)
245 1nvm_B Acetaldehyde dehydrogen 97.2 0.0013 4.5E-08 65.1 9.9 94 112-213 5-105 (312)
246 1oju_A MDH, malate dehydrogena 97.2 0.0015 5.3E-08 64.1 10.3 69 112-187 1-78 (294)
247 4f3y_A DHPR, dihydrodipicolina 97.2 0.0005 1.7E-08 67.1 6.5 160 112-286 8-185 (272)
248 3keo_A Redox-sensing transcrip 97.2 0.00028 9.4E-09 66.7 4.5 147 72-237 42-197 (212)
249 1y6j_A L-lactate dehydrogenase 97.1 0.0012 4.1E-08 65.3 9.2 93 112-211 8-122 (318)
250 3ip3_A Oxidoreductase, putativ 97.1 0.00065 2.2E-08 66.8 7.1 86 112-209 3-95 (337)
251 4gmf_A Yersiniabactin biosynth 97.1 0.00034 1.2E-08 70.9 5.0 91 112-214 8-103 (372)
252 3jyo_A Quinate/shikimate dehyd 97.1 0.00065 2.2E-08 66.4 6.5 77 107-190 124-206 (283)
253 3gvi_A Malate dehydrogenase; N 97.1 0.0023 7.9E-08 63.8 10.5 73 105-187 2-84 (324)
254 3ijp_A DHPR, dihydrodipicolina 97.0 0.0025 8.6E-08 62.7 10.3 161 112-287 22-201 (288)
255 1lc0_A Biliverdin reductase A; 97.0 0.00045 1.5E-08 67.1 4.8 83 112-208 8-92 (294)
256 1pjc_A Protein (L-alanine dehy 97.0 0.0007 2.4E-08 67.9 6.3 98 107-212 164-267 (361)
257 3abi_A Putative uncharacterize 97.0 0.001 3.5E-08 66.4 7.1 81 107-197 11-96 (365)
258 1edz_A 5,10-methylenetetrahydr 97.0 0.00033 1.1E-08 70.0 3.4 95 107-212 174-275 (320)
259 3fbt_A Chorismate mutase and s 97.0 0.00043 1.5E-08 67.9 4.0 71 107-190 119-190 (282)
260 3p7m_A Malate dehydrogenase; p 97.0 0.0036 1.2E-07 62.2 10.7 67 112-187 6-82 (321)
261 3d0o_A L-LDH 1, L-lactate dehy 97.0 0.0031 1.1E-07 62.2 10.2 71 112-188 7-84 (317)
262 4ew6_A D-galactose-1-dehydroge 97.0 0.0015 5.1E-08 64.4 7.9 80 112-209 26-109 (330)
263 3ngx_A Bifunctional protein fo 96.9 0.0014 4.7E-08 64.3 7.3 74 108-212 148-222 (276)
264 3pqe_A L-LDH, L-lactate dehydr 96.9 0.002 6.9E-08 64.2 8.7 70 112-187 6-82 (326)
265 3nep_X Malate dehydrogenase; h 96.9 0.0026 8.8E-08 63.1 9.2 68 112-188 1-79 (314)
266 1c1d_A L-phenylalanine dehydro 96.9 0.0016 5.5E-08 65.9 7.7 66 107-185 172-238 (355)
267 3fef_A Putative glucosidase LP 96.9 0.0012 4.2E-08 68.7 7.1 73 112-192 6-89 (450)
268 3ldh_A Lactate dehydrogenase; 96.9 0.0025 8.6E-08 63.8 8.9 69 112-187 22-98 (330)
269 2d4a_B Malate dehydrogenase; a 96.9 0.0027 9.2E-08 62.5 8.9 68 113-189 1-78 (308)
270 1ez4_A Lactate dehydrogenase; 96.9 0.0021 7.3E-08 63.6 8.0 72 112-189 6-83 (318)
271 1npy_A Hypothetical shikimate 96.8 0.0013 4.3E-08 64.0 6.1 70 109-191 118-188 (271)
272 1b7g_O Protein (glyceraldehyde 96.8 0.0052 1.8E-07 61.4 10.4 94 112-213 2-109 (340)
273 2zqz_A L-LDH, L-lactate dehydr 96.8 0.0035 1.2E-07 62.3 9.1 72 112-189 10-87 (326)
274 4a26_A Putative C-1-tetrahydro 96.8 0.0017 5.8E-08 64.4 6.6 76 106-212 161-239 (300)
275 1cf2_P Protein (glyceraldehyde 96.8 0.005 1.7E-07 61.5 9.9 96 111-214 1-111 (337)
276 1dih_A Dihydrodipicolinate red 96.8 0.0027 9.4E-08 61.6 7.7 160 112-286 6-184 (273)
277 2axq_A Saccharopine dehydrogen 96.7 0.0027 9.3E-08 66.2 8.1 85 106-196 19-106 (467)
278 3l07_A Bifunctional protein fo 96.7 0.0027 9.2E-08 62.5 7.5 76 106-212 157-233 (285)
279 3p2o_A Bifunctional protein fo 96.7 0.0029 9.7E-08 62.3 7.3 76 106-212 156-232 (285)
280 3tl2_A Malate dehydrogenase; c 96.7 0.0037 1.3E-07 62.0 8.2 69 112-186 9-86 (315)
281 3tnl_A Shikimate dehydrogenase 96.6 0.0032 1.1E-07 62.6 7.5 78 107-191 151-239 (315)
282 4ina_A Saccharopine dehydrogen 96.6 0.0026 8.9E-08 64.7 6.9 94 111-213 1-108 (405)
283 1ff9_A Saccharopine reductase; 96.6 0.0033 1.1E-07 65.0 7.6 78 112-195 4-85 (450)
284 3t4e_A Quinate/shikimate dehyd 96.6 0.0029 9.8E-08 62.8 6.7 77 107-190 145-232 (312)
285 2yyy_A Glyceraldehyde-3-phosph 96.6 0.011 3.8E-07 59.3 11.1 92 112-214 3-115 (343)
286 3do5_A HOM, homoserine dehydro 96.6 0.0054 1.8E-07 61.2 8.6 98 111-211 2-114 (327)
287 4a5o_A Bifunctional protein fo 96.6 0.004 1.4E-07 61.4 7.5 76 106-212 157-233 (286)
288 2xxj_A L-LDH, L-lactate dehydr 96.6 0.0036 1.2E-07 61.7 7.1 71 112-188 1-77 (310)
289 1mld_A Malate dehydrogenase; o 96.5 0.011 3.7E-07 58.3 10.2 68 112-187 1-77 (314)
290 1b0a_A Protein (fold bifunctio 96.4 0.0048 1.7E-07 60.8 7.0 76 106-212 155-231 (288)
291 2dt5_A AT-rich DNA-binding pro 96.4 0.00094 3.2E-08 62.8 1.8 81 112-200 81-162 (211)
292 1jw9_B Molybdopterin biosynthe 96.4 0.0079 2.7E-07 57.3 8.3 87 105-198 26-141 (249)
293 1nvt_A Shikimate 5'-dehydrogen 96.4 0.0019 6.6E-08 62.4 3.9 74 107-191 125-206 (287)
294 3upl_A Oxidoreductase; rossman 96.4 0.0069 2.3E-07 63.1 8.2 90 112-209 24-136 (446)
295 1a4i_A Methylenetetrahydrofola 96.4 0.0072 2.4E-07 59.9 7.8 76 106-212 161-237 (301)
296 4aj2_A L-lactate dehydrogenase 96.3 0.0088 3E-07 59.8 8.5 72 108-187 17-96 (331)
297 3vku_A L-LDH, L-lactate dehydr 96.3 0.0052 1.8E-07 61.4 6.5 70 112-187 10-85 (326)
298 3ff4_A Uncharacterized protein 96.2 0.0084 2.9E-07 51.6 6.5 109 111-243 4-116 (122)
299 3tum_A Shikimate dehydrogenase 96.1 0.004 1.4E-07 60.5 4.6 98 107-211 122-224 (269)
300 1j5p_A Aspartate dehydrogenase 96.1 0.0067 2.3E-07 58.7 5.8 80 112-213 13-93 (253)
301 4g65_A TRK system potassium up 96.0 0.0092 3.1E-07 61.9 7.1 74 112-192 4-82 (461)
302 2csu_A 457AA long hypothetical 96.0 0.004 1.4E-07 64.7 4.4 90 108-215 6-100 (457)
303 1vl6_A Malate oxidoreductase; 96.0 0.02 6.8E-07 58.6 9.2 90 107-209 189-291 (388)
304 3ius_A Uncharacterized conserv 95.9 0.035 1.2E-06 51.9 10.1 69 111-188 5-73 (286)
305 1ys4_A Aspartate-semialdehyde 95.9 0.021 7E-07 57.2 8.9 95 112-214 9-116 (354)
306 3fi9_A Malate dehydrogenase; s 95.9 0.017 5.7E-07 58.1 8.2 74 106-186 4-84 (343)
307 1obb_A Maltase, alpha-glucosid 95.9 0.026 8.8E-07 59.2 10.0 73 112-188 4-87 (480)
308 1lnq_A MTHK channels, potassiu 95.9 0.018 6.3E-07 56.2 8.3 91 112-211 116-211 (336)
309 3e8x_A Putative NAD-dependent 95.9 0.024 8.3E-07 51.8 8.4 75 105-188 16-94 (236)
310 3ing_A Homoserine dehydrogenas 95.8 0.021 7.2E-07 56.9 8.2 98 112-211 5-116 (325)
311 2c2x_A Methylenetetrahydrofola 95.8 0.015 5.2E-07 57.1 7.0 77 107-212 155-232 (281)
312 2ozp_A N-acetyl-gamma-glutamyl 95.6 0.022 7.6E-07 56.9 7.8 93 112-213 5-100 (345)
313 3dfz_A SIRC, precorrin-2 dehyd 95.6 0.03 1E-06 53.0 8.2 89 100-198 22-111 (223)
314 1p9l_A Dihydrodipicolinate red 95.6 0.034 1.2E-06 53.2 8.7 144 112-285 1-156 (245)
315 1xyg_A Putative N-acetyl-gamma 95.6 0.024 8.2E-07 57.0 7.8 91 112-213 17-113 (359)
316 3mtj_A Homoserine dehydrogenas 95.6 0.039 1.3E-06 57.3 9.5 91 113-211 12-109 (444)
317 1smk_A Malate dehydrogenase, g 95.5 0.063 2.2E-06 53.0 10.2 68 112-187 9-85 (326)
318 3eag_A UDP-N-acetylmuramate:L- 95.4 0.041 1.4E-06 54.1 8.7 67 111-185 4-73 (326)
319 3ew7_A LMO0794 protein; Q8Y8U8 95.3 0.058 2E-06 48.1 8.7 69 112-188 1-71 (221)
320 2dvm_A Malic enzyme, 439AA lon 95.3 0.033 1.1E-06 57.8 8.0 92 107-211 183-295 (439)
321 3dr3_A N-acetyl-gamma-glutamyl 95.3 0.054 1.8E-06 54.2 9.3 93 111-213 4-107 (337)
322 2x0j_A Malate dehydrogenase; o 95.3 0.023 8E-07 55.9 6.4 69 112-186 1-77 (294)
323 1u8f_O GAPDH, glyceraldehyde-3 95.3 0.07 2.4E-06 53.2 9.9 93 112-213 4-124 (335)
324 1ebf_A Homoserine dehydrogenas 95.1 0.016 5.6E-07 58.3 4.8 22 112-133 5-26 (358)
325 1zud_1 Adenylyltransferase THI 95.1 0.06 2.1E-06 51.2 8.4 87 105-198 23-138 (251)
326 3r6d_A NAD-dependent epimerase 94.9 0.072 2.5E-06 48.1 8.1 72 112-189 6-84 (221)
327 1s6y_A 6-phospho-beta-glucosid 94.9 0.081 2.8E-06 54.9 9.5 74 112-189 8-94 (450)
328 3lk7_A UDP-N-acetylmuramoylala 94.9 0.043 1.5E-06 56.4 7.3 70 107-185 6-79 (451)
329 2ep5_A 350AA long hypothetical 94.9 0.063 2.1E-06 53.6 8.3 93 112-213 5-109 (350)
330 1duv_G Octase-1, ornithine tra 94.9 0.13 4.6E-06 51.5 10.6 72 107-187 152-233 (333)
331 1u8x_X Maltose-6'-phosphate gl 94.8 0.13 4.4E-06 53.7 10.7 77 112-190 29-114 (472)
332 1o6z_A MDH, malate dehydrogena 94.8 0.077 2.6E-06 51.8 8.5 66 112-187 1-79 (303)
333 1dxh_A Ornithine carbamoyltran 94.8 0.14 4.8E-06 51.4 10.4 70 107-187 152-233 (335)
334 1p3d_A UDP-N-acetylmuramate--a 94.7 0.073 2.5E-06 54.9 8.3 68 109-185 16-84 (475)
335 1lu9_A Methylene tetrahydromet 94.6 0.04 1.4E-06 52.9 5.9 74 108-188 117-198 (287)
336 1pvv_A Otcase, ornithine carba 94.6 0.18 6.3E-06 50.1 10.8 71 107-186 152-231 (315)
337 3qvo_A NMRA family protein; st 94.6 0.046 1.6E-06 50.2 6.1 95 111-212 23-125 (236)
338 1b8p_A Protein (malate dehydro 94.5 0.091 3.1E-06 51.8 8.2 69 112-187 6-92 (329)
339 1qyc_A Phenylcoumaran benzylic 94.4 0.1 3.6E-06 49.1 8.2 82 111-198 4-100 (308)
340 4hv4_A UDP-N-acetylmuramate--L 94.4 0.079 2.7E-06 55.2 8.0 69 111-188 22-93 (494)
341 3c8m_A Homoserine dehydrogenas 94.1 0.091 3.1E-06 52.1 7.4 93 112-210 7-119 (331)
342 3ip1_A Alcohol dehydrogenase, 94.1 0.35 1.2E-05 48.4 11.8 95 109-211 213-317 (404)
343 1p0f_A NADP-dependent alcohol 94.1 0.34 1.2E-05 47.8 11.4 91 109-210 191-291 (373)
344 2w37_A Ornithine carbamoyltran 94.1 0.21 7.3E-06 50.5 10.0 70 107-187 173-254 (359)
345 2r6j_A Eugenol synthase 1; phe 94.0 0.15 5.3E-06 48.4 8.5 81 112-198 12-102 (318)
346 3dqp_A Oxidoreductase YLBE; al 94.0 0.14 4.9E-06 46.0 7.8 69 112-189 1-74 (219)
347 1y1p_A ARII, aldehyde reductas 93.9 0.28 9.5E-06 46.6 10.0 75 106-187 7-92 (342)
348 4gx0_A TRKA domain protein; me 93.8 0.092 3.1E-06 55.0 7.1 89 112-209 349-440 (565)
349 2ejw_A HDH, homoserine dehydro 93.8 0.058 2E-06 53.9 5.3 89 112-210 4-96 (332)
350 3h2s_A Putative NADH-flavin re 93.8 0.28 9.5E-06 43.8 9.4 70 112-188 1-72 (224)
351 2gas_A Isoflavone reductase; N 93.8 0.17 6E-06 47.5 8.3 81 112-198 3-99 (307)
352 2d8a_A PH0655, probable L-thre 93.8 0.13 4.4E-06 50.3 7.7 92 109-211 167-266 (348)
353 1e3i_A Alcohol dehydrogenase, 93.7 0.42 1.5E-05 47.1 11.3 91 109-210 195-295 (376)
354 2nqt_A N-acetyl-gamma-glutamyl 93.7 0.065 2.2E-06 53.9 5.4 88 112-213 10-111 (352)
355 3hhp_A Malate dehydrogenase; M 93.6 0.19 6.5E-06 49.6 8.6 71 112-187 1-78 (312)
356 2i6u_A Otcase, ornithine carba 93.6 0.15 5.1E-06 50.6 7.8 69 107-186 145-225 (307)
357 1vlv_A Otcase, ornithine carba 93.6 0.15 5.1E-06 51.0 7.7 72 107-187 164-245 (325)
358 1cdo_A Alcohol dehydrogenase; 93.6 0.43 1.5E-05 47.1 11.1 91 109-210 192-292 (374)
359 4a2c_A Galactitol-1-phosphate 93.6 0.38 1.3E-05 46.6 10.5 94 108-211 159-259 (346)
360 1hdo_A Biliverdin IX beta redu 93.5 0.22 7.4E-06 43.6 7.9 70 112-188 4-77 (206)
361 4b4u_A Bifunctional protein fo 93.5 0.16 5.5E-06 50.3 7.7 77 107-215 176-253 (303)
362 2f00_A UDP-N-acetylmuramate--L 93.5 0.17 5.8E-06 52.4 8.3 68 109-185 17-85 (491)
363 2cdc_A Glucose dehydrogenase g 93.4 0.097 3.3E-06 51.7 6.1 93 107-211 178-277 (366)
364 3e5r_O PP38, glyceraldehyde-3- 93.4 0.23 7.8E-06 49.6 8.8 92 112-211 4-125 (337)
365 3tpf_A Otcase, ornithine carba 93.4 0.27 9.1E-06 48.7 9.2 71 107-186 142-222 (307)
366 3c1o_A Eugenol synthase; pheny 93.4 0.22 7.7E-06 47.3 8.4 82 111-198 4-100 (321)
367 3two_A Mannitol dehydrogenase; 93.4 0.11 3.7E-06 50.9 6.3 89 109-211 176-264 (348)
368 2jhf_A Alcohol dehydrogenase E 93.4 0.41 1.4E-05 47.2 10.6 91 109-210 191-291 (374)
369 3i6i_A Putative leucoanthocyan 93.4 0.19 6.7E-06 48.5 8.1 81 112-198 11-106 (346)
370 4ej6_A Putative zinc-binding d 93.3 0.21 7.3E-06 49.5 8.5 92 109-211 182-283 (370)
371 3fpf_A Mtnas, putative unchara 93.3 0.27 9.2E-06 48.5 9.0 96 106-209 119-219 (298)
372 3h8v_A Ubiquitin-like modifier 93.2 0.27 9.2E-06 48.3 8.8 44 98-148 24-68 (292)
373 2fzw_A Alcohol dehydrogenase c 93.2 0.44 1.5E-05 46.9 10.5 91 109-210 190-290 (373)
374 4f2g_A Otcase 1, ornithine car 93.2 0.11 3.7E-06 51.6 6.0 69 107-186 151-224 (309)
375 4h7p_A Malate dehydrogenase; s 93.1 0.42 1.4E-05 47.9 10.2 81 104-186 18-108 (345)
376 3uko_A Alcohol dehydrogenase c 93.1 0.36 1.2E-05 47.8 9.7 92 109-211 193-294 (378)
377 1f8f_A Benzyl alcohol dehydrog 93.1 0.19 6.6E-06 49.5 7.7 92 109-211 190-288 (371)
378 1oth_A Protein (ornithine tran 93.1 0.24 8.3E-06 49.3 8.3 69 107-186 152-231 (321)
379 3gd5_A Otcase, ornithine carba 93.0 0.23 7.9E-06 49.6 8.0 71 107-186 154-233 (323)
380 3dhn_A NAD-dependent epimerase 93.0 0.098 3.3E-06 47.1 4.9 71 111-189 4-78 (227)
381 3s2e_A Zinc-containing alcohol 92.9 0.28 9.5E-06 47.7 8.4 92 109-211 166-262 (340)
382 1vkn_A N-acetyl-gamma-glutamyl 92.8 0.17 5.7E-06 51.0 6.8 90 111-213 13-108 (351)
383 2wm3_A NMRA-like family domain 92.8 0.36 1.2E-05 45.4 8.8 71 112-188 6-82 (299)
384 1e3j_A NADP(H)-dependent ketos 92.7 0.54 1.8E-05 45.9 10.3 92 109-211 168-270 (352)
385 4ep1_A Otcase, ornithine carba 92.7 0.25 8.5E-06 49.7 7.9 71 107-186 176-255 (340)
386 1pqw_A Polyketide synthase; ro 92.7 0.27 9.4E-06 43.7 7.5 92 109-212 38-137 (198)
387 1qyd_A Pinoresinol-lariciresin 92.7 0.25 8.7E-06 46.5 7.6 73 111-189 4-87 (313)
388 2dph_A Formaldehyde dismutase; 92.6 0.13 4.4E-06 51.5 5.7 94 109-210 185-297 (398)
389 3ruf_A WBGU; rossmann fold, UD 92.6 0.36 1.2E-05 46.3 8.7 74 107-187 22-109 (351)
390 1ml4_A Aspartate transcarbamoy 92.6 0.17 5.7E-06 50.2 6.3 72 107-187 152-230 (308)
391 1kol_A Formaldehyde dehydrogen 92.6 0.21 7.3E-06 49.7 7.2 95 109-211 185-299 (398)
392 1pjq_A CYSG, siroheme synthase 92.5 0.49 1.7E-05 48.8 10.1 87 101-197 4-92 (457)
393 1pl8_A Human sorbitol dehydrog 92.5 0.49 1.7E-05 46.4 9.7 92 109-211 171-272 (356)
394 3uog_A Alcohol dehydrogenase; 92.5 0.17 5.7E-06 50.0 6.2 91 109-211 189-286 (363)
395 3e05_A Precorrin-6Y C5,15-meth 92.4 0.57 1.9E-05 41.6 9.2 90 109-211 40-141 (204)
396 3slg_A PBGP3 protein; structur 92.4 0.16 5.5E-06 49.3 5.9 80 101-186 15-99 (372)
397 3gg2_A Sugar dehydrogenase, UD 92.3 0.37 1.3E-05 49.7 8.9 94 107-214 315-421 (450)
398 4g65_A TRK system potassium up 92.3 0.68 2.3E-05 47.8 10.8 96 112-214 236-336 (461)
399 3gaz_A Alcohol dehydrogenase s 92.3 0.28 9.6E-06 47.9 7.6 90 109-212 150-246 (343)
400 3hn7_A UDP-N-acetylmuramate-L- 92.1 0.35 1.2E-05 50.7 8.5 75 105-188 14-92 (524)
401 4amu_A Ornithine carbamoyltran 92.1 0.32 1.1E-05 49.4 7.8 70 107-185 177-258 (365)
402 3d6n_B Aspartate carbamoyltran 92.1 0.15 5.1E-06 50.2 5.2 69 107-188 143-214 (291)
403 2fk8_A Methoxy mycolic acid sy 92.0 0.77 2.6E-05 43.8 10.2 93 109-210 90-192 (318)
404 3grf_A Ornithine carbamoyltran 92.0 0.35 1.2E-05 48.3 7.9 70 107-185 158-241 (328)
405 2o7s_A DHQ-SDH PR, bifunctiona 91.8 0.16 5.4E-06 53.3 5.5 48 107-161 361-408 (523)
406 1rjw_A ADH-HT, alcohol dehydro 91.8 0.33 1.1E-05 47.3 7.5 91 109-210 164-259 (339)
407 2h1q_A Hypothetical protein; Z 91.8 0.36 1.2E-05 47.0 7.5 83 99-205 130-212 (270)
408 1sb8_A WBPP; epimerase, 4-epim 91.8 0.51 1.7E-05 45.5 8.7 74 107-187 24-111 (352)
409 4a0s_A Octenoyl-COA reductase/ 91.7 0.56 1.9E-05 47.5 9.2 87 109-211 220-335 (447)
410 3q2o_A Phosphoribosylaminoimid 91.6 0.16 5.4E-06 50.6 4.9 68 107-185 11-82 (389)
411 7mdh_A Protein (malate dehydro 91.6 1.1 3.7E-05 45.6 11.1 69 112-186 33-116 (375)
412 1t4b_A Aspartate-semialdehyde 91.6 0.29 9.8E-06 49.4 6.9 91 111-213 1-99 (367)
413 2hcy_A Alcohol dehydrogenase 1 91.6 0.51 1.7E-05 46.0 8.5 92 109-211 169-268 (347)
414 3fbg_A Putative arginate lyase 91.6 0.42 1.4E-05 46.7 7.9 93 109-212 150-248 (346)
415 1iz0_A Quinone oxidoreductase; 91.5 0.18 6.2E-06 48.2 5.1 90 109-211 125-217 (302)
416 2ph5_A Homospermidine synthase 91.5 0.24 8.4E-06 51.9 6.4 81 112-198 14-103 (480)
417 3qwb_A Probable quinone oxidor 91.5 0.3 1E-05 47.4 6.7 91 109-211 148-246 (334)
418 4a7p_A UDP-glucose dehydrogena 91.5 0.38 1.3E-05 49.7 7.9 93 107-214 319-424 (446)
419 4b7c_A Probable oxidoreductase 91.5 0.32 1.1E-05 47.1 6.9 92 109-212 149-248 (336)
420 4eye_A Probable oxidoreductase 91.4 0.26 9E-06 48.1 6.2 90 109-211 159-256 (342)
421 4ffl_A PYLC; amino acid, biosy 91.4 0.21 7.2E-06 48.9 5.6 32 111-148 1-32 (363)
422 4dpk_A Malonyl-COA/succinyl-CO 91.4 0.47 1.6E-05 47.7 8.2 90 112-213 8-111 (359)
423 4dpl_A Malonyl-COA/succinyl-CO 91.4 0.47 1.6E-05 47.7 8.2 90 112-213 8-111 (359)
424 3fpc_A NADP-dependent alcohol 91.4 0.21 7.2E-06 48.9 5.5 92 109-211 166-265 (352)
425 3gms_A Putative NADPH:quinone 91.3 0.43 1.5E-05 46.4 7.7 91 109-211 144-242 (340)
426 4fs3_A Enoyl-[acyl-carrier-pro 91.3 0.52 1.8E-05 44.2 8.0 38 107-151 3-43 (256)
427 3gpi_A NAD-dependent epimerase 91.3 0.085 2.9E-06 49.4 2.5 66 112-188 4-73 (286)
428 3r7f_A Aspartate carbamoyltran 91.3 0.35 1.2E-05 47.8 7.0 65 107-186 144-211 (304)
429 2c0c_A Zinc binding alcohol de 91.3 0.49 1.7E-05 46.6 8.1 92 109-212 163-261 (362)
430 1yqd_A Sinapyl alcohol dehydro 91.3 0.21 7.1E-06 49.5 5.3 87 109-209 187-279 (366)
431 1gtm_A Glutamate dehydrogenase 91.2 0.2 6.7E-06 51.6 5.3 35 108-149 210-245 (419)
432 3jyn_A Quinone oxidoreductase; 91.1 0.36 1.2E-05 46.6 6.9 91 109-211 140-238 (325)
433 4id9_A Short-chain dehydrogena 91.1 0.38 1.3E-05 46.1 6.9 68 106-187 15-86 (347)
434 1kyq_A Met8P, siroheme biosynt 91.1 0.29 9.9E-06 47.6 6.0 36 106-148 9-44 (274)
435 1v3u_A Leukotriene B4 12- hydr 91.1 0.54 1.9E-05 45.4 8.1 91 109-211 145-243 (333)
436 3m2p_A UDP-N-acetylglucosamine 91.1 0.26 8.8E-06 46.7 5.6 66 112-187 3-71 (311)
437 1piw_A Hypothetical zinc-type 91.0 0.24 8.2E-06 48.7 5.5 92 109-211 179-275 (360)
438 3sds_A Ornithine carbamoyltran 91.0 0.51 1.7E-05 47.6 7.9 68 108-186 186-266 (353)
439 3tqh_A Quinone oxidoreductase; 91.0 0.29 1E-05 47.2 6.0 91 108-211 151-244 (321)
440 2ef0_A Ornithine carbamoyltran 90.9 0.57 1.9E-05 46.3 8.1 70 107-187 151-222 (301)
441 3cps_A Glyceraldehyde 3-phosph 90.8 0.69 2.4E-05 46.6 8.7 99 106-213 12-139 (354)
442 1uuf_A YAHK, zinc-type alcohol 90.8 0.24 8.2E-06 49.2 5.3 90 109-211 194-287 (369)
443 2r00_A Aspartate-semialdehyde 90.7 0.26 9E-06 48.9 5.5 89 112-213 4-97 (336)
444 2pzm_A Putative nucleotide sug 90.6 0.26 8.9E-06 47.3 5.2 77 104-187 14-97 (330)
445 2bka_A CC3, TAT-interacting pr 90.6 0.3 1E-05 44.3 5.4 73 108-188 16-94 (242)
446 4dup_A Quinone oxidoreductase; 90.6 0.44 1.5E-05 46.7 7.0 91 109-211 167-264 (353)
447 2yfk_A Aspartate/ornithine car 90.6 0.53 1.8E-05 48.6 7.7 69 107-186 185-271 (418)
448 3g79_A NDP-N-acetyl-D-galactos 90.4 0.61 2.1E-05 48.7 8.2 91 107-214 350-452 (478)
449 3gqv_A Enoyl reductase; medium 90.4 1.9 6.5E-05 42.5 11.5 93 108-212 163-263 (371)
450 2q3e_A UDP-glucose 6-dehydroge 90.4 0.87 3E-05 46.9 9.3 96 107-214 326-445 (467)
451 3hsk_A Aspartate-semialdehyde 90.3 0.66 2.3E-05 47.1 8.1 91 112-213 20-125 (381)
452 4gx0_A TRKA domain protein; me 90.3 0.97 3.3E-05 47.2 9.6 91 112-211 128-224 (565)
453 4dvj_A Putative zinc-dependent 90.2 1 3.5E-05 44.4 9.3 92 109-211 171-269 (363)
454 2q1s_A Putative nucleotide sug 90.2 0.32 1.1E-05 47.6 5.6 76 106-188 28-109 (377)
455 3nkl_A UDP-D-quinovosamine 4-d 90.1 0.54 1.8E-05 39.5 6.2 92 112-214 5-101 (141)
456 3o38_A Short chain dehydrogena 90.1 0.38 1.3E-05 44.7 5.8 39 106-151 18-58 (266)
457 3oh8_A Nucleoside-diphosphate 90.1 1.3 4.6E-05 45.6 10.5 63 112-188 148-211 (516)
458 1orr_A CDP-tyvelose-2-epimeras 90.1 1.3 4.4E-05 42.0 9.6 71 111-187 1-82 (347)
459 3csu_A Protein (aspartate carb 90.1 0.68 2.3E-05 45.9 7.8 73 106-186 150-229 (310)
460 1xgk_A Nitrogen metabolite rep 90.0 1.3 4.5E-05 43.3 9.9 71 112-188 6-83 (352)
461 1kpg_A CFA synthase;, cyclopro 90.0 1.5 5.2E-05 40.9 9.9 89 109-210 64-166 (287)
462 1y7t_A Malate dehydrogenase; N 89.8 0.35 1.2E-05 47.2 5.5 68 112-186 5-88 (327)
463 1y8q_A Ubiquitin-like 1 activa 89.8 1.4 4.9E-05 43.7 10.0 88 105-199 31-146 (346)
464 2hjs_A USG-1 protein homolog; 89.7 0.23 8E-06 49.4 4.2 87 112-213 7-100 (340)
465 2b5w_A Glucose dehydrogenase; 89.7 0.63 2.2E-05 45.6 7.3 93 108-211 171-272 (357)
466 2nxc_A L11 mtase, ribosomal pr 89.6 0.84 2.9E-05 42.7 7.8 92 109-211 120-217 (254)
467 3q98_A Transcarbamylase; rossm 89.6 0.74 2.5E-05 47.2 7.8 72 106-186 187-274 (399)
468 2x5o_A UDP-N-acetylmuramoylala 89.5 0.23 7.7E-06 50.7 4.0 69 108-186 3-72 (439)
469 3jv7_A ADH-A; dehydrogenase, n 89.5 0.76 2.6E-05 44.6 7.6 92 109-211 171-269 (345)
470 3hnr_A Probable methyltransfer 89.5 2 6.7E-05 38.2 9.8 92 109-211 45-144 (220)
471 2o3j_A UDP-glucose 6-dehydroge 89.5 1.1 3.6E-05 46.6 9.1 97 107-214 332-449 (481)
472 3orq_A N5-carboxyaminoimidazol 89.4 0.21 7.3E-06 49.7 3.6 34 108-148 10-43 (377)
473 1qor_A Quinone oxidoreductase; 89.3 0.57 2E-05 45.1 6.5 91 109-211 140-238 (327)
474 3rui_A Ubiquitin-like modifier 89.2 1 3.5E-05 45.2 8.3 36 105-147 29-65 (340)
475 3njr_A Precorrin-6Y methylase; 89.2 1.6 5.4E-05 39.3 9.0 91 109-211 55-153 (204)
476 3hm2_A Precorrin-6Y C5,15-meth 89.1 1.5 5E-05 37.4 8.3 94 109-211 25-126 (178)
477 3m6i_A L-arabinitol 4-dehydrog 89.1 1.7 5.7E-05 42.5 9.8 92 109-211 179-282 (363)
478 1yb1_A 17-beta-hydroxysteroid 89.0 1.8 6.2E-05 40.4 9.6 44 99-149 20-64 (272)
479 4a8t_A Putrescine carbamoyltra 88.9 0.64 2.2E-05 46.6 6.6 70 107-186 172-250 (339)
480 3h5n_A MCCB protein; ubiquitin 88.8 0.88 3E-05 45.4 7.7 37 105-148 113-150 (353)
481 1vm6_A DHPR, dihydrodipicolina 88.8 1.4 4.7E-05 41.9 8.6 134 112-281 13-159 (228)
482 3goh_A Alcohol dehydrogenase, 88.8 0.42 1.4E-05 45.9 5.1 87 109-211 142-228 (315)
483 3u95_A Glycoside hydrolase, fa 88.8 0.61 2.1E-05 48.6 6.7 74 112-186 1-84 (477)
484 1wly_A CAAR, 2-haloacrylate re 88.7 0.73 2.5E-05 44.6 6.8 91 109-211 145-243 (333)
485 1zsy_A Mitochondrial 2-enoyl t 88.6 2 6.7E-05 42.1 9.9 89 109-212 167-270 (357)
486 2j3h_A NADP-dependent oxidored 88.6 0.68 2.3E-05 44.8 6.5 91 109-211 155-254 (345)
487 3e48_A Putative nucleoside-dip 88.6 1.2 4.1E-05 41.5 8.0 71 112-188 1-75 (289)
488 1l3i_A Precorrin-6Y methyltran 88.6 0.98 3.4E-05 38.7 6.9 91 108-211 32-133 (192)
489 1vj0_A Alcohol dehydrogenase, 88.6 0.77 2.6E-05 45.5 7.0 91 109-210 195-296 (380)
490 4hb9_A Similarities with proba 88.5 0.41 1.4E-05 46.3 4.8 32 112-149 2-33 (412)
491 2a9f_A Putative malic enzyme ( 88.4 0.91 3.1E-05 46.5 7.5 92 107-211 185-288 (398)
492 2vn8_A Reticulon-4-interacting 88.3 2.7 9.2E-05 41.3 10.7 93 109-212 183-280 (375)
493 3l5o_A Uncharacterized protein 88.3 1 3.4E-05 43.9 7.4 86 98-207 129-214 (270)
494 4a8p_A Putrescine carbamoyltra 88.2 0.74 2.5E-05 46.5 6.6 69 107-185 150-227 (355)
495 3kkj_A Amine oxidase, flavin-c 88.1 0.42 1.4E-05 41.2 4.2 31 113-149 4-34 (336)
496 1yb5_A Quinone oxidoreductase; 88.0 1.2 4.2E-05 43.6 8.0 90 109-210 170-267 (351)
497 3i1j_A Oxidoreductase, short c 88.0 3.1 0.0001 37.8 10.2 44 101-151 5-49 (247)
498 4e4t_A Phosphoribosylaminoimid 87.9 0.63 2.1E-05 47.3 6.0 68 107-184 32-102 (419)
499 3pwk_A Aspartate-semialdehyde 87.9 0.31 1.1E-05 49.3 3.7 87 112-213 3-96 (366)
500 3vh1_A Ubiquitin-like modifier 87.9 0.78 2.7E-05 49.4 6.9 35 105-146 322-357 (598)
No 1
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=100.00 E-value=5.8e-89 Score=711.84 Aligned_cols=365 Identities=85% Similarity=1.302 Sum_probs=346.6
Q ss_pred CccccccccchhhhhhhhcccccchhhccCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEe
Q 013877 68 TPFLLDFETSVFKKDMISLADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGL 147 (434)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~ 147 (434)
.+++++|||++|.+++++|+|+.|+||+||||.|++++++|+|++||||||+|+||++||++|+++++++++|++|++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~g~~E~v~~~~~w~~~~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~ 90 (525)
T 3fr7_A 11 AMPSLDFDTSVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGL 90 (525)
T ss_dssp ----CCCCCSSSCEEEEEETTEEEEEEECCGGGGGGHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred cccccccccccceeeEeecCCcceEEEeccccccccChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEe
Confidence 45779999999999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred cCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCC
Q 013877 148 RKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFP 227 (434)
Q Consensus 148 r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~ 227 (434)
+.++++++.|++.|+...++++.++.|++++||+||+++||..+.+++++|+|+|++|++|+++|||+++++++.++.+|
T Consensus 91 r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaVP~~~~~eVl~eI~p~LK~GaILs~AaGf~I~~le~~~i~~p 170 (525)
T 3fr7_A 91 RKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFP 170 (525)
T ss_dssp CTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEESSSHHHHHHHHTTCCCC
T ss_pred CCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECCChHHHHHHHHHHHHhcCCCCeEEEeCCCCHHHHhhhcccCC
Confidence 98888999999999984233446899999999999999999999999999999999999999999999998876678899
Q ss_pred CCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchh
Q 013877 228 KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG 307 (434)
Q Consensus 228 ~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~t 307 (434)
++++|||+|||+|+++||++|++|+++||+|+|++|+++||+|+++++++++|+.++|++++++|+|++|+++|+||+|+
T Consensus 171 ~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqt 250 (525)
T 3fr7_A 171 KNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERG 250 (525)
T ss_dssp TTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHT
T ss_pred CCCcEEEEecCCCchhHHHHHhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCCcchhhhhhhhhccchhHHHHHHH
Q 013877 308 ILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYE 387 (434)
Q Consensus 308 vL~G~~~aliea~~~~~v~~Gl~~e~A~~~~~e~l~Gli~~li~e~G~~~m~~~vssp~~~eyg~~~~~~~~p~~~~m~e 387 (434)
+|||++|++++++||++|++||+||+||++++|+++|+|++||+++|+.+|+++||+|++++||++|...+.|+|++|+|
T Consensus 251 vLsG~~pAlieA~~d~lVe~G~~pe~Ay~~~~qel~~~i~~li~e~G~~~m~~~~S~ta~~~~~~~~~~~~~~~~~~m~~ 330 (525)
T 3fr7_A 251 ILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYE 330 (525)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTHHHHHHHHHCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCcHHHHHHHHHhccchHHHHHHHHH
Confidence 99999999999999999999999999999999999966999999999999999999998899999988888999999999
Q ss_pred HHHhccCChhHHHHHHhcCccchhcCCCCCcccccccccccccCC
Q 013877 388 CYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRIPINTS 432 (434)
Q Consensus 388 ~~~~v~~G~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 432 (434)
+|++||+|+|+|+||++|+|++||++|++|||++||+++|||+|.
T Consensus 331 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 375 (525)
T 3fr7_A 331 CYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGE 375 (525)
T ss_dssp HHHHHHHSHHHHHHHHHHHTTSCBTTBCCCCCCCSTTSHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHhcCccchhccccccchhhhcccHHHHHHH
Confidence 999999999999999999999999999999999999999999874
No 2
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=100.00 E-value=1.5e-74 Score=594.81 Aligned_cols=305 Identities=26% Similarity=0.406 Sum_probs=285.2
Q ss_pred ccccccchhhhhhhh-----cccccchhhccCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE
Q 013877 71 LLDFETSVFKKDMIS-----LADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV 145 (434)
Q Consensus 71 ~~~~~~~~~~~~~~~-----~~~~~e~~~~~~~~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Viv 145 (434)
.|||||++||+|+.+ ||+++| |.++++.||| |||+|||||+||++||+||||| |++|+|
T Consensus 2 ~ny~n~l~~~~~~~~~~~c~~m~~~e---------F~~~~~~lkg-K~IaVIGyGsQG~AqAlNLRDS------Gv~V~V 65 (491)
T 3ulk_A 2 ANYFNTLNLRQQLAQLGKCRFMGRDE---------FADGASYLQG-KKVVIVGCGAQGLNQGLNMRDS------GLDISY 65 (491)
T ss_dssp CCTGGGSCHHHHHHHHTCCEECCGGG---------GTTTTGGGTT-SEEEEESCSHHHHHHHHHHHHT------TCEEEE
T ss_pred cchhccccHHHHHHHhccceeccHHH---------hcchhHHHcC-CEEEEeCCChHhHHHHhHHHhc------CCcEEE
Confidence 499999999999987 888888 9999999999 9999999999999999999999 999999
Q ss_pred EecCCc-----hhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEeccchhhhhh
Q 013877 146 GLRKGS-----RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQ 220 (434)
Q Consensus 146 g~r~~~-----~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~ 220 (434)
|+|+++ +||++|+++||. +.+++|++++||+|++++||..|.++|++|.|+||+|++|.++|||++++.
T Consensus 66 glr~~s~~e~~~S~~~A~~~Gf~-----v~~~~eA~~~ADvV~~L~PD~~q~~vy~~I~p~lk~G~~L~faHGFnI~~~- 139 (491)
T 3ulk_A 66 ALRKEAIAEKRASWRKATENGFK-----VGTYEELIPQADLVINLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEV- 139 (491)
T ss_dssp EECHHHHHTTCHHHHHHHHTTCE-----EEEHHHHGGGCSEEEECSCGGGHHHHHHHHGGGSCTTCEEEESSCHHHHTT-
T ss_pred EeCCCCcccccchHHHHHHCCCE-----ecCHHHHHHhCCEEEEeCChhhHHHHHHHHHhhCCCCCEEEecCccccccc-
Confidence 999544 899999999999 578999999999999999999999999999999999999999999999874
Q ss_pred cccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeec--CCCCHHHHHHHHHHHHHhCCCc--ccccchhh
Q 013877 221 SMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH--QDVDGRATNVALGWSVALGSPF--TFATTLEQ 296 (434)
Q Consensus 221 ~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~--qdvsg~a~e~a~~la~aiG~~~--~iettf~~ 296 (434)
++.||+|+|||||+||+||+.||++|++| +|+|++|||| ||+||+++++|++|+.++|++| +++|||++
T Consensus 140 --~i~pp~dvdVimVAPKgpG~~VR~~y~~G-----~GvP~liAVhqeqD~sG~a~~~AlayA~aiG~~raGvieTTF~e 212 (491)
T 3ulk_A 140 --GEQIRKDITVVMVAPKCPGTEVREEYKRG-----FGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVA 212 (491)
T ss_dssp --CCCCCTTSEEEEEEESSCHHHHHHHHHTT-----CCCCEEEEECGGGCTTSCHHHHHHHHHHHHTGGGTCEEECCHHH
T ss_pred --ccccCCCcceEEeCCCCCcHHHHHHHHcC-----CCCceEEEEEeCCCCchhHHHHHHHHHHhcCCCcCceeeccHHH
Confidence 57999999999999999999999999997 7999999998 8999999999999999999987 79999999
Q ss_pred hcccccccchhhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCCcchhhhhhhhhc
Q 013877 297 EYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSA 376 (434)
Q Consensus 297 E~~~Dlfge~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~~~~e~l~Gli~~li~e~G~~~m~~~vssp~~~eyg~~~~~ 376 (434)
|+++||||||++|||+++++++++||++|++||+|++|++++.++++ +|+++|+++||.+|+++|| +|++||.|-..
T Consensus 213 EtetDLfGEQaVLcGgl~~li~agFetLveaGy~P~~a~~~~~~e~k-lIvdli~egGi~~M~~siS--~TAe~G~~~~~ 289 (491)
T 3ulk_A 213 EVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWE-TITEALKQGGITLMMDRLS--NPAKLRAYALS 289 (491)
T ss_dssp HHHHHHHHHHTTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTSC--HHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-HHHHHHHhCCHHHHHHhcC--chhhccchhhh
Confidence 99999999999999999999999999999999999999999888887 8999999999999999999 67789997322
Q ss_pred -cc-hhHHHHHHHHHHhccCChhHHHHHHhcCc
Q 013877 377 -SY-YPCMEILYECYEDVAAGSEIRSVVLAGRR 407 (434)
Q Consensus 377 -~~-~p~~~~m~e~~~~v~~G~f~r~~~~~~~~ 407 (434)
.. ..++++|+++|++|++|+|+|+|+.+++.
T Consensus 290 ~~~~~~~k~~~~~~l~~I~sG~Fa~~~~~e~~~ 322 (491)
T 3ulk_A 290 EQLKEIMAPLFQKHMDDIISGEFSSGMMADWAN 322 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHhCCcchHHHHHHHHc
Confidence 32 34678999999999999999999998754
No 3
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=100.00 E-value=1.6e-40 Score=332.94 Aligned_cols=300 Identities=28% Similarity=0.468 Sum_probs=258.9
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
..+++ ++|+|||+|+||.++|++|+++ |++|+++++..+++++.+.+.|+.. . +.++++++||+||++
T Consensus 12 ~~l~~-~~I~IIG~G~mG~alA~~L~~~------G~~V~~~~~~~~~~~~~a~~~G~~~----~-~~~e~~~~aDvVila 79 (338)
T 1np3_A 12 SIIQG-KKVAIIGYGSQGHAHACNLKDS------GVDVTVGLRSGSATVAKAEAHGLKV----A-DVKTAVAAADVVMIL 79 (338)
T ss_dssp HHHHT-SCEEEECCSHHHHHHHHHHHHT------TCCEEEECCTTCHHHHHHHHTTCEE----E-CHHHHHHTCSEEEEC
T ss_pred chhcC-CEEEEECchHHHHHHHHHHHHC------cCEEEEEECChHHHHHHHHHCCCEE----c-cHHHHHhcCCEEEEe
Confidence 56788 8999999999999999999999 9998888887666678888889863 3 888999999999999
Q ss_pred ecchHHHHHHH-HHHhcCCCCcEEEEeccchhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEe
Q 013877 186 ISDAAQADNYE-KIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (434)
Q Consensus 186 vpd~a~~~vl~-eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~alia 264 (434)
+|+..+.++++ ++.+++++|++|++++|+++ .... +.++.+++|+++||++|++.++++|+.| .|.+++++
T Consensus 80 vp~~~~~~v~~~~i~~~l~~~~ivi~~~gv~~-~~~~--~~~~~~~~vv~~~P~gp~~a~~~l~~~G-----~g~~~ii~ 151 (338)
T 1np3_A 80 TPDEFQGRLYKEEIEPNLKKGATLAFAHGFSI-HYNQ--VVPRADLDVIMIAPKAPGHTVRSEFVKG-----GGIPDLIA 151 (338)
T ss_dssp SCHHHHHHHHHHHTGGGCCTTCEEEESCCHHH-HTTS--SCCCTTCEEEEEEESSCSHHHHHHHHTT-----CCCCEEEE
T ss_pred CCcHHHHHHHHHHHHhhCCCCCEEEEcCCchh-HHHh--hcCCCCcEEEeccCCCCchhHHHHHhcc-----CCCeEEEE
Confidence 99999999998 99999999999999999987 4433 3346788999999999999999999986 79999999
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCc--ccccchhhhcccccccchhhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 013877 265 VHQDVDGRATNVALGWSVALGSPF--TFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI 342 (434)
Q Consensus 265 v~qdvsg~a~e~a~~la~aiG~~~--~iettf~~E~~~Dlfge~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~~~~e~l 342 (434)
++++.++++.+.+..|+..+|..+ ++++++.+|+..|+|+++++|||++|+++...++.+++.|+++++||++++++.
T Consensus 152 ~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a~~e~~~~~ 231 (338)
T 1np3_A 152 IYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMAYFECLHEL 231 (338)
T ss_dssp EEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTTH
T ss_pred ecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHhhhHH
Confidence 999999999999999999999856 788999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHhcHHHHHHhcCCcchhhhhhhhhc-cc--hhHHHHHHHHHHhccCChhHHHHHHhcCccchhcCCCCCcc
Q 013877 343 TGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSA-SY--YPCMEILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPM 419 (434)
Q Consensus 343 ~Gli~~li~e~G~~~m~~~vssp~~~eyg~~~~~-~~--~p~~~~m~e~~~~v~~G~f~r~~~~~~~~~~~~~~~~~~~~ 419 (434)
. ++.++|..+|+..|+...|+ .+.|++.+.. .. ...++.|+++++.|++|+|.++|+.+++. +|..|.+ -.
T Consensus 232 ~-~~~~~~~~gg~~~~r~a~s~--p~~~~d~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~--~r~~~~~-~~ 305 (338)
T 1np3_A 232 K-LIVDLMYEGGIANMNYSISN--NAEYGEYVTGPEVINAESRAAMRNALKRIQDGEYAKMFITEGAA--NYPSMTA-YR 305 (338)
T ss_dssp H-HHHHHHHHHHHHHHHHHSCH--HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTHHHHHHHHHHHT--TSHHHHH-HH
T ss_pred H-HHHHHHHhcCHHHHHHhcCC--HHHHhhhhcCCccccHHHHHHHHHHHHHHhCCHHHHHHHHHHhc--ccHHHHH-HH
Confidence 6 78999899999888766664 4569887432 11 34678999999999999999999998765 2334443 45
Q ss_pred cccccccccccC
Q 013877 420 GKIDQTRIPINT 431 (434)
Q Consensus 420 ~~~~~~~~w~~~ 431 (434)
.++++.+||++|
T Consensus 306 ~~~~~~~~~~~g 317 (338)
T 1np3_A 306 RNNAAHPIEQIG 317 (338)
T ss_dssp HHHHHSHHHHHH
T ss_pred HHHhCCcHHHHH
Confidence 566789999986
No 4
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.97 E-value=7e-31 Score=256.47 Aligned_cols=221 Identities=16% Similarity=0.149 Sum_probs=188.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc---EEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~---~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd 188 (434)
+||+|||+|+||.+++++|.++ |+ +|++++|+.++..+.+.+.|+.. ..+..++++++|+||+++||
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~------g~~~~~V~v~dr~~~~~~~l~~~~gi~~----~~~~~~~~~~aDvVilav~p 73 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN------GYDPNRICVTNRSLDKLDFFKEKCGVHT----TQDNRQGALNADVVVLAVKP 73 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT------TCCGGGEEEECSSSHHHHHHHHTTCCEE----ESCHHHHHSSCSEEEECSCG
T ss_pred CEEEEEcccHHHHHHHHHHHHC------CCCCCeEEEEeCCHHHHHHHHHHcCCEE----eCChHHHHhcCCeEEEEeCH
Confidence 7899999999999999999999 88 88888776555444444458875 56889999999999999999
Q ss_pred hHHHHHHHHHHhc-CCCCcE-EEEeccchhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeec
Q 013877 189 AAQADNYEKIFSC-MKPNSI-LGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (434)
Q Consensus 189 ~a~~~vl~eI~~~-Lk~g~i-L~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~ 266 (434)
+...+++++|.++ ++++++ |++++|+.+..++. .++.+.+|+++|||+|... |.|++. ++..
T Consensus 74 ~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~---~l~~~~~vvr~mPn~p~~v------------~~g~~~-l~~~ 137 (280)
T 3tri_A 74 HQIKMVCEELKDILSETKILVISLAVGVTTPLIEK---WLGKASRIVRAMPNTPSSV------------RAGATG-LFAN 137 (280)
T ss_dssp GGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHH---HHTCCSSEEEEECCGGGGG------------TCEEEE-EECC
T ss_pred HHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHH---HcCCCCeEEEEecCChHHh------------cCccEE-EEeC
Confidence 9999999999998 888865 56889999877765 5566779999999999887 478887 5567
Q ss_pred CCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 013877 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECI 342 (434)
Q Consensus 267 qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~a----liea~~~~~v~~Gl~~e~A~~~~~e~l 342 (434)
.+++.++++.+..++..+|....+ ..| ++++..+.++|++|+ +++++.+.+++.|+++++|++++.|++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~~~v----~~E---~~~d~~talsgsgpa~~~~~~eal~~a~v~~Gl~~~~a~~l~~~t~ 210 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLVIWV----SSE---DQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTV 210 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEEEEC----SSH---HHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEE----CCH---HHhhHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 888999999999999999964111 123 367788999999998 679999999999999999999999999
Q ss_pred HHHHHHHHHHhcH--HHHHHhcCCcc
Q 013877 343 TGIISKIISTQGM--LAVYNSFSGED 366 (434)
Q Consensus 343 ~Gli~~li~e~G~--~~m~~~vssp~ 366 (434)
.| .++|+.++|. ..++|+|+||.
T Consensus 211 ~G-~a~~~~~~~~~p~~l~~~v~spg 235 (280)
T 3tri_A 211 LG-AARMALETEQSVVQLRQFVTSPG 235 (280)
T ss_dssp HH-HHHHHHTCSSCHHHHHHHHCCTT
T ss_pred HH-HHHHHHhcCCCHHHHHHhccCCC
Confidence 99 9999999996 99999999995
No 5
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.96 E-value=1e-28 Score=235.20 Aligned_cols=221 Identities=19% Similarity=0.282 Sum_probs=171.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc----EEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI----VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~----~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavp 187 (434)
+||+|||+|+||.+++++|.++ |+ +|++++|+.++..+.+.+.|+.. ..+..|+++++|+||+++|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~------g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~~~e~~~~aDvVilav~ 72 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK------NIVSSNQIICSDLNTANLKNASEKYGLTT----TTDNNEVAKNADILILSIK 72 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSCHHHHHHHCSEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhC------CCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCChHHHHHhCCEEEEEeC
Confidence 7899999999999999999999 97 88877776444444444568775 5688999999999999999
Q ss_pred chHHHHHHHHHHhcCCCCcEE-EEeccchhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeec
Q 013877 188 DAAQADNYEKIFSCMKPNSIL-GLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL-~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~ 266 (434)
|+...++++++.++++++++| ++++|+.+..+++ .++.+..++++|||.|... +.|+.. ++..
T Consensus 73 ~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~---~~~~~~~~v~~~p~~p~~~------------~~g~~~-~~~~ 136 (247)
T 3gt0_A 73 PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTEN---AFNKKVKVVRVMPNTPALV------------GEGMSA-LCPN 136 (247)
T ss_dssp TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHH---HHCSCCEEEEEECCGGGGG------------TCEEEE-EEEC
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHH---HhCCCCcEEEEeCChHHHH------------cCceEE-EEeC
Confidence 999999999999999999865 4889998776654 4456778999999999876 367766 5567
Q ss_pred CCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 013877 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECI 342 (434)
Q Consensus 267 qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~a----liea~~~~~v~~Gl~~e~A~~~~~e~l 342 (434)
...+.++.+.+..++..+|.. +.. .| +.++..+.++|++|+ ++|++.+.+++.|+++++|++.+.+++
T Consensus 137 ~~~~~~~~~~~~~l~~~~G~~--~~~---~e---~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~ 208 (247)
T 3gt0_A 137 EMVTEKDLEDVLNIFNSFGQT--EIV---SE---KLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAV 208 (247)
T ss_dssp TTCCHHHHHHHHHHHGGGEEE--EEC---CG---GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCE--EEe---CH---HHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 778899999999999999963 211 23 356677889999997 788999999999999999999999999
Q ss_pred HHHHHHHHHHhcH--HHHHHhcCCcch
Q 013877 343 TGIISKIISTQGM--LAVYNSFSGEDK 367 (434)
Q Consensus 343 ~Gli~~li~e~G~--~~m~~~vssp~~ 367 (434)
.| +++|+.++|. ..|+|+|+||.-
T Consensus 209 ~g-s~~~~~~~~~~p~~l~~~v~spgG 234 (247)
T 3gt0_A 209 LG-SAKMVLETGIHPGELKDMVCSPGG 234 (247)
T ss_dssp HH-HHHHHHHSCC--------------
T ss_pred HH-HHHHHHHcCCCHHHHHHhcCCCCc
Confidence 99 8999999997 999999999963
No 6
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.91 E-value=3.3e-23 Score=205.30 Aligned_cols=222 Identities=14% Similarity=0.103 Sum_probs=175.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC----cEEEEEecCCc-hhHHHHHHcCccccCCCcCCHHhhhccCCEEEEee
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD----IVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G----~~Vivg~r~~~-~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
+||+|||+|+||.++|.+|.++ | ++|++++|..+ ...+...+.|+.. ..+..++++++|+||++|
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~------G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~----~~~~~e~~~~aDvVilav 92 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA------GVLAAHKIMASSPDMDLATVSALRKMGVKL----TPHNKETVQHSDVLFLAV 92 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT------TSSCGGGEEEECSCTTSHHHHHHHHHTCEE----ESCHHHHHHHCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCCcceEEEECCCccHHHHHHHHHcCCEE----eCChHHHhccCCEEEEEe
Confidence 7899999999999999999998 8 78887777643 2445555678775 467889999999999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEEEEe-ccchhhhhhcccc-cCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEe
Q 013877 187 SDAAQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGL-DFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL~~s-~G~~i~~~~~~~i-~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~alia 264 (434)
||+...++++++.+.++++++|++. .|+.+..+.+..- .+ .+..|++.||++|... +.|... ++
T Consensus 93 ~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~-~~~~vv~~~p~~p~~~------------~~g~~v-~~ 158 (322)
T 2izz_A 93 KPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFR-PAPRVIRCMTNTPVVV------------REGATV-YA 158 (322)
T ss_dssp CGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTS-SCCEEEEEECCGGGGG------------TCEEEE-EE
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcC-CCCeEEEEeCCcHHHH------------cCCeEE-EE
Confidence 9999999999999999999887654 6887654433100 11 2458999999999876 256644 44
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHH----HHHHHHHHHHHcCCCHHHHHHHHHH
Q 013877 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVE 340 (434)
Q Consensus 265 v~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~a----liea~~~~~v~~Gl~~e~A~~~~~e 340 (434)
...+.+.+..+.+..++..+|.. + +...|+++..+.++|++|+ +++++.+.+++.|+++++++.++.+
T Consensus 159 ~g~~~~~~~~~~v~~ll~~~G~~--~------~~~e~~~~~~~a~~g~gpa~~~~~~eala~a~~~~Gl~~~~a~~l~~~ 230 (322)
T 2izz_A 159 TGTHAQVEDGRLMEQLLSSVGFC--T------EVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQ 230 (322)
T ss_dssp ECTTCCHHHHHHHHHHHHTTEEE--E------ECCGGGHHHHHHHTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhCCCE--E------EeCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 56667789999999999999953 1 1123567788888998887 6889999999999999999999999
Q ss_pred HHHHHHHHHHHHhcH--HHHHHhcCCcc
Q 013877 341 CITGIISKIISTQGM--LAVYNSFSGED 366 (434)
Q Consensus 341 ~l~Gli~~li~e~G~--~~m~~~vssp~ 366 (434)
++.| .++++.+.|. ..+++.+++|.
T Consensus 231 ~~~g-~~~~~~~~~~~p~~l~~~v~sp~ 257 (322)
T 2izz_A 231 ALLG-AAKMLLHSEQHPGQLKDNVSSPG 257 (322)
T ss_dssp HHHH-HHHHHHHCSSCHHHHHHHHCCTT
T ss_pred HHHH-HHHHHHhcCCCHHHHHHhCCCCC
Confidence 9998 7888887764 67889998884
No 7
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.87 E-value=3.6e-21 Score=183.05 Aligned_cols=213 Identities=13% Similarity=0.200 Sum_probs=165.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC----cEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD----IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G----~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavp 187 (434)
+||+|||+|+||.++|.+|.++ | ++|.+++|..++ .|+.. ..+..++++++|+||+++|
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~------g~~~~~~v~~~~~~~~~-------~g~~~----~~~~~~~~~~~D~vi~~v~ 67 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA------NIIKKENLFYYGPSKKN-------TTLNY----MSSNEELARHCDIIVCAVK 67 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TSSCGGGEEEECSSCCS-------SSSEE----CSCHHHHHHHCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCCCCCeEEEEeCCccc-------CceEE----eCCHHHHHhcCCEEEEEeC
Confidence 6899999999999999999998 8 688777776443 57664 4678899999999999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeecC
Q 013877 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~q 267 (434)
+....++++++.++++++.+|+++.|+....+.+ .++.+.++++++|+.|... +.| ...++...
T Consensus 68 ~~~~~~v~~~l~~~l~~~~vv~~~~gi~~~~l~~---~~~~~~~~v~~~p~~p~~~------------~~g-~~~~~~~~ 131 (262)
T 2rcy_A 68 PDIAGSVLNNIKPYLSSKLLISICGGLNIGKLEE---MVGSENKIVWVMPNTPCLV------------GEG-SFIYCSNK 131 (262)
T ss_dssp TTTHHHHHHHSGGGCTTCEEEECCSSCCHHHHHH---HHCTTSEEEEEECCGGGGG------------TCE-EEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHH---HhCCCCcEEEECCChHHHH------------cCC-eEEEEeCC
Confidence 9999999999999885555677889998765554 3455557889999888765 367 44466666
Q ss_pred CCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 013877 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECIT 343 (434)
Q Consensus 268 dvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~a----liea~~~~~v~~Gl~~e~A~~~~~e~l~ 343 (434)
+.+.+..+.+..++..+|. ++.. ..+.++..+.++++.|+ +++++.+.+++.|++++.++....+.+.
T Consensus 132 ~~~~~~~~~~~~ll~~~G~--~~~~------~~~~~~~~~a~~~~~~~~~~~~~~al~~~~~~~Gl~~~~~~~~~~~~~~ 203 (262)
T 2rcy_A 132 NVNSTDKKYVNDIFNSCGI--IHEI------KEKDMDIATAISGCGPAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIK 203 (262)
T ss_dssp TCCHHHHHHHHHHHHTSEE--EEEC------CGGGHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCC--EEEe------CHHHccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 6788999999999999994 2222 12356677888887775 7788888899999999999999999988
Q ss_pred HHHHHHHHHhcH--HHHHHhcCCcc
Q 013877 344 GIISKIISTQGM--LAVYNSFSGED 366 (434)
Q Consensus 344 Gli~~li~e~G~--~~m~~~vssp~ 366 (434)
| +.++..+.+. ..+.|.+++|.
T Consensus 204 ~-~~~~~~~~~~~~~~l~d~~~~~~ 227 (262)
T 2rcy_A 204 G-SVEMVKKSDQPVQQLKDNIVSPG 227 (262)
T ss_dssp H-HHHHHHHCSSCHHHHHHHHCCTT
T ss_pred H-HHHHHHhcCCCHHHHHHhcCCCC
Confidence 7 6677765443 45566666663
No 8
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.87 E-value=3.9e-21 Score=182.90 Aligned_cols=217 Identities=13% Similarity=0.179 Sum_probs=169.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
+||+|||+|+||.++|.+|.+. | ++|.+++|..++..+.+...|+.. ..+..+++ ++|+||+++|+..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~r~~~~~~~~~~~~g~~~----~~~~~~~~-~~D~vi~~v~~~~ 69 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ------GGYRIYIANRGAEKRERLEKELGVET----SATLPELH-SDDVLILAVKPQD 69 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCEEEEECSSHHHHHHHHHHTCCEE----ESSCCCCC-TTSEEEECSCHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC------CCCeEEEECCCHHHHHHHHHhcCCEE----eCCHHHHh-cCCEEEEEeCchh
Confidence 5899999999999999999998 9 888877766444333334458764 45677888 9999999999888
Q ss_pred HHHHHHHHHhcCCCCcEEEEe-ccchhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeecCCC
Q 013877 191 QADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (434)
Q Consensus 191 ~~~vl~eI~~~Lk~g~iL~~s-~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~qdv 269 (434)
..++++++.+ + +++|++. .|+....+.+ .++.+..+++++|+.|... +.|... +.+....
T Consensus 70 ~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~---~~~~~~~~v~~~~~~~~~~------------~~g~~~-i~~~~~~ 130 (263)
T 1yqg_A 70 MEAACKNIRT--N-GALVLSVAAGLSVGTLSR---YLGGTRRIVRVMPNTPGKI------------GLGVSG-MYAEAEV 130 (263)
T ss_dssp HHHHHTTCCC--T-TCEEEECCTTCCHHHHHH---HTTSCCCEEEEECCGGGGG------------TCEEEE-EECCTTS
T ss_pred HHHHHHHhcc--C-CCEEEEecCCCCHHHHHH---HcCCCCcEEEEcCCHHHHH------------cCceEE-EEcCCCC
Confidence 8888887766 5 7777766 7887765554 4455678999999988765 356766 4456666
Q ss_pred CHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 013877 270 DGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECITGI 345 (434)
Q Consensus 270 sg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~a----liea~~~~~v~~Gl~~e~A~~~~~e~l~Gl 345 (434)
+.+..+.+..++..+|.. +.. . ..|.++..++++|+.++ +++++.+.+++.|++++.++..+.+++.|
T Consensus 131 ~~~~~~~~~~l~~~~g~~--~~~---~--~~~~~~~~~al~g~~~~~~~~~~~~l~e~~~~~G~~~~~~~~~~~~~~~~- 202 (263)
T 1yqg_A 131 SETDRRIADRIMKSVGLT--VWL---D--DEEKMHGITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKG- 202 (263)
T ss_dssp CHHHHHHHHHHHHTTEEE--EEC---S--STTHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHhCCCE--EEe---C--ChhhccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-
Confidence 788999999999999853 111 1 13467888888888886 66777888999999999999999999998
Q ss_pred HHHHHHHhc--HHHHHHhcCCcc
Q 013877 346 ISKIISTQG--MLAVYNSFSGED 366 (434)
Q Consensus 346 i~~li~e~G--~~~m~~~vssp~ 366 (434)
..+++.++| ...+++.+++|.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~ 225 (263)
T 1yqg_A 203 AVALAEQTGEDFEKLQKNVTSKG 225 (263)
T ss_dssp HHHHHHHHCCCHHHHHHHTCCTT
T ss_pred HHHHHHhcCCCHHHHHHhcCCCC
Confidence 788999899 678899998874
No 9
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.86 E-value=6.4e-21 Score=181.55 Aligned_cols=217 Identities=16% Similarity=0.148 Sum_probs=167.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
++||+|||+|+||.+++.+|.+. |++|.+++++.++..+.+.+.|+.. ..+.+++++++|+|++++|+..
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~------g~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~D~Vi~~v~~~~ 72 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT------PHELIISGSSLERSKEIAEQLALPY----AMSHQDLIDQVDLVILGIKPQL 72 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS------SCEEEEECSSHHHHHHHHHHHTCCB----CSSHHHHHHTCSEEEECSCGGG
T ss_pred ccEEEEECCCHHHHHHHHHHHhC------CCeEEEECCCHHHHHHHHHHcCCEe----eCCHHHHHhcCCEEEEEeCcHh
Confidence 47999999999999999999988 8888777665444334444457764 5688899999999999999988
Q ss_pred HHHHHHHHHhcCCCCcEEEEe-ccchhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeecCCC
Q 013877 191 QADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (434)
Q Consensus 191 ~~~vl~eI~~~Lk~g~iL~~s-~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~qdv 269 (434)
+.+++.+ +++|++|+.. .|+....+.+ .++.+.++++.+|+.|... +.|... +.+....
T Consensus 73 ~~~v~~~----l~~~~~vv~~~~~~~~~~l~~---~~~~~~~~v~~~p~~~~~~------------~~g~~~-i~~~~~~ 132 (259)
T 2ahr_A 73 FETVLKP----LHFKQPIISMAAGISLQRLAT---FVGQDLPLLRIMPNMNAQI------------LQSSTA-LTGNALV 132 (259)
T ss_dssp HHHHHTT----SCCCSCEEECCTTCCHHHHHH---HHCTTSCEEEEECCGGGGG------------TCEEEE-EEECTTC
T ss_pred HHHHHHH----hccCCEEEEeCCCCCHHHHHH---hcCCCCCEEEEcCCchHHH------------cCceEE-EEcCCCC
Confidence 7777755 3478777655 6787665544 3345568999999988765 356555 4556667
Q ss_pred CHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 013877 270 DGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECITGI 345 (434)
Q Consensus 270 sg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~a----liea~~~~~v~~Gl~~e~A~~~~~e~l~Gl 345 (434)
+.+..+.+..++..+|. ++.. .+ +.++..+.++|+.|+ +++++.+.+++.|+++++++....+++.|
T Consensus 133 ~~~~~~~~~~ll~~~G~--~~~~---~~---~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~~~~~~~- 203 (259)
T 2ahr_A 133 SQELQARVRDLTDSFGS--TFDI---SE---KDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLA- 203 (259)
T ss_dssp CHHHHHHHHHHHHTTEE--EEEC---CG---GGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHhCCC--EEEe---cH---HHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-
Confidence 88999999999999993 3322 22 246677888887765 77889999999999999999999999998
Q ss_pred HHHHHHHhc--HHHHHHhcCCcc
Q 013877 346 ISKIISTQG--MLAVYNSFSGED 366 (434)
Q Consensus 346 i~~li~e~G--~~~m~~~vssp~ 366 (434)
..+++.++| -..+++.+++|.
T Consensus 204 ~~~~~~~~~~~p~~l~~~~~~p~ 226 (259)
T 2ahr_A 204 SASNLKTSSQSPHDFIDAICSPG 226 (259)
T ss_dssp HHHHHHHSSSCHHHHHHHHCCTT
T ss_pred HHHHHHhcCCCHHHHHHhCCCCC
Confidence 788888888 567778888875
No 10
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.83 E-value=2.7e-19 Score=173.41 Aligned_cols=213 Identities=13% Similarity=0.080 Sum_probs=152.2
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch
Q 013877 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (434)
Q Consensus 111 ~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~ 189 (434)
|+||+|||+ |+||.++|++|.+. |++|++++|. .+..+.+.+.|+. ..+..++++++|+||+++|+.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~------g~~V~~~~r~-~~~~~~~~~~g~~-----~~~~~~~~~~aDvVi~av~~~ 78 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS------AHHLAAIEIA-PEGRDRLQGMGIP-----LTDGDGWIDEADVVVLALPDN 78 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS------SSEEEEECCS-HHHHHHHHHTTCC-----CCCSSGGGGTCSEEEECSCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHhcCCC-----cCCHHHHhcCCCEEEEcCCch
Confidence 379999999 99999999999999 9998776665 3344555556754 346778899999999999999
Q ss_pred HHHHHHHHHHhcCCCCcEEEE-eccchhhhhhcccccCCCCccEEEeccCCChhhH----HHHHhhcccccCCC------
Q 013877 190 AQADNYEKIFSCMKPNSILGL-SHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV----RRLYVQGKEINGAG------ 258 (434)
Q Consensus 190 a~~~vl~eI~~~Lk~g~iL~~-s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~v----r~ly~~G~~~~G~G------ 258 (434)
...++++++.+.++++++|++ +.|..+..+.+ . .++..|++.||+.|+... ... +.|
T Consensus 79 ~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~---~-~~~~~~v~~~P~~~~~~~~~~~~~~--------~~g~l~~~~ 146 (286)
T 3c24_A 79 IIEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP---E-RADITYFIGHPCHPPLFNDETDPAA--------RTDYHGGIA 146 (286)
T ss_dssp HHHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC---C-CTTSEEEEEEECCSCSSCCCCSHHH--------HTCSSSSSS
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCchhHHHHh---h-hCCCeEEecCCCCccccccccchhh--------ccCcccccc
Confidence 999999999999999998774 45555544432 2 346889999999987610 001 145
Q ss_pred -ceEEEeecCCCCHHHHHHHHHHHHHhCCC--cccccchhhhcccccccchh---hhhchHHHHHHHHHHHHHHcCCCHH
Q 013877 259 -INSSFAVHQDVDGRATNVALGWSVALGSP--FTFATTLEQEYRSDIFGERG---ILLGAVHGIVESLFRRFTENGMNED 332 (434)
Q Consensus 259 -v~aliav~qdvsg~a~e~a~~la~aiG~~--~~iettf~~E~~~Dlfge~t---vL~G~~~aliea~~~~~v~~Gl~~e 332 (434)
.+.++. ....+.+..+.+..++..+|.+ +++.. .+...|.++... ..+..+.+++|++.+.+++.|++++
T Consensus 147 ~~~~i~~-~~~~~~~~~~~v~~l~~~~G~~~~~~~~v---~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~ 222 (286)
T 3c24_A 147 KQAIVCA-LMQGPEEHYAIGADICETMWSPVTRTHRV---TTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQ 222 (286)
T ss_dssp CEEEEEE-EEESCTHHHHHHHHHHHHHTCSEEEEEEC---CHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHH
T ss_pred cceeeee-ccCCCHHHHHHHHHHHHHhcCCcceEEEe---ChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 344333 2335778999999999999973 23333 233344442211 1223333488889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 013877 333 LAYKNTVECITGIISKIIST 352 (434)
Q Consensus 333 ~A~~~~~e~l~Gli~~li~e 352 (434)
+++.++.+++.| +++++.+
T Consensus 223 ~~~~~~~~~~~~-~~~~~~~ 241 (286)
T 3c24_A 223 AALDFMIGHLNV-EIAMWFG 241 (286)
T ss_dssp HHHHHHHHHHHH-HHHHHTT
T ss_pred HHHHHHHHHHHH-HHHHHHh
Confidence 999999999987 5665543
No 11
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.79 E-value=4.2e-19 Score=171.65 Aligned_cols=230 Identities=11% Similarity=0.045 Sum_probs=161.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
++||+|||+|+||.++|++|.+. |.|++|+++++. ....+.+.+.|... ....+++++++++|+||+++|+..
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~----g~~~~V~~~d~~-~~~~~~~~~~g~~~--~~~~~~~~~~~~aDvVilavp~~~ 78 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD----HPHYKIVGYNRS-DRSRDIALERGIVD--EATADFKVFAALADVIILAVPIKK 78 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSS-HHHHHHHHHTTSCS--EEESCTTTTGGGCSEEEECSCHHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhC----CCCcEEEEEcCC-HHHHHHHHHcCCcc--cccCCHHHhhcCCCEEEEcCCHHH
Confidence 37999999999999999999987 113577665554 44455666677631 013577788999999999999999
Q ss_pred HHHHHHHHHhc-CCCCcEEEEeccchh---hhhhcccccCCC-CccEEEeccC------CChhhHHHHHhhcccccCCCc
Q 013877 191 QADNYEKIFSC-MKPNSILGLSHGFLL---GHLQSMGLDFPK-NIGVIAVCPK------GMGPSVRRLYVQGKEINGAGI 259 (434)
Q Consensus 191 ~~~vl~eI~~~-Lk~g~iL~~s~G~~i---~~~~~~~i~~~~-di~VI~v~Pn------~pg~~vr~ly~~G~~~~G~Gv 259 (434)
+.++++++.++ ++++++|++.++... ..+.+ .++. .++++..||. +|+.... ....|.
T Consensus 79 ~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~---~l~~~~~~~v~~~P~~g~~~~g~~~a~~--------~l~~g~ 147 (290)
T 3b1f_A 79 TIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEY---YLKDKPVQFVGSHPMAGSHKSGAVAANV--------NLFENA 147 (290)
T ss_dssp HHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHH---HHTTSSCEEEEEEEC-----CCTTSCCT--------TTTTTS
T ss_pred HHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHH---hccccCCEEEEeCCcCCCCcchHHHhhH--------HHhCCC
Confidence 99999999999 999999888777653 33333 2333 6778888886 4443211 123567
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 013877 260 NSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTV 339 (434)
Q Consensus 260 ~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~~~~ 339 (434)
+..++++...+.+..+.+..++..+|.. ++.++.++ .|.. .+.++++.|.+.-++.+.+...|++.+.++.++.
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~l~~~~G~~-~~~~~~~~---~d~~--~a~~s~~~~~~a~~~~~~~~~~g~~~~~~~~la~ 221 (290)
T 3b1f_A 148 YYIFSPSCLTKPNTIPALQDLLSGLHAR-YVEIDAAE---HDCV--TSQISHFPHIIASSLMKQAGDFSESHEMTKHFAA 221 (290)
T ss_dssp EEEEEECTTCCTTHHHHHHHHTGGGCCE-EEECCHHH---HHHH--HHHHTHHHHHHHHHHHHHHHHHHHHCTHHHHHCC
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCE-EEEcCHHH---HHHH--HHHHhhHHHHHHHHHHHHHHhcccchhhHHhhcc
Confidence 7778888777888999999999999973 33332111 1211 2456777776555555666667888889999999
Q ss_pred HHHHHHHHHHHHHhcHHHHHHhcCCcc
Q 013877 340 ECITGIISKIISTQGMLAVYNSFSGED 366 (434)
Q Consensus 340 e~l~Gli~~li~e~G~~~m~~~vssp~ 366 (434)
+++.+ ++++. ..--..++|.+++|.
T Consensus 222 ~~~~~-~~rla-~~~p~~~~~~~~~n~ 246 (290)
T 3b1f_A 222 GGFRD-MTRIA-ESEPGMWTSILLTNQ 246 (290)
T ss_dssp HHHHH-TTGGG-GSCHHHHHHHHHHSH
T ss_pred ccHHh-hhhhh-cCCHHHHHHHHHHCH
Confidence 99987 66666 333455677777665
No 12
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.79 E-value=1.7e-19 Score=173.68 Aligned_cols=260 Identities=12% Similarity=0.041 Sum_probs=177.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc-cCCEEEEeec
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLIS 187 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~-~ADiViLavp 187 (434)
|+||+|||+|+||.++|++|++. |+ +|+++++. .+..+.+.+.|... ....+.+++++ ++|+||+++|
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~------g~~~~V~~~d~~-~~~~~~~~~~g~~~--~~~~~~~~~~~~~aDvVilavp 71 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDIN-PESISKAVDLGIID--EGTTSIAKVEDFSPDFVMLSSP 71 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECSC-HHHHHHHHHTTSCS--EEESCGGGGGGTCCSEEEECSC
T ss_pred CcEEEEEecCHHHHHHHHHHHhc------CCCcEEEEEeCC-HHHHHHHHHCCCcc--cccCCHHHHhcCCCCEEEEcCC
Confidence 57999999999999999999998 88 87665554 44456677778741 11346778999 9999999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEEEeccchh---hhhhcccccCCCCccEEEeccCC------ChhhHHHHHhhcccccCCC
Q 013877 188 DAAQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKG------MGPSVRRLYVQGKEINGAG 258 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~~s~G~~i---~~~~~~~i~~~~di~VI~v~Pn~------pg~~vr~ly~~G~~~~G~G 258 (434)
+....++++++.++++++++|+++++... ..+.+ .++. .++..||.. |+.. ....+.|
T Consensus 72 ~~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~---~l~~--~~v~~~p~~~~~~~gp~~a--------~~~l~~g 138 (281)
T 2g5c_A 72 VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN---ILGK--RFVGGHPIAGTEKSGVEYS--------LDNLYEG 138 (281)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH---HHGG--GEECEEEECCCSCCSGGGC--------CSSTTTT
T ss_pred HHHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHH---hccc--cceeeccccCCccCChhhh--------hhHHhCC
Confidence 99999999999999999999888777643 22222 2222 266666632 2221 1112357
Q ss_pred ceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHHH-HHHHHHHHHHcCCCHHHHHHH
Q 013877 259 INSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGI-VESLFRRFTENGMNEDLAYKN 337 (434)
Q Consensus 259 v~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~al-iea~~~~~v~~Gl~~e~A~~~ 337 (434)
.+..++++...+.++.+.+..++..+|.. ++.++ +. ..++.+.++|.+|.+ .-++.+.+.+.|++++.++.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~v~~l~~~~g~~-~~~~~---~~---~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l 211 (281)
T 2g5c_A 139 KKVILTPTKKTDKKRLKLVKRVWEDVGGV-VEYMS---PE---LHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKY 211 (281)
T ss_dssp CEEEECCCSSSCHHHHHHHHHHHHHTTCE-EEECC---HH---HHHHHHHHHTHHHHHHHHHHHHHHHHHCBTTBCGGGC
T ss_pred CCEEEecCCCCCHHHHHHHHHHHHHcCCE-EEEcC---HH---HHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhh
Confidence 88888888788889999999999999973 33221 11 234667889999986 467778888889999999998
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHHhcCCcchhhhhhhhhccchhHHHHHHHHHHhccCChh--HHHHHHhcC
Q 013877 338 TVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYECYEDVAAGSE--IRSVVLAGR 406 (434)
Q Consensus 338 ~~e~l~Gli~~li~e~G~~~m~~~vssp~~~eyg~~~~~~~~p~~~~m~e~~~~v~~G~f--~r~~~~~~~ 406 (434)
+.+.+.+ ++++.. .-...++|.+++|...-.. ...-..+.|.++-+.|++|+. .++++.+.+
T Consensus 212 ~~~~~~~-~~r~~~-~~p~~~~~~~~sn~~~~~~-----~l~~~~~~l~~~~~~i~~~d~~~l~~~~~~~~ 275 (281)
T 2g5c_A 212 PGGGFKD-FTRIAK-SDPIMWRDIFLENKENVMK-----AIEGFEKSLNHLKELIVREAEEELVEYLKEVK 275 (281)
T ss_dssp CTTTGGG-C---CC-SCHHHHHHHHHHTHHHHHH-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccccHHH-HhHHhc-CCHHHHHHHHHHCHHHHHH-----HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 8888887 666654 3446667777665421111 112223345556666776665 446665543
No 13
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.77 E-value=1.3e-18 Score=172.82 Aligned_cols=209 Identities=12% Similarity=0.016 Sum_probs=151.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHHcCccccCCCcCCHHh-hhccCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE-TISGSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~E-a~~~ADiViLavpd 188 (434)
+||+|||+|+||.++|++|+++ |+ +|+++++. ....+.+.+.|+.. ....++++ ++++||+||+|+|+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~------G~~~~V~~~dr~-~~~~~~a~~~G~~~--~~~~~~~~~~~~~aDvVilavp~ 104 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDIN-PESISKAVDLGIID--EGTTSIAKVEDFSPDFVMLSSPV 104 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECSC-HHHHHHHHHTTSCS--EEESCTTGGGGGCCSEEEECSCG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC------CCCCEEEEEECC-HHHHHHHHHCCCcc--hhcCCHHHHhhccCCEEEEeCCH
Confidence 7999999999999999999999 98 87665554 55577788888741 11457788 89999999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEeccch---hhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEee
Q 013877 189 AAQADNYEKIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~~s~G~~---i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav 265 (434)
....++++++.++++++++|+++.+.. +..+.+ .++. .+|..||...... ..+......++.|...++++
T Consensus 105 ~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~---~l~~--~~v~~hPm~G~e~--sG~~~A~~~Lf~g~~~il~~ 177 (314)
T 3ggo_A 105 RTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN---ILGK--RFVGGHPIAGTEK--SGVEYSLDNLYEGKKVILTP 177 (314)
T ss_dssp GGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH---HHGG--GEECEEECCCCCC--CSGGGCCTTTTTTCEEEECC
T ss_pred HHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHH---hcCC--CEEecCcccCCcc--cchhhhhhhhhcCCEEEEEe
Confidence 999999999999999999999888775 233332 2233 8999999653211 01111222334577888888
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHH
Q 013877 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIV-ESLFRRFTENGMNEDLAYKNTVECIT 343 (434)
Q Consensus 266 ~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~ali-ea~~~~~v~~Gl~~e~A~~~~~e~l~ 343 (434)
+...+.++++.+..++..+|.. ++..+.++ .+..+.+.+.+|.++ -++.+.+.+.+.+++++..++.....
T Consensus 178 ~~~~~~~~~~~v~~l~~~~G~~-v~~~~~~~------hD~~~a~~s~lph~~a~~l~~~~~~~~~~~~~~~~~a~~~fr 249 (314)
T 3ggo_A 178 TKKTDKKRLKLVKRVWEDVGGV-VEYMSPEL------HDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGGGFK 249 (314)
T ss_dssp CTTSCHHHHHHHHHHHHHTTCE-EEECCHHH------HHHHHHHHTHHHHHHHHHHHHHHHHHCCSSCCGGGCCTTTTT
T ss_pred CCCCCHHHHHHHHHHHHHcCCE-EEEcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHhhccccHH
Confidence 8888999999999999999963 44343222 335577778888855 55667777778777666665555444
No 14
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.75 E-value=3.9e-17 Score=160.08 Aligned_cols=209 Identities=13% Similarity=0.060 Sum_probs=150.1
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
+||+||| +|+||.++|++|++. |++|++.++... .+..+++++||+||+|||+..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~------G~~V~~~~~~~~------------------~~~~~~~~~aDvVilavp~~~ 77 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS------GYPISILDREDW------------------AVAESILANADVVIVSVPINL 77 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT------TCCEEEECTTCG------------------GGHHHHHTTCSEEEECSCGGG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC------CCeEEEEECCcc------------------cCHHHHhcCCCEEEEeCCHHH
Confidence 7999999 999999999999999 998877765422 135678899999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeecCCCC
Q 013877 191 QADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD 270 (434)
Q Consensus 191 ~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~qdvs 270 (434)
..++++++.++++++++|++++++....++...-..+ .+++..||.. ++.. . ...|.+.+++++. +
T Consensus 78 ~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~--~~~v~~hP~~-g~~~-----~----~~~g~~~~l~~~~--~ 143 (298)
T 2pv7_A 78 TLETIERLKPYLTENMLLADLTSVKREPLAKMLEVHT--GAVLGLHPMF-GADI-----A----SMAKQVVVRCDGR--F 143 (298)
T ss_dssp HHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHCS--SEEEEEEECS-CTTC-----S----CCTTCEEEEEEEE--C
T ss_pred HHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhcC--CCEEeeCCCC-CCCc-----h----hhcCCeEEEecCC--C
Confidence 9999999999999999999988876432221000222 5788888842 2221 0 1245567677665 6
Q ss_pred HHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHH---H
Q 013877 271 GRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIV-ESLFRRFTENGMNEDLAYKNTVECITGI---I 346 (434)
Q Consensus 271 g~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~ali-ea~~~~~v~~Gl~~e~A~~~~~e~l~Gl---i 346 (434)
.++.+.+..++..+|.. ++.++ +. ..+..+.+++.+|.++ -++.+.+.+.|++++++++++.+.+.++ +
T Consensus 144 ~~~~~~v~~l~~~~G~~-~~~~~---~~---~~d~~~a~~~~~p~~~a~~l~~~l~~~g~~~~~~~~la~~~f~~~~~~~ 216 (298)
T 2pv7_A 144 PERYEWLLEQIQIWGAK-IYQTN---AT---EHDHNMTYIQALRHFSTFANGLHLSKQPINLANLLALSSPIYRLELAMI 216 (298)
T ss_dssp GGGTHHHHHHHHHTTCE-EEECC---HH---HHHHHHHHHTHHHHHHHHHHHHHHTTSSCCHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCE-EEECC---HH---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcCHHHHHHHHHH
Confidence 78889999999999973 33332 11 2346678889999864 5666777789999999999999998862 3
Q ss_pred HHHHHHhcHHHHHHhcCCcc
Q 013877 347 SKIISTQGMLAVYNSFSGED 366 (434)
Q Consensus 347 ~~li~e~G~~~m~~~vssp~ 366 (434)
+++. ..--..++|.+++|.
T Consensus 217 ~ria-~~~p~~~~di~~sn~ 235 (298)
T 2pv7_A 217 GRLF-AQDAELYADIIMDKS 235 (298)
T ss_dssp HHHH-TSCHHHHHHHHC---
T ss_pred HHHh-cCCHHHHHHHHHHCH
Confidence 4443 334467778877664
No 15
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.74 E-value=1.5e-17 Score=167.48 Aligned_cols=204 Identities=12% Similarity=0.085 Sum_probs=146.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhcc----CCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG----SDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~----ADiViLavp 187 (434)
+||+|||+|+||.++|++|+++ |++|++++++ ....+.+.+.|+.. ..++++++++ +|+||+++|
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~------G~~V~~~dr~-~~~~~~a~~~G~~~----~~~~~e~~~~a~~~aDlVilavP 77 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA------NHSVFGYNRS-RSGAKSAVDEGFDV----SADLEATLQRAAAEDALIVLAVP 77 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSC-HHHHHHHHHTTCCE----ESCHHHHHHHHHHTTCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCee----eCCHHHHHHhcccCCCEEEEeCC
Confidence 7899999999999999999999 9988766554 55677788888864 4677777764 799999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEEEeccchhh---hhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEe
Q 013877 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~alia 264 (434)
+....++++++.++ ++|++|+++++++.. .+.. .++ ++.+|..||...... ..+..+...++.|.+++++
T Consensus 78 ~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~---~~~-~~~~v~~HPmaG~e~--sG~~aa~~~Lf~g~~~ilt 150 (341)
T 3ktd_A 78 MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKA---RNM-QHRYVGSHPMAGTAN--SGWSASMDGLFKRAVWVVT 150 (341)
T ss_dssp HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHH---TTC-GGGEECEEECCSCC---CCGGGCCSSTTTTCEEEEC
T ss_pred HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHH---hCC-CCcEecCCccccccc--cchhhhhhHHhcCCeEEEE
Confidence 99888999999886 899999999887643 3332 233 578999999543211 1233344445667888899
Q ss_pred ecCCCCHH--------HHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHHHHHH-HHHHHHHcCCCHHHHH
Q 013877 265 VHQDVDGR--------ATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVES-LFRRFTENGMNEDLAY 335 (434)
Q Consensus 265 v~qdvsg~--------a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~aliea-~~~~~v~~Gl~~e~A~ 335 (434)
++...+.+ +++.++.++..+|+. ++..+.++ .+..+.+++.+|.++-. +.+.+.+ .++.++
T Consensus 151 p~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~-v~~~~~~~------HD~~~A~vshlPh~ia~aL~~~~~~---~~~~~~ 220 (341)
T 3ktd_A 151 FDQLFDGTDINSTWISIWKDVVQMALAVGAE-VVPSRVGP------HDAAAARVSHLTHILAETLAIVGDN---GGALSL 220 (341)
T ss_dssp CGGGTSSCCCCHHHHHHHHHHHHHHHHTTCE-EEECCHHH------HHHHHHHHTHHHHHHHHHHHHHHHH---THHHHH
T ss_pred eCCCCChhhhccchHHHHHHHHHHHHHcCCE-EEEeCHHH------HHHHHHHHhHHHHHHHHHHHHHhhc---chHHHH
Confidence 88877777 899999999999963 44443333 34567788888885544 3444322 245555
Q ss_pred HHHHHHHH
Q 013877 336 KNTVECIT 343 (434)
Q Consensus 336 ~~~~e~l~ 343 (434)
.++.....
T Consensus 221 ~laa~gfr 228 (341)
T 3ktd_A 221 SLAAGSYR 228 (341)
T ss_dssp HHCCHHHH
T ss_pred HHccccHH
Confidence 55555544
No 16
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.74 E-value=7.9e-17 Score=154.61 Aligned_cols=225 Identities=12% Similarity=0.064 Sum_probs=160.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchHH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a~ 191 (434)
+||+|||+|+||.+++++|.+. |++|++.++. .+..+.+.+.|... ....+++++ +++|+||+++|+...
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~--~~~~~~~~~-~~~D~vi~av~~~~~ 70 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR------GHYLIGVSRQ-QSTCEKAVERQLVD--EAGQDLSLL-QTAKIIFLCTPIQLI 70 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTSCS--EEESCGGGG-TTCSEEEECSCHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHHhCCCCc--cccCCHHHh-CCCCEEEEECCHHHH
Confidence 5899999999999999999998 9988766554 44455566677631 013567788 999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCCCCccEEEeccCC------ChhhHHHHHhhcccccCCCceEEEee
Q 013877 192 ADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKG------MGPSVRRLYVQGKEINGAGINSSFAV 265 (434)
Q Consensus 192 ~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~------pg~~vr~ly~~G~~~~G~Gv~aliav 265 (434)
.++++++.++++++++|+++++.+....+...-.++ .++..||-. |... ....+.|.+..+++
T Consensus 71 ~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~---~~~~~~p~~g~~~~gp~~a--------~~~~~~g~~~~~~~ 139 (279)
T 2f1k_A 71 LPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLWS---GFIGGHPMAGTAAQGIDGA--------EENLFVNAPYVLTP 139 (279)
T ss_dssp HHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHST---TCEEEEECCCCSCSSGGGC--------CTTTTTTCEEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHhC---CEeecCcccCCccCCHHHH--------hHHHhCCCcEEEec
Confidence 999999999999999988777765432221000222 566666743 2211 11123455666777
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHH-HHHHHHHHHHHcCCC--HHHHHHHHHHHH
Q 013877 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-IVESLFRRFTENGMN--EDLAYKNTVECI 342 (434)
Q Consensus 266 ~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~a-liea~~~~~v~~Gl~--~e~A~~~~~e~l 342 (434)
+...+.+..+.+..++..+|.. ++.. .+. ..++.+.+++.+|. +.-++.+.+++.|++ ++.++.++.+.+
T Consensus 140 ~~~~~~~~~~~v~~l~~~~g~~-~~~~---~~~---~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~~~ 212 (279)
T 2f1k_A 140 TEYTDPEQLACLRSVLEPLGVK-IYLC---TPA---DHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASSGF 212 (279)
T ss_dssp CTTCCHHHHHHHHHHHGGGTCE-EEEC---CHH---HHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCE-EEEc---CHH---HHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCCcc
Confidence 7777889999999999999963 2222 122 34566778888876 566788889999988 899999999999
Q ss_pred HHHHHHHHHHhcHHHHHHhcCCcc
Q 013877 343 TGIISKIISTQGMLAVYNSFSGED 366 (434)
Q Consensus 343 ~Gli~~li~e~G~~~m~~~vssp~ 366 (434)
.+ ++++. ..--..++|.+++|.
T Consensus 213 ~~-~~r~~-~~~p~~~~~~~~s~~ 234 (279)
T 2f1k_A 213 RD-TSRVG-GGNPELGTMMATYNQ 234 (279)
T ss_dssp HH-HHTGG-GSCHHHHHHHHHHSH
T ss_pred cc-hhccc-CCCHHHHHHHHHHhH
Confidence 87 66665 344577788887764
No 17
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.63 E-value=2.4e-16 Score=152.46 Aligned_cols=213 Identities=12% Similarity=0.046 Sum_probs=134.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
+||+|||+|+||.+++++|.+. ++|+ ++++..++..+.+...|. . ..+++++++++|+||+++|++.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-------~~v~~v~~~~~~~~~~~~~~~g~-~----~~~~~~~~~~~DvVilav~~~~ 70 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-------YEIGYILSRSIDRARNLAEVYGG-K----AATLEKHPELNGVVFVIVPDRY 70 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----------CCCEECSSHHHHHHHHHHTCC-C----CCSSCCCCC---CEEECSCTTT
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-------CcEEEEEeCCHHHHHHHHHHcCC-c----cCCHHHHHhcCCEEEEeCChHH
Confidence 6899999999999999998643 3553 555553333333344565 3 4577788899999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEec-cchhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeecCCC
Q 013877 191 QADNYEKIFSCMKPNSILGLSH-GFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (434)
Q Consensus 191 ~~~vl~eI~~~Lk~g~iL~~s~-G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~qdv 269 (434)
+.+++.++. +++++|+..+ ++....++. ........+..+|++|.... .+ .+++..++.
T Consensus 71 ~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~---~~~~~~~p~~~~~g~~~~~~--~~--------~~~~~~~~~---- 130 (276)
T 2i76_A 71 IKTVANHLN---LGDAVLVHCSGFLSSEIFKK---SGRASIHPNFSFSSLEKALE--MK--------DQIVFGLEG---- 130 (276)
T ss_dssp HHHHHTTTC---CSSCCEEECCSSSCGGGGCS---SSEEEEEECSCC--CTTGGG--CG--------GGCCEEECC----
T ss_pred HHHHHHHhc---cCCCEEEECCCCCcHHHHHH---hhccccchhhhcCCCchhHH--Hh--------CCCeEEEEe----
Confidence 888887764 6788776555 555544432 11000111223445443320 01 346554443
Q ss_pred CHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q 013877 270 DGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-IVESLFRRFTENGMNEDLAYKNTVECITGIISK 348 (434)
Q Consensus 270 sg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~a-liea~~~~~v~~Gl~~e~A~~~~~e~l~Gli~~ 348 (434)
+.+..+.+..++..+|.. ++.. .+...+.++..+.+++..+. ++..+.+.+++.|+++++|+ ..+.+.| .++
T Consensus 131 ~~~~~~~~~~l~~~lG~~-~~~v---~~~~~~~~~~~~~l~~n~~~~~~~~a~~~~~~~Gl~~~~a~--~~~l~~~-~~~ 203 (276)
T 2i76_A 131 DERGLPIVKKIAEEISGK-YFVI---PSEKKKAYHLAAVIASNFPVALAYLSKRIYTLLGLDEPELL--IHTLMKG-VAD 203 (276)
T ss_dssp CTTTHHHHHHHHHHHCSC-EEEC---CGGGHHHHHHHHHHHHTTHHHHHHHHHHHHHTTTCSCHHHH--HHHHHHH-HHH
T ss_pred ChHHHHHHHHHHHHhCCC-EEEE---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH--HHHHHHH-HHH
Confidence 345688999999999963 2222 22233356677777666665 55555577888999999987 7888887 788
Q ss_pred HHHHhcHHHHHHhcCCcc
Q 013877 349 IISTQGMLAVYNSFSGED 366 (434)
Q Consensus 349 li~e~G~~~m~~~vssp~ 366 (434)
++.+.| -++.+++|.
T Consensus 204 ~~~~~g---p~~~~tgP~ 218 (276)
T 2i76_A 204 NIKKMR---VECSLTGPV 218 (276)
T ss_dssp HHHHSC---GGGGCCSHH
T ss_pred HHHhcC---hHhhCCCCc
Confidence 899988 388899885
No 18
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=99.63 E-value=5.9e-17 Score=167.58 Aligned_cols=98 Identities=19% Similarity=0.393 Sum_probs=86.1
Q ss_pred cccchhhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCCcchhhhhhh-hhccchh
Q 013877 302 IFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKA-YSASYYP 380 (434)
Q Consensus 302 lfge~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~~~~e~l~Gli~~li~e~G~~~m~~~vssp~~~eyg~~-~~~~~~p 380 (434)
.|+....++.++.++++++||++|++||.||.||++|+|+++ ||+++|+++|+.+|++.|| +|||||+| |++.
T Consensus 354 ~f~~Gilmva~v~a~ve~~FEtlveaGy~pE~AYfE~LHElk-LIvdli~e~gl~~M~~sIS--dTAEYG~yl~~~~--- 427 (491)
T 3ulk_A 354 YFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLHELP-LIANTIARKRLYEMNVVIS--DTAEYGNYLFSYA--- 427 (491)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHTTGGGHH-HHHHHHHHHHHHHHHHHSC--HHHHHHHHHHHHH---
T ss_pred chhhhhHHHHHHHHHHhhhHHHHHHcCCcHHHHHHHHHhHHH-HHHHHHHHhhHHHHHhHhh--hHhhhcCEEecHH---
Confidence 354444448889999999999999999999999999999999 9999999999999999999 89999999 5544
Q ss_pred HHHHHHHHHHhccCChhHHHHHHhcC
Q 013877 381 CMEILYECYEDVAAGSEIRSVVLAGR 406 (434)
Q Consensus 381 ~~~~m~e~~~~v~~G~f~r~~~~~~~ 406 (434)
++..|++++++||+|.|+|++ .+|+
T Consensus 428 ~k~~mk~~l~~Iq~g~fak~~-~e~~ 452 (491)
T 3ulk_A 428 CVPLLKPFMAELQPGDLGKAI-PEGA 452 (491)
T ss_dssp HHHHTHHHHHTCCTTSSSSCC-CCCC
T ss_pred HHHHHHHHHHHccCChHhhhh-hhcc
Confidence 455899999999999999994 5554
No 19
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.63 E-value=9.4e-15 Score=139.42 Aligned_cols=206 Identities=13% Similarity=0.101 Sum_probs=136.1
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcE-EEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEee
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~-Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
+.+ +||+|||+|.||.+++++|.+. |++ |.++++..++..+.+...|+.. ..+.+++++++|+||+++
T Consensus 8 ~~~-m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~Dvvi~av 76 (266)
T 3d1l_A 8 IED-TPIVLIGAGNLATNLAKALYRK------GFRIVQVYSRTEESARELAQKVEAEY----TTDLAEVNPYAKLYIVSL 76 (266)
T ss_dssp GGG-CCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSHHHHHHHHHHTTCEE----ESCGGGSCSCCSEEEECC
T ss_pred CCC-CeEEEEcCCHHHHHHHHHHHHC------CCeEEEEEeCCHHHHHHHHHHcCCce----eCCHHHHhcCCCEEEEec
Confidence 345 7899999999999999999998 987 6666655433333334447764 467888899999999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEEEEe-ccchhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEee
Q 013877 187 SDAAQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL~~s-~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav 265 (434)
|+..+.++++++.+.++++++|++. .|+....+.+ .++. .. ..||-.|....+ . ....+.+.++
T Consensus 77 ~~~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~---~~~~-~~--~~~~~~~~~g~~-~------~~~~~~~~~v-- 141 (266)
T 3d1l_A 77 KDSAFAELLQGIVEGKREEALMVHTAGSIPMNVWEG---HVPH-YG--VFYPMQTFSKQR-E------VDFKEIPFFI-- 141 (266)
T ss_dssp CHHHHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTT---TCSS-EE--EEEECCCC---C-C------CCCTTCCEEE--
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEECCCCCchHHHHH---HHHh-cc--CcCCceecCCCc-h------hhcCCCeEEE--
Confidence 9999889999999999999987654 5665544432 2222 11 134544311100 0 0123456544
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHH
Q 013877 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRR-FTENGMNEDLAYKNTVECITG 344 (434)
Q Consensus 266 ~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~aliea~~~~-~v~~Gl~~e~A~~~~~e~l~G 344 (434)
...+.+..+.+..++..+|.. ++.. .+.....|+..+.+++.+++.+-++.+. +.+.|+++++++.+..+++.|
T Consensus 142 -~~~~~~~~~~~~~l~~~~g~~-~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~eal~~~~Gl~~~~~~~l~~~~~~~ 216 (266)
T 3d1l_A 142 -EASSTEDAAFLKAIASTLSNR-VYDA---DSEQRKSLHLAAVFTCNFTNHMYALAAELLKKYNLPFDVMLPLIDETARK 216 (266)
T ss_dssp -EESSHHHHHHHHHHHHTTCSC-EEEC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGGHHHHHHHHHH
T ss_pred -ecCCHHHHHHHHHHHHhcCCc-EEEe---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 223678899999999999963 2222 1111124667777877777533333333 358999999999988888876
No 20
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.58 E-value=4.5e-14 Score=140.85 Aligned_cols=192 Identities=14% Similarity=0.131 Sum_probs=132.6
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHH-----------HcCccccC----------CCc
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-----------AAGFTEEN----------GTL 169 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~-----------~~G~~~~~----------~~~ 169 (434)
++||+|||+|+||.++|.+|.++ |++|+++++.. ...+.+. +.|..... ..+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~------G~~V~l~d~~~-~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~ 78 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEP-RQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC 78 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCH-HHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE
T ss_pred CceEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe
Confidence 38999999999999999999999 99998776653 3334432 23422100 014
Q ss_pred CCHHhhhccCCEEEEeecchHH--HHHHHHHHhcCCCCcEEE-EeccchhhhhhcccccCCCCccEEEeccCCChhhHHH
Q 013877 170 GDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRR 246 (434)
Q Consensus 170 ~~~~Ea~~~ADiViLavpd~a~--~~vl~eI~~~Lk~g~iL~-~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ 246 (434)
.++++++++||+||+++|.... .+++.++.++++++++|+ .++|+.+..+.+ .++....++.+||..|.+.
T Consensus 79 ~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~---~~~~~~r~ig~Hp~~P~~~--- 152 (319)
T 2dpo_A 79 TNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT---GLAHVKQCIVAHPVNPPYY--- 152 (319)
T ss_dssp CCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT---TCTTGGGEEEEEECSSTTT---
T ss_pred CCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHH---hcCCCCCeEEeecCCchhh---
Confidence 6888999999999999997543 478899999999999875 667887766654 3444568999999998754
Q ss_pred HHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhch-HHHHHHHHHHHHH
Q 013877 247 LYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGA-VHGIVESLFRRFT 325 (434)
Q Consensus 247 ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~-~~aliea~~~~~v 325 (434)
+ +.. -+.++...+.+.++.+..++..+|...+.-. .+. . +-+++- +.+++..++..+.
T Consensus 153 ----~------~lv-eiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~---~~~--~-----Gfi~Nrll~a~~~EA~~l~~ 211 (319)
T 2dpo_A 153 ----I------PLV-ELVPHPETSPATVDRTHALMRKIGQSPVRVL---KEI--D-----GFVLNRLQYAIISEAWRLVE 211 (319)
T ss_dssp ----C------CEE-EEEECTTCCHHHHHHHHHHHHHTTCEEEECS---SCC--T-----TTTHHHHHHHHHHHHHHHHH
T ss_pred ----c------ceE-EEeCCCCCCHHHHHHHHHHHHHcCCEEEEEC---CCc--C-----CchHHHHHHHHHHHHHHHHH
Confidence 1 233 3566777899999999999999997421110 111 1 112222 2234444555566
Q ss_pred HcCCCHHHHHH
Q 013877 326 ENGMNEDLAYK 336 (434)
Q Consensus 326 ~~Gl~~e~A~~ 336 (434)
+.|.++++...
T Consensus 212 ~g~~~~~~id~ 222 (319)
T 2dpo_A 212 EGIVSPSDLDL 222 (319)
T ss_dssp TTSSCHHHHHH
T ss_pred hCCCCHHHHHH
Confidence 66779987765
No 21
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.58 E-value=3.3e-15 Score=147.63 Aligned_cols=196 Identities=18% Similarity=0.229 Sum_probs=125.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
|+||||||+|+||.+||+||.++ |++|++++|+.+ ..+...+.|... +.++.|+++++|+||+|+|+..
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~------G~~v~v~dr~~~-~~~~l~~~Ga~~----a~s~~e~~~~~dvv~~~l~~~~ 71 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLVQS-AVDGLVAAGASA----ARSARDAVQGADVVISMLPASQ 71 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSSHH-HHHHHHHTTCEE----CSSHHHHHTTCSEEEECCSCHH
T ss_pred cCEEEEeeehHHHHHHHHHHHhC------CCeEEEEcCCHH-HHHHHHHcCCEE----cCCHHHHHhcCCceeecCCchH
Confidence 68999999999999999999999 999998887644 456666788876 7899999999999999999888
Q ss_pred HH-HHHHH---HHhcCCCCcEEEEeccchhh---hhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEE
Q 013877 191 QA-DNYEK---IFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (434)
Q Consensus 191 ~~-~vl~e---I~~~Lk~g~iL~~s~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~ali 263 (434)
+. +|+.. +.+.+++|++|++.+-.... .+.+ ..-..++.++- +|-.-++. .-++ |--. |
T Consensus 72 ~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~--~~~~~G~~~lD-aPVsGg~~---~A~~-------G~L~-i 137 (300)
T 3obb_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHA--AARERGLAMLD-APVSGGTA---GAAA-------GTLT-F 137 (300)
T ss_dssp HHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHH--HHHTTTCEEEE-CCEESCHH---HHHH-------TCEE-E
T ss_pred HHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEe-cCCCCCHH---HHHh-------CCEE-E
Confidence 75 67753 78899999999988765432 1111 11134666663 45221221 1123 3323 2
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCCcccccc-hhhhcccccccchhhhhchHHHHHHHHHHHHHHcCCCHHHHHH
Q 013877 264 AVHQDVDGRATNVALGWSVALGSPFTFATT-LEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (434)
Q Consensus 264 av~qdvsg~a~e~a~~la~aiG~~~~iett-f~~E~~~Dlfge~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~ 336 (434)
-+.. +.++.+.++.++..+|.. ++..- .-.-... .+--+.++.+...++.|+ +..+.+.|++++..+.
T Consensus 138 mvGG--~~~~~~~~~p~l~~~g~~-i~~~G~~G~g~~~-Kl~~N~l~~~~~~a~aEa-~~la~~~Gld~~~~~~ 206 (300)
T 3obb_A 138 MVGG--DAEALEKARPLFEAMGRN-IFHAGPDGAGQVA-KVCNNQLLAVLMIGTAEA-MALGVANGLEAKVLAE 206 (300)
T ss_dssp EEES--CHHHHHHHHHHHHHHEEE-EEEEESTTHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHHTTCCHHHHHH
T ss_pred EEeC--CHHHHHHHHHHHHHhCCC-EEEeCCccHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHhcCCCHHHHHH
Confidence 2344 568999999999999953 11110 0000000 000111222223334443 4567899999987665
No 22
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.56 E-value=7.5e-14 Score=135.59 Aligned_cols=217 Identities=14% Similarity=0.119 Sum_probs=142.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc-----------C--cccc--------CCCc
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-----------G--FTEE--------NGTL 169 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~-----------G--~~~~--------~~~~ 169 (434)
++||+|||+|+||.++|+.|..+ |++|++++++. +..+.+.+. | .... -...
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~------G~~V~l~d~~~-~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~ 76 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH------GFAVTAYDINT-DALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS 76 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH-HHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCH-HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe
Confidence 47999999999999999999999 99988776653 334444332 2 1100 0014
Q ss_pred CCHHhhhccCCEEEEeecch--HHHHHHHHHHhcCCCCcEEE-EeccchhhhhhcccccCCCCccEEEeccCCChhhHHH
Q 013877 170 GDIYETISGSDLVLLLISDA--AQADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRR 246 (434)
Q Consensus 170 ~~~~Ea~~~ADiViLavpd~--a~~~vl~eI~~~Lk~g~iL~-~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ 246 (434)
.++++++++||+||+++|+. ...++++++.+.++++++|+ .++++.+..+.. ..+...+++.+||..|...
T Consensus 77 ~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~---~~~~~~~~ig~h~~~p~~~--- 150 (283)
T 4e12_A 77 DDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVG---YTGRGDKFLALHFANHVWV--- 150 (283)
T ss_dssp SCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHH---HHSCGGGEEEEEECSSTTT---
T ss_pred CCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHh---hcCCCcceEEEccCCCccc---
Confidence 67888999999999999987 55678999999999999876 567777655543 2233458999999988655
Q ss_pred HHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHHHHHHHHHHHHH
Q 013877 247 LYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTE 326 (434)
Q Consensus 247 ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~aliea~~~~~v~ 326 (434)
+-...+..+...+.+..+.+..++..+|...+.-. .+ .. -| +..-.+.+++..++..+.+
T Consensus 151 -----------~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~---~~-~~-g~----i~nr~~~~~~~ea~~l~~~ 210 (283)
T 4e12_A 151 -----------NNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELK---KE-KA-GY----VLNSLLVPLLDAAAELLVD 210 (283)
T ss_dssp -----------SCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECS---SC-CT-TT----THHHHHHHHHHHHHHHHHT
T ss_pred -----------CceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEe---cC-CC-CE----EehHHHHHHHHHHHHHHHh
Confidence 12234566777889999999999999996422110 11 11 11 1122233344445666666
Q ss_pred cCCCHHHHHHHHHHHH---HHHHHHHHHHhcHHHHHHh
Q 013877 327 NGMNEDLAYKNTVECI---TGIISKIISTQGMLAVYNS 361 (434)
Q Consensus 327 ~Gl~~e~A~~~~~e~l---~Gli~~li~e~G~~~m~~~ 361 (434)
.|.+|++.....-... .| --+++-..|++..++-
T Consensus 211 g~~~~~~id~~~~~~~g~~~G-p~~~~D~~Gld~~~~~ 247 (283)
T 4e12_A 211 GIADPETIDKTWRIGTGAPKG-PFEIFDIVGLTTAYNI 247 (283)
T ss_dssp TSCCHHHHHHHHHHHHCCSSC-HHHHHHHHCHHHHHHH
T ss_pred CCCCHHHHHHHHHhccCCCcC-HHHHHHhccHHHHHHH
Confidence 6789987554322211 14 3455566677555443
No 23
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.56 E-value=2.1e-14 Score=136.67 Aligned_cols=160 Identities=19% Similarity=0.164 Sum_probs=110.8
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCch--------------hHHHHHHcCccccCCCcC
Q 013877 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR--------------SFAEARAAGFTEENGTLG 170 (434)
Q Consensus 105 ~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~--------------s~~~A~~~G~~~~~~~~~ 170 (434)
...+.+ +||+|||+|+||.++|++|.++ |++|++++|..++ ..+.+.+.|... ..
T Consensus 14 ~~~~~~-~kIgiIG~G~mG~alA~~L~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 82 (245)
T 3dtt_A 14 NLYFQG-MKIAVLGTGTVGRTMAGALADL------GHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH----LA 82 (245)
T ss_dssp -----C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE----EE
T ss_pred ccccCC-CeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee----cc
Confidence 467777 9999999999999999999999 9999888876443 122222334332 46
Q ss_pred CHHhhhccCCEEEEeecchHHHHHHHHH-HhcCCCCcEEEEec-cc----------------h-hhhhhcccccCCCCcc
Q 013877 171 DIYETISGSDLVLLLISDAAQADNYEKI-FSCMKPNSILGLSH-GF----------------L-LGHLQSMGLDFPKNIG 231 (434)
Q Consensus 171 ~~~Ea~~~ADiViLavpd~a~~~vl~eI-~~~Lk~g~iL~~s~-G~----------------~-i~~~~~~~i~~~~di~ 231 (434)
+..|++++||+||+++|+..+.+++.++ .+.+ +|++|++++ |+ . ...+++ .+| +..
T Consensus 83 ~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~---~l~-~~~ 157 (245)
T 3dtt_A 83 AFADVAAGAELVVNATEGASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQR---TFP-EAK 157 (245)
T ss_dssp EHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHH---HST-TSE
T ss_pred CHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHH---HCC-CCe
Confidence 7889999999999999999999999888 7877 888877655 32 1 233433 344 469
Q ss_pred EEEeccCCChhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 232 VIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 232 VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
|++.+|+.++++....-.. -.|-..++.... +.++.+.+..++..+|..
T Consensus 158 vv~~~~~~~a~v~~~~~~a-----~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~ 206 (245)
T 3dtt_A 158 VVKTLNTMNASLMVDPGRA-----AGGDHSVFVSGN--DAAAKAEVATLLKSLGHQ 206 (245)
T ss_dssp EEECSTTSCHHHHHCGGGT-----GGGCCCEEEECS--CHHHHHHHHHHHHHTTCC
T ss_pred EEEeecccCHHHhcCcccc-----CCCCeeEEEECC--CHHHHHHHHHHHHHcCCC
Confidence 9999999999985311100 012222222122 578999999999999964
No 24
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.54 E-value=4.9e-14 Score=132.13 Aligned_cols=154 Identities=14% Similarity=0.102 Sum_probs=111.3
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~ 189 (434)
|+||+|||+|+||.++|++|.+. |++|++ +.|..++..+.+.+.|... ..+..++++++|+||+++|+.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~------g~~V~~v~~r~~~~~~~l~~~~g~~~----~~~~~~~~~~aDvVilavp~~ 92 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA------QIPAIIANSRGPASLSSVTDRFGASV----KAVELKDALQADVVILAVPYD 92 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT------TCCEEEECTTCGGGGHHHHHHHTTTE----EECCHHHHTTSSEEEEESCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCCHHHHHHHHHHhCCCc----ccChHHHHhcCCEEEEeCChH
Confidence 37999999999999999999999 998877 5555555555566667653 345567789999999999999
Q ss_pred HHHHHHHHHHhcCCCCcEEE-Eeccc--------------hhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccc
Q 013877 190 AQADNYEKIFSCMKPNSILG-LSHGF--------------LLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEI 254 (434)
Q Consensus 190 a~~~vl~eI~~~Lk~g~iL~-~s~G~--------------~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~ 254 (434)
.+.++++++.+ + ++++|+ .+.|+ ....+++ .+| +..|++++|+.|..... .|...
T Consensus 93 ~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~---~l~-~~~vv~~~~~~~~~v~~----~g~~~ 162 (220)
T 4huj_A 93 SIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSE---LVP-GAKVVKAFNTLPAAVLA----ADPDK 162 (220)
T ss_dssp GHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHH---HST-TCEEEEESCSSCHHHHT----SCSBC
T ss_pred HHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHH---HCC-CCCEEECCCCCCHHHhh----hCccc
Confidence 99999998877 5 567665 55566 3445544 444 56899999999988742 12111
Q ss_pred cCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 255 NGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 255 ~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
.+.+...+++ .. +.++.+.+..++..+|..
T Consensus 163 ~~~~~~v~~~-g~--~~~~~~~v~~l~~~~G~~ 192 (220)
T 4huj_A 163 GTGSRVLFLS-GN--HSDANRQVAELISSLGFA 192 (220)
T ss_dssp SSCEEEEEEE-ES--CHHHHHHHHHHHHHTTCE
T ss_pred CCCCeeEEEe-CC--CHHHHHHHHHHHHHhCCC
Confidence 1122333333 22 478999999999999964
No 25
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.53 E-value=1.7e-13 Score=133.30 Aligned_cols=194 Identities=16% Similarity=0.184 Sum_probs=129.1
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch-
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~- 189 (434)
|+||+|||+|+||.++|++|.+. |++|+++++. ....+...+.|+.. ..+.+|+++++|+||+++|+.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~d~~-~~~~~~~~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~ 71 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLV-QSAVDGLVAAGASA----ARSARDAVQGADVVISMLPASQ 71 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHHTTCEE----CSSHHHHHTTCSEEEECCSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhC------CCeEEEEcCC-HHHHHHHHHCCCeE----cCCHHHHHhCCCeEEEECCCHH
Confidence 48999999999999999999999 9998877665 44456666678775 578999999999999999855
Q ss_pred HHHHHHH---HHHhcCCCCcEEEEeccchhh---hhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEE
Q 013877 190 AQADNYE---KIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (434)
Q Consensus 190 a~~~vl~---eI~~~Lk~g~iL~~s~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~ali 263 (434)
...+++. ++.+.++++++|++.+..... .+.+ .....++.++. +|..++... ... |... +
T Consensus 72 ~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~--~~~~~g~~~~~-~pv~~~~~~---~~~-------g~l~-~ 137 (302)
T 2h78_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHA--AARERGLAMLD-APVSGGTAG---AAA-------GTLT-F 137 (302)
T ss_dssp HHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHH--HHHHTTCCEEE-CCEESCHHH---HHH-------TCEE-E
T ss_pred HHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHH--HHHHcCCEEEE-EEccCChhh---Hhc-------CCce-E
Confidence 4567887 799999999998876554322 2221 01123667887 587776642 122 2323 2
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhh-hhchHH----HHHHHHHHHHHHcCCCHHHHHHHH
Q 013877 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGI-LLGAVH----GIVESLFRRFTENGMNEDLAYKNT 338 (434)
Q Consensus 264 av~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tv-L~G~~~----aliea~~~~~v~~Gl~~e~A~~~~ 338 (434)
.+.. +.+..+.+..++..+|.. ++.. ... -.+...- +.+... +++.-++..+.+.|+++++.....
T Consensus 138 ~~~g--~~~~~~~~~~ll~~~g~~-~~~~---~~~---~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 208 (302)
T 2h78_A 138 MVGG--DAEALEKARPLFEAMGRN-IFHA---GPD---GAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIM 208 (302)
T ss_dssp EEES--CHHHHHHHHHHHHHHEEE-EEEE---EST---THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EeCC--CHHHHHHHHHHHHHhCCC-eEEc---CCc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 2233 678999999999999964 1111 011 1111111 122222 244445567889999998777643
No 26
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.52 E-value=6.6e-14 Score=134.39 Aligned_cols=153 Identities=12% Similarity=0.040 Sum_probs=107.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchHH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a~ 191 (434)
+||+|||+|+||.++|++|+++ |++|+.+++. ++ +++|| |+++|+.++
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~------G~~V~~~~~~-----------------------~~-~~~aD--ilavP~~ai 54 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSV------GHYVTVLHAP-----------------------ED-IRDFE--LVVIDAHGV 54 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHT------TCEEEECSSG-----------------------GG-GGGCS--EEEECSSCH
T ss_pred cEEEEEeeCHHHHHHHHHHHHC------CCEEEEecCH-----------------------HH-hccCC--EEEEcHHHH
Confidence 7999999999999999999999 9987654441 11 56789 999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEeccc-hhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeecCCCC
Q 013877 192 ADNYEKIFSCMKPNSILGLSHGF-LLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD 270 (434)
Q Consensus 192 ~~vl~eI~~~Lk~g~iL~~s~G~-~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~qdvs 270 (434)
.++++++.+++++|++|++++|. ....++. ..+.+..++..||.. |.+..+... +
T Consensus 55 ~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~---~~~~g~~fvg~HPm~------------------g~~~~i~a~---d 110 (232)
T 3dfu_A 55 EGYVEKLSAFARRGQMFLHTSLTHGITVMDP---LETSGGIVMSAHPIG------------------QDRWVASAL---D 110 (232)
T ss_dssp HHHHHHHHTTCCTTCEEEECCSSCCGGGGHH---HHHTTCEEEEEEEEE------------------TTEEEEEES---S
T ss_pred HHHHHHHHHhcCCCCEEEEECCcCHHHHHHH---HHhCCCcEEEeeeCC------------------CCceeeeCC---C
Confidence 99999999999999999987664 3332322 113467899999941 234434332 5
Q ss_pred HHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHHHHHHHHHHH
Q 013877 271 GRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRF 324 (434)
Q Consensus 271 g~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~aliea~~~~~ 324 (434)
.++++.+..|+..+|+. ++..+ ...-|.|++....+.-+.+++..+.+.+
T Consensus 111 ~~a~~~l~~L~~~lG~~-vv~~~---~~~hd~~~AAvsh~nhLv~L~~~A~~ll 160 (232)
T 3dfu_A 111 ELGETIVGLLVGELGGS-IVEIA---DDKRAQLAAALTYAGFLSTLQRDASYFL 160 (232)
T ss_dssp HHHHHHHHHHHHHTTCE-ECCCC---GGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCE-EEEeC---HHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999974 44342 3334467555444444445555554444
No 27
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.51 E-value=6.1e-13 Score=129.81 Aligned_cols=217 Identities=13% Similarity=0.117 Sum_probs=139.8
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHH-----------HHcCccccC-------------
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-----------RAAGFTEEN------------- 166 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A-----------~~~G~~~~~------------- 166 (434)
|+||+|||+|+||.++|.+|.++ |++|++.++..+ ..+.+ .+.|.....
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~------G~~V~~~d~~~~-~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~ 87 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT------GHTVVLVDQTED-ILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLST 87 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHH-HHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhc
Confidence 48999999999999999999999 999887766533 23322 123321000
Q ss_pred -CCcCCHHhhhccCCEEEEeecchHH--HHHHHHHHhcCCCCcEEE-EeccchhhhhhcccccCCCCccEEEeccCCChh
Q 013877 167 -GTLGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (434)
Q Consensus 167 -~~~~~~~Ea~~~ADiViLavpd~a~--~~vl~eI~~~Lk~g~iL~-~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~ 242 (434)
....+++|++++||+||+++|+... .++++++.++++++++|+ .++|+.+..+.. .++..-.++.+||..|..
T Consensus 88 i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~---~~~~~~~~~g~h~~~P~~ 164 (302)
T 1f0y_A 88 IATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIAN---ATTRQDRFAGLHFFNPVP 164 (302)
T ss_dssp EEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTT
T ss_pred eEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHH---hcCCcccEEEEecCCCcc
Confidence 0135777899999999999998653 478889999999998775 567887765544 233334799999998865
Q ss_pred hHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHHHHHHHHH
Q 013877 243 SVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFR 322 (434)
Q Consensus 243 ~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~aliea~~~ 322 (434)
. + ..+ .+......+.+..+.+..++..+|... +.. .+. . -| +..-.+.+++.-++.
T Consensus 165 ~-------~-----~~~--~i~~g~~~~~e~~~~~~~l~~~~G~~~-v~~---~~~-~-g~----i~nr~l~~~~~Ea~~ 220 (302)
T 1f0y_A 165 V-------M-----KLV--EVIKTPMTSQKTFESLVDFSKALGKHP-VSC---KDT-P-GF----IVNRLLVPYLMEAIR 220 (302)
T ss_dssp T-------C-----CEE--EEECCTTCCHHHHHHHHHHHHHTTCEE-EEE---CSC-T-TT----THHHHHHHHHHHHHH
T ss_pred c-------C-----ceE--EEeCCCCCCHHHHHHHHHHHHHcCCce-EEe---cCc-c-cc----cHHHHHHHHHHHHHH
Confidence 4 1 223 245566778899999999999999642 111 111 0 11 112223345666667
Q ss_pred HHHHcCCCHHHHHHHHHHHH---HHHHHHHHHHhcHHHHHHhc
Q 013877 323 RFTENGMNEDLAYKNTVECI---TGIISKIISTQGMLAVYNSF 362 (434)
Q Consensus 323 ~~v~~Gl~~e~A~~~~~e~l---~Gli~~li~e~G~~~m~~~v 362 (434)
.+.+.|+++++......... .| --.+.-..|++.+++..
T Consensus 221 l~~~g~~~~~~id~~~~~g~g~p~G-P~~~~D~~Gld~~~~~~ 262 (302)
T 1f0y_A 221 LYERGDASKEDIDTAMKLGAGYPMG-PFELLDYVGLDTTKFIV 262 (302)
T ss_dssp HHHTTSSCHHHHHHHHHHHHCCSSC-HHHHHHHHCHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHhCCCCCCC-HHHHHHHHHHHHHHHHH
Confidence 77777889887554322111 13 23455555665554443
No 28
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.51 E-value=1.2e-13 Score=136.36 Aligned_cols=95 Identities=15% Similarity=0.157 Sum_probs=82.3
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-chhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecc
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~-~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd 188 (434)
++||+|||+|+||.++|++|.+. |+ +|++++++. .+..+.+.+.|+.. ..+++|++++||+||+++|+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~------G~~~V~~~dr~~~~~~~~~~~~~g~~~----~~~~~e~~~~aDvVi~~vp~ 93 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA------GAIDMAAYDAASAESWRPRAEELGVSC----KASVAEVAGECDVIFSLVTA 93 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH------SCCEEEEECSSCHHHHHHHHHHTTCEE----CSCHHHHHHHCSEEEECSCT
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCCeEEEEcCCCCHHHHHHHHHCCCEE----eCCHHHHHhcCCEEEEecCc
Confidence 37999999999999999999999 99 888777752 45567777788875 57899999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEeccch
Q 013877 189 AAQADNYEKIFSCMKPNSILGLSHGFL 215 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~~s~G~~ 215 (434)
....++++++.+.++++++|++.+...
T Consensus 94 ~~~~~~~~~l~~~l~~~~ivvd~st~~ 120 (312)
T 3qsg_A 94 QAALEVAQQAGPHLCEGALYADFTSCS 120 (312)
T ss_dssp TTHHHHHHHHGGGCCTTCEEEECCCCC
T ss_pred hhHHHHHHhhHhhcCCCCEEEEcCCCC
Confidence 999999999999999999998877654
No 29
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.49 E-value=3.7e-13 Score=129.73 Aligned_cols=153 Identities=14% Similarity=0.102 Sum_probs=104.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCC--------CcCCHHhhhc---cC
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG--------TLGDIYETIS---GS 179 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~--------~~~~~~Ea~~---~A 179 (434)
|+||+|||+|+||.++|.+|.++ |++|++.+|+.+ ..+...+.|...... ...+..++.+ ++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG------GNDVTLIDQWPA-HIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQV 75 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC------CCcEEEEECCHH-HHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCC
Confidence 47999999999999999999999 999887766533 345555556542100 0113344444 89
Q ss_pred CEEEEeecchHHHHHHHHHHhcCCCCcEEE-Eeccchh-hhhhcccccCCCCccEEEe---------ccCCChhhHHHHH
Q 013877 180 DLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQSMGLDFPKNIGVIAV---------CPKGMGPSVRRLY 248 (434)
Q Consensus 180 DiViLavpd~a~~~vl~eI~~~Lk~g~iL~-~s~G~~i-~~~~~~~i~~~~di~VI~v---------~Pn~pg~~vr~ly 248 (434)
|+||+++|+....++++++.++++++++|+ .+.|+.. ..+.+ .+++. .++.. .|+.+...
T Consensus 76 d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~---~~~~~-~vi~g~~~~~~~~~~p~~~~~~----- 146 (316)
T 2ew2_A 76 DLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEK---YVPKE-NILVGITMWTAGLEGPGRVKLL----- 146 (316)
T ss_dssp SEEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTT---TSCGG-GEEEEEECCCCEEEETTEEEEC-----
T ss_pred CEEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHH---HcCCc-cEEEEEeeeeeEEcCCCEEEEe-----
Confidence 999999999988999999999999998776 4567764 34433 33333 55533 34333222
Q ss_pred hhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 249 ~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
+.|...+ .+....+.+..+.+..++..+|..
T Consensus 147 -------~~g~~~i-~~~~~~~~~~~~~~~~ll~~~g~~ 177 (316)
T 2ew2_A 147 -------GDGEIEL-ENIDPSGKKFALEVVDVFQKAGLN 177 (316)
T ss_dssp -------SCCCEEE-EESSGGGHHHHHHHHHHHHHTTCC
T ss_pred -------cCCcEEE-eecCCCccHHHHHHHHHHHhCCCC
Confidence 4677773 433344567888999999999964
No 30
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.48 E-value=2.6e-12 Score=134.31 Aligned_cols=211 Identities=12% Similarity=0.123 Sum_probs=139.9
Q ss_pred cchhhccCCccccccc-----cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchh-------HHHH
Q 013877 90 DEYIVRGGRDLFNLLP-----DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-------FAEA 157 (434)
Q Consensus 90 ~e~~~~~~~~~f~~~~-----~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s-------~~~A 157 (434)
.|..++ +|..|... ..-..++||+|||+|.||.+||++|.++ |++|++.+++.++. .+.+
T Consensus 30 a~~~~~--~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~a------G~~V~l~D~~~e~a~~~i~~~l~~~ 101 (460)
T 3k6j_A 30 AHSLAG--QWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLA------GIETFLVVRNEQRCKQELEVMYARE 101 (460)
T ss_dssp TTCCTT--SCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred HHHhhc--cccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHC------CCeEEEEECcHHHHHHHHHHHHHHH
Confidence 444444 67666331 1223348999999999999999999999 99998877664421 2334
Q ss_pred HHcCcccc-------C--CCcCCHHhhhccCCEEEEeecchHH--HHHHHHHHhcCCCCcEEE-Eeccchhhhhhccccc
Q 013877 158 RAAGFTEE-------N--GTLGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLD 225 (434)
Q Consensus 158 ~~~G~~~~-------~--~~~~~~~Ea~~~ADiViLavpd~a~--~~vl~eI~~~Lk~g~iL~-~s~G~~i~~~~~~~i~ 225 (434)
.+.|.... + ....++ +++++||+||.++|.... .+++.+|.+.++++++|+ .++++.+..+.+ .
T Consensus 102 ~~~G~l~~~~~~~~~~~i~~t~dl-~al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~---~ 177 (460)
T 3k6j_A 102 KSFKRLNDKRIEKINANLKITSDF-HKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISS---V 177 (460)
T ss_dssp HHTTSCCHHHHHHHHTTEEEESCG-GGCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHT---T
T ss_pred HHcCCCCHHHHHHHhcceEEeCCH-HHHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHH---h
Confidence 44453210 0 013455 478999999999997543 478899999999999885 667887766654 3
Q ss_pred CCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccc
Q 013877 226 FPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGE 305 (434)
Q Consensus 226 ~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge 305 (434)
.+...+++.+||..|.+.+ ... -+.+....+.+.++.+..++..+|...+. . .+ ..
T Consensus 178 ~~~p~r~iG~HffnPv~~m-------------~Lv-EIv~g~~Ts~e~~~~~~~l~~~lGk~~v~-v---~d--~p---- 233 (460)
T 3k6j_A 178 LRDPSNLVGIHFFNPANVI-------------RLV-EIIYGSHTSSQAIATAFQACESIKKLPVL-V---GN--CK---- 233 (460)
T ss_dssp SSSGGGEEEEECCSSTTTC-------------CEE-EEECCSSCCHHHHHHHHHHHHHTTCEEEE-E---SS--CC----
T ss_pred ccCCcceEEEEecchhhhC-------------CEE-EEEeCCCCCHHHHHHHHHHHHHhCCEEEE-E---ec--cc----
Confidence 3334589999998887651 122 25567778899999999999999974211 1 11 11
Q ss_pred hhhhhchHH-HHHHHHHHHHHHcCCCHHHHHHH
Q 013877 306 RGILLGAVH-GIVESLFRRFTENGMNEDLAYKN 337 (434)
Q Consensus 306 ~tvL~G~~~-aliea~~~~~v~~Gl~~e~A~~~ 337 (434)
+-+++-+. +++..++..+.+.|.++++....
T Consensus 234 -Gfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a 265 (460)
T 3k6j_A 234 -SFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKI 265 (460)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 11222222 34444555566899999987764
No 31
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.48 E-value=4.8e-13 Score=129.49 Aligned_cols=196 Identities=16% Similarity=0.113 Sum_probs=128.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecc-hH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD-AA 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd-~a 190 (434)
+||+|||+|+||.++|++|.+. |++|++++|+.+ ..+...+.|+.. ..+.+|+++++|+||+++|+ ..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~-~~~~~~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~~ 70 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA------GCSVTIWNRSPE-KAEELAALGAER----AATPCEVVESCPVTFAMLADPAA 70 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG-GGHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCeEEEEcCCHH-HHHHHHHCCCee----cCCHHHHHhcCCEEEEEcCCHHH
Confidence 7999999999999999999999 999987776644 455566678775 67899999999999999995 56
Q ss_pred HHHHH---HHHHhcCCCCcEEEEeccchhhhhhcc-cccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeec
Q 013877 191 QADNY---EKIFSCMKPNSILGLSHGFLLGHLQSM-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (434)
Q Consensus 191 ~~~vl---~eI~~~Lk~g~iL~~s~G~~i~~~~~~-~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~ 266 (434)
..+++ +++.+.+++|++|++..+......... ......++.++. +|-..+... ... |...+++ .
T Consensus 71 ~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~---a~~-------g~l~~~~-g 138 (287)
T 3pef_A 71 AEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE-APVSGSKKP---AED-------GTLIILA-A 138 (287)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHH---HHH-------TCEEEEE-E
T ss_pred HHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHH---Hhc-------CCEEEEE-e
Confidence 67888 789999999999988877643221110 001123566765 774443331 122 3333233 3
Q ss_pred CCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchh-hhhchHHH----HHHHHHHHHHHcCCCHHHHHHHHH
Q 013877 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG-ILLGAVHG----IVESLFRRFTENGMNEDLAYKNTV 339 (434)
Q Consensus 267 qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~t-vL~G~~~a----liea~~~~~v~~Gl~~e~A~~~~~ 339 (434)
. +.+..+.+..++..+|.. ++... .... ++.. .+.+...+ ++.-++..+.+.|+++++.+...-
T Consensus 139 g--~~~~~~~~~~ll~~~g~~-~~~~g---~~g~---~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~ 207 (287)
T 3pef_A 139 G--DRNLYDEAMPGFEKMGKK-IIHLG---DVGK---GAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIG 207 (287)
T ss_dssp E--CHHHHHHHHHHHHHHEEE-EEECS---STTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHhCCC-eEEeC---CCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 3 467889999999999964 21111 1101 1111 11222222 334456678899999998877443
No 32
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.46 E-value=8.2e-13 Score=129.87 Aligned_cols=196 Identities=15% Similarity=0.077 Sum_probs=126.7
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch-
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~- 189 (434)
|+||+|||+|+||.++|++|.+. |++|++++|..++ .+.+.+.|... ..+..|+++++|+||+++|+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~~-~~~l~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~ 89 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN------GFKVTVWNRTLSK-CDELVEHGASV----CESPAEVIKKCKYTIAMLSDPC 89 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGGG-GHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHHCCCeE----cCCHHHHHHhCCEEEEEcCCHH
Confidence 38999999999999999999999 9999887766444 45556678765 578999999999999999975
Q ss_pred HHHHHH---HHHHhcCCCCcEEEEeccchhhhhhcc-cccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEee
Q 013877 190 AQADNY---EKIFSCMKPNSILGLSHGFLLGHLQSM-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (434)
Q Consensus 190 a~~~vl---~eI~~~Lk~g~iL~~s~G~~i~~~~~~-~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav 265 (434)
...+++ +++.+.+++|++|+++++......... ......++.++. +|-..+... -.. |...+++
T Consensus 90 ~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~~---a~~-------g~l~i~~- 157 (310)
T 3doj_A 90 AALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE-GPVSGSKKP---AED-------GQLIILA- 157 (310)
T ss_dssp HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHH---HHH-------TCEEEEE-
T ss_pred HHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChhH---Hhc-------CCeEEEE-
Confidence 556788 678899999999998877643221110 001123566665 663322221 122 3433333
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhh-hchHH----HHHHHHHHHHHHcCCCHHHHHHHH
Q 013877 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGIL-LGAVH----GIVESLFRRFTENGMNEDLAYKNT 338 (434)
Q Consensus 266 ~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL-~G~~~----aliea~~~~~v~~Gl~~e~A~~~~ 338 (434)
.. +.+..+.+..++..+|.. ++... +... ++..-+ .+... +++.-++..+.+.|+++++.+...
T Consensus 158 gg--~~~~~~~~~~ll~~~g~~-~~~~g---~~g~---a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~ 226 (310)
T 3doj_A 158 AG--DKALFEESIPAFDVLGKR-SFYLG---QVGN---GAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDIL 226 (310)
T ss_dssp EE--CHHHHHHHHHHHHHHEEE-EEECS---STTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred cC--CHHHHHHHHHHHHHhCCC-EEEeC---CcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 33 468899999999999963 11110 1100 111111 22221 233335567789999999887743
No 33
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.44 E-value=9.6e-13 Score=127.36 Aligned_cols=198 Identities=15% Similarity=0.075 Sum_probs=126.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch-
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~- 189 (434)
|+||+|||+|+||.++|++|.+. |++|++++|+.++ .+...+.|... ..+.+|+++++|+||+++|+.
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~----~~~~~~~~~~advvi~~v~~~~ 69 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA------GFDVTVWNRNPAK-CAPLVALGARQ----ASSPAEVCAACDITIAMLADPA 69 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH------TCCEEEECSSGGG-GHHHHHHTCEE----CSCHHHHHHHCSEEEECCSSHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHC------CCeEEEEcCCHHH-HHHHHHCCCee----cCCHHHHHHcCCEEEEEcCCHH
Confidence 57999999999999999999999 9999887776444 45555567765 578999999999999999986
Q ss_pred HHHHHH---HHHHhcCCCCcEEEEeccchhhhhhcc-cccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEee
Q 013877 190 AQADNY---EKIFSCMKPNSILGLSHGFLLGHLQSM-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (434)
Q Consensus 190 a~~~vl---~eI~~~Lk~g~iL~~s~G~~i~~~~~~-~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav 265 (434)
...+++ +++.+.+++|++|++++.......... ......++.++.. |...+.. .... |...+++
T Consensus 70 ~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~---~a~~-------g~l~~~~- 137 (287)
T 3pdu_A 70 AAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEA-PVSGTKK---PAED-------GTLIILA- 137 (287)
T ss_dssp HHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC-CEECCHH---HHHH-------TCEEEEE-
T ss_pred HHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEC-CccCCHH---HHhc-------CCEEEEE-
Confidence 556788 778999999999988776543211100 0011235566653 5332222 1122 3433232
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchh-hhhchHH----HHHHHHHHHHHHcCCCHHHHHHHHHH
Q 013877 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG-ILLGAVH----GIVESLFRRFTENGMNEDLAYKNTVE 340 (434)
Q Consensus 266 ~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~t-vL~G~~~----aliea~~~~~v~~Gl~~e~A~~~~~e 340 (434)
.. +.+..+.+..++..+|.. ++... ... -+... .+.+... +++.-++..+.+.|+++++.+...-+
T Consensus 138 gg--~~~~~~~~~~ll~~~g~~-~~~~g---~~g---~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~ 208 (287)
T 3pdu_A 138 AG--DQSLFTDAGPAFAALGKK-CLHLG---EVG---QGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDA 208 (287)
T ss_dssp EE--CHHHHHHTHHHHHHHEEE-EEECS---STT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred eC--CHHHHHHHHHHHHHhCCC-EEEcC---CCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 33 468889999999999963 11110 000 01111 1122222 23333456788999999988875544
No 34
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.44 E-value=5.3e-13 Score=131.39 Aligned_cols=197 Identities=12% Similarity=0.122 Sum_probs=118.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchHH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a~ 191 (434)
+||||||+|+||.+||+||.++ |++|++++|+.++ .+...+.|... +.++.|+++++|+||+++|+..+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~------G~~V~v~dr~~~~-~~~l~~~G~~~----~~s~~e~~~~~dvvi~~l~~~~~ 74 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA------GYELVVWNRTASK-AEPLTKLGATV----VENAIDAITPGGIVFSVLADDAA 74 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEC--------CTTTTTTCEE----CSSGGGGCCTTCEEEECCSSHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHHcCCeE----eCCHHHHHhcCCceeeeccchhh
Confidence 6899999999999999999999 9999888776444 44445667775 67899999999999999998877
Q ss_pred H-HHH-HHHHhcCCCCcEEEEeccchhhhhhcc-cccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeecCC
Q 013877 192 A-DNY-EKIFSCMKPNSILGLSHGFLLGHLQSM-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQD 268 (434)
Q Consensus 192 ~-~vl-~eI~~~Lk~g~iL~~s~G~~i~~~~~~-~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~qd 268 (434)
. +++ .++.+.+++|+++++.+-......++. ......++.++- +|-.-++. .-+. |-..++ +..
T Consensus 75 ~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ld-apVsGg~~---~a~~-------g~l~im-~gG- 141 (297)
T 4gbj_A 75 VEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVG-APIFARPE---AVRA-------KVGNIC-LSG- 141 (297)
T ss_dssp HHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHH---HHHH-------TCCEEE-EEE-
T ss_pred HHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceec-CCcCCCcc---cccc-------ccceee-ccc-
Confidence 5 454 468889999999988876543211110 011124666663 44222221 1112 333322 333
Q ss_pred CCHHHHHHHHHHHHHhCCCcccccchhhhccc---ccccchhhhhchHHHHHHHHHHHHHHcCCCHHHHHHH
Q 013877 269 VDGRATNVALGWSVALGSPFTFATTLEQEYRS---DIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKN 337 (434)
Q Consensus 269 vsg~a~e~a~~la~aiG~~~~iettf~~E~~~---Dlfge~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~~ 337 (434)
+.++.+.++.++..+|.. ++.. -...-. -.+-.+.++.+...++.| ++..+.+.|++++..+..
T Consensus 142 -~~~~~~~~~~~l~~~g~~-i~~~--g~~~G~g~~~Kl~~N~~~~~~~~~~aE-a~~la~~~Gld~~~~~~~ 208 (297)
T 4gbj_A 142 -NAGAKERIKPIVENFVKG-VFDF--GDDPGAANVIKLAGNFMIACSLEMMGE-AFTMAEKNGISRQSIYEM 208 (297)
T ss_dssp -CHHHHHHHHHHHHTTCSE-EEEC--CSCTTHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTTCCHHHHHHH
T ss_pred -chhHHHHHHHHHHHhhCC-eEEe--cCCccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHH
Confidence 468899999999999963 1100 000000 000011111122222333 345688999999987774
No 35
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.44 E-value=1e-12 Score=128.42 Aligned_cols=198 Identities=16% Similarity=0.133 Sum_probs=126.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH-
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a- 190 (434)
+||+|||+|+||.++|++|.+. |++|++++|. ....+.+.+.|... ...+++|+++++|+||+++|+..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~-~~~~~~~~~~g~~~---~~~~~~e~~~~aDvvi~~vp~~~~ 77 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA------GLSTWGADLN-PQACANLLAEGACG---AAASAREFAGVVDALVILVVNAAQ 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCSE---EESSSTTTTTTCSEEEECCSSHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHcCCcc---ccCCHHHHHhcCCEEEEECCCHHH
Confidence 7899999999999999999999 9998877665 44455666667652 03578899999999999999864
Q ss_pred HHHHH---HHHHhcCCCCcEEEEeccchhhh---hhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEe
Q 013877 191 QADNY---EKIFSCMKPNSILGLSHGFLLGH---LQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (434)
Q Consensus 191 ~~~vl---~eI~~~Lk~g~iL~~s~G~~i~~---~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~alia 264 (434)
...++ +++.+.+++|++|++.+...... +.+ .....++.++. +|-..+... -. .|...+++
T Consensus 78 ~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~~---a~-------~g~l~~~~ 144 (303)
T 3g0o_A 78 VRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAA--ALTALNLNMLD-APVSGGAVK---AA-------QGEMTVMA 144 (303)
T ss_dssp HHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHH--HHHTTTCEEEE-CCEESCHHH---HH-------TTCEEEEE
T ss_pred HHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHH--HHHHcCCeEEe-CCCCCChhh---hh-------cCCeEEEe
Confidence 45676 67889999999998887654321 111 11123667776 784443331 12 34444333
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCcccccc--hhhhcccccccchhhhhchHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 013877 265 VHQDVDGRATNVALGWSVALGSPFTFATT--LEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNT 338 (434)
Q Consensus 265 v~qdvsg~a~e~a~~la~aiG~~~~iett--f~~E~~~Dlfge~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~~~ 338 (434)
.. +.+..+.+..++..+|.. ++... ...-... .+.... +.+...+++.-++..+.+.|+++++.+...
T Consensus 145 -gg--~~~~~~~~~~ll~~~g~~-~~~~~~~~g~a~~~-Kl~~N~-~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~ 214 (303)
T 3g0o_A 145 -SG--SEAAFTRLKPVLDAVASN-VYRISDTPGAGSTV-KIIHQL-LAGVHIAAAAEAMALAARAGIPLDVMYDVV 214 (303)
T ss_dssp -EC--CHHHHHHHHHHHHHHEEE-EEEEESSTTHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred -CC--CHHHHHHHHHHHHHHCCC-EEECCCCCcHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 33 478899999999999963 21111 0000000 011111 111122233334557889999999887744
No 36
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.43 E-value=5.9e-13 Score=128.47 Aligned_cols=200 Identities=15% Similarity=0.058 Sum_probs=119.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch-H
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~-a 190 (434)
+||+|||+|+||.++|++|.+. |++|+++++..+ ..+...+.|+.. ..+.+++++++|+||+++|+. .
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~V~~~~~~~~-~~~~~~~~g~~~----~~~~~~~~~~~Dvvi~~vp~~~~ 69 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH------GYPLIIYDVFPD-ACKEFQDAGEQV----VSSPADVAEKADRIITMLPTSIN 69 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT------TCCEEEECSSTH-HHHHHHTTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHcCCee----cCCHHHHHhcCCEEEEeCCCHHH
Confidence 4799999999999999999998 998877766543 345555667764 568889999999999999755 5
Q ss_pred HHHHHHH---HHhcCCCCcEEEEeccchhhhhhcccccCC-CCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeec
Q 013877 191 QADNYEK---IFSCMKPNSILGLSHGFLLGHLQSMGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (434)
Q Consensus 191 ~~~vl~e---I~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~-~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~ 266 (434)
..+++.+ +.+.+++|++|+..+|+.........-.++ .++. +|+.|...-...... |...++ +.
T Consensus 70 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~----~~~~p~~~g~~~a~~-------~~~~~~-~~ 137 (296)
T 2gf2_A 70 AIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAV----FMDAPVSGGVGAARS-------GNLTFM-VG 137 (296)
T ss_dssp HHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE----EEECCEESHHHHHHH-------TCEEEE-EE
T ss_pred HHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE----EEEcCCCCChhHHhc-------CcEEEE-eC
Confidence 5677775 456789999888888876543221000111 1222 233333221112222 344433 33
Q ss_pred CCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 013877 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNT 338 (434)
Q Consensus 267 qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~~~ 338 (434)
. +.+..+.+..++..+|.. ++.+........-.+............+.|++. .+.+.|+++++++...
T Consensus 138 ~--~~~~~~~v~~l~~~~g~~-~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~-~~~~~G~~~~~~~~~~ 205 (296)
T 2gf2_A 138 G--VEDEFAAAQELLGCMGSN-VVYCGAVGTGQAAKICNNMLLAISMIGTAEAMN-LGIRLGLDPKLLAKIL 205 (296)
T ss_dssp S--CGGGHHHHHHHHTTTEEE-EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHHcCC-eEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHH
Confidence 2 567889999999999963 111100000000000000011111123555554 8899999998777643
No 37
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.43 E-value=7.9e-13 Score=129.29 Aligned_cols=200 Identities=17% Similarity=0.112 Sum_probs=126.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeec-chH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS-DAA 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavp-d~a 190 (434)
+||+|||+|+||.++|++|.+. |++|+++++...+ .+...+.|... ..+..++++++|+||+++| +..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~------g~~V~~~~~~~~~-~~~~~~~g~~~----~~~~~~~~~~~DvVi~av~~~~~ 99 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM------GHTVTVWNRTAEK-CDLFIQEGARL----GRTPAEVVSTCDITFACVSDPKA 99 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSGGG-GHHHHHTTCEE----CSCHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhC------CCEEEEEeCCHHH-HHHHHHcCCEE----cCCHHHHHhcCCEEEEeCCCHHH
Confidence 7899999999999999999998 9988777665443 44455567764 5678899999999999999 666
Q ss_pred HHHHHHHH---HhcCCCCcEEEEeccchh---hhhhcccccC-CCCccEEEeccCCChhhHHHHHhhcccccCCCceEEE
Q 013877 191 QADNYEKI---FSCMKPNSILGLSHGFLL---GHLQSMGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (434)
Q Consensus 191 ~~~vl~eI---~~~Lk~g~iL~~s~G~~i---~~~~~~~i~~-~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~ali 263 (434)
..+++.++ .+.++++++|++.+.... ..+.+ .+ ..++.++.. |. ++... ... .|...++
T Consensus 100 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~---~~~~~~~~~v~~-p~-~g~~~--~~~-------~g~~~~~ 165 (316)
T 2uyy_A 100 AKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQ---VIVSRGGRFLEA-PV-SGNQQ--LSN-------DGMLVIL 165 (316)
T ss_dssp HHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHH---HHHHTTCEEEEC-CE-ESCHH--HHH-------HTCEEEE
T ss_pred HHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCEEEEc-Cc-cCChh--HHh-------hCCEEEE
Confidence 67788753 478899998886665432 22222 11 134566643 42 22111 112 2444433
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 013877 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-IVESLFRRFTENGMNEDLAYKNTVECI 342 (434)
Q Consensus 264 av~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~a-liea~~~~~v~~Gl~~e~A~~~~~e~l 342 (434)
. .. +.+..+.+..++..+|....+.... +......-....++|+... +.|++ ..+++.|+++++++....++.
T Consensus 166 ~-~g--~~~~~~~v~~ll~~~g~~~~~~~~~--~~~~~~K~~~n~~~~~~~~~~~Ea~-~la~~~G~~~~~~~~~~~~~~ 239 (316)
T 2uyy_A 166 A-AG--DRGLYEDCSSCFQAMGKTSFFLGEV--GNAAKMMLIVNMVQGSFMATIAEGL-TLAQVTGQSQQTLLDILNQGQ 239 (316)
T ss_dssp E-EE--CHHHHHHTHHHHHHHEEEEEECSST--THHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTCCHHHHHHHHHHST
T ss_pred e-CC--CHHHHHHHHHHHHHhcCCEEEeCCC--CHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHcCC
Confidence 2 33 4678888999999999642111110 0000011122345555444 55554 448999999998888666554
No 38
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.42 E-value=4.4e-12 Score=133.11 Aligned_cols=213 Identities=12% Similarity=0.148 Sum_probs=140.6
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-----------cCccccC---------CCcC
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEEN---------GTLG 170 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~~---------~~~~ 170 (434)
++||+|||+|+||.++|.+|.++ |++|++.+++ ....+.+.+ .|..... ....
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a------G~~V~l~D~~-~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH------GHQVLLYDIS-AEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVT 77 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSC-HHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeC
Confidence 37999999999999999999999 9998877665 333444332 3321000 0123
Q ss_pred CHHhhhccCCEEEEeecchHH--HHHHHHHHhcCCCCcEE-EEeccchhhhhhcccccCCCCccEEEeccCCChhhHHHH
Q 013877 171 DIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSIL-GLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (434)
Q Consensus 171 ~~~Ea~~~ADiViLavpd~a~--~~vl~eI~~~Lk~g~iL-~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~l 247 (434)
+. +++++||+||+++|+... .+++.++.+.++++++| +.++++.+..+.. ..+...+++.+||..|.+..
T Consensus 78 ~~-~~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~---~~~~p~~~ig~hf~~Pa~v~--- 150 (483)
T 3mog_A 78 DI-HALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAA---EIKNPERVAGLHFFNPAPVM--- 150 (483)
T ss_dssp CG-GGGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTT---TSSSGGGEEEEEECSSTTTC---
T ss_pred CH-HHhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHH---HccCccceEEeeecChhhhC---
Confidence 45 478999999999998854 47899999999999988 5788888876544 33344589999999998872
Q ss_pred HhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhc-hHHHHHHHHHHHHHH
Q 013877 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLG-AVHGIVESLFRRFTE 326 (434)
Q Consensus 248 y~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G-~~~aliea~~~~~v~ 326 (434)
.... +..+...+.+..+.+..++..+|...+ .. .+. . +-+++ .+.+++..++..+.+
T Consensus 151 ----------~Lve-vv~g~~Ts~e~~~~~~~l~~~lGk~~v-~v---~d~--~-----Gfi~Nr~l~~~~~Ea~~l~~~ 208 (483)
T 3mog_A 151 ----------KLVE-VVSGLATAAEVVEQLCELTLSWGKQPV-RC---HST--P-----GFIVNRVARPYYSEAWRALEE 208 (483)
T ss_dssp ----------CEEE-EEECSSCCHHHHHHHHHHHHHTTCEEE-EE---ESC--T-----TTTHHHHTHHHHHHHHHHHHT
T ss_pred ----------CeEE-EecCCCCCHHHHHHHHHHHHHhCCEEE-EE---ecc--C-----cchHHHHHHHHHHHHHHHHHh
Confidence 2333 556777889999999999999996421 11 111 0 11222 222355556666777
Q ss_pred cCCCHHHHHHHHHHHH---HHHHHHHHHHhcHHHHHH
Q 013877 327 NGMNEDLAYKNTVECI---TGIISKIISTQGMLAVYN 360 (434)
Q Consensus 327 ~Gl~~e~A~~~~~e~l---~Gli~~li~e~G~~~m~~ 360 (434)
.|.++++.....-... .| --.++-..|++..+.
T Consensus 209 g~~~~~~id~a~~~~~G~p~G-P~~l~D~~Gld~~~~ 244 (483)
T 3mog_A 209 QVAAPEVIDAALRDGAGFPMG-PLELTDLIGQDVNFA 244 (483)
T ss_dssp TCSCHHHHHHHHHHTTCCSSC-HHHHHHHHCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCCCCC-HHHHHHHhchHHHHH
Confidence 7778887665322111 13 344555567654443
No 39
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.41 E-value=2e-12 Score=135.43 Aligned_cols=191 Identities=14% Similarity=0.114 Sum_probs=124.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc---CccccCCCcCCHHhhhcc---CCEEEEe
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISG---SDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~---G~~~~~~~~~~~~Ea~~~---ADiViLa 185 (434)
++|+|||+|+||.++|++|.++ |++|.+++|+.++..+..... |+.. ..+++|++++ +|+||++
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~------G~~V~v~~r~~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvVil~ 85 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR------GYTVSIFNRSREKTEEVIAENPGKKLVP----YYTVKEFVESLETPRRILLM 85 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHHHHHHHHHHSTTSCEEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred CeEEEEccHHHHHHHHHHHHhC------CCeEEEEeCCHHHHHHHHhhCCCCCeEE----eCCHHHHHhCCCCCCEEEEE
Confidence 7899999999999999999999 999988877654433333332 6664 5688898887 9999999
Q ss_pred ecc-hHHHHHHHHHHhcCCCCcEEEEec-cchh--hhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceE
Q 013877 186 ISD-AAQADNYEKIFSCMKPNSILGLSH-GFLL--GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (434)
Q Consensus 186 vpd-~a~~~vl~eI~~~Lk~g~iL~~s~-G~~i--~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~a 261 (434)
||+ ....++++++.+.+++|++|++.. |... ..+.+ . ....++.++ .+|...++.. ... |. .
T Consensus 86 Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~-~-l~~~g~~~v-~~pv~gg~~~---a~~-------g~-~ 151 (480)
T 2zyd_A 86 VKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNR-E-LSAEGFNFI-GTGVSGGEEG---ALK-------GP-S 151 (480)
T ss_dssp SCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH-H-HHHTTCEEE-EEEEESHHHH---HHH-------CC-E
T ss_pred CCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH-H-HHHCCCCee-CCccccCHhH---Hhc-------CC-e
Confidence 999 577899999999999999887554 4421 22222 0 112356676 4576555441 222 34 3
Q ss_pred EEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHH-----------HHHHHHHHH---HHH-
Q 013877 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVH-----------GIVESLFRR---FTE- 326 (434)
Q Consensus 262 liav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~-----------aliea~~~~---~v~- 326 (434)
+.+.. +.++.+.+..++..+|.... . -|+.....++ .|..+ .++.++.|. +++
T Consensus 152 -i~~gg--~~~~~~~v~~ll~~~g~~~~-d----Ge~~v~~~g~----~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~ 219 (480)
T 2zyd_A 152 -IMPGG--QKEAYELVAPILTKIAAVAE-D----GEPCVTYIGA----DGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGG 219 (480)
T ss_dssp -EEEES--CHHHHHHHHHHHHHHSCBCT-T----SCBSBCCCBS----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -EEecC--CHHHHHHHHHHHHHHhcccc-C----CCceEEEECC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33344 47889999999999996300 0 0000112222 12222 134444444 788
Q ss_pred cCCCHHHHHHHH
Q 013877 327 NGMNEDLAYKNT 338 (434)
Q Consensus 327 ~Gl~~e~A~~~~ 338 (434)
.|++++++....
T Consensus 220 lGl~~~~~~~l~ 231 (480)
T 2zyd_A 220 LNLTNEELAQTF 231 (480)
T ss_dssp HCCCHHHHHHHH
T ss_pred cCCCHHHHHHHH
Confidence 599999888755
No 40
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.41 E-value=1.5e-11 Score=121.50 Aligned_cols=203 Identities=13% Similarity=0.081 Sum_probs=133.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc-------CccccCCCcCCHHhhhccCCEEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------GFTEENGTLGDIYETISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~-------G~~~~~~~~~~~~Ea~~~ADiViL 184 (434)
|||+|||+|.||.+||++|. + |++|++++++ ....+.+.+. ++.. ..++++ +++||+||.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a------G~~V~v~d~~-~~~~~~~~~~l~~~~~~~i~~----~~~~~~-~~~aDlVie 79 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S------KHEVVLQDVS-EKALEAAREQIPEELLSKIEF----TTTLEK-VKDCDIVME 79 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSC-HHHHHHHHHHSCGGGGGGEEE----ESSCTT-GGGCSEEEE
T ss_pred CeEEEEeeCHHHHHHHHHHH-c------CCEEEEEECC-HHHHHHHHHHHHHHHhCCeEE----eCCHHH-HcCCCEEEE
Confidence 89999999999999999999 9 9999877765 3445566555 5543 345665 899999999
Q ss_pred eecchHHH--HHHHHHHhcCCCCcEEE-EeccchhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceE
Q 013877 185 LISDAAQA--DNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (434)
Q Consensus 185 avpd~a~~--~vl~eI~~~Lk~g~iL~-~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~a 261 (434)
++|+.... .++.++.+. ++++|+ .++++.+..+.. .......++.+||--|.+. +-..
T Consensus 80 avpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~---~~~~~~r~~G~Hf~~Pv~~--------------~~lv 140 (293)
T 1zej_A 80 AVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAE---RLDSPSRFLGVHWMNPPHV--------------MPLV 140 (293)
T ss_dssp CCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTTT--------------CCEE
T ss_pred cCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHH---HhhcccceEeEEecCcccc--------------CCEE
Confidence 99988763 577777665 898885 667777765543 2222347999999776533 2333
Q ss_pred EEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 013877 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVEC 341 (434)
Q Consensus 262 liav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~~~~e~ 341 (434)
.+.+....+.+..+.+..++..+|.. ++.. .+. ...-+ ++ .+.+.|++. .+.+ |+++++.....-..
T Consensus 141 eiv~g~~t~~~~~~~~~~l~~~lGk~-~v~v---~d~---fi~Nr-ll---~~~~~EA~~-l~~~-Gv~~e~id~~~~~g 207 (293)
T 1zej_A 141 EIVISRFTDSKTVAFVEGFLRELGKE-VVVC---KGQ---SLVNR-FN---AAVLSEASR-MIEE-GVRAEDVDRVWKHH 207 (293)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHTTCE-EEEE---ESS---CHHHH-HH---HHHHHHHHH-HHHH-TCCHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHHHcCCe-EEEe---ccc---ccHHH-HH---HHHHHHHHH-HHHh-CCCHHHHHHHHHhc
Confidence 45567677889999999999999964 1111 111 11111 11 133555544 3444 99998766633211
Q ss_pred ----H--HHHHHHHHHHhcHHHHHH
Q 013877 342 ----I--TGIISKIISTQGMLAVYN 360 (434)
Q Consensus 342 ----l--~Gli~~li~e~G~~~m~~ 360 (434)
. .| --+++-..|++..++
T Consensus 208 ~g~~~~~~G-P~~l~D~~Gld~~~~ 231 (293)
T 1zej_A 208 LGLLYTLFG-PLGNLDYIGLDVAYY 231 (293)
T ss_dssp HHHHHHHHH-HHHHHHHHCHHHHHH
T ss_pred CCCCCCCCC-HHHHHHHhchHHHHH
Confidence 1 24 345666677755443
No 41
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.41 E-value=7.9e-12 Score=122.74 Aligned_cols=209 Identities=15% Similarity=0.048 Sum_probs=129.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH-
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a- 190 (434)
+||+|||+|+||.++|++|.+. |++|++++|+. ...+.+.+.|... ..+++|+++++|+||+++|+..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~------G~~V~~~dr~~-~~~~~~~~~g~~~----~~~~~e~~~~aDvVi~~vp~~~~ 78 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ------GKRVAIWNRSP-GKAAALVAAGAHL----CESVKAALSASPATIFVLLDNHA 78 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSH-HHHHHHHHHTCEE----CSSHHHHHHHSSEEEECCSSHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHCCCee----cCCHHHHHhcCCEEEEEeCCHHH
Confidence 8999999999999999999999 99988776654 4455555668764 5789999999999999999876
Q ss_pred HHHHHH--HHHhcCCCCcEEEEeccchhh---hhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEee
Q 013877 191 QADNYE--KIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (434)
Q Consensus 191 ~~~vl~--eI~~~Lk~g~iL~~s~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav 265 (434)
..+++. .+.+ +++|++|++++..... .+.+ .....++.++.. |-..++.. .+. .+... + +
T Consensus 79 ~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~--~~~~~g~~~vda-pv~g~~~~-----~~~----~~~~i-~-~ 143 (306)
T 3l6d_A 79 THEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQG--LVNQAGGHYVKG-MIVAYPRN-----VGH----RESHS-I-H 143 (306)
T ss_dssp HHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHH--HHHHTTCEEEEE-EEESCGGG-----TTC----TTCEE-E-E
T ss_pred HHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEec-ccccCccc-----ccC----CceEE-E-E
Confidence 567776 5644 5789999888765432 1111 011245677753 53322211 110 12322 2 3
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCcccccchhhhccc-ccccchhhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-
Q 013877 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRS-DIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECIT- 343 (434)
Q Consensus 266 ~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~-Dlfge~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~~~~e~l~- 343 (434)
.. +.++.+.+..++..+|+. ++....-++... .++. .++.+...++.| ++..+.+.|++++..+....+...
T Consensus 144 gg--~~~~~~~~~~ll~~lg~~-~~~~~~g~~~g~g~~~k--~~~~~~~~~~~E-a~~la~~~Gld~~~~~~~~~~~~~~ 217 (306)
T 3l6d_A 144 TG--DREAFEQHRALLEGLAGH-TVFLPWDEALAFATVLH--AHAFAAMVTFFE-AVGAGDRFGLPVSKTARLLLETSRF 217 (306)
T ss_dssp EE--CHHHHHHHHHHHHTTCSE-EEECCHHHHHHHHHHHH--HHHHHHHHHHHH-HHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred cC--CHHHHHHHHHHHHHhcCC-EEEecCCCCccHHHHHH--HHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHhhhh
Confidence 33 478999999999999763 222100010000 0111 122222333444 455689999999999886665542
Q ss_pred HHHHHHHHHh
Q 013877 344 GIISKIISTQ 353 (434)
Q Consensus 344 Gli~~li~e~ 353 (434)
| ...++...
T Consensus 218 ~-~s~~~~~~ 226 (306)
T 3l6d_A 218 F-VADALEEA 226 (306)
T ss_dssp H-HHHHHHHH
T ss_pred c-ccHHHHHH
Confidence 2 34444443
No 42
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.40 E-value=4e-12 Score=124.15 Aligned_cols=193 Identities=12% Similarity=0.087 Sum_probs=122.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch-H
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~-a 190 (434)
+||+|||+|.||.++|++|.+. |++|++++++.++ .+.+.+.|+.. ..+++|+++ +|+||+++|+. .
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~----~~~~~~~~~-aDvvi~~vp~~~~ 83 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW------PGGVTVYDIRIEA-MTPLAEAGATL----ADSVADVAA-ADLIHITVLDDAQ 83 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS------TTCEEEECSSTTT-SHHHHHTTCEE----CSSHHHHTT-SSEEEECCSSHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHHCCCEE----cCCHHHHHh-CCEEEEECCChHH
Confidence 6899999999999999999999 9999887766444 45566678775 578999999 99999999965 5
Q ss_pred HHHHHHHHHhcCCCCcEEEEeccchhhh---hhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeecC
Q 013877 191 QADNYEKIFSCMKPNSILGLSHGFLLGH---LQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (434)
Q Consensus 191 ~~~vl~eI~~~Lk~g~iL~~s~G~~i~~---~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~q 267 (434)
..++++++.+.+++|++|++.+...... +.+ .....++.++. +|-..+.. .-.. |...++ +..
T Consensus 84 ~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~---~a~~-------g~l~~~-~gg 149 (296)
T 3qha_A 84 VREVVGELAGHAKPGTVIAIHSTISDTTAVELAR--DLKARDIHIVD-APVSGGAA---AAAR-------GELATM-VGA 149 (296)
T ss_dssp HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHH--HHGGGTCEEEE-CCEESCHH---HHHH-------TCEEEE-EEC
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHH--HHHHcCCEEEe-CCCcCCHH---HHhc-------CCccEE-ecC
Confidence 5678999999999999998887654321 111 01123566664 46333322 1122 333323 333
Q ss_pred CCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHHHHHHHHHHHHHcCCCHHHH
Q 013877 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLA 334 (434)
Q Consensus 268 dvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~aliea~~~~~v~~Gl~~e~A 334 (434)
+.+..+.+..++..+|.. ++...-...-..-.+..... .+...+++.-++..+.+.|+++++.
T Consensus 150 --~~~~~~~~~~ll~~~g~~-~~~~g~~g~a~~~Kl~~N~~-~~~~~~~~~E~~~l~~~~G~d~~~~ 212 (296)
T 3qha_A 150 --DREVYERIKPAFKHWAAV-VIHAGEPGAGTRMKLARNML-TFTSYAAACEAMKLAEAAGLDLQAL 212 (296)
T ss_dssp --CHHHHHHHHHHHHHHEEE-EEEEESTTHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred --CHHHHHHHHHHHHHHcCC-eEEcCChhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 468899999999999963 21110000000000111111 1111123334556788999999877
No 43
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.39 E-value=1.4e-12 Score=119.81 Aligned_cols=180 Identities=12% Similarity=0.070 Sum_probs=120.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccc--cCCCcCCHHhhhccCCEEEEeecc
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE--ENGTLGDIYETISGSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~--~~~~~~~~~Ea~~~ADiViLavpd 188 (434)
+||+||| +|.||.++++.|.+. |++|++.+|+.++..+.....|... .+-...+..++++++|+||+++|+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~ 74 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL------GHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPW 74 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT------TCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCCh
Confidence 4899999 999999999999998 9998887776443322222223000 000024677889999999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEE-Eeccch--------------hhhhhcccccCCCCccEEEeccCCChhhHHHHHhhccc
Q 013877 189 AAQADNYEKIFSCMKPNSILG-LSHGFL--------------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKE 253 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~-~s~G~~--------------i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~ 253 (434)
....++++++.+.++ +++|+ .+.|+. ...+.+ .+| +..++.+||+.|+.......
T Consensus 75 ~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~---~~~-~~~~v~~~~~~~~~~~~~~~----- 144 (212)
T 1jay_A 75 EHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAE---VLE-SEKVVSALHTIPAARFANLD----- 144 (212)
T ss_dssp HHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHH---HHT-CSCEEECCTTCCHHHHHCTT-----
T ss_pred hhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHH---hCC-CCeEEEEccchHHHHhhCcC-----
Confidence 998899988888774 77665 556675 344433 334 46899999999988742111
Q ss_pred ccCCC-ceEEEeecCCCCHHHHHHHHHHHHHh-CCCcccccchhhhcccccccchhhhhchHHHHHHHHH
Q 013877 254 INGAG-INSSFAVHQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLF 321 (434)
Q Consensus 254 ~~G~G-v~aliav~qdvsg~a~e~a~~la~ai-G~~~~iettf~~E~~~Dlfge~tvL~G~~~aliea~~ 321 (434)
+.| +.. +.... +.++.+.+..++..+ |.. .+.. . -.+....+-++.|.++...+
T Consensus 145 --~~~~~~~-~~~g~--~~~~~~~v~~l~~~~~G~~-~~~~-------~-~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 145 --EKFDWDV-PVCGD--DDESKKVVMSLISEIDGLR-PLDA-------G-PLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp --CCCCEEE-EEEES--CHHHHHHHHHHHHHSTTEE-EEEE-------E-SGGGHHHHHTHHHHHHHHHH
T ss_pred --CCCCccE-EEECC--cHHHHHHHHHHHHHcCCCC-ceec-------c-chhHHHHhcchHHHHHHHHH
Confidence 123 343 33333 578999999999999 863 1111 1 13455667788888776665
No 44
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.38 E-value=2.9e-12 Score=134.88 Aligned_cols=148 Identities=16% Similarity=0.055 Sum_probs=104.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-----cCccccCCCcCCHHhhhcc---CCEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----AGFTEENGTLGDIYETISG---SDLVL 183 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-----~G~~~~~~~~~~~~Ea~~~---ADiVi 183 (434)
++|||||+|+||.++|++|.++ |++|.+++|..++ .+...+ .|+.. ..+++|+++. +|+||
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~------G~~V~v~dr~~~~-~~~l~~~~~~~~gi~~----~~s~~e~v~~l~~aDvVi 79 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH------GFTVCAYNRTQSK-VDHFLANEAKGKSIIG----ATSIEDFISKLKRPRKVM 79 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSHH-HHHHHHTTTTTSSEEC----CSSHHHHHHTSCSSCEEE
T ss_pred CCEEEEeeHHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHHcccccCCCeEE----eCCHHHHHhcCCCCCEEE
Confidence 6899999999999999999999 9999888777554 344444 46664 5688898887 99999
Q ss_pred Eeecch-HHHHHHHHHHhcCCCCcEEEEeccchh---hhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCc
Q 013877 184 LLISDA-AQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGI 259 (434)
Q Consensus 184 Lavpd~-a~~~vl~eI~~~Lk~g~iL~~s~G~~i---~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv 259 (434)
++||+. ...++++++.+.+++|++|++...... ..+.+ . ....++.++ .+|-..++. .... |.
T Consensus 80 l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~-~-l~~~g~~~v-~~pVsgg~~---~a~~-------G~ 146 (497)
T 2p4q_A 80 LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYE-E-LKKKGILFV-GSGVSGGEE---GARY-------GP 146 (497)
T ss_dssp ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH-H-HHHTTCEEE-EEEEESHHH---HHHH-------CC
T ss_pred EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHH-H-HHHcCCcee-CCCcccChh---Hhhc-------CC
Confidence 999994 677899999999999998886654321 12221 0 112356666 457333332 1222 34
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 260 NSSFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 260 ~aliav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
.++ +.. +.++.+.+..++..+|..
T Consensus 147 -~im-~gg--~~e~~~~v~~ll~~~g~~ 170 (497)
T 2p4q_A 147 -SLM-PGG--SEEAWPHIKNIFQSISAK 170 (497)
T ss_dssp -EEE-EEE--CGGGHHHHHHHHHHHSCE
T ss_pred -eEE-ecC--CHHHHHHHHHHHHHhcCc
Confidence 323 343 567889999999999963
No 45
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.38 E-value=6.5e-12 Score=121.28 Aligned_cols=197 Identities=16% Similarity=0.196 Sum_probs=123.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch-H
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~-a 190 (434)
+||+|||+|.||.+++.+|.+. |++|.++++. .+..+...+.|+.. ..+.+++++++|+||+++|+. .
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~v~~~~~ 74 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA------GYSLVVSDRN-PEAIADVIAAGAET----ASTAKAIAEQCDVIITMLPNSPH 74 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred ceEEEECchHHHHHHHHHHHhC------CCEEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhCCCEEEEECCCHHH
Confidence 5899999999999999999998 9998766654 33445555667764 567889999999999999954 4
Q ss_pred HHHHH---HHHHhcCCCCcEEEEec-cch--hhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEe
Q 013877 191 QADNY---EKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (434)
Q Consensus 191 ~~~vl---~eI~~~Lk~g~iL~~s~-G~~--i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~alia 264 (434)
...++ +++.+.+++|++|++.+ |.. ...+.+ .....++.++.. |-.+++.. ...+ ++..++
T Consensus 75 ~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~--~~~~~g~~~~~~-pv~~~~~~---~~~~------~~~~~~- 141 (299)
T 1vpd_A 75 VKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISD--ALKAKGVEMLDA-PVSGGEPK---AIDG------TLSVMV- 141 (299)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHH--HHHTTTCEEEEC-CEESHHHH---HHHT------CEEEEE-
T ss_pred HHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEEe-cCCCCHhH---HhcC------CEEEEe-
Confidence 56777 67889999999887554 432 223322 111235666643 54433321 1222 344432
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhh-hchHHH-HHHHHHH---HHHHcCCCHHHHHHHHH
Q 013877 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGIL-LGAVHG-IVESLFR---RFTENGMNEDLAYKNTV 339 (434)
Q Consensus 265 v~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL-~G~~~a-liea~~~---~~v~~Gl~~e~A~~~~~ 339 (434)
.. +.+..+.+..++..+|.. ++.. .+.... ...-+ .+...+ ++.++.| .+++.|+++++++....
T Consensus 142 -~~--~~~~~~~~~~ll~~~g~~-~~~~---~~~~~~---~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 211 (299)
T 1vpd_A 142 -GG--DKAIFDKYYDLMKAMAGS-VVHT---GDIGAG---NVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIR 211 (299)
T ss_dssp -ES--CHHHHHHHHHHHHTTEEE-EEEE---ESTTHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred -CC--CHHHHHHHHHHHHHHcCC-eEEe---CCcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 22 578889999999999963 1111 111111 11101 122221 3344444 48999999998888665
Q ss_pred HHH
Q 013877 340 ECI 342 (434)
Q Consensus 340 e~l 342 (434)
++.
T Consensus 212 ~~~ 214 (299)
T 1vpd_A 212 GGL 214 (299)
T ss_dssp TST
T ss_pred ccC
Confidence 543
No 46
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.37 E-value=2.6e-12 Score=127.13 Aligned_cols=185 Identities=14% Similarity=0.056 Sum_probs=117.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCc-----------cccCCCcCCHHhhhccCC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF-----------TEENGTLGDIYETISGSD 180 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~-----------~~~~~~~~~~~Ea~~~AD 180 (434)
+||+|||+|+||.++|.+|.++ |++|.+++|..++ .+...+.|. .. ..++++ ++.+|
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~------G~~V~~~~r~~~~-~~~l~~~g~~~~~~~~~~~~~~----~~~~~~-~~~aD 82 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN------GEEVILWARRKEI-VDLINVSHTSPYVEESKITVRA----TNDLEE-IKKED 82 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHH-HHHHHHHSCBTTBTTCCCCSEE----ESCGGG-CCTTE
T ss_pred CcEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCHHH-HHHHHHhCCcccCCCCeeeEEE----eCCHHH-hcCCC
Confidence 7999999999999999999999 9999888776443 333344452 22 456777 88999
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEE-Eeccchhhhhh---cc-cccCCCCccEEEeccCCChhhHHHHHhhccccc
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLLGHLQ---SM-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEIN 255 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~-~s~G~~i~~~~---~~-~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~ 255 (434)
+||++||+.+..++++++.+ ++++|+ ++.|+.....+ +. .-.++ ....++.+|+.+...
T Consensus 83 vVil~vk~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~~P~~~~~~------------ 146 (335)
T 1z82_A 83 ILVIAIPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLSGPSHAEEV------------ 146 (335)
T ss_dssp EEEECSCGGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEESSCCHHHH------------
T ss_pred EEEEECCHHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEECCccHHHH------------
Confidence 99999999888899887766 677665 44587542111 00 00123 224778999987665
Q ss_pred CCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccc-------------hhh----------hhch
Q 013877 256 GAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGE-------------RGI----------LLGA 312 (434)
Q Consensus 256 G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge-------------~tv----------L~G~ 312 (434)
+.|.+..+.+..+ + .+.+..++...|.. + ....|+++. .++ +...
T Consensus 147 ~~g~~~~~~~g~~-~---~~~~~~ll~~~g~~-~-------~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~ 214 (335)
T 1z82_A 147 AKKLPTAVTLAGE-N---SKELQKRISTEYFR-V-------YTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAAL 214 (335)
T ss_dssp HTTCCEEEEEEET-T---HHHHHHHHCCSSEE-E-------EEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred hCCCceEEEEEeh-h---HHHHHHHhCCCCEE-E-------EecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHH
Confidence 2455433333322 1 56677888777743 1 111122110 011 1122
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHH
Q 013877 313 VHGIVESLFRRFTENGMNEDLAYK 336 (434)
Q Consensus 313 ~~aliea~~~~~v~~Gl~~e~A~~ 336 (434)
...++..+.+.+.+.|++++..+.
T Consensus 215 ~~~~~~E~~~la~a~G~~~~~~~~ 238 (335)
T 1z82_A 215 ETRGIYEIARFGMFFGADQKTFMG 238 (335)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCChhhhcc
Confidence 223666678889999999987654
No 47
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.37 E-value=3.9e-12 Score=126.99 Aligned_cols=153 Identities=16% Similarity=0.117 Sum_probs=102.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc--------C--CCcCCHHhhhccCCE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE--------N--GTLGDIYETISGSDL 181 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~--------~--~~~~~~~Ea~~~ADi 181 (434)
+||+|||+|+||.++|.+|.++ |++|.+++|... ..+...+.|.... . ....++.++++++|+
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDv 88 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKK------CREVCVWHMNEE-EVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEI 88 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTT------EEEEEEECSCHH-HHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCE
Confidence 3999999999999999999998 999887776533 3344444331000 0 013577888999999
Q ss_pred EEEeecchHHHHHHHH----HHhcCCC-CcEEEEec-cchhhhh---hcc-cccCCCCccEEEeccCCChhhHHHHHhhc
Q 013877 182 VLLLISDAAQADNYEK----IFSCMKP-NSILGLSH-GFLLGHL---QSM-GLDFPKNIGVIAVCPKGMGPSVRRLYVQG 251 (434)
Q Consensus 182 ViLavpd~a~~~vl~e----I~~~Lk~-g~iL~~s~-G~~i~~~---~~~-~i~~~~di~VI~v~Pn~pg~~vr~ly~~G 251 (434)
||+++|+....+++.+ |.+++++ +++|+... |+..... .+. ...++.....++.+|+.+...
T Consensus 89 Vilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~-------- 160 (366)
T 1evy_A 89 ILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEV-------- 160 (366)
T ss_dssp EEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHH--------
T ss_pred EEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHH--------
Confidence 9999999888899998 9999988 88766544 8754211 000 002232223678889886543
Q ss_pred ccccCCCceEEEeecCCCCHHHHHHHHHHHHHh
Q 013877 252 KEINGAGINSSFAVHQDVDGRATNVALGWSVAL 284 (434)
Q Consensus 252 ~~~~G~Gv~aliav~qdvsg~a~e~a~~la~ai 284 (434)
+.|.+.++.+. ..+.+..+.+..++...
T Consensus 161 ----~~g~~~~~~~~-~~~~~~~~~v~~ll~~~ 188 (366)
T 1evy_A 161 ----ATGVFTCVSIA-SADINVARRLQRIMSTG 188 (366)
T ss_dssp ----HTTCCEEEEEE-CSSHHHHHHHHHHHSCT
T ss_pred ----HhCCceEEEEe-cCCHHHHHHHHHHhcCC
Confidence 13555433333 33567888888999988
No 48
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.37 E-value=1.4e-11 Score=124.33 Aligned_cols=152 Identities=14% Similarity=0.178 Sum_probs=105.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc---C-------CCcCCHHhhhccCCE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE---N-------GTLGDIYETISGSDL 181 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~---~-------~~~~~~~Ea~~~ADi 181 (434)
+||+|||+|+||.++|..|.++ |++|.++.|.. ...+...+.|.... + ....+++++++++|+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~------G~~V~l~~r~~-~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK------GQKVRLWSYES-DHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT------TCCEEEECSCH-HHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCE
T ss_pred CeEEEECccHHHHHHHHHHHHC------CCeEEEEeCCH-HHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCE
Confidence 7899999999999999999999 99988777753 33444444442110 0 013578899999999
Q ss_pred EEEeecchHHHHHHHHHHhcCCCCcEEE-Eeccchhh------hhhcccccCCCCccEEEeccCCChhhHHHHHhhcccc
Q 013877 182 VLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLLG------HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEI 254 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~g~iL~-~s~G~~i~------~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~ 254 (434)
||+++|++...+++++|.++++++++|+ .+.|+... .+.+ .+|...-.+...|+......
T Consensus 103 VilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~---~l~~~~~~vlsgP~~a~ev~---------- 169 (356)
T 3k96_A 103 ILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVAT---ELGQVPMAVISGPSLATEVA---------- 169 (356)
T ss_dssp EEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHH---HHCSCCEEEEESSCCHHHHH----------
T ss_pred EEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHH---HcCCCCEEEEECccHHHHHH----------
Confidence 9999999999999999999999998664 56777643 2322 22322235678887765441
Q ss_pred cCCCceEEEeecCCCCHHHHHHHHHHHHHhCC
Q 013877 255 NGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (434)
Q Consensus 255 ~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~ 286 (434)
.|.+..+.+.. .+.+..+.+..++...|.
T Consensus 170 --~g~pt~~via~-~~~~~~~~v~~lf~~~~~ 198 (356)
T 3k96_A 170 --ANLPTAVSLAS-NNSQFSKDLIERLHGQRF 198 (356)
T ss_dssp --TTCCEEEEEEE-SCHHHHHHHHHHHCCSSE
T ss_pred --cCCCeEEEEec-CCHHHHHHHHHHhCCCCe
Confidence 45655444443 245667777777776664
No 49
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.37 E-value=4.4e-12 Score=121.51 Aligned_cols=193 Identities=11% Similarity=0.051 Sum_probs=121.6
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
|+||+|||+|.||.++|.+|.+ |++|.++++...+ .+...+.|+.. .. ..++++++|+||+++|+..
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-------g~~V~~~~~~~~~-~~~~~~~g~~~----~~-~~~~~~~~D~vi~~v~~~~ 67 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-------RFPTLVWNRTFEK-ALRHQEEFGSE----AV-PLERVAEARVIFTCLPTTR 67 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-------TSCEEEECSSTHH-HHHHHHHHCCE----EC-CGGGGGGCSEEEECCSSHH
T ss_pred CCeEEEEcccHHHHHHHHHHhC-------CCeEEEEeCCHHH-HHHHHHCCCcc----cC-HHHHHhCCCEEEEeCCChH
Confidence 4789999999999999999863 5678777665443 34444446653 33 6788899999999999776
Q ss_pred -HHHHHHHHHhcCCCCcEEEEeccch---hhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeec
Q 013877 191 -QADNYEKIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (434)
Q Consensus 191 -~~~vl~eI~~~Lk~g~iL~~s~G~~---i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~ 266 (434)
..++++++.+.+++|++|++.+... ...+.+ .....++.++.. |..+++. .... |...++. .
T Consensus 68 ~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~--~~~~~g~~~~~~-p~~~~~~---~~~~-------g~~~~~~-~ 133 (289)
T 2cvz_A 68 EVYEVAEALYPYLREGTYWVDATSGEPEASRRLAE--RLREKGVTYLDA-PVSGGTS---GAEA-------GTLTVML-G 133 (289)
T ss_dssp HHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHH--HHHTTTEEEEEC-CEESHHH---HHHH-------TCEEEEE-E
T ss_pred HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEEe-cCCCChh---HHhh-------CCeEEEE-C
Confidence 5678888999999999887665432 222222 111236677765 8665553 2223 3444343 3
Q ss_pred CCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHH----HHHHHHHH---HHHcCCCHHHHHHHHH
Q 013877 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRR---FTENGMNEDLAYKNTV 339 (434)
Q Consensus 267 qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~a----liea~~~~---~v~~Gl~~e~A~~~~~ 339 (434)
. +.+..+.+..++ .+|.. ++.. .+. +....+..+.++ ++.++.|. +.+.|+++++++....
T Consensus 134 ~--~~~~~~~~~~ll-~~g~~-~~~~---~~~-----~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 201 (289)
T 2cvz_A 134 G--PEEAVERVRPFL-AYAKK-VVHV---GPV-----GAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVIN 201 (289)
T ss_dssp S--CHHHHHHHGGGC-TTEEE-EEEE---EST-----THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred C--CHHHHHHHHHHH-hhcCC-eEEc---CCC-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHH
Confidence 2 577888889999 98853 1111 111 111112122222 34444444 8899999998877665
Q ss_pred HHH
Q 013877 340 ECI 342 (434)
Q Consensus 340 e~l 342 (434)
++.
T Consensus 202 ~~~ 204 (289)
T 2cvz_A 202 ASS 204 (289)
T ss_dssp TST
T ss_pred ccC
Confidence 544
No 50
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.36 E-value=5.6e-12 Score=123.26 Aligned_cols=156 Identities=12% Similarity=0.070 Sum_probs=103.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CchhHHHHHHcCccccC-------CCcC--CHHhhhccCCE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEEN-------GTLG--DIYETISGSDL 181 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~-~~~s~~~A~~~G~~~~~-------~~~~--~~~Ea~~~ADi 181 (434)
+||+|||+|+||.++|.+|.++ |++|++.+|. +.+..+...+.|..... .... ++.++++++|+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~ 74 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN------GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEV 74 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH------CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCE
Confidence 5899999999999999999999 9998877761 23334555555531100 0123 56788899999
Q ss_pred EEEeecchHHHHHHHHHHhcCCCCcEEEEec-cc------hhhhhhcccc-cCCC-CccEEEeccCCChhhHHHHHhhcc
Q 013877 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH-GF------LLGHLQSMGL-DFPK-NIGVIAVCPKGMGPSVRRLYVQGK 252 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~-G~------~i~~~~~~~i-~~~~-di~VI~v~Pn~pg~~vr~ly~~G~ 252 (434)
||+++|+....++++++.+ ++++++|++.. |+ ....+.+..- .++. ..-.++.+|+.+...
T Consensus 75 vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~--------- 144 (335)
T 1txg_A 75 VLLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREV--------- 144 (335)
T ss_dssp EEECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHH---------
T ss_pred EEEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHH---------
Confidence 9999999999999999999 99999876554 87 2222222000 1111 113567888775433
Q ss_pred cccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 253 EINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 253 ~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
+.|.+..+.+.. .+.+..+.+..++...|..
T Consensus 145 ---~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~ 175 (335)
T 1txg_A 145 ---AKRMPTTVVFSS-PSESSANKMKEIFETEYFG 175 (335)
T ss_dssp ---HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEE
T ss_pred ---HccCCcEEEEEe-CCHHHHHHHHHHhCCCcEE
Confidence 135543333333 3567888888999888853
No 51
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.34 E-value=1.1e-11 Score=122.81 Aligned_cols=187 Identities=15% Similarity=0.051 Sum_probs=115.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCc------hhHHHHHHcCccccCCCcC-CHHhhhccCCEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGS------RSFAEARAAGFTEENGTLG-DIYETISGSDLVL 183 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G-~~Vivg~r~~~------~s~~~A~~~G~~~~~~~~~-~~~Ea~~~ADiVi 183 (434)
+||+|||+|+||.++|++|.+. | ++|+++++... ...+.+.+.|. . . +++|++++||+||
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~------G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~-----~~s~~e~~~~aDvVi 92 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR------NAARLAAYDLRFNDPAASGALRARAAELGV-E-----PLDDVAGIACADVVL 92 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECGGGGCTTTHHHHHHHHHHTTC-E-----EESSGGGGGGCSEEE
T ss_pred CeEEEECccHHHHHHHHHHHHc------CCCeEEEEeCCCccccchHHHHHHHHHCCC-C-----CCCHHHHHhcCCEEE
Confidence 7999999999999999999999 9 99888777531 23444455565 2 4 6789999999999
Q ss_pred EeecchHHHHHHHHHHhcCCCCcEEEEeccchhh---hhhcccccCCCCccEEEeccC-CChhhHHHHHhhcccccCCCc
Q 013877 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPK-GMGPSVRRLYVQGKEINGAGI 259 (434)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~---~~~~~~i~~~~di~VI~v~Pn-~pg~~vr~ly~~G~~~~G~Gv 259 (434)
+++|+....++++++.+.+++|++|++.++.... .+.+ .....++.++- +|- +|... ..| ..
T Consensus 93 ~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~--~l~~~g~~~~d-~pv~g~~~a-----~~g------~l 158 (317)
T 4ezb_A 93 SLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAG--AIATGKGSFVE-GAVMARVPP-----YAE------KV 158 (317)
T ss_dssp ECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHH--HHHTSSCEEEE-EEECSCSTT-----TGG------GS
T ss_pred EecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEe-ccCCCCchh-----hcC------CE
Confidence 9999999999889999999999999888776432 2211 01123455543 231 11111 122 23
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHhCCCcccccch-hhhcccccccchhhhhchHHHHHHHHHHHHHHcCCCHH
Q 013877 260 NSSFAVHQDVDGRATNVALGWSVALGSPFTFATTL-EQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNED 332 (434)
Q Consensus 260 ~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf-~~E~~~Dlfge~tvL~G~~~aliea~~~~~v~~Gl~~e 332 (434)
+. ++-..+ + +.+..++..+|.. ++...- ...-..-.+..++.+ ....+++--++..+.+.|++++
T Consensus 159 ~i-~vgg~~----~-~~~~~ll~~~g~~-v~~~g~~~g~a~~~Kl~~N~~~-~~~~~~~~E~~~la~~~Gid~~ 224 (317)
T 4ezb_A 159 PI-LVAGRR----A-VEVAERLNALGMN-LEAVGETPGQASSLKMIRSVMI-KGVEALLIEALSSAERAGVTER 224 (317)
T ss_dssp EE-EEESTT----H-HHHHHHHHTTTCE-EEEEESSTTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTTCHHH
T ss_pred EE-EEeCCh----H-HHHHHHHHHhCCC-eEEeCCCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHH
Confidence 33 332322 2 7888999999863 222210 000000011122222 2222344445678889999994
No 52
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.34 E-value=2.7e-11 Score=119.83 Aligned_cols=152 Identities=9% Similarity=0.018 Sum_probs=103.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-------cEEEEEecCCch----hHHHHHHcCccc--------cCC--CcC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-------IVVKVGLRKGSR----SFAEARAAGFTE--------ENG--TLG 170 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G-------~~Vivg~r~~~~----s~~~A~~~G~~~--------~~~--~~~ 170 (434)
+||+|||+|+||.++|.+|.++ | ++|.+++|.... ..+...+.+... ..+ ...
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~------g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN------AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhc------CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 6899999999999999999998 8 888877776440 233333222100 000 135
Q ss_pred CHHhhhccCCEEEEeecchHHHHHHHHHHhcCCCCcEEE-Eeccchh---------hhhhcccccCCCCccEEEeccCCC
Q 013877 171 DIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL---------GHLQSMGLDFPKNIGVIAVCPKGM 240 (434)
Q Consensus 171 ~~~Ea~~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~-~s~G~~i---------~~~~~~~i~~~~di~VI~v~Pn~p 240 (434)
+++++++++|+||+++|+....+++++|.++++++++|+ .+.|+.+ ..+.+ .++.+ ..++.+|+.+
T Consensus 83 ~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~---~~~~~-~~v~~gp~~a 158 (354)
T 1x0v_A 83 DVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGE---RLGIP-MSVLMGANIA 158 (354)
T ss_dssp SHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHH---HHTCC-EEEEECSCCH
T ss_pred CHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHH---HcCCC-EEEEECCCcH
Confidence 678889999999999999988999999999999998765 5557752 11121 12222 4678899887
Q ss_pred hhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCC
Q 013877 241 GPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (434)
Q Consensus 241 g~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~ 286 (434)
... +.|.+..+.+. ..+.+..+.+..++...|.
T Consensus 159 ~~v------------~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~ 191 (354)
T 1x0v_A 159 SEV------------ADEKFCETTIG-CKDPAQGQLLKELMQTPNF 191 (354)
T ss_dssp HHH------------HTTCCEEEEEE-CSSHHHHHHHHHHHCBTTE
T ss_pred HHH------------HhcCCceEEEE-ECCHHHHHHHHHHhCCCCE
Confidence 644 14555434433 3356778888888888875
No 53
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.34 E-value=2.9e-11 Score=121.54 Aligned_cols=148 Identities=10% Similarity=-0.008 Sum_probs=103.3
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCC-------cEEEEEecCCc-----hhHHHHHHcC--------------ccc
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD-------IVVKVGLRKGS-----RSFAEARAAG--------------FTE 164 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G-------~~Vivg~r~~~-----~s~~~A~~~G--------------~~~ 164 (434)
|+||+|||+|+||.++|.+|.++ | ++|.+++|... + .+...+.+ +..
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~------G~~~~~~~~~V~~~~r~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~i~~ 93 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN------AKNNYLFENEVRMWIRDEFVNGERM-VDIINNKHENTKYLKGVPLPHNIVA 93 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH------HHHCTTBCSCEEEECCSCC---CCH-HHHHHHHCBCTTTSTTCBCCTTEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHc------CCccCCCCCeEEEEECChhhhhHHH-HHHHHhcCcccccCCcccCcCCeEE
Confidence 36899999999999999999998 8 88888777644 3 33333322 221
Q ss_pred cCCCcCCHHhhhccCCEEEEeecchHHHHHHHHHHh----cCCCCcEEEEe-ccchhh---------hhhcccccCCCCc
Q 013877 165 ENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFS----CMKPNSILGLS-HGFLLG---------HLQSMGLDFPKNI 230 (434)
Q Consensus 165 ~~~~~~~~~Ea~~~ADiViLavpd~a~~~vl~eI~~----~Lk~g~iL~~s-~G~~i~---------~~~~~~i~~~~di 230 (434)
..+++++++++|+||++||+....+++++|.+ .++++++|+.. .|+... .+.+ .++.+
T Consensus 94 ----~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~---~~~~~- 165 (375)
T 1yj8_A 94 ----HSDLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISD---FLNIP- 165 (375)
T ss_dssp ----ESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHH---HSSSC-
T ss_pred ----ECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHH---HcCCC-
Confidence 34677889999999999999988999999999 99999877644 476531 1121 12322
Q ss_pred cEEEeccCCChhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCC
Q 013877 231 GVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (434)
Q Consensus 231 ~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~ 286 (434)
-.++.+|+.+... +.|.+..+.+.. .+.+..+.+..++...|.
T Consensus 166 ~~v~~gp~~a~~v------------~~g~~~~~~~~~-~~~~~~~~v~~ll~~~g~ 208 (375)
T 1yj8_A 166 CSALSGANIAMDV------------AMENFSEATIGG-NDKDSLVIWQRVFDLPYF 208 (375)
T ss_dssp EEEEECSCCHHHH------------HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTE
T ss_pred EEEEeCCchHHHH------------HhCCCeEEEEec-CCHHHHHHHHHHhCCCCe
Confidence 3577889886544 135555343332 356778888888888775
No 54
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.34 E-value=1.6e-11 Score=121.38 Aligned_cols=194 Identities=16% Similarity=0.093 Sum_probs=124.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch-H
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~-a 190 (434)
+||+|||+|.||.++|++|.+. |++|++++|. ....+...+.|+.. ..+.+|+++++|+||+++|+. .
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~-~~~~~~l~~~g~~~----~~~~~e~~~~aDvVi~~vp~~~~ 100 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA------GYALQVWNRT-PARAASLAALGATI----HEQARAAARDADIVVSMLENGAV 100 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTTCEE----ESSHHHHHTTCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHhC------CCeEEEEcCC-HHHHHHHHHCCCEe----eCCHHHHHhcCCEEEEECCCHHH
Confidence 8999999999999999999999 9998877665 34455556667764 578999999999999999965 5
Q ss_pred HHHHHH--HHHhcCCCCcEEEEeccchhhhhhcc-cccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEeecC
Q 013877 191 QADNYE--KIFSCMKPNSILGLSHGFLLGHLQSM-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (434)
Q Consensus 191 ~~~vl~--eI~~~Lk~g~iL~~s~G~~i~~~~~~-~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~aliav~q 267 (434)
..+++. ++.+.+++|++|++.+.......+.. ......++.++. +|-..+.. .-.. |-..++ +..
T Consensus 101 ~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~---~a~~-------g~l~i~-~gg 168 (320)
T 4dll_A 101 VQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLD-TPVSGGTV---GAEQ-------GTLVIM-AGG 168 (320)
T ss_dssp HHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECHHH---HHHH-------TCEEEE-EES
T ss_pred HHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEe-CCCcCCHh---HHhc-------CCeeEE-eCC
Confidence 567777 78889999999988876543211100 001123566665 46443332 1122 233323 333
Q ss_pred CCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchh-hhhchHH----HHHHHHHHHHHHcCCCHHHHHHHH
Q 013877 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG-ILLGAVH----GIVESLFRRFTENGMNEDLAYKNT 338 (434)
Q Consensus 268 dvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~t-vL~G~~~----aliea~~~~~v~~Gl~~e~A~~~~ 338 (434)
+.++.+.+..++..+ .. ++... +.. -++.. .+.+... +++.-++..+.+.|+++++.+...
T Consensus 169 --~~~~~~~~~~ll~~~-~~-~~~~g---~~g---~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~ 234 (320)
T 4dll_A 169 --KPADFERSLPLLKVF-GR-ATHVG---PHG---SGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAI 234 (320)
T ss_dssp --CHHHHHHHHHHHHHH-EE-EEEEE---STT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred --CHHHHHHHHHHHHhc-CC-EEEeC---Ccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 468899999999999 42 22111 110 01111 1122222 233445566789999999887643
No 55
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.33 E-value=2.1e-11 Score=117.77 Aligned_cols=197 Identities=15% Similarity=0.117 Sum_probs=122.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH-
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a- 190 (434)
+||+|||+|.||.+++.+|.+. |++|.++++. ....+...+.|+.. ..+.+++++++|+|++++|+..
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~vp~~~~ 73 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE------GVTVYAFDLM-EANVAAVVAQGAQA----CENNQKVAAASDIIFTSLPNAGI 73 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHTTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCeEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhCCCEEEEECCCHHH
Confidence 7899999999999999999998 9998776654 33344455557764 5678899999999999998655
Q ss_pred HHHHHH---HHHhcCCCCcEEEE-eccc--hhhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEEe
Q 013877 191 QADNYE---KIFSCMKPNSILGL-SHGF--LLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (434)
Q Consensus 191 ~~~vl~---eI~~~Lk~g~iL~~-s~G~--~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~alia 264 (434)
...++. ++.+.+++|++|+. +.|. ....+.+ .....++.++. +|..++.. .+.. |...+++
T Consensus 74 ~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~--~~~~~g~~~~~-~p~~~~~~---~a~~-------g~~~~~~ 140 (301)
T 3cky_A 74 VETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAK--VAAEKGIDYVD-APVSGGTK---GAEA-------GTLTIMV 140 (301)
T ss_dssp HHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHH--HHHHTTCEEEE-CCEESHHH---HHHH-------TCEEEEE
T ss_pred HHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEE-ccCCCCHH---HHHc-------CCeEEEE
Confidence 567775 78889999998765 4454 2233322 01113556664 57555542 2333 3433343
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchh-hhhchHHH-HHHH---HHHHHHHcCCCHHHHHHHHH
Q 013877 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG-ILLGAVHG-IVES---LFRRFTENGMNEDLAYKNTV 339 (434)
Q Consensus 265 v~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~t-vL~G~~~a-liea---~~~~~v~~Gl~~e~A~~~~~ 339 (434)
.. +.+..+.+..++..+|..... . .+... +... .+.+.... ++.+ ++..+.+.|+++++++....
T Consensus 141 -~g--~~~~~~~v~~ll~~~g~~~~~-~---~~~g~---~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 210 (301)
T 3cky_A 141 -GA--SEAVFEKIQPVLSVIGKDIYH-V---GDTGA---GDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIG 210 (301)
T ss_dssp -ES--CHHHHHHHHHHHHHHEEEEEE-E---ESTTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred -CC--CHHHHHHHHHHHHHhcCCEEE-e---CCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 33 578889999999999964111 1 01000 0000 01111111 2222 33448999999998877655
Q ss_pred HHH
Q 013877 340 ECI 342 (434)
Q Consensus 340 e~l 342 (434)
++.
T Consensus 211 ~~~ 213 (301)
T 3cky_A 211 KSS 213 (301)
T ss_dssp TST
T ss_pred cCC
Confidence 543
No 56
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.33 E-value=3.8e-11 Score=125.27 Aligned_cols=149 Identities=13% Similarity=0.093 Sum_probs=104.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc---CccccCCCcCCHHhhhcc---CCEEEEe
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISG---SDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~---G~~~~~~~~~~~~Ea~~~---ADiViLa 185 (434)
++|+|||+|+||.++|++|.+. |++|.+++|..++..+...+. |+.. ..+++|+++. +|+||++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~------G~~V~v~dr~~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvVila 75 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR------GYTVAIYNRTTSKTEEVFKEHQDKNLVF----TKTLEEFVGSLEKPRRIMLM 75 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHTTTSCEEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred CcEEEEeeHHHHHHHHHHHHhC------CCEEEEEcCCHHHHHHHHHhCcCCCeEE----eCCHHHHHhhccCCCEEEEE
Confidence 6899999999999999999999 999888777644433333332 6654 5688898876 9999999
Q ss_pred ecch-HHHHHHHHHHhcCCCCcEEEEec-cch--hhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceE
Q 013877 186 ISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (434)
Q Consensus 186 vpd~-a~~~vl~eI~~~Lk~g~iL~~s~-G~~--i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~a 261 (434)
||+. ...++++++.+.+++|++|++.. |.. ...+.+ .....++.++ .+|...+... ... |...
T Consensus 76 vp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~--~l~~~g~~~v-~~pv~gg~~~---a~~-------g~~i 142 (474)
T 2iz1_A 76 VQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNA--ELADSGINFI-GTGVSGGEKG---ALL-------GPSM 142 (474)
T ss_dssp CCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HTTTSSCEEE-EEEECSHHHH---HHH-------CCCE
T ss_pred ccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHH--HHHHCCCeEE-CCCCCCChhh---hcc-------CCeE
Confidence 9995 56789999999999999887654 442 222322 1222456666 4686555431 222 3432
Q ss_pred EEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 262 SFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 262 liav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
+ +.. +.++.+.+..++..+|..
T Consensus 143 -~-~gg--~~~~~~~v~~ll~~~g~~ 164 (474)
T 2iz1_A 143 -M-PGG--QKEAYDLVAPIFEQIAAK 164 (474)
T ss_dssp -E-EEE--CHHHHHHHHHHHHHHSCB
T ss_pred -E-ecC--CHHHHHHHHHHHHHHhcc
Confidence 3 333 578899999999999964
No 57
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.33 E-value=2e-11 Score=117.51 Aligned_cols=197 Identities=12% Similarity=0.062 Sum_probs=122.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
|+||+|||+|.||.++|.+|.+. |++|++++ ..+ ..+...+.|+.. ..+.+++++++|+||+++|+..
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~-~~~-~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~vp~~~ 70 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA------GHQLHVTT-IGP-VADELLSLGAVN----VETARQVTEFADIIFIMVPDTP 70 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT------TCEEEECC-SSC-CCHHHHTTTCBC----CSSHHHHHHTCSEEEECCSSHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCEEEEEc-CHH-HHHHHHHcCCcc----cCCHHHHHhcCCEEEEECCCHH
Confidence 47999999999999999999998 99987665 433 344455557654 5678899999999999998877
Q ss_pred H-HHHHH---HHHhcCCCCcEEEEeccch---hhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEE
Q 013877 191 Q-ADNYE---KIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (434)
Q Consensus 191 ~-~~vl~---eI~~~Lk~g~iL~~s~G~~---i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~ali 263 (434)
+ ..++. ++.+.+++|++|++.+... ...+.+ .....++.++ -+|...++. .... |...++
T Consensus 71 ~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~--~~~~~g~~~~-~~p~~~~~~---~a~~-------g~~~~~ 137 (295)
T 1yb4_A 71 QVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQ--RVNEMGADYL-DAPVSGGEI---GARE-------GTLSIM 137 (295)
T ss_dssp HHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHH--HHHTTTEEEE-ECCEESHHH---HHHH-------TCEEEE
T ss_pred HHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEE-EccCCCCHH---HHHc-------CCeEEE
Confidence 5 57887 7888899999877554332 222322 0111244554 335433322 2223 343433
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchh-hhhchHHH-HHHHHH---HHHHHcCCCHHHHHHHH
Q 013877 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG-ILLGAVHG-IVESLF---RRFTENGMNEDLAYKNT 338 (434)
Q Consensus 264 av~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~t-vL~G~~~a-liea~~---~~~v~~Gl~~e~A~~~~ 338 (434)
+ .. +.+..+.+..++..+|.. ++.. .+.... ... .+.+...+ ++.++. ..+.+.|+++++++...
T Consensus 138 ~-~~--~~~~~~~~~~ll~~~g~~-~~~~---~~~~~~---~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~ 207 (295)
T 1yb4_A 138 V-GG--EQKVFDRVKPLFDILGKN-ITLV---GGNGDG---QTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQAL 207 (295)
T ss_dssp E-ES--CHHHHHHHHHHHHHHEEE-EEEE---ESTTHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred E-CC--CHHHHHHHHHHHHHhcCC-EEEe---CCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3 33 578889999999999963 1111 111111 111 11222222 333444 44899999999887765
Q ss_pred HHHH
Q 013877 339 VECI 342 (434)
Q Consensus 339 ~e~l 342 (434)
.++.
T Consensus 208 ~~~~ 211 (295)
T 1yb4_A 208 MGGF 211 (295)
T ss_dssp TSSS
T ss_pred HcCC
Confidence 5544
No 58
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.32 E-value=3.4e-11 Score=121.84 Aligned_cols=151 Identities=16% Similarity=0.116 Sum_probs=108.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccC---CEEE
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGS---DLVL 183 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~A---DiVi 183 (434)
-+++ +||+|||+|.||.++|++|.+. |++|++++|. ....+.+.+.|+.. ..+++|+++++ |+||
T Consensus 19 Mm~~-mkIgiIGlG~mG~~~A~~L~~~------G~~V~v~dr~-~~~~~~l~~~g~~~----~~s~~e~~~~a~~~DvVi 86 (358)
T 4e21_A 19 YFQS-MQIGMIGLGRMGADMVRRLRKG------GHECVVYDLN-VNAVQALEREGIAG----ARSIEEFCAKLVKPRVVW 86 (358)
T ss_dssp ---C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTTCBC----CSSHHHHHHHSCSSCEEE
T ss_pred hhcC-CEEEEECchHHHHHHHHHHHhC------CCEEEEEeCC-HHHHHHHHHCCCEE----eCCHHHHHhcCCCCCEEE
Confidence 3445 8999999999999999999999 9998877665 34456666677764 57899999999 9999
Q ss_pred EeecchHHHHHHHHHHhcCCCCcEEEEeccchhh---hhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCce
Q 013877 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGIN 260 (434)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~ 260 (434)
+++|+....++++++.+.+++|++|++.+..... .+.+ .....++.++- +|-.-+.. .-+. |.
T Consensus 87 ~~vp~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~--~l~~~g~~~vd-apVsGg~~---~a~~-------G~- 152 (358)
T 4e21_A 87 LMVPAAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRAD--QMRAQGITYVD-VGTSGGIF---GLER-------GY- 152 (358)
T ss_dssp ECSCGGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHH--HHHTTTCEEEE-EEEECGGG---HHHH-------CC-
T ss_pred EeCCHHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHH--HHHHCCCEEEe-CCCCCCHH---HHhc-------CC-
Confidence 9999997778999999999999999887765421 1111 12234667664 35322222 1122 33
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHhCC
Q 013877 261 SSFAVHQDVDGRATNVALGWSVALGS 286 (434)
Q Consensus 261 aliav~qdvsg~a~e~a~~la~aiG~ 286 (434)
. |.+.. +.++.+.++.++..+|.
T Consensus 153 ~-im~GG--~~~a~~~~~~ll~~lg~ 175 (358)
T 4e21_A 153 C-LMIGG--EKQAVERLDPVFRTLAP 175 (358)
T ss_dssp E-EEEES--CHHHHHHTHHHHHHHSC
T ss_pred e-eeecC--CHHHHHHHHHHHHHhcc
Confidence 3 33444 46899999999999994
No 59
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.32 E-value=1.6e-11 Score=116.63 Aligned_cols=90 Identities=18% Similarity=0.241 Sum_probs=70.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~-~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
+||+|||+|+||.++|++|.+. |++|++.++. ..+..+...+.|+. .+.+++++++|+||+++|+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~------g~~V~~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~aDvvi~~v~~~~ 68 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR------GVEVVTSLEGRSPSTIERARTVGVT------ETSEEDVYSCPVVISAVTPGV 68 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT------TCEEEECCTTCCHHHHHHHHHHTCE------ECCHHHHHTSSEEEECSCGGG
T ss_pred CeEEEEechHHHHHHHHHHHHC------CCeEEEeCCccCHHHHHHHHHCCCc------CCHHHHHhcCCEEEEECCCHH
Confidence 4899999999999999999998 9998775442 23334444455654 356788999999999999998
Q ss_pred HHHHHHHHHhcCCCCcEEEEeccch
Q 013877 191 QADNYEKIFSCMKPNSILGLSHGFL 215 (434)
Q Consensus 191 ~~~vl~eI~~~Lk~g~iL~~s~G~~ 215 (434)
+.+.+.++.+.+++ +|++..+..
T Consensus 69 ~~~~~~~~~~~~~~--~vi~~s~~~ 91 (264)
T 1i36_A 69 ALGAARRAGRHVRG--IYVDINNIS 91 (264)
T ss_dssp HHHHHHHHHTTCCS--EEEECSCCC
T ss_pred HHHHHHHHHHhcCc--EEEEccCCC
Confidence 87777788888877 777776664
No 60
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.30 E-value=2e-12 Score=136.88 Aligned_cols=169 Identities=18% Similarity=0.143 Sum_probs=120.4
Q ss_pred hhhccCCccccc-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcC
Q 013877 92 YIVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (434)
Q Consensus 92 ~~~~~~~~~f~~-~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~ 170 (434)
.-+|.|+|.... ....+.| ++|||||+|+||.++|++|+.. |++|+++++.. ..+.+.+.|+.. .
T Consensus 123 ~~~~~g~w~~~~~~~~~l~g-~~vgIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~--~~~~a~~~g~~~-----~ 188 (529)
T 1ygy_A 123 ASLREHTWKRSSFSGTEIFG-KTVGVVGLGRIGQLVAQRIAAF------GAYVVAYDPYV--SPARAAQLGIEL-----L 188 (529)
T ss_dssp HHHHTTCCCGGGCCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECTTS--CHHHHHHHTCEE-----C
T ss_pred HHHHhCCCcccCcCccccCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEECCCC--ChhHHHhcCcEE-----c
Confidence 346778896432 2357899 9999999999999999999988 99987666543 345567778763 4
Q ss_pred CHHhhhccCCEEEEeecch-HHHHHHHH-HHhcCCCCcEEEEec-cchhh------hhhcccccCCCCccEEEeccCCCh
Q 013877 171 DIYETISGSDLVLLLISDA-AQADNYEK-IFSCMKPNSILGLSH-GFLLG------HLQSMGLDFPKNIGVIAVCPKGMG 241 (434)
Q Consensus 171 ~~~Ea~~~ADiViLavpd~-a~~~vl~e-I~~~Lk~g~iL~~s~-G~~i~------~~~~~~i~~~~di~VI~v~Pn~pg 241 (434)
+.+|++++||+|++++|+. ....++.+ +.+.||+|++|++++ |-.+. .+.+..+ -...+||+..+|. +.
T Consensus 189 ~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i-~ga~lDv~~~eP~-~~ 266 (529)
T 1ygy_A 189 SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHV-RAAGLDVFATEPC-TD 266 (529)
T ss_dssp CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSE-EEEEESSCSSSSC-SC
T ss_pred CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCc-cEEEEeeccCCCC-CC
Confidence 8899999999999999988 55677765 888999999988664 42211 1111000 0114678888884 32
Q ss_pred hhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHH-----HHHHHHHhCCC
Q 013877 242 PSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV-----ALGWSVALGSP 287 (434)
Q Consensus 242 ~~vr~ly~~G~~~~G~Gv~aliav~qd-vsg~a~e~-----a~~la~aiG~~ 287 (434)
+ .+|. +-+.++++|.. .+.++.+. +..+...+++.
T Consensus 267 ~---~L~~--------~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~ 307 (529)
T 1ygy_A 267 S---PLFE--------LAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGE 307 (529)
T ss_dssp C---GGGG--------CTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTC
T ss_pred c---hHHh--------CCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 2 2343 46888999987 67777765 77888888875
No 61
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.27 E-value=1.9e-11 Score=127.72 Aligned_cols=148 Identities=17% Similarity=0.054 Sum_probs=103.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-----cCccccCCCcCCHHhhhc---cCCEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----AGFTEENGTLGDIYETIS---GSDLVL 183 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-----~G~~~~~~~~~~~~Ea~~---~ADiVi 183 (434)
++|+|||+|+||.++|++|.+. |++|.+++|..++ .+...+ .|+.. ..+++|+++ ++|+||
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~------G~~V~v~dr~~~~-~~~l~~~~~~g~gi~~----~~~~~e~v~~l~~aDvVi 71 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVSK-VDDFLANEAKGTKVLG----AHSLEEMVSKLKKPRRII 71 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTHH-HHHHHHTTTTTSSCEE----CSSHHHHHHHBCSSCEEE
T ss_pred CeEEEEChHHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHhccccCCCeEE----eCCHHHHHhhccCCCEEE
Confidence 5799999999999999999999 9998887776544 344444 45553 567888874 899999
Q ss_pred Eeecch-HHHHHHHHHHhcCCCCcEEEEe-ccchh--hhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCc
Q 013877 184 LLISDA-AQADNYEKIFSCMKPNSILGLS-HGFLL--GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGI 259 (434)
Q Consensus 184 Lavpd~-a~~~vl~eI~~~Lk~g~iL~~s-~G~~i--~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv 259 (434)
++||+. ...++++++.+++++|++|++. .|... ..+.+ .....++.++ .+|...+... -. .|.
T Consensus 72 laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~--~l~~~g~~~v-~~pv~g~~~~---a~-------~g~ 138 (482)
T 2pgd_A 72 LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCR--DLKDKGILFV-GSGVSGGEDG---AR-------YGP 138 (482)
T ss_dssp ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEE-EEEEESHHHH---HH-------HCC
T ss_pred EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEe-CCCCCCChhh---hc-------cCC
Confidence 999996 6678999999999999988765 34432 12221 0112356666 5676544331 12 244
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 260 NSSFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 260 ~aliav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
.++ +.. +.++.+.+..++..+|..
T Consensus 139 -~i~-~gg--~~e~~~~v~~ll~~~g~~ 162 (482)
T 2pgd_A 139 -SLM-PGG--NKEAWPHIKAIFQGIAAK 162 (482)
T ss_dssp -EEE-EEE--CTTTHHHHHHHHHHHSCB
T ss_pred -eEE-eCC--CHHHHHHHHHHHHHhhhh
Confidence 323 333 356888899999999974
No 62
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.26 E-value=9.9e-12 Score=123.43 Aligned_cols=161 Identities=15% Similarity=0.084 Sum_probs=109.8
Q ss_pred hhhccCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC
Q 013877 92 YIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (434)
Q Consensus 92 ~~~~~~~~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~ 171 (434)
.-+|+|+|.... ...+.| ++|||||+|+||.++|++|+.. |++|+++++...+ ..+.+.|+.. .+
T Consensus 125 ~~~~~g~w~~~~-~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~-----~~ 189 (313)
T 2ekl_A 125 ALAKSGIFKKIE-GLELAG-KTIGIVGFGRIGTKVGIIANAM------GMKVLAYDILDIR--EKAEKINAKA-----VS 189 (313)
T ss_dssp HHHHTTCCCCCC-CCCCTT-CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHTTCEE-----CC
T ss_pred HHHHcCCCCCCC-CCCCCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCcch--hHHHhcCcee-----cC
Confidence 346778896333 368999 9999999999999999999988 9998776665433 3466778763 47
Q ss_pred HHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEeccchh-------hhhhcccccCCCCccEEEeccCCChh
Q 013877 172 IYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFLL-------GHLQSMGLDFPKNIGVIAVCPKGMGP 242 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~G~~i-------~~~~~~~i~~~~di~VI~v~Pn~pg~ 242 (434)
.++++++||+|++++|.... ..++ ++..+.||+|++|+.++--.+ ..+.+..+ -...+||+..+|.. ..
T Consensus 190 l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i-~ga~lDv~~~eP~~-~~ 267 (313)
T 2ekl_A 190 LEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKV-YAYATDVFWNEPPK-EE 267 (313)
T ss_dssp HHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCE-EEEEESCCSSSSCC-SH
T ss_pred HHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCC-cEEEEecCCCCCCC-Cc
Confidence 89999999999999997664 3555 457788999998886643221 11211011 01235788888854 33
Q ss_pred hHHHHHhhcccccCCCceEEEeecCC-CCHHHHHHH
Q 013877 243 SVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVA 277 (434)
Q Consensus 243 ~vr~ly~~G~~~~G~Gv~aliav~qd-vsg~a~e~a 277 (434)
....+|.. -+.++++|.. .|.++.+..
T Consensus 268 ~~~~L~~~--------~nviltPH~~~~t~~~~~~~ 295 (313)
T 2ekl_A 268 WELELLKH--------ERVIVTTHIGAQTKEAQKRV 295 (313)
T ss_dssp HHHHHHHS--------TTEEECCSCTTCSHHHHHHH
T ss_pred ccchHhhC--------CCEEECCccCcCcHHHHHHH
Confidence 22345653 5788999974 444554433
No 63
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.26 E-value=4.3e-12 Score=122.95 Aligned_cols=165 Identities=16% Similarity=0.117 Sum_probs=101.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCchhHHHHHH-cCccccC--CC-------cCCHHhhhccCC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARA-AGFTEEN--GT-------LGDIYETISGSD 180 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G-~~Vivg~r~~~~s~~~A~~-~G~~~~~--~~-------~~~~~Ea~~~AD 180 (434)
+||+|||+|+||.++|.+|.++. ...-| ++|++.+| ++..+...+ .|+...+ +. ..+..+.++.+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~-~~~~g~~~V~~~~r--~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRA-AATDGLLEVSWIAR--GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVD 85 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHH-HHTTSSEEEEEECC--HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCc-cccCCCCCEEEEEc--HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCC
Confidence 58999999999999999998640 00004 68877766 344455555 6775411 00 013345678999
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEE-Eeccchh-hhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCC
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~-~s~G~~i-~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~G 258 (434)
+||+++|+....++++++.++++++++|+ +..|+.. ..+.+ .+|+. .+++.+|+.+.......... ..+.|
T Consensus 86 ~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~---~l~~~-~v~~g~~~~~a~~~~pg~~~---~~~~g 158 (317)
T 2qyt_A 86 YILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIAERMRT---YLPDT-VVWKGCVYISARKSAPGLIT---LEADR 158 (317)
T ss_dssp EEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTT---TSCTT-TBCEEEEEEEEEEEETTEEE---EEEEE
T ss_pred EEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHH---HCCCC-cEEEEEEEEEEEEcCCCEEE---EcCCC
Confidence 99999999999999999999998888665 5678765 34433 34443 56666665544331000000 01233
Q ss_pred ceEEEeec-CCCCHHHHHHHHHHHHHhCCC
Q 013877 259 INSSFAVH-QDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 259 v~aliav~-qdvsg~a~e~a~~la~aiG~~ 287 (434)
...+++.. ...+.+.. .+..++...|..
T Consensus 159 ~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~ 187 (317)
T 2qyt_A 159 ELFYFGSGLPEQTDDEV-RLAELLTAAGIR 187 (317)
T ss_dssp EEEEEECCSSSCCHHHH-HHHHHHHHTTCC
T ss_pred ceEEEcCCCCCCcCHHH-HHHHHHHHCCCC
Confidence 33324332 33345555 778899999864
No 64
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.26 E-value=6.2e-11 Score=123.96 Aligned_cols=149 Identities=16% Similarity=0.117 Sum_probs=103.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcC-------ccccCCCcCCHHhhhcc---CCE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-------FTEENGTLGDIYETISG---SDL 181 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G-------~~~~~~~~~~~~Ea~~~---ADi 181 (434)
+||+|||+|+||.++|++|.+. |++|.+++|..++..+...+.| +.. ..+++|+++. +|+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~------G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~----~~~~~e~v~~l~~aDv 71 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK------GFKVAVFNRTYSKSEEFMKANASAPFAGNLKA----FETMEAFAASLKKPRK 71 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE----CSCHHHHHHHBCSSCE
T ss_pred CEEEEEChHHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEE----ECCHHHHHhcccCCCE
Confidence 5799999999999999999999 9998887776444434444445 433 5678888874 999
Q ss_pred EEEeecch-HHHHHHHHHHhcCCCCcEEEEec-cch--hhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCC
Q 013877 182 VLLLISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGA 257 (434)
Q Consensus 182 ViLavpd~-a~~~vl~eI~~~Lk~g~iL~~s~-G~~--i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~ 257 (434)
||++||+. ...++++++.+.+++|++|++.. |.. ...+.+ . ....++.++. +|...+... ...
T Consensus 72 VilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~-~-l~~~g~~~v~-~pv~gg~~~---a~~------- 138 (478)
T 1pgj_A 72 ALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQ-Q-LEAAGLRFLG-MGISGGEEG---ARK------- 138 (478)
T ss_dssp EEECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHH-H-HHTTTCEEEE-EEEESHHHH---HHH-------
T ss_pred EEEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHH-H-HHHCCCeEEE-eeccCCHHH---Hhc-------
Confidence 99999995 66789999999999999877554 542 122222 1 1123566663 576554431 222
Q ss_pred CceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 258 GINSSFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 258 Gv~aliav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
|. .++ +.. +.++.+.+..++..+|..
T Consensus 139 g~-~i~-~gg--~~~~~~~v~~ll~~~g~~ 164 (478)
T 1pgj_A 139 GP-AFF-PGG--TLSVWEEIRPIVEAAAAK 164 (478)
T ss_dssp CC-EEE-EEE--CHHHHHHHHHHHHHHSCB
T ss_pred CC-eEe-ccC--CHHHHHHHHHHHHHhccc
Confidence 34 323 333 478899999999999974
No 65
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.26 E-value=1.8e-11 Score=116.77 Aligned_cols=149 Identities=16% Similarity=0.087 Sum_probs=96.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc---Cc--cccCCCcCCHHhhhccCCEEEEee
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GF--TEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~---G~--~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
+||+|||+|+||.++|.+|.++ |++|.+.+|...+..+ .... |. .. .-...+ .++++++|+||+++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~~~~~~-l~~~~~~~~~~~~-~~~~~~-~~~~~~~d~vi~~v 71 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ------GHEVQGWLRVPQPYCS-VNLVETDGSIFNE-SLTAND-PDFLATSDLLLVTL 71 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSEEE-EEEECTTSCEEEE-EEEESC-HHHHHTCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCccceee-EEEEcCCCceeee-eeeecC-ccccCCCCEEEEEe
Confidence 5899999999999999999999 9998887776432211 1111 11 00 001223 46788999999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEEE-Eeccchh-hhhhcccccCCC---C---ccEEEeccCCChhhHHHHHhhcccccCCC
Q 013877 187 SDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQSMGLDFPK---N---IGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL~-~s~G~~i-~~~~~~~i~~~~---d---i~VI~v~Pn~pg~~vr~ly~~G~~~~G~G 258 (434)
|+....++++++.++++++++|+ ...|+.. ..+.+ .+++ + ....+.+| .+... +.|
T Consensus 72 ~~~~~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~---~~~~~~~g~~~~~~~~~~p-~~~~~------------~~g 135 (291)
T 1ks9_A 72 KAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQN---IQQPLLMGTTTHAARRDGN-VIIHV------------ANG 135 (291)
T ss_dssp CGGGHHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTT---CCSCEEEEEECCEEEEETT-EEEEE------------ECC
T ss_pred cHHhHHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHH---hcCCeEEEEEeEccEEcCC-EEEEe------------ccc
Confidence 99999999999999999988665 5677754 23333 2333 1 01234444 32221 356
Q ss_pred ceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 259 INSSFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 259 v~aliav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
... +.+.. .+.+..+.+..++..+|..
T Consensus 136 ~~~-i~~~~-~~~~~~~~~~~ll~~~g~~ 162 (291)
T 1ks9_A 136 ITH-IGPAR-QQDGDYSYLADILQTVLPD 162 (291)
T ss_dssp CEE-EEESS-GGGTTCTHHHHHHHTTSSC
T ss_pred ceE-EccCC-CCcchHHHHHHHHHhcCCC
Confidence 544 44322 2345667788999999865
No 66
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.90 E-value=6e-13 Score=124.04 Aligned_cols=151 Identities=14% Similarity=0.082 Sum_probs=104.1
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeec
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavp 187 (434)
.++ +||+|||+|+||.++|++|.+. |++|++++|... .+.....|+.. .+..++++++|+||+++|
T Consensus 17 ~~~-~~I~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~~--~~~~~~~g~~~-----~~~~~~~~~aDvVilav~ 82 (201)
T 2yjz_A 17 EKQ-GVVCIFGTGDFGKSLGLKMLQC------GYSVVFGSRNPQ--VSSLLPRGAEV-----LCYSEAASRSDVIVLAVH 82 (201)
Confidence 455 8999999999999999999998 888877766533 22333345542 377888999999999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEE-Eeccch--------hhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCC
Q 013877 188 DAAQADNYEKIFSCMKPNSILG-LSHGFL--------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~-~s~G~~--------i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~G 258 (434)
+....+++ ++.+ ++++++|+ .+.|+. ..++++ .++. ..+|+++||+|.......-..| .
T Consensus 83 ~~~~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~---~~~~-~~vvra~~n~~a~~~~~g~l~g------~ 150 (201)
T 2yjz_A 83 REHYDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQ---LVPG-AHVVKAFNTISAWALQSGTLDA------S 150 (201)
Confidence 98777776 5554 45677654 667774 234433 3343 4899999999987742111111 1
Q ss_pred ceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 259 INSSFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 259 v~aliav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
...+++ .. +.++++.+..++..+|..
T Consensus 151 ~~~~~~-g~--~~~~~~~v~~ll~~~G~~ 176 (201)
T 2yjz_A 151 RQVFVC-GN--DSKAKDRVMDIARTLGLT 176 (201)
Confidence 123233 33 467888999999999964
No 67
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.25 E-value=2.8e-10 Score=124.58 Aligned_cols=209 Identities=11% Similarity=0.061 Sum_probs=132.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHH-----------HHcCcccc---------CCCcC
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-----------RAAGFTEE---------NGTLG 170 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A-----------~~~G~~~~---------~~~~~ 170 (434)
++||+|||+|+||.+||.+|.++ |++|++.+++.+ ..+.+ .+.|.... -....
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~~-~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~ 386 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK------GTPILMKDINEH-GIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTL 386 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT------TCCEEEECSSHH-HHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEES
T ss_pred CCEEEEECCChhhHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEEC
Confidence 58999999999999999999999 999887766533 23332 22342100 00023
Q ss_pred CHHhhhccCCEEEEeecchHH--HHHHHHHHhcCCCCcEEE-EeccchhhhhhcccccCCCCccEEEeccCCChhhHHHH
Q 013877 171 DIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (434)
Q Consensus 171 ~~~Ea~~~ADiViLavpd~a~--~~vl~eI~~~Lk~g~iL~-~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~l 247 (434)
++ +++++||+||+++|+... .+++.++.++++++++|+ .++++.+..+.+ .....-+++..||..|.+.
T Consensus 387 d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~---~~~~~~~~ig~hf~~P~~~---- 458 (715)
T 1wdk_A 387 SY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAK---ALKRPENFVGMHFFNPVHM---- 458 (715)
T ss_dssp SS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGG---GCSCGGGEEEEECCSSTTT----
T ss_pred CH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHH---HhcCccceEEEEccCCccc----
Confidence 55 778999999999997764 468889999999999875 567777765544 2223347999999887654
Q ss_pred HhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhch-H-HHHHHHHHHHHH
Q 013877 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGA-V-HGIVESLFRRFT 325 (434)
Q Consensus 248 y~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~-~-~aliea~~~~~v 325 (434)
+-..-+..+...+.+..+.+..++..+|...+.-. +. .-| +++- + +.+.|+ . .++
T Consensus 459 ----------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~----d~--~Gf-----i~Nril~~~~~Ea-~-~l~ 515 (715)
T 1wdk_A 459 ----------MPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVN----DC--PGF-----LVNRVLFPYFGGF-A-KLV 515 (715)
T ss_dssp ----------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEE----SC--TTT-----THHHHHHHHHHHH-H-HHH
T ss_pred ----------CceEEEEECCCCCHHHHHHHHHHHHHhCCEeEEEc----CC--CCh-----hhhHHHHHHHHHH-H-HHH
Confidence 11222445667788999999999999996421111 11 111 2222 1 224444 3 344
Q ss_pred HcCCCHHHHHHHHHHHH---HHHHHHHHHHhcHHHHH
Q 013877 326 ENGMNEDLAYKNTVECI---TGIISKIISTQGMLAVY 359 (434)
Q Consensus 326 ~~Gl~~e~A~~~~~e~l---~Gli~~li~e~G~~~m~ 359 (434)
+.|+++++..... ... .| --.++-..|++..+
T Consensus 516 ~~G~~~~~id~~~-~~~G~p~G-p~~l~D~vGld~~~ 550 (715)
T 1wdk_A 516 SAGVDFVRIDKVM-EKFGWPMG-PAYLMDVVGIDTGH 550 (715)
T ss_dssp HTTCCHHHHHHHH-HHHTCSSC-HHHHHHHHCHHHHH
T ss_pred HCCCCHHHHHHHH-HHcCCCCC-HHHHHHHhhHHHHH
Confidence 5699998765543 221 03 24455555664433
No 68
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.23 E-value=1.3e-10 Score=122.24 Aligned_cols=152 Identities=17% Similarity=0.061 Sum_probs=103.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccC-CCcCCHHhhhc---cCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-GTLGDIYETIS---GSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~-~~~~~~~Ea~~---~ADiViLavp 187 (434)
++|||||+|+||.++|++|.+. |++|++++|..++ .+...+.|..... ....+++|+++ ++|+||++||
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~------G~~V~v~dr~~~~-~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp 77 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVSK-VDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVK 77 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTHH-HHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred CEEEEEChhHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecC
Confidence 7899999999999999999999 9999888776544 4444443321000 00367888887 4999999999
Q ss_pred ch-HHHHHHHHHHhcCCCCcEEEEeccchh---hhhhcccccCCCCccEEEeccCCChhhHHHHHhhcccccCCCceEEE
Q 013877 188 DA-AQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (434)
Q Consensus 188 d~-a~~~vl~eI~~~Lk~g~iL~~s~G~~i---~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~~~~G~Gv~ali 263 (434)
+. ...++++++.++|++|++|++.+.... ....+ .....++.++.. |-.-+.. .-+.| . + +
T Consensus 78 ~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~--~l~~~Gi~fvd~-pVsGg~~---gA~~G-------~-~-i 142 (484)
T 4gwg_A 78 AGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCR--DLKAKGILFVGS-GVSGGEE---GARYG-------P-S-L 142 (484)
T ss_dssp SSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEEE-EEESHHH---HHHHC-------C-E-E
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHH--HHHhhccccccC-CccCCHH---HHhcC-------C-e-e
Confidence 96 566899999999999999988765432 11111 011346777753 6332222 22233 4 4 3
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCC
Q 013877 264 AVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 264 av~qdvsg~a~e~a~~la~aiG~~ 287 (434)
.+.. +.++.+.+..++..+|..
T Consensus 143 m~GG--~~ea~~~v~pll~~ig~~ 164 (484)
T 4gwg_A 143 MPGG--NKEAWPHIKTIFQGIAAK 164 (484)
T ss_dssp EEEE--CGGGHHHHHHHHHHHSCB
T ss_pred ecCC--CHHHHHHHHHHHHHhcCc
Confidence 3444 468899999999999964
No 69
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.22 E-value=2.9e-11 Score=119.75 Aligned_cols=159 Identities=18% Similarity=0.110 Sum_probs=108.3
Q ss_pred hhccCCcccc-ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC
Q 013877 93 IVRGGRDLFN-LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (434)
Q Consensus 93 ~~~~~~~~f~-~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~ 171 (434)
-+|+|+|... .....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+ +.+.+.|+. ..+
T Consensus 124 ~~~~g~w~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~-----~~~ 189 (307)
T 1wwk_A 124 KMREGVWAKKEAMGIELEG-KTIGIIGFGRIGYQVAKIANAL------GMNILLYDPYPNE--ERAKEVNGK-----FVD 189 (307)
T ss_dssp HHTTTCCCTTTCCBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHTTCE-----ECC
T ss_pred HHHcCCCCccCcCCcccCC-ceEEEEccCHHHHHHHHHHHHC------CCEEEEECCCCCh--hhHhhcCcc-----ccC
Confidence 4577888531 22367899 9999999999999999999988 9998776665433 456677876 347
Q ss_pred HHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEeccch-------hhhhhcccccCCCCccEEEeccCCChh
Q 013877 172 IYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~G~~-------i~~~~~~~i~~~~di~VI~v~Pn~pg~ 242 (434)
.++++++||+|++++|.... ..++ ++..+.||+|++|+.++--. ...+++ +.......||+..+|.-+.+
T Consensus 190 l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~-g~i~ga~lDv~~~eP~~~~~ 268 (307)
T 1wwk_A 190 LETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKE-GWIAGAGLDVFEEEPLPKDH 268 (307)
T ss_dssp HHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHH-TSSSEEEESCCSSSSCCTTC
T ss_pred HHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHh-CCCcEEEEecCCCCCCCCCC
Confidence 89999999999999997664 4555 35778899999988654322 112222 11112356777777853333
Q ss_pred hHHHHHhhcccccCCCceEEEeecCC-CCHHHHHHH
Q 013877 243 SVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVA 277 (434)
Q Consensus 243 ~vr~ly~~G~~~~G~Gv~aliav~qd-vsg~a~e~a 277 (434)
. +|. .-+.++++|.. .|.++.+..
T Consensus 269 ~---L~~--------~~nviltPh~~~~t~~~~~~~ 293 (307)
T 1wwk_A 269 P---LTK--------FDNVVLTPHIGASTVEAQERA 293 (307)
T ss_dssp G---GGG--------CTTEEECSSCTTCBHHHHHHH
T ss_pred h---HHh--------CCCEEECCccccCcHHHHHHH
Confidence 2 333 36788999874 444554443
No 70
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.20 E-value=1.5e-11 Score=122.49 Aligned_cols=161 Identities=16% Similarity=0.139 Sum_probs=106.3
Q ss_pred hhhccCCccc----cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEec-CCchhHHHHHHcCccccC
Q 013877 92 YIVRGGRDLF----NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFTEEN 166 (434)
Q Consensus 92 ~~~~~~~~~f----~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r-~~~~s~~~A~~~G~~~~~ 166 (434)
.-+|+|+|.. ......+.| ++|||||+|+||.++|++|+.. |++|+++++ ...+ ..+.+.|+..
T Consensus 124 ~~~~~g~w~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~--~~~~~~g~~~-- 192 (320)
T 1gdh_A 124 KMIRTRSWPGWEPLELVGEKLDN-KTLGIYGFGSIGQALAKRAQGF------DMDIDYFDTHRASS--SDEASYQATF-- 192 (320)
T ss_dssp HHHHTTCCCCCCTTTTCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSCCCH--HHHHHHTCEE--
T ss_pred HHHHcCCCCccccccccCcCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCcCh--hhhhhcCcEE--
Confidence 3467788851 112357899 9999999999999999999988 999877766 5333 3555667763
Q ss_pred CCcCCHHhhhccCCEEEEeecchH-HHHHH-HHHHhcCCCCcEEEEe-ccc--h----hhhhhcccccCCCCccEEEecc
Q 013877 167 GTLGDIYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLS-HGF--L----LGHLQSMGLDFPKNIGVIAVCP 237 (434)
Q Consensus 167 ~~~~~~~Ea~~~ADiViLavpd~a-~~~vl-~eI~~~Lk~g~iL~~s-~G~--~----i~~~~~~~i~~~~di~VI~v~P 237 (434)
..+.+|++++||+|++++|... ...++ ++..+.||+|++|+.+ .|- . ...+.+..+ .....||+..+|
T Consensus 193 --~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i-~gA~lDv~~~eP 269 (320)
T 1gdh_A 193 --HDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRL-AYAGFDVFAGEP 269 (320)
T ss_dssp --CSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSE-EEEEESCCTTTT
T ss_pred --cCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCC-cEEEEeCCCCCC
Confidence 3478999999999999999765 34566 3577899999988855 442 1 112222111 112456666677
Q ss_pred CCChhhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHHHH
Q 013877 238 KGMGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVAL 278 (434)
Q Consensus 238 n~pg~~vr~ly~~G~~~~G~Gv~aliav~qd-vsg~a~e~a~ 278 (434)
.+.+ .+|. .-+.++++|.. .|.++.+...
T Consensus 270 -~~~~---~L~~--------~~nviltPH~~~~t~~~~~~~~ 299 (320)
T 1gdh_A 270 -NINE---GYYD--------LPNTFLFPHIGSAATQAREDMA 299 (320)
T ss_dssp -SCCT---TGGG--------CTTEEECSSCTTCBHHHHHHHH
T ss_pred -CCCC---hhhh--------CCCEEECCcCCcCcHHHHHHHH
Confidence 2222 2343 36888999974 4455544443
No 71
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.19 E-value=1.4e-10 Score=113.94 Aligned_cols=152 Identities=20% Similarity=0.169 Sum_probs=102.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccC--CC--------cCCHHhhhccCCE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN--GT--------LGDIYETISGSDL 181 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~--~~--------~~~~~Ea~~~ADi 181 (434)
+||+|||+|+||.++|..|.++ |++|.+..|.. .+..++.|+.... +. +.+. +.++.+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~---~~~i~~~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~D~ 72 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS------GEDVHFLLRRD---YEAIAGNGLKVFSINGDFTLPHVKGYRAP-EEIGPMDL 72 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT------SCCEEEECSTT---HHHHHHTCEEEEETTCCEEESCCCEESCH-HHHCCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCc---HHHHHhCCCEEEcCCCeEEEeeceeecCH-HHcCCCCE
Confidence 6899999999999999999999 99988877753 3555667764311 10 1234 44689999
Q ss_pred EEEeecchHHHHHHHHHHhcCCCCcEE-EEeccch-hhhhhcccccCCCCccEEEec------cCCChhhHHHHHhhccc
Q 013877 182 VLLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFL-LGHLQSMGLDFPKNIGVIAVC------PKGMGPSVRRLYVQGKE 253 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~g~iL-~~s~G~~-i~~~~~~~i~~~~di~VI~v~------Pn~pg~~vr~ly~~G~~ 253 (434)
||++||+.+..+++++|.|+++++++| ++..|+. ...+.+ .+|++ .|+..+ -.+|+... .
T Consensus 73 vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~---~~~~~-~v~~~~~~~~a~~~~p~~v~-----~--- 140 (312)
T 3hn2_A 73 VLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEEALAT---LFGAE-RIIGGVAFLCSNRGEPGEVH-----H--- 140 (312)
T ss_dssp EEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHH---HTCGG-GEEEEEEEEECCBCSSSEEE-----E---
T ss_pred EEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHH---HCCCC-cEEEEEEEeeeEEcCCcEEE-----E---
Confidence 999999999999999999999998865 5778985 444444 34433 455443 24455542 1
Q ss_pred ccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 254 INGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 254 ~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
.|.|... ++.....+.+..+...+++...|..
T Consensus 141 -~~~g~~~-ig~~~~~~~~~~~~l~~~l~~~g~~ 172 (312)
T 3hn2_A 141 -LGAGRII-LGEFLPRDTGRIEELAAMFRQAGVD 172 (312)
T ss_dssp -CEEEEEE-EEESSCCCSHHHHHHHHHHHHTTCC
T ss_pred -CCCCeEE-EecCCCCccHHHHHHHHHHHhCCCC
Confidence 1234333 4433333345566667888887764
No 72
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.19 E-value=7.9e-10 Score=115.11 Aligned_cols=209 Identities=13% Similarity=0.099 Sum_probs=129.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-----------cCcccc-------CCCcCCH
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-------NGTLGDI 172 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~-------~~~~~~~ 172 (434)
++||+|||+|.||.++|.+|.++ |++|++.++. ....+.+.+ .|.... .....+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~------G~~V~l~D~~-~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 109 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV------GISVVAVESD-PKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST 109 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEECSS-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC------CCeEEEEECC-HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH
Confidence 48999999999999999999999 9998776654 333333322 121000 0002355
Q ss_pred HhhhccCCEEEEeecchHH--HHHHHHHHhcCCCCcEEEE-eccchhhhhhcccccCCCCccEEEeccCCChhhHHHHHh
Q 013877 173 YETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILGL-SHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYV 249 (434)
Q Consensus 173 ~Ea~~~ADiViLavpd~a~--~~vl~eI~~~Lk~g~iL~~-s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~ 249 (434)
+++++||+||+++|.... .+++.++.++++++++|+. +.+..+..+.. ......+++..||-.|.+.
T Consensus 110 -~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~la~---~~~~~~~~ig~hf~~P~~~------ 179 (463)
T 1zcj_A 110 -KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS---STDRPQLVIGTHFFSPAHV------ 179 (463)
T ss_dssp -GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTTT------
T ss_pred -HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHHHH---HhcCCcceEEeecCCCccc------
Confidence 678899999999997653 5788899999999998764 34565555443 2233357899999776543
Q ss_pred hcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHH-HHHHHHHHHHHHcC
Q 013877 250 QGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVH-GIVESLFRRFTENG 328 (434)
Q Consensus 250 ~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~-aliea~~~~~v~~G 328 (434)
+-..-+..+...+.+..+.+..++..+|... +.. .+ ..-| +++-+. .++..++ .+++.|
T Consensus 180 --------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~-v~v---~~--~~gf-----i~Nrll~~~~~ea~-~l~~~G 239 (463)
T 1zcj_A 180 --------MRLLEVIPSRYSSPTTIATVMSLSKKIGKIG-VVV---GN--CYGF-----VGNRMLAPYYNQGF-FLLEEG 239 (463)
T ss_dssp --------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEE-EEB---CC--STTT-----THHHHHHHHHHHHH-HHHHTT
T ss_pred --------ceeEEEeCCCCCCHHHHHHHHHHHHHhCCEE-EEE---CC--CccH-----HHHHHHHHHHHHHH-HHHHcC
Confidence 1223345566778899999999999999642 111 11 1112 223322 2332233 345669
Q ss_pred CCHHHHHHHHHHHH---HHHHHHHHHHhcHHHH
Q 013877 329 MNEDLAYKNTVECI---TGIISKIISTQGMLAV 358 (434)
Q Consensus 329 l~~e~A~~~~~e~l---~Gli~~li~e~G~~~m 358 (434)
+++++..... ..+ .| -..++-..|++..
T Consensus 240 ~~~~~id~~~-~~~g~p~G-p~~l~D~~GlD~~ 270 (463)
T 1zcj_A 240 SKPEDVDGVL-EEFGFKMG-PFRVSDLAGLDVG 270 (463)
T ss_dssp CCHHHHHHHH-HHHTCSSC-HHHHHHHHCHHHH
T ss_pred CCHHHHHHHH-HHcCCCCc-HHHHHHHcchHHH
Confidence 9998765533 211 13 2455556676443
No 73
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.18 E-value=1.4e-09 Score=119.35 Aligned_cols=210 Identities=11% Similarity=0.059 Sum_probs=130.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-----------cCcccc-------C--CCcC
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-------N--GTLG 170 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~-------~--~~~~ 170 (434)
|+||+|||+|.||.++|.+|.++ |++|++++++.+ ..+.+.+ .|.... + ....
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~~-~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~ 384 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS------NYPVILKEVNEK-FLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSL 384 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHH-HHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEES
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeC
Confidence 58999999999999999999999 999887776533 2333221 232100 0 0123
Q ss_pred CHHhhhccCCEEEEeecchHH--HHHHHHHHhcCCCCcEEE-EeccchhhhhhcccccCCCCccEEEeccCCChhhHHHH
Q 013877 171 DIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (434)
Q Consensus 171 ~~~Ea~~~ADiViLavpd~a~--~~vl~eI~~~Lk~g~iL~-~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~l 247 (434)
++ +++++||+||+++|+... .+++.++.++++++++|+ .++++.+..+.+ .....-+++..|+--|.+.
T Consensus 385 d~-~~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~---~~~~p~~~iG~hf~~P~~~---- 456 (725)
T 2wtb_A 385 DY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGE---RTKSQDRIVGAHFFSPAHI---- 456 (725)
T ss_dssp SS-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTT---TCSCTTTEEEEEECSSTTT----
T ss_pred CH-HHHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHH---HhcCCCCEEEecCCCCccc----
Confidence 45 678999999999998764 368889999999999875 567777665543 2222236888998666443
Q ss_pred HhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchH--HHHHHHHHHHHH
Q 013877 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAV--HGIVESLFRRFT 325 (434)
Q Consensus 248 y~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~--~aliea~~~~~v 325 (434)
+-..-+..+...+.+..+.+..++..+|... +.. .+. .-| +++-+ +.+.|+ .. ++
T Consensus 457 ----------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~-v~v---~d~--~Gf-----i~Nril~~~~~Ea-~~-l~ 513 (725)
T 2wtb_A 457 ----------MPLLEIVRTNHTSAQVIVDLLDVGKKIKKTP-VVV---GNC--TGF-----AVNRMFFPYTQAA-MF-LV 513 (725)
T ss_dssp ----------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEE-EEE---ESS--TTT-----THHHHHHHHHHHH-HH-HH
T ss_pred ----------CceEEEEECCCCCHHHHHHHHHHHHHhCCEE-EEE---CCC--ccH-----HHHHHHHHHHHHH-HH-HH
Confidence 1122344566678899999999999999642 111 110 111 22222 224444 33 44
Q ss_pred HcCCCHHHHHHHHHHHHH---HHHHHHHHHhcHHHHHH
Q 013877 326 ENGMNEDLAYKNTVECIT---GIISKIISTQGMLAVYN 360 (434)
Q Consensus 326 ~~Gl~~e~A~~~~~e~l~---Gli~~li~e~G~~~m~~ 360 (434)
+.|+++++..... ...- | --+++-..|++..+.
T Consensus 514 ~~G~~~e~id~~~-~~~g~p~G-p~~l~D~vGld~~~~ 549 (725)
T 2wtb_A 514 ECGADPYLIDRAI-SKFGMPMG-PFRLCDLVGFGVAIA 549 (725)
T ss_dssp HTTCCHHHHHHHH-HHHTCSSC-HHHHHHHHCHHHHHH
T ss_pred HCCCCHHHHHHHH-HHcCCCCC-HHHHHHHhchHHHHH
Confidence 5599998776644 2211 3 244555566644443
No 74
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.17 E-value=3.7e-11 Score=111.94 Aligned_cols=138 Identities=17% Similarity=0.160 Sum_probs=91.5
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
..+.+ +||+|||+|+||.++|..|.+. |++|++++|... +++++|+||++
T Consensus 15 ~~~~~-~~I~iiG~G~mG~~la~~l~~~------g~~V~~~~~~~~-----------------------~~~~aD~vi~a 64 (209)
T 2raf_A 15 LYFQG-MEITIFGKGNMGQAIGHNFEIA------GHEVTYYGSKDQ-----------------------ATTLGEIVIMA 64 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCC-----------------------CSSCCSEEEEC
T ss_pred cccCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH-----------------------HhccCCEEEEc
Confidence 55667 8999999999999999999998 999877765422 35679999999
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEE-Eeccch---------------hhhhhcccccCCCCccEEE-eccCCChhhHHHHH
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILG-LSHGFL---------------LGHLQSMGLDFPKNIGVIA-VCPKGMGPSVRRLY 248 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~-~s~G~~---------------i~~~~~~~i~~~~di~VI~-v~Pn~pg~~vr~ly 248 (434)
+|+....++++++.+.++ +++|+ .+.|+. ...+++ .+| +.+++. ++| ..++.....-
T Consensus 65 v~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~---~l~-~~~vv~~~~~-~~~p~~~~~~ 138 (209)
T 2raf_A 65 VPYPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQ---QLP-DSQVLKAFNT-TFAATLQSGQ 138 (209)
T ss_dssp SCHHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHH---HCT-TSEEEECSTT-SCHHHHHHSE
T ss_pred CCcHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHH---HCC-CCcEEEeeec-ccHhhccccc
Confidence 999888999999988888 88776 456665 233333 334 467888 444 2233321111
Q ss_pred hhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCC
Q 013877 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (434)
Q Consensus 249 ~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~ 286 (434)
.. |.+... +.+.. .+.++.+.+.+++..+|.
T Consensus 139 ~~-----g~~~~~-~~~~g-~~~~~~~~v~~ll~~~G~ 169 (209)
T 2raf_A 139 VN-----GKEPTT-VLVAG-NDDSAKQRFTRALADSPL 169 (209)
T ss_dssp ET-----TTEECE-EEEEE-SCHHHHHHHHHHTTTSSC
T ss_pred cC-----CCCCce-eEEcC-CCHHHHHHHHHHHHHcCC
Confidence 11 112223 22222 256888999999999986
No 75
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.13 E-value=1.3e-10 Score=117.09 Aligned_cols=154 Identities=19% Similarity=0.218 Sum_probs=94.4
Q ss_pred hhhccCCcccc----ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCC
Q 013877 92 YIVRGGRDLFN----LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG 167 (434)
Q Consensus 92 ~~~~~~~~~f~----~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~ 167 (434)
.-+|.|+|... .+ ..+.| +||||||+|+||.++|++|+.. |++|+++++...+ ..++..
T Consensus 150 ~~~~~g~W~~~~~~~~~-~~l~g-ktiGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~------~~~~~~--- 212 (340)
T 4dgs_A 150 RLVREGRWAAGEQLPLG-HSPKG-KRIGVLGLGQIGRALASRAEAF------GMSVRYWNRSTLS------GVDWIA--- 212 (340)
T ss_dssp HHHHTTCC------CCC-CCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSCCT------TSCCEE---
T ss_pred HHHhcCCcccccCcCcc-ccccC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCccc------ccCcee---
Confidence 35678888643 23 68999 9999999999999999999988 9998777665332 234442
Q ss_pred CcCCHHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec-cchh------hhhhcccccCCCCccEEEeccC
Q 013877 168 TLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFLL------GHLQSMGLDFPKNIGVIAVCPK 238 (434)
Q Consensus 168 ~~~~~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~-G~~i------~~~~~~~i~~~~di~VI~v~Pn 238 (434)
..+.+|++++||+|++++|.... ..++ +++.+.||+|++|+.++ |-.+ ..+++ +-.-....||..--|.
T Consensus 213 -~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~-g~i~gA~LDVf~~EP~ 290 (340)
T 4dgs_A 213 -HQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKS-GTIAGAGLDVFVNEPA 290 (340)
T ss_dssp -CSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC---------------CCSSEEEESCCSSSSS
T ss_pred -cCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHc-CCceEEEeCCcCCCCC
Confidence 46899999999999999996555 4566 46888999999988654 4221 11111 1111124566666664
Q ss_pred CChhhHHHHHhhcccccCCCceEEEeecC-CCCHHHHHH
Q 013877 239 GMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (434)
Q Consensus 239 ~pg~~vr~ly~~G~~~~G~Gv~aliav~q-dvsg~a~e~ 276 (434)
.+. .++.. -+.+++||- ..|.++.+.
T Consensus 291 ~~~----~L~~~--------~nvilTPHia~~t~e~~~~ 317 (340)
T 4dgs_A 291 IRS----EFHTT--------PNTVLMPHQGSATVETRMA 317 (340)
T ss_dssp CCS----HHHHS--------SSEEECSSCSSCCHHHHHH
T ss_pred Ccc----chhhC--------CCEEEcCcCCcCCHHHHHH
Confidence 332 23432 467788886 344454443
No 76
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.13 E-value=1.6e-10 Score=107.94 Aligned_cols=148 Identities=18% Similarity=0.177 Sum_probs=99.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchHH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a~ 191 (434)
+||+|||+|.||.+++++|.+. |++|++.+|+.+ ..+...+.|+.. .+..++++++|+||+++|+...
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~------g~~V~~~~r~~~-~~~~~~~~g~~~-----~~~~~~~~~~DvVi~av~~~~~ 96 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS------GFKVVVGSRNPK-RTARLFPSAAQV-----TFQEEAVSSPEVIFVAVFREHY 96 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSHH-HHHHHSBTTSEE-----EEHHHHTTSCSEEEECSCGGGS
T ss_pred CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHcCCce-----ecHHHHHhCCCEEEECCChHHH
Confidence 7899999999999999999998 998887766533 333443446553 3788899999999999999776
Q ss_pred HHHHHHHHhcCCCCcEEE-Eeccchhhhh----------hcccccCCCCccEEEeccCCC-hhhHHHHHhhcccccCCCc
Q 013877 192 ADNYEKIFSCMKPNSILG-LSHGFLLGHL----------QSMGLDFPKNIGVIAVCPKGM-GPSVRRLYVQGKEINGAGI 259 (434)
Q Consensus 192 ~~vl~eI~~~Lk~g~iL~-~s~G~~i~~~----------~~~~i~~~~di~VI~v~Pn~p-g~~vr~ly~~G~~~~G~Gv 259 (434)
.++++ +.+.+ ++++|+ .+.|..+..+ .+ .+| +..|++.+ |.. +... ..|-. .|-
T Consensus 97 ~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~---~l~-~~~vv~~~-n~~~~~~~----~~~~~---~g~ 162 (215)
T 2vns_A 97 SSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLAS---LFP-TCTVVKAF-NVISAWTL----QAGPR---DGN 162 (215)
T ss_dssp GGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHH---HCT-TSEEEEEC-TTBCHHHH----HTCSC---SSC
T ss_pred HHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHH---HCC-CCeEEecc-ccccHhHh----ccccc---CCc
Confidence 67765 66666 777665 5667654322 12 334 45788877 443 2221 11110 122
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 260 NSSFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 260 ~aliav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
+.++... .+.++.+.+..++..+|..
T Consensus 163 ~~~~~~g--~~~~~~~~v~~ll~~~G~~ 188 (215)
T 2vns_A 163 RQVPICG--DQPEAKRAVSEMALAMGFM 188 (215)
T ss_dssp CEEEEEE--SCHHHHHHHHHHHHHTTCE
T ss_pred eeEEEec--CCHHHHHHHHHHHHHcCCc
Confidence 2222223 2678999999999999974
No 77
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.12 E-value=1.2e-09 Score=112.38 Aligned_cols=199 Identities=13% Similarity=0.104 Sum_probs=119.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-------------------cC-ccccCCCcCC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-------------------~G-~~~~~~~~~~ 171 (434)
+||+|||+|.||.++|..|.+. |++|++.++. .+..+...+ .| +.. ..+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~------G~~V~~~d~~-~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~----t~~ 69 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR------GHEVIGVDVS-STKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG----TTD 69 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----ESC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE----eCC
Confidence 5899999999999999999999 9998766554 333333333 22 222 457
Q ss_pred HHhhhccCCEEEEeecchH----------HHHHHHHHHhcCCC---CcEEEEeccchhhh--------hhcc-cccCCCC
Q 013877 172 IYETISGSDLVLLLISDAA----------QADNYEKIFSCMKP---NSILGLSHGFLLGH--------LQSM-GLDFPKN 229 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~a----------~~~vl~eI~~~Lk~---g~iL~~s~G~~i~~--------~~~~-~i~~~~d 229 (434)
.++++++||+||+|+|... ..+++++|.+++++ +++|++.+++.... +++. +.....+
T Consensus 70 ~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~ 149 (436)
T 1mv8_A 70 FKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVD 149 (436)
T ss_dssp HHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTT
T ss_pred HHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCc
Confidence 8889999999999998655 67888899999999 88887665443211 1110 1111122
Q ss_pred ccEEEeccCC--ChhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchh
Q 013877 230 IGVIAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG 307 (434)
Q Consensus 230 i~VI~v~Pn~--pg~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~t 307 (434)
.. +...|.. ||..+.+.+. .+.++ +..+ +.++.+.+..++..+|.. ++.+.... .+.-.+.+.+
T Consensus 150 ~~-v~~~Pe~~~~G~~~~~~~~---------~~~iv-~G~~-~~~~~~~~~~l~~~~~~~-v~~~~~~~-ae~~Kl~~N~ 215 (436)
T 1mv8_A 150 FG-VGTNPEFLRESTAIKDYDF---------PPMTV-IGEL-DKQTGDLLEEIYRELDAP-IIRKTVEV-AEMIKYTCNV 215 (436)
T ss_dssp BE-EEECCCCCCTTSHHHHHHS---------CSCEE-EEES-SHHHHHHHHHHHTTSSSC-EEEEEHHH-HHHHHHHHHH
T ss_pred EE-EEECcccccccccchhccC---------CCEEE-EEcC-CHHHHHHHHHHHhccCCC-EEcCCHHH-HHHHHHHHHH
Confidence 23 3456643 3444332222 11212 2222 578889999999999863 22232111 1111111111
Q ss_pred hhhchHHHHHHHHHHHHHHcCCCHHHHHH
Q 013877 308 ILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (434)
Q Consensus 308 vL~G~~~aliea~~~~~v~~Gl~~e~A~~ 336 (434)
.+ ...-+++..+...+.+.|+++++...
T Consensus 216 ~~-a~~ia~~nE~~~l~~~~Gid~~~v~~ 243 (436)
T 1mv8_A 216 WH-AAKVTFANEIGNIAKAVGVDGREVMD 243 (436)
T ss_dssp HH-HHHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 11 11224677778888899999876655
No 78
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.11 E-value=1.2e-10 Score=116.96 Aligned_cols=156 Identities=15% Similarity=0.058 Sum_probs=107.5
Q ss_pred hhccCCccccc-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC
Q 013877 93 IVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (434)
Q Consensus 93 ~~~~~~~~f~~-~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~ 171 (434)
-+|+|+|.... ....+.| ++|||||+|.||.++|+.|+.. |++|+++++...+ ..+.+.|+. ..+
T Consensus 147 ~~~~g~W~~~~~~~~~l~g-~tvgIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~-----~~~ 212 (335)
T 2g76_A 147 SMKDGKWERKKFMGTELNG-KTLGILGLGRIGREVATRMQSF------GMKTIGYDPIISP--EVSASFGVQ-----QLP 212 (335)
T ss_dssp HHHTTCCCTGGGCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSSCH--HHHHHTTCE-----ECC
T ss_pred HHHcCCCCccCCCCcCCCc-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCcch--hhhhhcCce-----eCC
Confidence 46778895432 2367999 9999999999999999999987 9998766665333 456677875 358
Q ss_pred HHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEeccch-------hhhhhcccccCCCCccEEEeccCCChh
Q 013877 172 IYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~G~~-------i~~~~~~~i~~~~di~VI~v~Pn~pg~ 242 (434)
.+|++++||+|++++|.... ..++ +++.+.||+|++|+.++--. ...+++..+ -...+||+..+|. +..
T Consensus 213 l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i-~gA~lDV~~~EP~-~~~ 290 (335)
T 2g76_A 213 LEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQC-AGAALDVFTEEPP-RDR 290 (335)
T ss_dssp HHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSE-EEEEESCCSSSSC-SCC
T ss_pred HHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCc-cEEEEeecCCCCC-CCc
Confidence 89999999999999998764 4566 46889999999988665322 112222111 1124577878883 222
Q ss_pred hHHHHHhhcccccCCCceEEEeecCC-CCHHHHH
Q 013877 243 SVRRLYVQGKEINGAGINSSFAVHQD-VDGRATN 275 (434)
Q Consensus 243 ~vr~ly~~G~~~~G~Gv~aliav~qd-vsg~a~e 275 (434)
.+|.. -+.++++|.. .|.++.+
T Consensus 291 ---~L~~~--------~nvilTPH~~~~t~e~~~ 313 (335)
T 2g76_A 291 ---ALVDH--------ENVISCPHLGASTKEAQS 313 (335)
T ss_dssp ---HHHHS--------TTEEECSSCTTCBHHHHH
T ss_pred ---hHHhC--------CCEEECCcCCCCCHHHHH
Confidence 34542 6788999873 4445444
No 79
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.10 E-value=1.2e-10 Score=117.75 Aligned_cols=107 Identities=21% Similarity=0.218 Sum_probs=83.3
Q ss_pred hhccCCccccc-----------cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcC
Q 013877 93 IVRGGRDLFNL-----------LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG 161 (434)
Q Consensus 93 ~~~~~~~~f~~-----------~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G 161 (434)
-+|+|+|.... ....+.| ++|||||+|.||.++|+.|+.. |++|+++++. ...+.+.+.|
T Consensus 132 ~~~~g~W~~~~~~~~~~~~~~~~~~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~--~~~~~~~~~g 202 (352)
T 3gg9_A 132 SLKHGAWQQSGLKSTTMPPNFGIGRVLKG-QTLGIFGYGKIGQLVAGYGRAF------GMNVLVWGRE--NSKERARADG 202 (352)
T ss_dssp HHHTTCTTCCCCCCTTSCTTTTSBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSH--HHHHHHHHTT
T ss_pred HHHcCCCCcccccccccccccccCccCCC-CEEEEEeECHHHHHHHHHHHhC------CCEEEEECCC--CCHHHHHhcC
Confidence 35667775421 2367899 9999999999999999999988 9998766654 2345666778
Q ss_pred ccccCCCcCCHHhhhccCCEEEEeecchHH-HHHHH-HHHhcCCCCcEEEEec
Q 013877 162 FTEENGTLGDIYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH 212 (434)
Q Consensus 162 ~~~~~~~~~~~~Ea~~~ADiViLavpd~a~-~~vl~-eI~~~Lk~g~iL~~s~ 212 (434)
+.. +.+.+|++++||+|++++|.... ..++. +.++.||+|++|+.++
T Consensus 203 ~~~----~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 251 (352)
T 3gg9_A 203 FAV----AESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTS 251 (352)
T ss_dssp CEE----CSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred ceE----eCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECC
Confidence 864 45899999999999999996654 34554 6789999999998765
No 80
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.10 E-value=1.3e-09 Score=113.35 Aligned_cols=200 Identities=13% Similarity=0.115 Sum_probs=122.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-------------------cC-ccccCCCcCC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-------------------~G-~~~~~~~~~~ 171 (434)
+||+|||+|.||.++|.+|.+. |++|+++++. ....+...+ .| +.. ..+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~------G~~V~~~D~~-~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~----t~d 71 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL------GANVRCIDTD-RNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF----GTE 71 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE----ESC
T ss_pred CEEEEECcCHHHHHHHHHHHhc------CCEEEEEECC-HHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE----ECC
Confidence 6999999999999999999999 9998766654 333333332 11 221 457
Q ss_pred HHhhhccCCEEEEeecch----------HHHHHHHHHHhcCCCCcEEEEeccchhh-------hhhcccccCC--CCccE
Q 013877 172 IYETISGSDLVLLLISDA----------AQADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFP--KNIGV 232 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~----------a~~~vl~eI~~~Lk~g~iL~~s~G~~i~-------~~~~~~i~~~--~di~V 232 (434)
.++++++||+||+|+|.. ...+++++|.+++++|++|++.+++... .+.+...... .++ .
T Consensus 72 ~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~-~ 150 (450)
T 3gg2_A 72 IEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDF-D 150 (450)
T ss_dssp HHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCE-E
T ss_pred HHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcce-e
Confidence 889999999999999977 6778999999999999998887765321 1111000111 222 3
Q ss_pred EEeccCCC--hhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC--cccccchhhhcccccccchhh
Q 013877 233 IAVCPKGM--GPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP--FTFATTLEQEYRSDIFGERGI 308 (434)
Q Consensus 233 I~v~Pn~p--g~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~--~~iettf~~E~~~Dlfge~tv 308 (434)
+...|... |..+++... .+.++ +.. .+.++.+.+..++..++.. .++.+.. ...+.-.+.+.+.
T Consensus 151 v~~~Pe~a~eG~~~~~~~~---------p~~iv-vG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~-~~aE~~Kl~~N~~ 218 (450)
T 3gg2_A 151 IASNPEFLKEGNAIDDFMK---------PDRVV-VGV-DSDRARELITSLYKPMLLNNFRVLFMDI-ASAEMTKYAANAM 218 (450)
T ss_dssp EEECCCCCCTTSHHHHHHS---------CSCEE-EEE-SSHHHHHHHHHHHTTTCCSCCCEEEECH-HHHHHHHHHHHHH
T ss_pred EEechhhhcccchhhhccC---------CCEEE-EEc-CCHHHHHHHHHHHHHHhcCCCeEEecCH-HHHHHHHHHHHHH
Confidence 45667532 322221111 12222 222 1468899999999998852 1222211 1111222333322
Q ss_pred hhchHHHHHHHHHHHHHHcCCCHHHHHH
Q 013877 309 LLGAVHGIVESLFRRFTENGMNEDLAYK 336 (434)
Q Consensus 309 L~G~~~aliea~~~~~v~~Gl~~e~A~~ 336 (434)
+ ...-+++.-+...+.+.|+++++.+.
T Consensus 219 ~-a~~ia~~nE~~~l~~~~Gid~~~v~~ 245 (450)
T 3gg2_A 219 L-ATRISFMNDVANLCERVGADVSMVRL 245 (450)
T ss_dssp H-HHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 2 22334666677788889999987766
No 81
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.09 E-value=1.1e-10 Score=115.29 Aligned_cols=102 Identities=15% Similarity=0.148 Sum_probs=79.5
Q ss_pred hhccCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCH
Q 013877 93 IVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (434)
Q Consensus 93 ~~~~~~~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~ 172 (434)
-+|+|+|..... ..+.| +||||||+|+||.++|+.|+.. |++|+++++...+. + .+.. ..+.
T Consensus 106 ~~~~g~w~~~~~-~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~-----~~~~----~~~l 167 (290)
T 3gvx_A 106 LMKAGIFRQSPT-TLLYG-KALGILGYGGIGRRVAHLAKAF------GMRVIAYTRSSVDQ-N-----VDVI----SESP 167 (290)
T ss_dssp HHHTTCCCCCCC-CCCTT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSCCCT-T-----CSEE----CSSH
T ss_pred HhhhcccccCCc-eeeec-chheeeccCchhHHHHHHHHhh------CcEEEEEecccccc-c-----cccc----cCCh
Confidence 367788866543 67899 9999999999999999999988 99988776653321 1 1222 4589
Q ss_pred HhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec
Q 013877 173 YETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 173 ~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
+|++++||+|++++|.... ..++ ++..+.||+|++|+.++
T Consensus 168 ~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 209 (290)
T 3gvx_A 168 ADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVA 209 (290)
T ss_dssp HHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECS
T ss_pred HHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEee
Confidence 9999999999999996544 4555 46889999999998765
No 82
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.08 E-value=1.3e-10 Score=117.41 Aligned_cols=108 Identities=15% Similarity=0.161 Sum_probs=84.0
Q ss_pred hhccCCccccc---cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCc
Q 013877 93 IVRGGRDLFNL---LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (434)
Q Consensus 93 ~~~~~~~~f~~---~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~ 169 (434)
-+|+|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++. ....+.+.+.|+.. +
T Consensus 144 ~~~~g~W~~~~~~~~~~~l~g-ktvGIIG~G~IG~~vA~~l~~~------G~~V~~~dr~-~~~~~~~~~~g~~~----~ 211 (351)
T 3jtm_A 144 QVVKGEWNVAGIAYRAYDLEG-KTIGTVGAGRIGKLLLQRLKPF------GCNLLYHDRL-QMAPELEKETGAKF----V 211 (351)
T ss_dssp HHHTTCCCHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHGGG------CCEEEEECSS-CCCHHHHHHHCCEE----C
T ss_pred HHHcCCCccccccCCcccccC-CEEeEEEeCHHHHHHHHHHHHC------CCEEEEeCCC-ccCHHHHHhCCCeE----c
Confidence 46778886431 2357899 9999999999999999999988 9998766654 33455666678764 4
Q ss_pred CCHHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec
Q 013877 170 GDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 170 ~~~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
.+.+|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 212 ~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 256 (351)
T 3jtm_A 212 EDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNA 256 (351)
T ss_dssp SCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECS
T ss_pred CCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECc
Confidence 5899999999999999996533 4555 46788899999998664
No 83
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.08 E-value=1.4e-10 Score=116.46 Aligned_cols=105 Identities=20% Similarity=0.119 Sum_probs=80.9
Q ss_pred hhccCCcccc--ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcC
Q 013877 93 IVRGGRDLFN--LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (434)
Q Consensus 93 ~~~~~~~~f~--~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~ 170 (434)
-+|+|+|... .....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+. . .+.|+. ..
T Consensus 122 ~~~~g~w~~~~~~~~~~l~g-~tvgIiG~G~IG~~vA~~l~~~------G~~V~~~d~~~~~~--~-~~~g~~-----~~ 186 (334)
T 2pi1_A 122 RVKKLNFSQDSEILARELNR-LTLGVIGTGRIGSRVAMYGLAF------GMKVLCYDVVKRED--L-KEKGCV-----YT 186 (334)
T ss_dssp HHTTTCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCHH--H-HHTTCE-----EC
T ss_pred HHHcCCCccccCccceeccC-ceEEEECcCHHHHHHHHHHHHC------cCEEEEECCCcchh--h-HhcCce-----ec
Confidence 3577888654 12468999 9999999999999999999988 99987776654332 1 245765 35
Q ss_pred CHHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec
Q 013877 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 171 ~~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
+.+|++++||+|++++|.... ..++ ++.++.||+|++|+.++
T Consensus 187 ~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 230 (334)
T 2pi1_A 187 SLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTA 230 (334)
T ss_dssp CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECC
Confidence 699999999999999996543 3455 36788899999998665
No 84
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.08 E-value=1.9e-10 Score=116.14 Aligned_cols=107 Identities=18% Similarity=0.191 Sum_probs=80.5
Q ss_pred hhhccCCcccc----ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCC
Q 013877 92 YIVRGGRDLFN----LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG 167 (434)
Q Consensus 92 ~~~~~~~~~f~----~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~ 167 (434)
.-+|.|+|... .....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+ .+.+ .|...
T Consensus 151 ~~~r~g~W~~~~~~~~~g~~l~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~-~~~~--~g~~~--- 217 (345)
T 4g2n_A 151 RMVRSGSWPGWGPTQLLGMGLTG-RRLGIFGMGRIGRAIATRARGF------GLAIHYHNRTRLS-HALE--EGAIY--- 217 (345)
T ss_dssp HHHHTTCCCCCCTTTTCBCCCTT-CEEEEESCSHHHHHHHHHHHTT------TCEEEEECSSCCC-HHHH--TTCEE---
T ss_pred HHHHcCCCcccCcccccccccCC-CEEEEEEeChhHHHHHHHHHHC------CCEEEEECCCCcc-hhhh--cCCeE---
Confidence 34677888521 12367999 9999999999999999999987 9998776665322 2222 26653
Q ss_pred CcCCHHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec
Q 013877 168 TLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 168 ~~~~~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
+.+.+|++++||+|++++|.... ..++ ++.++.||+|++|+.++
T Consensus 218 -~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~a 263 (345)
T 4g2n_A 218 -HDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINIS 263 (345)
T ss_dssp -CSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECS
T ss_pred -eCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECC
Confidence 45899999999999999996544 4555 46788899999998664
No 85
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.08 E-value=1.1e-10 Score=116.97 Aligned_cols=107 Identities=19% Similarity=0.292 Sum_probs=82.0
Q ss_pred hhccCCcc-c--cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCc
Q 013877 93 IVRGGRDL-F--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (434)
Q Consensus 93 ~~~~~~~~-f--~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~ 169 (434)
-+|.|+|. + ......+.| +||||||+|+||.++|+.|+.. |++|+++++.. ...+.+.+.|+. .
T Consensus 125 ~~~~g~w~~~~~~~~~~~l~g-~tvGIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~-~~~~~~~~~g~~-----~ 191 (330)
T 4e5n_A 125 FVRSGKFRGWQPRFYGTGLDN-ATVGFLGMGAIGLAMADRLQGW------GATLQYHEAKA-LDTQTEQRLGLR-----Q 191 (330)
T ss_dssp HHHTTCCCSCCSCCCCCCSTT-CEEEEECCSHHHHHHHHHTTTS------CCEEEEECSSC-CCHHHHHHHTEE-----E
T ss_pred HHHhCCccccCccccCCccCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCC-CcHhHHHhcCce-----e
Confidence 45677774 1 112357899 9999999999999999999887 99987666543 234556667875 3
Q ss_pred CCHHhhhccCCEEEEeecchHH-HHHHH-HHHhcCCCCcEEEEec
Q 013877 170 GDIYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH 212 (434)
Q Consensus 170 ~~~~Ea~~~ADiViLavpd~a~-~~vl~-eI~~~Lk~g~iL~~s~ 212 (434)
.+.+|++++||+|++++|.... ..++. +.++.||+|++|+.++
T Consensus 192 ~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 236 (330)
T 4e5n_A 192 VACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPC 236 (330)
T ss_dssp CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred CCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECC
Confidence 5899999999999999996544 45554 6889999999998664
No 86
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.07 E-value=1.6e-10 Score=114.45 Aligned_cols=103 Identities=11% Similarity=0.095 Sum_probs=79.3
Q ss_pred hhccCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCH
Q 013877 93 IVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (434)
Q Consensus 93 ~~~~~~~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~ 172 (434)
-+|+|+|........+.| ++|||||+|+||.++|++|+.. |++|+++++... + .+... ..+.
T Consensus 107 ~~~~g~w~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~dr~~~---~----~~~~~----~~~l 168 (303)
T 1qp8_A 107 KMKRGDYGRDVEIPLIQG-EKVAVLGLGEIGTRVGKILAAL------GAQVRGFSRTPK---E----GPWRF----TNSL 168 (303)
T ss_dssp HHHTTCCCCCSCCCCCTT-CEEEEESCSTHHHHHHHHHHHT------TCEEEEECSSCC---C----SSSCC----BSCS
T ss_pred HHHcCCCCCCCCCCCCCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcc---c----cCccc----CCCH
Confidence 457788854322247899 9999999999999999999988 999876665432 1 13332 4578
Q ss_pred HhhhccCCEEEEeecchHH-HHHHH-HHHhcCCCCcEEEEecc
Q 013877 173 YETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSHG 213 (434)
Q Consensus 173 ~Ea~~~ADiViLavpd~a~-~~vl~-eI~~~Lk~g~iL~~s~G 213 (434)
++++++||+|++++|.... ..++. ++.+.||+|++|+.++-
T Consensus 169 ~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~sr 211 (303)
T 1qp8_A 169 EEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGR 211 (303)
T ss_dssp HHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred HHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCC
Confidence 8999999999999998754 56664 68899999999987653
No 87
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.05 E-value=1.8e-10 Score=115.24 Aligned_cols=93 Identities=22% Similarity=0.242 Sum_probs=74.9
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
..+.| ++|||||+|.||.++|+.|+.. |++|+++++...+ +.+.+.|+. ..+.++++++||+|+++
T Consensus 146 ~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~-----~~~l~~~l~~aDvVil~ 211 (334)
T 2dbq_A 146 YDVYG-KTIGIIGLGRIGQAIAKRAKGF------NMRILYYSRTRKE--EVERELNAE-----FKPLEDLLRESDFVVLA 211 (334)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHHCCE-----ECCHHHHHHHCSEEEEC
T ss_pred cCCCC-CEEEEEccCHHHHHHHHHHHhC------CCEEEEECCCcch--hhHhhcCcc-----cCCHHHHHhhCCEEEEC
Confidence 57889 9999999999999999999988 9998777665433 455566765 35788999999999999
Q ss_pred ecchHH-HHHH-HHHHhcCCCCcEEEEec
Q 013877 186 ISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 186 vpd~a~-~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
+|+... ..++ +++.+.|++|++|+.++
T Consensus 212 vp~~~~t~~~i~~~~~~~mk~~ailIn~s 240 (334)
T 2dbq_A 212 VPLTRETYHLINEERLKLMKKTAILINIA 240 (334)
T ss_dssp CCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred CCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 998774 4566 46788899999887553
No 88
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.05 E-value=1.7e-10 Score=116.39 Aligned_cols=107 Identities=20% Similarity=0.190 Sum_probs=81.2
Q ss_pred hhccCCccccc--------cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccc
Q 013877 93 IVRGGRDLFNL--------LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE 164 (434)
Q Consensus 93 ~~~~~~~~f~~--------~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~ 164 (434)
-+|+|+|.... +...+.| ++|||||+|+||.++|++|+.. |++|+++++...+ ..+.+.|+..
T Consensus 143 ~~~~g~w~~~~~~~~~~~~~~~~l~g-~tvGIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~ 213 (347)
T 1mx3_A 143 ALREGTRVQSVEQIREVASGAARIRG-ETLGIIGLGRVGQAVALRAKAF------GFNVLFYDPYLSD--GVERALGLQR 213 (347)
T ss_dssp HHHTTCCCCSHHHHHHHTTTCCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECTTSCT--THHHHHTCEE
T ss_pred HHHcCCcccccccccccccCccCCCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCcch--hhHhhcCCee
Confidence 45678884221 1247899 9999999999999999999988 9998877665433 2345567653
Q ss_pred cCCCcCCHHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec
Q 013877 165 ENGTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 165 ~~~~~~~~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
+.+.+|++++||+|++++|+... ..++ ++..+.||+|++|+.++
T Consensus 214 ----~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 259 (347)
T 1mx3_A 214 ----VSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTA 259 (347)
T ss_dssp ----CSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECS
T ss_pred ----cCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECC
Confidence 45789999999999999998644 4566 46788999999888654
No 89
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.05 E-value=1.7e-10 Score=114.46 Aligned_cols=153 Identities=20% Similarity=0.170 Sum_probs=100.8
Q ss_pred hhhccCCccc-c---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCC
Q 013877 92 YIVRGGRDLF-N---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG 167 (434)
Q Consensus 92 ~~~~~~~~~f-~---~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~ 167 (434)
.-+|+|+|.. . .....+.| ++|||||+|+||.++|++|+.. |++|+++++...+.. +.
T Consensus 122 ~~~~~g~w~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~~-------~~---- 183 (311)
T 2cuk_A 122 AYARDGLWKAWHPELLLGLDLQG-LTLGLVGMGRIGQAVAKRALAF------GMRVVYHARTPKPLP-------YP---- 183 (311)
T ss_dssp HHHHTTCCCCCCTTTTCBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSSS-------SC----
T ss_pred HHHHcCCCCccccccccCcCCCC-CEEEEEEECHHHHHHHHHHHHC------CCEEEEECCCCcccc-------cc----
Confidence 3467788842 1 12357899 9999999999999999999988 999877666543321 22
Q ss_pred CcCCHHhhhccCCEEEEeecchHH-HHHHH-HHHhcCCCCcEEEEeccchh-h--hhhccccc--C-CCCccEEEeccCC
Q 013877 168 TLGDIYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSHGFLL-G--HLQSMGLD--F-PKNIGVIAVCPKG 239 (434)
Q Consensus 168 ~~~~~~Ea~~~ADiViLavpd~a~-~~vl~-eI~~~Lk~g~iL~~s~G~~i-~--~~~~~~i~--~-~~di~VI~v~Pn~ 239 (434)
..+.+|++++||+|++++|+... ..++. +..+.||+|++|+.++--.+ . .+.+ .+. + ....||+..+|..
T Consensus 184 -~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~-aL~g~i~ga~lDv~~~eP~~ 261 (311)
T 2cuk_A 184 -FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVE-ALRGHLFGAGLDVTDPEPLP 261 (311)
T ss_dssp -BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHH-HHTTTSSEEEESSCSSSSCC
T ss_pred -cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHH-HHhCcCCEEEEeeCCCCCCC
Confidence 45788999999999999998754 56664 57788999999886643221 1 1111 011 1 1245677667743
Q ss_pred ChhhHHHHHhhcccccCCCceEEEeecCC-CCHHHHH
Q 013877 240 MGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATN 275 (434)
Q Consensus 240 pg~~vr~ly~~G~~~~G~Gv~aliav~qd-vsg~a~e 275 (434)
+.+. +|. .-+.++++|.. .|.++.+
T Consensus 262 ~~~~---L~~--------~~nviltPh~~~~t~~~~~ 287 (311)
T 2cuk_A 262 PGHP---LYA--------LPNAVITPHIGSAGRTTRE 287 (311)
T ss_dssp TTSG---GGG--------CTTEEECCSCTTCBHHHHH
T ss_pred CCCh---hhh--------CCCEEECCcCCCCCHHHHH
Confidence 2222 333 36888999974 3444433
No 90
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.03 E-value=2.8e-10 Score=116.75 Aligned_cols=160 Identities=14% Similarity=0.001 Sum_probs=104.9
Q ss_pred hhhccCCccccc---cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCC
Q 013877 92 YIVRGGRDLFNL---LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (434)
Q Consensus 92 ~~~~~~~~~f~~---~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~ 168 (434)
..+|+|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++.. ...+.+.+.|+..
T Consensus 170 ~~~~~g~W~~~~~~~~~~~l~g-ktvGIIGlG~IG~~vA~~l~a~------G~~V~~~d~~~-~~~~~~~~~G~~~---- 237 (393)
T 2nac_A 170 EWARKGGWNIADCVSHAYDLEA-MHVGTVAAGRIGLAVLRRLAPF------DVHLHYTDRHR-LPESVEKELNLTW---- 237 (393)
T ss_dssp HHHHTTCCCHHHHHTTCCCCTT-CEEEEECCSHHHHHHHHHHGGG------TCEEEEECSSC-CCHHHHHHHTCEE----
T ss_pred HHHHcCCCCccccccCCccCCC-CEEEEEeECHHHHHHHHHHHhC------CCEEEEEcCCc-cchhhHhhcCcee----
Confidence 346788995321 1257899 9999999999999999999987 99987666543 2345566678763
Q ss_pred cCCHHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec-cchh------hhhhcccccCCCCccEEEeccCC
Q 013877 169 LGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFLL------GHLQSMGLDFPKNIGVIAVCPKG 239 (434)
Q Consensus 169 ~~~~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~-G~~i------~~~~~~~i~~~~di~VI~v~Pn~ 239 (434)
..+.+|++++||+|++++|.... ..++ ++.++.||+|++|+.++ |-.+ ..+++.. ......||+.-.|..
T Consensus 238 ~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~-i~gA~lDV~~~EP~~ 316 (393)
T 2nac_A 238 HATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGR-LAGYAGDVWFPQPAP 316 (393)
T ss_dssp CSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTS-EEEEEESCCSSSSCC
T ss_pred cCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCC-eeEEEEEecCCCCCC
Confidence 35789999999999999996533 4666 46788999999888554 4211 1222211 111235666666743
Q ss_pred ChhhHHHHHhhcccccCCCceEEEeecC-CCCHHHHH
Q 013877 240 MGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATN 275 (434)
Q Consensus 240 pg~~vr~ly~~G~~~~G~Gv~aliav~q-dvsg~a~e 275 (434)
+.+. ++. --+.++++|. ..|.++.+
T Consensus 317 ~~~p---L~~--------~~nvilTPHia~~T~e~~~ 342 (393)
T 2nac_A 317 KDHP---WRT--------MPYNGMTPHISGTTLTAQA 342 (393)
T ss_dssp TTCG---GGT--------STTBCCCCSCTTCSHHHHH
T ss_pred CCCh---hHc--------CCCEEECCCCCcCcHHHHH
Confidence 3333 222 2466778886 34444443
No 91
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.03 E-value=2.9e-10 Score=115.34 Aligned_cols=109 Identities=15% Similarity=0.039 Sum_probs=83.3
Q ss_pred hhhccCCcccc---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcE-EEEEecCCchhHHHHHHcCccccCC
Q 013877 92 YIVRGGRDLFN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENG 167 (434)
Q Consensus 92 ~~~~~~~~~f~---~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~-Vivg~r~~~~s~~~A~~~G~~~~~~ 167 (434)
.-+|+|+|.+. .....+.| ++|||||+|+||.++|+.|+.. |++ |+++++.. ...+.+.+.|+..
T Consensus 143 ~~~~~g~W~~~~~~~~~~~l~g-~tvgIIG~G~IG~~vA~~l~~~------G~~~V~~~d~~~-~~~~~~~~~g~~~--- 211 (364)
T 2j6i_A 143 EQIINHDWEVAAIAKDAYDIEG-KTIATIGAGRIGYRVLERLVPF------NPKELLYYDYQA-LPKDAEEKVGARR--- 211 (364)
T ss_dssp HHHHTTCCCHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHGGG------CCSEEEEECSSC-CCHHHHHHTTEEE---
T ss_pred HHHHhCCCCcCcccCCcccCCC-CEEEEECcCHHHHHHHHHHHhC------CCcEEEEECCCc-cchhHHHhcCcEe---
Confidence 34677888542 12357899 9999999999999999999987 996 87666543 2345566778763
Q ss_pred CcCCHHhhhccCCEEEEeecchHH-HHHHH-HHHhcCCCCcEEEEec
Q 013877 168 TLGDIYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH 212 (434)
Q Consensus 168 ~~~~~~Ea~~~ADiViLavpd~a~-~~vl~-eI~~~Lk~g~iL~~s~ 212 (434)
+.+.++++++||+|++++|.... ..++. +..+.||+|++|+.++
T Consensus 212 -~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~a 257 (364)
T 2j6i_A 212 -VENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTA 257 (364)
T ss_dssp -CSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred -cCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECC
Confidence 45789999999999999998744 35563 5778999999887553
No 92
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.02 E-value=4e-10 Score=114.61 Aligned_cols=157 Identities=15% Similarity=0.165 Sum_probs=103.6
Q ss_pred hhccCCcccc----ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCC
Q 013877 93 IVRGGRDLFN----LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (434)
Q Consensus 93 ~~~~~~~~f~----~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~ 168 (434)
-+|+|+|.+. .....+.| ++|||||+|.||.++|+.++.. |++|+++++.. ..+.+.+.|+.
T Consensus 155 ~~r~g~~~w~~~~~~~~~~l~g-ktvGIIGlG~IG~~vA~~l~~f------G~~V~~~d~~~--~~~~~~~~g~~----- 220 (365)
T 4hy3_A 155 AFQEGTELWGGEGNASARLIAG-SEIGIVGFGDLGKALRRVLSGF------RARIRVFDPWL--PRSMLEENGVE----- 220 (365)
T ss_dssp HHHHTCCCCSSSSTTSCCCSSS-SEEEEECCSHHHHHHHHHHTTS------CCEEEEECSSS--CHHHHHHTTCE-----
T ss_pred HHHcCCccccccccccccccCC-CEEEEecCCcccHHHHHhhhhC------CCEEEEECCCC--CHHHHhhcCee-----
Confidence 4567774321 12367899 9999999999999999999877 99987666542 34556667876
Q ss_pred cCCHHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec-cch------hhhhhcccccCCCCccEEEeccCC
Q 013877 169 LGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKG 239 (434)
Q Consensus 169 ~~~~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~-G~~------i~~~~~~~i~~~~di~VI~v~Pn~ 239 (434)
..+.+|++++||+|++++|.... ..++ .+.++.||+|++|+.++ |-. +..+++..+. ...||..--|--
T Consensus 221 ~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~--aaLDV~~~EPl~ 298 (365)
T 4hy3_A 221 PASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV--AASDVYPEEPLP 298 (365)
T ss_dssp ECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE--EEESCCSSSSCC
T ss_pred eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce--EEeeCCCCCCCC
Confidence 45899999999999999997654 4555 46888999999998665 321 2233332222 345555555532
Q ss_pred ChhhHHHHHhhcccccCCCceEEEeecC-CCCHHHHHH
Q 013877 240 MGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (434)
Q Consensus 240 pg~~vr~ly~~G~~~~G~Gv~aliav~q-dvsg~a~e~ 276 (434)
+.+. ++. --+.++++|- ..|.++.+.
T Consensus 299 ~~~p---L~~--------~~nvilTPHia~~t~e~~~~ 325 (365)
T 4hy3_A 299 LDHP---VRS--------LKGFIRSAHRAGALDSAFKK 325 (365)
T ss_dssp TTCG---GGT--------CTTEEECCSCSSCCHHHHHH
T ss_pred CCCh---hhc--------CCCEEECCccccCHHHHHHH
Confidence 2222 222 1467788886 345555433
No 93
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.02 E-value=2.1e-10 Score=115.15 Aligned_cols=154 Identities=21% Similarity=0.228 Sum_probs=101.1
Q ss_pred hhhccCCccccc--cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCc
Q 013877 92 YIVRGGRDLFNL--LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (434)
Q Consensus 92 ~~~~~~~~~f~~--~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~ 169 (434)
.-+|.|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+. .|+.. .
T Consensus 144 ~~~~~g~w~~~~~~~~~~l~g-~~vgIIG~G~iG~~vA~~l~~~------G~~V~~~dr~~~~~------~g~~~----~ 206 (333)
T 3ba1_A 144 KYVRRGAWKFGDFKLTTKFSG-KRVGIIGLGRIGLAVAERAEAF------DCPISYFSRSKKPN------TNYTY----Y 206 (333)
T ss_dssp HHHHTTGGGGCCCCCCCCCTT-CCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCCTT------CCSEE----E
T ss_pred HHHHcCCCCccccccccccCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCCchhc------cCcee----c
Confidence 446778885421 1257899 9999999999999999999988 99987776653321 25543 4
Q ss_pred CCHHhhhccCCEEEEeecchH-HHHHH-HHHHhcCCCCcEEEEe-ccchh------hhhhcccccCCCCccEEEeccCCC
Q 013877 170 GDIYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLS-HGFLL------GHLQSMGLDFPKNIGVIAVCPKGM 240 (434)
Q Consensus 170 ~~~~Ea~~~ADiViLavpd~a-~~~vl-~eI~~~Lk~g~iL~~s-~G~~i------~~~~~~~i~~~~di~VI~v~Pn~p 240 (434)
.+.++++++||+|++++|+.. ...++ +++.+.|++|++|+.+ .|..+ ..+.+..+ -....||+..+|..+
T Consensus 207 ~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i-~ga~lDv~~~EP~~~ 285 (333)
T 3ba1_A 207 GSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRL-GGAGLDVFEREPEVP 285 (333)
T ss_dssp SCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSS-CEEEESCCTTTTCCC
T ss_pred CCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCC-eEEEEecCCCCCCCc
Confidence 678999999999999999864 45666 4577789999988755 44322 12222101 012356776667422
Q ss_pred hhhHHHHHhhcccccCCCceEEEeecCC-CCHHHHH
Q 013877 241 GPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATN 275 (434)
Q Consensus 241 g~~vr~ly~~G~~~~G~Gv~aliav~qd-vsg~a~e 275 (434)
.. ++. ..+.++++|.. .|.++.+
T Consensus 286 -~~---L~~--------~~nviltPH~~~~t~e~~~ 309 (333)
T 3ba1_A 286 -EK---LFG--------LENVVLLPHVGSGTVETRK 309 (333)
T ss_dssp -GG---GGG--------CTTEEECSSCTTCSHHHHH
T ss_pred -ch---hhc--------CCCEEECCcCCCCCHHHHH
Confidence 22 332 36778888863 3444443
No 94
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.01 E-value=2.7e-09 Score=111.59 Aligned_cols=207 Identities=12% Similarity=0.065 Sum_probs=116.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc-------------------CccccCCCcCC
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------------GFTEENGTLGD 171 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~-------------------G~~~~~~~~~~ 171 (434)
++||+|||+|.||.++|.+|.+. |.|++|++.++. .+..+...+. ++.. ..+
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~----g~g~~V~~~D~~-~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~----t~~ 79 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHK----CPHITVTVVDMN-TAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF----SSD 79 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSC-HHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE----ESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECC-HHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE----ECC
Confidence 37999999999999999999987 224687765544 3333333221 1111 346
Q ss_pred HHhhhccCCEEEEeecchH---------------HHHHHHHHHhcCCCCcEEEEeccchhh---hhhccccc-CC--CCc
Q 013877 172 IYETISGSDLVLLLISDAA---------------QADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLD-FP--KNI 230 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~a---------------~~~vl~eI~~~Lk~g~iL~~s~G~~i~---~~~~~~i~-~~--~di 230 (434)
+.+++++||+||+|+|... ..++++.|.+++++|++|++.+.+... .+...... .+ .++
T Consensus 80 ~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~ 159 (481)
T 2o3j_A 80 IPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENL 159 (481)
T ss_dssp HHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----C
T ss_pred HHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCC
Confidence 6788999999999987532 567888899999999998876554321 11110000 11 123
Q ss_pred c-EEEeccC--CChhhHHHHHhhcccccCCCceEEEeecCCC-CHHHHHHHHHHHHHhCC-Ccccccchhhhcccccccc
Q 013877 231 G-VIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDV-DGRATNVALGWSVALGS-PFTFATTLEQEYRSDIFGE 305 (434)
Q Consensus 231 ~-VI~v~Pn--~pg~~vr~ly~~G~~~~G~Gv~aliav~qdv-sg~a~e~a~~la~aiG~-~~~iettf~~E~~~Dlfge 305 (434)
+ .+..+|. .||..+..++... ..++....+. +.++.+.+..++..+|. ...+.+.. ...+.-.+-+
T Consensus 160 d~~v~~~Pe~~~~G~a~~~~~~~~--------~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~-~~ae~~Kl~~ 230 (481)
T 2o3j_A 160 KFQVLSNPEFLAEGTAMKDLANPD--------RVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNT-WSSELSKLVA 230 (481)
T ss_dssp CEEEEECCCCCCTTCHHHHHHSCS--------CEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEH-HHHHHHHHHH
T ss_pred ceEEEeCcccccccchhhcccCCC--------EEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCH-HHHHHHHHHH
Confidence 3 3567885 3444433332211 2222222211 12577888899999985 22222211 1111112222
Q ss_pred hhhhhchHHHHHHHHHHHHHHcCCCHHHHHH
Q 013877 306 RGILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (434)
Q Consensus 306 ~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~ 336 (434)
.+. ....-+++.-+...+.+.|+++++...
T Consensus 231 N~~-~a~~ia~~nE~~~la~~~Gid~~~v~~ 260 (481)
T 2o3j_A 231 NAF-LAQRISSINSISAVCEATGAEISEVAH 260 (481)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 221 122234666677778888888887765
No 95
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.00 E-value=4.7e-10 Score=111.89 Aligned_cols=107 Identities=19% Similarity=0.140 Sum_probs=81.1
Q ss_pred hhccCCccc-c---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCC
Q 013877 93 IVRGGRDLF-N---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (434)
Q Consensus 93 ~~~~~~~~f-~---~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~ 168 (434)
-+|.|+|.. . .....+.| ++|||||+|.||.++|+.|+.. |++|+++++... ..+.+.+.|+..
T Consensus 134 ~~~~~~w~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~-~~~~~~~~g~~~---- 201 (330)
T 2gcg_A 134 EVKNGGWTSWKPLWLCGYGLTQ-STVGIIGLGRIGQAIARRLKPF------GVQRFLYTGRQP-RPEEAAEFQAEF---- 201 (330)
T ss_dssp HHHTTCCCSCCTTSSCBCCCTT-CEEEEECCSHHHHHHHHHHGGG------TCCEEEEESSSC-CHHHHHTTTCEE----
T ss_pred HHHcCCCcccCcccccCcCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCc-chhHHHhcCcee----
Confidence 456788842 1 11257889 9999999999999999999988 999877776543 244455567653
Q ss_pred cCCHHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec
Q 013877 169 LGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 169 ~~~~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
.+.++++++||+|++++|+... ..++ +++.+.|++|++|+.++
T Consensus 202 -~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~s 246 (330)
T 2gcg_A 202 -VSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINIS 246 (330)
T ss_dssp -CCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECS
T ss_pred -CCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 3888999999999999998754 4555 46778899999887554
No 96
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.00 E-value=2.6e-10 Score=114.09 Aligned_cols=105 Identities=18% Similarity=0.168 Sum_probs=79.5
Q ss_pred hhccCCccc-c--ccc----cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc
Q 013877 93 IVRGGRDLF-N--LLP----DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE 165 (434)
Q Consensus 93 ~~~~~~~~f-~--~~~----~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~ 165 (434)
-+|+|+|.. . ... ..+.| ++|||||+|.||.++|+.|+.. |++|+++++...+ +.+.+.|+..
T Consensus 122 ~~~~g~w~~~~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~- 191 (333)
T 2d0i_A 122 FIRRGEWESHAKIWTGFKRIESLYG-KKVGILGMGAIGKAIARRLIPF------GVKLYYWSRHRKV--NVEKELKARY- 191 (333)
T ss_dssp HHHTTCCCCHHHHHTTSCCCCCSTT-CEEEEECCSHHHHHHHHHHGGG------TCEEEEECSSCCH--HHHHHHTEEE-
T ss_pred HHHcCCCCcCcccccCCcccCCCCc-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcch--hhhhhcCcee-
Confidence 456778842 0 111 57889 9999999999999999999988 9998776665433 4555667653
Q ss_pred CCCcCCHHhhhccCCEEEEeecch-HHHHHHH-HHHhcCCCCcEEEEec
Q 013877 166 NGTLGDIYETISGSDLVLLLISDA-AQADNYE-KIFSCMKPNSILGLSH 212 (434)
Q Consensus 166 ~~~~~~~~Ea~~~ADiViLavpd~-a~~~vl~-eI~~~Lk~g~iL~~s~ 212 (434)
.+.++++++||+|++++|.. ....++. ++.+.|++| +|+.++
T Consensus 192 ----~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~s 235 (333)
T 2d0i_A 192 ----MDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIG 235 (333)
T ss_dssp ----CCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECS
T ss_pred ----cCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECC
Confidence 47889999999999999988 4455664 567889999 887553
No 97
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.99 E-value=4.9e-10 Score=112.75 Aligned_cols=110 Identities=17% Similarity=0.109 Sum_probs=82.0
Q ss_pred hhhccCC---cccc-----ccccccCCCCEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEEEEecCCchhHHHHHHcCc
Q 013877 92 YIVRGGR---DLFN-----LLPDAFNGINQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGSRSFAEARAAGF 162 (434)
Q Consensus 92 ~~~~~~~---~~f~-----~~~~~~~g~kkIgIIG~G~mG~A~A~nLr-ds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~ 162 (434)
..+|.|+ |... .....+.| ++|||||+|.||.++|+.++ .. |++|+++++.. ...+.+.+.|+
T Consensus 137 ~~~~~g~~~~w~~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~vA~~l~~~~------G~~V~~~d~~~-~~~~~~~~~g~ 208 (348)
T 2w2k_A 137 RAARTGDPETFNRVHLEIGKSAHNPRG-HVLGAVGLGAIQKEIARKAVHGL------GMKLVYYDVAP-ADAETEKALGA 208 (348)
T ss_dssp HHHTTCCHHHHHHHHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEECSSC-CCHHHHHHHTC
T ss_pred HHHHcCCCcccccccccccccCcCCCC-CEEEEEEECHHHHHHHHHHHHhc------CCEEEEECCCC-cchhhHhhcCc
Confidence 3467777 8311 12257899 99999999999999999999 77 99987666543 33444555677
Q ss_pred cccCCCcCCHHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEecc
Q 013877 163 TEENGTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 163 ~~~~~~~~~~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~G 213 (434)
.. +.+.++++++||+|++++|+... ..++ .++.+.|++|++|+.++.
T Consensus 209 ~~----~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~sr 257 (348)
T 2w2k_A 209 ER----VDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTAR 257 (348)
T ss_dssp EE----CSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred EE----eCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence 63 34788999999999999998754 4555 367788999998876543
No 98
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.99 E-value=1.3e-10 Score=115.79 Aligned_cols=105 Identities=10% Similarity=0.068 Sum_probs=79.3
Q ss_pred hhccCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCH
Q 013877 93 IVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (434)
Q Consensus 93 ~~~~~~~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~ 172 (434)
-+|+|+|..... ..+.| ++|||||+|+||.++|+.|+.. |++|+++++...+. .++.. .....+.
T Consensus 123 ~~~~g~W~~~~~-~~l~g-~tvGIiG~G~IG~~vA~~l~~~------G~~V~~~dr~~~~~------~~~~~-~~~~~~l 187 (315)
T 3pp8_A 123 LKNQALWKPLPE-YTREE-FSVGIMGAGVLGAKVAESLQAW------GFPLRCWSRSRKSW------PGVES-YVGREEL 187 (315)
T ss_dssp HHHTTCCCCCCC-CCSTT-CCEEEECCSHHHHHHHHHHHTT------TCCEEEEESSCCCC------TTCEE-EESHHHH
T ss_pred HHHhcccCCCCC-CCcCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEEcCCchhh------hhhhh-hcccCCH
Confidence 457788966543 78899 9999999999999999999988 99988777653321 22321 0002468
Q ss_pred HhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec
Q 013877 173 YETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 173 ~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
+|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 188 ~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 229 (315)
T 3pp8_A 188 RAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLA 229 (315)
T ss_dssp HHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECS
T ss_pred HHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECC
Confidence 8999999999999996544 4666 46889999999988664
No 99
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.99 E-value=1.5e-10 Score=115.81 Aligned_cols=149 Identities=11% Similarity=0.094 Sum_probs=98.2
Q ss_pred hhccCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCH
Q 013877 93 IVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (434)
Q Consensus 93 ~~~~~~~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~ 172 (434)
-+|+|+|........+.| ++|||||+|+||.++|+.|+.. |++|+++++...+. +.+ ..... ..+.
T Consensus 120 ~~~~~~W~~~~~~~~l~g-ktvGIiGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~~~-~~~~~-----~~~l 185 (324)
T 3evt_A 120 QRGARQWALPMTTSTLTG-QQLLIYGTGQIGQSLAAKASAL------GMHVIGVNTTGHPA-DHF-HETVA-----FTAT 185 (324)
T ss_dssp HTTTCCSSCSSCCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCCCC-TTC-SEEEE-----GGGC
T ss_pred HHhcCCcccCCCCccccC-CeEEEECcCHHHHHHHHHHHhC------CCEEEEECCCcchh-HhH-hhccc-----cCCH
Confidence 467788966543478999 9999999999999999999988 99988777653321 111 11111 3467
Q ss_pred HhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec-cch------hhhhhcccccCCCCccEEEeccCCChhh
Q 013877 173 YETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (434)
Q Consensus 173 ~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~-G~~------i~~~~~~~i~~~~di~VI~v~Pn~pg~~ 243 (434)
+|++++||+|++++|.... ..++ .+.+..||+|++|+.++ |-. +..+++.. ......||..--|.-+.+.
T Consensus 186 ~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~-i~gA~lDV~~~EPl~~~~p 264 (324)
T 3evt_A 186 ADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQ-LSMAALDVTEPEPLPTDHP 264 (324)
T ss_dssp HHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTS-CSEEEESSCSSSSCCTTCG
T ss_pred HHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCC-ceEEEeCCCCCCCCCCCCh
Confidence 8999999999999996544 4555 46788999999998665 321 12222211 1123456666666433322
Q ss_pred HHHHHhhcccccCCCceEEEeecC
Q 013877 244 VRRLYVQGKEINGAGINSSFAVHQ 267 (434)
Q Consensus 244 vr~ly~~G~~~~G~Gv~aliav~q 267 (434)
++.. -+.++++|-
T Consensus 265 ---L~~~--------~nvilTPHi 277 (324)
T 3evt_A 265 ---LWQR--------DDVLITPHI 277 (324)
T ss_dssp ---GGGC--------SSEEECCSC
T ss_pred ---hhcC--------CCEEEcCcc
Confidence 2222 467788886
No 100
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.99 E-value=4.3e-09 Score=109.53 Aligned_cols=199 Identities=13% Similarity=0.114 Sum_probs=120.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc-------------------C-ccccCCCcCC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------------G-FTEENGTLGD 171 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~-------------------G-~~~~~~~~~~ 171 (434)
-+|+|||+|.||.++|.+|.+. |++|+++++..++ .+...+. | +.. +.+
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~------G~~V~~~D~~~~k-v~~l~~g~~~~~epgl~~~~~~~~~~g~l~~----ttd 77 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF------GHEVVCVDKDARK-IELLHQNVMPIYEPGLDALVASNVKAGRLSF----TTD 77 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCSTT-HHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE----ESC
T ss_pred eEEEEEcCCHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHhcCCCCccCCCHHHHHHhhcccCCEEE----ECC
Confidence 6899999999999999999999 9999877665443 3333221 1 222 467
Q ss_pred HHhhhccCCEEEEeecch-----------HHHHHHHHHHhcCCCCcEEEEeccchhh-------hhhcccccCCCCccEE
Q 013877 172 IYETISGSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFPKNIGVI 233 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~-----------a~~~vl~eI~~~Lk~g~iL~~s~G~~i~-------~~~~~~i~~~~di~VI 233 (434)
+.+++++||+||+|||.. ...++++.|.++|++|++|++.+++... .+.+. ....++. +
T Consensus 78 ~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~--~~~~d~~-v 154 (446)
T 4a7p_A 78 LAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV--APNSGAK-V 154 (446)
T ss_dssp HHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH--STTSCCE-E
T ss_pred HHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh--CCCCCce-E
Confidence 889999999999997744 3678888999999999999888765422 11111 1112333 4
Q ss_pred EeccCCC--hhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCc--ccccchhhhcccccccchhhh
Q 013877 234 AVCPKGM--GPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPF--TFATTLEQEYRSDIFGERGIL 309 (434)
Q Consensus 234 ~v~Pn~p--g~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~--~iettf~~E~~~Dlfge~tvL 309 (434)
...|... |..+++.. . .+. +.+..+ +.++.+.+..++..++... ++..+-....+.-.+.+.+.+
T Consensus 155 ~~~Pe~a~eG~a~~d~~-~--------p~~-ivvG~~-~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~ 223 (446)
T 4a7p_A 155 VSNPEFLREGAAIEDFK-R--------PDR-VVVGTE-DEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFL 223 (446)
T ss_dssp EECCCCCCTTSHHHHHH-S--------CSC-EEEECS-CHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHH
T ss_pred EeCcccccccchhhhcc-C--------CCE-EEEeCC-cHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHH
Confidence 5667532 22211111 1 223 222321 4678888889998877531 111111112222223333322
Q ss_pred hchHHHHHHHHHHHHHHcCCCHHHHHH
Q 013877 310 LGAVHGIVESLFRRFTENGMNEDLAYK 336 (434)
Q Consensus 310 ~G~~~aliea~~~~~v~~Gl~~e~A~~ 336 (434)
..--+++.-+...+.+.|+++++.+.
T Consensus 224 -a~~ia~~nE~~~l~~~~GiD~~~v~~ 249 (446)
T 4a7p_A 224 -AVKITFINEIADLCEQVGADVQEVSR 249 (446)
T ss_dssp -HHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 22334666677888899999987766
No 101
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.98 E-value=1.1e-10 Score=116.77 Aligned_cols=149 Identities=17% Similarity=0.140 Sum_probs=97.7
Q ss_pred hhccCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCH
Q 013877 93 IVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (434)
Q Consensus 93 ~~~~~~~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~ 172 (434)
-+|+|+|..... ..+.| ++|||||+|+||.++|+.|+.. |++|+++++..... ..+ .+... ..+.
T Consensus 124 ~~~~g~W~~~~~-~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~~~--~~~~~----~~~l 188 (324)
T 3hg7_A 124 QQKQRLWQSHPY-QGLKG-RTLLILGTGSIGQHIAHTGKHF------GMKVLGVSRSGRER-AGF--DQVYQ----LPAL 188 (324)
T ss_dssp HHHTTCCCCCCC-CCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCC-TTC--SEEEC----GGGH
T ss_pred HHhhCCCcCCCC-ccccc-ceEEEEEECHHHHHHHHHHHhC------CCEEEEEcCChHHh-hhh--hcccc----cCCH
Confidence 357789975544 68999 9999999999999999999988 99987776653221 111 11111 4578
Q ss_pred HhhhccCCEEEEeecchHH-HHHHH-HHHhcCCCCcEEEEec-cch------hhhhhcccccCCCCccEEEeccCCChhh
Q 013877 173 YETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (434)
Q Consensus 173 ~Ea~~~ADiViLavpd~a~-~~vl~-eI~~~Lk~g~iL~~s~-G~~------i~~~~~~~i~~~~di~VI~v~Pn~pg~~ 243 (434)
+|++++||+|++++|.... ..++. +.+..||+|++|+.++ |-. +..+++.. .....+||.-.-|.-+.+.
T Consensus 189 ~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~-i~ga~lDV~~~EPl~~~~p 267 (324)
T 3hg7_A 189 NKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGK-LGMAVLDVFEQEPLPADSP 267 (324)
T ss_dssp HHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTS-SSEEEESCCSSSSCCTTCT
T ss_pred HHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCC-ceEEEeccCCCCCCCCCCh
Confidence 9999999999999996544 44554 5778899999998664 321 12222211 1123456666666433322
Q ss_pred HHHHHhhcccccCCCceEEEeecCC
Q 013877 244 VRRLYVQGKEINGAGINSSFAVHQD 268 (434)
Q Consensus 244 vr~ly~~G~~~~G~Gv~aliav~qd 268 (434)
++. --+.++++|--
T Consensus 268 ---L~~--------~~nvilTPHia 281 (324)
T 3hg7_A 268 ---LWG--------QPNLIITPHNS 281 (324)
T ss_dssp ---TTT--------CTTEEECCSCS
T ss_pred ---hhc--------CCCEEEeCCCc
Confidence 121 14677888863
No 102
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.96 E-value=2.7e-09 Score=105.75 Aligned_cols=94 Identities=17% Similarity=0.235 Sum_probs=74.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCC---------CcCCHHhhhccCCEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG---------TLGDIYETISGSDLV 182 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~---------~~~~~~Ea~~~ADiV 182 (434)
+||+|||+|+||.++|..|.++ |++|.+..|. +..+...+.|+..... ...+.++ ++.+|+|
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~------g~~V~~~~r~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~V 74 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA------GEAINVLARG--ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVV 74 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT------TCCEEEECCH--HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCEEEEEECh--HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEE
Confidence 7999999999999999999999 9998877763 3456666677653100 0235555 5899999
Q ss_pred EEeecchHHHHHHHHHHhcCCCCcEE-EEeccc
Q 013877 183 LLLISDAAQADNYEKIFSCMKPNSIL-GLSHGF 214 (434)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~g~iL-~~s~G~ 214 (434)
|++||+....+++++|.++++++++| ++..|+
T Consensus 75 ilavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 75 IVAVKAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp EECCCHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred EEeCCchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 99999998899999999999999865 467885
No 103
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.96 E-value=1.3e-08 Score=105.65 Aligned_cols=196 Identities=11% Similarity=0.069 Sum_probs=112.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc------------------CccccCCCcCCHH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA------------------GFTEENGTLGDIY 173 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~------------------G~~~~~~~~~~~~ 173 (434)
+||+|||+|.||.++|..|. . |++|+++++. +...+...+. ++.. +.+++
T Consensus 37 mkIaVIGlG~mG~~lA~~La-~------G~~V~~~D~~-~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~----ttd~~ 104 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIA-Q------NHEVVALDIV-QAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA----TTDKH 104 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSC-HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE----ESCHH
T ss_pred CEEEEECcCHHHHHHHHHHH-c------CCeEEEEecC-HHHhhHHhccCCccccccHHHHHhhccCCeEE----EcCHH
Confidence 79999999999999999886 4 7888766554 3333333321 2332 46788
Q ss_pred hhhccCCEEEEeecch-----------HHHHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCCCCccEEEeccCC--C
Q 013877 174 ETISGSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKG--M 240 (434)
Q Consensus 174 Ea~~~ADiViLavpd~-----------a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~--p 240 (434)
+++++||+||+++|.. .+.++++.|.+ +++|++|++.+.+.....++....+... .+..+|.. |
T Consensus 105 ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~--~v~~sPe~~~~ 181 (432)
T 3pid_A 105 DAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID--NVIFSPEFLRE 181 (432)
T ss_dssp HHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC--CEEECCCCCCT
T ss_pred HHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc--cEeecCccCCc
Confidence 9999999999999976 45678888999 9999999887766433221101122221 33457743 3
Q ss_pred hhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHH--hCCC-cccccchhhhcccccccchhhhhchHHHHH
Q 013877 241 GPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVA--LGSP-FTFATTLEQEYRSDIFGERGILLGAVHGIV 317 (434)
Q Consensus 241 g~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~a--iG~~-~~iettf~~E~~~Dlfge~tvL~G~~~ali 317 (434)
+..+..... .+. |.+..+ .+..+.+..++.. ++.. .++.+.. .+-+.-.+-+.+.+ ..--+++
T Consensus 182 G~A~~~~l~---------p~r-IvvG~~--~~~~~~~~~ll~~~~~~~~~~v~~~~~-~~AE~~Kl~~N~~~-a~~Ia~~ 247 (432)
T 3pid_A 182 GRALYDNLH---------PSR-IVIGER--SARAERFADLLKEGAIKQDIPTLFTDS-TEAEAIKLFANTYL-ALRVAYF 247 (432)
T ss_dssp TSHHHHHHS---------CSC-EEESSC--SHHHHHHHHHHHHHCSSSSCCEEECCH-HHHHHHHHHHHHHH-HHHHHHH
T ss_pred chhhhcccC---------Cce-EEecCC--HHHHHHHHHHHHhhhccCCCeEEecCc-cHHHHHHHHHHHHH-HHHHHHH
Confidence 333221111 112 223332 3455666677665 4432 1222221 11111122233222 2233455
Q ss_pred HHHHHHHHHcCCCHHHHHH
Q 013877 318 ESLFRRFTENGMNEDLAYK 336 (434)
Q Consensus 318 ea~~~~~v~~Gl~~e~A~~ 336 (434)
.-+...+.+.|+++++.+.
T Consensus 248 nEl~~lae~~GiD~~~v~~ 266 (432)
T 3pid_A 248 NELDSYAESQGLNSKQIIE 266 (432)
T ss_dssp HHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHH
Confidence 6667777888888877665
No 104
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.96 E-value=5e-09 Score=108.89 Aligned_cols=204 Identities=13% Similarity=0.090 Sum_probs=115.7
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHH---------------H----cCccccCCCcCC
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR---------------A----AGFTEENGTLGD 171 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~---------------~----~G~~~~~~~~~~ 171 (434)
|+||+|||+|.||.++|.+|.+. |.|++|+++++..+ ..+... + .++.. ..+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~----g~G~~V~~~d~~~~-~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~----t~~ 75 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHM----CPEIRVTVVDVNES-RINAWNSPTLPIYEPGLKEVVESCRGKNLFF----STN 75 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSCHH-HHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE----ESC
T ss_pred ccEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECCHH-HHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE----ECC
Confidence 47999999999999999999876 22478876655433 222211 1 23332 357
Q ss_pred HHhhhccCCEEEEeecchH---------------HHHHHHHHHhcCCCCcEEEEeccchhh-------hhhcccccCCCC
Q 013877 172 IYETISGSDLVLLLISDAA---------------QADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFPKN 229 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~a---------------~~~vl~eI~~~Lk~g~iL~~s~G~~i~-------~~~~~~i~~~~d 229 (434)
+++++++||+||+|+|... ..++.++|.+++++|++|++.+.+... .+++ .....
T Consensus 76 ~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~---~~~~~ 152 (467)
T 2q3e_A 76 IDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDA---NTKPN 152 (467)
T ss_dssp HHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHH---TCCTT
T ss_pred HHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHH---hCCCC
Confidence 7889999999999998544 346777899999999988876543321 1211 10112
Q ss_pred cc-EEEeccCC--ChhhHHHHHhhcccccCCCceEEEeecC-CCCHHHHHHHHHHHHHh-CCCcccccchhhhccccccc
Q 013877 230 IG-VIAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVALGWSVAL-GSPFTFATTLEQEYRSDIFG 304 (434)
Q Consensus 230 i~-VI~v~Pn~--pg~~vr~ly~~G~~~~G~Gv~aliav~q-dvsg~a~e~a~~la~ai-G~~~~iettf~~E~~~Dlfg 304 (434)
++ .|...|.. ++..+.+++... ..++.-.+ ..+.+..+.+..++..+ |...++.+.. ...+.-.+.
T Consensus 153 ~d~~V~~~Pe~~~~G~~~~d~~~~~--------rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~-~~ae~~Kl~ 223 (467)
T 2q3e_A 153 LNLQVLSNPEFLAEGTAIKDLKNPD--------RVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNT-WSSELSKLA 223 (467)
T ss_dssp CEEEEEECCCCCCTTSHHHHHHSCS--------CEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECH-HHHHHHHHH
T ss_pred CCeEEEeCHHHhhcccchhhccCCC--------EEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCH-HHHHHHHHH
Confidence 33 34466643 444433333221 12222111 13567889999999988 5332222211 111111122
Q ss_pred chhhhhchHHHHHHHHHHHHHHcCCCHHHHHH
Q 013877 305 ERGILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (434)
Q Consensus 305 e~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~ 336 (434)
+.+.+ ...-+++.-+...+.+.|+++++...
T Consensus 224 ~N~~~-a~~ia~~nE~~~l~~~~Gid~~~v~~ 254 (467)
T 2q3e_A 224 ANAFL-AQRISSINSISALCEATGADVEEVAT 254 (467)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 22211 22234555566777888888876654
No 105
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.96 E-value=4.3e-09 Score=103.80 Aligned_cols=101 Identities=18% Similarity=0.265 Sum_probs=75.1
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCC---------CcCCHHhhh
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG---------TLGDIYETI 176 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~---------~~~~~~Ea~ 176 (434)
.++.. +||+|||.|+||.++|..|.++ |++|.++ ++ ++..+...+.|...... ...+. +.+
T Consensus 15 ~~~~~-~kI~IiGaGa~G~~~a~~L~~~------G~~V~l~-~~-~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~ 84 (318)
T 3hwr_A 15 LYFQG-MKVAIMGAGAVGCYYGGMLARA------GHEVILI-AR-PQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAV 84 (318)
T ss_dssp ------CEEEEESCSHHHHHHHHHHHHT------TCEEEEE-CC-HHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGG
T ss_pred hhccC-CcEEEECcCHHHHHHHHHHHHC------CCeEEEE-Ec-HhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHc
Confidence 45555 8999999999999999999999 9998877 54 44455555666542100 02344 346
Q ss_pred ccCCEEEEeecchHHHHHHHHHHhcCCCCcEE-EEeccchh
Q 013877 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFLL 216 (434)
Q Consensus 177 ~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL-~~s~G~~i 216 (434)
+.+|+||++||+....+++++|.++++++++| +...|+..
T Consensus 85 ~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 85 QGADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred CCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 89999999999999999999999999999865 57889875
No 106
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.94 E-value=3.2e-09 Score=104.44 Aligned_cols=96 Identities=20% Similarity=0.204 Sum_probs=74.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc-CccccC----------CCcCCHHhhhccCC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEEN----------GTLGDIYETISGSD 180 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~~----------~~~~~~~Ea~~~AD 180 (434)
+||+|||+|.||..+|..|.+. |++|.+.+|..+ ..+...+. |+...+ ....+.+++++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~------g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 77 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK------GQSVLAWDIDAQ-RIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDAD 77 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCS
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCHH-HHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCC
Confidence 6899999999999999999998 999877666533 34444443 331100 01357888899999
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEeccc
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~ 214 (434)
+||+++|+..+.++++++.++++++++|+...|.
T Consensus 78 ~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~~ 111 (359)
T 1bg6_A 78 VILIVVPAIHHASIAANIASYISEGQLIILNPGA 111 (359)
T ss_dssp EEEECSCGGGHHHHHHHHGGGCCTTCEEEESSCC
T ss_pred EEEEeCCchHHHHHHHHHHHhCCCCCEEEEcCCC
Confidence 9999999999999999999999999988777773
No 107
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.93 E-value=1.5e-09 Score=108.59 Aligned_cols=105 Identities=12% Similarity=0.067 Sum_probs=77.5
Q ss_pred hhccCCccccc-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC
Q 013877 93 IVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (434)
Q Consensus 93 ~~~~~~~~f~~-~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~ 171 (434)
-+|+|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+. +.+ ++.. ..+
T Consensus 128 ~~~~g~w~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~~~-~~~~----~~~ 192 (333)
T 1j4a_A 128 KVARHDLRWAPTIGREVRD-QVVGVVGTGHIGQVFMQIMEGF------GAKVITYDIFRNPE---LEK-KGYY----VDS 192 (333)
T ss_dssp HHHTTBCCCTTCCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCHH---HHH-TTCB----CSC
T ss_pred HHHcCCCccCCcccccCCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcchh---HHh-hCee----cCC
Confidence 45677774321 2357899 9999999999999999999988 99987776654332 222 3331 337
Q ss_pred HHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec
Q 013877 172 IYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
.+|++++||+|++++|.... ..++ ++..+.||+|++|+.++
T Consensus 193 l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~a 235 (333)
T 1j4a_A 193 LDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVS 235 (333)
T ss_dssp HHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECS
T ss_pred HHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECC
Confidence 89999999999999997654 4555 35778899999887553
No 108
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.92 E-value=1.4e-08 Score=106.21 Aligned_cols=204 Identities=14% Similarity=0.106 Sum_probs=117.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccc-c-C--------------CCcCCHH
Q 013877 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-E-N--------------GTLGDIY 173 (434)
Q Consensus 110 g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~-~-~--------------~~~~~~~ 173 (434)
|-+||+|||+|.||.++|..|.+. |++|+++++. ++..+...+.+... + + ....+.+
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~------G~~V~~~d~~-~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~ 79 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI------GHDVFCLDVD-QAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIE 79 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHH
Confidence 348999999999999999999999 9998766554 43344444322100 0 0 0134677
Q ss_pred hhhccCCEEEEeecc----------hHHHHHHHHHHhcCCCCcEEEEeccchhh-------hhhcccccCC---CCccEE
Q 013877 174 ETISGSDLVLLLISD----------AAQADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFP---KNIGVI 233 (434)
Q Consensus 174 Ea~~~ADiViLavpd----------~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~-------~~~~~~i~~~---~di~VI 233 (434)
+++++||+||+|||. ....+++++|.++++++++|+..+++... .+.+. +..+ .++. +
T Consensus 80 ~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~-~~~g~~~~~~~-v 157 (478)
T 2y0c_A 80 AAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEE-LAKRGGDQMFS-V 157 (478)
T ss_dssp HHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHH-HHHTTCCCCEE-E
T ss_pred HHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHH-hcCCCCCccEE-E
Confidence 889999999999997 77788999999999999998877775331 11110 0001 2222 4
Q ss_pred EeccCC--ChhhHHHHHhhcccccCCCceEEEeecCCCCH----HHHHHHHHHHHHhCC--Ccccccchhhhcccccccc
Q 013877 234 AVCPKG--MGPSVRRLYVQGKEINGAGINSSFAVHQDVDG----RATNVALGWSVALGS--PFTFATTLEQEYRSDIFGE 305 (434)
Q Consensus 234 ~v~Pn~--pg~~vr~ly~~G~~~~G~Gv~aliav~qdvsg----~a~e~a~~la~aiG~--~~~iettf~~E~~~Dlfge 305 (434)
...|.. ||..+.+... .+.++ +..+ ++ +..+.+..++..++. ...+.+.. ...+.-.+.+
T Consensus 158 ~~~Pe~~~eG~~~~~~~~---------p~~iv-iG~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di-~~ae~~Kl~~ 225 (478)
T 2y0c_A 158 VSNPEFLKEGAAVDDFTR---------PDRIV-IGCD-DDVPGERARELMKKLYAPFNRNHERTLYMDV-RSAEFTKYAA 225 (478)
T ss_dssp EECCCCCCTTCHHHHHHS---------CSCEE-EECC-SSHHHHHHHHHHHHHTGGGGSSSCCEEEECH-HHHHHHHHHH
T ss_pred EEChhhhcccceeeccCC---------CCEEE-EEEC-CCcccHHHHHHHHHHHHHHhccCCeEEcCCH-HHHHHHHHHH
Confidence 556643 2332221111 22212 2332 23 677888888887653 11111111 1111112222
Q ss_pred hhhhhchHHHHHHHHHHHHHHcCCCHHHHH
Q 013877 306 RGILLGAVHGIVESLFRRFTENGMNEDLAY 335 (434)
Q Consensus 306 ~tvL~G~~~aliea~~~~~v~~Gl~~e~A~ 335 (434)
.+.+ ...-+++.-+...+.+.|+++++..
T Consensus 226 N~~~-a~~ia~~nE~~~la~~~Gid~~~v~ 254 (478)
T 2y0c_A 226 NAML-ATRISFMNELANLADRFGADIEAVR 254 (478)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHH-HHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 2211 1222366667778888899887655
No 109
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.91 E-value=1.1e-09 Score=112.73 Aligned_cols=157 Identities=20% Similarity=0.162 Sum_probs=95.2
Q ss_pred hhccCCccccc-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcC-ccccCCCcC
Q 013877 93 IVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLG 170 (434)
Q Consensus 93 ~~~~~~~~f~~-~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G-~~~~~~~~~ 170 (434)
-+|+|+|.... ....+.| |+|||||+|+||..+|+.++.. |++|+++++..... .| +.. +.
T Consensus 127 ~~~~g~W~~~~~~~~el~g-ktlGiIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~~------~~~~~~----~~ 189 (404)
T 1sc6_A 127 KAHRGVGNKLAAGSFEARG-KKLGIIGYGHIGTQLGILAESL------GMYVYFYDIENKLP------LGNATQ----VQ 189 (404)
T ss_dssp HHHHTCCC-----CCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCC------CTTCEE----CS
T ss_pred HHHcCCccccCCCccccCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEEcCCchhc------cCCcee----cC
Confidence 46778885432 2367999 9999999999999999999988 99987766643221 22 332 45
Q ss_pred CHHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec-cch------hhhhhcccccCCCCccEEEeccCCCh
Q 013877 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMG 241 (434)
Q Consensus 171 ~~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~-G~~------i~~~~~~~i~~~~di~VI~v~Pn~pg 241 (434)
+.+|++++||+|++++|.... ..++ ++.++.||+|++|+.++ |-. ...+++..+ -...+||+...|..+.
T Consensus 190 ~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i-~gA~lDVf~~EP~~~~ 268 (404)
T 1sc6_A 190 HLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHL-AGAAIDVFPTEPATNS 268 (404)
T ss_dssp CHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSE-EEEEEEC---------
T ss_pred CHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCc-cEEEEeecCCCCCCcc
Confidence 899999999999999998754 4566 45778899999988664 321 112222111 1124577777774322
Q ss_pred hhH-HHHHhhcccccCCCceEEEeecCC-CCHHHHH
Q 013877 242 PSV-RRLYVQGKEINGAGINSSFAVHQD-VDGRATN 275 (434)
Q Consensus 242 ~~v-r~ly~~G~~~~G~Gv~aliav~qd-vsg~a~e 275 (434)
... ..++. --+.++++|-. .|.++.+
T Consensus 269 ~~~~~pL~~--------~~nvilTPHi~~~T~ea~~ 296 (404)
T 1sc6_A 269 DPFTSPLAE--------FDNVLLTPHIGGSTQEAQE 296 (404)
T ss_dssp CTTTGGGTT--------CTTEEEECCCSCCSHHHHH
T ss_pred ccccchhhc--------CCCEEECCCCCCCcHHHHH
Confidence 100 01221 24788899874 3444443
No 110
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.91 E-value=2.9e-09 Score=104.79 Aligned_cols=101 Identities=23% Similarity=0.245 Sum_probs=77.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccC---C--------CcCCHHhhhccCC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---G--------TLGDIYETISGSD 180 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~---~--------~~~~~~Ea~~~AD 180 (434)
+||+|||+|+||.++|..|.++ |++|.+..|.. .+..++.|+...+ + .+.+.+++.+.+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~---~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT------GHCVSVVSRSD---YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT------TCEEEEECSTT---HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCh---HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCC
Confidence 7999999999999999999999 99998877753 2555556653211 1 1245666666899
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEE-EEeccch-hhhhhc
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFL-LGHLQS 221 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL-~~s~G~~-i~~~~~ 221 (434)
+||++||..+..++++++.|+++++++| ++..|+. ...+.+
T Consensus 74 lVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~ 116 (320)
T 3i83_A 74 CTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAA 116 (320)
T ss_dssp EEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHH
T ss_pred EEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHH
Confidence 9999999999999999999999988854 5788986 344443
No 111
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.90 E-value=1.2e-09 Score=110.23 Aligned_cols=101 Identities=20% Similarity=0.127 Sum_probs=75.6
Q ss_pred cCCccc--cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHH
Q 013877 96 GGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY 173 (434)
Q Consensus 96 ~~~~~f--~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~ 173 (434)
+|+|.+ ......+.| ++|||||+|.||.++|+.|+.. |++|+++++...+ ..+.+.. ..+.+
T Consensus 132 ~g~~~w~~~~~~~~l~g-ktvgIiGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~----~~~~~~~-----~~~l~ 195 (343)
T 2yq5_A 132 DHDFTWPSNLISNEIYN-LTVGLIGVGHIGSAVAEIFSAM------GAKVIAYDVAYNP----EFEPFLT-----YTDFD 195 (343)
T ss_dssp HCCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCG----GGTTTCE-----ECCHH
T ss_pred cCCcccccCCCccccCC-CeEEEEecCHHHHHHHHHHhhC------CCEEEEECCChhh----hhhcccc-----ccCHH
Confidence 565433 223467899 9999999999999999999988 9998777665432 1122333 35899
Q ss_pred hhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec
Q 013877 174 ETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 174 Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 196 ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 236 (343)
T 2yq5_A 196 TVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCA 236 (343)
T ss_dssp HHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred HHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECC
Confidence 999999999999996544 3455 35778899999998665
No 112
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.90 E-value=3.7e-08 Score=98.45 Aligned_cols=152 Identities=13% Similarity=0.155 Sum_probs=113.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHH-----------HHHcCccccC----------CCcC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-----------ARAAGFTEEN----------GTLG 170 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~-----------A~~~G~~~~~----------~~~~ 170 (434)
.||+|||.|.||..+|..+..+ |++|++.+.. ++..+. ..+.|..... ..+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~------G~~V~l~D~~-~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~ 79 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIE-PRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCT 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSC-HHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEEC
T ss_pred CeEEEECCcHHHHHHHHHHHhC------CCeEEEEECC-HHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccccc
Confidence 7899999999999999999999 9999877654 222222 2223322100 0145
Q ss_pred CHHhhhccCCEEEEeecchHHH--HHHHHHHhcCCCCcEEE-EeccchhhhhhcccccCCCCccEEEeccCCChhhHHHH
Q 013877 171 DIYETISGSDLVLLLISDAAQA--DNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (434)
Q Consensus 171 ~~~Ea~~~ADiViLavpd~a~~--~vl~eI~~~Lk~g~iL~-~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~l 247 (434)
+++|++++||+|+=++|-.... +++.+|-++++++++|. -++++.+..+.+ .....-+|+..||=-|.+.++
T Consensus 80 ~l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~---~~~~p~r~ig~HffNP~~~m~-- 154 (319)
T 3ado_A 80 NLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT---GLAHVKQCIVAHPVNPPYYIP-- 154 (319)
T ss_dssp CHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT---TCTTGGGEEEEEECSSTTTCC--
T ss_pred chHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhh---hccCCCcEEEecCCCCccccc--
Confidence 7889999999999999965553 79999999999999884 778888877755 223334899999988888731
Q ss_pred HhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 013877 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (434)
Q Consensus 248 y~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~ 287 (434)
.-- +..+...+.+.++.+.+++..+|..
T Consensus 155 -----------LVE-iv~g~~Ts~~~~~~~~~~~~~~gk~ 182 (319)
T 3ado_A 155 -----------LVE-LVPHPETSPATVDRTHALMRKIGQS 182 (319)
T ss_dssp -----------EEE-EEECTTCCHHHHHHHHHHHHHTTCE
T ss_pred -----------hHH-hcCCCCCcHHHHHHHHHHHHHhCCc
Confidence 222 3457788889999999999999964
No 113
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.87 E-value=2.4e-09 Score=110.59 Aligned_cols=104 Identities=15% Similarity=0.162 Sum_probs=76.9
Q ss_pred hhccCCccccc-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC
Q 013877 93 IVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (434)
Q Consensus 93 ~~~~~~~~f~~-~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~ 171 (434)
-+|+|+|.... ....+.| ++|||||+|+||.++|+.++.. |++|+++++..... ..+... ..+
T Consensus 138 ~~~~g~W~~~~~~~~el~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~yd~~~~~~-----~~~~~~----~~s 201 (416)
T 3k5p_A 138 SAHAGGWEKTAIGSREVRG-KTLGIVGYGNIGSQVGNLAESL------GMTVRYYDTSDKLQ-----YGNVKP----AAS 201 (416)
T ss_dssp HHHTTCCCCCCTTCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCCCC-----BTTBEE----CSS
T ss_pred hhhcccccccCCCCccCCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCcchhc-----ccCcEe----cCC
Confidence 36778896543 2468999 9999999999999999999988 99987666542211 112322 568
Q ss_pred HHhhhccCCEEEEeecchHHH-HHH-HHHHhcCCCCcEEEEec
Q 013877 172 IYETISGSDLVLLLISDAAQA-DNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~a~~-~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
.+|++++||+|++++|..... .++ ++.+..||+|++|+.++
T Consensus 202 l~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~a 244 (416)
T 3k5p_A 202 LDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNA 244 (416)
T ss_dssp HHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECS
T ss_pred HHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECC
Confidence 999999999999999986654 455 36788899999998664
No 114
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.87 E-value=1.9e-09 Score=107.73 Aligned_cols=105 Identities=15% Similarity=0.087 Sum_probs=78.2
Q ss_pred hhhccCCccc--cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCc
Q 013877 92 YIVRGGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (434)
Q Consensus 92 ~~~~~~~~~f--~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~ 169 (434)
.-+|+|+|.. ......+.| ++|||||+|.||.++|+.|+.. |++|+++++...+. + +.++. .
T Consensus 126 ~~~~~g~w~~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~-~~~~~-----~ 189 (331)
T 1xdw_A 126 SRTAKKNFKVDAFMFSKEVRN-CTVGVVGLGRIGRVAAQIFHGM------GATVIGEDVFEIKG---I-EDYCT-----Q 189 (331)
T ss_dssp HHHTTTCCCCCSTTCCCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCS---C-TTTCE-----E
T ss_pred HHHHcCCCccccCcCccCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCccHH---H-Hhccc-----c
Confidence 3456788743 122357899 9999999999999999999988 99987776654332 1 12222 3
Q ss_pred CCHHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec
Q 013877 170 GDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 170 ~~~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
.+.++++++||+|++++|.... ..++ ++..+.||+|++|+.++
T Consensus 190 ~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~s 234 (331)
T 1xdw_A 190 VSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCA 234 (331)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECS
T ss_pred CCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECC
Confidence 5889999999999999997643 3555 45778899999988664
No 115
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.86 E-value=2e-09 Score=107.84 Aligned_cols=104 Identities=17% Similarity=0.211 Sum_probs=77.8
Q ss_pred hhccCCccc--cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcC
Q 013877 93 IVRGGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (434)
Q Consensus 93 ~~~~~~~~f--~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~ 170 (434)
-+|+|+|.. ......+.| ++|||||+|.||.++|+.|+.. |++|+++++...+. + +.++. ..
T Consensus 126 ~~~~g~w~~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~-~~~~~-----~~ 189 (333)
T 1dxy_A 126 QLQAGDYEKAGTFIGKELGQ-QTVGVMGTGHIGQVAIKLFKGF------GAKVIAYDPYPMKG---D-HPDFD-----YV 189 (333)
T ss_dssp HHHTTCHHHHTCCCCCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSS---C-CTTCE-----EC
T ss_pred HHHcCCcccccCCCccCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCcchh---h-Hhccc-----cC
Confidence 456777743 222367899 9999999999999999999988 99987776654332 1 12222 34
Q ss_pred CHHhhhccCCEEEEeecchHH-HHHH-HHHHhcCCCCcEEEEec
Q 013877 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 171 ~~~Ea~~~ADiViLavpd~a~-~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
+.+|++++||+|++++|.... ..++ ++..+.||+|++|+.++
T Consensus 190 ~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~s 233 (333)
T 1dxy_A 190 SLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTA 233 (333)
T ss_dssp CHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred CHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECC
Confidence 789999999999999997664 4556 45778899999888554
No 116
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.82 E-value=9.3e-08 Score=97.63 Aligned_cols=92 Identities=13% Similarity=0.065 Sum_probs=66.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-----------C---CCcCCHHhhhc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-----------N---GTLGDIYETIS 177 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-----------~---~~~~~~~Ea~~ 177 (434)
+||+|||+|.||.++|.+|.+ |++|++.++. .+..+...+.+.... . ....+..++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-------G~~V~~~d~~-~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~ 72 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-------QNEVTIVDIL-PSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYK 72 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEECSC-HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-------CCEEEEEECC-HHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhc
Confidence 589999999999999999863 6787665554 333444444443100 0 01346778899
Q ss_pred cCCEEEEeecch-----------HHHHHHHHHHhcCCCCcEEEEec
Q 013877 178 GSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 178 ~ADiViLavpd~-----------a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
++|+||+++|+. ...++++.|.+ ++++++|++.+
T Consensus 73 ~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~S 117 (402)
T 1dlj_A 73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKS 117 (402)
T ss_dssp HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECS
T ss_pred CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeC
Confidence 999999999987 46788889999 99999888733
No 117
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.76 E-value=1.2e-08 Score=103.25 Aligned_cols=93 Identities=18% Similarity=0.245 Sum_probs=70.2
Q ss_pred CEEEEEcccchHHHHHHHHHh-hhhhhcCCcEEEEEe---cCCchhHHHH-HHcCccc----cCC-----------CcCC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGL---RKGSRSFAEA-RAAGFTE----ENG-----------TLGD 171 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrd-s~~~~~~G~~Vivg~---r~~~~s~~~A-~~~G~~~----~~~-----------~~~~ 171 (434)
+||+|||+|+||.++|..|.+ + |++|.++. +. .+..+.+ .+.|... .++ ...+
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~------G~~V~~~~~~~r~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRD------GVEVRVLTLFADE-AERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKD 75 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTST------TEEEEEECCSTTH-HHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESC
T ss_pred ceEEEECCCHHHHHHHHHHHhCC------CCEEEEEeCCCCc-HHHHHHHHhhccceeeeecCCCccceeeccceEEeCC
Confidence 699999999999999999976 7 88888776 32 2334442 2333110 001 1346
Q ss_pred HHhhhccCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 172 IYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
++++++++|+||++||+....+++++|.++++++++|+..
T Consensus 76 ~~~a~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 76 PEIAISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGL 115 (404)
T ss_dssp HHHHHTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEET
T ss_pred HHHHhCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEc
Confidence 7888999999999999999999999999999999887763
No 118
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.74 E-value=1.7e-07 Score=98.28 Aligned_cols=201 Identities=19% Similarity=0.170 Sum_probs=119.1
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCch---hHHHHHH---------------------cC-ccc
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSR---SFAEARA---------------------AG-FTE 164 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~---s~~~A~~---------------------~G-~~~ 164 (434)
++||+|||+|.||.++|.+|.+. .|+ +|+++++...+ ..+...+ .| +..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~-----~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ 92 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA-----PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC 92 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS-----TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHh-----CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE
Confidence 48999999999999999999865 268 88777665441 2222211 12 111
Q ss_pred cCCCcCCHHhhhccCCEEEEeecchH------------HHHHHHHHHhcCCCCcEEEEeccchhhhhh---------ccc
Q 013877 165 ENGTLGDIYETISGSDLVLLLISDAA------------QADNYEKIFSCMKPNSILGLSHGFLLGHLQ---------SMG 223 (434)
Q Consensus 165 ~~~~~~~~~Ea~~~ADiViLavpd~a------------~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~---------~~~ 223 (434)
..+ .+++++||+||+|+|... +..+.+.|.+++++|++|++.+++.....+ ..+
T Consensus 93 ----ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g 167 (478)
T 3g79_A 93 ----TPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESG 167 (478)
T ss_dssp ----ESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHC
T ss_pred ----eCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcC
Confidence 234 688999999999998653 345667899999999999888766432111 111
Q ss_pred ccCCCCccEEEeccC--CChhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHh-CCCcccccchhhhccc
Q 013877 224 LDFPKNIGVIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYRS 300 (434)
Q Consensus 224 i~~~~di~VI~v~Pn--~pg~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~ai-G~~~~iettf~~E~~~ 300 (434)
.....++ .+.-.|. .+|..+..... .+.++ ... +.+..+.+..++..+ +...+.-+.. ..-+.
T Consensus 168 ~~~~~d~-~v~~~Pe~~~~G~a~~~~~~---------~~~Iv-~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~-~~aE~ 233 (478)
T 3g79_A 168 LKAGEDF-ALAHAPERVMVGRLLKNIRE---------HDRIV-GGI--DEASTKRAVELYSPVLTVGQVIPMSA-TAAEV 233 (478)
T ss_dssp CCBTTTB-EEEECCCCCCTTSHHHHHHH---------SCEEE-EES--SHHHHHHHHHHHGGGCSSCCEEEEEH-HHHHH
T ss_pred CCcCCce-eEEeCCccCCccchhhhhcC---------CcEEE-EeC--CHHHHHHHHHHHhhhccCCeEEeCCH-HHHHH
Confidence 1112233 3557784 34544322221 22323 233 457779999999999 6542222211 11111
Q ss_pred ccccchhhhhchHHHHHHHHHHHHHHcCCCHHHHHH
Q 013877 301 DIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (434)
Q Consensus 301 Dlfge~tvL~G~~~aliea~~~~~v~~Gl~~e~A~~ 336 (434)
-.+-+++.+ ..--+++.-+...+.+.|+++++.+.
T Consensus 234 ~Kl~~N~~~-a~~Ia~~nE~~~l~e~~GiD~~~v~~ 268 (478)
T 3g79_A 234 TKTAENTFR-DLQIAAINQLALYCEAMGINVYDVRT 268 (478)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 122233222 22234666677888899999987766
No 119
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.71 E-value=3.5e-08 Score=96.90 Aligned_cols=101 Identities=23% Similarity=0.189 Sum_probs=74.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccC-CC-----cCCHHhhhccCCEEEEe
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-GT-----LGDIYETISGSDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~-~~-----~~~~~Ea~~~ADiViLa 185 (434)
+||+|||+|+||.++|..|. + |++|.+..|.. ...+..++.|+.... +. .....++++.+|+||++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~------g~~V~~~~r~~-~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vila 74 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L------YHDVTVVTRRQ-EQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVT 74 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH-HHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHh-c------CCceEEEECCH-HHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEE
Confidence 79999999999999999999 8 99988777653 334455556875411 00 00013467789999999
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEEEeccchhh-hhhc
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILGLSHGFLLG-HLQS 221 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~-~~~~ 221 (434)
||+.+..++++.+.+. .++++|++..|+... .+.+
T Consensus 75 vK~~~~~~~l~~l~~~-~~~~ivs~~nGi~~~e~l~~ 110 (307)
T 3ego_A 75 VKQHQLQSVFSSLERI-GKTNILFLQNGMGHIHDLKD 110 (307)
T ss_dssp CCGGGHHHHHHHTTSS-CCCEEEECCSSSHHHHHHHT
T ss_pred eCHHHHHHHHHHhhcC-CCCeEEEecCCccHHHHHHH
Confidence 9999999999988875 566667788999864 4443
No 120
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.70 E-value=2.8e-08 Score=87.57 Aligned_cols=114 Identities=7% Similarity=-0.043 Sum_probs=79.4
Q ss_pred ccCCCCEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEE
Q 013877 107 AFNGINQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLV 182 (434)
Q Consensus 107 ~~~g~kkIgIIG~----G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiV 182 (434)
.++- ++|+|||. |+||..++++|++. |++|+..+....+ -.|... ..++.|+.+..|++
T Consensus 11 l~~p-~~IavIGaS~~~g~~G~~~~~~L~~~------G~~V~~vnp~~~~------i~G~~~----~~s~~el~~~vDlv 73 (138)
T 1y81_A 11 SKEF-RKIALVGASKNPAKYGNIILKDLLSK------GFEVLPVNPNYDE------IEGLKC----YRSVRELPKDVDVI 73 (138)
T ss_dssp ---C-CEEEEETCCSCTTSHHHHHHHHHHHT------TCEEEEECTTCSE------ETTEEC----BSSGGGSCTTCCEE
T ss_pred ccCC-CeEEEEeecCCCCCHHHHHHHHHHHC------CCEEEEeCCCCCe------ECCeee----cCCHHHhCCCCCEE
Confidence 3444 89999999 99999999999998 9985444333211 157664 56888988899999
Q ss_pred EEeecchHHHHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCCCCccEEEeccCCChhh
Q 013877 183 LLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (434)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~ 243 (434)
++++|+..+.++++++.. ...+.++.++.++.-...+. .-..++.+ +.||+++-.
T Consensus 74 ii~vp~~~v~~v~~~~~~-~g~~~i~~~~~~~~~~l~~~---a~~~Gi~~--igpnc~g~~ 128 (138)
T 1y81_A 74 VFVVPPKVGLQVAKEAVE-AGFKKLWFQPGAESEEIRRF---LEKAGVEY--SFGRCIMVE 128 (138)
T ss_dssp EECSCHHHHHHHHHHHHH-TTCCEEEECTTSCCHHHHHH---HHHHTCEE--ECSCCHHHH
T ss_pred EEEeCHHHHHHHHHHHHH-cCCCEEEEcCccHHHHHHHH---HHHCCCEE--EcCCcceEE
Confidence 999999999999988766 45566777776664221111 11124454 569998866
No 121
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.69 E-value=2.8e-07 Score=95.52 Aligned_cols=200 Identities=11% Similarity=0.093 Sum_probs=119.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhh---------------h
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYET---------------I 176 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea---------------~ 176 (434)
.|+.|||+|.||.++|.+|.+. |++|+++++. ++..+... .|..+.. ....+|+ +
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~------G~~V~~~D~~-~~kv~~L~-~g~~pi~--epgl~~ll~~~~~~g~l~~ttd~ 81 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH------GVDVLGVDIN-QQTIDKLQ-NGQISIE--EPGLQEVYEEVLSSGKLKVSTTP 81 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHH-TTCCSSC--CTTHHHHHHHHHHTTCEEEESSC
T ss_pred CccEEEeeCHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHH-CCCCCcC--CCCHHHHHHhhcccCceEEeCch
Confidence 8999999999999999999999 9998766654 33333332 2321100 0011111 4
Q ss_pred ccCCEEEEeecchH------------HHHHHHHHHhcCCCCcEEEEeccchhhhh--------hcccccCCCCccEEEec
Q 013877 177 SGSDLVLLLISDAA------------QADNYEKIFSCMKPNSILGLSHGFLLGHL--------QSMGLDFPKNIGVIAVC 236 (434)
Q Consensus 177 ~~ADiViLavpd~a------------~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~--------~~~~i~~~~di~VI~v~ 236 (434)
++||+||+|||... +..+.+.|.++|++|++|++.+++..... ++.+.....++ .+.-.
T Consensus 82 ~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~-~v~~~ 160 (431)
T 3ojo_A 82 EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDI-YLVHC 160 (431)
T ss_dssp CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTE-EEEEC
T ss_pred hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCe-EEEEC
Confidence 57999999999765 34566789999999999988877643211 11111122233 34567
Q ss_pred c--CCChhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHH
Q 013877 237 P--KGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVH 314 (434)
Q Consensus 237 P--n~pg~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~ 314 (434)
| -.+|..+..... .+.++ ... +.++.+.+..++..++...++.++. ..-+.-.+-+++.+ ..--
T Consensus 161 Pe~~~~G~A~~~~~~---------p~~Iv-~G~--~~~~~~~~~~ly~~~~~~~~~~~~~-~~AE~~Kl~~N~~~-a~~I 226 (431)
T 3ojo_A 161 PERVLPGKILEELVH---------NNRII-GGV--TKACIEAGKRVYRTFVQGEMIETDA-RTAEMSKLMENTYR-DVNI 226 (431)
T ss_dssp CCCCCTTSHHHHHHH---------SCEEE-EES--SHHHHHHHHHHHTTTCCSCEEEEEH-HHHHHHHHHHHHHH-HHHH
T ss_pred CCcCCCcchhhcccC---------CCEEE-EeC--CHHHHHHHHHHHHHHhCCcEEeCCH-HHHHHHHHHHHHHH-HHHH
Confidence 7 334544322221 23433 343 5788999999999998643222321 11112222233322 2223
Q ss_pred HHHHHHHHHHHHcCCCHHHHHH
Q 013877 315 GIVESLFRRFTENGMNEDLAYK 336 (434)
Q Consensus 315 aliea~~~~~v~~Gl~~e~A~~ 336 (434)
+++.-+...+.+.|+++++.+.
T Consensus 227 a~~nE~~~l~e~~GiD~~~v~~ 248 (431)
T 3ojo_A 227 ALANELTKICNNLNINVLDVIE 248 (431)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHH
Confidence 4666677888899999887765
No 122
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.67 E-value=1.1e-08 Score=104.54 Aligned_cols=90 Identities=16% Similarity=0.160 Sum_probs=69.9
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
..+.| ++|||||+|+||.++|+.|+.. |++|+++++.. .. ...|.. ..+.+|++++||+|+++
T Consensus 112 ~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~----~~-~~~g~~-----~~~l~ell~~aDvV~l~ 174 (380)
T 2o4c_A 112 ADLAE-RTYGVVGAGQVGGRLVEVLRGL------GWKVLVCDPPR----QA-REPDGE-----FVSLERLLAEADVISLH 174 (380)
T ss_dssp CCGGG-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECHHH----HH-HSTTSC-----CCCHHHHHHHCSEEEEC
T ss_pred cccCC-CEEEEEeCCHHHHHHHHHHHHC------CCEEEEEcCCh----hh-hccCcc-----cCCHHHHHHhCCEEEEe
Confidence 46788 9999999999999999999988 99987655421 11 123432 46899999999999999
Q ss_pred ecchHH-----HHHHH-HHHhcCCCCcEEEEec
Q 013877 186 ISDAAQ-----ADNYE-KIFSCMKPNSILGLSH 212 (434)
Q Consensus 186 vpd~a~-----~~vl~-eI~~~Lk~g~iL~~s~ 212 (434)
+|.... ..++. ++.+.||+|++|+.++
T Consensus 175 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~s 207 (380)
T 2o4c_A 175 TPLNRDGEHPTRHLLDEPRLAALRPGTWLVNAS 207 (380)
T ss_dssp CCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECS
T ss_pred ccCccccccchhhhcCHHHHhhCCCCcEEEECC
Confidence 997764 35553 5788999999988554
No 123
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.64 E-value=1.3e-08 Score=98.67 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=70.7
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEee
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
.++| ++|+|||+|.||.+++..|.+. |.+|.+.+|+.++..+.+.+.|+.. ..+..++++++|+||+++
T Consensus 126 ~~~~-~~v~iiGaG~~g~aia~~L~~~------g~~V~v~~r~~~~~~~l~~~~g~~~----~~~~~~~~~~aDiVi~at 194 (275)
T 2hk9_A 126 EVKE-KSILVLGAGGASRAVIYALVKE------GAKVFLWNRTKEKAIKLAQKFPLEV----VNSPEEVIDKVQVIVNTT 194 (275)
T ss_dssp TGGG-SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSHHHHHHHTTTSCEEE----CSCGGGTGGGCSEEEECS
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHc------CCEEEEEECCHHHHHHHHHHcCCee----ehhHHhhhcCCCEEEEeC
Confidence 4678 9999999999999999999998 8888887776544444444556543 337788899999999999
Q ss_pred cchHHHHHHHHH-HhcCCCCcEEEEecc
Q 013877 187 SDAAQADNYEKI-FSCMKPNSILGLSHG 213 (434)
Q Consensus 187 pd~a~~~vl~eI-~~~Lk~g~iL~~s~G 213 (434)
|+....++...+ .+.+++|++|++...
T Consensus 195 p~~~~~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 195 SVGLKDEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp STTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 988653211112 356788888876543
No 124
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.63 E-value=1.2e-08 Score=104.31 Aligned_cols=151 Identities=17% Similarity=0.115 Sum_probs=96.3
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
..+.| ++|||||+|+||.++|+.|+.. |++|+++++. ... ...+.. ..+.+|++++||+|+++
T Consensus 115 ~~l~g-ktvGIIGlG~IG~~vA~~l~a~------G~~V~~~d~~----~~~-~~~~~~-----~~sl~ell~~aDiV~l~ 177 (381)
T 3oet_A 115 FSLRD-RTIGIVGVGNVGSRLQTRLEAL------GIRTLLCDPP----RAA-RGDEGD-----FRTLDELVQEADVLTFH 177 (381)
T ss_dssp CCGGG-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECHH----HHH-TTCCSC-----BCCHHHHHHHCSEEEEC
T ss_pred CccCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCC----hHH-hccCcc-----cCCHHHHHhhCCEEEEc
Confidence 45788 9999999999999999999988 9998766542 111 112222 56899999999999999
Q ss_pred ecchHH-----HHHH-HHHHhcCCCCcEEEEec-cch------hhhhhcccccCCCCccEEEeccCCChhhHHHHHhhcc
Q 013877 186 ISDAAQ-----ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK 252 (434)
Q Consensus 186 vpd~a~-----~~vl-~eI~~~Lk~g~iL~~s~-G~~------i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~ 252 (434)
+|.... ..++ .+.+..||+|++|+.++ |-. +..+++.. ......||.---|.-+.+ ++.
T Consensus 178 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~-i~gA~LDV~e~EP~~~~~----L~~--- 249 (381)
T 3oet_A 178 TPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQ-PLSVVLDVWEGEPDLNVA----LLE--- 249 (381)
T ss_dssp CCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTC-CEEEEESCCTTTTSCCHH----HHH---
T ss_pred CcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCC-CeEEEeeccccCCCCcch----hhh---
Confidence 996654 3445 35778899999998665 422 12222211 112345666666643222 332
Q ss_pred cccCCCceEEEeecC-CCCHHHHHH-----HHHHHHHhCCC
Q 013877 253 EINGAGINSSFAVHQ-DVDGRATNV-----ALGWSVALGSP 287 (434)
Q Consensus 253 ~~~G~Gv~aliav~q-dvsg~a~e~-----a~~la~aiG~~ 287 (434)
.+.++++|- ..|.++.+. +..+..-++..
T Consensus 250 ------~~~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~~ 284 (381)
T 3oet_A 250 ------AVDIGTSHIAGYTLEGKARGTTQVFEAYSAFIGRE 284 (381)
T ss_dssp ------HSSEECSSCTTCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ------CCEEECCccCcCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 234678886 344454443 34555566653
No 125
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.62 E-value=2.6e-07 Score=94.79 Aligned_cols=98 Identities=15% Similarity=0.213 Sum_probs=71.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--------EEEEEecCCc---hhHHHHH-Hc--------CccccC--CCc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--------VVKVGLRKGS---RSFAEAR-AA--------GFTEEN--GTL 169 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--------~Vivg~r~~~---~s~~~A~-~~--------G~~~~~--~~~ 169 (434)
.||+|||.|+.|.|+|.-|.++ |+ +|.++.|..+ +...... .. |+.-.+ ...
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n------g~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t 108 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN------CKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVAN 108 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHc------CCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEe
Confidence 4899999999999999999987 53 4777766532 1111111 11 111100 014
Q ss_pred CCHHhhhccCCEEEEeecchHHHHHHHHHHhcCCCCcEE-EEeccch
Q 013877 170 GDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFL 215 (434)
Q Consensus 170 ~~~~Ea~~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL-~~s~G~~ 215 (434)
.|+++++++||+||+++|.+...++++++.++++++..| ..+.|+.
T Consensus 109 ~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 109 PDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp SCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred CCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccc
Confidence 578999999999999999999999999999999998865 4667763
No 126
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.60 E-value=3.4e-07 Score=77.29 Aligned_cols=96 Identities=14% Similarity=0.043 Sum_probs=65.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHH-HcCccccCCCcCCHH----hhhccCCEEEEee
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEENGTLGDIY----ETISGSDLVLLLI 186 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~-~~G~~~~~~~~~~~~----Ea~~~ADiViLav 186 (434)
++|+|||+|.+|..+++.|.+. |++|++.++...+ .+... ..|+....+...+.+ ..++++|+|++++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~------g~~v~~~d~~~~~-~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK------GHDIVLIDIDKDI-CKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHH-HHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 7899999999999999999998 9988777665333 33333 346521111122222 2267899999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEEEEeccc
Q 013877 187 SDAAQADNYEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL~~s~G~ 214 (434)
|+......+..+.+.++++.+|..+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 105 (140)
T 1lss_A 78 GKEEVNLMSSLLAKSYGINKTIARISEI 105 (140)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred CCchHHHHHHHHHHHcCCCEEEEEecCH
Confidence 9887665555666667777777655543
No 127
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.58 E-value=5.2e-08 Score=97.70 Aligned_cols=103 Identities=20% Similarity=0.134 Sum_probs=76.4
Q ss_pred hccCCccccc--cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC
Q 013877 94 VRGGRDLFNL--LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (434)
Q Consensus 94 ~~~~~~~f~~--~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~ 171 (434)
++.|+|.... ....+.| ++|||||+|.+|..+|+.++.- |.+|+++++.. + +...+.++. ..+
T Consensus 123 ~~~~~~~~~~~~~~~~l~g-~tvGIiG~G~IG~~va~~~~~f------g~~v~~~d~~~-~--~~~~~~~~~-----~~~ 187 (334)
T 3kb6_A 123 VKKLNFSQDSEILARELNR-LTLGVIGTGRIGSRVAMYGLAF------GMKVLCYDVVK-R--EDLKEKGCV-----YTS 187 (334)
T ss_dssp HHTTCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSC-C--HHHHHTTCE-----ECC
T ss_pred ccccccccccccccceecC-cEEEEECcchHHHHHHHhhccc------CceeeecCCcc-c--hhhhhcCce-----ecC
Confidence 4555553222 2367899 9999999999999999999887 99987665442 2 233445665 468
Q ss_pred HHhhhccCCEEEEeecchHH-HHHHH-HHHhcCCCCcEEEEe
Q 013877 172 IYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLS 211 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~a~-~~vl~-eI~~~Lk~g~iL~~s 211 (434)
.+|++++||+|++++|-... ..++. +.+..||+|++|+-+
T Consensus 188 l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~ 229 (334)
T 3kb6_A 188 LDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINT 229 (334)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEEC
T ss_pred HHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEec
Confidence 99999999999999996554 35554 577889999988844
No 128
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.57 E-value=1.2e-07 Score=92.48 Aligned_cols=94 Identities=17% Similarity=0.250 Sum_probs=70.2
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
..+.| ++|+|||+|.||.++|+.|+.. |.+|++.++...+ .+.+.+.|.... ...+.+++++++|+|+++
T Consensus 151 ~~l~g-~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 151 FTIHG-ANVAVLGLGRVGMSVARKFAAL------GAKVKVGARESDL-LARIAEMGMEPF--HISKAAQELRDVDVCINT 220 (293)
T ss_dssp SCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSHHH-HHHHHHTTSEEE--EGGGHHHHTTTCSEEEEC
T ss_pred CCCCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEECCHHH-HHHHHHCCCeec--ChhhHHHHhcCCCEEEEC
Confidence 35788 9999999999999999999988 9998877775332 344455675420 013677889999999999
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
+|+..+.+ +....|++|.+|++++
T Consensus 221 ~p~~~i~~---~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 221 IPALVVTA---NVLAEMPSHTFVIDLA 244 (293)
T ss_dssp CSSCCBCH---HHHHHSCTTCEEEECS
T ss_pred CChHHhCH---HHHHhcCCCCEEEEec
Confidence 99854422 3455789999888665
No 129
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.56 E-value=7.6e-08 Score=85.26 Aligned_cols=116 Identities=10% Similarity=0.008 Sum_probs=78.9
Q ss_pred ccCCCCEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCc-hhHHHHHHcCccccCCCcCCHHhhhccCCE
Q 013877 107 AFNGINQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDL 181 (434)
Q Consensus 107 ~~~g~kkIgIIG~----G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADi 181 (434)
.|...++|+|||+ |+||..++++|++. |++|+..+.... +. -.|... ..++.|+.+..|+
T Consensus 9 ll~~p~~IavIGas~~~g~~G~~~~~~L~~~------G~~v~~vnp~~~g~~-----i~G~~~----~~sl~el~~~~Dl 73 (145)
T 2duw_A 9 ILTSTRTIALVGASDKPDRPSYRVMKYLLDQ------GYHVIPVSPKVAGKT-----LLGQQG----YATLADVPEKVDM 73 (145)
T ss_dssp HHHHCCCEEEESCCSCTTSHHHHHHHHHHHH------TCCEEEECSSSTTSE-----ETTEEC----CSSTTTCSSCCSE
T ss_pred HHhCCCEEEEECcCCCCCChHHHHHHHHHHC------CCEEEEeCCcccccc-----cCCeec----cCCHHHcCCCCCE
Confidence 3442288999999 89999999999999 988654443320 11 147664 5578888889999
Q ss_pred EEEeecchHHHHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCCCCccEEEeccCCChhh
Q 013877 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~ 243 (434)
+++++|+....++++++.. ...+.+|++...+.-...+. .-..++.+ +.||+++-.
T Consensus 74 vii~vp~~~v~~v~~~~~~-~g~~~i~i~~~~~~~~l~~~---a~~~Gi~~--igpnc~g~~ 129 (145)
T 2duw_A 74 VDVFRNSEAAWGVAQEAIA-IGAKTLWLQLGVINEQAAVL---AREAGLSV--VMDRCPAIE 129 (145)
T ss_dssp EECCSCSTHHHHHHHHHHH-HTCCEEECCTTCCCHHHHHH---HHTTTCEE--ECSCCHHHH
T ss_pred EEEEeCHHHHHHHHHHHHH-cCCCEEEEcCChHHHHHHHH---HHHcCCEE--EcCCeeeEE
Confidence 9999999999999988766 44555666655553211111 11234444 469998866
No 130
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.55 E-value=1.6e-07 Score=91.85 Aligned_cols=94 Identities=21% Similarity=0.346 Sum_probs=70.6
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
..+.| ++|+|||+|.||.++|+.|+.. |.+|++.++...+ .+.+.+.|.... ...+.+++++++|+|+++
T Consensus 153 ~~l~g-~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~d~~~~~-~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 153 YTIHG-SQVAVLGLGRTGMTIARTFAAL------GANVKVGARSSAH-LARITEMGLVPF--HTDELKEHVKDIDICINT 222 (300)
T ss_dssp SCSTT-SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSHHH-HHHHHHTTCEEE--EGGGHHHHSTTCSEEEEC
T ss_pred CCCCC-CEEEEEcccHHHHHHHHHHHHC------CCEEEEEECCHHH-HHHHHHCCCeEE--chhhHHHHhhCCCEEEEC
Confidence 56889 9999999999999999999988 9998887775332 333445565420 024678899999999999
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
+|+..+. ++....|++|.+|++++
T Consensus 223 ~p~~~i~---~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 223 IPSMILN---QTVLSSMTPKTLILDLA 246 (300)
T ss_dssp CSSCCBC---HHHHTTSCTTCEEEECS
T ss_pred CChhhhC---HHHHHhCCCCCEEEEEe
Confidence 9985432 23557899999888664
No 131
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.53 E-value=9.6e-08 Score=94.28 Aligned_cols=90 Identities=12% Similarity=0.156 Sum_probs=67.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcC--ccccCCCcCCHHhhhccCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG--FTEENGTLGDIYETISGSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G--~~~~~~~~~~~~Ea~~~ADiViLavpd 188 (434)
++|+|||+|.||.+++++|.+. .|+ +|.+++|..++..+.+.+.+ +.. +.+.+|+++++|+|+++||.
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~-----~g~~~V~v~dr~~~~~~~l~~~~~~~~~~----~~~~~e~v~~aDiVi~atp~ 206 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQ-----FSFKEVRIWNRTKENAEKFADTVQGEVRV----CSSVQEAVAGADVIITVTLA 206 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CCCSEEEEECSSHHHHHHHHHHSSSCCEE----CSSHHHHHTTCSEEEECCCC
T ss_pred cEEEEECCcHHHHHHHHHHHHh-----CCCcEEEEEcCCHHHHHHHHHHhhCCeEE----eCCHHHHHhcCCEEEEEeCC
Confidence 8999999999999999999864 155 78878776555555555556 543 56889999999999999995
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEeccc
Q 013877 189 AAQADNYEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~~s~G~ 214 (434)
. ..++.. +.+++|++|++...+
T Consensus 207 ~--~~v~~~--~~l~~g~~vi~~g~~ 228 (312)
T 2i99_A 207 T--EPILFG--EWVKPGAHINAVGAS 228 (312)
T ss_dssp S--SCCBCG--GGSCTTCEEEECCCC
T ss_pred C--CcccCH--HHcCCCcEEEeCCCC
Confidence 2 233322 578899988776544
No 132
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.52 E-value=3.9e-08 Score=85.45 Aligned_cols=89 Identities=20% Similarity=0.165 Sum_probs=67.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch
Q 013877 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (434)
Q Consensus 110 g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~ 189 (434)
+ ++|+|||+|.||.++++.|+.. |++|.+..|..++..+.+.+.|.... ...+..++++++|+||.++|..
T Consensus 21 ~-~~v~iiG~G~iG~~~a~~l~~~------g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 21 G-NKILLVGNGMLASEIAPYFSYP------QYKVTVAGRNIDHVRAFAEKYEYEYV--LINDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp C-CEEEEECCSHHHHHHGGGCCTT------TCEEEEEESCHHHHHHHHHHHTCEEE--ECSCHHHHHHTCSEEEECSCCS
T ss_pred C-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEcCCHHHHHHHHHHhCCceE--eecCHHHHhcCCCEEEEeCCCC
Confidence 6 9999999999999999999887 88887777775555566777675421 1457889999999999999976
Q ss_pred HHHHHHHHHHhcCCCCcEEEEe
Q 013877 190 AQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 190 a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
.. ++. ...+++|.++++.
T Consensus 92 ~~--~~~--~~~l~~g~~vid~ 109 (144)
T 3oj0_A 92 TP--IVE--ERSLMPGKLFIDL 109 (144)
T ss_dssp SC--SBC--GGGCCTTCEEEEC
T ss_pred Cc--Eee--HHHcCCCCEEEEc
Confidence 22 111 2567888877755
No 133
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.52 E-value=9.6e-08 Score=100.32 Aligned_cols=99 Identities=17% Similarity=0.197 Sum_probs=74.5
Q ss_pred ccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhcc
Q 013877 99 DLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG 178 (434)
Q Consensus 99 ~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ 178 (434)
|....+ ..+.| ++|+|||+|.||.++|+.|+.. |.+|++.++. ......+...|+. +.++++++++
T Consensus 247 w~r~~~-~~l~G-ktVgIIG~G~IG~~vA~~l~~~------G~~Viv~d~~-~~~~~~a~~~g~~-----~~~l~ell~~ 312 (479)
T 1v8b_A 247 LMRATD-FLISG-KIVVICGYGDVGKGCASSMKGL------GARVYITEID-PICAIQAVMEGFN-----VVTLDEIVDK 312 (479)
T ss_dssp HHHHHC-CCCTT-SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSC-HHHHHHHHTTTCE-----ECCHHHHTTT
T ss_pred hhhccc-cccCC-CEEEEEeeCHHHHHHHHHHHhC------cCEEEEEeCC-hhhHHHHHHcCCE-----ecCHHHHHhc
Confidence 643222 46889 9999999999999999999988 9998776654 3323345667876 4689999999
Q ss_pred CCEEEEeecchHHHHHH-HHHHhcCCCCcEEEEeccc
Q 013877 179 SDLVLLLISDAAQADNY-EKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 179 ADiViLavpd~a~~~vl-~eI~~~Lk~g~iL~~s~G~ 214 (434)
||+|++++.. ..++ .+.++.||+|++|+.++-+
T Consensus 313 aDiVi~~~~t---~~lI~~~~l~~MK~gailiNvgrg 346 (479)
T 1v8b_A 313 GDFFITCTGN---VDVIKLEHLLKMKNNAVVGNIGHF 346 (479)
T ss_dssp CSEEEECCSS---SSSBCHHHHTTCCTTCEEEECSST
T ss_pred CCEEEECCCh---hhhcCHHHHhhcCCCcEEEEeCCC
Confidence 9999999733 2333 3567889999999866543
No 134
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.50 E-value=2.6e-06 Score=93.74 Aligned_cols=212 Identities=13% Similarity=0.142 Sum_probs=136.2
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-----------cCccccC------CCcCC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEEN------GTLGD 171 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~~------~~~~~ 171 (434)
+.++||+|||.|.||..+|..+..+ |++|++.+.. .+..+.+.+ .+..... -+..+
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~a------G~~V~l~D~~-~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 386 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARV------GISVVAVESD-PKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSS 386 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTT------TCEEEEECSS-HHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEES
T ss_pred ccccEEEEEcccHHHHHHHHHHHhC------CCchhcccch-HhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccC
Confidence 4468999999999999999999999 9999876654 322222221 1100000 00122
Q ss_pred HHhhhccCCEEEEeecchHHH--HHHHHHHhcCCCCcEEE-EeccchhhhhhcccccCCCCccEEEeccCCChhhHHHHH
Q 013877 172 IYETISGSDLVLLLISDAAQA--DNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (434)
Q Consensus 172 ~~Ea~~~ADiViLavpd~a~~--~vl~eI~~~Lk~g~iL~-~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly 248 (434)
..+.+++||+||=+++-.... +++.++.+++++++||. -++++.+..+.+ .....-+|+..|+=-|.+.++
T Consensus 387 ~~~~l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~---~~~~p~r~ig~HFfnP~~~m~--- 460 (742)
T 3zwc_A 387 STKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS---STDRPQLVIGTHFFSPAHVMR--- 460 (742)
T ss_dssp CGGGGGSCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEECCSSTTTCC---
T ss_pred cHHHHhhCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHh---hcCCccccccccccCCCCCCc---
Confidence 335678999999999965553 79999999999999884 678888877755 222334799999988877731
Q ss_pred hhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccchhhhhchHHH--HHHHHHHHHHH
Q 013877 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG--IVESLFRRFTE 326 (434)
Q Consensus 249 ~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~tvL~G~~~a--liea~~~~~v~ 326 (434)
.-- |..+...+.+.++.+.++...+|...++ . .+ ..+-+.+-+.. +.|++ .+++
T Consensus 461 ----------LVE-vi~g~~Ts~e~~~~~~~~~~~lgK~pV~-v---kd-------~pGFi~NRi~~~~~~ea~--~l~~ 516 (742)
T 3zwc_A 461 ----------LLE-VIPSRYSSPTTIATVMSLSKKIGKIGVV-V---GN-------CYGFVGNRMLAPYYNQGF--FLLE 516 (742)
T ss_dssp ----------EEE-EEECSSCCHHHHHHHHHHHHHTTCEEEE-C---CC-------STTTTHHHHHHHHHHHHH--HHHH
T ss_pred ----------eEE-EecCCCCCHHHHHHHHHHHHHhCCCCcc-c---CC-------CCCccHHHHhhHHHHHHH--HHHH
Confidence 222 3457788899999999999999975221 1 11 11223333332 33433 3667
Q ss_pred cCCCHHHHHHHHHHHH---HHHHHHHHHHhcHHHHH
Q 013877 327 NGMNEDLAYKNTVECI---TGIISKIISTQGMLAVY 359 (434)
Q Consensus 327 ~Gl~~e~A~~~~~e~l---~Gli~~li~e~G~~~m~ 359 (434)
.|.++++--.. +..+ .| --.|+-.-|++-++
T Consensus 517 eG~~~~~id~a-~~~~G~pmG-Pf~l~D~vGlDv~~ 550 (742)
T 3zwc_A 517 EGSKPEDVDGV-LEEFGFKMG-PFRVSDLAGLDVGW 550 (742)
T ss_dssp TTCCHHHHHHH-HHHHTCSSC-HHHHHHHHCHHHHH
T ss_pred cCCCHHHHHHH-HHHcCCCCC-hHHHHHHhCHHHHH
Confidence 79888775542 2222 14 34556666775443
No 135
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.49 E-value=8e-09 Score=100.52 Aligned_cols=97 Identities=12% Similarity=0.138 Sum_probs=71.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhh-ccCCEEEEeecchH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDAA 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~-~~ADiViLavpd~a 190 (434)
+||+|||+|+||.++|..|.++ |++|.+..|.... .+.....|..+ .....+..+.+ +.+|+||++||+.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~------g~~V~~~~r~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~~~D~vilavk~~~ 74 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS------LPHTTLIGRHAKT-ITYYTVPHAPA-QDIVVKGYEDVTNTFDVIIIAVKTHQ 74 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------CTTCEEEESSCEE-EEEESSTTSCC-EEEEEEEGGGCCSCEEEEEECSCGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHC------CCeEEEEEeccCc-EEEEecCCeec-cceecCchHhcCCCCCEEEEeCCccC
Confidence 7899999999999999999999 8888887776332 11112233211 00012344554 78999999999999
Q ss_pred HHHHHHHHHhcCCCCcE-EEEeccchh
Q 013877 191 QADNYEKIFSCMKPNSI-LGLSHGFLL 216 (434)
Q Consensus 191 ~~~vl~eI~~~Lk~g~i-L~~s~G~~i 216 (434)
..++++++.++++++++ |++..|+..
T Consensus 75 ~~~~l~~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 75 LDAVIPHLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp HHHHGGGHHHHEEEEEEEEECCSSCCC
T ss_pred HHHHHHHHHHhhCCCCEEEEeccCccc
Confidence 99999999999988875 467788865
No 136
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.49 E-value=1e-07 Score=100.52 Aligned_cols=99 Identities=18% Similarity=0.131 Sum_probs=74.0
Q ss_pred ccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhcc
Q 013877 99 DLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG 178 (434)
Q Consensus 99 ~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ 178 (434)
|....+ ..+.| ++|+|||+|.||.++|+.|+.. |.+|++.++.. .....+...|+. ..+++|++++
T Consensus 267 w~~~~g-~~L~G-ktVgIIG~G~IG~~vA~~l~~~------G~~V~v~d~~~-~~~~~a~~~G~~-----~~~l~ell~~ 332 (494)
T 3d64_A 267 IKRATD-VMIAG-KIAVVAGYGDVGKGCAQSLRGL------GATVWVTEIDP-ICALQAAMEGYR-----VVTMEYAADK 332 (494)
T ss_dssp HHHHHC-CCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSCH-HHHHHHHTTTCE-----ECCHHHHTTT
T ss_pred hhhccc-cccCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCh-HhHHHHHHcCCE-----eCCHHHHHhc
Confidence 643222 46889 9999999999999999999987 99987766543 223345556776 4689999999
Q ss_pred CCEEEEeecchHHHHHH-HHHHhcCCCCcEEEEeccc
Q 013877 179 SDLVLLLISDAAQADNY-EKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 179 ADiViLavpd~a~~~vl-~eI~~~Lk~g~iL~~s~G~ 214 (434)
||+|++++.. ..++ .+.++.||+|++|+.++-+
T Consensus 333 aDiVi~~~~t---~~lI~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 333 ADIFVTATGN---YHVINHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp CSEEEECSSS---SCSBCHHHHHHCCTTEEEEECSSS
T ss_pred CCEEEECCCc---ccccCHHHHhhCCCCcEEEEcCCC
Confidence 9999999842 2333 3567789999999866443
No 137
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.45 E-value=2.5e-07 Score=96.09 Aligned_cols=91 Identities=16% Similarity=0.192 Sum_probs=71.3
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
..+.| ++|+|||+|.+|.++|+.|+.. |.+|++.++. ......+...|+. ..+++|++++||+|+++
T Consensus 207 ~~L~G-ktVgIiG~G~IG~~vA~~Lka~------Ga~Viv~D~~-p~~a~~A~~~G~~-----~~sL~eal~~ADVVilt 273 (436)
T 3h9u_A 207 VMIAG-KTACVCGYGDVGKGCAAALRGF------GARVVVTEVD-PINALQAAMEGYQ-----VLLVEDVVEEAHIFVTT 273 (436)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred CcccC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCC-hhhhHHHHHhCCe-----ecCHHHHHhhCCEEEEC
Confidence 46788 9999999999999999999988 9998766554 4344556678886 46899999999999986
Q ss_pred ecchHHHHHHH-HHHhcCCCCcEEEEec
Q 013877 186 ISDAAQADNYE-KIFSCMKPNSILGLSH 212 (434)
Q Consensus 186 vpd~a~~~vl~-eI~~~Lk~g~iL~~s~ 212 (434)
...... +. +....||+|++|+.++
T Consensus 274 ~gt~~i---I~~e~l~~MK~gAIVINvg 298 (436)
T 3h9u_A 274 TGNDDI---ITSEHFPRMRDDAIVCNIG 298 (436)
T ss_dssp SSCSCS---BCTTTGGGCCTTEEEEECS
T ss_pred CCCcCc---cCHHHHhhcCCCcEEEEeC
Confidence 654332 32 5677899999988554
No 138
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.44 E-value=1.2e-07 Score=90.65 Aligned_cols=89 Identities=19% Similarity=0.147 Sum_probs=67.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEee
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
.++| +|+|||+|.||.+++++|.+. |.+|.+.+|+.++..+.+.+.|.. ..+.+++ +++|+|++++
T Consensus 114 ~l~~--~v~iiG~G~~g~~~a~~l~~~------g~~v~v~~r~~~~~~~l~~~~~~~-----~~~~~~~-~~~Divi~~t 179 (263)
T 2d5c_A 114 PLKG--PALVLGAGGAGRAVAFALREA------GLEVWVWNRTPQRALALAEEFGLR-----AVPLEKA-REARLLVNAT 179 (263)
T ss_dssp CCCS--CEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHHTCE-----ECCGGGG-GGCSEEEECS
T ss_pred CCCC--eEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHhccc-----hhhHhhc-cCCCEEEEcc
Confidence 3556 899999999999999999988 888888877655545555555653 3467778 9999999999
Q ss_pred cchHHH---HHHHHHHhcCCCCcEEEEe
Q 013877 187 SDAAQA---DNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 187 pd~a~~---~vl~eI~~~Lk~g~iL~~s 211 (434)
|+..+. .++. .+.+++|++|++.
T Consensus 180 p~~~~~~~~~~l~--~~~l~~g~~viD~ 205 (263)
T 2d5c_A 180 RVGLEDPSASPLP--AELFPEEGAAVDL 205 (263)
T ss_dssp STTTTCTTCCSSC--GGGSCSSSEEEES
T ss_pred CCCCCCCCCCCCC--HHHcCCCCEEEEe
Confidence 998653 2221 4568888887754
No 139
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=98.35 E-value=1.1e-05 Score=79.57 Aligned_cols=172 Identities=16% Similarity=0.211 Sum_probs=124.4
Q ss_pred cCccccCCCcCCHHhhhccCCEEEEeecchH-HHHHHHHHHhcCCCCcEEEEeccch---hh-hhhcccccCCCCccEEE
Q 013877 160 AGFTEENGTLGDIYETISGSDLVLLLISDAA-QADNYEKIFSCMKPNSILGLSHGFL---LG-HLQSMGLDFPKNIGVIA 234 (434)
Q Consensus 160 ~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a-~~~vl~eI~~~Lk~g~iL~~s~G~~---i~-~~~~~~i~~~~di~VI~ 234 (434)
.|+.+ +.|-.|+++++|++|+-+|-.. +.+++++|.+++++|++|+.+.-++ +. .++. +. ++|+.|..
T Consensus 127 aGVkV----tsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTCTipp~~ly~~le~--l~-R~DvgIsS 199 (358)
T 2b0j_A 127 VGLKV----TSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACTIPTTKFAKIFKD--LG-REDLNITS 199 (358)
T ss_dssp GTCEE----ESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECSSSCHHHHHHHHHH--TT-CTTSEEEE
T ss_pred cCcEe----ecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecccCCCHHHHHHHHHH--hC-cccCCeec
Confidence 67776 6788899999999999999766 7899999999999999998776543 22 2222 23 78999999
Q ss_pred eccCC-ChhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC-cccccchhhhcccccccchhhhhch
Q 013877 235 VCPKG-MGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP-FTFATTLEQEYRSDIFGERGILLGA 312 (434)
Q Consensus 235 v~Pn~-pg~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~-~~iettf~~E~~~Dlfge~tvL~G~ 312 (434)
.||-+ |++ .| -.. +. ..-+|.++.+...+|+...|.. +.+. .|+.+..+-.+-.
T Consensus 200 ~HPaaVPgt-------~G-------q~~-~g-~~yAtEEqIeklveLaksa~k~ay~vP--------Adl~SpV~DMgs~ 255 (358)
T 2b0j_A 200 YHPGCVPEM-------KG-------QVY-IA-EGYASEEAVNKLYEIGKIARGKAFKMP--------ANLIGPVCDMCSA 255 (358)
T ss_dssp CBCSSCTTT-------CC-------CEE-EE-ESSSCHHHHHHHHHHHHHHHSCEEEEE--------HHHHHHHHSTTHH
T ss_pred cCCCCCCCC-------CC-------ccc-cc-cccCCHHHHHHHHHHHHHhCCCeEecc--------hhhccchhhhHHH
Confidence 99933 333 22 222 32 5568999999999999999975 1221 2344333333333
Q ss_pred HHH----HHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcC
Q 013877 313 VHG----IVESLFRRFT-ENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFS 363 (434)
Q Consensus 313 ~~a----liea~~~~~v-~~Gl~~e~A~~~~~e~l~Gli~~li~e~G~~~m~~~vs 363 (434)
+.+ .+..-++... -.|-|.+++-+.+.++|.. ++.|+...|+..|.+.+.
T Consensus 256 vTAv~~AGiL~Y~~~vtkIlgAP~~mie~q~~esL~t-iasLve~~GI~gm~k~Ln 310 (358)
T 2b0j_A 256 VTATVYAGLLAYRDAVTKILGAPADFAQMMADEALTQ-IHNLMKEKGIANMEEALD 310 (358)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHH-HHHHHHHHCGGGHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHhcC
Confidence 333 2233344443 4599999999999999985 999999999999988876
No 140
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.35 E-value=1.1e-06 Score=86.14 Aligned_cols=95 Identities=15% Similarity=0.119 Sum_probs=64.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCC--cEEEEEecCCchhHHHHHHcC---------ccccCCCcCCHHhhhccC
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARAAG---------FTEENGTLGDIYETISGS 179 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G--~~Vivg~r~~~~s~~~A~~~G---------~~~~~~~~~~~~Ea~~~A 179 (434)
|+||+|||.|+||.++|..|..+ | .+|++.++..++....+.+.+ ... ...+. +++++|
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~------g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~d~-~~~~~a 70 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ------GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNI---VINDW-AALADA 70 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEE---EESCG-GGGTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEE---EeCCH-HHhCCC
Confidence 47999999999999999999988 8 578777665433333332211 111 02455 788999
Q ss_pred CEEEEeecchHH--------------------HHHHHHHHhcCCCCcE-EEEeccchh
Q 013877 180 DLVLLLISDAAQ--------------------ADNYEKIFSCMKPNSI-LGLSHGFLL 216 (434)
Q Consensus 180 DiViLavpd~a~--------------------~~vl~eI~~~Lk~g~i-L~~s~G~~i 216 (434)
|+||+++|+... .++++++.++. ++.+ |.++-+..+
T Consensus 71 DvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 71 DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDV 127 (309)
T ss_dssp SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHH
T ss_pred CEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHHH
Confidence 999999997653 46666777765 4554 445555543
No 141
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.34 E-value=1.2e-06 Score=91.20 Aligned_cols=94 Identities=24% Similarity=0.255 Sum_probs=72.8
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
..+.| ++|+|||+|.+|..+|+.++.. |.+|++..+. +.....+...|+. +.+++|++++||+|+++
T Consensus 243 ~~L~G-KTVgVIG~G~IGr~vA~~lraf------Ga~Viv~d~d-p~~a~~A~~~G~~-----vv~LeElL~~ADIVv~a 309 (464)
T 3n58_A 243 VMMAG-KVAVVCGYGDVGKGSAQSLAGA------GARVKVTEVD-PICALQAAMDGFE-----VVTLDDAASTADIVVTT 309 (464)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHHTTCE-----ECCHHHHGGGCSEEEEC
T ss_pred CcccC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEeCC-cchhhHHHhcCce-----eccHHHHHhhCCEEEEC
Confidence 46888 9999999999999999999988 9998876554 3334456667886 46899999999999998
Q ss_pred ecchHHHHHH-HHHHhcCCCCcEEEEeccch
Q 013877 186 ISDAAQADNY-EKIFSCMKPNSILGLSHGFL 215 (434)
Q Consensus 186 vpd~a~~~vl-~eI~~~Lk~g~iL~~s~G~~ 215 (434)
+... .++ .+.+..||+|++|+.++-+.
T Consensus 310 tgt~---~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 310 TGNK---DVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp CSSS---SSBCHHHHHHSCTTEEEEECSSST
T ss_pred CCCc---cccCHHHHhcCCCCeEEEEcCCCC
Confidence 7532 234 35677899999998665443
No 142
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.30 E-value=1.1e-06 Score=82.73 Aligned_cols=78 Identities=23% Similarity=0.242 Sum_probs=58.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCCchhHHHHHHcCccccCCCcCCHHhhh-ccCCEEEEeecch
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDA 189 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~-~~ADiViLavpd~ 189 (434)
+||||||+|.||..++++|.+. |++++ ++++. .+. .+ . +.+++|++ .++|+|++++|+.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~------g~~lv~v~d~~-~~~----~~---~-----~~~~~~l~~~~~DvVv~~~~~~ 61 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN------GFEIAAILDVR-GEH----EK---M-----VRGIDEFLQREMDVAVEAASQQ 61 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEECSS-CCC----TT---E-----ESSHHHHTTSCCSEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHhcC------CCEEEEEEecC-cch----hh---h-----cCCHHHHhcCCCCEEEECCCHH
Confidence 4899999999999999999977 88874 44443 321 11 2 46888888 6999999999999
Q ss_pred HHHHHHHHHHhcCCCCcEEEEe
Q 013877 190 AQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 190 a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
.+.+++... ++.|+.+++.
T Consensus 62 ~~~~~~~~~---l~~G~~vv~~ 80 (236)
T 2dc1_A 62 AVKDYAEKI---LKAGIDLIVL 80 (236)
T ss_dssp HHHHHHHHH---HHTTCEEEES
T ss_pred HHHHHHHHH---HHCCCcEEEE
Confidence 888777543 4567766544
No 143
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=98.29 E-value=1e-06 Score=87.24 Aligned_cols=122 Identities=12% Similarity=0.146 Sum_probs=85.7
Q ss_pred cCCCCEEEEE-cc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEE
Q 013877 108 FNGINQIGVI-GW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVL 183 (434)
Q Consensus 108 ~~g~kkIgII-G~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiVi 183 (434)
|.- ++|+|| |+ |++|..++++|++. |+++++..++.... .+-.|+.. ..+++|+.+ ..|+++
T Consensus 11 ~~~-~siaVV~Gasg~~G~~~~~~l~~~------G~~~v~~VnP~~~g---~~i~G~~v----y~sl~el~~~~~vD~av 76 (305)
T 2fp4_A 11 VDK-NTKVICQGFTGKQGTFHSQQALEY------GTNLVGGTTPGKGG---KTHLGLPV----FNTVKEAKEQTGATASV 76 (305)
T ss_dssp CCT-TCEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHHCCCEEE
T ss_pred hCC-CcEEEEECCCCCHHHHHHHHHHHC------CCcEEEEeCCCcCc---ceECCeee----echHHHhhhcCCCCEEE
Confidence 344 889999 99 99999999999999 99865555543211 01257764 567999888 899999
Q ss_pred EeecchHHHHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCCCCc-cEEEeccCCChhhHH
Q 013877 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNI-GVIAVCPKGMGPSVR 245 (434)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di-~VI~v~Pn~pg~~vr 245 (434)
+++|+..+.++++++... .-..+|.+++|+..+...+ ........ .+..+.||+||...+
T Consensus 77 I~vP~~~~~~~~~e~i~~-Gi~~iv~~t~G~~~~~~~~-l~~~a~~~~gi~liGPnc~Gii~p 137 (305)
T 2fp4_A 77 IYVPPPFAAAAINEAIDA-EVPLVVCITEGIPQQDMVR-VKHRLLRQGKTRLIGPNCPGVINP 137 (305)
T ss_dssp ECCCHHHHHHHHHHHHHT-TCSEEEECCCCCCHHHHHH-HHHHHTTCSSCEEECSSSCEEEET
T ss_pred EecCHHHHHHHHHHHHHC-CCCEEEEECCCCChHHHHH-HHHHHHhcCCcEEEeCCCCeEecc
Confidence 999999999999885542 2244688999997543111 11222333 455688999887753
No 144
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.28 E-value=8.3e-07 Score=90.77 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=70.3
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccC---------CC----------
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---------GT---------- 168 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~---------~~---------- 168 (434)
+.+ .||+|||+|.+|...++.++.. |.+|++.+++.. ..+.+.+.|....+ +.
T Consensus 182 v~~-~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~-~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~ 253 (381)
T 3p2y_A 182 VKP-ASALVLGVGVAGLQALATAKRL------GAKTTGYDVRPE-VAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERA 253 (381)
T ss_dssp ECC-CEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSGG-GHHHHHHTTCEECCCC-------------CHHHHH
T ss_pred cCC-CEEEEECchHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHcCCeEEeccccccccccchhhhhHHHHh
Confidence 466 8999999999999999999988 999877766544 45666666654210 00
Q ss_pred --cCCHHhhhccCCEEEEee--cchHHHHHH-HHHHhcCCCCcEEEEec
Q 013877 169 --LGDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 169 --~~~~~Ea~~~ADiViLav--pd~a~~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
..+++++++++|+||.++ |......++ ++....||||.+|++.+
T Consensus 254 ~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 254 QQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred hhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 124568999999999886 432233333 56778899999999885
No 145
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.27 E-value=7.5e-07 Score=92.41 Aligned_cols=91 Identities=23% Similarity=0.269 Sum_probs=70.4
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
..+.| ++|+|||+|.+|.++|+.|+.. |.+|++.++. +.....|...|+. +.+++|+++++|+|++|
T Consensus 216 ~~L~G-ktV~ViG~G~IGk~vA~~Lra~------Ga~Viv~D~d-p~ra~~A~~~G~~-----v~~Leeal~~ADIVi~a 282 (435)
T 3gvp_A 216 MMFGG-KQVVVCGYGEVGKGCCAALKAM------GSIVYVTEID-PICALQACMDGFR-----LVKLNEVIRQVDIVITC 282 (435)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred ceecC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCC-hhhhHHHHHcCCE-----eccHHHHHhcCCEEEEC
Confidence 46788 9999999999999999999988 9998776654 3334456677876 46899999999999997
Q ss_pred ecchHHHHHHH-HHHhcCCCCcEEEEec
Q 013877 186 ISDAAQADNYE-KIFSCMKPNSILGLSH 212 (434)
Q Consensus 186 vpd~a~~~vl~-eI~~~Lk~g~iL~~s~ 212 (434)
+- ...++. +.+..||+|.+|+.++
T Consensus 283 tg---t~~lI~~e~l~~MK~gailINvg 307 (435)
T 3gvp_A 283 TG---NKNVVTREHLDRMKNSCIVCNMG 307 (435)
T ss_dssp SS---CSCSBCHHHHHHSCTTEEEEECS
T ss_pred CC---CcccCCHHHHHhcCCCcEEEEec
Confidence 32 123443 5667899999888554
No 146
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.25 E-value=1.9e-06 Score=90.77 Aligned_cols=92 Identities=22% Similarity=0.321 Sum_probs=72.6
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEee
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
.+.| ++|+|||+|.||..+|+.++.. |.+|++.++. ....+.|.+.|+. +.+.+++++++|+|++++
T Consensus 271 ~l~G-ktV~IiG~G~IG~~~A~~lka~------Ga~Viv~d~~-~~~~~~A~~~Ga~-----~~~l~e~l~~aDvVi~at 337 (494)
T 3ce6_A 271 LIGG-KKVLICGYGDVGKGCAEAMKGQ------GARVSVTEID-PINALQAMMEGFD-----VVTVEEAIGDADIVVTAT 337 (494)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHGGGCSEEEECS
T ss_pred CCCc-CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCE-----EecHHHHHhCCCEEEECC
Confidence 5678 9999999999999999999988 9887765544 4445677788886 357888999999999999
Q ss_pred cchHHHHHHH-HHHhcCCCCcEEEEeccc
Q 013877 187 SDAAQADNYE-KIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 187 pd~a~~~vl~-eI~~~Lk~g~iL~~s~G~ 214 (434)
+.... +. +..+.|++|.+|+.++-+
T Consensus 338 gt~~~---i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 338 GNKDI---IMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp SSSCS---BCHHHHHHSCTTCEEEECSSS
T ss_pred CCHHH---HHHHHHHhcCCCcEEEEeCCC
Confidence 86542 33 566779999988866543
No 147
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=98.25 E-value=1.4e-06 Score=85.49 Aligned_cols=117 Identities=15% Similarity=0.209 Sum_probs=79.3
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecc
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd 188 (434)
.||+|||+ |.||..++++|++. |++++...++.... ....|+.. ..+++|+.+ ..|++++++|+
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~------g~~~V~~V~p~~~g---~~~~G~~v----y~sl~el~~~~~~D~viI~tP~ 74 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAY------GTKMVGGVTPGKGG---TTHLGLPV----FNTVREAVAATGATASVIYVPA 74 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHHCCCEEEECCCG
T ss_pred CEEEEECCCChHHHHHHHHHHHC------CCeEEEEeCCCccc---ceeCCeec----cCCHHHHhhcCCCCEEEEecCH
Confidence 78999999 99999999999998 88865455442110 01356654 568899888 89999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCCCCccEEEeccCCChhh
Q 013877 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~ 243 (434)
..+.+++.+.... ....+|.++.|+..+..++ ....-+...+..+.||++|-.
T Consensus 75 ~~~~~~~~ea~~~-Gi~~iVi~t~G~~~~~~~~-l~~~A~~~gv~liGPNc~Gi~ 127 (288)
T 2nu8_A 75 PFCKDSILEAIDA-GIKLIITITEGIPTLDMLT-VKVKLDEAGVRMIGPNTPGVI 127 (288)
T ss_dssp GGHHHHHHHHHHT-TCSEEEECCCCCCHHHHHH-HHHHHHHHTCEEECSSCCEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEecCCccee
Confidence 9999999876543 1223566889997543111 111112223444678887655
No 148
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.23 E-value=1.5e-06 Score=85.31 Aligned_cols=118 Identities=14% Similarity=0.188 Sum_probs=81.2
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecc
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd 188 (434)
+||+|+|+ |+||..+++++++. |++++....+.... ....|+.. ..+++|+.+ ..|++++++|+
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~------g~~~v~~VnP~~~g---~~i~G~~v----y~sl~el~~~~~~Dv~Ii~vp~ 74 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTY------GTKIVAGVTPGKGG---MEVLGVPV----YDTVKEAVAHHEVDASIIFVPA 74 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHSCCSEEEECCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHHc------CCeEEEEECCCCCC---ceECCEEe----eCCHHHHhhcCCCCEEEEecCH
Confidence 78999998 99999999999998 98865555543210 01256664 567899888 89999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCCCCccEEEeccCCChhhH
Q 013877 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~v 244 (434)
..+.+++++.... .-..+|++++||.....++ .....+...+..+.||++|-..
T Consensus 75 ~~~~~~~~ea~~~-Gi~~vVi~t~G~~~~~~~~-l~~~a~~~gi~vigPNc~Gii~ 128 (288)
T 1oi7_A 75 PAAADAALEAAHA-GIPLIVLITEGIPTLDMVR-AVEEIKALGSRLIGGNCPGIIS 128 (288)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECCSCCCHHHHHH-HHHHHHHHTCEEEESSSCEEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEeCCCCeEEc
Confidence 9999999886543 2233677899997532111 1111122344456688887653
No 149
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.23 E-value=8.4e-07 Score=89.43 Aligned_cols=96 Identities=19% Similarity=0.165 Sum_probs=67.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc----CccccCCCcCCHHhhhccCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GFTEENGTLGDIYETISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~----G~~~~~~~~~~~~Ea~~~ADiViLavp 187 (434)
++|+|||+|.||.+++++|.... ...+|.+++|..++..+.+.+. |+.. ..+.+.+++++++|+|++|||
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~----~~~~V~V~~r~~~~a~~la~~~~~~~g~~~--~~~~~~~eav~~aDiVi~aTp 203 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHL----GIEEIVAYDTDPLATAKLIANLKEYSGLTI--RRASSVAEAVKGVDIITTVTA 203 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHS----CCCEEEEECSSHHHHHHHHHHHTTCTTCEE--EECSSHHHHHTTCSEEEECCC
T ss_pred CeEEEECCcHHHHHHHHHHHHhC----CCcEEEEEcCCHHHHHHHHHHHHhccCceE--EEeCCHHHHHhcCCEEEEecc
Confidence 89999999999999999986530 0237888887766555555553 5321 014688999999999999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEEEeccch
Q 013877 188 DAAQADNYEKIFSCMKPNSILGLSHGFL 215 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~~s~G~~ 215 (434)
......++. .+.+++|+.|.....+.
T Consensus 204 s~~~~pvl~--~~~l~~G~~V~~vgs~~ 229 (350)
T 1x7d_A 204 DKAYATIIT--PDMLEPGMHLNAVGGDC 229 (350)
T ss_dssp CSSEEEEEC--GGGCCTTCEEEECSCCB
T ss_pred CCCCCceec--HHHcCCCCEEEECCCCC
Confidence 864222332 25688999887665543
No 150
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.23 E-value=2.1e-06 Score=83.43 Aligned_cols=86 Identities=13% Similarity=0.064 Sum_probs=64.0
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEE-EEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch
Q 013877 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (434)
Q Consensus 112 kkIgIIG~G~mG~A-~A~nLrds~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~ 189 (434)
.||||||+|.||.. ++.+|++. .+++++ +.++..++..+.+.+.|+.. ..+.++++++.|+|++++|+.
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~~~~~----~~~~~~ll~~~D~V~i~tp~~ 77 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKS-----ERFEFVGAFTPNKVKREKICSDYRIMP----FDSIESLAKKCDCIFLHSSTE 77 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSC-----SSSEEEEEECSCHHHHHHHHHHHTCCB----CSCHHHHHTTCSEEEECCCGG
T ss_pred CcEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHHhcCCEEEEeCCcH
Confidence 68999999999996 88888764 156665 44444444455666678763 678999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcEEE
Q 013877 190 AQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 190 a~~~vl~eI~~~Lk~g~iL~ 209 (434)
.+.++..... +.|+-|.
T Consensus 78 ~h~~~~~~al---~~gk~vl 94 (308)
T 3uuw_A 78 THYEIIKILL---NLGVHVY 94 (308)
T ss_dssp GHHHHHHHHH---HTTCEEE
T ss_pred hHHHHHHHHH---HCCCcEE
Confidence 9988876543 3455443
No 151
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.22 E-value=2.8e-06 Score=83.76 Aligned_cols=80 Identities=18% Similarity=0.166 Sum_probs=60.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd 188 (434)
.||||||+|+||..++.+|++. .+++++. .++..++..+.+.+.|... ..+.+++++ +.|+|++++|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAAN-----PDLELVVIADPFIEGAQRLAEANGAEA----VASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHTTTCEE----ESSHHHHTTCSCCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHcCCce----eCCHHHHhcCCCCCEEEEeCCc
Confidence 6899999999999999999875 1566653 3443334445566667553 678999998 89999999999
Q ss_pred hHHHHHHHHHHh
Q 013877 189 AAQADNYEKIFS 200 (434)
Q Consensus 189 ~a~~~vl~eI~~ 200 (434)
..+.++......
T Consensus 76 ~~h~~~~~~al~ 87 (344)
T 3euw_A 76 STHVDLITRAVE 87 (344)
T ss_dssp GGHHHHHHHHHH
T ss_pred hhhHHHHHHHHH
Confidence 999988766443
No 152
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.18 E-value=4.3e-06 Score=82.38 Aligned_cols=80 Identities=14% Similarity=0.151 Sum_probs=60.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd 188 (434)
.||||||+|.||..++.+|++. .+++++. .++..++..+.+.+.|+.. ...+.+++++ +.|+|++++|+
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 77 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRES-----AQAEVRGIASRRLENAQKMAKELAIPV---AYGSYEELCKDETIDIIYIPTYN 77 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHS-----SSEEEEEEBCSSSHHHHHHHHHTTCCC---CBSSHHHHHHCTTCSEEEECCCG
T ss_pred EEEEEECchHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHHHcCCCc---eeCCHHHHhcCCCCCEEEEcCCC
Confidence 5899999999999999999885 1566653 3444445555666777631 1578999987 79999999999
Q ss_pred hHHHHHHHHHH
Q 013877 189 AAQADNYEKIF 199 (434)
Q Consensus 189 ~a~~~vl~eI~ 199 (434)
..+.++.....
T Consensus 78 ~~h~~~~~~al 88 (330)
T 3e9m_A 78 QGHYSAAKLAL 88 (330)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988776543
No 153
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.18 E-value=3.8e-06 Score=82.44 Aligned_cols=78 Identities=21% Similarity=0.212 Sum_probs=59.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd 188 (434)
.||||||+|.||..++.+|++. .+++++. .++..++..+.+.+.|+. ..+.+++++ +.|+|++++|+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~D~V~i~tp~ 73 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGN-----ADARLVAVADAFPAAAEAIAGAYGCE-----VRTIDAIEAAADIDAVVICTPT 73 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHHTTCE-----ECCHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHhhC-----CCcEEEEEECCCHHHHHHHHHHhCCC-----cCCHHHHhcCCCCCEEEEeCCc
Confidence 6899999999999999999875 1566653 444434444556666764 468999988 79999999999
Q ss_pred hHHHHHHHHHH
Q 013877 189 AAQADNYEKIF 199 (434)
Q Consensus 189 ~a~~~vl~eI~ 199 (434)
..+.++.....
T Consensus 74 ~~h~~~~~~al 84 (331)
T 4hkt_A 74 DTHADLIERFA 84 (331)
T ss_dssp GGHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 99988776543
No 154
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.17 E-value=3.8e-06 Score=83.29 Aligned_cols=87 Identities=9% Similarity=0.060 Sum_probs=63.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd 188 (434)
.||||||+|.||..++.+|++.. .+++++. .++..++..+.+.+.|+.. ..+.+|+++ +.|+|++|+|+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~----~~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp~ 85 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHA----DRAELIDVCDIDPAALKAAVERTGARG----HASLTDMLAQTDADIVILTTPS 85 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTT----TTEEEEEEECSSHHHHHHHHHHHCCEE----ESCHHHHHHHCCCSEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhCC----CCeEEEEEEcCCHHHHHHHHHHcCCce----eCCHHHHhcCCCCCEEEECCCc
Confidence 68999999999999999998740 1566553 4444344445566678754 678999987 79999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEE
Q 013877 189 AAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
..+.++..... +.|+-|.
T Consensus 86 ~~h~~~~~~al---~~gk~v~ 103 (354)
T 3q2i_A 86 GLHPTQSIECS---EAGFHVM 103 (354)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHHH---HCCCCEE
Confidence 99988776543 3455443
No 155
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.17 E-value=6.1e-06 Score=72.32 Aligned_cols=102 Identities=15% Similarity=0.090 Sum_probs=64.4
Q ss_pred cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHH-HcCccccCCCcCC---HHhh-hcc
Q 013877 104 LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEENGTLGD---IYET-ISG 178 (434)
Q Consensus 104 ~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~-~~G~~~~~~~~~~---~~Ea-~~~ 178 (434)
.++...+ ++|.|||+|.+|..+++.|++. |++|++..+...+ .+.+. ..|.....+...+ ..++ +++
T Consensus 13 ~~~~~~~-~~v~IiG~G~iG~~la~~L~~~------g~~V~vid~~~~~-~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 13 MSKKQKS-KYIVIFGCGRLGSLIANLASSS------GHSVVVVDKNEYA-FHRLNSEFSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp ----CCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCGGG-GGGSCTTCCSEEEESCTTSHHHHHTTTGGG
T ss_pred hhcccCC-CcEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHH-HHHHHhcCCCcEEEecCCCHHHHHHcCccc
Confidence 3677778 9999999999999999999998 9988777665433 33333 4454321111222 2233 678
Q ss_pred CCEEEEeecchHHHHHHHHHHhcCCCCc-EEEEecc
Q 013877 179 SDLVLLLISDAAQADNYEKIFSCMKPNS-ILGLSHG 213 (434)
Q Consensus 179 ADiViLavpd~a~~~vl~eI~~~Lk~g~-iL~~s~G 213 (434)
+|+||+++++......+..+...+.+.. ++..+.+
T Consensus 85 ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 85 ADMVFAFTNDDSTNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp CSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 9999999999777665555555444433 4444433
No 156
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.16 E-value=1.3e-05 Score=68.71 Aligned_cols=94 Identities=16% Similarity=0.053 Sum_probs=62.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHh---h-hccCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE---T-ISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~E---a-~~~ADiViLavp 187 (434)
++|.|+|+|.+|.++++.|.+. |++|++.++. +...+.+.+.|+....+...+.+. + ++++|+||+++|
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~------g~~V~~id~~-~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA------GKKVLAVDKS-KEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESC-HHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 7899999999999999999999 9998766654 444566666676421112233322 1 468999999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEEEec
Q 013877 188 DAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
+......+-.....+....++..+.
T Consensus 80 ~~~~n~~~~~~a~~~~~~~iia~~~ 104 (141)
T 3llv_A 80 DDEFNLKILKALRSVSDVYAIVRVS 104 (141)
T ss_dssp CHHHHHHHHHHHHHHCCCCEEEEES
T ss_pred CHHHHHHHHHHHHHhCCceEEEEEc
Confidence 7665543334333344445555443
No 157
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.15 E-value=8.5e-06 Score=71.85 Aligned_cols=121 Identities=10% Similarity=0.065 Sum_probs=79.9
Q ss_pred cccCCCCEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCE
Q 013877 106 DAFNGINQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDL 181 (434)
Q Consensus 106 ~~~~g~kkIgIIG~----G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADi 181 (434)
..|+..++|+|||. |.+|..++++|++. |++| +......+ .-.|... ..++.|+....|+
T Consensus 17 ~ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~------G~~v-~~Vnp~~~-----~i~G~~~----y~sl~~l~~~vDl 80 (144)
T 2d59_A 17 EILTRYKKIALVGASPKPERDANIVMKYLLEH------GYDV-YPVNPKYE-----EVLGRKC----YPSVLDIPDKIEV 80 (144)
T ss_dssp HHHHHCCEEEEETCCSCTTSHHHHHHHHHHHT------TCEE-EEECTTCS-----EETTEEC----BSSGGGCSSCCSE
T ss_pred HHHcCCCEEEEEccCCCCCchHHHHHHHHHHC------CCEE-EEECCCCC-----eECCeec----cCCHHHcCCCCCE
Confidence 34541289999999 79999999999998 9974 33332211 1146654 5678888888999
Q ss_pred EEEeecchHHHHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCCCCccEEEeccCCChhhHHHHH
Q 013877 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly 248 (434)
+++++|+..+.++++++...-. + .+++..|+.-..+.+ ..-..++.+ +.||+++-...+++
T Consensus 81 vvi~vp~~~~~~vv~~~~~~gi-~-~i~~~~g~~~~~l~~--~a~~~Gi~v--vGpnc~gv~~~~~~ 141 (144)
T 2d59_A 81 VDLFVKPKLTMEYVEQAIKKGA-K-VVWFQYNTYNREASK--KADEAGLII--VANRCMMREHERLL 141 (144)
T ss_dssp EEECSCHHHHHHHHHHHHHHTC-S-EEEECTTCCCHHHHH--HHHHTTCEE--EESCCHHHHHHHHH
T ss_pred EEEEeCHHHHHHHHHHHHHcCC-C-EEEECCCchHHHHHH--HHHHcCCEE--EcCCchhhcchhhc
Confidence 9999999999999988665432 2 344556653211111 011235554 45999998876654
No 158
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.13 E-value=3.7e-06 Score=83.08 Aligned_cols=80 Identities=25% Similarity=0.265 Sum_probs=59.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd 188 (434)
.||||||+|.||..++.+|++. .+++++. .++..++..+.+.+.|+.. ...+.+++++ +.|+|++|+|+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMI-----DDAILYAISDVREDRLREMKEKLGVEK---AYKDPHELIEDPNVDAVLVCSST 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGS-----TTEEEEEEECSCHHHHHHHHHHHTCSE---EESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEcCCHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHhCCCc---eeCCHHHHhcCCCCCEEEEcCCC
Confidence 6899999999999999999874 1566653 3444344445566667631 1578999988 79999999999
Q ss_pred hHHHHHHHHHH
Q 013877 189 AAQADNYEKIF 199 (434)
Q Consensus 189 ~a~~~vl~eI~ 199 (434)
..+.++.....
T Consensus 75 ~~h~~~~~~al 85 (344)
T 3ezy_A 75 NTHSELVIACA 85 (344)
T ss_dssp GGHHHHHHHHH
T ss_pred cchHHHHHHHH
Confidence 99988776543
No 159
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.12 E-value=5.4e-06 Score=81.90 Aligned_cols=86 Identities=17% Similarity=0.126 Sum_probs=62.5
Q ss_pred CEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEEE-EecCCchhHHHHHHcCc--cccCCCcCCHHhhhcc--CCEEEEe
Q 013877 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKV-GLRKGSRSFAEARAAGF--TEENGTLGDIYETISG--SDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLr-ds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~--~~~~~~~~~~~Ea~~~--ADiViLa 185 (434)
.||||||+|.||..++.+|+ +. .+++++. .++..++..+.+.+.|+ .. ..+.+|++++ .|+|+++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~-----~~~~l~av~d~~~~~~~~~~~~~g~~~~~----~~~~~~ll~~~~~D~V~i~ 73 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKL-----SGAEIVAVTDVNQEAAQKVVEQYQLNATV----YPNDDSLLADENVDAVLVT 73 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTC-----SSEEEEEEECSSHHHHHHHHHHTTCCCEE----ESSHHHHHHCTTCCEEEEC
T ss_pred EEEEEECccHHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCCee----eCCHHHHhcCCCCCEEEEC
Confidence 58999999999999999998 42 1566553 34443444556667773 32 5789999876 8999999
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEE
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
+|+..+.++.... ++.|+-|.
T Consensus 74 tp~~~h~~~~~~a---l~~Gk~vl 94 (344)
T 3mz0_A 74 SWGPAHESSVLKA---IKAQKYVF 94 (344)
T ss_dssp SCGGGHHHHHHHH---HHTTCEEE
T ss_pred CCchhHHHHHHHH---HHCCCcEE
Confidence 9999998877654 34455443
No 160
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.10 E-value=1.6e-05 Score=68.75 Aligned_cols=75 Identities=21% Similarity=0.268 Sum_probs=54.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHH---h-hhccCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---E-TISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~---E-a~~~ADiViLavp 187 (434)
++|.|||+|.+|..+|+.|++. |++|++.++. +...+.+.+.|+....+...+.+ + -++++|+|++++|
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~~-~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS------DIPLVVIETS-RTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEESC-HHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 5899999999999999999998 9998766654 45566677778743211122222 2 2578999999999
Q ss_pred chHHHH
Q 013877 188 DAAQAD 193 (434)
Q Consensus 188 d~a~~~ 193 (434)
+.....
T Consensus 81 ~~~~n~ 86 (140)
T 3fwz_A 81 NGYEAG 86 (140)
T ss_dssp CHHHHH
T ss_pred ChHHHH
Confidence 877654
No 161
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.08 E-value=8.9e-06 Score=79.44 Aligned_cols=86 Identities=15% Similarity=0.156 Sum_probs=61.9
Q ss_pred CEEEEEcccchHHHH-HHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQ-AQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~-A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavp 187 (434)
.||||||+|.||..+ +..|++. +++++. .++..++..+.+.+.|... ...+.+++++ +.|+|++++|
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~------~~~~vav~d~~~~~~~~~~~~~g~~~---~~~~~~~~l~~~~~D~V~i~tp 71 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT------GGEVVSMMSTSAERGAAYATENGIGK---SVTSVEELVGDPDVDAVYVSTT 71 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT------TCEEEEEECSCHHHHHHHHHHTTCSC---CBSCHHHHHTCTTCCEEEECSC
T ss_pred CeEEEEcccHHHHHhhhHHhhcC------CCeEEEEECCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 379999999999998 8888775 777653 4444334445566667631 1568889886 5999999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEE
Q 013877 188 DAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
+..+.++.... |+.|+.|.
T Consensus 72 ~~~h~~~~~~a---l~~Gk~v~ 90 (332)
T 2glx_A 72 NELHREQTLAA---IRAGKHVL 90 (332)
T ss_dssp GGGHHHHHHHH---HHTTCEEE
T ss_pred hhHhHHHHHHH---HHCCCeEE
Confidence 99998877654 34566443
No 162
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.07 E-value=3.7e-06 Score=83.46 Aligned_cols=90 Identities=16% Similarity=0.221 Sum_probs=66.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHH----cCccccCCCcCCHHhhhccCCEEEEee
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA----AGFTEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~----~G~~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
++|+|||+|.||.++++.|+... ++ +|.+++|. +..+.+.+ .|+... .+ +.++++++||+|++||
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~-----~~~~V~v~~r~--~a~~la~~l~~~~g~~~~--~~-~~~eav~~aDIVi~aT 191 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARF-----ALEAILVHDPY--ASPEILERIGRRCGVPAR--MA-APADIAAQADIVVTAT 191 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS-----CCCEEEEECTT--CCHHHHHHHHHHHTSCEE--EC-CHHHHHHHCSEEEECC
T ss_pred cEEEEECccHHHHHHHHHHHHhC-----CCcEEEEECCc--HHHHHHHHHHHhcCCeEE--Ee-CHHHHHhhCCEEEEcc
Confidence 89999999999999999998741 33 77778877 44555443 365321 14 8999999999999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEEEEeccch
Q 013877 187 SDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL~~s~G~~ 215 (434)
|... .++. .+.++||++|+....+.
T Consensus 192 ~s~~--pvl~--~~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 192 RSTT--PLFA--GQALRAGAFVGAIGSSL 216 (313)
T ss_dssp CCSS--CSSC--GGGCCTTCEEEECCCSS
T ss_pred CCCC--cccC--HHHcCCCcEEEECCCCC
Confidence 9752 2332 35689999888776654
No 163
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.07 E-value=6.8e-06 Score=80.44 Aligned_cols=87 Identities=15% Similarity=0.120 Sum_probs=60.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCCchhHHHHHHcCccccCCCcCCHHhhh-ccCCEEEEeecc
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISD 188 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~-~~ADiViLavpd 188 (434)
|.||||||+|.||..++.+|++. .+++++ +.++..++..+.+.+.|... ...+.++++ ++.|+|++++|+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-----~~~~~~~v~d~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~D~V~i~tp~ 72 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-----GEYQLVAIYSRKLETAATFASRYQNIQ---LFDQLEVFFKSSFDLVYIASPN 72 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TSEEEEEEECSSHHHHHHHGGGSSSCE---EESCHHHHHTSSCSEEEECSCG
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-----CCeEEEEEEeCCHHHHHHHHHHcCCCe---EeCCHHHHhCCCCCEEEEeCCh
Confidence 36899999999999999999875 145654 33443333334455556421 156889998 789999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEE
Q 013877 189 AAQADNYEKIFSCMKPNSIL 208 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL 208 (434)
..+.++..... +.|+-|
T Consensus 73 ~~h~~~~~~al---~~gk~V 89 (325)
T 2ho3_A 73 SLHFAQAKAAL---SAGKHV 89 (325)
T ss_dssp GGHHHHHHHHH---HTTCEE
T ss_pred HHHHHHHHHHH---HcCCcE
Confidence 99988776543 345533
No 164
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.06 E-value=7.7e-06 Score=80.85 Aligned_cols=93 Identities=22% Similarity=0.280 Sum_probs=60.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHH--cC------ccccCCCcCCHHhhhccCCE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~~~~~~~~~Ea~~~ADi 181 (434)
+||+|||.|+||.++|..|... |+ +|++.++...+....+.. .+ ... ...+ .+++++||+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~------g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i---~~~d-~~~~~~aDv 70 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK------GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANI---YAGD-YADLKGSDV 70 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEE---EECC-GGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEE---EeCC-HHHhCCCCE
Confidence 5899999999999999999998 88 887766543322222221 11 111 0234 467899999
Q ss_pred EEEeecchH----------------HHHHHHHHHhcCCCCcEE-EEeccch
Q 013877 182 VLLLISDAA----------------QADNYEKIFSCMKPNSIL-GLSHGFL 215 (434)
Q Consensus 182 ViLavpd~a----------------~~~vl~eI~~~Lk~g~iL-~~s~G~~ 215 (434)
||+++|... ..++++.|.++. |+.+| .++-+..
T Consensus 71 Viiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 71 VIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVD 120 (319)
T ss_dssp EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHH
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHH
Confidence 999999633 245666677664 55544 4444544
No 165
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.06 E-value=5e-06 Score=84.19 Aligned_cols=99 Identities=16% Similarity=0.089 Sum_probs=68.0
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-cCcccc--CCCcCCHHhhhccCCEE
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEE--NGTLGDIYETISGSDLV 182 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-~G~~~~--~~~~~~~~Ea~~~ADiV 182 (434)
..+.| ++|+|||+|.+|.+.++.++.. |.+|++.++.. ...+.+.+ .|.... .....+..+.++++|+|
T Consensus 164 ~~l~g-~~V~ViG~G~iG~~~a~~a~~~------Ga~V~~~d~~~-~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvV 235 (377)
T 2vhw_A 164 PGVEP-ADVVVIGAGTAGYNAARIANGM------GATVTVLDINI-DKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLV 235 (377)
T ss_dssp TTBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH-HHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH-HHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEE
Confidence 35788 9999999999999999999988 99887766653 33444444 454210 00012466788899999
Q ss_pred EEeecchH--HHHH-HHHHHhcCCCCcEEEEec
Q 013877 183 LLLISDAA--QADN-YEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 183 iLavpd~a--~~~v-l~eI~~~Lk~g~iL~~s~ 212 (434)
|.+++... ...+ .++..+.|++|.+|++.+
T Consensus 236 i~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 236 IGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp EECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred EECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 99885322 1122 345667899999888765
No 166
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=98.06 E-value=0.00015 Score=75.44 Aligned_cols=197 Identities=12% Similarity=0.149 Sum_probs=112.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHH-------------------HHcC-ccccCCCcC
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-------------------RAAG-FTEENGTLG 170 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A-------------------~~~G-~~~~~~~~~ 170 (434)
|.+|+|||+|-+|..+|..|.+. |++|+ |.+.+++..+.. .+.| +.. ..
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~------G~~V~-g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~----tt 89 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL------GHRVV-GYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSF----AE 89 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----CS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCcEE-EEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeE----Ec
Confidence 48999999999999999999999 99974 666655433222 2222 111 45
Q ss_pred CHHhhhccCCEEEEeecc----------hHHHHHHHHHHhcCC---CCcEEEEec----cchhh----hhhcccccCCCC
Q 013877 171 DIYETISGSDLVLLLISD----------AAQADNYEKIFSCMK---PNSILGLSH----GFLLG----HLQSMGLDFPKN 229 (434)
Q Consensus 171 ~~~Ea~~~ADiViLavpd----------~a~~~vl~eI~~~Lk---~g~iL~~s~----G~~i~----~~~~~~i~~~~d 229 (434)
+.+++++.||++|+|||. .....+.+.|.++|+ +|++|++-+ |..-. .+++ . ..+
T Consensus 90 ~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~---~-~~~ 165 (444)
T 3vtf_A 90 SAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAE---E-AGG 165 (444)
T ss_dssp SHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHT---T-TTT
T ss_pred CHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHH---h-CCC
Confidence 788999999999999873 123456667888875 567776543 44311 1111 1 123
Q ss_pred ccE-EEeccC--CChhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhcccccccch
Q 013877 230 IGV-IAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER 306 (434)
Q Consensus 230 i~V-I~v~Pn--~pg~~vr~ly~~G~~~~G~Gv~aliav~qdvsg~a~e~a~~la~aiG~~~~iettf~~E~~~Dlfge~ 306 (434)
.++ +...|. -||..+++....- -++ +.. .+.++.+.+..+...+....+ .++. .+-+.-.+-+.
T Consensus 166 ~~f~v~~~PErl~eG~a~~d~~~~~---------riV-iG~-~~~~a~~~~~~ly~~~~~~~~-~~~~-~~AE~~Kl~eN 232 (444)
T 3vtf_A 166 VKFSVASNPEFLREGSALEDFFKPD---------RIV-IGA-GDERAASFLLDVYKAVDAPKL-VMKP-REAELVKYASN 232 (444)
T ss_dssp CCCEEEECCCCCCTTSHHHHHHSCS---------CEE-EEE-SSHHHHHHHHHHTTTSCSCEE-EECH-HHHHHHHHHHH
T ss_pred CCceeecCcccccCCccccccccCC---------cEE-EcC-CCHHHHHHHHHHHhccCCCEE-Eech-hHHHHHHHHHH
Confidence 332 445663 4566665555432 111 121 245677777788777765422 2221 11112122222
Q ss_pred hhhhchHHHHHHHHHHHHHHcCCCHHHHHH
Q 013877 307 GILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (434)
Q Consensus 307 tvL~G~~~aliea~~~~~v~~Gl~~e~A~~ 336 (434)
+.+ ..=-+++..+...+-+.|++..+..+
T Consensus 233 ~~r-avnIa~~NEla~ice~~GiDv~eV~~ 261 (444)
T 3vtf_A 233 VFL-ALKISFANEVGLLAKRLGVDTYRVFE 261 (444)
T ss_dssp HHH-HHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 222 11113666677777777777665544
No 167
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.06 E-value=9.9e-06 Score=71.26 Aligned_cols=117 Identities=13% Similarity=0.128 Sum_probs=76.6
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeec
Q 013877 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~----G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavp 187 (434)
++|+|||. |++|..++++|++. |++|+ .... .+..+ .-.|... ..++.|+.+..|++++++|
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~------G~~v~-~vnp-~~~~~--~i~G~~~----~~sl~el~~~vDlavi~vp 79 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ------GYRVL-PVNP-RFQGE--ELFGEEA----VASLLDLKEPVDILDVFRP 79 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT------TCEEE-EECG-GGTTS--EETTEEC----BSSGGGCCSCCSEEEECSC
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHC------CCEEE-EeCC-CcccC--cCCCEEe----cCCHHHCCCCCCEEEEEeC
Confidence 89999999 89999999999999 99743 3222 21000 1146653 4578888888999999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCCCCccEEEeccCCChhhHHHHH
Q 013877 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly 248 (434)
+....++++++...-- +.++.. .|+.-..+.+ ..-..++.++ .||+++-...+..
T Consensus 80 ~~~~~~v~~~~~~~gi-~~i~~~-~g~~~~~~~~--~a~~~Gir~v--gpnc~g~~~~~~~ 134 (140)
T 1iuk_A 80 PSALMDHLPEVLALRP-GLVWLQ-SGIRHPEFEK--ALKEAGIPVV--ADRCLMVEHKRLF 134 (140)
T ss_dssp HHHHTTTHHHHHHHCC-SCEEEC-TTCCCHHHHH--HHHHTTCCEE--ESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CEEEEc-CCcCHHHHHH--HHHHcCCEEE--cCCccceEChhhc
Confidence 9988899988665432 345544 5542111111 0112355655 5999998765544
No 168
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.05 E-value=6.6e-06 Score=81.58 Aligned_cols=86 Identities=10% Similarity=0.123 Sum_probs=62.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhh--ccCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETI--SGSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~--~~ADiViLavpd 188 (434)
.||||||+|.||..++.+|++. .+++++. .++...+..+.+.+.|+.. ..+.+|++ .+.|+|++++|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~~l~~~~~D~V~i~tp~ 76 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKS-----EKLKLVTCYSRTEDKREKFGKRYNCAG----DATMEALLAREDVEMVIITVPN 76 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEECSSHHHHHHHHHHHTCCC----CSSHHHHHHCSSCCEEEECSCT
T ss_pred ceEEEEccCHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHhcCCCCCEEEEeCCh
Confidence 5899999999999999999865 1566553 3444344445566677764 67899999 569999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEE
Q 013877 189 AAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
..+.++..... +.|+-|.
T Consensus 77 ~~h~~~~~~al---~~gk~vl 94 (354)
T 3db2_A 77 DKHAEVIEQCA---RSGKHIY 94 (354)
T ss_dssp TSHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHHH---HcCCEEE
Confidence 99988776543 3455443
No 169
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.03 E-value=1.4e-05 Score=79.71 Aligned_cols=86 Identities=12% Similarity=0.144 Sum_probs=64.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecch
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd~ 189 (434)
.||||||+|.||..++.+|++. .+++++...+.+....+.+.+.|+.. ..+.+++++ +.|+|++|+|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~a~~~g~~~----~~~~~~ll~~~~~D~V~i~tp~~ 76 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAA-----DNLEVHGVFDILAEKREAAAQKGLKI----YESYEAVLADEKVDAVLIATPND 76 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-----TTEEEEEEECSSHHHHHHHHTTTCCB----CSCHHHHHHCTTCCEEEECSCGG
T ss_pred CcEEEECcCHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHhcCCce----eCCHHHHhcCCCCCEEEEcCCcH
Confidence 5799999999999999999875 15666544454454456666777754 678999987 789999999999
Q ss_pred HHHHHHHHHHhcCCCCcEEE
Q 013877 190 AQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 190 a~~~vl~eI~~~Lk~g~iL~ 209 (434)
.+.++..... +.|+-|.
T Consensus 77 ~h~~~~~~al---~aGkhVl 93 (359)
T 3e18_A 77 SHKELAISAL---EAGKHVV 93 (359)
T ss_dssp GHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHH---HCCCCEE
Confidence 9988776543 3455443
No 170
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.03 E-value=1.6e-05 Score=67.10 Aligned_cols=98 Identities=12% Similarity=0.070 Sum_probs=59.2
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHH---hh-hccCCEEE
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ET-ISGSDLVL 183 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~---Ea-~~~ADiVi 183 (434)
+++ ++|.|+|+|.+|..+++.|++. |++|++..+. ....+.+.+.|.....+...+.+ ++ ++++|+|+
T Consensus 4 ~~~-~~v~I~G~G~iG~~~a~~l~~~------g~~v~~~d~~-~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 4 IKN-KQFAVIGLGRFGGSIVKELHRM------GHEVLAVDIN-EEKVNAYASYATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp --C-CSEEEECCSHHHHHHHHHHHHT------TCCCEEEESC-HHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CcC-CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 455 8899999999999999999998 8887766654 33333333344321111122322 22 67899999
Q ss_pred Eeecch-HHHHHHHHHHhcCCCCcEEEEecc
Q 013877 184 LLISDA-AQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 184 Lavpd~-a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
+++++. .....+......+.+..++..+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 76 VAIGANIQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp ECCCSCHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred ECCCCchHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 999975 332233333444555555555544
No 171
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.01 E-value=3.7e-05 Score=68.73 Aligned_cols=93 Identities=15% Similarity=0.098 Sum_probs=60.1
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC---HHhh--hccCC
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET--ISGSD 180 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~---~~Ea--~~~AD 180 (434)
..+.+ ++|.|||+|.+|..+++.|++.- |++|++.++. ....+.+.+.|.....+...+ ..++ ++++|
T Consensus 35 ~~~~~-~~v~IiG~G~~G~~~a~~L~~~~-----g~~V~vid~~-~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad 107 (183)
T 3c85_A 35 INPGH-AQVLILGMGRIGTGAYDELRARY-----GKISLGIEIR-EEAAQQHRSEGRNVISGDATDPDFWERILDTGHVK 107 (183)
T ss_dssp BCCTT-CSEEEECCSHHHHHHHHHHHHHH-----CSCEEEEESC-HHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCC
T ss_pred cCCCC-CcEEEECCCHHHHHHHHHHHhcc-----CCeEEEEECC-HHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCC
Confidence 34567 89999999999999999998630 6777766655 444566666776421111223 2344 67899
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCC
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPN 205 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g 205 (434)
+||+++|+......+-.....+.++
T Consensus 108 ~vi~~~~~~~~~~~~~~~~~~~~~~ 132 (183)
T 3c85_A 108 LVLLAMPHHQGNQTALEQLQRRNYK 132 (183)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCChHHHHHHHHHHHHHCCC
Confidence 9999999866543333333344443
No 172
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.00 E-value=1.8e-05 Score=77.72 Aligned_cols=86 Identities=14% Similarity=0.138 Sum_probs=61.1
Q ss_pred CEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEEEEecCCc-hhHHHHHHcCc-cccCCCcCCHHhhhc--cCCEEEEee
Q 013877 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGS-RSFAEARAAGF-TEENGTLGDIYETIS--GSDLVLLLI 186 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLr-ds~~~~~~G~~Vivg~r~~~-~s~~~A~~~G~-~~~~~~~~~~~Ea~~--~ADiViLav 186 (434)
.||||||+|.||..++..|+ +. .+++++...+.+. +..+.+.+.|. .. ..+.+++++ +.|+|++++
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~-----~~~~~vav~d~~~~~~~~~a~~~g~~~~----~~~~~~~l~~~~~D~V~i~t 79 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKI-----QGVKLVAACALDSNQLEWAKNELGVETT----YTNYKDMIDTENIDAIFIVA 79 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTC-----SSEEEEEEECSCHHHHHHHHHTTCCSEE----ESCHHHHHTTSCCSEEEECS
T ss_pred ceEEEEcCCHHHHHHHHHHHhcC-----CCcEEEEEecCCHHHHHHHHHHhCCCcc----cCCHHHHhcCCCCCEEEEeC
Confidence 68999999999999999998 43 1566544334433 33345556676 32 568889886 699999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEEE
Q 013877 187 SDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
|+..+.++.... |+.|+.|.
T Consensus 80 p~~~h~~~~~~a---l~~G~~v~ 99 (346)
T 3cea_A 80 PTPFHPEMTIYA---MNAGLNVF 99 (346)
T ss_dssp CGGGHHHHHHHH---HHTTCEEE
T ss_pred ChHhHHHHHHHH---HHCCCEEE
Confidence 999998877654 34566444
No 173
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.00 E-value=1.8e-05 Score=77.22 Aligned_cols=85 Identities=15% Similarity=0.176 Sum_probs=61.0
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEE-EEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch
Q 013877 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (434)
Q Consensus 112 kkIgIIG~G~mG~A-~A~nLrds~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~ 189 (434)
.||||||+|.||.. ++..|.+. .+++++ +.++..++..+.+.+.|+.. ..+.+++..+.|+|++++|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~l~~~~D~V~i~tp~~ 76 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAA-----SDWTLQGAWSPTRAKALPICESWRIPY----ADSLSSLAASCDAVFVHSSTA 76 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSC-----SSEEEEEEECSSCTTHHHHHHHHTCCB----CSSHHHHHTTCSEEEECSCTT
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCc----cCcHHHhhcCCCEEEEeCCch
Confidence 58999999999996 88888763 156665 44555445455566667653 556777667899999999999
Q ss_pred HHHHHHHHHHhcCCCCcEE
Q 013877 190 AQADNYEKIFSCMKPNSIL 208 (434)
Q Consensus 190 a~~~vl~eI~~~Lk~g~iL 208 (434)
.+.++.... |+.|+-|
T Consensus 77 ~h~~~~~~a---l~~G~~v 92 (319)
T 1tlt_A 77 SHFDVVSTL---LNAGVHV 92 (319)
T ss_dssp HHHHHHHHH---HHTTCEE
T ss_pred hHHHHHHHH---HHcCCeE
Confidence 998877654 3356533
No 174
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.99 E-value=6e-06 Score=85.05 Aligned_cols=97 Identities=19% Similarity=0.174 Sum_probs=70.1
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccC-------------CCc-----
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-------------GTL----- 169 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~-------------~~~----- 169 (434)
+.+ .||+|||+|.+|...++.++.. |.+|++.++... ..+.+.+.|..... +..
T Consensus 188 v~~-~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~-~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~ 259 (405)
T 4dio_A 188 VPA-AKIFVMGAGVAGLQAIATARRL------GAVVSATDVRPA-AKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSG 259 (405)
T ss_dssp ECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSTT-HHHHHHHTTCEECCCCC-----------------C
T ss_pred cCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEcCCHH-HHHHHHHcCCceeecccccccccccccchhhhcch
Confidence 456 8999999999999999999988 999887766644 35666666653100 001
Q ss_pred -------CCHHhhhccCCEEEEee--cchHHHHHH-HHHHhcCCCCcEEEEec
Q 013877 170 -------GDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 170 -------~~~~Ea~~~ADiViLav--pd~a~~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
.+++++++++|+||.++ |......++ ++....||+|++|++.+
T Consensus 260 ~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 260 EYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 14678899999999885 443333333 46788899999999886
No 175
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.99 E-value=1.6e-05 Score=79.38 Aligned_cols=86 Identities=21% Similarity=0.251 Sum_probs=62.8
Q ss_pred CEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEE-EEecCCchhHHHHHHcCc--cccCCCcCCHHhhhc--cCCEEEEe
Q 013877 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVK-VGLRKGSRSFAEARAAGF--TEENGTLGDIYETIS--GSDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLr-ds~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~--~~~~~~~~~~~Ea~~--~ADiViLa 185 (434)
.||||||+|.||..++.+|+ .. .+++++ +.++..++..+.+.+.|+ .. ..+.+|+++ +.|+|+++
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~-----~~~~lvav~d~~~~~~~~~a~~~g~~~~~----~~~~~~ll~~~~~D~V~i~ 94 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTV-----SGVEVVAVCDIVAGRAQAALDKYAIEAKD----YNDYHDLINDKDVEVVIIT 94 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTC-----TTEEEEEEECSSTTHHHHHHHHHTCCCEE----ESSHHHHHHCTTCCEEEEC
T ss_pred eeEEEECCcHHHHHHHHHHHhhC-----CCcEEEEEEeCCHHHHHHHHHHhCCCCee----eCCHHHHhcCCCCCEEEEc
Confidence 58999999999999999998 42 156655 344444555566777773 32 578999987 48999999
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEE
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
+|+..+.++..... +.|+-|.
T Consensus 95 tp~~~h~~~~~~al---~aGk~Vl 115 (357)
T 3ec7_A 95 ASNEAHADVAVAAL---NANKYVF 115 (357)
T ss_dssp SCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCcHHHHHHHHHHH---HCCCCEE
Confidence 99999988776543 3455443
No 176
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.96 E-value=1.3e-05 Score=78.82 Aligned_cols=87 Identities=11% Similarity=0.093 Sum_probs=61.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd 188 (434)
.||||||+|.||..++.+|++. .+.+++ +.++..++..+.+.+.|+.. ...+.+|+++ +.|+|++++|+
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~-----~~~~~~av~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 77 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLA-----GNGEVVAVSSRTLESAQAFANKYHLPK---AYDKLEDMLADESIDVIYVATIN 77 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHH-----CSEEEEEEECSCSSTTCC---CCCCSC---EESCHHHHHTCTTCCEEEECSCG
T ss_pred eEEEEEechHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEECCCc
Confidence 5899999999999999999876 034544 34454445555666667631 1578999998 78999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEE
Q 013877 189 AAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
..+.++.... |+.|+-|.
T Consensus 78 ~~h~~~~~~a---l~aGk~Vl 95 (329)
T 3evn_A 78 QDHYKVAKAA---LLAGKHVL 95 (329)
T ss_dssp GGHHHHHHHH---HHTTCEEE
T ss_pred HHHHHHHHHH---HHCCCeEE
Confidence 9998877654 34455443
No 177
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.95 E-value=2.4e-05 Score=63.85 Aligned_cols=91 Identities=16% Similarity=0.057 Sum_probs=61.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCchhHHHHHHcCccccCCCcC---CHHhhhccCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLG---DIYETISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~---~~~Ea~~~ADiViLavp 187 (434)
++|+|||.|.||.++++.|.+. | ++|++..|..+ ..+.....|+........ +..++++++|+||.++|
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~------g~~~v~~~~r~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS------SNYSVTVADHDLA-ALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC------SSEEEEEEESCHH-HHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCHH-HHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence 8999999999999999999998 8 78877776533 344444445422111122 24567789999999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEEEec
Q 013877 188 DAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
......+++.... .|....+..
T Consensus 79 ~~~~~~~~~~~~~---~g~~~~~~~ 100 (118)
T 3ic5_A 79 FFLTPIIAKAAKA---AGAHYFDLT 100 (118)
T ss_dssp GGGHHHHHHHHHH---TTCEEECCC
T ss_pred chhhHHHHHHHHH---hCCCEEEec
Confidence 8877666655432 344444433
No 178
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.95 E-value=2.9e-05 Score=74.61 Aligned_cols=151 Identities=12% Similarity=0.080 Sum_probs=91.8
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
|+||+|+|+|.||..+++.+.+. +.+++...+.+.. ...|+.. ..++++++ ++|+||-.+.|..
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~------~~eLva~~d~~~~-----~~~gv~v----~~dl~~l~-~~DVvIDft~p~a 66 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK------GHEIVGVIENTPK-----ATTPYQQ----YQHIADVK-GADVAIDFSNPNL 66 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEECSSCC-------CCSCB----CSCTTTCT-TCSEEEECSCHHH
T ss_pred ceEEEEECcCHHHHHHHHHHHhC------CCEEEEEEecCcc-----ccCCCce----eCCHHHHh-CCCEEEEeCChHH
Confidence 47999999999999999999887 5554433454332 1367664 56778887 9999997777766
Q ss_pred HHHHHHHHHhcCCCCc-EEEEeccchhhhhhcccccCCCCccEEEeccCCChhhHH--HHHhhcccccC-CCceEEEeec
Q 013877 191 QADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVR--RLYVQGKEING-AGINSSFAVH 266 (434)
Q Consensus 191 ~~~vl~eI~~~Lk~g~-iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr--~ly~~G~~~~G-~Gv~aliav~ 266 (434)
..+.++ ++.|. +|+-+.|++-..++. ....-+.+.+ ..+||.+--+.- .+-+.--...+ .-+- ++-.|
T Consensus 67 ~~~~~~-----l~~g~~vVigTTG~s~e~~~~-l~~aa~~~~v-~~a~N~S~Gv~l~~~~~~~aa~~l~~~die-I~E~H 138 (243)
T 3qy9_A 67 LFPLLD-----EDFHLPLVVATTGEKEKLLNK-LDELSQNMPV-FFSANMSYGVHALTKILAAAVPLLDDFDIE-LTEAH 138 (243)
T ss_dssp HHHHHT-----SCCCCCEEECCCSSHHHHHHH-HHHHTTTSEE-EECSSCCHHHHHHHHHHHHHHHHTTTSEEE-EEEEE
T ss_pred HHHHHH-----HhcCCceEeCCCCCCHHHHHH-HHHHHhcCCE-EEECCccHHHHHHHHHHHHHHHhcCCCCEE-EEEcC
Confidence 665553 56665 455567886433221 1122344555 689998865411 00000000001 1122 23344
Q ss_pred C----C-CCHHHHHHHHHHHHHhCC
Q 013877 267 Q----D-VDGRATNVALGWSVALGS 286 (434)
Q Consensus 267 q----d-vsg~a~e~a~~la~aiG~ 286 (434)
. | .||.|+.++..+ ...|.
T Consensus 139 H~~K~DaPSGTA~~la~~i-~~~~~ 162 (243)
T 3qy9_A 139 HNKKVDAPSGTLEKLYDVI-VSLKE 162 (243)
T ss_dssp CTTCCSSSCHHHHHHHHHH-HHHST
T ss_pred CCCCCCCCCHHHHHHHHHH-HhcCc
Confidence 4 2 789999999998 88874
No 179
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.94 E-value=1.7e-05 Score=77.66 Aligned_cols=79 Identities=19% Similarity=0.142 Sum_probs=56.3
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhh-ccCCEEEEeecch
Q 013877 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDA 189 (434)
Q Consensus 112 kkIgIIG~G~mG~-A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~-~~ADiViLavpd~ 189 (434)
.||||||+|.||. .++.+|++. .++++++.++..++..+.+.+.|+.. ...+..+++ ++.|+|++++|+.
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~-----~~~~l~v~d~~~~~~~~~a~~~g~~~---~~~~~~~~l~~~~D~V~i~tp~~ 74 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQW-----PDIELVLCTRNPKVLGTLATRYRVSA---TCTDYRDVLQYGVDAVMIHAATD 74 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTS-----TTEEEEEECSCHHHHHHHHHHTTCCC---CCSSTTGGGGGCCSEEEECSCGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhC-----CCceEEEEeCCHHHHHHHHHHcCCCc---cccCHHHHhhcCCCEEEEECCch
Confidence 5899999999998 599998764 15676655554444445566667641 023445555 7899999999999
Q ss_pred HHHHHHHHH
Q 013877 190 AQADNYEKI 198 (434)
Q Consensus 190 a~~~vl~eI 198 (434)
.+.++..+.
T Consensus 75 ~h~~~~~~a 83 (323)
T 1xea_A 75 VHSTLAAFF 83 (323)
T ss_dssp GHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 998877654
No 180
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.94 E-value=3.2e-05 Score=71.32 Aligned_cols=94 Identities=13% Similarity=0.059 Sum_probs=62.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC---HHhh-hccCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET-ISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~---~~Ea-~~~ADiViLavp 187 (434)
|||.|||+|.+|..+|+.|.+. |++|++.++..++..+.+...|...-.+...+ ..++ ++++|+|+++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~------g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR------KYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT------TCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 5799999999999999999998 99987776654433333444554321111223 2233 678999999999
Q ss_pred chHHHHHHHHHHhcC-CCCcEEEEe
Q 013877 188 DAAQADNYEKIFSCM-KPNSILGLS 211 (434)
Q Consensus 188 d~a~~~vl~eI~~~L-k~g~iL~~s 211 (434)
+.....++..++..+ ....+++-+
T Consensus 75 ~d~~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 75 RDEVNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEECC
T ss_pred CcHHHHHHHHHHHHHcCCCeEEEEE
Confidence 988776665555543 333455544
No 181
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.93 E-value=1.7e-05 Score=78.90 Aligned_cols=85 Identities=14% Similarity=0.141 Sum_probs=63.2
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEE-EEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeec
Q 013877 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~-A~A~nLrds~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavp 187 (434)
.||||||+|.||. .++.+|++. .+++++ +.++..++..+.+.+.|+.. ..+.+|+++ +.|+|++++|
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~~ll~~~~~D~V~i~tp 98 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAE-----PLTEVTAIASRRWDRAKRFTERFGGEP----VEGYPALLERDDVDAVYVPLP 98 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHC-----TTEEEEEEEESSHHHHHHHHHHHCSEE----EESHHHHHTCTTCSEEEECCC
T ss_pred eEEEEEcCcHHHHHHHHHHHHhC-----CCeEEEEEEcCCHHHHHHHHHHcCCCC----cCCHHHHhcCCCCCEEEECCC
Confidence 5899999999998 799999875 145654 44554445556666778764 578999986 5899999999
Q ss_pred chHHHHHHHHHHhcCCCCcEE
Q 013877 188 DAAQADNYEKIFSCMKPNSIL 208 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL 208 (434)
+..+.++..... +.|+-|
T Consensus 99 ~~~h~~~~~~al---~aGk~V 116 (350)
T 3rc1_A 99 AVLHAEWIDRAL---RAGKHV 116 (350)
T ss_dssp GGGHHHHHHHHH---HTTCEE
T ss_pred cHHHHHHHHHHH---HCCCcE
Confidence 999988876543 345543
No 182
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.92 E-value=3e-05 Score=76.24 Aligned_cols=93 Identities=20% Similarity=0.153 Sum_probs=60.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHH-------c--CccccCCCcCCHHhhhccCCE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------A--GFTEENGTLGDIYETISGSDL 181 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~-------~--G~~~~~~~~~~~~Ea~~~ADi 181 (434)
+||+|||.|+||.++|..|... |+ +|++.++..++....+.+ . ..... ...+. +++++||+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~------g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~--~t~d~-~a~~~aDi 75 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD------NLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVI--GTDDY-ADISGSDV 75 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE--EESCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEE--ECCCH-HHhCCCCE
Confidence 7999999999999999999998 88 877766654332221111 0 11110 02455 78999999
Q ss_pred EEEee--------------cch--HHHHHHHHHHhcCCCCcEEE-Eeccc
Q 013877 182 VLLLI--------------SDA--AQADNYEKIFSCMKPNSILG-LSHGF 214 (434)
Q Consensus 182 ViLav--------------pd~--a~~~vl~eI~~~Lk~g~iL~-~s~G~ 214 (434)
||+++ +.. ...+++++|.++. |+++|+ .+...
T Consensus 76 Vi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~ 124 (317)
T 2ewd_A 76 VIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPL 124 (317)
T ss_dssp EEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSH
T ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChH
Confidence 99999 322 2346777787775 566554 44443
No 183
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.92 E-value=8.4e-06 Score=80.91 Aligned_cols=92 Identities=13% Similarity=0.033 Sum_probs=64.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcC---ccccCCCcCCHHhhhccCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG---FTEENGTLGDIYETISGSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G---~~~~~~~~~~~~Ea~~~ADiViLavpd 188 (434)
++|+|||+|.||.+++++|+... ...+|.+++|..++..+.+.+.+ +.. . +.+.++++ ++|+|++|||.
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~----~~~~V~v~~r~~~~a~~la~~~~~~~~~~--~-~~~~~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVF----DIGEVKAYDVREKAAKKFVSYCEDRGISA--S-VQPAEEAS-RCDVLVTTTPS 197 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS----CCCEEEEECSSHHHHHHHHHHHHHTTCCE--E-ECCHHHHT-SSSEEEECCCC
T ss_pred CEEEEEcCcHHHHHHHHHHHHhC----CccEEEEECCCHHHHHHHHHHHHhcCceE--E-ECCHHHHh-CCCEEEEeeCC
Confidence 89999999999999999998740 02367778877555555555432 211 1 45788999 99999999997
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEeccch
Q 013877 189 AAQADNYEKIFSCMKPNSILGLSHGFL 215 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~~s~G~~ 215 (434)
.. .++. ...+++|+.|.+...+.
T Consensus 198 ~~--pv~~--~~~l~~G~~V~~ig~~~ 220 (322)
T 1omo_A 198 RK--PVVK--AEWVEEGTHINAIGADG 220 (322)
T ss_dssp SS--CCBC--GGGCCTTCEEEECSCCS
T ss_pred CC--ceec--HHHcCCCeEEEECCCCC
Confidence 43 2221 25688998887665443
No 184
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.91 E-value=1.8e-05 Score=77.05 Aligned_cols=98 Identities=18% Similarity=0.165 Sum_probs=62.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHH--HcCcccc-CCC--cCCHHhhhccCCEEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAGFTEE-NGT--LGDIYETISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~--~~G~~~~-~~~--~~~~~Ea~~~ADiViL 184 (434)
+||+|||.|+||.++|..|... |+ +|.+.++...+....+. ..+.... +.. ..+..++++++|+||+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~------g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii 81 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR------GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVI 81 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEE
Confidence 7999999999999999999988 88 88766654322221122 2333110 000 1112467889999999
Q ss_pred eecchHH----------------HHHHHHHHhcCCCCcEE-EEeccchh
Q 013877 185 LISDAAQ----------------ADNYEKIFSCMKPNSIL-GLSHGFLL 216 (434)
Q Consensus 185 avpd~a~----------------~~vl~eI~~~Lk~g~iL-~~s~G~~i 216 (434)
+++.... .+++++|.++ .++++| .++.|+..
T Consensus 82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDI 129 (319)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHH
Confidence 9953321 2566677775 566655 46667754
No 185
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.88 E-value=4.2e-05 Score=76.02 Aligned_cols=90 Identities=13% Similarity=0.136 Sum_probs=62.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd 188 (434)
.||||||+|.||..++..|... .+++++. .++..++..+.+.+.|+........+.+++++ +.|+|++++|+
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~-----~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 81 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLA-----PNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPT 81 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCG
T ss_pred eEEEEECchHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCCh
Confidence 6899999999999999999874 1456543 44443444556666774100011468889886 58999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEE
Q 013877 189 AAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
..+.++.... |+.|+-|.
T Consensus 82 ~~h~~~~~~a---l~aGk~V~ 99 (362)
T 1ydw_A 82 SLHVEWAIKA---AEKGKHIL 99 (362)
T ss_dssp GGHHHHHHHH---HTTTCEEE
T ss_pred HHHHHHHHHH---HHCCCeEE
Confidence 9998877654 45566443
No 186
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.87 E-value=8.3e-06 Score=80.04 Aligned_cols=76 Identities=16% Similarity=0.160 Sum_probs=58.4
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCc---cccCCCcCCHHhhhccCCEE
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETISGSDLV 182 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~---~~~~~~~~~~~Ea~~~ADiV 182 (434)
.+++ ++|.|||.|.||.+++..|.+. |. +|++.+|..++..+.+.+.+. ... ...+..++++++|+|
T Consensus 138 ~l~~-~~vlVlGaGg~g~aia~~L~~~------G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 138 TLDG-KRILVIGAGGGARGIYFSLLST------AAERIDMANRTVEKAERLVREGDERRSAYF--SLAEAETRLAEYDII 208 (297)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECSSHHHHHHHHHHSCSSSCCEE--CHHHHHHTGGGCSEE
T ss_pred CCCC-CEEEEECcHHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHhhhccCcee--eHHHHHhhhccCCEE
Confidence 3678 9999999999999999999998 97 898888876665666666543 110 012456778899999
Q ss_pred EEeecchHH
Q 013877 183 LLLISDAAQ 191 (434)
Q Consensus 183 iLavpd~a~ 191 (434)
|.++|....
T Consensus 209 In~t~~~~~ 217 (297)
T 2egg_A 209 INTTSVGMH 217 (297)
T ss_dssp EECSCTTCS
T ss_pred EECCCCCCC
Confidence 999997654
No 187
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.86 E-value=1.8e-06 Score=83.33 Aligned_cols=90 Identities=16% Similarity=0.063 Sum_probs=61.2
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEee
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
++| +|+|||.|.||.+++..|.+. |. +|.+.+|+.++..+.+.+.+... ..+..++++++|+||.+|
T Consensus 107 ~~~--~vliiGaGg~a~ai~~~L~~~------G~~~I~v~nR~~~ka~~la~~~~~~~----~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 107 VKE--PVVVVGAGGAARAVIYALLQM------GVKDIWVVNRTIERAKALDFPVKIFS----LDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp CCS--SEEEECCSHHHHHHHHHHHHT------TCCCEEEEESCHHHHHTCCSSCEEEE----GGGHHHHHHTCSEEEECS
T ss_pred CCC--eEEEECcHHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHHcccCC----HHHHHhhhcCCCEEEECC
Confidence 355 899999999999999999998 88 88888886444333333323221 456778899999999999
Q ss_pred cchHHHH--HHHHHHhcCCCCcEEEEe
Q 013877 187 SDAAQAD--NYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 187 pd~a~~~--vl~eI~~~Lk~g~iL~~s 211 (434)
|.....+ .+. .+.++++++|++.
T Consensus 175 p~gm~p~~~~i~--~~~l~~~~~V~Di 199 (253)
T 3u62_A 175 SVGMKGEELPVS--DDSLKNLSLVYDV 199 (253)
T ss_dssp STTTTSCCCSCC--HHHHTTCSEEEEC
T ss_pred CCCCCCCCCCCC--HHHhCcCCEEEEe
Confidence 8643221 111 1235677776643
No 188
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.85 E-value=2.3e-05 Score=77.09 Aligned_cols=89 Identities=12% Similarity=0.084 Sum_probs=62.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd 188 (434)
.||||||+|.||..++.+|+.. . +.+++++. .++..++..+.+.+.|+.. ...+.+|+++ +.|+|++++|+
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~-~--~~~~~l~av~d~~~~~a~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp~ 76 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTL-P--RSEHQVVAVAARDLSRAKEFAQKHDIPK---AYGSYEELAKDPNVEVAYVGTQH 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-C--TTTEEEEEEECSSHHHHHHHHHHHTCSC---EESSHHHHHHCTTCCEEEECCCG
T ss_pred cEEEEECchHHHHHHHHHHHhC-C--CCCeEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEECCCc
Confidence 5899999999999999999864 0 01244443 3444345556667777731 1578999987 69999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEE
Q 013877 189 AAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
..+.++..+.. +.|+-|.
T Consensus 77 ~~H~~~~~~al---~~GkhVl 94 (334)
T 3ohs_X 77 PQHKAAVMLCL---AAGKAVL 94 (334)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHHH---hcCCEEE
Confidence 99988776543 3455443
No 189
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.83 E-value=1.3e-05 Score=78.11 Aligned_cols=84 Identities=12% Similarity=0.112 Sum_probs=56.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecch
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd~ 189 (434)
.||||||+|.||..++.+|++. .+++++...+.+....+.+.+. +.. ..+.+++++ ++|+|++++|+.
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~-----~~~~~v~v~d~~~~~~~~~~~~-~~~----~~~~~~~l~~~~~D~V~i~tp~~ 80 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGL-----PGAALVRLASSNPDNLALVPPG-CVI----ESDWRSVVSAPEVEAVIIATPPA 80 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHC-----TTEEEEEEEESCHHHHTTCCTT-CEE----ESSTHHHHTCTTCCEEEEESCGG
T ss_pred ceEEEECCcHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHhh-Ccc----cCCHHHHhhCCCCCEEEEeCChH
Confidence 6899999999999999999875 0456543333333222211111 222 467888885 799999999999
Q ss_pred HHHHHHHHHHhcCCCCcEE
Q 013877 190 AQADNYEKIFSCMKPNSIL 208 (434)
Q Consensus 190 a~~~vl~eI~~~Lk~g~iL 208 (434)
.+.++..+. ++.|+.|
T Consensus 81 ~h~~~~~~a---l~~Gk~v 96 (315)
T 3c1a_A 81 THAEITLAA---IASGKAV 96 (315)
T ss_dssp GHHHHHHHH---HHTTCEE
T ss_pred HHHHHHHHH---HHCCCcE
Confidence 998877654 3456533
No 190
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.83 E-value=2.1e-05 Score=80.51 Aligned_cols=98 Identities=13% Similarity=0.088 Sum_probs=68.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCc-----------------
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL----------------- 169 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~----------------- 169 (434)
.+.| ++|+|||+|.+|...++.++.. |.+|++.+++.. ..+.+.+.|.....-..
T Consensus 169 ~l~g-~~V~ViGaG~iG~~aa~~a~~~------Ga~V~v~D~~~~-~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~ 240 (401)
T 1x13_A 169 KVPP-AKVMVIGAGVAGLAAIGAANSL------GAIVRAFDTRPE-VKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDA 240 (401)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCGG-GHHHHHHTTCEECCC--------CCHHHHHHSHH
T ss_pred CcCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH-HHHHHHHcCCEEEEecccccccccccchhhccHH
Confidence 4678 9999999999999999999988 988877666543 44556667754200000
Q ss_pred ------CCHHhhhccCCEEEEe--ecchHHHHHH-HHHHhcCCCCcEEEEec
Q 013877 170 ------GDIYETISGSDLVLLL--ISDAAQADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 170 ------~~~~Ea~~~ADiViLa--vpd~a~~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
.++.++++++|+||.+ +|......++ ++....|++|.+|++.+
T Consensus 241 ~~~~~~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 241 FIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 0256788899999999 5422222333 35566799999998775
No 191
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=97.81 E-value=2.4e-05 Score=82.52 Aligned_cols=86 Identities=9% Similarity=0.175 Sum_probs=70.2
Q ss_pred hchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCCcchhhhhhhhhccchhHH-H-HHHH
Q 013877 310 LGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCM-E-ILYE 387 (434)
Q Consensus 310 ~G~~~aliea~~~~~v~~Gl~~e~A~~~~~e~l~Gli~~li~e~G~~~m~~~vssp~~~eyg~~~~~~~~p~~-~-~m~e 387 (434)
+|.-.+++.|.++.+.+.|++|.+++++++++.+.++.+++.+.|+++|+|+||++++ -|.. .+.|-+ . ..++
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~ 468 (525)
T 3fr7_A 394 AGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSLNPFMHARGVAFMVDNCSTTAR--LGSR---KWAPRFDYILTQQ 468 (525)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHTHHHHHTHHHHHHHHCHHHHHHHSCHHHH--HHHH---HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHhhhHHHHHHHhhhhhhhhhhhHHHHhhccHhhh--cccc---cchHhHHHHHHHH
Confidence 4666679999999999999999999999999999999999999999999999997665 4432 122322 1 3367
Q ss_pred HHHhccCChhHHH
Q 013877 388 CYEDVAAGSEIRS 400 (434)
Q Consensus 388 ~~~~v~~G~f~r~ 400 (434)
+|..|.+|..+++
T Consensus 469 ~~~~~~~~~~~~~ 481 (525)
T 3fr7_A 469 AFVTVDKDAPINQ 481 (525)
T ss_dssp HHHHHHTTCCCCH
T ss_pred hHHHhhcCCcchH
Confidence 9999999998764
No 192
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.80 E-value=4.4e-05 Score=77.89 Aligned_cols=75 Identities=23% Similarity=0.316 Sum_probs=58.7
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEee
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
+.| ++|+|||+|.||.++++.|+.. |. +|++.+|...+..+.+.+.|.... ...+..+++.++|+||.++
T Consensus 165 l~g-~~VlIiGaG~iG~~~a~~l~~~------G~~~V~v~~r~~~ra~~la~~~g~~~~--~~~~l~~~l~~aDvVi~at 235 (404)
T 1gpj_A 165 LHD-KTVLVVGAGEMGKTVAKSLVDR------GVRAVLVANRTYERAVELARDLGGEAV--RFDELVDHLARSDVVVSAT 235 (404)
T ss_dssp CTT-CEEEEESCCHHHHHHHHHHHHH------CCSEEEEECSSHHHHHHHHHHHTCEEC--CGGGHHHHHHTCSEEEECC
T ss_pred ccC-CEEEEEChHHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHcCCcee--cHHhHHHHhcCCCEEEEcc
Confidence 678 9999999999999999999988 98 888887765554466777775421 1246778889999999999
Q ss_pred cchHH
Q 013877 187 SDAAQ 191 (434)
Q Consensus 187 pd~a~ 191 (434)
|....
T Consensus 236 ~~~~~ 240 (404)
T 1gpj_A 236 AAPHP 240 (404)
T ss_dssp SSSSC
T ss_pred CCCCc
Confidence 86543
No 193
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.79 E-value=4.4e-05 Score=75.19 Aligned_cols=85 Identities=18% Similarity=0.239 Sum_probs=59.7
Q ss_pred ccCCCCEEEEEcccchHHHH-HHHHHhhhhhhcCCcEEE-EEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEE
Q 013877 107 AFNGINQIGVIGWGSQGPAQ-AQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLV 182 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~-A~nLrds~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiV 182 (434)
.++.|.||||||+|.||... +..+++. .+.+|+ |.++..++..+.|++.|+.. ...|.+|+++ +.|+|
T Consensus 19 ~~~~mirigiIG~G~ig~~~~~~~~~~~-----~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~~~~iDaV 90 (350)
T 4had_A 19 YFQSMLRFGIISTAKIGRDNVVPAIQDA-----ENCVVTAIASRDLTRAREMADRFSVPH---AFGSYEEMLASDVIDAV 90 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHC-----SSEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHHCSSCSEE
T ss_pred cccCccEEEEEcChHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCe---eeCCHHHHhcCCCCCEE
Confidence 35566899999999999864 5666654 145654 34444455667777888742 1578999885 47999
Q ss_pred EEeecchHHHHHHHHHH
Q 013877 183 LLLISDAAQADNYEKIF 199 (434)
Q Consensus 183 iLavpd~a~~~vl~eI~ 199 (434)
++++|+..+.++.....
T Consensus 91 ~I~tP~~~H~~~~~~al 107 (350)
T 4had_A 91 YIPLPTSQHIEWSIKAA 107 (350)
T ss_dssp EECSCGGGHHHHHHHHH
T ss_pred EEeCCCchhHHHHHHHH
Confidence 99999999998776543
No 194
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.78 E-value=3.6e-06 Score=82.40 Aligned_cols=94 Identities=13% Similarity=0.111 Sum_probs=60.8
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
.++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+. .+.. ....+..++++++|+||.+
T Consensus 114 ~l~~-k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~~a~~la~--~~~~--~~~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 114 GIED-AYILILGAGGASKGIANELYKI------VRPTLTVANRTMSRFNNWSL--NINK--INLSHAESHLDEFDIIINT 182 (277)
T ss_dssp TGGG-CCEEEECCSHHHHHHHHHHHTT------CCSCCEEECSCGGGGTTCCS--CCEE--ECHHHHHHTGGGCSEEEEC
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHH--hccc--ccHhhHHHHhcCCCEEEEC
Confidence 4678 9999999999999999999998 98 88888887555433332 2211 0123456778899999999
Q ss_pred ecchHHHHHHHHH-HhcCCCCcEEEEe
Q 013877 186 ISDAAQADNYEKI-FSCMKPNSILGLS 211 (434)
Q Consensus 186 vpd~a~~~vl~eI-~~~Lk~g~iL~~s 211 (434)
||.....++-..+ ...++++.+|++.
T Consensus 183 Tp~Gm~~~~~~~l~~~~l~~~~~V~D~ 209 (277)
T 3don_A 183 TPAGMNGNTDSVISLNRLASHTLVSDI 209 (277)
T ss_dssp CC-------CCSSCCTTCCSSCEEEES
T ss_pred ccCCCCCCCcCCCCHHHcCCCCEEEEe
Confidence 9976543321001 2346677776654
No 195
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.77 E-value=5.4e-05 Score=74.32 Aligned_cols=96 Identities=20% Similarity=0.206 Sum_probs=57.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHHc--Cccc-cCCC--cCCHHhhhccCCEEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA--GFTE-ENGT--LGDIYETISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~~--G~~~-~~~~--~~~~~Ea~~~ADiViL 184 (434)
+||+|||.|++|.++|..|... |+ +|++.++...+....+.+. +... .+.. ..+ .+++++||+||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~------g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi 73 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR------GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVIL 73 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEE
Confidence 5899999999999999999988 87 7766655433222223321 1100 0000 123 467899999999
Q ss_pred eecchHH----------------HHHHHHHHhcCCCCcEEE-Eeccch
Q 013877 185 LISDAAQ----------------ADNYEKIFSCMKPNSILG-LSHGFL 215 (434)
Q Consensus 185 avpd~a~----------------~~vl~eI~~~Lk~g~iL~-~s~G~~ 215 (434)
+++.... .+++++|.++ .|+.+|+ .+-+..
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPVD 120 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSHH
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCchH
Confidence 9964332 4555666666 5777654 444444
No 196
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.75 E-value=4.6e-05 Score=77.15 Aligned_cols=98 Identities=13% Similarity=0.115 Sum_probs=67.9
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc--CCC-------------cCC
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE--NGT-------------LGD 171 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~--~~~-------------~~~ 171 (434)
.+.| ++|+|||+|.+|.+.++.++.. |.+|++.++... ..+.+.+.|.... +.. ..+
T Consensus 169 ~l~g-~~V~ViGaG~iG~~aa~~a~~~------Ga~V~~~d~~~~-~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s 240 (384)
T 1l7d_A 169 TVPP-ARVLVFGVGVAGLQAIATAKRL------GAVVMATDVRAA-TKEQVESLGGKFITVDDEAMKTAETAGGYAKEMG 240 (384)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCST-THHHHHHTTCEECCC-------------------
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHcCCeEEeecccccccccccccchhhcC
Confidence 5688 9999999999999999999988 988777666544 3555666775420 000 000
Q ss_pred ----------HHhhhccCCEEEEee--cchHHHHHH-HHHHhcCCCCcEEEEec
Q 013877 172 ----------IYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (434)
Q Consensus 172 ----------~~Ea~~~ADiViLav--pd~a~~~vl-~eI~~~Lk~g~iL~~s~ 212 (434)
..+.++++|+||.++ |......++ ++....|++|.+|++.+
T Consensus 241 ~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 241 EEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp ----CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 567888999999998 422122232 45567799999988775
No 197
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.74 E-value=6e-05 Score=74.34 Aligned_cols=98 Identities=17% Similarity=0.146 Sum_probs=61.4
Q ss_pred cccCCCC--EEEEEcccchHHHHHHHHHhhhhhh--cCCcEEE-EEecCCchhHHHHHHcCccccCCCcCCHHhhhc--c
Q 013877 106 DAFNGIN--QIGVIGWGSQGPAQAQNLRDSLAEA--KSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--G 178 (434)
Q Consensus 106 ~~~~g~k--kIgIIG~G~mG~A~A~nLrds~~~~--~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ 178 (434)
-+++.|| ||||||+|.||..++.+++....-. -.+.+|+ |.++..++..+.+.+.|+.. ...|.+|+++ +
T Consensus 18 ~~~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~~~~ 94 (393)
T 4fb5_A 18 LYFQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEK---ATADWRALIADPE 94 (393)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSE---EESCHHHHHHCTT
T ss_pred ccccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCe---ecCCHHHHhcCCC
Confidence 4566665 7999999999999988876420000 0133544 34444556667778888742 1578999886 4
Q ss_pred CCEEEEeecchHHHHHHHHHHhcCCCCcEEE
Q 013877 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 179 ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
.|+|++|+|+..+.++....+ +.|+-|.
T Consensus 95 iDaV~IatP~~~H~~~a~~al---~aGkhVl 122 (393)
T 4fb5_A 95 VDVVSVTTPNQFHAEMAIAAL---EAGKHVW 122 (393)
T ss_dssp CCEEEECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred CcEEEECCChHHHHHHHHHHH---hcCCeEE
Confidence 799999999999998776543 3455443
No 198
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.71 E-value=0.00015 Score=71.17 Aligned_cols=84 Identities=12% Similarity=0.043 Sum_probs=61.4
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEE-EEecCCchhHHHHHHcC-ccccCCCcCCHHhhhc--cCCEEEEee
Q 013877 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAG-FTEENGTLGDIYETIS--GSDLVLLLI 186 (434)
Q Consensus 112 kkIgIIG~G~mG~-A~A~nLrds~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G-~~~~~~~~~~~~Ea~~--~ADiViLav 186 (434)
.||||||+|.+|. .++.+|+.. +++++ +.++..++..+.+.+.+ ... ..+.+++++ +.|+|++++
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~------~~~lvav~d~~~~~~~~~a~~~~~~~~----~~~~~~ll~~~~~D~V~i~t 74 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDA------GAELAGVFESDSDNRAKFTSLFPSVPF----AASAEQLITDASIDLIACAV 74 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHT------TCEEEEEECSCTTSCHHHHHHSTTCCB----CSCHHHHHTCTTCCEEEECS
T ss_pred cEEEEECCChHHHHHhhhhhcCC------CcEEEEEeCCCHHHHHHHHHhcCCCcc----cCCHHHHhhCCCCCEEEEeC
Confidence 5899999999996 678888765 77754 44555555566677764 332 578999886 689999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEE
Q 013877 187 SDAAQADNYEKIFSCMKPNSIL 208 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL 208 (434)
|+..+.++.... |+.|+-|
T Consensus 75 p~~~h~~~~~~a---l~aGkhV 93 (336)
T 2p2s_A 75 IPCDRAELALRT---LDAGKDF 93 (336)
T ss_dssp CGGGHHHHHHHH---HHTTCEE
T ss_pred ChhhHHHHHHHH---HHCCCcE
Confidence 999998777653 3456533
No 199
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.70 E-value=0.00011 Score=72.16 Aligned_cols=86 Identities=17% Similarity=0.190 Sum_probs=55.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchHH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a~ 191 (434)
.||||||+|+||..++..|++. .+++++...+.+.... ++.|+.. ....++.+. .+.|+|++|+|+..+
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~-----~~~elvav~d~~~~~~---~~~g~~~--~~~~~l~~~-~~~DvViiatp~~~h 78 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREA-----PDFEIAGIVRRNPAEV---PFELQPF--RVVSDIEQL-ESVDVALVCSPSREV 78 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECC----------CCTTS--CEESSGGGS-SSCCEEEECSCHHHH
T ss_pred CEEEEECChHHHHHHHHHHhcC-----CCCEEEEEEcCCHHHH---HHcCCCc--CCHHHHHhC-CCCCEEEECCCchhh
Confidence 5899999999999999999874 1567653344333322 2256431 113344444 789999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEe
Q 013877 192 ADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 192 ~~vl~eI~~~Lk~g~iL~~s 211 (434)
.++.... ++.|+.+++.
T Consensus 79 ~~~~~~a---l~aG~~Vi~e 95 (304)
T 3bio_A 79 ERTALEI---LKKGICTADS 95 (304)
T ss_dssp HHHHHHH---HTTTCEEEEC
T ss_pred HHHHHHH---HHcCCeEEEC
Confidence 8777654 4457666544
No 200
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.70 E-value=3.5e-05 Score=77.80 Aligned_cols=92 Identities=15% Similarity=0.107 Sum_probs=62.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCC-CcCCHHhhhccCCEEEEeecchH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG-TLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~-~~~~~~Ea~~~ADiViLavpd~a 190 (434)
++|+|||+|.||.+++..|.+. ++|.+++|+.++..+.+...+....+- ...++.++++++|+||.|+|+..
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-------~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~ 89 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFL 89 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-------CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhh
Confidence 8999999999999999999764 478888887554433333222111010 01245678899999999999887
Q ss_pred HHHHHHHHHhcCCCCcEEEEecc
Q 013877 191 QADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 191 ~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
+..+... .++.|+.+++.+.
T Consensus 90 ~~~v~~a---~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 90 GFKSIKA---AIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHH---HHHTTCCEEECCC
T ss_pred hHHHHHH---HHHhCCeEEEccC
Confidence 7766543 3456777766654
No 201
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.70 E-value=7e-05 Score=75.63 Aligned_cols=88 Identities=11% Similarity=0.033 Sum_probs=63.8
Q ss_pred CEEEEEcccc---hHHHHHHHHHhhhhhhcCC-cEEEE--EecCCchhHHHHHHcCccccCCCcCCHHhhhcc-------
Q 013877 112 NQIGVIGWGS---QGPAQAQNLRDSLAEAKSD-IVVKV--GLRKGSRSFAEARAAGFTEENGTLGDIYETISG------- 178 (434)
Q Consensus 112 kkIgIIG~G~---mG~A~A~nLrds~~~~~~G-~~Viv--g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~------- 178 (434)
.||||||+|. ||..++.+++.. + ++++. .++..++..+.+.+.|+.. .....+.+|++++
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~------~~~~lva~v~d~~~~~a~~~a~~~g~~~-~~~~~~~~~ll~~~~~~~~~ 85 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRD------NTFVLVAGAFDIDPIRGSAFGEQLGVDS-ERCYADYLSMFEQEARRADG 85 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGG------GSEEEEEEECCSSHHHHHHHHHHTTCCG-GGBCSSHHHHHHHHTTCTTC
T ss_pred ceEEEEcCCccchhHHHHHHHHhhC------CCeEEEEEEeCCCHHHHHHHHHHhCCCc-ceeeCCHHHHHhcccccCCC
Confidence 5899999999 999999998876 4 56653 3444445566677788731 0126789999875
Q ss_pred CCEEEEeecchHHHHHHHHHHhcCCCCcEEE
Q 013877 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 179 ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
.|+|++++|+..+.++...... .|+-|.
T Consensus 86 vD~V~i~tp~~~H~~~~~~al~---aGkhVl 113 (398)
T 3dty_A 86 IQAVSIATPNGTHYSITKAALE---AGLHVV 113 (398)
T ss_dssp CSEEEEESCGGGHHHHHHHHHH---TTCEEE
T ss_pred CCEEEECCCcHHHHHHHHHHHH---CCCeEE
Confidence 8999999999999887765433 455443
No 202
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.68 E-value=5.8e-05 Score=75.97 Aligned_cols=86 Identities=12% Similarity=0.127 Sum_probs=63.0
Q ss_pred CEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecC-CchhHHHHHHcCccccCCCcCCHHhhhcc--CCEEEEeec
Q 013877 112 NQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G-~mG~A~A~nLrds~~~~~~G~~Vivg~r~-~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~--ADiViLavp 187 (434)
.||||||+| .||..++.+|++. .+++++...+. .++..+.+.+.|+.. ..+.+|++++ .|+|++++|
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~ell~~~~vD~V~i~tp 73 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHH-----PDAQIVAACDPNEDVRERFGKEYGIPV----FATLAEMMQHVQMDAVYIASP 73 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHC-----TTEEEEEEECSCHHHHHHHHHHHTCCE----ESSHHHHHHHSCCSEEEECSC
T ss_pred eEEEEEeCCHHHHHHHHHHHHhC-----CCeEEEEEEeCCHHHHHHHHHHcCCCe----ECCHHHHHcCCCCCEEEEcCC
Confidence 589999999 9999999999875 15565544443 344445666778764 6789999874 899999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEE
Q 013877 188 DAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
+..+.++..... +.|+-|.
T Consensus 74 ~~~H~~~~~~al---~aGk~Vl 92 (387)
T 3moi_A 74 HQFHCEHVVQAS---EQGLHII 92 (387)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred cHHHHHHHHHHH---HCCCcee
Confidence 999988776543 3455443
No 203
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.66 E-value=6.9e-05 Score=75.38 Aligned_cols=99 Identities=14% Similarity=0.094 Sum_probs=67.1
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-cCcccc-C-CCcCCHHhhhccCCEE
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEE-N-GTLGDIYETISGSDLV 182 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-~G~~~~-~-~~~~~~~Ea~~~ADiV 182 (434)
..+++ ++|+|||.|.+|.++++.++.. |.+|++.++...+ .+.+.+ .|.... + ....+.+++++++|+|
T Consensus 162 ~~l~~-~~V~ViGaG~iG~~~a~~l~~~------Ga~V~~~d~~~~~-~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 162 PGVAP-ASVVILGGGTVGTNAAKIALGM------GAQVTILDVNHKR-LQYLDDVFGGRVITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp TBBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHHHHTTTSEEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCHHH-HHHHHHhcCceEEEecCCHHHHHHHHhCCCEE
Confidence 35788 9999999999999999999988 9988777765433 344433 443210 0 0012466788899999
Q ss_pred EEeecchH--HHH-HHHHHHhcCCCCcEEEEec
Q 013877 183 LLLISDAA--QAD-NYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 183 iLavpd~a--~~~-vl~eI~~~Lk~g~iL~~s~ 212 (434)
|.+++... ... +.++..+.|++|.+|++.+
T Consensus 234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred EECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 99998543 122 2356678899998887654
No 204
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.66 E-value=0.00021 Score=71.07 Aligned_cols=90 Identities=19% Similarity=0.108 Sum_probs=57.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHH--c-------CccccCCCcCCHHhhhccCCE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA--A-------GFTEENGTLGDIYETISGSDL 181 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~--~-------G~~~~~~~~~~~~Ea~~~ADi 181 (434)
+||+|||.|+||.++|..|... |+ +|++.++...+....+.. . .... ....+. +++++||+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~------g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i--~~t~d~-~al~~aD~ 85 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK------DLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKI--FGENNY-EYLQNSDV 85 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCE--EEESCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEE--EECCCH-HHHCCCCE
Confidence 6999999999999999999988 88 866655543322211111 0 1011 012466 78999999
Q ss_pred EEEee--cc--------------hHHHHHHHHHHhcCCCCcEEEEe
Q 013877 182 VLLLI--SD--------------AAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 182 ViLav--pd--------------~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
||+++ |. ....+++++|.++. |+.+|+++
T Consensus 86 VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~ 130 (328)
T 2hjr_A 86 VIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI 130 (328)
T ss_dssp EEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 99998 42 11334556666664 66665433
No 205
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.65 E-value=9.4e-05 Score=75.42 Aligned_cols=88 Identities=16% Similarity=0.177 Sum_probs=62.9
Q ss_pred CEEEEEcccc---hHHHHHHHHHhhhhhhcCC-cEEEE--EecCCchhHHHHHHcCccccCCCcCCHHhhhcc-------
Q 013877 112 NQIGVIGWGS---QGPAQAQNLRDSLAEAKSD-IVVKV--GLRKGSRSFAEARAAGFTEENGTLGDIYETISG------- 178 (434)
Q Consensus 112 kkIgIIG~G~---mG~A~A~nLrds~~~~~~G-~~Viv--g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~------- 178 (434)
.||||||+|. ||..++..++.. + ++++. .++..++..+.+++.|+.. .....+.+|++++
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~------~~~~lva~v~d~~~~~a~~~a~~~g~~~-~~~~~~~~~ll~~~~~~~~~ 110 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLD------DHYELVAGALSSTPEKAEASGRELGLDP-SRVYSDFKEMAIREAKLKNG 110 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHT------SCEEEEEEECCSSHHHHHHHHHHHTCCG-GGBCSCHHHHHHHHHHCTTC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhC------CCcEEEEEEeCCCHHHHHHHHHHcCCCc-ccccCCHHHHHhcccccCCC
Confidence 5899999999 999999998876 4 56543 3444445556677778731 1126789998876
Q ss_pred CCEEEEeecchHHHHHHHHHHhcCCCCcEEE
Q 013877 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 179 ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
.|+|++++|+..+.++.... |+.|+-|.
T Consensus 111 vD~V~I~tp~~~H~~~~~~a---l~aGkhVl 138 (417)
T 3v5n_A 111 IEAVAIVTPNHVHYAAAKEF---LKRGIHVI 138 (417)
T ss_dssp CSEEEECSCTTSHHHHHHHH---HTTTCEEE
T ss_pred CcEEEECCCcHHHHHHHHHH---HhCCCeEE
Confidence 89999999999998877654 44566443
No 206
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.65 E-value=0.0002 Score=70.33 Aligned_cols=72 Identities=18% Similarity=0.085 Sum_probs=46.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHH--HcCccc--cC---CCcCCHHhhhccCCEEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR--AAGFTE--EN---GTLGDIYETISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~--~~G~~~--~~---~~~~~~~Ea~~~ADiViL 184 (434)
+||+|||.|.+|.++|..|... +.|++|++.++...+....+. ..+... .. ....+.++ +++||+||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvVii 75 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEK----QLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVII 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEE
Confidence 5899999999999999999875 125788766665443322221 121100 00 01245655 899999999
Q ss_pred eecc
Q 013877 185 LISD 188 (434)
Q Consensus 185 avpd 188 (434)
++|.
T Consensus 76 av~~ 79 (310)
T 1guz_A 76 TAGL 79 (310)
T ss_dssp CCSC
T ss_pred eCCC
Confidence 9964
No 207
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.65 E-value=3.5e-05 Score=76.10 Aligned_cols=84 Identities=11% Similarity=0.181 Sum_probs=56.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
.||+|||+|+||..++++|.++ .+++++. .++..++ +.+ .|+.. ..++++++.++|+|++++|+..
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~-----~~~elvav~d~~~~~--~~~--~gv~~----~~d~~~ll~~~DvViiatp~~~ 70 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQ-----PDMDLVGIFSRRATL--DTK--TPVFD----VADVDKHADDVDVLFLCMGSAT 70 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEEESSSCC--SSS--SCEEE----GGGGGGTTTTCSEEEECSCTTT
T ss_pred CEEEEEeecHHHHHHHHHHhcC-----CCCEEEEEEcCCHHH--hhc--CCCce----eCCHHHHhcCCCEEEEcCCcHH
Confidence 5899999999999999999875 1455543 3443232 222 45442 4567777788999999999988
Q ss_pred HHHHHHHHHhcCCCCcEEEEe
Q 013877 191 QADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 191 ~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+.+.+. ..++.|..+++.
T Consensus 71 h~~~~~---~al~aG~~Vv~e 88 (320)
T 1f06_A 71 DIPEQA---PKFAQFACTVDT 88 (320)
T ss_dssp HHHHHH---HHHTTTSEEECC
T ss_pred HHHHHH---HHHHCCCEEEEC
Confidence 755443 345567765544
No 208
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.62 E-value=0.00029 Score=61.25 Aligned_cols=96 Identities=13% Similarity=0.006 Sum_probs=60.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhH---HHHHHcCccccCCCcCC---HHhh-hccCCEEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEARAAGFTEENGTLGD---IYET-ISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~---~~A~~~G~~~~~~~~~~---~~Ea-~~~ADiViL 184 (434)
++|.|+|+|.+|..+++.|.+. |++|++..+...+.. ......|+....+...+ ..++ ++++|+|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~------g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR------GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 6899999999999999999998 998877766432222 22223354321111222 2344 789999999
Q ss_pred eecchHHHHHHHHHHhcCCC-CcEEEEecc
Q 013877 185 LISDAAQADNYEKIFSCMKP-NSILGLSHG 213 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~-g~iL~~s~G 213 (434)
++++......+......+.+ ..++..+.+
T Consensus 78 ~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 78 LSDNDADNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp CSSCHHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred ecCChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 99988765555444444433 345554443
No 209
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.59 E-value=0.00012 Score=77.10 Aligned_cols=92 Identities=20% Similarity=0.210 Sum_probs=70.3
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEee
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
.|.| ++++|+|+|.+|.++|+.|+.. |.+|++.++. ......+...|+. +.+.+++++.+|+|+.++
T Consensus 262 ~L~G-KtVvVtGaGgIG~aiA~~Laa~------GA~Viv~D~~-~~~a~~Aa~~g~d-----v~~lee~~~~aDvVi~at 328 (488)
T 3ond_A 262 MIAG-KVAVVAGYGDVGKGCAAALKQA------GARVIVTEID-PICALQATMEGLQ-----VLTLEDVVSEADIFVTTT 328 (488)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCGGGTTTTCSEEEECS
T ss_pred cccC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCC-HHHHHHHHHhCCc-----cCCHHHHHHhcCEEEeCC
Confidence 4788 9999999999999999999998 9998776554 3344566667775 467889999999999887
Q ss_pred cchHHHHHH-HHHHhcCCCCcEEEEeccc
Q 013877 187 SDAAQADNY-EKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 187 pd~a~~~vl-~eI~~~Lk~g~iL~~s~G~ 214 (434)
.... ++ .+....|+++.+|+.++.+
T Consensus 329 G~~~---vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 329 GNKD---IIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp SCSC---SBCHHHHTTSCTTEEEEESSST
T ss_pred CChh---hhhHHHHHhcCCCeEEEEcCCC
Confidence 5332 22 2356789999888766543
No 210
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.59 E-value=0.00026 Score=70.49 Aligned_cols=69 Identities=13% Similarity=0.043 Sum_probs=46.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHH-------cCccccCCCcCCHHhhhccCCEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------AGFTEENGTLGDIYETISGSDLVL 183 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~-------~G~~~~~~~~~~~~Ea~~~ADiVi 183 (434)
+||+|||.|.+|.++|..|... |+ +|.+.++..++....+.. .+....-....+.++++++||+||
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~------g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi 83 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR------ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVI 83 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEE
Confidence 6999999999999999999988 88 876665554322221111 111100000257888999999999
Q ss_pred Eee
Q 013877 184 LLI 186 (434)
Q Consensus 184 Lav 186 (434)
+++
T Consensus 84 ~a~ 86 (331)
T 1pzg_A 84 VTA 86 (331)
T ss_dssp ECC
T ss_pred Ecc
Confidence 998
No 211
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.59 E-value=9.9e-05 Score=75.75 Aligned_cols=89 Identities=9% Similarity=0.112 Sum_probs=60.6
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEE-EEecCCchhHHHHHHcCccccC-CCcCCHHhhhc--cCCEEEEee
Q 013877 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEEN-GTLGDIYETIS--GSDLVLLLI 186 (434)
Q Consensus 112 kkIgIIG~G~mG~-A~A~nLrds~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~-~~~~~~~Ea~~--~ADiViLav 186 (434)
.||||||+|.||. .++.+|++. .+++++ +.++...+..+.+.+.|+...+ ....+.+++++ +.|+|++++
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iat 158 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGC-----QHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIIL 158 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTC-----SSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECS
T ss_pred eEEEEECCcHHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcC
Confidence 6899999999997 899998764 145654 3344333444556666763100 01567888887 789999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEE
Q 013877 187 SDAAQADNYEKIFSCMKPNSIL 208 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL 208 (434)
|+..+.++.... |+.|+-|
T Consensus 159 p~~~h~~~~~~a---l~aGk~V 177 (433)
T 1h6d_A 159 PNSLHAEFAIRA---FKAGKHV 177 (433)
T ss_dssp CGGGHHHHHHHH---HHTTCEE
T ss_pred CchhHHHHHHHH---HHCCCcE
Confidence 999998877654 3445533
No 212
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.59 E-value=1.9e-05 Score=77.36 Aligned_cols=78 Identities=15% Similarity=0.100 Sum_probs=56.7
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
.++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+.+.+-.. .-...+.+++.+++|+||.+
T Consensus 123 ~l~~-k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~~l~~~aDiIIna 194 (281)
T 3o8q_A 123 LLKG-ATILLIGAGGAARGVLKPLLDQ------QPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFEQLKQSYDVIINS 194 (281)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHTT------CCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGCCSCEEEEEEC
T ss_pred CccC-CEEEEECchHHHHHHHHHHHhc------CCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHHHhcCCCCEEEEc
Confidence 4678 9999999999999999999998 96 88889987666556665543200 00023455655789999999
Q ss_pred ecchHHH
Q 013877 186 ISDAAQA 192 (434)
Q Consensus 186 vpd~a~~ 192 (434)
||.....
T Consensus 195 Tp~gm~~ 201 (281)
T 3o8q_A 195 TSASLDG 201 (281)
T ss_dssp SCCCC--
T ss_pred CcCCCCC
Confidence 9987653
No 213
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.56 E-value=0.00011 Score=72.36 Aligned_cols=90 Identities=19% Similarity=0.181 Sum_probs=61.1
Q ss_pred EEEEEcccchHHHHHHHHHhhhhhh---cCCcEEE-EEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEee
Q 013877 113 QIGVIGWGSQGPAQAQNLRDSLAEA---KSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLI 186 (434)
Q Consensus 113 kIgIIG~G~mG~A~A~nLrds~~~~---~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLav 186 (434)
+|||||+|.||..++.+++.. ++. ..+.+|+ |.++..++..+.+.+.|+.. ...|.+|+++ +.|+|++++
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~---~~~d~~~ll~~~~iDaV~I~t 83 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSA-PRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWST---TETDWRTLLERDDVQLVDVCT 83 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHH-HHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESCHHHHTTCTTCSEEEECS
T ss_pred cEEEEcCCHHHHHHHHHHHhC-ccccccccCceEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeC
Confidence 789999999999999988764 110 0011443 33444445556677778742 1568999886 479999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEEE
Q 013877 187 SDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
|+..+.++..... +.|+-|.
T Consensus 84 P~~~H~~~~~~al---~aGkhVl 103 (390)
T 4h3v_A 84 PGDSHAEIAIAAL---EAGKHVL 103 (390)
T ss_dssp CGGGHHHHHHHHH---HTTCEEE
T ss_pred ChHHHHHHHHHHH---HcCCCce
Confidence 9999998776543 3455443
No 214
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.55 E-value=8.1e-05 Score=73.18 Aligned_cols=91 Identities=12% Similarity=0.214 Sum_probs=66.8
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecc
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd 188 (434)
.+|+|+|+ |.||..++++|++. |++++....+..... .-.|+.. ..+++|+.+ ..|++++++|+
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~------g~~~V~~VnP~~~g~---~i~G~~v----y~sl~el~~~~~~Dv~ii~vp~ 80 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLEC------GTKIVGGVTPGKGGQ---NVHGVPV----FDTVKEAVKETDANASVIFVPA 80 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT------TCCEEEEECTTCTTC---EETTEEE----ESSHHHHHHHHCCCEEEECCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHhC------CCeEEEEeCCCCCCc---eECCEee----eCCHHHHhhcCCCCEEEEccCH
Confidence 46788898 99999999999998 887544544321100 1146664 568889888 89999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEeccchh
Q 013877 189 AAQADNYEKIFSCMKPNSILGLSHGFLL 216 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~~s~G~~i 216 (434)
..+.+++++.... .-..+|+++.||..
T Consensus 81 ~~~~~~v~ea~~~-Gi~~vVi~t~G~~~ 107 (294)
T 2yv1_A 81 PFAKDAVFEAIDA-GIELIVVITEHIPV 107 (294)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECCSCCCH
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCH
Confidence 9999999886553 22336678889864
No 215
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.52 E-value=0.00023 Score=66.16 Aligned_cols=93 Identities=12% Similarity=0.185 Sum_probs=62.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHH---hh-hccCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ET-ISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~---Ea-~~~ADiViLavp 187 (434)
++|.|+|+|.+|..+++.|.+. |+ |++..+ ++...+.+. .|+..-.+...+.+ ++ ++++|.|+++++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~------g~-v~vid~-~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS------EV-FVLAED-ENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS------EE-EEEESC-GGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEECCChHHHHHHHHHHhC------Ce-EEEEEC-CHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 7899999999999999999988 88 665544 344455554 66432122223322 33 789999999999
Q ss_pred chHHHHHHHHHHhcCCCC-cEEEEecc
Q 013877 188 DAAQADNYEKIFSCMKPN-SILGLSHG 213 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g-~iL~~s~G 213 (434)
+......+......+.++ .++..+..
T Consensus 81 ~d~~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 81 SDSETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred CcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 886654444445556666 56666544
No 216
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.52 E-value=0.00012 Score=74.22 Aligned_cols=68 Identities=15% Similarity=0.100 Sum_probs=51.2
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc-cCCEEEEe
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLL 185 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~-~ADiViLa 185 (434)
.|+| ++|+|+|+|+||..+|+.|.+. |.+|++.++...+..+.+.+.|.. ..+.+++.. +||+++.|
T Consensus 170 ~L~G-ktV~V~G~G~VG~~~A~~L~~~------GakVvv~D~~~~~l~~~a~~~ga~-----~v~~~~ll~~~~DIvip~ 237 (364)
T 1leh_A 170 SLEG-LAVSVQGLGNVAKALCKKLNTE------GAKLVVTDVNKAAVSAAVAEEGAD-----AVAPNAIYGVTCDIFAPC 237 (364)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHCCE-----ECCGGGTTTCCCSEEEEC
T ss_pred CCCc-CEEEEECchHHHHHHHHHHHHC------CCEEEEEcCCHHHHHHHHHHcCCE-----EEChHHHhccCCcEeecc
Confidence 6889 9999999999999999999998 999886665444434455555654 234455544 89999977
Q ss_pred e
Q 013877 186 I 186 (434)
Q Consensus 186 v 186 (434)
.
T Consensus 238 a 238 (364)
T 1leh_A 238 A 238 (364)
T ss_dssp S
T ss_pred c
Confidence 4
No 217
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.50 E-value=0.00013 Score=71.88 Aligned_cols=91 Identities=13% Similarity=0.241 Sum_probs=66.1
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc--c-CCEEEEeec
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--G-SDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~-ADiViLavp 187 (434)
.+|.|+|. |.||..++++|++. |++++....+...-. .-.|+.. ..+++|+.+ . .|++++++|
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~------g~~~v~~VnP~~~g~---~i~G~~v----y~sl~el~~~~~~~DvaIi~vp 80 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEY------GTKVVAGVTPGKGGS---EVHGVPV----YDSVKEALAEHPEINTSIVFVP 80 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTTC---EETTEEE----ESSHHHHHHHCTTCCEEEECCC
T ss_pred CEEEEECCCCCHHHHHHHHHHhC------CCcEEEEeCCCCCCc---eECCEee----eCCHHHHhhcCCCCCEEEEecC
Confidence 46778898 99999999999998 888544554321100 1146664 567888877 5 999999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEEEeccchh
Q 013877 188 DAAQADNYEKIFSCMKPNSILGLSHGFLL 216 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~~s~G~~i 216 (434)
+..+.+++++.... .-..+|+++.||..
T Consensus 81 ~~~~~~~v~ea~~~-Gi~~vVi~t~G~~~ 108 (297)
T 2yv2_A 81 APFAPDAVYEAVDA-GIRLVVVITEGIPV 108 (297)
T ss_dssp GGGHHHHHHHHHHT-TCSEEEECCCCCCH
T ss_pred HHHHHHHHHHHHHC-CCCEEEEECCCCCH
Confidence 99999999886553 22336678889864
No 218
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.49 E-value=3.5e-05 Score=74.36 Aligned_cols=78 Identities=14% Similarity=-0.008 Sum_probs=53.4
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc-cCCEEEEe
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLL 185 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~-~ADiViLa 185 (434)
.+++ ++|.|||.|.||.+++..|.+. |.+|++.+|+.++..+.+.+.+... .-...+.+++.+ ++|+||.+
T Consensus 116 ~~~~-~~vlvlGaGg~g~a~a~~L~~~------G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~~~~~~~~~~~~DivIn~ 187 (272)
T 1p77_A 116 LRPN-QHVLILGAGGATKGVLLPLLQA------QQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSIPLQTYDLVINA 187 (272)
T ss_dssp CCTT-CEEEEECCSHHHHTTHHHHHHT------TCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGCCCSCCSEEEEC
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHccccC-CeEEeeHHHhccCCCCEEEEC
Confidence 4678 9999999999999999999998 8889999887665555554432200 000123344434 89999999
Q ss_pred ecchHHH
Q 013877 186 ISDAAQA 192 (434)
Q Consensus 186 vpd~a~~ 192 (434)
+|.....
T Consensus 188 t~~~~~~ 194 (272)
T 1p77_A 188 TSAGLSG 194 (272)
T ss_dssp CCC----
T ss_pred CCCCCCC
Confidence 9987654
No 219
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.49 E-value=0.00021 Score=70.19 Aligned_cols=86 Identities=8% Similarity=0.046 Sum_probs=59.3
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc-CccccCCCcCCHHhhh----------cc
Q 013877 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETI----------SG 178 (434)
Q Consensus 111 ~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~~~~~~~~~Ea~----------~~ 178 (434)
|.||||||+ |.+|..++..|++. +.+++...+.+......++.. +... ..+.++++ .+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~l~~~~~~ 72 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV------GGVLVASLDPATNVGLVDSFFPEAEF----FTEPEAFEAYLEDLRDRGEG 72 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT------TCEEEEEECSSCCCGGGGGTCTTCEE----ESCHHHHHHHHHHHHHTTCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhC------CCEEEEEEcCCHHHHHHHhhCCCCce----eCCHHHHHHHhhhhcccCCC
Confidence 579999999 78999999999987 776654444433322222222 2222 56778776 67
Q ss_pred CCEEEEeecchHHHHHHHHHHhcCCCCcEEE
Q 013877 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 179 ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
.|+|++++|+..+.++..... +.|+-|.
T Consensus 73 vD~V~I~tP~~~H~~~~~~al---~aGkhVl 100 (312)
T 3o9z_A 73 VDYLSIASPNHLHYPQIRMAL---RLGANAL 100 (312)
T ss_dssp CSEEEECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred CcEEEECCCchhhHHHHHHHH---HCCCeEE
Confidence 899999999999988776543 3455443
No 220
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.49 E-value=0.00017 Score=72.79 Aligned_cols=92 Identities=17% Similarity=0.145 Sum_probs=62.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhh---hhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEe
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLA---EAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~---~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLa 185 (434)
.||||||+|.||..++.++++.-. +...+.+|+. .++..++..+.+++.|+.. ...|.+|+++ +.|+|+++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~---~y~d~~~ll~~~~vD~V~I~ 103 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEK---AYGDWRELVNDPQVDVVDIT 103 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHHCTTCCEEEEC
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCe---EECCHHHHhcCCCCCEEEEC
Confidence 379999999999999999987500 0001234443 3444445556677778742 1578999886 57999999
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEE
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
+|+..+.++..... +.|+-|.
T Consensus 104 tp~~~H~~~~~~al---~aGkhVl 124 (412)
T 4gqa_A 104 SPNHLHYTMAMAAI---AAGKHVY 124 (412)
T ss_dssp SCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCcHHHHHHHHHHH---HcCCCeE
Confidence 99999998776543 3455443
No 221
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.49 E-value=0.00027 Score=70.31 Aligned_cols=94 Identities=16% Similarity=0.173 Sum_probs=61.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CchhHHHHHHcCcccc------------C--CCcCCHHhhh
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEE------------N--GTLGDIYETI 176 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~-~~~s~~~A~~~G~~~~------------~--~~~~~~~Ea~ 176 (434)
.||||||+|.||..+++.|.+. .+++++...+. .......++.+|+..- + ....+.++++
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~-----~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~ 77 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQ-----DDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL 77 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcC-----CCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhc
Confidence 5899999999999999999865 13555433333 3333455556664210 0 0124678888
Q ss_pred ccCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 177 ~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
.+.|+|++|+|...+.+.... +++.|+.|++.+.
T Consensus 78 ~~vDvV~~aTp~~~h~~~a~~---~l~aGk~Vi~sap 111 (334)
T 2czc_A 78 EKVDIIVDATPGGIGAKNKPL---YEKAGVKAIFQGG 111 (334)
T ss_dssp TTCSEEEECCSTTHHHHHHHH---HHHHTCEEEECTT
T ss_pred cCCCEEEECCCccccHHHHHH---HHHcCCceEeecc
Confidence 899999999999988776653 3344665555543
No 222
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.48 E-value=0.00021 Score=70.62 Aligned_cols=87 Identities=16% Similarity=0.163 Sum_probs=61.2
Q ss_pred CEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeec
Q 013877 112 NQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G-~mG~A~A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavp 187 (434)
.||||||+| .+|..++..|++. +.+++++. .++..++..+.+.+.|... .+.|.+|+++ +.|+|++++|
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp 91 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNL----SHLFEITAVTSRTRSHAEEFAKMVGNPA---VFDSYEELLESGLVDAVDLTLP 91 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTT----TTTEEEEEEECSSHHHHHHHHHHHSSCE---EESCHHHHHHSSCCSEEEECCC
T ss_pred eeEEEEecCHHHHHHHHHHHHhC----CCceEEEEEEcCCHHHHHHHHHHhCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 589999999 8999999999864 11456543 3444344445566677621 1578999886 5899999999
Q ss_pred chHHHHHHHHHHhcCCCCcEE
Q 013877 188 DAAQADNYEKIFSCMKPNSIL 208 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL 208 (434)
+..+.++..... +.|+-|
T Consensus 92 ~~~H~~~~~~al---~aGkhV 109 (340)
T 1zh8_A 92 VELNLPFIEKAL---RKGVHV 109 (340)
T ss_dssp GGGHHHHHHHHH---HTTCEE
T ss_pred chHHHHHHHHHH---HCCCcE
Confidence 999988776543 345544
No 223
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.47 E-value=7.7e-05 Score=72.61 Aligned_cols=92 Identities=10% Similarity=0.053 Sum_probs=63.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCc---cccCCCcCCHHhhh-ccCCE
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETI-SGSDL 181 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~---~~~~~~~~~~~Ea~-~~ADi 181 (434)
.++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+.+.+. . ..+.+++. .++|+
T Consensus 117 ~l~~-k~~lvlGaGg~~~aia~~L~~~------G~~~v~i~~R~~~~a~~la~~~~~~~~~-----~~~~~~l~~~~~Di 184 (272)
T 3pwz_A 117 PLRN-RRVLLLGAGGAVRGALLPFLQA------GPSELVIANRDMAKALALRNELDHSRLR-----ISRYEALEGQSFDI 184 (272)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------CCSEEEEECSCHHHHHHHHHHHCCTTEE-----EECSGGGTTCCCSE
T ss_pred CccC-CEEEEECccHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHHhccCCee-----EeeHHHhcccCCCE
Confidence 4678 9999999999999999999998 96 888888876666666665442 2 12333332 78999
Q ss_pred EEEeecchHHHHHHHHH-HhcCCCCcEEEEe
Q 013877 182 VLLLISDAAQADNYEKI-FSCMKPNSILGLS 211 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI-~~~Lk~g~iL~~s 211 (434)
||.+||.....+.- .+ ...++++.+|++.
T Consensus 185 vInaTp~gm~~~~~-~i~~~~l~~~~~V~Dl 214 (272)
T 3pwz_A 185 VVNATSASLTADLP-PLPADVLGEAALAYEL 214 (272)
T ss_dssp EEECSSGGGGTCCC-CCCGGGGTTCSEEEES
T ss_pred EEECCCCCCCCCCC-CCCHHHhCcCCEEEEe
Confidence 99999976542110 00 1235566665544
No 224
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.46 E-value=0.00023 Score=69.97 Aligned_cols=86 Identities=8% Similarity=0.037 Sum_probs=59.0
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc-CccccCCCcCCHHhhh-----------c
Q 013877 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETI-----------S 177 (434)
Q Consensus 111 ~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~~~~~~~~~Ea~-----------~ 177 (434)
|.||||||+ |.||..++.+|++. +.+++...+.+......+... +... ..+.++++ +
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~l~~~~~~ 72 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT------GNCLVSAYDINDSVGIIDSISPQSEF----FTEFEFFLDHASNLKRDSAT 72 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT------TCEEEEEECSSCCCGGGGGTCTTCEE----ESSHHHHHHHHHHHTTSTTT
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC------CCEEEEEEcCCHHHHHHHhhCCCCcE----ECCHHHHHHhhhhhhhccCC
Confidence 579999999 79999999999987 776654444433322222222 2222 46777776 5
Q ss_pred cCCEEEEeecchHHHHHHHHHHhcCCCCcEEE
Q 013877 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 178 ~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
+.|+|++++|+..+.++..... +.|+-|.
T Consensus 73 ~vD~V~I~tP~~~H~~~~~~al---~aGkhVl 101 (318)
T 3oa2_A 73 ALDYVSICSPNYLHYPHIAAGL---RLGCDVI 101 (318)
T ss_dssp SCCEEEECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCcEEEECCCcHHHHHHHHHHH---HCCCeEE
Confidence 7899999999999988776543 3455443
No 225
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.45 E-value=0.00027 Score=69.79 Aligned_cols=70 Identities=20% Similarity=0.186 Sum_probs=44.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHHcCccccCCC-------cCCHHhhhccCCEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGT-------LGDIYETISGSDLV 182 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~~G~~~~~~~-------~~~~~Ea~~~ADiV 182 (434)
+||+|||.|+||.++|..|+.. |+ +|++.+.. .. ...+...++...... ..+..+++++||+|
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~------~~~~ev~l~Di~-~~-~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvV 78 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ------GIADEIVLIDAN-ES-KAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLV 78 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSS-HH-HHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCC-cc-hHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEE
Confidence 7999999999999999999887 65 56544443 32 222221111100000 02345789999999
Q ss_pred EEeecch
Q 013877 183 LLLISDA 189 (434)
Q Consensus 183 iLavpd~ 189 (434)
|++++..
T Consensus 79 iia~~~~ 85 (316)
T 1ldn_A 79 VICAGAN 85 (316)
T ss_dssp EECCSCC
T ss_pred EEcCCCC
Confidence 9997643
No 226
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.45 E-value=0.00011 Score=70.83 Aligned_cols=77 Identities=22% Similarity=0.099 Sum_probs=54.8
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhh-ccCCEEEEe
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLL 185 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~-~~ADiViLa 185 (434)
.++| +++.|+|.|.||.+++..|.+. |.+|++.+|+.++..+.+.+.+... .-...+.+++. .++|+||.+
T Consensus 116 ~l~~-k~vlViGaGg~g~a~a~~L~~~------G~~V~v~~R~~~~~~~la~~~~~~~-~~~~~~~~~~~~~~~DivVn~ 187 (271)
T 1nyt_A 116 IRPG-LRILLIGAGGASRGVLLPLLSL------DCAVTITNRTVSRAEELAKLFAHTG-SIQALSMDELEGHEFDLIINA 187 (271)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSGGGTTCCCSEEEEC
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHc------CCEEEEEECCHHHHHHHHHHhhccC-CeeEecHHHhccCCCCEEEEC
Confidence 4678 9999999999999999999998 8888888887555555555543210 00022333333 589999999
Q ss_pred ecchHH
Q 013877 186 ISDAAQ 191 (434)
Q Consensus 186 vpd~a~ 191 (434)
+|....
T Consensus 188 t~~~~~ 193 (271)
T 1nyt_A 188 TSSGIS 193 (271)
T ss_dssp CSCGGG
T ss_pred CCCCCC
Confidence 997654
No 227
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.44 E-value=0.00019 Score=71.47 Aligned_cols=86 Identities=14% Similarity=0.101 Sum_probs=57.3
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCc-hhHHHHHHcCccccCCCcCCHHhhhccC--CEEEEeec
Q 013877 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGS--DLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A-~A~nLrds~~~~~~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~~~~~~~Ea~~~A--DiViLavp 187 (434)
.||||||+|.||.. ++.+|++. .+.+++...+.+. +..+.+.+.+... ...+.+|++++. |+|++++|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQM-----QDIRIVAACDSDLERARRVHRFISDIP---VLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTC-----TTEEEEEEECSSHHHHGGGGGTSCSCC---EESSHHHHHHHSCCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHHhcCCCc---ccCCHHHHhcCCCCCEEEEcCC
Confidence 58999999999985 89998765 1566653334333 3223333333221 257899998754 99999999
Q ss_pred chHHHHHHHHHHhcCCCCcEE
Q 013877 188 DAAQADNYEKIFSCMKPNSIL 208 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL 208 (434)
+..+.++..... +.|+-|
T Consensus 78 ~~~H~~~~~~al---~aGkhV 95 (359)
T 3m2t_A 78 PQLHFEMGLLAM---SKGVNV 95 (359)
T ss_dssp HHHHHHHHHHHH---HTTCEE
T ss_pred cHHHHHHHHHHH---HCCCeE
Confidence 999988776543 345544
No 228
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.42 E-value=0.00025 Score=70.20 Aligned_cols=85 Identities=14% Similarity=0.149 Sum_probs=59.0
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH---cCccccCCCcCCHHhhhcc--CCEEEEe
Q 013877 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA---AGFTEENGTLGDIYETISG--SDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~-A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~---~G~~~~~~~~~~~~Ea~~~--ADiViLa 185 (434)
.||||||+|.||. .++..|++. .+++++...+.+ +..+.+.+ .|... ..+.+|++++ .|+|+++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~-~~~~~a~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~ 72 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIR-----ETLEVKTIFDLH-VNEKAAAPFKEKGVNF----TADLNELLTDPEIELITIC 72 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECTT-CCHHHHHHHHTTTCEE----ESCTHHHHSCTTCCEEEEC
T ss_pred eEEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEECCC-HHHHHHHhhCCCCCeE----ECCHHHHhcCCCCCEEEEe
Confidence 5899999999998 577777654 156665334433 44455555 34443 5788999876 8999999
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEE
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
+|+..+.++..... +.|+-|.
T Consensus 73 tp~~~h~~~~~~al---~aGk~Vl 93 (349)
T 3i23_A 73 TPAHTHYDLAKQAI---LAGKSVI 93 (349)
T ss_dssp SCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCcHHHHHHHHHHH---HcCCEEE
Confidence 99999988776543 4555444
No 229
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.42 E-value=0.00052 Score=68.07 Aligned_cols=66 Identities=15% Similarity=0.139 Sum_probs=44.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHH--c-----C--ccccCCCcCCHHhhhccCCE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA--A-----G--FTEENGTLGDIYETISGSDL 181 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~--~-----G--~~~~~~~~~~~~Ea~~~ADi 181 (434)
+||+|||.|.||.++|..|... |+ +|++.+....+....+.. . + ... ....+. +++++||+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~------g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i--~~t~d~-~al~~aD~ 75 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK------NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKV--SGSNTY-DDLAGADV 75 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCE--EEECCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEE--EECCCH-HHhCCCCE
Confidence 7999999999999999999988 87 855544443322211111 1 1 111 012466 88999999
Q ss_pred EEEee
Q 013877 182 VLLLI 186 (434)
Q Consensus 182 ViLav 186 (434)
||+++
T Consensus 76 Vi~a~ 80 (322)
T 1t2d_A 76 VIVTA 80 (322)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99998
No 230
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.38 E-value=0.00044 Score=69.03 Aligned_cols=85 Identities=16% Similarity=0.232 Sum_probs=57.8
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc-CccccCCCcCCHHhhhc--cCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS--GSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A-~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~~~~~~~~~Ea~~--~ADiViLavp 187 (434)
.||||||+|.||.. ++..|++. .+++++...+.+.... +... +... ..+.+|+++ +.|+|++|+|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~--~~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp 76 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSV-----PGLNLAFVASRDEEKV--KRDLPDVTV----IASPEAAVQHPDVDLVVIASP 76 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECSCHHHH--HHHCTTSEE----ESCHHHHHTCTTCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHHHH--HhhCCCCcE----ECCHHHHhcCCCCCEEEEeCC
Confidence 58999999999997 77777764 1556653444433222 2233 3332 578999987 7899999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEEE
Q 013877 188 DAAQADNYEKIFSCMKPNSILGL 210 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~~ 210 (434)
+..+.++.... |+.|+-|..
T Consensus 77 ~~~H~~~~~~a---l~aGk~Vl~ 96 (364)
T 3e82_A 77 NATHAPLARLA---LNAGKHVVV 96 (364)
T ss_dssp GGGHHHHHHHH---HHTTCEEEE
T ss_pred hHHHHHHHHHH---HHCCCcEEE
Confidence 99998877654 345655443
No 231
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.37 E-value=0.00053 Score=70.31 Aligned_cols=81 Identities=14% Similarity=0.145 Sum_probs=54.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHH-HHH---HcCccccCCCcC----CHHhhhc--cCCE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFA-EAR---AAGFTEENGTLG----DIYETIS--GSDL 181 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~-~A~---~~G~~~~~~~~~----~~~Ea~~--~ADi 181 (434)
.||||||+|.||..++.+|+.. .+++++...+.+....+ .+. +.|+.. ..... +.+|+++ +.|+
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~-----~~~~lvav~d~~~~~~~~~a~~~~~~g~~~-~~~~~~~~~~~~~ll~~~~vD~ 94 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARR-----DDVEIVAFADPDPYMVGRAQEILKKNGKKP-AKVFGNGNDDYKNMLKDKNIDA 94 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSCHHHHHHHHHHHHHTTCCC-CEEECSSTTTHHHHTTCTTCCE
T ss_pred ceEEEEecCHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHHHHHhcCCCC-CceeccCCCCHHHHhcCCCCCE
Confidence 5899999999999999999864 15665444444333333 232 345310 00144 8899887 5899
Q ss_pred EEEeecchHHHHHHHHH
Q 013877 182 VLLLISDAAQADNYEKI 198 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI 198 (434)
|++++|+..+.++....
T Consensus 95 V~i~tp~~~h~~~~~~a 111 (444)
T 2ixa_A 95 VFVSSPWEWHHEHGVAA 111 (444)
T ss_dssp EEECCCGGGHHHHHHHH
T ss_pred EEEcCCcHHHHHHHHHH
Confidence 99999999998877653
No 232
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.35 E-value=0.00025 Score=66.95 Aligned_cols=80 Identities=13% Similarity=0.285 Sum_probs=52.1
Q ss_pred CEEEEEcccchHHHHHHH--HHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch
Q 013877 112 NQIGVIGWGSQGPAQAQN--LRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~n--Lrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~ 189 (434)
++|+|||+|++|.++++. .... |++++...+.++..... ...|+.+. ...++++.+++.|+|++++|+.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~------g~~iVg~~D~dp~k~g~-~i~gv~V~--~~~dl~eli~~~D~ViIAvPs~ 156 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNN------NTKISMAFDINESKIGT-EVGGVPVY--NLDDLEQHVKDESVAILTVPAV 156 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------------CCEEEEEESCTTTTTC-EETTEEEE--EGGGHHHHCSSCCEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccC------CcEEEEEEeCCHHHHHh-HhcCCeee--chhhHHHHHHhCCEEEEecCch
Confidence 689999999999999994 3333 77766555554432221 11233321 1456888887779999999998
Q ss_pred HHHHHHHHHHh
Q 013877 190 AQADNYEKIFS 200 (434)
Q Consensus 190 a~~~vl~eI~~ 200 (434)
.+.++.+.+..
T Consensus 157 ~~~ei~~~l~~ 167 (215)
T 2vt3_A 157 AAQSITDRLVA 167 (215)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 88888877654
No 233
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.35 E-value=0.00011 Score=72.47 Aligned_cols=86 Identities=12% Similarity=0.155 Sum_probs=55.9
Q ss_pred CEEEEEcccchHHH-HHHHH-HhhhhhhcCCcEEE-EEecCCchhHHHHHH-cCccccCCCcCCHHhhhcc--CCEEEEe
Q 013877 112 NQIGVIGWGSQGPA-QAQNL-RDSLAEAKSDIVVK-VGLRKGSRSFAEARA-AGFTEENGTLGDIYETISG--SDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~A-~A~nL-rds~~~~~~G~~Vi-vg~r~~~~s~~~A~~-~G~~~~~~~~~~~~Ea~~~--ADiViLa 185 (434)
.||||||+|.||.. ++.++ ... .+++++ +.++...+. +.+.+ .|... ..+.+|++++ .|+|+++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~-----~~~~l~av~d~~~~~~-~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~ 72 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRK-----DSWHVAHIFRRHAKPE-EQAPIYSHIHF----TSDLDEVLNDPDVKLVVVC 72 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCT-----TTEEEEEEECSSCCGG-GGSGGGTTCEE----ESCTHHHHTCTTEEEEEEC
T ss_pred eEEEEEecCHHHHHHHHHHHHhcC-----CCeEEEEEEcCCHhHH-HHHHhcCCCce----ECCHHHHhcCCCCCEEEEc
Confidence 68999999999986 45524 332 156665 344433333 32222 24443 5788999876 8999999
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEEE
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILGL 210 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~~ 210 (434)
+|+..+.++.... |+.|+.|..
T Consensus 73 tp~~~h~~~~~~a---l~aGk~Vl~ 94 (345)
T 3f4l_A 73 THADSHFEYAKRA---LEAGKNVLV 94 (345)
T ss_dssp SCGGGHHHHHHHH---HHTTCEEEE
T ss_pred CChHHHHHHHHHH---HHcCCcEEE
Confidence 9999998877654 345665543
No 234
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.35 E-value=0.00048 Score=68.73 Aligned_cols=86 Identities=8% Similarity=-0.005 Sum_probs=60.6
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEEEEecC-CchhHHHHHHcCccccCCCcCCHHhhhcc--CCEEEEeec
Q 013877 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~-A~A~nLrds~~~~~~G~~Vivg~r~-~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~--ADiViLavp 187 (434)
.||||||+|.+|. .++..++.. +++++...+. .++..+.+.+.|... ...+.+|++++ .|+|++++|
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~------~~~lvav~d~~~~~a~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRA------GARLAGFHEKDDALAAEFSAVYADAR---RIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHT------TCEEEEEECSCHHHHHHHHHHSSSCC---EESCHHHHHTCTTCCEEEECCC
T ss_pred cEEEEECcCHHHHHHHHHHhhcC------CcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 5899999999994 567777665 7776544444 344456666776421 15789999875 899999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEE
Q 013877 188 DAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
+..+.++..... +.|+-|.
T Consensus 98 ~~~H~~~~~~al---~aGkhVl 116 (361)
T 3u3x_A 98 SSERAELAIRAM---QHGKDVL 116 (361)
T ss_dssp HHHHHHHHHHHH---HTTCEEE
T ss_pred hHHHHHHHHHHH---HCCCeEE
Confidence 999988776543 3455443
No 235
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.34 E-value=0.00022 Score=69.57 Aligned_cols=67 Identities=19% Similarity=0.039 Sum_probs=54.3
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecch
Q 013877 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (434)
Q Consensus 110 g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~ 189 (434)
+ +++.|||.|-+|.+++..|.+. |.+|.|.+|+.++..+.+ +.|+.. .+.+++ .++|+||.+||..
T Consensus 118 ~-k~vlvlGaGGaaraia~~L~~~------G~~v~V~nRt~~ka~~la-~~~~~~-----~~~~~l-~~~DiVInaTp~G 183 (269)
T 3phh_A 118 Y-QNALILGAGGSAKALACELKKQ------GLQVSVLNRSSRGLDFFQ-RLGCDC-----FMEPPK-SAFDLIINATSAS 183 (269)
T ss_dssp C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTHHHHH-HHTCEE-----ESSCCS-SCCSEEEECCTTC
T ss_pred C-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHH-HCCCeE-----ecHHHh-ccCCEEEEcccCC
Confidence 7 9999999999999999999998 888999999877777777 666542 233343 3899999999965
Q ss_pred H
Q 013877 190 A 190 (434)
Q Consensus 190 a 190 (434)
.
T Consensus 184 m 184 (269)
T 3phh_A 184 L 184 (269)
T ss_dssp C
T ss_pred C
Confidence 3
No 236
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.31 E-value=0.0009 Score=68.69 Aligned_cols=93 Identities=14% Similarity=0.181 Sum_probs=64.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCH---Hhh-hccCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YET-ISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~---~Ea-~~~ADiViLavp 187 (434)
++|.|||+|.+|..+++.|++. |++|++.++ +....+.+++.|+..-.+...+. .++ +++||+||++++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~------g~~vvvId~-d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS------GVKMVVLDH-DPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEEC-CHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCCEEEEEC-CHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 6799999999999999999999 998876554 45557777788874322222232 233 688999999999
Q ss_pred chHHHHHHHHHHhcCCCC-cEEEEe
Q 013877 188 DAAQADNYEKIFSCMKPN-SILGLS 211 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g-~iL~~s 211 (434)
+......+-.....+.|+ .+|.-+
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 877654444444445555 455544
No 237
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.29 E-value=0.00042 Score=68.58 Aligned_cols=85 Identities=9% Similarity=0.135 Sum_probs=56.5
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhcc--CCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A-~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~--ADiViLavpd 188 (434)
.||||||+|.||.. ++..|++. .+++++...+.+....+ +...+... ..+.+|++++ .|+|++++|+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~-----~~~~l~av~d~~~~~~~-~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp~ 77 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGT-----PGLELAGVSSSDASKVH-ADWPAIPV----VSDPQMLFNDPSIDLIVIPTPN 77 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECSCHHHHH-TTCSSCCE----ESCHHHHHHCSSCCEEEECSCT
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-----CCcEEEEEECCCHHHHH-hhCCCCce----ECCHHHHhcCCCCCEEEEeCCh
Confidence 58999999999997 78888764 14565533444332221 11113332 5789999875 8999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEE
Q 013877 189 AAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
..+.++.... |+.|+-|.
T Consensus 78 ~~H~~~~~~a---l~aGkhV~ 95 (352)
T 3kux_A 78 DTHFPLAQSA---LAAGKHVV 95 (352)
T ss_dssp TTHHHHHHHH---HHTTCEEE
T ss_pred HHHHHHHHHH---HHCCCcEE
Confidence 9998877654 34555443
No 238
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.29 E-value=0.00044 Score=72.09 Aligned_cols=82 Identities=7% Similarity=0.092 Sum_probs=58.6
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEE-EecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEE
Q 013877 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLL 184 (434)
Q Consensus 112 kkIgIIG~----G~mG~A~A~nLrds~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViL 184 (434)
.||||||+ |.||..++.+|++. ..+++++. .++..++..+.+.+.|+.. .....+.+|+++ +.|+|++
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~----~~~~~lvav~d~~~~~a~~~a~~~g~~~-~~~~~d~~ell~~~~vD~V~I 114 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQL----SSQFQIVALYNPTLKSSLQTIEQLQLKH-ATGFDSLESFAQYKDIDMIVV 114 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHT----TTTEEEEEEECSCHHHHHHHHHHTTCTT-CEEESCHHHHHHCTTCSEEEE
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhc----CCCeEEEEEEeCCHHHHHHHHHHcCCCc-ceeeCCHHHHhcCCCCCEEEE
Confidence 58999999 99999999999863 01566543 3443344445666677630 011578999986 6899999
Q ss_pred eecchHHHHHHHHH
Q 013877 185 LISDAAQADNYEKI 198 (434)
Q Consensus 185 avpd~a~~~vl~eI 198 (434)
++|+..+.++....
T Consensus 115 ~tp~~~H~~~~~~a 128 (479)
T 2nvw_A 115 SVKVPEHYEVVKNI 128 (479)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHH
Confidence 99999998877654
No 239
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.27 E-value=0.0004 Score=71.31 Aligned_cols=82 Identities=13% Similarity=0.135 Sum_probs=58.1
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEE-ecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEE
Q 013877 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVG-LRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLL 184 (434)
Q Consensus 112 kkIgIIG~----G~mG~A~A~nLrds~~~~~~G~~Vivg-~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViL 184 (434)
.||||||+ |.||..++.+|++. ..+++++.. ++..++..+.+.+.|+.. .....+.+|+++ +.|+|++
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~a~~~g~~~-~~~~~~~~~ll~~~~vD~V~i 95 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQL----SSQFQITALYSPKIETSIATIQRLKLSN-ATAFPTLESFASSSTIDMIVI 95 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHT----TTTEEEEEEECSSHHHHHHHHHHTTCTT-CEEESSHHHHHHCSSCSEEEE
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhc----CCCeEEEEEEeCCHHHHHHHHHHcCCCc-ceeeCCHHHHhcCCCCCEEEE
Confidence 58999999 99999999999863 015665433 443334445566667640 001578999986 6899999
Q ss_pred eecchHHHHHHHHH
Q 013877 185 LISDAAQADNYEKI 198 (434)
Q Consensus 185 avpd~a~~~vl~eI 198 (434)
++|+..+.++....
T Consensus 96 ~tp~~~H~~~~~~a 109 (438)
T 3btv_A 96 AIQVASHYEVVMPL 109 (438)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred eCCcHHHHHHHHHH
Confidence 99999998877653
No 240
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.27 E-value=0.0015 Score=64.32 Aligned_cols=69 Identities=16% Similarity=0.151 Sum_probs=44.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHH--cCcccc--CC---CcCCHHhhhccCCEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA--AGFTEE--NG---TLGDIYETISGSDLVL 183 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~--~G~~~~--~~---~~~~~~Ea~~~ADiVi 183 (434)
+||+|||.|.||.+++..|... |+ +|.+.+....+....+.+ .+.... .. ...+. +++++||+||
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~------g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi 75 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK------ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIV 75 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEE
Confidence 6999999999999999999888 86 855444443322221221 110000 00 02455 7899999999
Q ss_pred Eeec
Q 013877 184 LLIS 187 (434)
Q Consensus 184 Lavp 187 (434)
++++
T Consensus 76 ~a~g 79 (309)
T 1ur5_A 76 VTSG 79 (309)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 9974
No 241
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.27 E-value=0.0013 Score=64.77 Aligned_cols=89 Identities=15% Similarity=0.111 Sum_probs=56.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCc---hhHHHHHHc--CccccCCCcCCHHhhhccCCEEE
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGS---RSFAEARAA--GFTEENGTLGDIYETISGSDLVL 183 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~---~s~~~A~~~--G~~~~~~~~~~~~Ea~~~ADiVi 183 (434)
++||+|||.|+||..+|..|... |+ +|.+.+.... ...+..... .+.. ..+. +++++||+||
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~------g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~----t~d~-~~l~~aD~Vi 82 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK------GIADRLVLLDLSEGTKGATMDLEIFNLPNVEI----SKDL-SASAHSKVVI 82 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECCC-----CHHHHHHHTCTTEEE----ESCG-GGGTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE----eCCH-HHHCCCCEEE
Confidence 38999999999999999999888 77 7766655432 222222211 1221 2466 7799999999
Q ss_pred Eeecch--------------H-HHHHHHHHHhcCCCCcEEEEe
Q 013877 184 LLISDA--------------A-QADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 184 Lavpd~--------------a-~~~vl~eI~~~Lk~g~iL~~s 211 (434)
++.... . ..++++++..+- |+.+|+++
T Consensus 83 ~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 124 (303)
T 2i6t_A 83 FTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVA 124 (303)
T ss_dssp ECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEEC
T ss_pred EcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEc
Confidence 997211 1 234555566654 66665443
No 242
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.25 E-value=0.00049 Score=68.42 Aligned_cols=84 Identities=11% Similarity=0.192 Sum_probs=57.8
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc-CccccCCCcCCHHhhhc--cCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS--GSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A-~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~~~~~~~~~Ea~~--~ADiViLavp 187 (434)
.||||||+|.||.. ++..|++. .+++++...+.+.. +.+.+. +... ..+.+++++ +.|+|++|+|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~--~~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp 74 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVL-----DEYQISKIMTSRTE--EVKRDFPDAEV----VHELEEITNDPAIELVIVTTP 74 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECSCHH--HHHHHCTTSEE----ESSTHHHHTCTTCCEEEECSC
T ss_pred ceEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHH--HHHhhCCCCce----ECCHHHHhcCCCCCEEEEcCC
Confidence 58999999999997 77777654 15666544444332 234444 3333 578899987 7899999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEE
Q 013877 188 DAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
+..+.++.... |+.|+-|.
T Consensus 75 ~~~H~~~~~~a---l~aGkhVl 93 (358)
T 3gdo_A 75 SGLHYEHTMAC---IQAGKHVV 93 (358)
T ss_dssp TTTHHHHHHHH---HHTTCEEE
T ss_pred cHHHHHHHHHH---HHcCCeEE
Confidence 99998877654 34455443
No 243
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.24 E-value=0.00042 Score=68.92 Aligned_cols=84 Identities=10% Similarity=0.113 Sum_probs=57.2
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc-CccccCCCcCCHHhhhcc--CCEEEEeec
Q 013877 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETISG--SDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A-~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~~~~~~~~~Ea~~~--ADiViLavp 187 (434)
.||||||+|.||.. ++..|+.. .+++++...+.+... .+.+. +... ..+.+|++++ .|+|++|+|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~--~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp 74 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTN-----PHFELYKIVERSKEL--SKERYPQASI----VRSFKELTEDPEIDLIVVNTP 74 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHC-----TTEEEEEEECSSCCG--GGTTCTTSEE----ESCSHHHHTCTTCCEEEECSC
T ss_pred eEEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHHH--HHHhCCCCce----ECCHHHHhcCCCCCEEEEeCC
Confidence 58999999999997 78777764 156664334433322 23334 3332 5788999876 899999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEE
Q 013877 188 DAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
+..+.++..... +.|+-|.
T Consensus 75 ~~~H~~~~~~al---~aGkhVl 93 (362)
T 3fhl_A 75 DNTHYEYAGMAL---EAGKNVV 93 (362)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred hHHHHHHHHHHH---HCCCeEE
Confidence 999988776543 3455443
No 244
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.20 E-value=0.00051 Score=68.57 Aligned_cols=86 Identities=12% Similarity=0.083 Sum_probs=63.4
Q ss_pred CEEEEEc-ccchHHH-HH----HHHHhhhhhhcCC-cE----------EEEEecCCchhHHHHHHcCccccCCCcCCHHh
Q 013877 112 NQIGVIG-WGSQGPA-QA----QNLRDSLAEAKSD-IV----------VKVGLRKGSRSFAEARAAGFTEENGTLGDIYE 174 (434)
Q Consensus 112 kkIgIIG-~G~mG~A-~A----~nLrds~~~~~~G-~~----------Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~E 174 (434)
.|||||| +|.||.. ++ ..+++. + .. +.+..+..++..+.+.+.|+.. ...|.+|
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~------~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~---~~~~~~~ 77 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQ------GGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIAR---WTTDLDA 77 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHH------TSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCC---EESCHHH
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhc------CceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCc---ccCCHHH
Confidence 4799999 9999998 78 778766 3 22 1256666666677777888742 1578999
Q ss_pred hhcc--CCEEEEeecchHHHHHHHHHHhcCCCCcEEE
Q 013877 175 TISG--SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 175 a~~~--ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
++++ .|+|++++|+..+.++.... |+.|+-|.
T Consensus 78 ll~~~~iD~V~i~tp~~~h~~~~~~a---l~~Gk~V~ 111 (383)
T 3oqb_A 78 ALADKNDTMFFDAATTQARPGLLTQA---INAGKHVY 111 (383)
T ss_dssp HHHCSSCCEEEECSCSSSSHHHHHHH---HTTTCEEE
T ss_pred HhcCCCCCEEEECCCchHHHHHHHHH---HHCCCeEE
Confidence 9875 89999999999998776554 45566554
No 245
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.18 E-value=0.0013 Score=65.06 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=62.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCC-ch-hHHHHHHcCccccCCCcCCHHhhh-----ccCCEEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SR-SFAEARAAGFTEENGTLGDIYETI-----SGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~-~~-s~~~A~~~G~~~~~~~~~~~~Ea~-----~~ADiViL 184 (434)
.||||||+|.+|..+++.|.+.+ .+.+++...+.+ ++ ..+.+++.|.... ..+.++++ .+.|+|++
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~----~~~elvav~d~~~~~~~~~~a~~~g~~~~---~~~~e~ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNA----KYLEMGAMVGIDAASDGLARAQRMGVTTT---YAGVEGLIKLPEFADIDFVFD 77 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC----SSEEEEEEECSCTTCHHHHHHHHTTCCEE---SSHHHHHHHSGGGGGEEEEEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhC----cCeEEEEEEeCChhhhHHHHHHHcCCCcc---cCCHHHHHhccCCCCCcEEEE
Confidence 58999999999999999995521 155554444443 33 3566777787420 23456665 35799999
Q ss_pred eecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
++|+..+.++....... ++|+.|++...
T Consensus 78 atp~~~h~~~a~~al~a-~~Gk~Vi~ekp 105 (312)
T 1nvm_B 78 ATSASAHVQNEALLRQA-KPGIRLIDLTP 105 (312)
T ss_dssp CSCHHHHHHHHHHHHHH-CTTCEEEECST
T ss_pred CCChHHHHHHHHHHHHh-CCCCEEEEcCc
Confidence 99988888777654332 34777766443
No 246
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.18 E-value=0.0015 Score=64.14 Aligned_cols=69 Identities=16% Similarity=0.129 Sum_probs=45.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHH-------cCccccCCCcCCHHhhhccCCEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA-------AGFTEENGTLGDIYETISGSDLV 182 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~-------~G~~~~~~~~~~~~Ea~~~ADiV 182 (434)
+||+|||.|++|.++|..|... |+ +|.+.++...+....+.+ .+....-....+ .+++++||+|
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~------~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiV 73 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEII 73 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEE
Confidence 5899999999999999999988 87 777666553332111111 111000000235 7899999999
Q ss_pred EEeec
Q 013877 183 LLLIS 187 (434)
Q Consensus 183 iLavp 187 (434)
|++..
T Consensus 74 Viaag 78 (294)
T 1oju_A 74 VVTAG 78 (294)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99974
No 247
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.16 E-value=0.0005 Score=67.07 Aligned_cols=160 Identities=14% Similarity=0.111 Sum_probs=94.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhH---HHHHH----cCccccCCCcCCHHhhhccCCEEE
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEARA----AGFTEENGTLGDIYETISGSDLVL 183 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~---~~A~~----~G~~~~~~~~~~~~Ea~~~ADiVi 183 (434)
.||+|+| +|.||..+++.+.+. .+++++...+...... +...- .|+.. ..+++++++++|+||
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~-----~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v----~~dl~~ll~~~DVVI 78 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAA-----PDATLVGALDRTGSPQLGQDAGAFLGKQTGVAL----TDDIERVCAEADYLI 78 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHC-----TTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBC----BCCHHHHHHHCSEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEEecCcccccccHHHHhCCCCCcee----cCCHHHHhcCCCEEE
Confidence 7999999 999999999998865 1566654444322110 00000 13332 468889999999999
Q ss_pred EeecchHHHHHHHHHHhcCCCCc-EEEEeccchhhhhhcccccCCCCccEEEeccCCChhhHH--HHHhhccccc--CCC
Q 013877 184 LLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVR--RLYVQGKEIN--GAG 258 (434)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~g~-iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr--~ly~~G~~~~--G~G 258 (434)
-+++|....+.+..... .|. +|+=+.|++-..++. ....-+.+.+ ..+||.+--+.- ++-+.-.... ++-
T Consensus 79 DfT~p~a~~~~~~~al~---~G~~vVigTTG~s~~~~~~-L~~aa~~~~v-v~a~N~s~Gv~l~~~~~~~aa~~l~~~~d 153 (272)
T 4f3y_A 79 DFTLPEGTLVHLDAALR---HDVKLVIGTTGFSEPQKAQ-LRAAGEKIAL-VFSANMSVGVNVTMKLLEFAAKQFAQGYD 153 (272)
T ss_dssp ECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHHHH-HHHHTTTSEE-EECSCCCHHHHHHHHHHHHHHHHTSSSCE
T ss_pred EcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHHHH-HHHHhccCCE-EEECCCCHHHHHHHHHHHHHHHhcCcCCC
Confidence 99999988877765443 344 444467886432221 1122234554 689998765411 0000000001 122
Q ss_pred ceEEEeecC----C-CCHHHHHHHHHHHHHhCC
Q 013877 259 INSSFAVHQ----D-VDGRATNVALGWSVALGS 286 (434)
Q Consensus 259 v~aliav~q----d-vsg~a~e~a~~la~aiG~ 286 (434)
+-- +-.|. | .||.|+.++..+....|.
T Consensus 154 iei-~E~HH~~K~DaPSGTA~~la~~i~~~~~~ 185 (272)
T 4f3y_A 154 IEI-IEAHHRHKVDAPSGTALMMGETIAAATGR 185 (272)
T ss_dssp EEE-EEEECTTCCSSSCHHHHHHHHHHHHTTTC
T ss_pred EEE-EEecCCCCCCCCCHHHHHHHHHHHHHhCc
Confidence 333 44444 2 589999999999988875
No 248
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.15 E-value=0.00028 Score=66.71 Aligned_cols=147 Identities=15% Similarity=0.218 Sum_probs=84.6
Q ss_pred cccccchhhhhhhhcccccchhhccCCcccccccc----cc--CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE
Q 013877 72 LDFETSVFKKDMISLADRDEYIVRGGRDLFNLLPD----AF--NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV 145 (434)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~f~~~~~----~~--~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Viv 145 (434)
..+++...||-+-.|+.-- .|+-++.-..+.+ .| ...++++|||+|++|.++++.+... ..|++++.
T Consensus 42 ~gv~~~qiRkDls~fg~~G---~~g~GY~V~~L~~~i~~~Lg~~~~~~V~IvGaG~lG~aLa~~~~~~----~~g~~iVg 114 (212)
T 3keo_A 42 LGIDSATVRRDFSYFGELG---RRGFGYDVKKLMNFFAEILNDHSTTNVMLVGCGNIGRALLHYRFHD----RNKMQISM 114 (212)
T ss_dssp HTSCHHHHHHHHHTTGGGT---TTSSSEEHHHHHHHHHHHTTTTSCEEEEEECCSHHHHHHTTCCCCT----TSSEEEEE
T ss_pred HCCCHHHHHHHHHHHhhcC---CCCCCEEHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHhhhcc----cCCeEEEE
Confidence 4455566666665554322 2322332222211 12 1126899999999999999874211 12777766
Q ss_pred EecCCch-hHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEeccchhhhhhcc
Q 013877 146 GLRKGSR-SFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSM 222 (434)
Q Consensus 146 g~r~~~~-s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~ 222 (434)
..|.++. ....+.-.|+.+.+ ..++++.++ +.|++++|+|.....++.+.+.+.=- ..++-|++-
T Consensus 115 ~~D~dp~~kiG~~~i~GvpV~~--~~dL~~~v~~~~Id~vIIAvPs~~aq~v~d~lv~~GI-k~I~nFap~--------- 182 (212)
T 3keo_A 115 AFDLDSNDLVGKTTEDGIPVYG--ISTINDHLIDSDIETAILTVPSTEAQEVADILVKAGI-KGILSFSPV--------- 182 (212)
T ss_dssp EEECTTSTTTTCBCTTCCBEEE--GGGHHHHC-CCSCCEEEECSCGGGHHHHHHHHHHHTC-CEEEECSSS---------
T ss_pred EEeCCchhccCceeECCeEEeC--HHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHcCC-CEEEEcCCc---------
Confidence 6665544 33221124554311 356777776 48999999999888788877654321 225666542
Q ss_pred cccCCCCccEEEecc
Q 013877 223 GLDFPKNIGVIAVCP 237 (434)
Q Consensus 223 ~i~~~~di~VI~v~P 237 (434)
.+..|+++.|-.++.
T Consensus 183 ~l~vp~~v~v~~vdl 197 (212)
T 3keo_A 183 HLTLPKDIIVQYVDL 197 (212)
T ss_dssp CCCCCTTSEEEECCH
T ss_pred ccCCCCCcEEEEeCc
Confidence 236677877766654
No 249
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.14 E-value=0.0012 Score=65.30 Aligned_cols=93 Identities=12% Similarity=0.162 Sum_probs=54.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHH--cCccccCC--CcCCHHhhhccCCEEEEe
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGFTEENG--TLGDIYETISGSDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G~~~~~~--~~~~~~Ea~~~ADiViLa 185 (434)
+||+|||.|++|.+++..|... |+ +|++.+....+....+.+ ++...... ...+..+++++||+||++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~------~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ 81 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR------QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVT 81 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEc
Confidence 6899999999999999999988 76 666555443322222322 22100000 011236789999999999
Q ss_pred ecchH----------------HHHHHHHHHhcCCCCcEEEEe
Q 013877 186 ISDAA----------------QADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 186 vpd~a----------------~~~vl~eI~~~Lk~g~iL~~s 211 (434)
++... ..++.+.|.++ .|+.+|++.
T Consensus 82 ~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (318)
T 1y6j_A 82 AGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV 122 (318)
T ss_dssp CCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred CCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 87533 12344455555 577766554
No 250
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.13 E-value=0.00065 Score=66.80 Aligned_cols=86 Identities=9% Similarity=0.007 Sum_probs=57.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc--hhH---HHHHHcCccccCCCcCCHHhhhcc--CCEEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSF---AEARAAGFTEENGTLGDIYETISG--SDLVLL 184 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~--~s~---~~A~~~G~~~~~~~~~~~~Ea~~~--ADiViL 184 (434)
.||||||+|.+|..++..| .. +++++...+.+. +.. +.+.+.|+.+ ....|.+|++++ .|+|++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~------~~~lvav~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~~vD~V~I 73 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DE------ECSITGIAPGVPEEDLSKLEKAISEMNIKP--KKYNNWWEMLEKEKPDILVI 73 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CT------TEEEEEEECSSTTCCCHHHHHHHHTTTCCC--EECSSHHHHHHHHCCSEEEE
T ss_pred eEEEEEccchhHHHHHHhc-CC------CcEEEEEecCCchhhHHHHHHHHHHcCCCC--cccCCHHHHhcCCCCCEEEE
Confidence 6899999999999888777 44 677654444332 222 2223346521 125789998864 899999
Q ss_pred eecchHHHHHHHHHHhcCCCCcEEE
Q 013877 185 LISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
++|+..+.++..... +.|+-|.
T Consensus 74 ~tp~~~H~~~~~~al---~aGkhVl 95 (337)
T 3ip3_A 74 NTVFSLNGKILLEAL---ERKIHAF 95 (337)
T ss_dssp CSSHHHHHHHHHHHH---HTTCEEE
T ss_pred eCCcchHHHHHHHHH---HCCCcEE
Confidence 999999988776543 3455443
No 251
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.12 E-value=0.00034 Score=70.94 Aligned_cols=91 Identities=10% Similarity=0.082 Sum_probs=63.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
.||+|||+| +|...+..+++. ..+++++ |..+..+++.+.|++.|+.. ..|.++++++.|+|++++|+..
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~----~~~~elvav~~~~~~~a~~~a~~~gv~~----~~~~~~l~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQP----PEGLELVGLLAQGSARSRELAHAFGIPL----YTSPEQITGMPDIACIVVRSTV 78 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSC----CTTEEEEEEECCSSHHHHHHHHHTTCCE----ESSGGGCCSCCSEEEECCC--C
T ss_pred CEEEEEehH-HHHHHHHHHHhC----CCCeEEEEEECCCHHHHHHHHHHhCCCE----ECCHHHHhcCCCEEEEECCCcc
Confidence 589999999 799888888764 1145654 34555667778899999864 6789999999999999999987
Q ss_pred H----HHHHHHHHhcCCCCcEEEEeccc
Q 013877 191 Q----ADNYEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 191 ~----~~vl~eI~~~Lk~g~iL~~s~G~ 214 (434)
+ .++.. ..|+.|+-|..=.-+
T Consensus 79 h~~~~~~~a~---~al~aGkhVl~EKPl 103 (372)
T 4gmf_A 79 AGGAGTQLAR---HFLARGVHVIQEHPL 103 (372)
T ss_dssp TTSHHHHHHH---HHHHTTCEEEEESCC
T ss_pred cchhHHHHHH---HHHHcCCcEEEecCC
Confidence 7 34433 334566655433333
No 252
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.08 E-value=0.00065 Score=66.35 Aligned_cols=77 Identities=19% Similarity=0.089 Sum_probs=56.5
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcC-----ccccCCCcCCHHhhhccCC
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG-----FTEENGTLGDIYETISGSD 180 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G-----~~~~~~~~~~~~Ea~~~AD 180 (434)
.++| +++.|+|.|-+|.+++..|.+. |. +|.+.+|..++..+.+.+.+ .........+..++++++|
T Consensus 124 ~l~~-k~vlVlGaGG~g~aia~~L~~~------G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~D 196 (283)
T 3jyo_A 124 NAKL-DSVVQVGAGGVGNAVAYALVTH------GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAAD 196 (283)
T ss_dssp TCCC-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSS
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCC
Confidence 5678 9999999999999999999998 98 78888887665555544432 1100000236778889999
Q ss_pred EEEEeecchH
Q 013877 181 LVLLLISDAA 190 (434)
Q Consensus 181 iViLavpd~a 190 (434)
+||.+||...
T Consensus 197 iVInaTp~Gm 206 (283)
T 3jyo_A 197 GVVNATPMGM 206 (283)
T ss_dssp EEEECSSTTS
T ss_pred EEEECCCCCC
Confidence 9999999644
No 253
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.08 E-value=0.0023 Score=63.77 Aligned_cols=73 Identities=19% Similarity=0.206 Sum_probs=47.0
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHH----Hc-----CccccCCCcCCHHh
Q 013877 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEAR----AA-----GFTEENGTLGDIYE 174 (434)
Q Consensus 105 ~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~----~~-----G~~~~~~~~~~~~E 174 (434)
|...+. +||+|||.|.+|.++|..|... |+ +|.+.+....+....+. .. ..... ...+. +
T Consensus 2 ~~~m~~-~kI~viGaG~vG~~~a~~l~~~------~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~--~t~d~-~ 71 (324)
T 3gvi_A 2 PGSMAR-NKIALIGSGMIGGTLAHLAGLK------ELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFT--GANDY-A 71 (324)
T ss_dssp ----CC-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE--EESSG-G
T ss_pred CCCCcC-CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEE--EeCCH-H
Confidence 344555 8999999999999999999988 77 87766665443221111 10 11110 02344 8
Q ss_pred hhccCCEEEEeec
Q 013877 175 TISGSDLVLLLIS 187 (434)
Q Consensus 175 a~~~ADiViLavp 187 (434)
++++||+||++..
T Consensus 72 a~~~aDiVIiaag 84 (324)
T 3gvi_A 72 AIEGADVVIVTAG 84 (324)
T ss_dssp GGTTCSEEEECCS
T ss_pred HHCCCCEEEEccC
Confidence 9999999999964
No 254
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.04 E-value=0.0025 Score=62.75 Aligned_cols=161 Identities=14% Similarity=0.053 Sum_probs=95.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchh---HHHHH-----HcCccccCCCcCCHHhhhccCCEE
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS---FAEAR-----AAGFTEENGTLGDIYETISGSDLV 182 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s---~~~A~-----~~G~~~~~~~~~~~~Ea~~~ADiV 182 (434)
.||+|+| +|.||..+++.+.+. .+++++...+..... .+... ..|+.. ..++++++.++|+|
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~-----~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v----~~dl~~ll~~aDVv 92 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRR-----KDVELCAVLVRKGSSFVDKDASILIGSDFLGVRI----TDDPESAFSNTEGI 92 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTC-----SSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBC----BSCHHHHTTSCSEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCCccccccchHHhhccCcCCcee----eCCHHHHhcCCCEE
Confidence 6899999 999999999998864 166765554442211 00111 124433 46889999999999
Q ss_pred EEeecchHHHHHHHHHHhcCCCCc-EEEEeccchhhhhhcccccCCCCccEEEeccCCChhhHH--HHHhhccccc--CC
Q 013877 183 LLLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVR--RLYVQGKEIN--GA 257 (434)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~g~-iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr--~ly~~G~~~~--G~ 257 (434)
|-.++|....+.+..... .|. +|+=+.|++-...+. ....-+.+.+ ..+||.+--+.- .+-+.--... ++
T Consensus 93 IDFT~p~a~~~~~~~~l~---~Gv~vViGTTG~~~e~~~~-L~~aa~~~~~-~~a~N~SiGv~ll~~l~~~aa~~l~~~~ 167 (288)
T 3ijp_A 93 LDFSQPQASVLYANYAAQ---KSLIHIIGTTGFSKTEEAQ-IADFAKYTTI-VKSGNMSLGVNLLANLVKRAAKALDDDF 167 (288)
T ss_dssp EECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHHHH-HHHHHTTSEE-EECSCCCHHHHHHHHHHHHHHHHSCTTS
T ss_pred EEcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHHHH-HHHHhCcCCE-EEECCCcHHHHHHHHHHHHHHHhcCCCC
Confidence 999999887776665433 344 444467886322211 0111234554 689998765421 0000000001 12
Q ss_pred CceEEEeecC----C-CCHHHHHHHHHHHHHhCCC
Q 013877 258 GINSSFAVHQ----D-VDGRATNVALGWSVALGSP 287 (434)
Q Consensus 258 Gv~aliav~q----d-vsg~a~e~a~~la~aiG~~ 287 (434)
-+-- +-.|. | .||.|+.++..++...|..
T Consensus 168 dieI-iE~HH~~K~DaPSGTA~~la~~i~~~~~~~ 201 (288)
T 3ijp_A 168 DIEI-YEMHHANKVDSPSGTALLLGQAAAEGRNIM 201 (288)
T ss_dssp EEEE-EEEECTTCCCSSCHHHHHHHHHHHHHTTSC
T ss_pred CEEE-EEccCCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 2332 34444 2 7899999999999988853
No 255
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.03 E-value=0.00045 Score=67.10 Aligned_cols=83 Identities=10% Similarity=0.159 Sum_probs=55.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecch
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd~ 189 (434)
.||||||+|.||..++.+|.... ...+++++...+.+. .+...|+. ..+.+|+++ +.|+|++++|+.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~--~~~~~~lvav~d~~~----~a~~~g~~-----~~~~~ell~~~~vD~V~i~tp~~ 76 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPR--SAAFLNLIGFVSRRE----LGSLDEVR-----QISLEDALRSQEIDVAYICSESS 76 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHH--HHTTEEEEEEECSSC----CCEETTEE-----BCCHHHHHHCSSEEEEEECSCGG
T ss_pred ceEEEEEEcHHHHHHHHHHhccc--cCCCEEEEEEECchH----HHHHcCCC-----CCCHHHHhcCCCCCEEEEeCCcH
Confidence 68999999999999999987520 001455442233221 12234543 368899886 679999999999
Q ss_pred HHHHHHHHHHhcCCCCcEE
Q 013877 190 AQADNYEKIFSCMKPNSIL 208 (434)
Q Consensus 190 a~~~vl~eI~~~Lk~g~iL 208 (434)
.+.++.... |+.|+-|
T Consensus 77 ~H~~~~~~a---l~aGkhV 92 (294)
T 1lc0_A 77 SHEDYIRQF---LQAGKHV 92 (294)
T ss_dssp GHHHHHHHH---HHTTCEE
T ss_pred hHHHHHHHH---HHCCCcE
Confidence 998777654 3456643
No 256
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.03 E-value=0.0007 Score=67.87 Aligned_cols=98 Identities=11% Similarity=0.053 Sum_probs=66.3
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccc---cCCCcCCHHhhhccCCEEE
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE---ENGTLGDIYETISGSDLVL 183 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~---~~~~~~~~~Ea~~~ADiVi 183 (434)
.+++ ++|.|||.|.+|.+.++.++.. |.+|++.+++..+ .+.+.+.|... .+....+..+.++++|+||
T Consensus 164 ~l~~-~~VlViGaGgvG~~aa~~a~~~------Ga~V~v~dr~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 164 GVKP-GKVVILGGGVVGTEAAKMAVGL------GAQVQIFDINVER-LSYLETLFGSRVELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp TBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCHHH-HHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEE
Confidence 3677 9999999999999999999988 9888877776443 44444443211 0000123556778999999
Q ss_pred EeecchHH--HH-HHHHHHhcCCCCcEEEEec
Q 013877 184 LLISDAAQ--AD-NYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 184 Lavpd~a~--~~-vl~eI~~~Lk~g~iL~~s~ 212 (434)
.+++.... .. +.++..+.|++|.+|++..
T Consensus 236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 99975331 11 1334557789999888664
No 257
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.00 E-value=0.001 Score=66.37 Aligned_cols=81 Identities=16% Similarity=0.223 Sum_probs=52.9
Q ss_pred ccCCC-CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccc-cCCCcCC---HHhhhccCCE
Q 013877 107 AFNGI-NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTLGD---IYETISGSDL 181 (434)
Q Consensus 107 ~~~g~-kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~-~~~~~~~---~~Ea~~~ADi 181 (434)
.++|- +||.|||+|.+|..++..|.+. ++|.++.+.. +..+.+.+..-.. .| +.+ +.++++++|+
T Consensus 11 ~~~g~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~~-~~~~~~~~~~~~~~~d--~~d~~~l~~~~~~~Dv 80 (365)
T 3abi_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNN-ENLEKVKEFATPLKVD--ASNFDKLVEVMKEFEL 80 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCH-HHHHHHTTTSEEEECC--TTCHHHHHHHHTTCSE
T ss_pred cccCCccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcCH-HHHHHHhccCCcEEEe--cCCHHHHHHHHhCCCE
Confidence 34442 5899999999999999998654 5777777653 3344443321110 01 223 4567899999
Q ss_pred EEEeecchHHHHHHHH
Q 013877 182 VLLLISDAAQADNYEK 197 (434)
Q Consensus 182 ViLavpd~a~~~vl~e 197 (434)
||.++|+..+..+.+.
T Consensus 81 Vi~~~p~~~~~~v~~~ 96 (365)
T 3abi_A 81 VIGALPGFLGFKSIKA 96 (365)
T ss_dssp EEECCCGGGHHHHHHH
T ss_pred EEEecCCcccchHHHH
Confidence 9999999987777764
No 258
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.98 E-value=0.00033 Score=70.02 Aligned_cols=95 Identities=13% Similarity=0.086 Sum_probs=64.9
Q ss_pred ccCCCCEEEEEcccch-HHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCC----c--CCHHhhhccC
Q 013877 107 AFNGINQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT----L--GDIYETISGS 179 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~m-G~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~----~--~~~~Ea~~~A 179 (434)
.++| +++.|||.|.| |..+|+.|... |..|.+.+|+..+.++.+.+.+......+ . .++++.+++|
T Consensus 174 ~l~g-k~vvVIG~G~iVG~~~A~~L~~~------gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~A 246 (320)
T 1edz_A 174 RLYG-KKCIVINRSEIVGRPLAALLAND------GATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDS 246 (320)
T ss_dssp TTTT-CEEEEECCCTTTHHHHHHHHHTT------SCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHC
T ss_pred CCCC-CEEEEECCCcchHHHHHHHHHHC------CCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccC
Confidence 6788 99999999976 99999999988 88888887764433333333332110000 1 3578999999
Q ss_pred CEEEEeecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 180 DiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
|+||.+++-... ++. ...+++|.+|++.+
T Consensus 247 DIVIsAtg~p~~--vI~--~e~vk~GavVIDVg 275 (320)
T 1edz_A 247 DVVITGVPSENY--KFP--TEYIKEGAVCINFA 275 (320)
T ss_dssp SEEEECCCCTTC--CBC--TTTSCTTEEEEECS
T ss_pred CEEEECCCCCcc--eeC--HHHcCCCeEEEEcC
Confidence 999999985321 011 23468998888774
No 259
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.97 E-value=0.00043 Score=67.87 Aligned_cols=71 Identities=15% Similarity=0.148 Sum_probs=51.3
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
.++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+...+... ..+..+ + ++|+||.+
T Consensus 119 ~~~~-k~vlvlGaGGaaraia~~L~~~------G~~~v~v~nRt~~ka~~La~~~~~~~----~~~l~~-l-~~DivIna 185 (282)
T 3fbt_A 119 EIKN-NICVVLGSGGAARAVLQYLKDN------FAKDIYVVTRNPEKTSEIYGEFKVIS----YDELSN-L-KGDVIINC 185 (282)
T ss_dssp CCTT-SEEEEECSSTTHHHHHHHHHHT------TCSEEEEEESCHHHHHHHCTTSEEEE----HHHHTT-C-CCSEEEEC
T ss_pred CccC-CEEEEECCcHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHhcCccc----HHHHHh-c-cCCEEEEC
Confidence 3678 9999999999999999999998 98 88888887555444443222111 223334 4 89999999
Q ss_pred ecchH
Q 013877 186 ISDAA 190 (434)
Q Consensus 186 vpd~a 190 (434)
||...
T Consensus 186 Tp~Gm 190 (282)
T 3fbt_A 186 TPKGM 190 (282)
T ss_dssp SSTTS
T ss_pred CccCc
Confidence 98643
No 260
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.97 E-value=0.0036 Score=62.23 Aligned_cols=67 Identities=18% Similarity=0.147 Sum_probs=45.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHH--cC-------ccccCCCcCCHHhhhccCCE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA--AG-------FTEENGTLGDIYETISGSDL 181 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~--~G-------~~~~~~~~~~~~Ea~~~ADi 181 (434)
+||+|||.|.+|.++|..|... |+ ++.+.+....+....+.+ +. ... ...+..+++++||+
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~------~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v---~~t~d~~a~~~aDv 76 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK------QLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKV---RGTNDYKDLENSDV 76 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCE---EEESCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEE---EEcCCHHHHCCCCE
Confidence 7999999999999999999988 76 776666554433222221 11 111 01123578999999
Q ss_pred EEEeec
Q 013877 182 VLLLIS 187 (434)
Q Consensus 182 ViLavp 187 (434)
||++..
T Consensus 77 VIi~ag 82 (321)
T 3p7m_A 77 VIVTAG 82 (321)
T ss_dssp EEECCS
T ss_pred EEEcCC
Confidence 999964
No 261
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.97 E-value=0.0031 Score=62.22 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=43.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHH--cCcccc--C-CCcCCHHhhhccCCEEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGFTEE--N-GTLGDIYETISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G~~~~--~-~~~~~~~Ea~~~ADiViL 184 (434)
+||+|||.|++|.+++..|... |+ ++.+.+....+....+.+ .+.... + ....+..+++++||+||+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~------~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi 80 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQ------SIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVI 80 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEE
Confidence 6999999999999999999887 65 554444332222222221 111100 0 001145778999999999
Q ss_pred eecc
Q 013877 185 LISD 188 (434)
Q Consensus 185 avpd 188 (434)
+++.
T Consensus 81 ~ag~ 84 (317)
T 3d0o_A 81 CAGA 84 (317)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9853
No 262
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.96 E-value=0.0015 Score=64.42 Aligned_cols=80 Identities=10% Similarity=0.122 Sum_probs=57.4
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhcc---CCEEEEeec
Q 013877 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG---SDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~-A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~---ADiViLavp 187 (434)
.||||||+|.||. .++..|++. .+++++...+.+.+ ..|+.. ..+.+|++++ .|+|++++|
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~-----~~~~lvav~d~~~~------~~g~~~----~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKN-----ANFKLVATASRHGT------VEGVNS----YTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHC-----TTEEEEEEECSSCC------CTTSEE----ESSHHHHHHHCTTCCEEEECSC
T ss_pred ceEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEEeCChh------hcCCCc----cCCHHHHHhCCCCCCEEEEeCC
Confidence 4899999999998 789999875 15565444444332 246653 6789998865 899999999
Q ss_pred chHHHHHHHHHHhcCCCCcEEE
Q 013877 188 DAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
+..+.++..... +.|+-|.
T Consensus 91 ~~~H~~~~~~al---~aGkhVl 109 (330)
T 4ew6_A 91 PQYRYEAAYKAL---VAGKHVF 109 (330)
T ss_dssp HHHHHHHHHHHH---HTTCEEE
T ss_pred cHHHHHHHHHHH---HcCCcEE
Confidence 999988776543 3455444
No 263
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.95 E-value=0.0014 Score=64.33 Aligned_cols=74 Identities=16% Similarity=0.208 Sum_probs=59.1
Q ss_pred cCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEee
Q 013877 108 FNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 108 ~~g~kkIgIIG~G~-mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
++| +++.|||.|. +|.++|+.|... |..|++..+. ..++++.+++||+||.++
T Consensus 148 l~G-k~vvVvG~s~iVG~plA~lL~~~------gAtVtv~~~~-------------------t~~L~~~~~~ADIVI~Av 201 (276)
T 3ngx_A 148 YHE-NTVTIVNRSPVVGRPLSMMLLNR------NYTVSVCHSK-------------------TKDIGSMTRSSKIVVVAV 201 (276)
T ss_dssp CCS-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHHHSSEEEECS
T ss_pred cCC-CEEEEEcCChHHHHHHHHHHHHC------CCeEEEEeCC-------------------cccHHHhhccCCEEEECC
Confidence 899 9999999985 899999999988 8888876542 246889999999999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 187 SDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
+-.. ++. ..++|+|++|++++
T Consensus 202 g~p~---~I~--~~~vk~GavVIDvg 222 (276)
T 3ngx_A 202 GRPG---FLN--REMVTPGSVVIDVG 222 (276)
T ss_dssp SCTT---CBC--GGGCCTTCEEEECC
T ss_pred CCCc---ccc--HhhccCCcEEEEec
Confidence 8532 222 24579999988764
No 264
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.94 E-value=0.002 Score=64.22 Aligned_cols=70 Identities=20% Similarity=0.200 Sum_probs=45.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHH--HHcCcccc--CCC-cCCHHhhhccCCEEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEA--RAAGFTEE--NGT-LGDIYETISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A--~~~G~~~~--~~~-~~~~~Ea~~~ADiViL 184 (434)
+||+|||.|.+|.++|..|... |+ ++++.+....+....+ ...++... +-. ..+..+++++||+||+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~------~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi 79 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ------GITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCI 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEE
Confidence 7999999999999999999988 76 6665554332222222 12232110 000 1223578999999999
Q ss_pred eec
Q 013877 185 LIS 187 (434)
Q Consensus 185 avp 187 (434)
+..
T Consensus 80 ~ag 82 (326)
T 3pqe_A 80 CAG 82 (326)
T ss_dssp CCS
T ss_pred ecc
Confidence 974
No 265
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.92 E-value=0.0026 Score=63.14 Aligned_cols=68 Identities=21% Similarity=0.172 Sum_probs=46.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHH--c-------CccccCCCcCCHHhhhccCC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--A-------GFTEENGTLGDIYETISGSD 180 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~--~-------G~~~~~~~~~~~~Ea~~~AD 180 (434)
+||+|||.|.||.++|..|... |+ ++++.+....+....+.+ + .... ...+..+++++||
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v---~~~~~~~a~~~aD 71 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ------DVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRV---TGTNDYGPTEDSD 71 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEE---EEESSSGGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEE---EECCCHHHhCCCC
Confidence 5899999999999999999988 76 776665554433222211 1 1111 0124568899999
Q ss_pred EEEEeecc
Q 013877 181 LVLLLISD 188 (434)
Q Consensus 181 iViLavpd 188 (434)
+||++.+.
T Consensus 72 vVii~ag~ 79 (314)
T 3nep_X 72 VCIITAGL 79 (314)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999753
No 266
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=96.91 E-value=0.0016 Score=65.90 Aligned_cols=66 Identities=21% Similarity=0.221 Sum_probs=49.6
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc-cCCEEEEe
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLL 185 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~-~ADiViLa 185 (434)
.++| |+|+|+|+|++|...|+.|+.. |.+|++.+.. ....+.+.+.|.. ..+.+++.. +||+++.|
T Consensus 172 ~L~G-ktV~I~G~GnVG~~~A~~l~~~------GakVvvsD~~-~~~~~~a~~~ga~-----~v~~~ell~~~~DIliP~ 238 (355)
T 1c1d_A 172 SLDG-LTVLVQGLGAVGGSLASLAAEA------GAQLLVADTD-TERVAHAVALGHT-----AVALEDVLSTPCDVFAPC 238 (355)
T ss_dssp CSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCGGGGGGCCCSEEEEC
T ss_pred CCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEeCC-ccHHHHHHhcCCE-----EeChHHhhcCccceecHh
Confidence 6899 9999999999999999999988 9998855443 3224455556654 235667766 89998743
No 267
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.91 E-value=0.0012 Score=68.68 Aligned_cols=73 Identities=18% Similarity=0.196 Sum_probs=47.7
Q ss_pred CEEEEEcccch--HHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc---------CccccCCCcCCHHhhhccCC
Q 013877 112 NQIGVIGWGSQ--GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---------GFTEENGTLGDIYETISGSD 180 (434)
Q Consensus 112 kkIgIIG~G~m--G~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~---------G~~~~~~~~~~~~Ea~~~AD 180 (434)
+||+|||.|+| |.+++..|...- + -.| +|++.+.. +...+..... .+.. +.|.+|++++||
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~-~-~~g-eV~L~Di~-~e~le~~~~~~~~l~~~~~~I~~----TtD~~eAl~dAD 77 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDE-R-MSG-TVALYDLD-FEAAQKNEVIGNHSGNGRWRYEA----VSTLKKALSAAD 77 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCS-S-CCE-EEEEECSS-HHHHHHHHHHHTTSTTSCEEEEE----ESSHHHHHTTCS
T ss_pred CEEEEECCChhHhHHHHHHHHHhcc-c-cCC-eEEEEeCC-HHHHHHHHHHHHHHhccCCeEEE----ECCHHHHhcCCC
Confidence 69999999998 578888887630 0 015 77665554 3222222211 1221 468899999999
Q ss_pred EEEEeecchHHH
Q 013877 181 LVLLLISDAAQA 192 (434)
Q Consensus 181 iViLavpd~a~~ 192 (434)
+||+++++....
T Consensus 78 fVI~airvG~~~ 89 (450)
T 3fef_A 78 IVIISILPGSLD 89 (450)
T ss_dssp EEEECCCSSCHH
T ss_pred EEEeccccCCcc
Confidence 999999876443
No 268
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.89 E-value=0.0025 Score=63.84 Aligned_cols=69 Identities=25% Similarity=0.239 Sum_probs=43.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHH--cC--ccccCC--CcCCHHhhhccCCEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG--FTEENG--TLGDIYETISGSDLVL 183 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G--~~~~~~--~~~~~~Ea~~~ADiVi 183 (434)
+||+|||.|.||.++|..|... |+ ++++.+....+....+.+ ++ +..... ...+.++ +++||+||
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~------g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVI 94 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK------DLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVV 94 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH------CCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEE
Confidence 8999999999999999999988 86 666555433222222211 11 110000 1235554 89999999
Q ss_pred Eeec
Q 013877 184 LLIS 187 (434)
Q Consensus 184 Lavp 187 (434)
++..
T Consensus 95 itaG 98 (330)
T 3ldh_A 95 ITAG 98 (330)
T ss_dssp ECCS
T ss_pred EeCC
Confidence 9853
No 269
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.87 E-value=0.0027 Score=62.55 Aligned_cols=68 Identities=24% Similarity=0.205 Sum_probs=44.4
Q ss_pred EEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHc---------CccccCCCcCCHHhhhccCCEE
Q 013877 113 QIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAA---------GFTEENGTLGDIYETISGSDLV 182 (434)
Q Consensus 113 kIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~---------G~~~~~~~~~~~~Ea~~~ADiV 182 (434)
||+|||.|+||.+++..|... |+ ++.+.+....+....+.+. ..... ...+. +++++||+|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~------~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~--~t~d~-~a~~~aD~V 71 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR------GYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRIS--GSNSY-EDMRGSDIV 71 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH------TCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEE--EESCG-GGGTTCSEE
T ss_pred CEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEE--ECCCH-HHhCCCCEE
Confidence 699999999999999999887 76 5666555433322222211 11110 01455 789999999
Q ss_pred EEeecch
Q 013877 183 LLLISDA 189 (434)
Q Consensus 183 iLavpd~ 189 (434)
|++.+..
T Consensus 72 i~~ag~~ 78 (308)
T 2d4a_B 72 LVTAGIG 78 (308)
T ss_dssp EECCSCC
T ss_pred EEeCCCC
Confidence 9996543
No 270
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.85 E-value=0.0021 Score=63.58 Aligned_cols=72 Identities=15% Similarity=0.161 Sum_probs=45.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHH--cCcccc-CC-CcCCHHhhhccCCEEEEe
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGFTEE-NG-TLGDIYETISGSDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G~~~~-~~-~~~~~~Ea~~~ADiViLa 185 (434)
+||+|||.|++|.+++..|... ++ ++.+.+....+....+.+ +..... +- ...+..+++++||+||++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ 79 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ------GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVIT 79 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEC
Confidence 6999999999999999999887 65 665555432222222322 111000 00 012456789999999999
Q ss_pred ecch
Q 013877 186 ISDA 189 (434)
Q Consensus 186 vpd~ 189 (434)
.+..
T Consensus 80 ag~~ 83 (318)
T 1ez4_A 80 AGAP 83 (318)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 8643
No 271
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.84 E-value=0.0013 Score=63.96 Aligned_cols=70 Identities=16% Similarity=0.176 Sum_probs=53.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeec
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavp 187 (434)
.+ ++|.|||.|-+|.+++..|.+. |. +|.|.+|+.++..+.+.+.+... ..+.. +.++|+||.+||
T Consensus 118 ~~-~~vlvlGaGgaarav~~~L~~~------G~~~i~v~nRt~~ka~~la~~~~~~~----~~~~~--~~~~DivInaTp 184 (271)
T 1npy_A 118 KN-AKVIVHGSGGMAKAVVAAFKNS------GFEKLKIYARNVKTGQYLAALYGYAY----INSLE--NQQADILVNVTS 184 (271)
T ss_dssp TT-SCEEEECSSTTHHHHHHHHHHT------TCCCEEEECSCHHHHHHHHHHHTCEE----ESCCT--TCCCSEEEECSS
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHcCCcc----chhhh--cccCCEEEECCC
Confidence 46 8999999999999999999998 87 78889998666667776655431 11222 468999999999
Q ss_pred chHH
Q 013877 188 DAAQ 191 (434)
Q Consensus 188 d~a~ 191 (434)
....
T Consensus 185 ~gm~ 188 (271)
T 1npy_A 185 IGMK 188 (271)
T ss_dssp TTCT
T ss_pred CCcc
Confidence 7653
No 272
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.80 E-value=0.0052 Score=61.44 Aligned_cols=94 Identities=16% Similarity=0.135 Sum_probs=59.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CchhHHHHHHcCccccCC-------------CcCCHHhhhc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEENG-------------TLGDIYETIS 177 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~-~~~s~~~A~~~G~~~~~~-------------~~~~~~Ea~~ 177 (434)
.||||||+|.||..+++.|.+. .+++++...+. .......+...|+....+ ...+.+++.+
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~-----p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~ 76 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQ-----PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK 76 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH
T ss_pred eEEEEEecCHHHHHHHHHHHcC-----CCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhc
Confidence 5899999999999999999865 14565443333 333445565555532100 0113445556
Q ss_pred cCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 178 ~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
++|+|+.|+|.....+..+... +.|..+++.++
T Consensus 77 ~vDvV~~aTp~~~s~~~a~~~~---~aG~kvV~~sa 109 (340)
T 1b7g_O 77 TSDIVVDTTPNGVGAQYKPIYL---QLQRNAIFQGG 109 (340)
T ss_dssp HCSEEEECCSTTHHHHHHHHHH---HTTCEEEECTT
T ss_pred CCCEEEECCCCchhHHHHHHHH---HcCCeEEEeCC
Confidence 8999999999998877765443 34655554443
No 273
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.80 E-value=0.0035 Score=62.30 Aligned_cols=72 Identities=14% Similarity=0.147 Sum_probs=45.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHH--cCcccc-CC-CcCCHHhhhccCCEEEEe
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGFTEE-NG-TLGDIYETISGSDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G~~~~-~~-~~~~~~Ea~~~ADiViLa 185 (434)
+||+|||.|++|.+++..|... ++ ++.+.+....+....+.+ +..... +- ...+..+++++||+||++
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~------~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ 83 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVIT 83 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEc
Confidence 6999999999999999999877 65 565555432222222322 221000 00 012456789999999999
Q ss_pred ecch
Q 013877 186 ISDA 189 (434)
Q Consensus 186 vpd~ 189 (434)
.+..
T Consensus 84 ag~~ 87 (326)
T 2zqz_A 84 AGAP 87 (326)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8643
No 274
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.79 E-value=0.0017 Score=64.40 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=58.9
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHH--hhhccCCEE
Q 013877 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY--ETISGSDLV 182 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~-mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~--Ea~~~ADiV 182 (434)
..++| +++.|||.|. +|.++|+.|... |..|.+..+.. .+++ +.+++||+|
T Consensus 161 i~l~G-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~~~~T-------------------~~l~l~~~~~~ADIV 214 (300)
T 4a26_A 161 IEMAG-KRAVVLGRSNIVGAPVAALLMKE------NATVTIVHSGT-------------------STEDMIDYLRTADIV 214 (300)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTTS-------------------CHHHHHHHHHTCSEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHHC------CCeEEEEeCCC-------------------CCchhhhhhccCCEE
Confidence 46889 9999999987 799999999998 88888776521 1344 789999999
Q ss_pred EEeecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
|.+++-.. ++. ..++|+|++|+++.
T Consensus 215 I~Avg~p~---~I~--~~~vk~GavVIDvg 239 (300)
T 4a26_A 215 IAAMGQPG---YVK--GEWIKEGAAVVDVG 239 (300)
T ss_dssp EECSCCTT---CBC--GGGSCTTCEEEECC
T ss_pred EECCCCCC---CCc--HHhcCCCcEEEEEe
Confidence 99999532 222 24579999988763
No 275
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.76 E-value=0.005 Score=61.53 Aligned_cols=96 Identities=16% Similarity=0.210 Sum_probs=59.8
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CchhHHHHHHcCcccc------------CC-Cc-CCHHhh
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEE------------NG-TL-GDIYET 175 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~-~~~s~~~A~~~G~~~~------------~~-~~-~~~~Ea 175 (434)
|.||||||+|.+|.-+++.|.+. .+++++...+. ...+...+...|+..- .+ .+ .+.++.
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-----~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~ 75 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-----DDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM 75 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-----SSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-----CCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHH
Confidence 36899999999999999999864 14565433332 2333334444331100 00 01 245667
Q ss_pred hccCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEeccc
Q 013877 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 176 ~~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~ 214 (434)
..++|+|+.|+|.....+..+... +.|+.+++.++-
T Consensus 76 ~~~vDvV~~atp~~~~~~~a~~~l---~aG~~VId~sp~ 111 (337)
T 1cf2_P 76 LDEADIVIDCTPEGIGAKNLKMYK---EKGIKAIFQGGE 111 (337)
T ss_dssp HHTCSEEEECCSTTHHHHHHHHHH---HHTCCEEECTTS
T ss_pred hcCCCEEEECCCchhhHHHHHHHH---HcCCEEEEecCC
Confidence 789999999999998887776543 345556666553
No 276
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.75 E-value=0.0027 Score=61.60 Aligned_cols=160 Identities=15% Similarity=0.118 Sum_probs=90.1
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchh---HHHHHHc-----CccccCCCcCCHHhhhccCCEE
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS---FAEARAA-----GFTEENGTLGDIYETISGSDLV 182 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s---~~~A~~~-----G~~~~~~~~~~~~Ea~~~ADiV 182 (434)
+||+|+|+ |.||..+++.+.+. .|++++...+.+... .+..... |+.. ..+.+++++++|+|
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~-----~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~----~~dl~~~l~~~DvV 76 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALAL-----EGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV----QSSLDAVKDDFDVF 76 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-----TTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE----ESCSTTTTTSCSEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCchhhhhhhHHHHcCCCcCCcee----cCCHHHHhcCCCEE
Confidence 68999999 99999999988754 167665444432211 0111111 2221 34567788899999
Q ss_pred EEeecchHHHHHHHHHHhcCCCCcEEEE-eccchhhhhhcccccCCCCccEEEeccCCChhhHH--HHHhhccccc--CC
Q 013877 183 LLLISDAAQADNYEKIFSCMKPNSILGL-SHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVR--RLYVQGKEIN--GA 257 (434)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~g~iL~~-s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr--~ly~~G~~~~--G~ 257 (434)
|-+++|....+++..... .|.-+++ ..|++....+. .....+.+. +..+||.+--..- ++.+.--... ++
T Consensus 77 IDft~p~~~~~~~~~a~~---~G~~vVigTtG~~~e~~~~-L~~~a~~~~-vv~a~N~siGvn~~~~l~~~aa~~~~~~~ 151 (273)
T 1dih_A 77 IDFTRPEGTLNHLAFCRQ---HGKGMVIGTTGFDEAGKQA-IRDAAADIA-IVFAANFSVGVNVMLKLLEKAAKVMGDYT 151 (273)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCEEEECCCCCCHHHHHH-HHHHTTTSC-EEECSCCCHHHHHHHHHHHHHHHHHTTTS
T ss_pred EEcCChHHHHHHHHHHHh---CCCCEEEECCCCCHHHHHH-HHHhcCCCC-EEEEecCcHHHHHHHHHHHHHHHhcCCCC
Confidence 988888877776665433 4443443 56886532221 111223445 4578887654311 1111100000 12
Q ss_pred CceEEEeecC----C-CCHHHHHHHHHHHHHhCC
Q 013877 258 GINSSFAVHQ----D-VDGRATNVALGWSVALGS 286 (434)
Q Consensus 258 Gv~aliav~q----d-vsg~a~e~a~~la~aiG~ 286 (434)
-+-- +-.|. | .||.++.++..++...|.
T Consensus 152 diei-iE~Hh~~K~DaPSGTA~~~ae~i~~~~~~ 184 (273)
T 1dih_A 152 DIEI-IEAHHRHKVDAPSGTALAMGEAIAHALDK 184 (273)
T ss_dssp EEEE-EEEECTTCCSSSCHHHHHHHHHHHHHTTC
T ss_pred CEEE-EEeecCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 2322 33333 3 689999999999988875
No 277
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.74 E-value=0.0027 Score=66.19 Aligned_cols=85 Identities=19% Similarity=0.227 Sum_probs=55.4
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcC---CHHhhhccCCEE
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG---DIYETISGSDLV 182 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~---~~~Ea~~~ADiV 182 (434)
..+++ ++|.|||.|.+|.+++..|.+. .|++|.+.+|..++..+.+...++......+. +..++++++|+|
T Consensus 19 ~~l~~-k~VlIiGAGgiG~aia~~L~~~-----~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvV 92 (467)
T 2axq_A 19 GRHMG-KNVLLLGSGFVAQPVIDTLAAN-----DDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVV 92 (467)
T ss_dssp ----C-EEEEEECCSTTHHHHHHHHHTS-----TTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred cCCCC-CEEEEECChHHHHHHHHHHHhC-----CCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEE
Confidence 45667 8999999999999999999875 14688888887554444443334321000022 345677899999
Q ss_pred EEeecchHHHHHHH
Q 013877 183 LLLISDAAQADNYE 196 (434)
Q Consensus 183 iLavpd~a~~~vl~ 196 (434)
|.++|+..+..+..
T Consensus 93 In~tp~~~~~~v~~ 106 (467)
T 2axq_A 93 ISLIPYTFHPNVVK 106 (467)
T ss_dssp EECSCGGGHHHHHH
T ss_pred EECCchhhhHHHHH
Confidence 99999876655443
No 278
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.73 E-value=0.0027 Score=62.53 Aligned_cols=76 Identities=14% Similarity=0.133 Sum_probs=59.5
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEE
Q 013877 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~-mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViL 184 (434)
..++| +++.|||.|. +|.++|+.|... |..|.+..+. ..++++.+++||+||.
T Consensus 157 i~l~G-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 210 (285)
T 3l07_A 157 IKTEG-AYAVVVGASNVVGKPVSQLLLNA------KATVTTCHRF-------------------TTDLKSHTTKADILIV 210 (285)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHhcccCCEEEE
Confidence 36889 9999999987 699999999988 8888776542 2367889999999999
Q ss_pred eecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
+++-... +. ..++|+|++|+++.
T Consensus 211 Avg~p~~---I~--~~~vk~GavVIDvg 233 (285)
T 3l07_A 211 AVGKPNF---IT--ADMVKEGAVVIDVG 233 (285)
T ss_dssp CCCCTTC---BC--GGGSCTTCEEEECC
T ss_pred CCCCCCC---CC--HHHcCCCcEEEEec
Confidence 9984222 22 24579999988774
No 279
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.69 E-value=0.0029 Score=62.34 Aligned_cols=76 Identities=18% Similarity=0.138 Sum_probs=59.7
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEE
Q 013877 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~-mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViL 184 (434)
..++| +++.|||.|. .|.++|+.|... |..|.+..+. ..++++.+++||+||.
T Consensus 156 i~l~G-k~vvVvGrs~iVG~p~A~lL~~~------gAtVtv~h~~-------------------t~~L~~~~~~ADIVI~ 209 (285)
T 3p2o_A 156 IDLEG-KDAVIIGASNIVGRPMATMLLNA------GATVSVCHIK-------------------TKDLSLYTRQADLIIV 209 (285)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHHhhcCCEEEE
Confidence 46889 9999999987 699999999988 8888776542 2367889999999999
Q ss_pred eecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
+++-... +. ..++|+|++|+++.
T Consensus 210 Avg~p~~---I~--~~~vk~GavVIDVg 232 (285)
T 3p2o_A 210 AAGCVNL---LR--SDMVKEGVIVVDVG 232 (285)
T ss_dssp CSSCTTC---BC--GGGSCTTEEEEECC
T ss_pred CCCCCCc---CC--HHHcCCCeEEEEec
Confidence 9984222 22 24679999988774
No 280
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.68 E-value=0.0037 Score=62.02 Aligned_cols=69 Identities=19% Similarity=0.179 Sum_probs=43.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC--chhHHHHHH--cC--ccccCCC--cCCHHhhhccCCEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG--SRSFAEARA--AG--FTEENGT--LGDIYETISGSDLV 182 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~--~~s~~~A~~--~G--~~~~~~~--~~~~~Ea~~~ADiV 182 (434)
+||+|||.|.||.++|..|... |+ +|++.++.. .+....+.+ +. +...... ..+..+++++||+|
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~------g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvV 82 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK------ELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVV 82 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEE
Confidence 7999999999999999999998 88 877666542 111111111 00 0000000 12235789999999
Q ss_pred EEee
Q 013877 183 LLLI 186 (434)
Q Consensus 183 iLav 186 (434)
|++.
T Consensus 83 Iiaa 86 (315)
T 3tl2_A 83 VITA 86 (315)
T ss_dssp EECC
T ss_pred EEeC
Confidence 9997
No 281
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.64 E-value=0.0032 Score=62.56 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=54.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecC---CchhHHHHHHc----CccccCCCcCC---HHhh
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK---GSRSFAEARAA----GFTEENGTLGD---IYET 175 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~---~~~s~~~A~~~----G~~~~~~~~~~---~~Ea 175 (434)
.++| +++.|+|.|-+|.+++..|.+. |. +|.+.+|+ .++..+.+.+. +....-....+ ..+.
T Consensus 151 ~l~g-k~~lVlGaGG~g~aia~~L~~~------Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (315)
T 3tnl_A 151 DIIG-KKMTICGAGGAATAICIQAALD------GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKE 223 (315)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred CccC-CEEEEECCChHHHHHHHHHHHC------CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhh
Confidence 4678 9999999999999999999998 98 88888887 34444444332 21110000222 3466
Q ss_pred hccCCEEEEeecchHH
Q 013877 176 ISGSDLVLLLISDAAQ 191 (434)
Q Consensus 176 ~~~ADiViLavpd~a~ 191 (434)
++++|+||.+||....
T Consensus 224 l~~aDiIINaTp~Gm~ 239 (315)
T 3tnl_A 224 IAESVIFTNATGVGMK 239 (315)
T ss_dssp HHTCSEEEECSSTTST
T ss_pred hcCCCEEEECccCCCC
Confidence 7899999999996543
No 282
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.63 E-value=0.0026 Score=64.74 Aligned_cols=94 Identities=13% Similarity=0.084 Sum_probs=60.3
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCC---cEEEEEecCCchhHHHHHHcC------ccccCCCc---CCHHhhhcc
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD---IVVKVGLRKGSRSFAEARAAG------FTEENGTL---GDIYETISG 178 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G---~~Vivg~r~~~~s~~~A~~~G------~~~~~~~~---~~~~Ea~~~ 178 (434)
|+||+|||+|.+|.++++.|.+. | .+|++..|+.++..+.+.+.+ +......+ .++++++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~------g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~ 74 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN------REVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE 74 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC------TTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh
Confidence 58999999999999999999987 6 278888776555444444321 21000001 234567777
Q ss_pred --CCEEEEeecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 179 --SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 179 --ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
+|+||.++|+.....+.+... +.|..+++.++
T Consensus 75 ~~~DvVin~ag~~~~~~v~~a~l---~~g~~vvD~a~ 108 (405)
T 4ina_A 75 VKPQIVLNIALPYQDLTIMEACL---RTGVPYLDTAN 108 (405)
T ss_dssp HCCSEEEECSCGGGHHHHHHHHH---HHTCCEEESSC
T ss_pred hCCCEEEECCCcccChHHHHHHH---HhCCCEEEecC
Confidence 899999999887766665432 23444444433
No 283
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.61 E-value=0.0033 Score=65.03 Aligned_cols=78 Identities=21% Similarity=0.150 Sum_probs=51.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcC-ccccCCCcC---CHHhhhccCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLG---DIYETISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G-~~~~~~~~~---~~~Ea~~~ADiViLavp 187 (434)
++|.|||.|.+|.+++..|.+. |.+|++..|..++..+.+...+ +......+. +..++++++|+||.++|
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~------G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~ 77 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDS------GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP 77 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTT------TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------cCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence 8999999999999999999988 8888888776433322222222 210000122 34467889999999999
Q ss_pred chHHHHHH
Q 013877 188 DAAQADNY 195 (434)
Q Consensus 188 d~a~~~vl 195 (434)
...+..+.
T Consensus 78 ~~~~~~i~ 85 (450)
T 1ff9_A 78 YTFHATVI 85 (450)
T ss_dssp --CHHHHH
T ss_pred cccchHHH
Confidence 86665443
No 284
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.60 E-value=0.0029 Score=62.84 Aligned_cols=77 Identities=18% Similarity=0.164 Sum_probs=54.2
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecC---CchhHHHHHHc----CccccCCCcCCH---Hhh
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK---GSRSFAEARAA----GFTEENGTLGDI---YET 175 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~---~~~s~~~A~~~----G~~~~~~~~~~~---~Ea 175 (434)
.++| +++.|+|.|-+|.+++..|.+. |. +|.|.+|+ .++..+.+.+. +....-....+. .+.
T Consensus 145 ~l~g-k~~lVlGAGGaaraia~~L~~~------G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~ 217 (312)
T 3t4e_A 145 DMRG-KTMVLLGAGGAATAIGAQAAIE------GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEA 217 (312)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred CcCC-CEEEEECcCHHHHHHHHHHHHc------CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhh
Confidence 4678 9999999999999999999998 98 78888887 44444444332 211000002233 566
Q ss_pred hccCCEEEEeecchH
Q 013877 176 ISGSDLVLLLISDAA 190 (434)
Q Consensus 176 ~~~ADiViLavpd~a 190 (434)
++++|+||.+||...
T Consensus 218 l~~~DiIINaTp~Gm 232 (312)
T 3t4e_A 218 LASADILTNGTKVGM 232 (312)
T ss_dssp HHHCSEEEECSSTTS
T ss_pred ccCceEEEECCcCCC
Confidence 789999999999764
No 285
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.59 E-value=0.011 Score=59.26 Aligned_cols=92 Identities=20% Similarity=0.133 Sum_probs=58.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchh-HHHHHHc--------------------CccccCCCcC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEARAA--------------------GFTEENGTLG 170 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s-~~~A~~~--------------------G~~~~~~~~~ 170 (434)
.||||+|+|.+|..+++.|.+. .+++++...+..... ...++.+ ++.. ..
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~-----~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v----~~ 73 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQ-----DDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPV----EG 73 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-----SSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCC----CC
T ss_pred eEEEEECCCHHHHHHHHHHHhC-----CCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEE----CC
Confidence 5899999999999999998765 135654333322211 1122222 2221 12
Q ss_pred CHHhhhccCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEeccc
Q 013877 171 DIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 171 ~~~Ea~~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~ 214 (434)
+..+...++|+|+.|+|.....+..+ ..+++.|+.|+++++.
T Consensus 74 ~~~~~~~~vDiV~eatg~~~s~~~a~--~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 74 TILDIIEDADIVVDGAPKKIGKQNLE--NIYKPHKVKAILQGGE 115 (343)
T ss_dssp BGGGTGGGCSEEEECCCTTHHHHHHH--HTTTTTTCEEEECTTS
T ss_pred chHHhccCCCEEEECCCccccHHHHH--HHHHHCCCEEEECCCc
Confidence 34455578999999999877665554 4678889877776653
No 286
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.58 E-value=0.0054 Score=61.17 Aligned_cols=98 Identities=16% Similarity=0.195 Sum_probs=56.7
Q ss_pred CCEEEEEcccchHHHHHHHHHhh---hhhhcCCcEEEEEecCC-chh----HH--HHHHc--CccccCCCcCCHHhhhc-
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDS---LAEAKSDIVVKVGLRKG-SRS----FA--EARAA--GFTEENGTLGDIYETIS- 177 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds---~~~~~~G~~Vivg~r~~-~~s----~~--~A~~~--G~~~~~~~~~~~~Ea~~- 177 (434)
|.||||||+|.+|..+++.|.+. +...|.+++|+...+.+ ... .. .+... +... +..+.+++++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~---~~~d~~~ll~~ 78 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLR---DDAKAIEVVRS 78 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCS---BCCCHHHHHHH
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCcccc---CCCCHHHHhcC
Confidence 57999999999999999999764 11122356654333332 111 11 11111 1110 0137888885
Q ss_pred -cCCEEEEeecchHH-HHHHHHHHhcCCCCcEEEEe
Q 013877 178 -GSDLVLLLISDAAQ-ADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 178 -~ADiViLavpd~a~-~~vl~eI~~~Lk~g~iL~~s 211 (434)
+.|+|+.|+|+..+ .+.++-+...|+.|+-|+..
T Consensus 79 ~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~ 114 (327)
T 3do5_A 79 ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTS 114 (327)
T ss_dssp SCCSEEEECCCCC----CHHHHHHHHHTTTCEEEEC
T ss_pred CCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEec
Confidence 58999999999876 22333345567788866544
No 287
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.57 E-value=0.004 Score=61.35 Aligned_cols=76 Identities=21% Similarity=0.171 Sum_probs=59.2
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEE
Q 013877 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~-mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViL 184 (434)
..++| +++.|||.|. .|.++|+-|... |..|.+..+. ..++++.+++||+||.
T Consensus 157 i~l~G-k~vvVvGrs~iVG~plA~lL~~~------gAtVtv~hs~-------------------T~~L~~~~~~ADIVI~ 210 (286)
T 4a5o_A 157 ADLYG-MDAVVVGASNIVGRPMALELLLG------GCTVTVTHRF-------------------TRDLADHVSRADLVVV 210 (286)
T ss_dssp CCCTT-CEEEEECTTSTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHHTCSEEEE
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHC------CCeEEEEeCC-------------------CcCHHHHhccCCEEEE
Confidence 35789 9999999986 799999999988 8888776432 2367889999999999
Q ss_pred eecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
+++-.. ++. ..++|||++|+++.
T Consensus 211 Avg~p~---~I~--~~~vk~GavVIDvg 233 (286)
T 4a5o_A 211 AAGKPG---LVK--GEWIKEGAIVIDVG 233 (286)
T ss_dssp CCCCTT---CBC--GGGSCTTCEEEECC
T ss_pred CCCCCC---CCC--HHHcCCCeEEEEec
Confidence 998422 222 24579999988774
No 288
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.56 E-value=0.0036 Score=61.71 Aligned_cols=71 Identities=20% Similarity=0.160 Sum_probs=43.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHH--cCcccc-C-CCcCCHHhhhccCCEEEEe
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGFTEE-N-GTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G~~~~-~-~~~~~~~Ea~~~ADiViLa 185 (434)
+||+|||.|++|.+++..|... ++ ++.+.+....+....+.+ +..... + ....+..+++++||+||++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ 74 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL------GVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLA 74 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEEC
Confidence 5899999999999999999877 53 565555442222222332 111000 0 0011336789999999998
Q ss_pred ecc
Q 013877 186 ISD 188 (434)
Q Consensus 186 vpd 188 (434)
.+.
T Consensus 75 ag~ 77 (310)
T 2xxj_A 75 AGV 77 (310)
T ss_dssp CCC
T ss_pred CCC
Confidence 763
No 289
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.51 E-value=0.011 Score=58.28 Aligned_cols=68 Identities=18% Similarity=0.183 Sum_probs=44.7
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCC--cEEEEEecCCchhHHHHHH--cCcccc--CCC--cCCHHhhhccCCEE
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARA--AGFTEE--NGT--LGDIYETISGSDLV 182 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G--~~Vivg~r~~~~s~~~A~~--~G~~~~--~~~--~~~~~Ea~~~ADiV 182 (434)
+||+|||. |.+|.+++..|... | .++.+.+... ....+.+ .+.... ..+ ..+.++++++||+|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~------~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvV 72 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS------PLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVV 72 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC------TTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEE
Confidence 58999998 99999999999877 6 4666555543 2223222 221110 000 13577899999999
Q ss_pred EEeec
Q 013877 183 LLLIS 187 (434)
Q Consensus 183 iLavp 187 (434)
|++..
T Consensus 73 vi~ag 77 (314)
T 1mld_A 73 VIPAG 77 (314)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 99874
No 290
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.43 E-value=0.0048 Score=60.80 Aligned_cols=76 Identities=16% Similarity=0.104 Sum_probs=59.3
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEE
Q 013877 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~-mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViL 184 (434)
..++| +++.|||.|. .|..+|+-|... |..|.+..+. ..++.+.+++||+||.
T Consensus 155 i~l~g-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 208 (288)
T 1b0a_A 155 IDTFG-LNAVVIGASNIVGRPMSMELLLA------GCTTTVTHRF-------------------TKNLRHHVENADLLIV 208 (288)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHTT------TCEEEEECSS-------------------CSCHHHHHHHCSEEEE
T ss_pred CCCCC-CEEEEECCChHHHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHHhccCCEEEE
Confidence 36889 9999999997 599999999988 8888776422 2467889999999999
Q ss_pred eecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
+++.... +. ..++|+|++|++++
T Consensus 209 Avg~p~l---I~--~~~vk~GavVIDVg 231 (288)
T 1b0a_A 209 AVGKPGF---IP--GDWIKEGAIVIDVG 231 (288)
T ss_dssp CSCCTTC---BC--TTTSCTTCEEEECC
T ss_pred CCCCcCc---CC--HHHcCCCcEEEEcc
Confidence 9995432 21 23479999988774
No 291
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.41 E-value=0.00094 Score=62.78 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=53.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc-cCCEEEEeecchH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLISDAA 190 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~-~ADiViLavpd~a 190 (434)
++|+|||+|++|.++++.+... . |++++...+.++..... ...|+.+. ...++++.++ +.|+|++|+|...
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~----~-g~~iVg~~D~dp~k~g~-~i~gv~V~--~~~dl~ell~~~ID~ViIA~Ps~~ 152 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFG----E-SFELRGFFDVDPEKVGR-PVRGGVIE--HVDLLPQRVPGRIEIALLTVPREA 152 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCC----S-SEEEEEEEESCTTTTTC-EETTEEEE--EGGGHHHHSTTTCCEEEECSCHHH
T ss_pred CEEEEECccHHHHHHHHhHhhc----C-CcEEEEEEeCCHHHHhh-hhcCCeee--cHHhHHHHHHcCCCEEEEeCCchh
Confidence 6899999999999999864322 2 67765555544432211 11233321 1456778776 5899999999998
Q ss_pred HHHHHHHHHh
Q 013877 191 QADNYEKIFS 200 (434)
Q Consensus 191 ~~~vl~eI~~ 200 (434)
+.++.+.+..
T Consensus 153 ~~ei~~~l~~ 162 (211)
T 2dt5_A 153 AQKAADLLVA 162 (211)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888776644
No 292
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.41 E-value=0.0079 Score=57.25 Aligned_cols=87 Identities=18% Similarity=0.210 Sum_probs=57.1
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-------------------chhHHHHHHc----
Q 013877 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFAEARAA---- 160 (434)
Q Consensus 105 ~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~-------------------~~s~~~A~~~---- 160 (434)
...|++ ++|.|||+|.+|..++++|... |+ ++.+.++.. .+....++..
T Consensus 26 q~~l~~-~~VlVvG~Gg~G~~va~~La~~------Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n 98 (249)
T 1jw9_B 26 QEALKD-SRVLIVGLGGLGCAASQYLASA------GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN 98 (249)
T ss_dssp HHHHHH-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred HHHHhC-CeEEEEeeCHHHHHHHHHHHHc------CCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC
Confidence 356788 9999999999999999999998 87 666665543 3333322221
Q ss_pred -Ccccc--CCCcC--CHHhhhccCCEEEEeecchHHHHHHHHH
Q 013877 161 -GFTEE--NGTLG--DIYETISGSDLVLLLISDAAQADNYEKI 198 (434)
Q Consensus 161 -G~~~~--~~~~~--~~~Ea~~~ADiViLavpd~a~~~vl~eI 198 (434)
+.... ..... +..+.++++|+||.++++......+.+.
T Consensus 99 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~ 141 (249)
T 1jw9_B 99 PHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAG 141 (249)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHH
T ss_pred CCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHH
Confidence 11110 11111 2356788999999999877665555543
No 293
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.37 E-value=0.0019 Score=62.38 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=52.4
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCc--------cccCCCcCCHHhhhcc
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF--------TEENGTLGDIYETISG 178 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~--------~~~~~~~~~~~Ea~~~ 178 (434)
.++| +++.|+|.|-+|.+++..|.+. | +|++.+|+.++..+.+.+.+. .. + +.+..+.+.+
T Consensus 125 ~l~~-k~vlV~GaGgiG~aia~~L~~~------G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~-d--~~~~~~~~~~ 193 (287)
T 1nvt_A 125 RVKD-KNIVIYGAGGAARAVAFELAKD------N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEV-K--FSGLDVDLDG 193 (287)
T ss_dssp CCCS-CEEEEECCSHHHHHHHHHHTSS------S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHE-E--EECTTCCCTT
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHC------C-CEEEEECCHHHHHHHHHHHhhhcccccceeE-E--EeeHHHhhCC
Confidence 4678 9999999999999999999998 9 998888765444344333211 10 0 1233566778
Q ss_pred CCEEEEeecchHH
Q 013877 179 SDLVLLLISDAAQ 191 (434)
Q Consensus 179 ADiViLavpd~a~ 191 (434)
+|+||.++|....
T Consensus 194 ~DilVn~ag~~~~ 206 (287)
T 1nvt_A 194 VDIIINATPIGMY 206 (287)
T ss_dssp CCEEEECSCTTCT
T ss_pred CCEEEECCCCCCC
Confidence 9999999986543
No 294
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.37 E-value=0.0069 Score=63.07 Aligned_cols=90 Identities=19% Similarity=0.148 Sum_probs=55.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CchhHHHHHHc-C--ccc--------------c--CCCcCC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAA-G--FTE--------------E--NGTLGD 171 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~-~~~s~~~A~~~-G--~~~--------------~--~~~~~~ 171 (434)
.||||||+|.||..++..+.+. .+++++...+. .++..+.+.+. | +.. . -..+.|
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~-----~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D 98 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARM-----QGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDD 98 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-----SSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESC
T ss_pred eEEEEECChHHHHHHHHHHhhC-----CCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECC
Confidence 5899999999999999988754 15665444443 33433333333 5 100 0 001468
Q ss_pred HHhhhc--cCCEEEEeecch-HHHHHHHHHHhcCCCCcEEE
Q 013877 172 IYETIS--GSDLVLLLISDA-AQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 172 ~~Ea~~--~ADiViLavpd~-a~~~vl~eI~~~Lk~g~iL~ 209 (434)
.+++++ +.|+|++++|+. .+.++... .|+.|+-|+
T Consensus 99 ~eeLL~d~dIDaVviaTp~p~~H~e~a~~---AL~AGKHVv 136 (446)
T 3upl_A 99 NDLILSNPLIDVIIDATGIPEVGAETGIA---AIRNGKHLV 136 (446)
T ss_dssp HHHHHTCTTCCEEEECSCCHHHHHHHHHH---HHHTTCEEE
T ss_pred HHHHhcCCCCCEEEEcCCChHHHHHHHHH---HHHcCCcEE
Confidence 889887 489999999864 44454433 345677555
No 295
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.36 E-value=0.0072 Score=59.93 Aligned_cols=76 Identities=16% Similarity=0.179 Sum_probs=59.6
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEE
Q 013877 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~-mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViL 184 (434)
..++| +++.|||.|+ .|..+|+-|... |..|.+..+. ..++.+.+++||+||.
T Consensus 161 i~l~g-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 214 (301)
T 1a4i_A 161 VPIAG-RHAVVVGRSKIVGAPMHDLLLWN------NATVTTCHSK-------------------TAHLDEEVNKGDILVV 214 (301)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHhC------CCeEEEEECC-------------------cccHHHHhccCCEEEE
Confidence 36789 9999999996 699999999988 8888776421 2478899999999999
Q ss_pred eecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
+++.... +. ..++|+|++|++++
T Consensus 215 Avg~p~~---I~--~~~vk~GavVIDVg 237 (301)
T 1a4i_A 215 ATGQPEM---VK--GEWIKPGAIVIDCG 237 (301)
T ss_dssp CCCCTTC---BC--GGGSCTTCEEEECC
T ss_pred CCCCccc---CC--HHHcCCCcEEEEcc
Confidence 9996432 21 23478999998774
No 296
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.35 E-value=0.0088 Score=59.81 Aligned_cols=72 Identities=22% Similarity=0.234 Sum_probs=45.3
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHH--cC--ccccCC--CcCCHHhhhccC
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG--FTEENG--TLGDIYETISGS 179 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G--~~~~~~--~~~~~~Ea~~~A 179 (434)
... +||+|||.|.||.++|..|... |+ ++++.+....+....+.+ +. +..... ...+. +.+++|
T Consensus 17 ~~~-~kV~ViGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~a 88 (331)
T 4aj2_A 17 VPQ-NKITVVGVGAVGMACAISILMK------DLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANS 88 (331)
T ss_dssp CCS-SEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCC
Confidence 344 8999999999999999999887 76 666655543322222221 12 110000 02344 468999
Q ss_pred CEEEEeec
Q 013877 180 DLVLLLIS 187 (434)
Q Consensus 180 DiViLavp 187 (434)
|+||++..
T Consensus 89 DiVvi~aG 96 (331)
T 4aj2_A 89 KLVIITAG 96 (331)
T ss_dssp EEEEECCS
T ss_pred CEEEEccC
Confidence 99999853
No 297
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.30 E-value=0.0052 Score=61.36 Aligned_cols=70 Identities=14% Similarity=0.151 Sum_probs=44.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHH--cCcccc-CC-CcCCHHhhhccCCEEEEe
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGFTEE-NG-TLGDIYETISGSDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G~~~~-~~-~~~~~~Ea~~~ADiViLa 185 (434)
+||+|||.|.+|.++|..|... |+ ++.+.+....+....+.+ +..... +- ...+..+++++||+||++
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ 83 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVIT 83 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEEC
Confidence 8999999999999999999988 76 666555432222222221 111100 00 012346789999999998
Q ss_pred ec
Q 013877 186 IS 187 (434)
Q Consensus 186 vp 187 (434)
..
T Consensus 84 ag 85 (326)
T 3vku_A 84 AG 85 (326)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 298
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.19 E-value=0.0084 Score=51.63 Aligned_cols=109 Identities=18% Similarity=0.101 Sum_probs=71.9
Q ss_pred CCEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEee
Q 013877 111 INQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 111 ~kkIgIIG~----G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
.++|+|||. +..|..+.++|++. |++|+-.+.+... -.|... ..++.|+-. -|++++++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~------g~~V~pVnP~~~~------i~G~~~----y~sl~dlp~-vDlavi~~ 66 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSH------GHEFIPVGRKKGE------VLGKTI----INERPVIEG-VDTVTLYI 66 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHH------TCCEEEESSSCSE------ETTEEC----BCSCCCCTT-CCEEEECS
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHC------CCeEEEECCCCCc------CCCeec----cCChHHCCC-CCEEEEEe
Confidence 378999997 56899999999998 8876544433211 146553 455666555 89999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEEEEeccchhhhhhcccccCCCCccEEEeccCCChhh
Q 013877 187 SDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~ 243 (434)
|++.+.++++++... ... .|++..|+.-..+.+ +.-..++.++ ||+.+-.
T Consensus 67 p~~~v~~~v~e~~~~-g~k-~v~~~~G~~~~e~~~--~a~~~Girvv---~nC~gv~ 116 (122)
T 3ff4_A 67 NPQNQLSEYNYILSL-KPK-RVIFNPGTENEELEE--ILSENGIEPV---IGCTLVM 116 (122)
T ss_dssp CHHHHGGGHHHHHHH-CCS-EEEECTTCCCHHHHH--HHHHTTCEEE---ESCHHHH
T ss_pred CHHHHHHHHHHHHhc-CCC-EEEECCCCChHHHHH--HHHHcCCeEE---CCcCeEE
Confidence 999999999986653 223 467899984221111 0112466666 3776654
No 299
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.12 E-value=0.004 Score=60.50 Aligned_cols=98 Identities=18% Similarity=0.173 Sum_probs=64.3
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
.+++ +++.|||.|-.+.+++..|.+. |. +|.|.+|..++..+.++..+.....-......+.++++|+||.+
T Consensus 122 ~~~~-~~~lilGaGGaarai~~aL~~~------g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNa 194 (269)
T 3tum_A 122 EPAG-KRALVIGCGGVGSAIAYALAEA------GIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANA 194 (269)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEEC
T ss_pred Cccc-CeEEEEecHHHHHHHHHHHHHh------CCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccC
Confidence 4577 9999999999999999999988 86 78888887666555555432110000012233456789999999
Q ss_pred ecchHHHH----HHHHHHhcCCCCcEEEEe
Q 013877 186 ISDAAQAD----NYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 186 vpd~a~~~----vl~eI~~~Lk~g~iL~~s 211 (434)
||...... +-......++++.++.+.
T Consensus 195 Tp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~ 224 (269)
T 3tum_A 195 SPVGMGTRAELPLSAALLATLQPDTLVADV 224 (269)
T ss_dssp SSTTCSTTCCCSSCHHHHHTCCTTSEEEEC
T ss_pred CccccCCCCCCCCChHHHhccCCCcEEEEE
Confidence 99654321 112334556777777654
No 300
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.06 E-value=0.0067 Score=58.72 Aligned_cols=80 Identities=15% Similarity=0.022 Sum_probs=54.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchHH
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a~ 191 (434)
++|++||+|+||..+++. . +++++..++ ++.- +.|... +.|+++++.++|+|+-|.++.+.
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~------~leLv~v~~--~k~g----elgv~a----~~d~d~lla~pD~VVe~A~~~av 73 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G------NFEKIYAYD--RISK----DIPGVV----RLDEFQVPSDVSTVVECASPEAV 73 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S------CCSEEEEEC--SSCC----CCSSSE----ECSSCCCCTTCCEEEECSCHHHH
T ss_pred ceEEEECcCHHHHHHHhc---C------CcEEEEEEe--cccc----ccCcee----eCCHHHHhhCCCEEEECCCHHHH
Confidence 899999999999999887 2 454433233 2211 125543 56788888899999999988766
Q ss_pred HHHHHHHHhcCCCCcEEE-Eecc
Q 013877 192 ADNYEKIFSCMKPNSILG-LSHG 213 (434)
Q Consensus 192 ~~vl~eI~~~Lk~g~iL~-~s~G 213 (434)
.+.+ .+.|+.|.-++ .+-|
T Consensus 74 ~e~~---~~iL~aG~dvv~~S~g 93 (253)
T 1j5p_A 74 KEYS---LQILKNPVNYIIISTS 93 (253)
T ss_dssp HHHH---HHHTTSSSEEEECCGG
T ss_pred HHHH---HHHHHCCCCEEEcChh
Confidence 5544 44577887554 4444
No 301
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.04 E-value=0.0092 Score=61.93 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=51.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHH-HHHcCccccCCCcCC---HHhh-hccCCEEEEee
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-ARAAGFTEENGTLGD---IYET-ISGSDLVLLLI 186 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~-A~~~G~~~~~~~~~~---~~Ea-~~~ADiViLav 186 (434)
|||-|+|+|.+|..+|+.|... |++|++-+.. +...+. ....++..-.|...+ ++++ +++||+++.+|
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~------~~~v~vId~d-~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE------NNDITIVDKD-GDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST------TEEEEEEESC-HHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence 8999999999999999999988 9998766554 444444 444555321222223 2333 78999999999
Q ss_pred cchHHH
Q 013877 187 SDAAQA 192 (434)
Q Consensus 187 pd~a~~ 192 (434)
++...-
T Consensus 77 ~~De~N 82 (461)
T 4g65_A 77 NTDETN 82 (461)
T ss_dssp SCHHHH
T ss_pred CChHHH
Confidence 887653
No 302
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=96.04 E-value=0.004 Score=64.69 Aligned_cols=90 Identities=18% Similarity=0.211 Sum_probs=65.6
Q ss_pred cCCCCEEEEEccc----chHHHHHHHHHhhhhhhcCC-cEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEE
Q 013877 108 FNGINQIGVIGWG----SQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLV 182 (434)
Q Consensus 108 ~~g~kkIgIIG~G----~mG~A~A~nLrds~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiV 182 (434)
|+- ++|+|||.+ ..|..+.++|++. | ..| +...+.... -.|... ..++.|+-+..|++
T Consensus 6 ~~p-~siAVvGas~~~~~~g~~v~~~l~~~------g~~~v-~pVnP~~~~-----i~G~~~----y~sl~~lp~~~Dla 68 (457)
T 2csu_A 6 FNP-KGIAVIGASNDPKKLGYEVFKNLKEY------KKGKV-YPVNIKEEE-----VQGVKA----YKSVKDIPDEIDLA 68 (457)
T ss_dssp TSC-SEEEEETCCSCTTSHHHHHHHHHTTC------CSSEE-EEECSSCSE-----ETTEEC----BSSTTSCSSCCSEE
T ss_pred cCC-CeEEEECcCCCCCchHHHHHHHHHHc------CCCEE-EEECCCCCe-----ECCEec----cCCHHHcCCCCCEE
Confidence 444 899999998 7899999999876 4 444 344432221 146664 56778887789999
Q ss_pred EEeecchHHHHHHHHHHhcCCCCcEEEEeccch
Q 013877 183 LLLISDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (434)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~~ 215 (434)
++++|+..+.++++++... .-..+|+++.||.
T Consensus 69 vi~vp~~~~~~~v~e~~~~-Gi~~vv~~s~G~~ 100 (457)
T 2csu_A 69 IIVVPKRFVKDTLIQCGEK-GVKGVVIITAGFG 100 (457)
T ss_dssp EECSCHHHHHHHHHHHHHH-TCCEEEECCCSST
T ss_pred EEecCHHHHHHHHHHHHHc-CCCEEEEecCCCC
Confidence 9999999999999886543 2334778888884
No 303
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.99 E-value=0.02 Score=58.59 Aligned_cols=90 Identities=18% Similarity=0.172 Sum_probs=63.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecC----Cchh--------HHHHHHcCccccCCCcCCHH
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK----GSRS--------FAEARAAGFTEENGTLGDIY 173 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~----~~~s--------~~~A~~~G~~~~~~~~~~~~ 173 (434)
.+++ .||.|+|.|.+|.++|+.|... |. +|++.+++ ..+. ...|.+.... ....+++
T Consensus 189 ~l~~-~kVVv~GAGaAG~~iAkll~~~------G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~---~~~~~L~ 258 (388)
T 1vl6_A 189 KIEE-VKVVVNGIGAAGYNIVKFLLDL------GVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE---RLSGDLE 258 (388)
T ss_dssp CTTT-CEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT---CCCSCHH
T ss_pred CCCC-cEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc---CchhhHH
Confidence 4566 8999999999999999999988 88 78888876 3331 3444443211 1246799
Q ss_pred hhhccCCEEEEeecchHHHHHHHHHHhcCCCCcEEE
Q 013877 174 ETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 174 Ea~~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
|+++++|++|=+..|.... +++...|+++.+|.
T Consensus 259 eav~~ADVlIG~Sap~l~t---~emVk~Ma~~pIIf 291 (388)
T 1vl6_A 259 TALEGADFFIGVSRGNILK---PEWIKKMSRKPVIF 291 (388)
T ss_dssp HHHTTCSEEEECSCSSCSC---HHHHTTSCSSCEEE
T ss_pred HHHccCCEEEEeCCCCccC---HHHHHhcCCCCEEE
Confidence 9999999999887643321 24444577787664
No 304
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.95 E-value=0.035 Score=51.93 Aligned_cols=69 Identities=13% Similarity=0.089 Sum_probs=49.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecc
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd 188 (434)
++||.|+|.|.+|.++++.|.+. |++|++..|...+ .......++....+...+.+ ++++|+||.+..+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ------GWRIIGTSRNPDQ-MEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG------TCEEEEEESCGGG-HHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHC------CCEEEEEEcChhh-hhhHhhCCCeEEEecccccc--cCCCCEEEECCCc
Confidence 38999999999999999999998 9998877776443 33444455532111133333 7889999998864
No 305
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.94 E-value=0.021 Score=57.18 Aligned_cols=95 Identities=16% Similarity=0.085 Sum_probs=58.1
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CchhHHHHHHcCccc--------cCCCc--CCHHhhhc-c
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTE--------ENGTL--GDIYETIS-G 178 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~-~~~s~~~A~~~G~~~--------~~~~~--~~~~Ea~~-~ 178 (434)
+||+||| .|.+|..+++.|.+. .+++|+...+. ...........+... .+-.+ .+.++..+ +
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-----p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-----PMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFED 83 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-----SSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTT
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-----CCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCC
Confidence 6899999 899999999998765 13465444432 111111222222110 00001 14455556 8
Q ss_pred CCEEEEeecchHHHHHHHHHHhcCCCCcEEEEeccc
Q 013877 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 179 ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G~ 214 (434)
+|+||+|+|.....++.+.+. +.|..|++.+|.
T Consensus 84 ~DvV~~atp~~~~~~~a~~~~---~aG~~VId~s~~ 116 (354)
T 1ys4_A 84 VDIVFSALPSDLAKKFEPEFA---KEGKLIFSNASA 116 (354)
T ss_dssp CCEEEECCCHHHHHHHHHHHH---HTTCEEEECCST
T ss_pred CCEEEECCCchHHHHHHHHHH---HCCCEEEECCch
Confidence 999999999988887776654 457777777763
No 306
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.93 E-value=0.017 Score=58.07 Aligned_cols=74 Identities=15% Similarity=0.079 Sum_probs=46.6
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHH--HcC-ccccC-CCcCCHHhhhcc
Q 013877 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAG-FTEEN-GTLGDIYETISG 178 (434)
Q Consensus 106 ~~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~--~~G-~~~~~-~~~~~~~Ea~~~ 178 (434)
+++.+ +||+|||. |.+|.++|..+... |+ +|++.+....+....+. .++ +.... ....+..+++++
T Consensus 4 ~~~~~-~KV~ViGaaG~VG~~~a~~l~~~------g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~d 76 (343)
T 3fi9_A 4 SYLTE-EKLTIVGAAGMIGSNMAQTAAMM------RLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTD 76 (343)
T ss_dssp CCSCS-SEEEEETTTSHHHHHHHHHHHHT------TCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTT
T ss_pred cccCC-CEEEEECCCChHHHHHHHHHHhc------CCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCC
Confidence 34556 89999998 99999999998887 74 66554443222222111 111 21000 012467889999
Q ss_pred CCEEEEee
Q 013877 179 SDLVLLLI 186 (434)
Q Consensus 179 ADiViLav 186 (434)
||+||++.
T Consensus 77 ADvVvita 84 (343)
T 3fi9_A 77 AKYIVSSG 84 (343)
T ss_dssp EEEEEECC
T ss_pred CCEEEEcc
Confidence 99999985
No 307
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=95.93 E-value=0.026 Score=59.21 Aligned_cols=73 Identities=18% Similarity=0.126 Sum_probs=43.6
Q ss_pred CEEEEEcccchH--HHHHHHHHhhhhhhcC-CcEEEEEecCCchhHHHHH--------HcCccccCCCcCCHHhhhccCC
Q 013877 112 NQIGVIGWGSQG--PAQAQNLRDSLAEAKS-DIVVKVGLRKGSRSFAEAR--------AAGFTEENGTLGDIYETISGSD 180 (434)
Q Consensus 112 kkIgIIG~G~mG--~A~A~nLrds~~~~~~-G~~Vivg~r~~~~s~~~A~--------~~G~~~~~~~~~~~~Ea~~~AD 180 (434)
+||+|||.|+|| .++|..|.+. .+. |.+|++.++..++ .+.+. ..+....=....|..+++++||
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~---~~l~~~eV~L~Di~~e~-l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD 79 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKT---PGLSGSTVTLMDIDEER-LDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDAD 79 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTC---GGGTTCEEEEECSCHHH-HHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHHhc---CcCCCCEEEEEeCCHHH-HHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCC
Confidence 699999999985 6566677532 011 5577766665332 21111 1111100001357788999999
Q ss_pred EEEEeecc
Q 013877 181 LVLLLISD 188 (434)
Q Consensus 181 iViLavpd 188 (434)
+||+++|.
T Consensus 80 ~VIiaagv 87 (480)
T 1obb_A 80 FVINTAMV 87 (480)
T ss_dssp EEEECCCT
T ss_pred EEEECCCc
Confidence 99999974
No 308
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.92 E-value=0.018 Score=56.24 Aligned_cols=91 Identities=11% Similarity=0.188 Sum_probs=60.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCH---Hhh-hccCCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YET-ISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~---~Ea-~~~ADiViLavp 187 (434)
++|.|+|+|..|..+++.|.+. |+ |++. +.+++..+ +.+.|...-.+...+. .++ +++||.|+++++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~------g~-v~vi-d~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS------EV-FVLA-EDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS------CE-EEEE-SCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred CCEEEECCcHHHHHHHHHHHhC------Cc-EEEE-eCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence 6899999999999999999988 88 6554 44455555 6666664322223333 234 788999999999
Q ss_pred chHHHHHHHHHHhcCCCC-cEEEEe
Q 013877 188 DAAQADNYEKIFSCMKPN-SILGLS 211 (434)
Q Consensus 188 d~a~~~vl~eI~~~Lk~g-~iL~~s 211 (434)
+....-..-.....+.+. .++.-+
T Consensus 187 ~d~~n~~~~~~ar~~~~~~~iiar~ 211 (336)
T 1lnq_A 187 SDSETIHCILGIRKIDESVRIIAEA 211 (336)
T ss_dssp SHHHHHHHHHHHHTTCTTSEEEEEC
T ss_pred ccHHHHHHHHHHHHHCCCCeEEEEE
Confidence 875543333444556565 455544
No 309
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.87 E-value=0.024 Score=51.79 Aligned_cols=75 Identities=19% Similarity=0.166 Sum_probs=51.9
Q ss_pred ccccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCc-ccc--CCCcCCHHhhhccCC
Q 013877 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF-TEE--NGTLGDIYETISGSD 180 (434)
Q Consensus 105 ~~~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~-~~~--~~~~~~~~Ea~~~AD 180 (434)
...++| |+|.|.|. |-+|.++++.|.+. |++|++..|..++ .+.....++ ... |-+ .++.+++.+.|
T Consensus 16 ~~~l~~-~~ilVtGatG~iG~~l~~~L~~~------G~~V~~~~R~~~~-~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~D 86 (236)
T 3e8x_A 16 NLYFQG-MRVLVVGANGKVARYLLSELKNK------GHEPVAMVRNEEQ-GPELRERGASDIVVANLE-EDFSHAFASID 86 (236)
T ss_dssp -----C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSGGG-HHHHHHTTCSEEEECCTT-SCCGGGGTTCS
T ss_pred ccCcCC-CeEEEECCCChHHHHHHHHHHhC------CCeEEEEECChHH-HHHHHhCCCceEEEcccH-HHHHHHHcCCC
Confidence 356888 99999997 99999999999999 9999887776544 333334455 211 111 45567888999
Q ss_pred EEEEeecc
Q 013877 181 LVLLLISD 188 (434)
Q Consensus 181 iViLavpd 188 (434)
+||.+...
T Consensus 87 ~vi~~ag~ 94 (236)
T 3e8x_A 87 AVVFAAGS 94 (236)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998764
No 310
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=95.79 E-value=0.021 Score=56.87 Aligned_cols=98 Identities=14% Similarity=0.057 Sum_probs=55.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhh-hhhcCCcEEEEEecCCch---------hH-HHHHHcCccccCCCcCCHHhhhc--c
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSL-AEAKSDIVVKVGLRKGSR---------SF-AEARAAGFTEENGTLGDIYETIS--G 178 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~-~~~~~G~~Vivg~r~~~~---------s~-~~A~~~G~~~~~~~~~~~~Ea~~--~ 178 (434)
.+|+|||+|.+|..+++.|.+.- ...+.+++|+...+.+.. .+ +.+.+.|... +- ..+..+.+. +
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~-~~-~~d~~e~l~~~~ 82 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRIS-DR-AFSGPEDLMGEA 82 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSC-SS-BCCSGGGGTTSC
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCC-cc-cCCHHHHhcCCC
Confidence 47999999999999999998630 011124454333332211 12 2333445221 10 115566664 5
Q ss_pred CCEEEEeecchHHH-HHHHHHHhcCCCCcEEEEe
Q 013877 179 SDLVLLLISDAAQA-DNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 179 ADiViLavpd~a~~-~vl~eI~~~Lk~g~iL~~s 211 (434)
.|+|+.|+|+..+. ..++-+...|+.|+-|+.+
T Consensus 83 iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta 116 (325)
T 3ing_A 83 ADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA 116 (325)
T ss_dssp CSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEECCCCccccchHHHHHHHHHHCCCeEEEc
Confidence 89999999987552 2344445556777766543
No 311
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.79 E-value=0.015 Score=57.06 Aligned_cols=77 Identities=17% Similarity=0.193 Sum_probs=56.7
Q ss_pred ccCCCCEEEEEcccch-HHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 107 AFNGINQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~m-G~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
.++| +++.|||.|.+ |..+|+.|... +.|-.|.+..+. ..++.+.+++||+||.+
T Consensus 155 ~l~g-k~vvVvG~s~iVG~p~A~lL~~~----g~~atVtv~h~~-------------------t~~L~~~~~~ADIVI~A 210 (281)
T 2c2x_A 155 SIAG-AHVVVIGRGVTVGRPLGLLLTRR----SENATVTLCHTG-------------------TRDLPALTRQADIVVAA 210 (281)
T ss_dssp CCTT-CEEEEECCCTTTHHHHHHHHTST----TTCCEEEEECTT-------------------CSCHHHHHTTCSEEEEC
T ss_pred CCCC-CEEEEECCCcHHHHHHHHHHhcC----CCCCEEEEEECc-------------------hhHHHHHHhhCCEEEEC
Confidence 6889 99999999976 99999998765 002467766432 24688899999999999
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
++-... +. ..++|+|++|++.+
T Consensus 211 vg~p~~---I~--~~~vk~GavVIDVg 232 (281)
T 2c2x_A 211 VGVAHL---LT--ADMVRPGAAVIDVG 232 (281)
T ss_dssp SCCTTC---BC--GGGSCTTCEEEECC
T ss_pred CCCCcc---cC--HHHcCCCcEEEEcc
Confidence 994432 21 23478999888764
No 312
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.64 E-value=0.022 Score=56.93 Aligned_cols=93 Identities=11% Similarity=0.054 Sum_probs=56.4
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccc--cCCCcCCHHhhhccCCEEEEeecc
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE--ENGTLGDIYETISGSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~--~~~~~~~~~Ea~~~ADiViLavpd 188 (434)
+||+||| .|.+|..+.+.|.+. ..++++...+..+...+.....+... .+-.+.+.++ +.++|+||+|+|.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~ 78 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSH-----PYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPH 78 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC-----TTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCT
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-----CCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCc
Confidence 6899999 799999999999865 13465444443221111111111100 0111223333 4789999999999
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 189 AAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
....++.+.. ++.|..+++.++
T Consensus 79 ~~s~~~a~~~---~~aG~~VId~Sa 100 (345)
T 2ozp_A 79 GVFAREFDRY---SALAPVLVDLSA 100 (345)
T ss_dssp THHHHTHHHH---HTTCSEEEECSS
T ss_pred HHHHHHHHHH---HHCCCEEEEcCc
Confidence 8887776654 356777777665
No 313
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.62 E-value=0.03 Score=53.03 Aligned_cols=89 Identities=10% Similarity=0.129 Sum_probs=60.5
Q ss_pred cccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhH-HHHHHcCccccCCCcCCHHhhhcc
Q 013877 100 LFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AEARAAGFTEENGTLGDIYETISG 178 (434)
Q Consensus 100 ~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~-~~A~~~G~~~~~~~~~~~~Ea~~~ 178 (434)
-||.. -.++| ++|.|||.|.+|..-++.|.+. |.+|+|......+.. +.+.+.++....+. .. ++-+.+
T Consensus 22 ~~Pif-l~L~g-k~VLVVGgG~va~~ka~~Ll~~------GA~VtVvap~~~~~l~~l~~~~~i~~i~~~-~~-~~dL~~ 91 (223)
T 3dfz_A 22 MYTVM-LDLKG-RSVLVVGGGTIATRRIKGFLQE------GAAITVVAPTVSAEINEWEAKGQLRVKRKK-VG-EEDLLN 91 (223)
T ss_dssp CCEEE-ECCTT-CCEEEECCSHHHHHHHHHHGGG------CCCEEEECSSCCHHHHHHHHTTSCEEECSC-CC-GGGSSS
T ss_pred ccccE-EEcCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCCCCHHHHHHHHcCCcEEEECC-CC-HhHhCC
Confidence 36666 56899 9999999999999999999998 888877665433333 33333233221111 12 345678
Q ss_pred CCEEEEeecchHHHHHHHHH
Q 013877 179 SDLVLLLISDAAQADNYEKI 198 (434)
Q Consensus 179 ADiViLavpd~a~~~vl~eI 198 (434)
+|+||.++.+......+.+.
T Consensus 92 adLVIaAT~d~~~N~~I~~~ 111 (223)
T 3dfz_A 92 VFFIVVATNDQAVNKFVKQH 111 (223)
T ss_dssp CSEEEECCCCTHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHHHHHH
Confidence 99999999888776554444
No 314
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.62 E-value=0.034 Score=53.21 Aligned_cols=144 Identities=17% Similarity=0.195 Sum_probs=82.9
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc-cCCEEEEeecch
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLISDA 189 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~-~ADiViLavpd~ 189 (434)
+||+|+|+ |.||..+++.+.+. .+++++...+.+ .++++++. ++|+||-+++|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-----~~~elva~~d~~-------------------~dl~~~~~~~~DvvIDfT~p~ 56 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-----DDLTLSAELDAG-------------------DPLSLLTDGNTEVVIDFTHPD 56 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-----TTCEEEEEECTT-------------------CCTHHHHHTTCCEEEECSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEccC-------------------CCHHHHhccCCcEEEEccChH
Confidence 48999996 99999999998754 167776555432 12334443 789999888888
Q ss_pred HHHHHHHHHHhcCCCCc-EEEEeccchhhhhhcccccCC--CCccEEEeccCCChhh--HHHHHhhcccccCCCceEEEe
Q 013877 190 AQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFP--KNIGVIAVCPKGMGPS--VRRLYVQGKEINGAGINSSFA 264 (434)
Q Consensus 190 a~~~vl~eI~~~Lk~g~-iL~~s~G~~i~~~~~~~i~~~--~di~VI~v~Pn~pg~~--vr~ly~~G~~~~G~Gv~alia 264 (434)
...+.+..... .|. +|+-+.|++-...+...-... +++.+ ...||+.--. +.++.+.--... .-+- ++-
T Consensus 57 a~~~~~~~a~~---~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~v-v~a~N~siGv~ll~~l~~~aa~~~-~die-IiE 130 (245)
T 1p9l_A 57 VVMGNLEFLID---NGIHAVVGTTGFTAERFQQVESWLVAKPNTSV-LIAPNFAIGAVLSMHFAKQAARFF-DSAE-VIE 130 (245)
T ss_dssp THHHHHHHHHH---TTCEEEECCCCCCHHHHHHHHHHHHTSTTCEE-EECSCCCHHHHHHHHHHHHHGGGC-SEEE-EEE
T ss_pred HHHHHHHHHHH---cCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCE-EEECCccHHHHHHHHHHHHHHhhc-CCEE-EEE
Confidence 88777765433 344 444466876432211000111 14444 4688876533 111222110011 1122 233
Q ss_pred ecC----C-CCHHHHHHHHHHHHHhC
Q 013877 265 VHQ----D-VDGRATNVALGWSVALG 285 (434)
Q Consensus 265 v~q----d-vsg~a~e~a~~la~aiG 285 (434)
.|. | +||.++.++..++...+
T Consensus 131 ~HH~~K~DaPSGTA~~lae~i~~~~~ 156 (245)
T 1p9l_A 131 LHHPHKADAPSGTAARTAKLIAEARK 156 (245)
T ss_dssp EECTTCCSSSCHHHHHHHHHHHHHTT
T ss_pred CcccCCCCCCCHHHHHHHHHHHHhhc
Confidence 344 3 58999999999988765
No 315
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.59 E-value=0.024 Score=57.04 Aligned_cols=91 Identities=11% Similarity=0.036 Sum_probs=57.2
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCchhHHHHHHcCcccc----CCCcCCHHhhhccCCEEEEe
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEE----NGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~----~~~~~~~~Ea~~~ADiViLa 185 (434)
.||+|+| .|.+|..+++.|.+. . ++++...+..+...+.....+.... +-.+.+ ++..+++|+||+|
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~------p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~a 89 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH------PHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCC 89 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC------SSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEEC
T ss_pred cEEEEECcCCHHHHHHHHHHHcC------CCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEc
Confidence 5899999 899999999999876 4 4655444432222222222222100 000122 4455689999999
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
+|.....+.... + +.|..+++.++
T Consensus 90 tp~~~s~~~a~~---~-~aG~~VId~sa 113 (359)
T 1xyg_A 90 LPHGTTQEIIKE---L-PTALKIVDLSA 113 (359)
T ss_dssp CCTTTHHHHHHT---S-CTTCEEEECSS
T ss_pred CCchhHHHHHHH---H-hCCCEEEECCc
Confidence 998887766543 3 66887877766
No 316
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.56 E-value=0.039 Score=57.28 Aligned_cols=91 Identities=16% Similarity=0.248 Sum_probs=55.4
Q ss_pred EEEEEcccchHHHHHHHHHhhh----hhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEee
Q 013877 113 QIGVIGWGSQGPAQAQNLRDSL----AEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLI 186 (434)
Q Consensus 113 kIgIIG~G~mG~A~A~nLrds~----~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLav 186 (434)
+|||||+|.+|..++..|.+.. ...+.+++++...+.+....+.. ..+... ..+.+++++ +.|+|+.++
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-~~~~~~----~~d~~ell~d~diDvVve~t 86 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-AGGLPL----TTNPFDVVDDPEIDIVVELI 86 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-HTTCCE----ESCTHHHHTCTTCCEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-cccCcc----cCCHHHHhcCCCCCEEEEcC
Confidence 7999999999999998876421 11123555543344332222211 123322 467888886 579999999
Q ss_pred cc-hHHHHHHHHHHhcCCCCcEEEEe
Q 013877 187 SD-AAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 187 pd-~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
|+ ..+.+++.+ .|+.|+-|+..
T Consensus 87 p~~~~h~~~~~~---AL~aGKhVvte 109 (444)
T 3mtj_A 87 GGLEPARELVMQ---AIANGKHVVTA 109 (444)
T ss_dssp CSSTTHHHHHHH---HHHTTCEEEEC
T ss_pred CCchHHHHHHHH---HHHcCCEEEEC
Confidence 96 677666543 34566655543
No 317
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.46 E-value=0.063 Score=53.00 Aligned_cols=68 Identities=15% Similarity=0.157 Sum_probs=43.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC--cEEEEEecCCchhHHHHH--HcCccc--cCCC--cCCHHhhhccCCEE
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEAR--AAGFTE--ENGT--LGDIYETISGSDLV 182 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G--~~Vivg~r~~~~s~~~A~--~~G~~~--~~~~--~~~~~Ea~~~ADiV 182 (434)
+||+||| .|.+|.+++..|.+. | .+|++.+.... ...+. ...... .... ..+..++++++|+|
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~------g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvV 80 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMN------PLVSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLI 80 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHC------TTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEE
Confidence 7999999 899999999999887 7 46655443322 22221 111110 0000 12567889999999
Q ss_pred EEeec
Q 013877 183 LLLIS 187 (434)
Q Consensus 183 iLavp 187 (434)
|++.+
T Consensus 81 i~~ag 85 (326)
T 1smk_A 81 IVPAG 85 (326)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99975
No 318
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.45 E-value=0.041 Score=54.08 Aligned_cols=67 Identities=18% Similarity=0.085 Sum_probs=48.3
Q ss_pred CCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCc-hhHHHHHHcCccccCCCcCCHHhhh-ccCCEEEEe
Q 013877 111 INQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLL 185 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A-~A~nLrds~~~~~~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~~~~~~~Ea~-~~ADiViLa 185 (434)
+++|.|||.|-+|.+ +|+.|++. |++|.+.++... ...+..++.|+....+ .+.++.. .++|+||+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~------G~~V~~~D~~~~~~~~~~L~~~gi~v~~g--~~~~~l~~~~~d~vV~S 73 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA------GFEVSGCDAKMYPPMSTQLEALGIDVYEG--FDAAQLDEFKADVYVIG 73 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT------TCEEEEEESSCCTTHHHHHHHTTCEEEES--CCGGGGGSCCCSEEEEC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC------CCEEEEEcCCCCcHHHHHHHhCCCEEECC--CCHHHcCCCCCCEEEEC
Confidence 489999999999996 99999999 999988776542 2344556678764211 2344444 479999985
No 319
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.34 E-value=0.058 Score=48.05 Aligned_cols=69 Identities=16% Similarity=0.207 Sum_probs=46.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCH-HhhhccCCEEEEeecc
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI-YETISGSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~-~Ea~~~ADiViLavpd 188 (434)
|||.|+| .|.+|.++++.|.+. |++|++..|..++..... .++......+.+. .+++.+.|+||.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR------GHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC------CCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 5799999 599999999999999 999988777644322221 3332110001111 1678899999999865
No 320
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.33 E-value=0.033 Score=57.78 Aligned_cols=92 Identities=13% Similarity=0.151 Sum_probs=62.9
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc---EEEEEe----cC----Cchh---HH-----HHHHcCccccCC
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGL----RK----GSRS---FA-----EARAAGFTEENG 167 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~---~Vivg~----r~----~~~s---~~-----~A~~~G~~~~~~ 167 (434)
.+++ ++|.|+|.|..|.+++..|.+. |. +|++.+ |+ .... .. .+...+.. .
T Consensus 183 ~l~~-~rvlvlGAGgAg~aia~~L~~~------G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~---~ 252 (439)
T 2dvm_A 183 KISE-ITLALFGAGAAGFATLRILTEA------GVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGE---N 252 (439)
T ss_dssp CTTT-CCEEEECCSHHHHHHHHHHHHT------TCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTT---C
T ss_pred CccC-CEEEEECccHHHHHHHHHHHHc------CCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccc---c
Confidence 4677 8999999999999999999998 87 788888 65 1111 10 11111110 0
Q ss_pred CcCCHHhhhccCCEEEEeecc--hHHHHHHHHHHhcCCCCcEEEEe
Q 013877 168 TLGDIYETISGSDLVLLLISD--AAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 168 ~~~~~~Ea~~~ADiViLavpd--~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
...+..|+++++|+||-++|. ....+ +....|+++.+|.+.
T Consensus 253 ~~~~L~e~l~~aDVlInaT~~~~G~~~~---e~v~~m~~~~iVfDL 295 (439)
T 2dvm_A 253 IEGGPQEALKDADVLISFTRPGPGVIKP---QWIEKMNEDAIVFPL 295 (439)
T ss_dssp CCSSHHHHHTTCSEEEECSCCCSSSSCH---HHHTTSCTTCEEEEC
T ss_pred ccccHHHHhccCCEEEEcCCCccCCCCh---HHHHhcCCCCEEEEC
Confidence 134678999999999999997 54432 234457777777765
No 321
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.32 E-value=0.054 Score=54.22 Aligned_cols=93 Identities=15% Similarity=0.202 Sum_probs=57.3
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCC-----chhHHHHH--HcCccccCCCcC---CHHhhhccC
Q 013877 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-----SRSFAEAR--AAGFTEENGTLG---DIYETISGS 179 (434)
Q Consensus 111 ~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~-----~~s~~~A~--~~G~~~~~~~~~---~~~Ea~~~A 179 (434)
|.||+||| .|.+|..+.+.|.+. ..+++.....+. .+.....- -.|.. +-.+. +.++.++++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-----p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~--~~~v~~~~~~~~~~~~~ 76 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-----PHMNITALTVSAQSNDAGKLISDLHPQLKGIV--ELPLQPMSDISEFSPGV 76 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-----TTEEEEEEEEETTCTTTTSBHHHHCGGGTTTC--CCBEEEESSGGGTCTTC
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-----CCCcEEEEEecCchhhcCCchHHhCccccCcc--ceeEeccCCHHHHhcCC
Confidence 57999999 599999999988874 145554332221 12222110 01211 00111 344444899
Q ss_pred CEEEEeecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 180 DiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
|+||+|+|.....++.+++. +.|..+++.++
T Consensus 77 Dvvf~a~p~~~s~~~~~~~~---~~g~~vIDlSa 107 (337)
T 3dr3_A 77 DVVFLATAHEVSHDLAPQFL---EAGCVVFDLSG 107 (337)
T ss_dssp SEEEECSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CEEEECCChHHHHHHHHHHH---HCCCEEEEcCC
Confidence 99999999988887777653 46777776665
No 322
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.30 E-value=0.023 Score=55.85 Aligned_cols=69 Identities=16% Similarity=0.147 Sum_probs=42.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHHc----CccccCC--CcCCHHhhhccCCEEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA----GFTEENG--TLGDIYETISGSDLVL 183 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~~----G~~~~~~--~~~~~~Ea~~~ADiVi 183 (434)
+||+|||.|.+|.++|..|..+ ++ ++.+.+....+..-.|.+. -+..... ...+..+.+++||+|+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~------~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVv 74 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIV 74 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEE
Confidence 6899999999999999999887 65 5555544332233233221 1110000 0122246789999999
Q ss_pred Eee
Q 013877 184 LLI 186 (434)
Q Consensus 184 Lav 186 (434)
++.
T Consensus 75 itA 77 (294)
T 2x0j_A 75 VTA 77 (294)
T ss_dssp ECC
T ss_pred Eec
Confidence 975
No 323
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.28 E-value=0.07 Score=53.23 Aligned_cols=93 Identities=15% Similarity=0.136 Sum_probs=55.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC--CchhHHHHHHc----C-c-----------cccCCC-----
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEARAA----G-F-----------TEENGT----- 168 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~--~~~s~~~A~~~----G-~-----------~~~~~~----- 168 (434)
.||||+|+|.+|.-+++.|.+. .+++++..++. +........++ | + .. ++.
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~-----~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v-~g~~i~v~ 77 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNS-----GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVI-NGNPITIF 77 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEE-TTEEEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcC-----CCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEE-CCeEEEEE
Confidence 5999999999999999998765 14676544442 33222222221 1 0 00 000
Q ss_pred -cCCHHhhh---ccCCEEEEeecchHHHHHHHHHHhcCCCCc-EEEEecc
Q 013877 169 -LGDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS-ILGLSHG 213 (434)
Q Consensus 169 -~~~~~Ea~---~~ADiViLavpd~a~~~vl~eI~~~Lk~g~-iL~~s~G 213 (434)
..+++++- .++|+||.|+|.....+... .+++.|. .|.+++.
T Consensus 78 ~~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~---~~l~aGak~V~iSap 124 (335)
T 1u8f_O 78 QERDPSKIKWGDAGAEYVVESTGVFTTMEKAG---AHLQGGAKRVIISAP 124 (335)
T ss_dssp CCSSGGGCCTTTTTCCEEEECSSSCCSHHHHG---GGGGGTCSEEEESSC
T ss_pred ecCCHHHCccccCCCCEEEECCCchhhHHHHH---HHHhCCCeEEEeccC
Confidence 12444441 47899999999988876654 4566774 4555543
No 324
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.13 E-value=0.016 Score=58.33 Aligned_cols=22 Identities=32% Similarity=0.364 Sum_probs=20.2
Q ss_pred CEEEEEcccchHHHHHHHHHhh
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDS 133 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds 133 (434)
.+|||||+|.||..++..|++.
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~ 26 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAM 26 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC
T ss_pred EEEEEEecCHHHHHHHHHHHhc
Confidence 5899999999999999999875
No 325
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.07 E-value=0.06 Score=51.21 Aligned_cols=87 Identities=15% Similarity=0.219 Sum_probs=54.8
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-------------------chhHHHHHHc----
Q 013877 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFAEARAA---- 160 (434)
Q Consensus 105 ~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~-------------------~~s~~~A~~~---- 160 (434)
.+.|++ ++|.|||+|-+|..++++|..+ |+ ++.+.++.. .+....++..
T Consensus 23 q~~l~~-~~VlvvG~GglG~~va~~La~~------Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n 95 (251)
T 1zud_1 23 QQKLLD-SQVLIIGLGGLGTPAALYLAGA------GVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN 95 (251)
T ss_dssp HHHHHT-CEEEEECCSTTHHHHHHHHHHT------TCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred HHHHhc-CcEEEEccCHHHHHHHHHHHHc------CCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC
Confidence 367888 9999999999999999999998 87 555543211 2222222111
Q ss_pred -Ccccc--CCCc--CCHHhhhccCCEEEEeecchHHHHHHHHH
Q 013877 161 -GFTEE--NGTL--GDIYETISGSDLVLLLISDAAQADNYEKI 198 (434)
Q Consensus 161 -G~~~~--~~~~--~~~~Ea~~~ADiViLavpd~a~~~vl~eI 198 (434)
++... .... .+..+.++++|+||.++........+.+.
T Consensus 96 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~ 138 (251)
T 1zud_1 96 PDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAA 138 (251)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHH
T ss_pred CCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHH
Confidence 21110 0001 12456788899999999876665566554
No 326
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=94.92 E-value=0.072 Score=48.07 Aligned_cols=72 Identities=15% Similarity=0.213 Sum_probs=47.3
Q ss_pred CEEEEEc-ccchHHHHHHHHH-hhhhhhcCCcEEEEEecCCc-hhHHHH-HHcCccccCCCcCC---HHhhhccCCEEEE
Q 013877 112 NQIGVIG-WGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGS-RSFAEA-RAAGFTEENGTLGD---IYETISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLr-ds~~~~~~G~~Vivg~r~~~-~s~~~A-~~~G~~~~~~~~~~---~~Ea~~~ADiViL 184 (434)
|+|.|+| .|.+|.++++.|. +. |++|++..|..+ +..+.+ ...++......+.+ +.++++++|+||.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYT------DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHC------CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcC------CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 5699999 5999999999999 78 999887777643 222221 11222110111233 4567889999999
Q ss_pred eecch
Q 013877 185 LISDA 189 (434)
Q Consensus 185 avpd~ 189 (434)
+....
T Consensus 80 ~ag~~ 84 (221)
T 3r6d_A 80 GAMES 84 (221)
T ss_dssp SCCCC
T ss_pred cCCCC
Confidence 98753
No 327
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=94.92 E-value=0.081 Score=54.91 Aligned_cols=74 Identities=20% Similarity=0.093 Sum_probs=44.4
Q ss_pred CEEEEEcccch-HHHHHHHHHh--hhhhhcC-CcEEEEEecCC--chhHH---HHH----HcCccccCCCcCCHHhhhcc
Q 013877 112 NQIGVIGWGSQ-GPAQAQNLRD--SLAEAKS-DIVVKVGLRKG--SRSFA---EAR----AAGFTEENGTLGDIYETISG 178 (434)
Q Consensus 112 kkIgIIG~G~m-G~A~A~nLrd--s~~~~~~-G~~Vivg~r~~--~~s~~---~A~----~~G~~~~~~~~~~~~Ea~~~ 178 (434)
+||+|||.|+. |.+++..|.. . +. +.+|++.++.. .+... .+. ..+....=....|..+++++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~----~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~g 83 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYH----ELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDG 83 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTT----TCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC----CCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCC
Confidence 69999999998 8887777765 3 11 22566665544 22111 111 11211000013577899999
Q ss_pred CCEEEEeecch
Q 013877 179 SDLVLLLISDA 189 (434)
Q Consensus 179 ADiViLavpd~ 189 (434)
||+||++++..
T Consensus 84 AD~VVitagv~ 94 (450)
T 1s6y_A 84 ADFVTTQFRVG 94 (450)
T ss_dssp CSEEEECCCTT
T ss_pred CCEEEEcCCCC
Confidence 99999999954
No 328
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.90 E-value=0.043 Score=56.35 Aligned_cols=70 Identities=19% Similarity=0.195 Sum_probs=50.4
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCC---chhHHHHHHcCccccCCCcCCHHhhhcc-CCEE
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG---SRSFAEARAAGFTEENGTLGDIYETISG-SDLV 182 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~---~~s~~~A~~~G~~~~~~~~~~~~Ea~~~-ADiV 182 (434)
.++| ++|.|||.|..|.+.|+-|++. |++|.+.++.. +...+..++.|+....+ .+.++.+.+ +|+|
T Consensus 6 ~~~~-k~v~viG~G~sG~s~A~~l~~~------G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g--~~~~~~~~~~~d~v 76 (451)
T 3lk7_A 6 TFEN-KKVLVLGLARSGEAAARLLAKL------GAIVTVNDGKPFDENPTAQSLLEEGIKVVCG--SHPLELLDEDFCYM 76 (451)
T ss_dssp TTTT-CEEEEECCTTTHHHHHHHHHHT------TCEEEEEESSCGGGCHHHHHHHHTTCEEEES--CCCGGGGGSCEEEE
T ss_pred hcCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEeCCcccCChHHHHHHhCCCEEEEC--CChHHhhcCCCCEE
Confidence 4678 9999999999999999999999 99998877643 23344556678754211 123345566 8999
Q ss_pred EEe
Q 013877 183 LLL 185 (434)
Q Consensus 183 iLa 185 (434)
++.
T Consensus 77 v~s 79 (451)
T 3lk7_A 77 IKN 79 (451)
T ss_dssp EEC
T ss_pred EEC
Confidence 985
No 329
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=94.89 E-value=0.063 Score=53.65 Aligned_cols=93 Identities=11% Similarity=0.067 Sum_probs=55.1
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEec-CCchhHHHHHHcCcc--------ccCCCcC--CHHhhhccC
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFT--------EENGTLG--DIYETISGS 179 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r-~~~~s~~~A~~~G~~--------~~~~~~~--~~~Ea~~~A 179 (434)
.||+||| .|.+|.-+.+.|.+. ..++++...+ ..+.........++. ..+-.+. +.++ ++++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~v 78 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKH-----PYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDV 78 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTC-----SSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTC
T ss_pred cEEEEECcCCHHHHHHHHHHHhC-----CCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCC
Confidence 6899999 899999999988765 1346544432 111111122222221 0000011 3333 4789
Q ss_pred CEEEEeecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 180 DiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
|+||+|+|.....++..... +.|..|++.++
T Consensus 79 DvVf~atp~~~s~~~a~~~~---~aG~~VId~s~ 109 (350)
T 2ep5_A 79 DVVLSALPNELAESIELELV---KNGKIVVSNAS 109 (350)
T ss_dssp SEEEECCCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CEEEECCChHHHHHHHHHHH---HCCCEEEECCc
Confidence 99999999988887776543 45666776655
No 330
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=94.87 E-value=0.13 Score=51.47 Aligned_cols=72 Identities=14% Similarity=0.144 Sum_probs=51.9
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----chhHH----HHHHcCccccCCCcCCHHhhh
Q 013877 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLGDIYETI 176 (434)
Q Consensus 107 ~~~g~kkIgIIG~G--~mG~A~A~nLrds~~~~~~G~~Vivg~r~~----~~s~~----~A~~~G~~~~~~~~~~~~Ea~ 176 (434)
.|+| .||++||=| +++.|++..+..- |.+|.+...++ ....+ .|++.|.... ...+++|++
T Consensus 152 ~l~g-l~ia~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~eav 222 (333)
T 1duv_G 152 AFNE-MTLVYAGDARNNMGNSMLEAAALT------GLDLRLVAPQACWPEAALVTECRALAQQNGGNIT--LTEDVAKGV 222 (333)
T ss_dssp CGGG-CEEEEESCTTSHHHHHHHHHHHHH------CCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEE--EESCHHHHH
T ss_pred CCCC-cEEEEECCCccchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEE--EEECHHHHh
Confidence 5788 999999986 9999999999887 99887765432 12222 3336673210 156899999
Q ss_pred ccCCEEEEeec
Q 013877 177 SGSDLVLLLIS 187 (434)
Q Consensus 177 ~~ADiViLavp 187 (434)
++||+|+..+=
T Consensus 223 ~~aDvvytd~w 233 (333)
T 1duv_G 223 EGADFIYTDVW 233 (333)
T ss_dssp TTCSEEEECCS
T ss_pred CCCCEEEeCCc
Confidence 99999998544
No 331
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=94.81 E-value=0.13 Score=53.75 Aligned_cols=77 Identities=21% Similarity=0.094 Sum_probs=43.8
Q ss_pred CEEEEEcccch-HHHHHHHHHhhhhhhcC-CcEEEEEecCCchhHH---HHH----HcCccccCCCcCCHHhhhccCCEE
Q 013877 112 NQIGVIGWGSQ-GPAQAQNLRDSLAEAKS-DIVVKVGLRKGSRSFA---EAR----AAGFTEENGTLGDIYETISGSDLV 182 (434)
Q Consensus 112 kkIgIIG~G~m-G~A~A~nLrds~~~~~~-G~~Vivg~r~~~~s~~---~A~----~~G~~~~~~~~~~~~Ea~~~ADiV 182 (434)
+||+|||.|+. |.++|..|.... .+. +.+|++.++...+... .+. ..+....=....|..+++++||+|
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~--~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~V 106 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHL--EEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV 106 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTT--TTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhCC--CCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEE
Confidence 59999999998 565666665430 011 3366666654332111 111 111110000135778999999999
Q ss_pred EEeecchH
Q 013877 183 LLLISDAA 190 (434)
Q Consensus 183 iLavpd~a 190 (434)
|+++|...
T Consensus 107 Viaag~~~ 114 (472)
T 1u8x_X 107 MAHIRVGK 114 (472)
T ss_dssp EECCCTTH
T ss_pred EEcCCCcc
Confidence 99998743
No 332
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=94.80 E-value=0.077 Score=51.80 Aligned_cols=66 Identities=24% Similarity=0.269 Sum_probs=41.1
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc--EEEEEecC-CchhH-HHHHHc--------CccccCCCcCCHHhhhcc
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRK-GSRSF-AEARAA--------GFTEENGTLGDIYETISG 178 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~-~~~s~-~~A~~~--------G~~~~~~~~~~~~Ea~~~ 178 (434)
+||+||| .|.+|.+++..|... |+ ++.+.+++ +.... ..+.+. .... ..+..+++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~------~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v----~~~~~~a~~~ 70 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR------DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRV----RQGGYEDTAG 70 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEE----EECCGGGGTT
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEE----EeCCHHHhCC
Confidence 5899999 999999999999877 65 45444441 22111 111110 0111 0123678999
Q ss_pred CCEEEEeec
Q 013877 179 SDLVLLLIS 187 (434)
Q Consensus 179 ADiViLavp 187 (434)
||+||++..
T Consensus 71 aDvVi~~ag 79 (303)
T 1o6z_A 71 SDVVVITAG 79 (303)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEcCC
Confidence 999999975
No 333
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=94.77 E-value=0.14 Score=51.35 Aligned_cols=70 Identities=19% Similarity=0.149 Sum_probs=51.7
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----chhHH----HHHHcC--ccccCCCcCCHHh
Q 013877 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (434)
Q Consensus 107 ~~~g~kkIgIIG~G--~mG~A~A~nLrds~~~~~~G~~Vivg~r~~----~~s~~----~A~~~G--~~~~~~~~~~~~E 174 (434)
.|+| .||++||=| +++.|++..+..- |.+|.+...+. ....+ .|++.| +.. ..+++|
T Consensus 152 ~l~g-l~va~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 220 (335)
T 1dxh_A 152 PLHD-ISYAYLGDARNNMGNSLLLIGAKL------GMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTL----TEDPKE 220 (335)
T ss_dssp CGGG-CEEEEESCCSSHHHHHHHHHHHHT------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEE----ESCHHH
T ss_pred CcCC-eEEEEecCCccchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEE----EeCHHH
Confidence 5788 999999986 9999999999887 99887765432 12222 333667 332 568999
Q ss_pred hhccCCEEEEeec
Q 013877 175 TISGSDLVLLLIS 187 (434)
Q Consensus 175 a~~~ADiViLavp 187 (434)
++++||+|+..+=
T Consensus 221 av~~aDvvytd~w 233 (335)
T 1dxh_A 221 AVKGVDFVHTDVW 233 (335)
T ss_dssp HTTTCSEEEECCC
T ss_pred HhCCCCEEEeCCc
Confidence 9999999998543
No 334
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=94.66 E-value=0.073 Score=54.92 Aligned_cols=68 Identities=22% Similarity=0.203 Sum_probs=48.8
Q ss_pred CCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 109 NGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A-~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
..+++|.|||+|-.|.+ +|+-|.+. |++|.+.+...+...+..++.|+....+ .+. +.++.+|+|++.
T Consensus 16 ~~~~~i~viG~G~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~~g--~~~-~~~~~a~~vv~s 84 (475)
T 1p3d_A 16 RRVQQIHFIGIGGAGMSGIAEILLNE------GYQISGSDIADGVVTQRLAQAGAKIYIG--HAE-EHIEGASVVVVS 84 (475)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHH------TCEEEEEESCCSHHHHHHHHTTCEEEES--CCG-GGGTTCSEEEEC
T ss_pred ccCCEEEEEeecHHHHHHHHHHHHhC------CCEEEEECCCCCHHHHHHHhCCCEEECC--CCH-HHcCCCCEEEEC
Confidence 44589999999999997 99999998 9998877765444344555678764211 122 456789998874
No 335
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.64 E-value=0.04 Score=52.88 Aligned_cols=74 Identities=20% Similarity=0.167 Sum_probs=49.8
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc----CccccCCCcCC---HHhhhccC
Q 013877 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GFTEENGTLGD---IYETISGS 179 (434)
Q Consensus 108 ~~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~----G~~~~~~~~~~---~~Ea~~~A 179 (434)
++| +++.|+| .|-+|.+++..|.+. |.+|++.+|+.++..+.+.+. ++......+.+ ..+++++.
T Consensus 117 l~g-k~vlVtGaaGGiG~aia~~L~~~------G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 189 (287)
T 1lu9_A 117 VKG-KKAVVLAGTGPVGMRSAALLAGE------GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGA 189 (287)
T ss_dssp CTT-CEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTC
T ss_pred CCC-CEEEEECCCcHHHHHHHHHHHHC------cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhC
Confidence 678 9999999 999999999999998 998888888644433333221 21100000222 34567778
Q ss_pred CEEEEeecc
Q 013877 180 DLVLLLISD 188 (434)
Q Consensus 180 DiViLavpd 188 (434)
|+||.+++.
T Consensus 190 DvlVn~ag~ 198 (287)
T 1lu9_A 190 HFVFTAGAI 198 (287)
T ss_dssp SEEEECCCT
T ss_pred CEEEECCCc
Confidence 888888864
No 336
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=94.64 E-value=0.18 Score=50.07 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=51.2
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC----chhHH----HHHHcCccccCCCcCCHHhhhc
Q 013877 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLGDIYETIS 177 (434)
Q Consensus 107 ~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~----~~s~~----~A~~~G~~~~~~~~~~~~Ea~~ 177 (434)
.|+| .||++||= +++..|++..+..- |.+|.+...++ ....+ .|++.|.... ...+++|+++
T Consensus 152 ~l~g-l~va~vGD~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~--~~~d~~eav~ 222 (315)
T 1pvv_A 152 TIKG-VKVVYVGDGNNVAHSLMIAGTKL------GADVVVATPEGYEPDEKVIKWAEQNAAESGGSFE--LLHDPVKAVK 222 (315)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EESCHHHHTT
T ss_pred CcCC-cEEEEECCCcchHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEE--EEeCHHHHhC
Confidence 5788 99999997 79999999999887 99887765432 12222 2336673210 1568999999
Q ss_pred cCCEEEEee
Q 013877 178 GSDLVLLLI 186 (434)
Q Consensus 178 ~ADiViLav 186 (434)
+||+|+..+
T Consensus 223 ~aDvvy~~~ 231 (315)
T 1pvv_A 223 DADVIYTDV 231 (315)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEcc
Confidence 999999854
No 337
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.63 E-value=0.046 Score=50.21 Aligned_cols=95 Identities=12% Similarity=0.168 Sum_probs=56.6
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCchhHHHHHHcCccccCCCcCC---HHhhhccCCEEEEe
Q 013877 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLL 185 (434)
Q Consensus 111 ~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~---~~Ea~~~ADiViLa 185 (434)
||+|.|.| .|-+|.++++.|.+. | ++|++..|..++..+ ....++......+.+ +.++++++|+||.+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~------G~~~V~~~~R~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~ 95 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADK------QTIKQTLFARQPAKIHK-PYPTNSQIIMGDVLNHAALKQAMQGQDIVYAN 95 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC------TTEEEEEEESSGGGSCS-SCCTTEEEEECCTTCHHHHHHHHTTCSEEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhC------CCceEEEEEcChhhhcc-cccCCcEEEEecCCCHHHHHHHhcCCCEEEEc
Confidence 38899999 699999999999998 9 888877776433211 111122110111233 45678899999988
Q ss_pred ecchHHHHHHHHHHhcC---CCCcEEEEec
Q 013877 186 ISDAAQADNYEKIFSCM---KPNSILGLSH 212 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~L---k~g~iL~~s~ 212 (434)
..........+.+.+.+ +.+.+|.+++
T Consensus 96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 96 LTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp CCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 77544332233343333 2344554543
No 338
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=94.48 E-value=0.091 Score=51.81 Aligned_cols=69 Identities=14% Similarity=0.171 Sum_probs=43.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCc-------EEEEEecCC----ch-hHHHHH--HcC-cccc-C-CCcCCHH
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKVGLRKG----SR-SFAEAR--AAG-FTEE-N-GTLGDIY 173 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~-------~Vivg~r~~----~~-s~~~A~--~~G-~~~~-~-~~~~~~~ 173 (434)
+||+|||. |.+|.+++..|... |+ +|.+ .+.+ .. ....+. ..+ +... + ....+..
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~------~~~~~~~~~ev~l-~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~ 78 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG------DMLGKDQPVILQL-LEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPM 78 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT------TTTCTTCCEEEEE-ECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCcCCCCCCEEEE-EcCCCccccccchhhHHHHhhhcccccCcEEEecCcH
Confidence 69999997 99999999999887 64 5554 4443 21 111111 122 1100 0 0024678
Q ss_pred hhhccCCEEEEeec
Q 013877 174 ETISGSDLVLLLIS 187 (434)
Q Consensus 174 Ea~~~ADiViLavp 187 (434)
+++++||+||++..
T Consensus 79 ~al~~aD~Vi~~ag 92 (329)
T 1b8p_A 79 TAFKDADVALLVGA 92 (329)
T ss_dssp HHTTTCSEEEECCC
T ss_pred HHhCCCCEEEEeCC
Confidence 89999999998854
No 339
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.44 E-value=0.1 Score=49.08 Aligned_cols=82 Identities=23% Similarity=0.286 Sum_probs=53.0
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchh--HHHH------HHcCccccCCCcCC---HHhhhcc
Q 013877 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS--FAEA------RAAGFTEENGTLGD---IYETISG 178 (434)
Q Consensus 111 ~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s--~~~A------~~~G~~~~~~~~~~---~~Ea~~~ 178 (434)
+++|.|+|. |.+|.++++.|.+. |++|++..|..+.. .+++ ...|+....+.+.+ +.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 77 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL------GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKN 77 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC------CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcC
Confidence 378999996 99999999999998 99887777753221 1111 22354321111333 4567889
Q ss_pred CCEEEEeecch---HHHHHHHHH
Q 013877 179 SDLVLLLISDA---AQADNYEKI 198 (434)
Q Consensus 179 ADiViLavpd~---a~~~vl~eI 198 (434)
+|+||.+.... .+..+++..
T Consensus 78 ~d~vi~~a~~~~~~~~~~l~~aa 100 (308)
T 1qyc_A 78 VDVVISTVGSLQIESQVNIIKAI 100 (308)
T ss_dssp CSEEEECCCGGGSGGGHHHHHHH
T ss_pred CCEEEECCcchhhhhHHHHHHHH
Confidence 99999998753 234455443
No 340
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.41 E-value=0.079 Score=55.17 Aligned_cols=69 Identities=17% Similarity=0.165 Sum_probs=51.5
Q ss_pred CCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe--ec
Q 013877 111 INQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL--IS 187 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A-~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa--vp 187 (434)
+++|.|||.|-.|.+ +|+-|++. |++|.+.+...+...+..++.|+... .....+.+.++|+||+. +|
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~---~g~~~~~~~~~d~vV~Spgi~ 92 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANE------GYQISGSDLAPNSVTQHLTALGAQIY---FHHRPENVLDASVVVVSTAIS 92 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT------TCEEEEECSSCCHHHHHHHHTTCEEE---SSCCGGGGTTCSEEEECTTSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHCCCEEE---CCCCHHHcCCCCEEEECCCCC
Confidence 489999999999996 89999999 99998777665555566667787642 22233456789999985 55
Q ss_pred c
Q 013877 188 D 188 (434)
Q Consensus 188 d 188 (434)
+
T Consensus 93 ~ 93 (494)
T 4hv4_A 93 A 93 (494)
T ss_dssp T
T ss_pred C
Confidence 4
No 341
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=94.14 E-value=0.091 Score=52.13 Aligned_cols=93 Identities=13% Similarity=0.071 Sum_probs=52.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC--cEEE-EEecCCchhHH------HHH---HcCccccCCCcC---CHHhhh
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVK-VGLRKGSRSFA------EAR---AAGFTEENGTLG---DIYETI 176 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G--~~Vi-vg~r~~~~s~~------~A~---~~G~~~~~~~~~---~~~Ea~ 176 (434)
.||||||+|.+|..++..|.+.-+....| ++|+ |.++...+..+ .+. ..++.. ... +.++++
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~ll 83 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDS---LEYESISASEAL 83 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGG---CCSEECCHHHHH
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCccc---ccCCCCCHHHHh
Confidence 47999999999999999997651101112 4443 33333222111 111 123210 023 777776
Q ss_pred -ccCCEEEEeecch----HHHHHHHHHHhcCCCCcEEEE
Q 013877 177 -SGSDLVLLLISDA----AQADNYEKIFSCMKPNSILGL 210 (434)
Q Consensus 177 -~~ADiViLavpd~----a~~~vl~eI~~~Lk~g~iL~~ 210 (434)
.+.|+|+.|+|.. .+.+++.+ .|+.|+-|+.
T Consensus 84 ~~~iDvVv~~t~~~~~~~~~~~~~~~---AL~aGkhVvt 119 (331)
T 3c8m_A 84 ARDFDIVVDATPASADGKKELAFYKE---TFENGKDVVT 119 (331)
T ss_dssp HSSCSEEEECSCCCSSSHHHHHHHHH---HHHTTCEEEE
T ss_pred CCCCCEEEECCCCCCccchHHHHHHH---HHHCCCeEEe
Confidence 3689999999985 44445443 3556776653
No 342
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.11 E-value=0.35 Score=48.42 Aligned_cols=95 Identities=18% Similarity=0.169 Sum_probs=61.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhhc------cCC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~~------~AD 180 (434)
.| .+|.|+|.|.+|...++-++.. |. +|+ ..+.+++..+.+++.|.... +....+..+.+. ..|
T Consensus 213 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi-~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 213 PG-DNVVILGGGPIGLAAVAILKHA------GASKVI-LSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEE-EECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEE-EECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCC
Confidence 45 8999999999999999988888 98 665 44444566788888886421 111123333332 589
Q ss_pred EEEEeecch--HHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDA--AQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~--a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+||-++... .....++-+...++++-.++..
T Consensus 285 ~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 285 LFLEATGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred EEEECCCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 999999876 2223333333444777666544
No 343
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.06 E-value=0.34 Score=47.80 Aligned_cols=91 Identities=19% Similarity=0.187 Sum_probs=59.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCcccc-CCCc--CCHHhhhc-----cC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~~~--~~~~Ea~~-----~A 179 (434)
.| .+|.|+|.|.+|...++-++.. |. +|++. ..+++..+.+++.|.... +... .+..+.+. ..
T Consensus 191 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~-~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 191 PG-STCAVFGLGGVGFSAIVGCKAA------GASRIIGV-GTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEE-CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEE-CCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCC
Confidence 46 8999999999999999988887 87 66544 444556788888886420 1000 12333332 57
Q ss_pred CEEEEeecchHHHHHHHHHHhcCCCC-cEEEE
Q 013877 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGL 210 (434)
Q Consensus 180 DiViLavpd~a~~~vl~eI~~~Lk~g-~iL~~ 210 (434)
|+||-++... +.++.....++++ -.++.
T Consensus 263 Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~ 291 (373)
T 1p0f_A 263 DYAVECAGRI---ETMMNALQSTYCGSGVTVV 291 (373)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEE
T ss_pred CEEEECCCCH---HHHHHHHHHHhcCCCEEEE
Confidence 9999998752 2344555677776 55543
No 344
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=94.05 E-value=0.21 Score=50.51 Aligned_cols=70 Identities=16% Similarity=0.164 Sum_probs=51.7
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----chhHH----HHHHcC--ccccCCCcCCHHh
Q 013877 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (434)
Q Consensus 107 ~~~g~kkIgIIG~G--~mG~A~A~nLrds~~~~~~G~~Vivg~r~~----~~s~~----~A~~~G--~~~~~~~~~~~~E 174 (434)
.|+| .||++||=| +++.|++..+..- |.+|.+..... ....+ .|++.| +.. +.+++|
T Consensus 173 ~l~g-l~va~vGD~~~rva~Sl~~~~~~l------G~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 241 (359)
T 2w37_A 173 KLQG-LTLTFMGDGRNNVANSLLVTGAIL------GVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVI----TDDLDE 241 (359)
T ss_dssp CCTT-CEEEEESCTTSHHHHHHHHHHHHH------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEE----ESCHHH
T ss_pred CcCC-eEEEEECCCccchHHHHHHHHHHc------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EeCHHH
Confidence 5788 999999986 9999999999887 99887765431 12222 233566 332 568999
Q ss_pred hhccCCEEEEeec
Q 013877 175 TISGSDLVLLLIS 187 (434)
Q Consensus 175 a~~~ADiViLavp 187 (434)
++++||+|+..+=
T Consensus 242 av~~aDvvytd~w 254 (359)
T 2w37_A 242 GLKGSNVVYTDVW 254 (359)
T ss_dssp HHTTCSEEEECCS
T ss_pred HhcCCCEEEEccc
Confidence 9999999998553
No 345
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.00 E-value=0.15 Score=48.42 Aligned_cols=81 Identities=20% Similarity=0.148 Sum_probs=53.3
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHH---HHHcCccccCCCcCC---HHhhhccCCEEEE
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE---ARAAGFTEENGTLGD---IYETISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~---A~~~G~~~~~~~~~~---~~Ea~~~ADiViL 184 (434)
++|.|+|. |.+|.++++.|.+. |++|++..|..+...+. ....|+....+.+.+ +.++++++|+||.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~ 85 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL------GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVIS 85 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHC------CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 58999995 99999999999998 99888777764322221 123454321111333 4567889999999
Q ss_pred eecch---HHHHHHHHH
Q 013877 185 LISDA---AQADNYEKI 198 (434)
Q Consensus 185 avpd~---a~~~vl~eI 198 (434)
+.... .+..+++..
T Consensus 86 ~a~~~~~~~~~~l~~aa 102 (318)
T 2r6j_A 86 ALAFPQILDQFKILEAI 102 (318)
T ss_dssp CCCGGGSTTHHHHHHHH
T ss_pred CCchhhhHHHHHHHHHH
Confidence 98753 234455443
No 346
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.96 E-value=0.14 Score=46.02 Aligned_cols=69 Identities=16% Similarity=0.196 Sum_probs=47.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC----HHhhhccCCEEEEee
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD----IYETISGSDLVLLLI 186 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~----~~Ea~~~ADiViLav 186 (434)
|||.|+| .|.+|.++++.|.+. |++|++..|..++.... .++......+.+ +.+++++.|+||.+.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT------DYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS------SCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 4899999 899999999999998 99988877764432111 222111111333 456778899999998
Q ss_pred cch
Q 013877 187 SDA 189 (434)
Q Consensus 187 pd~ 189 (434)
...
T Consensus 72 g~~ 74 (219)
T 3dqp_A 72 GSG 74 (219)
T ss_dssp CCT
T ss_pred cCC
Confidence 754
No 347
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.87 E-value=0.28 Score=46.55 Aligned_cols=75 Identities=21% Similarity=0.161 Sum_probs=48.5
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH------cCcc---ccCCC-cCCHHh
Q 013877 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA------AGFT---EENGT-LGDIYE 174 (434)
Q Consensus 106 ~~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~------~G~~---~~~~~-~~~~~E 174 (434)
..+++ ++|.|.|. |-+|.++++.|.+. |++|++..|...+....... .++. ..|-+ ..++.+
T Consensus 7 ~~~~~-~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~ 79 (342)
T 1y1p_A 7 VLPEG-SLVLVTGANGFVASHVVEQLLEH------GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE 79 (342)
T ss_dssp SSCTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT
T ss_pred cCCCC-CEEEEECCccHHHHHHHHHHHHC------CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHH
Confidence 45677 99999997 99999999999998 99988777753322111111 1221 11100 123456
Q ss_pred hhccCCEEEEeec
Q 013877 175 TISGSDLVLLLIS 187 (434)
Q Consensus 175 a~~~ADiViLavp 187 (434)
++++.|+||.+..
T Consensus 80 ~~~~~d~vih~A~ 92 (342)
T 1y1p_A 80 VIKGAAGVAHIAS 92 (342)
T ss_dssp TTTTCSEEEECCC
T ss_pred HHcCCCEEEEeCC
Confidence 6778999998864
No 348
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.84 E-value=0.092 Score=55.02 Aligned_cols=89 Identities=17% Similarity=0.146 Sum_probs=56.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC--HHhhhccCCEEEEeecch
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD--IYETISGSDLVLLLISDA 189 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~--~~Ea~~~ADiViLavpd~ 189 (434)
++|.|||+|..|..+|+.|.+. |++|++.+....+ .+.+. -+...|.+-.+ .+.-+++||.+++++++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~d~~~-~~~~~--~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d 419 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK------PVPFILIDRQESP-VCNDH--VVVYGDATVGQTLRQAGIDRASGIIVTTNDD 419 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCS-SCCSS--CEEESCSSSSTHHHHHTTTSCSEEEECCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHC------CCCEEEEECChHH-HhhcC--CEEEeCCCCHHHHHhcCccccCEEEEECCCc
Confidence 6799999999999999999998 9988776654333 22221 22222222122 123478999999999987
Q ss_pred HHHHHHHHHHhcCCCC-cEEE
Q 013877 190 AQADNYEKIFSCMKPN-SILG 209 (434)
Q Consensus 190 a~~~vl~eI~~~Lk~g-~iL~ 209 (434)
...-+.-.++..+.+. .+|.
T Consensus 420 ~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 420 STNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp HHHHHHHHHHHHHCSSSEEEE
T ss_pred hHHHHHHHHHHHHCCCCEEEE
Confidence 5443333444555555 4444
No 349
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.82 E-value=0.058 Score=53.87 Aligned_cols=89 Identities=13% Similarity=0.099 Sum_probs=51.7
Q ss_pred CEEEEEcccchHHHHHHHHHhh---hhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecc
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDS---LAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds---~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd 188 (434)
.||||||+|.+|..+++.|.+. +...|.+++++...+.+.. ++ .++.. .....|.++++ +.|+|+.|+|.
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~---~~--~~~~~-~~~~~d~~~ll-~iDvVve~t~~ 76 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPR---KP--RAIPQ-ELLRAEPFDLL-EADLVVEAMGG 76 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTT---SC--CSSCG-GGEESSCCCCT-TCSEEEECCCC
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHH---Hh--hccCc-ccccCCHHHHh-CCCEEEECCCC
Confidence 4799999999999999999775 1111113444333332211 11 12211 11135677777 89999999997
Q ss_pred hHH-HHHHHHHHhcCCCCcEEEE
Q 013877 189 AAQ-ADNYEKIFSCMKPNSILGL 210 (434)
Q Consensus 189 ~a~-~~vl~eI~~~Lk~g~iL~~ 210 (434)
..+ .+...+ .|+.|+-|+.
T Consensus 77 ~~~a~~~~~~---AL~aGKhVVt 96 (332)
T 2ejw_A 77 VEAPLRLVLP---ALEAGIPLIT 96 (332)
T ss_dssp SHHHHHHHHH---HHHTTCCEEE
T ss_pred cHHHHHHHHH---HHHcCCeEEE
Confidence 644 344433 3456665543
No 350
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.81 E-value=0.28 Score=43.83 Aligned_cols=70 Identities=20% Similarity=0.119 Sum_probs=46.2
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC-HHhhhccCCEEEEeecc
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETISGSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~-~~Ea~~~ADiViLavpd 188 (434)
|||.|+|. |.+|.++++.|.+. |++|++..|...+ .......++......+.+ ..+++++.|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR------GHEVLAVVRDPQK-AADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC------CCEEEEEEecccc-cccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 57999997 99999999999999 9998877775332 222222333211000111 11678899999998854
No 351
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.79 E-value=0.17 Score=47.50 Aligned_cols=81 Identities=19% Similarity=0.174 Sum_probs=52.6
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC-c-----hhHHH---HHHcCccccCCCcCC---HHhhhcc
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-S-----RSFAE---ARAAGFTEENGTLGD---IYETISG 178 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~-~-----~s~~~---A~~~G~~~~~~~~~~---~~Ea~~~ 178 (434)
++|.|+|. |.+|.++++.|.+. |++|++..|.. . ...+. ....|+......+.+ +.+++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 76 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKA------GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQ 76 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHH------TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred cEEEEECCCchHHHHHHHHHHhC------CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhC
Confidence 88999996 99999999999998 99888777764 1 11111 123454321111233 4567889
Q ss_pred CCEEEEeecch---HHHHHHHHH
Q 013877 179 SDLVLLLISDA---AQADNYEKI 198 (434)
Q Consensus 179 ADiViLavpd~---a~~~vl~eI 198 (434)
+|+||.+.... .+..+++..
T Consensus 77 ~d~vi~~a~~~~~~~~~~l~~aa 99 (307)
T 2gas_A 77 VDIVICAAGRLLIEDQVKIIKAI 99 (307)
T ss_dssp CSEEEECSSSSCGGGHHHHHHHH
T ss_pred CCEEEECCcccccccHHHHHHHH
Confidence 99999998753 334455443
No 352
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.78 E-value=0.13 Score=50.31 Aligned_cols=92 Identities=18% Similarity=0.178 Sum_probs=60.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCccc-cCCCcCCHHhhhc------cCC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTE-ENGTLGDIYETIS------GSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~-~~~~~~~~~Ea~~------~AD 180 (434)
.| ++|.|+|.|.+|.+.++-++.. |. +|++..+. ++..+.+++.|... .+....+..+.+. ..|
T Consensus 167 ~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 167 SG-KSVLITGAGPLGLLGIAVAKAS------GAYPVIVSEPS-DFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHT------TCCSEEEECSC-HHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCC-HHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCC
Confidence 67 8999999999999999999888 88 77655544 45567777877631 0111123333332 589
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+||-++... +.++...+.++++..++..
T Consensus 239 ~vid~~g~~---~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 239 VFLEFSGAP---KALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EEEECSCCH---HHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCCH---HHHHHHHHHHhcCCEEEEE
Confidence 999999852 2334444556666555543
No 353
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.70 E-value=0.42 Score=47.13 Aligned_cols=91 Identities=19% Similarity=0.210 Sum_probs=59.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCcccc-CCCc--CCHHhhhc-----cC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~~~--~~~~Ea~~-----~A 179 (434)
.| .+|.|+|.|.+|...++-++.. |. +|++..+ +++..+.+++.|.... +... .+..+.+. ..
T Consensus 195 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~-~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 195 PG-STCAVFGLGCVGLSAIIGCKIA------GASRIIAIDI-NGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECS-CGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcC-CHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCc
Confidence 46 8999999999999999988887 88 6655444 4555788888886420 1000 12333332 48
Q ss_pred CEEEEeecchHHHHHHHHHHhcCCCC-cEEEE
Q 013877 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGL 210 (434)
Q Consensus 180 DiViLavpd~a~~~vl~eI~~~Lk~g-~iL~~ 210 (434)
|+||-++... +.++.....++++ -.++.
T Consensus 267 Dvvid~~G~~---~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 267 DYSLDCAGTA---QTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp SEEEESSCCH---HHHHHHHHTBCTTTCEEEE
T ss_pred cEEEECCCCH---HHHHHHHHHhhcCCCEEEE
Confidence 9999998752 2344555677776 55543
No 354
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=93.69 E-value=0.065 Score=53.88 Aligned_cols=88 Identities=16% Similarity=0.168 Sum_probs=54.0
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC-----c-EEEEEecCC--chhHHHH----HH-cCccccCCCcCCHHhhhc
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-----I-VVKVGLRKG--SRSFAEA----RA-AGFTEENGTLGDIYETIS 177 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G-----~-~Vivg~r~~--~~s~~~A----~~-~G~~~~~~~~~~~~Ea~~ 177 (434)
+||+||| .|.+|..+.+.|.+. + . +++...+.. .+..... .. ...... ..+. +.+.
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~------~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~---~~~~-~~~~ 79 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGH------PAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE---PTEA-AVLG 79 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC------HHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE---ECCH-HHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHcC------CCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec---cCCH-HHhc
Confidence 7999999 999999999999876 5 3 544433221 1211110 00 011110 1232 4456
Q ss_pred cCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 178 ~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
++|+||+|+|.....++.+.+ +.|..+++.++
T Consensus 80 ~~DvVf~alg~~~s~~~~~~~----~~G~~vIDlSa 111 (352)
T 2nqt_A 80 GHDAVFLALPHGHSAVLAQQL----SPETLIIDCGA 111 (352)
T ss_dssp TCSEEEECCTTSCCHHHHHHS----CTTSEEEECSS
T ss_pred CCCEEEECCCCcchHHHHHHH----hCCCEEEEECC
Confidence 899999999988777666544 46777776655
No 355
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=93.64 E-value=0.19 Score=49.62 Aligned_cols=71 Identities=23% Similarity=0.180 Sum_probs=41.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH--cC-c--cccCCCc-CCHHhhhccCCEEEE
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA--AG-F--TEENGTL-GDIYETISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~--~G-~--~~~~~~~-~~~~Ea~~~ADiViL 184 (434)
+||+||| .|.+|.+++..|.... +...++.+.+.. .+....+.+ +. . .. .+.. .+..+++++||+||+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~---~~~~el~L~Di~-~~~~G~a~Dl~~~~~~~~v-~~~~~~~~~~~~~~aDivii 75 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQL---PSGSELSLYDIA-PVTPGVAVDLSHIPTAVKI-KGFSGEDATPALEGADVVLI 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHS---CTTEEEEEECSS-TTHHHHHHHHHTSCSSEEE-EEECSSCCHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CCCceEEEEecC-CCchhHHHHhhCCCCCceE-EEecCCCcHHHhCCCCEEEE
Confidence 5899999 8999999999987530 012355444443 222222222 11 1 11 0000 245678999999999
Q ss_pred eec
Q 013877 185 LIS 187 (434)
Q Consensus 185 avp 187 (434)
+..
T Consensus 76 ~ag 78 (312)
T 3hhp_A 76 SAG 78 (312)
T ss_dssp CCS
T ss_pred eCC
Confidence 873
No 356
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=93.63 E-value=0.15 Score=50.56 Aligned_cols=69 Identities=22% Similarity=0.249 Sum_probs=51.3
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----chhHH----HHHHcC--ccccCCCcCCHHh
Q 013877 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (434)
Q Consensus 107 ~~~g~kkIgIIG~G--~mG~A~A~nLrds~~~~~~G~~Vivg~r~~----~~s~~----~A~~~G--~~~~~~~~~~~~E 174 (434)
.|+| .||++||=| ++..|++..+..- |.+|.+...++ ..-.+ .|++.| +.. ..+++|
T Consensus 145 ~l~g-l~va~vGD~~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~----~~d~~e 213 (307)
T 2i6u_A 145 ALRG-LRLSYFGDGANNMAHSLLLGGVTA------GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTV----TADAHA 213 (307)
T ss_dssp CCTT-CEEEEESCTTSHHHHHHHHHHHHT------TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEE----ESCHHH
T ss_pred CcCC-eEEEEECCCCcCcHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EECHHH
Confidence 5788 999999986 9999999999887 99887765432 11222 233566 332 568999
Q ss_pred hhccCCEEEEee
Q 013877 175 TISGSDLVLLLI 186 (434)
Q Consensus 175 a~~~ADiViLav 186 (434)
++++||+|+..+
T Consensus 214 av~~aDvvy~~~ 225 (307)
T 2i6u_A 214 AAAGADVLVTDT 225 (307)
T ss_dssp HHTTCSEEEECC
T ss_pred HhcCCCEEEecc
Confidence 999999999854
No 357
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=93.58 E-value=0.15 Score=50.97 Aligned_cols=72 Identities=11% Similarity=0.089 Sum_probs=51.5
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----chhHH----HHHHcCccccCCCcCCHHhhh
Q 013877 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLGDIYETI 176 (434)
Q Consensus 107 ~~~g~kkIgIIG~G--~mG~A~A~nLrds~~~~~~G~~Vivg~r~~----~~s~~----~A~~~G~~~~~~~~~~~~Ea~ 176 (434)
.|+| .||++||=| ++..|++..+..- |.+|.+...++ ....+ .|++.|.... ...+++|++
T Consensus 164 ~l~g-l~va~vGD~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~eav 234 (325)
T 1vlv_A 164 RLKG-VKVVFMGDTRNNVATSLMIACAKM------GMNFVACGPEELKPRSDVFKRCQEIVKETDGSVS--FTSNLEEAL 234 (325)
T ss_dssp CSTT-CEEEEESCTTSHHHHHHHHHHHHT------TCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEE--EESCHHHHH
T ss_pred CcCC-cEEEEECCCCcCcHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEE--EEcCHHHHH
Confidence 5788 999999986 9999999999887 99887765432 12222 3336673210 156899999
Q ss_pred ccCCEEEEeec
Q 013877 177 SGSDLVLLLIS 187 (434)
Q Consensus 177 ~~ADiViLavp 187 (434)
++||+|+..+=
T Consensus 235 ~~aDvvyt~~w 245 (325)
T 1vlv_A 235 AGADVVYTDVW 245 (325)
T ss_dssp TTCSEEEECCC
T ss_pred ccCCEEEeccc
Confidence 99999998543
No 358
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.57 E-value=0.43 Score=47.06 Aligned_cols=91 Identities=19% Similarity=0.212 Sum_probs=60.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCcccc-CCCc--CCHHhhhc-----cC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~~~--~~~~Ea~~-----~A 179 (434)
.| ++|.|+|.|.+|...++-++.. |. +|++..+ +++..+.+++.|.... +... .+..+.+. ..
T Consensus 192 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 192 PG-STCAVFGLGAVGLAAVMGCHSA------GAKRIIAVDL-NPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECS-CGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEcC-CHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCC
Confidence 46 8999999999999999988887 88 6654444 4556778888886320 1000 12333333 47
Q ss_pred CEEEEeecchHHHHHHHHHHhcCCCC-cEEEE
Q 013877 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGL 210 (434)
Q Consensus 180 DiViLavpd~a~~~vl~eI~~~Lk~g-~iL~~ 210 (434)
|+||-++... +.++.....++++ -.++.
T Consensus 264 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 264 DFSLECVGNV---GVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEE
T ss_pred CEEEECCCCH---HHHHHHHHHhhcCCcEEEE
Confidence 9999998753 2344555677776 55543
No 359
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.57 E-value=0.38 Score=46.60 Aligned_cols=94 Identities=17% Similarity=0.117 Sum_probs=62.0
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhh------ccCC
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~------~~AD 180 (434)
..| ++|.|+|.|.+|...++-++.. |..+++..+.+++..+.+++.|.... +....+..+.+ ...|
T Consensus 159 ~~g-~~VlV~GaG~vG~~aiq~ak~~------G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CEN-KNVIIIGAGTIGLLAIQCAVAL------GAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTT-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSE
T ss_pred CCC-CEEEEECCCCcchHHHHHHHHc------CCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcc
Confidence 356 8999999999999999988888 87665555555666789999996421 11112333332 2468
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+|+-++.... .++.....++++..+++.
T Consensus 232 ~v~d~~G~~~---~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 232 LILETAGVPQ---TVELAVEIAGPHAQLALV 259 (346)
T ss_dssp EEEECSCSHH---HHHHHHHHCCTTCEEEEC
T ss_pred cccccccccc---hhhhhhheecCCeEEEEE
Confidence 8888886432 334444567777766544
No 360
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.48 E-value=0.22 Score=43.64 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=46.7
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC---HHhhhccCCEEEEeec
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~---~~Ea~~~ADiViLavp 187 (434)
|+|.|+|. |.+|.++++.|.+. |++|++..|...+... ....++......+.+ +.++++++|+||.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~------g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA------GYEVTVLVRDSSRLPS-EGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCGGGSCS-SSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC------CCeEEEEEeChhhccc-ccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 78999997 99999999999998 9998877775432211 001222110111223 4467888999999876
Q ss_pred c
Q 013877 188 D 188 (434)
Q Consensus 188 d 188 (434)
.
T Consensus 77 ~ 77 (206)
T 1hdo_A 77 T 77 (206)
T ss_dssp C
T ss_pred C
Confidence 4
No 361
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=93.48 E-value=0.16 Score=50.30 Aligned_cols=77 Identities=17% Similarity=0.261 Sum_probs=58.6
Q ss_pred ccCCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 107 AFNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 107 ~~~g~kkIgIIG~G-~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
.++| |++.|||-+ ..|..+|.-|.+. +..|.+.... ..++.+.+++||+||.+
T Consensus 176 ~l~G-k~vvViGRS~iVGkPla~LL~~~------~ATVTi~Hs~-------------------T~dl~~~~~~ADIvV~A 229 (303)
T 4b4u_A 176 EIAG-KHAVVVGRSAILGKPMAMMLLQA------NATVTICHSR-------------------TQNLPELVKQADIIVGA 229 (303)
T ss_dssp CCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHHTCSEEEEC
T ss_pred CCCC-CEEEEEeccccccchHHHHHHhc------CCEEEEecCC-------------------CCCHHHHhhcCCeEEec
Confidence 6889 999999977 6799999999887 8787765432 24677889999999999
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEEEeccch
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~~s~G~~ 215 (434)
+.-... +. ..++|+|++|+++ |++
T Consensus 230 ~G~p~~---i~--~d~vk~GavVIDV-Gin 253 (303)
T 4b4u_A 230 VGKAEL---IQ--KDWIKQGAVVVDA-GFH 253 (303)
T ss_dssp SCSTTC---BC--GGGSCTTCEEEEC-CCB
T ss_pred cCCCCc---cc--cccccCCCEEEEe-cee
Confidence 874322 21 3468999999886 443
No 362
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=93.47 E-value=0.17 Score=52.41 Aligned_cols=68 Identities=15% Similarity=0.127 Sum_probs=48.5
Q ss_pred CCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEe
Q 013877 109 NGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A-~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
+.+++|.|||+|-.|.+ +|+-|.+. |++|.+.+...+...+..++.|+....+ .+. +.++.+|+||+.
T Consensus 17 ~~~~~v~viGiG~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~~g--~~~-~~~~~a~~vv~s 85 (491)
T 2f00_A 17 RRVRHIHFVGIGGAGMGGIAEVLANE------GYQISGSDLAPNPVTQQLMNLGATIYFN--HRP-ENVRDASVVVVS 85 (491)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHT------TCEEEEECSSCCHHHHHHHHTTCEEESS--CCG-GGGTTCSEEEEC
T ss_pred ccCCEEEEEEcCHHHHHHHHHHHHhC------CCeEEEECCCCCHHHHHHHHCCCEEECC--CCH-HHcCCCCEEEEC
Confidence 34489999999999997 99999998 9998876665444344555678764222 122 446789998884
No 363
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.45 E-value=0.097 Score=51.70 Aligned_cols=93 Identities=17% Similarity=0.210 Sum_probs=61.7
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc--hhHHHHHHcCccccCCCcCCHHhhh----ccCC
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDIYETI----SGSD 180 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~--~s~~~A~~~G~~~~~~~~~~~~Ea~----~~AD 180 (434)
.++| ++|.|+|.|.+|...++-++.. |.+|++..+... +..+.+++.|....+ .. +..+.+ ...|
T Consensus 178 ~~~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 178 TLNC-RKVLVVGTGPIGVLFTLLFRTY------GLEVWMANRREPTEVEQTVIEETKTNYYN-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp SSTT-CEEEEESCHHHHHHHHHHHHHH------TCEEEEEESSCCCHHHHHHHHHHTCEEEE-CT-TCSHHHHHHHCCEE
T ss_pred cCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCccchHHHHHHHHhCCceec-hH-HHHHHHHHhCCCCC
Confidence 3558 9999999999999999999988 988877666540 345777777865311 11 222222 3589
Q ss_pred EEEEeecchHHHHHH-HHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNY-EKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl-~eI~~~Lk~g~iL~~s 211 (434)
+||-++.... .+ +...+.|+++..++..
T Consensus 249 ~vid~~g~~~---~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 249 VIIDATGADV---NILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEECCCCCT---HHHHHHGGGEEEEEEEEEC
T ss_pred EEEECCCChH---HHHHHHHHHHhcCCEEEEE
Confidence 9999988542 23 4555667776555433
No 364
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=93.42 E-value=0.23 Score=49.63 Aligned_cols=92 Identities=15% Similarity=0.148 Sum_probs=53.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC--CchhHHHHH----HcCc-----cc--cC------C---C-
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEAR----AAGF-----TE--EN------G---T- 168 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~--~~~s~~~A~----~~G~-----~~--~~------~---~- 168 (434)
.||||+|+|.+|.-+++.|.+. .+++++..++. +........ ..|- .. .+ + .
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~-----p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v 78 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQS-----EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTV 78 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----SSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCC-----CCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEE
Confidence 4899999999999999998765 14566544442 222222221 1121 00 00 0 0
Q ss_pred c--CCHHhh---hccCCEEEEeecchHHHHHHHHHHhcCCCCc--EEEEe
Q 013877 169 L--GDIYET---ISGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLS 211 (434)
Q Consensus 169 ~--~~~~Ea---~~~ADiViLavpd~a~~~vl~eI~~~Lk~g~--iL~~s 211 (434)
. .+++++ -.++|+||.|+|.....+..... ++.|. +|+..
T Consensus 79 ~~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~---l~aGak~VVIs~ 125 (337)
T 3e5r_O 79 FGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAH---LKGGAKKVVISA 125 (337)
T ss_dssp ECCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHH---HHTTCSEEEESS
T ss_pred EecCChHHccccccCCCEEEECCCchhhHHHHHHH---HHcCCCEEEEec
Confidence 1 144443 14799999999998888776554 34565 55543
No 365
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=93.41 E-value=0.27 Score=48.74 Aligned_cols=71 Identities=14% Similarity=0.080 Sum_probs=49.8
Q ss_pred ccC-CCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC----chhHHHH----HHcCccccCCCcCCHHhhh
Q 013877 107 AFN-GINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEA----RAAGFTEENGTLGDIYETI 176 (434)
Q Consensus 107 ~~~-g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~----~~s~~~A----~~~G~~~~~~~~~~~~Ea~ 176 (434)
.|+ | .||++||= +++..|++..+..- |.+|.+...++ ....+.+ ++.|.... ...+++|++
T Consensus 142 ~l~~g-l~va~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~--~~~d~~eav 212 (307)
T 3tpf_A 142 MQNGI-AKVAFIGDSNNMCNSWLITAAIL------GFEISIAMPKNYKISPEIWEFAMKQALISGAKIS--LGYDKFEAL 212 (307)
T ss_dssp CGGGC-CEEEEESCSSHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EESCHHHHH
T ss_pred CCCCC-CEEEEEcCCCccHHHHHHHHHHc------CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEE--EEcCHHHHh
Confidence 477 8 99999995 58889999888877 88887664332 2222333 35554210 156899999
Q ss_pred ccCCEEEEee
Q 013877 177 SGSDLVLLLI 186 (434)
Q Consensus 177 ~~ADiViLav 186 (434)
+++|+|+..+
T Consensus 213 ~~aDvvyt~~ 222 (307)
T 3tpf_A 213 KDKDVVITDT 222 (307)
T ss_dssp TTCSEEEECC
T ss_pred cCCCEEEecC
Confidence 9999999877
No 366
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=93.38 E-value=0.22 Score=47.25 Aligned_cols=82 Identities=17% Similarity=0.144 Sum_probs=53.3
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC-c----hhHHH---HHHcCccccCCCcCC---HHhhhcc
Q 013877 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-S----RSFAE---ARAAGFTEENGTLGD---IYETISG 178 (434)
Q Consensus 111 ~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~-~----~s~~~---A~~~G~~~~~~~~~~---~~Ea~~~ 178 (434)
+++|.|+|. |.+|.++++.|.+. |++|++..|.. + ...+. ....|+......+.+ +.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~ 77 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF------SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQ 77 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC------CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcC
Confidence 378999995 99999999999998 99888777764 1 11111 123454221111333 4567889
Q ss_pred CCEEEEeecch---HHHHHHHHH
Q 013877 179 SDLVLLLISDA---AQADNYEKI 198 (434)
Q Consensus 179 ADiViLavpd~---a~~~vl~eI 198 (434)
+|+||.+.... .+..+++..
T Consensus 78 ~d~vi~~a~~~~~~~~~~l~~aa 100 (321)
T 3c1o_A 78 VDIVISALPFPMISSQIHIINAI 100 (321)
T ss_dssp CSEEEECCCGGGSGGGHHHHHHH
T ss_pred CCEEEECCCccchhhHHHHHHHH
Confidence 99999998753 334555543
No 367
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.38 E-value=0.11 Score=50.92 Aligned_cols=89 Identities=19% Similarity=0.240 Sum_probs=62.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecc
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd 188 (434)
.| .+|.|+|.|.+|...++-++.. |.+|++..+. ++..+.+++.|.... ..+.++..+..|+||-++..
T Consensus 176 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~v---~~~~~~~~~~~D~vid~~g~ 244 (348)
T 3two_A 176 KG-TKVGVAGFGGLGSMAVKYAVAM------GAEVSVFARN-EHKKQDALSMGVKHF---YTDPKQCKEELDFIISTIPT 244 (348)
T ss_dssp TT-CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSS-STTHHHHHHTTCSEE---ESSGGGCCSCEEEEEECCCS
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCeEEEEeCC-HHHHHHHHhcCCCee---cCCHHHHhcCCCEEEECCCc
Confidence 56 8999999999999999999888 9887655544 455788888887531 22333333478999999986
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEe
Q 013877 189 AAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
.. .++.....|+++-.++..
T Consensus 245 ~~---~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 245 HY---DLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp CC---CHHHHHTTEEEEEEEEEC
T ss_pred HH---HHHHHHHHHhcCCEEEEE
Confidence 52 233444567777666544
No 368
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.37 E-value=0.41 Score=47.17 Aligned_cols=91 Identities=21% Similarity=0.266 Sum_probs=59.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCcccc-CCCc--CCHHhhhc-----cC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~~~--~~~~Ea~~-----~A 179 (434)
.| ++|.|+|.|.+|...++-++.. |. +|++..+ +++..+.+++.|.... +... .+..+.+. ..
T Consensus 191 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 191 QG-STCAVFGLGGVGLSVIMGCKAA------GAARIIGVDI-NKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECS-CGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcC-CHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCC
Confidence 46 8999999999999999988888 88 6655444 3555778888886420 1000 12333333 47
Q ss_pred CEEEEeecchHHHHHHHHHHhcCCCC-cEEEE
Q 013877 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGL 210 (434)
Q Consensus 180 DiViLavpd~a~~~vl~eI~~~Lk~g-~iL~~ 210 (434)
|+||-++.... .++.....++++ -.++.
T Consensus 263 D~vid~~g~~~---~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 263 DFSFEVIGRLD---TMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp SEEEECSCCHH---HHHHHHHHBCTTTCEEEE
T ss_pred cEEEECCCCHH---HHHHHHHHhhcCCcEEEE
Confidence 99999997532 344445567776 55543
No 369
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.36 E-value=0.19 Score=48.50 Aligned_cols=81 Identities=16% Similarity=0.168 Sum_probs=53.6
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHH------HHHcCccccCCCcCC---HHhhhc--cC
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE------ARAAGFTEENGTLGD---IYETIS--GS 179 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~------A~~~G~~~~~~~~~~---~~Ea~~--~A 179 (434)
++|.|+|. |.+|.++++.|.+. |++|++..|..+....+ ....|+....+.+.+ +.++++ ++
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDA------HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHT------TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred CeEEEECCCcHHHHHHHHHHHHC------CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCC
Confidence 78999998 99999999999998 99988877764221111 123454321122333 456778 99
Q ss_pred CEEEEeecchHH---HHHHHHH
Q 013877 180 DLVLLLISDAAQ---ADNYEKI 198 (434)
Q Consensus 180 DiViLavpd~a~---~~vl~eI 198 (434)
|+||.+...... ..+++..
T Consensus 85 d~Vi~~a~~~n~~~~~~l~~aa 106 (346)
T 3i6i_A 85 DIVVSTVGGESILDQIALVKAM 106 (346)
T ss_dssp CEEEECCCGGGGGGHHHHHHHH
T ss_pred CEEEECCchhhHHHHHHHHHHH
Confidence 999999886432 3455443
No 370
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.33 E-value=0.21 Score=49.48 Aligned_cols=92 Identities=21% Similarity=0.224 Sum_probs=61.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhhcc--------
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETISG-------- 178 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~~~-------- 178 (434)
.| .+|.|+|.|.+|...++-++.. |. +|+ ..+.+++..+.+++.|.... +....+..+.+.+
T Consensus 182 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi-~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 182 AG-STVAILGGGVIGLLTVQLARLA------GATTVI-LSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEE-EECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEE-EECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCC
Confidence 46 8999999999999999988888 88 655 44444566788888887421 1112344444443
Q ss_pred CCEEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 179 ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
.|+||-++.... .++.....++++..++..
T Consensus 254 ~Dvvid~~G~~~---~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 254 VDVVIECAGVAE---TVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp EEEEEECSCCHH---HHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCCCHH---HHHHHHHHhccCCEEEEE
Confidence 799999988432 334444556666665544
No 371
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=93.29 E-value=0.27 Score=48.50 Aligned_cols=96 Identities=13% Similarity=0.023 Sum_probs=58.8
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc----CccccCCCcCCHHhh-hccCC
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GFTEENGTLGDIYET-ISGSD 180 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~----G~~~~~~~~~~~~Ea-~~~AD 180 (434)
..-.| ++|..||||..|.+...-.+.. |.+| ++.+.++...+.|++. |.....-...+..+. -...|
T Consensus 119 ~l~~g-~rVLDIGcG~G~~ta~~lA~~~------ga~V-~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FD 190 (298)
T 3fpf_A 119 RFRRG-ERAVFIGGGPLPLTGILLSHVY------GMRV-NVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFD 190 (298)
T ss_dssp TCCTT-CEEEEECCCSSCHHHHHHHHTT------CCEE-EEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCS
T ss_pred CCCCc-CEEEEECCCccHHHHHHHHHcc------CCEE-EEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcC
Confidence 33456 8999999998765433222223 6665 5677666666666653 431000001233332 14579
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEE
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~ 209 (434)
+|++..-.....++++++...||||..|+
T Consensus 191 vV~~~a~~~d~~~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 191 VLMVAALAEPKRRVFRNIHRYVDTETRII 219 (298)
T ss_dssp EEEECTTCSCHHHHHHHHHHHCCTTCEEE
T ss_pred EEEECCCccCHHHHHHHHHHHcCCCcEEE
Confidence 99987654455678999999999998765
No 372
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.21 E-value=0.27 Score=48.26 Aligned_cols=44 Identities=16% Similarity=0.085 Sum_probs=30.5
Q ss_pred CccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEec
Q 013877 98 RDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (434)
Q Consensus 98 ~~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r 148 (434)
+|.+..+.+.|++ .+|.|||+|-.|..++++|..+ |+ ++.+.++
T Consensus 24 ~~G~~~~q~kL~~-~~VlVvGaGGlGs~va~~La~a------GVG~i~lvD~ 68 (292)
T 3h8v_A 24 RMGIVSDYEKIRT-FAVAIVGVGGVGSVTAEMLTRC------GIGKLLLFDY 68 (292)
T ss_dssp --------CGGGG-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECC
T ss_pred ccChHHHHHHHhC-CeEEEECcCHHHHHHHHHHHHc------CCCEEEEECC
Confidence 3444334467888 9999999999999999999998 76 5555443
No 373
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.18 E-value=0.44 Score=46.85 Aligned_cols=91 Identities=20% Similarity=0.169 Sum_probs=59.7
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCcccc-CCCc--CCHHhhhc-----cC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~~~--~~~~Ea~~-----~A 179 (434)
.| .+|.|+|.|.+|...++-++.. |. +|++..+ +++..+.+++.|.... +... .+..+.++ ..
T Consensus 190 ~g-~~VlV~GaG~vG~~avqla~~~------Ga~~Vi~~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 190 PG-SVCAVFGLGGVGLAVIMGCKVA------GASRIIGVDI-NKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECS-CGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcC-CHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCC
Confidence 46 8999999999999999988888 88 6654443 3555778888886420 1000 12333333 47
Q ss_pred CEEEEeecchHHHHHHHHHHhcCCCC-cEEEE
Q 013877 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGL 210 (434)
Q Consensus 180 DiViLavpd~a~~~vl~eI~~~Lk~g-~iL~~ 210 (434)
|+||-++... +.++.....++++ -.++.
T Consensus 262 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 262 DYSFECIGNV---KVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEE
T ss_pred CEEEECCCcH---HHHHHHHHhhccCCcEEEE
Confidence 9999998753 2344555677776 55543
No 374
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=93.17 E-value=0.11 Score=51.57 Aligned_cols=69 Identities=17% Similarity=0.174 Sum_probs=47.5
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC----chhHHHHHHcCccccCCCcCCHHhhhccCCE
Q 013877 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEARAAGFTEENGTLGDIYETISGSDL 181 (434)
Q Consensus 107 ~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~----~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADi 181 (434)
.|+| .||++||= +++..|++..+..- |.+|.+...++ .... +++.|.... ...+++|+++++|+
T Consensus 151 ~l~g-lkva~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~--~~~~g~~v~--~~~d~~eav~~aDv 219 (309)
T 4f2g_A 151 PIRG-KTVAWVGDANNMLYTWIQAARIL------DFKLQLSTPPGYALDAKLV--DAESAPFYQ--VFDDPNEACKGADL 219 (309)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCGGGCCCGGGS--CGGGGGGEE--ECSSHHHHTTTCSE
T ss_pred CCCC-CEEEEECCCcchHHHHHHHHHHc------CCEEEEECCcccCCCHHHH--HHHcCCeEE--EEcCHHHHhcCCCE
Confidence 5788 99999995 58899999888887 88877654321 1111 223333210 15689999999999
Q ss_pred EEEee
Q 013877 182 VLLLI 186 (434)
Q Consensus 182 ViLav 186 (434)
|+..+
T Consensus 220 vyt~~ 224 (309)
T 4f2g_A 220 VTTDV 224 (309)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 99854
No 375
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=93.10 E-value=0.42 Score=47.89 Aligned_cols=81 Identities=12% Similarity=0.090 Sum_probs=42.6
Q ss_pred cccccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCC--cEEEEEecCCchh--HHHHH--Hc-CccccC--CCcCCHH
Q 013877 104 LPDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRS--FAEAR--AA-GFTEEN--GTLGDIY 173 (434)
Q Consensus 104 ~~~~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G--~~Vivg~r~~~~s--~~~A~--~~-G~~~~~--~~~~~~~ 173 (434)
++..... -||+|||. |.+|.+++..|... +=.+.+ .++.+.+...... .-.+. .+ .+.... ....+..
T Consensus 18 ~~~s~~~-vKVaViGAaG~IG~~la~~la~~-~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~ 95 (345)
T 4h7p_A 18 GPGSMSA-VKVAVTGAAGQIGYALVPLIARG-ALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPR 95 (345)
T ss_dssp ----CCC-EEEEEESTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHH
T ss_pred CCCCCCC-CEEEEECcCcHHHHHHHHHHHhc-cccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChH
Confidence 3444455 69999996 99999999988875 000111 1444443322111 11111 11 111000 0134678
Q ss_pred hhhccCCEEEEee
Q 013877 174 ETISGSDLVLLLI 186 (434)
Q Consensus 174 Ea~~~ADiViLav 186 (434)
+++++||+||++-
T Consensus 96 ~a~~~advVvi~a 108 (345)
T 4h7p_A 96 VAFDGVAIAIMCG 108 (345)
T ss_dssp HHTTTCSEEEECC
T ss_pred HHhCCCCEEEECC
Confidence 8999999999974
No 376
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.10 E-value=0.36 Score=47.80 Aligned_cols=92 Identities=20% Similarity=0.267 Sum_probs=60.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCcccc-CCC--cCCHHhhhc-----cC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGT--LGDIYETIS-----GS 179 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~~--~~~~~Ea~~-----~A 179 (434)
.| .+|.|+|.|.+|...++-++.. |. +|++. +.++...+.+++.|.... +.. ..+..+.++ ..
T Consensus 193 ~g-~~VlV~GaG~vG~~a~q~a~~~------Ga~~Vi~~-~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 193 PG-SNVAIFGLGTVGLAVAEGAKTA------GASRIIGI-DIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHH------TCSCEEEE-CSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEE-cCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCC
Confidence 46 8999999999999999999888 88 66554 433455788888887420 100 123333333 48
Q ss_pred CEEEEeecchHHHHHHHHHHhcCCCC-cEEEEe
Q 013877 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (434)
Q Consensus 180 DiViLavpd~a~~~vl~eI~~~Lk~g-~iL~~s 211 (434)
|+||-++... +.++.....+++| -.++..
T Consensus 265 D~vid~~g~~---~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 265 DYSFECIGNV---SVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCH---HHHHHHHHHhhccCCEEEEE
Confidence 9999998863 2344555677874 555433
No 377
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.07 E-value=0.19 Score=49.52 Aligned_cols=92 Identities=12% Similarity=0.075 Sum_probs=59.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhhc-----cCCE
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~~-----~ADi 181 (434)
.| ++|.|+|.|.+|...++-++.. |. +|++..+ +++..+.+++.|.... +....+..+.+. ..|+
T Consensus 190 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~~Vi~~~~-~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 190 PA-SSFVTWGAGAVGLSALLAAKVC------GASIIIAVDI-VESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp TT-CEEEEESCSHHHHHHHHHHHHH------TCSEEEEEES-CHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEECC-CHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcE
Confidence 45 8999999999999999988887 87 5554444 4555778888886310 111123333332 4799
Q ss_pred EEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 182 VLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
||-++... +.++.....|+++-.++..
T Consensus 262 vid~~g~~---~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 262 ALESTGSP---EILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEECSCCH---HHHHHHHHTEEEEEEEEEC
T ss_pred EEECCCCH---HHHHHHHHHHhcCCEEEEe
Confidence 99998753 2344555667776655543
No 378
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=93.06 E-value=0.24 Score=49.33 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=47.6
Q ss_pred ccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCC----chhHHHH----HHcC--ccccCCCcCCHHhh
Q 013877 107 AFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEA----RAAG--FTEENGTLGDIYET 175 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~-mG~A~A~nLrds~~~~~~G~~Vivg~r~~----~~s~~~A----~~~G--~~~~~~~~~~~~Ea 175 (434)
.|+| .||++||=|+ +..|++..+..- |.+|.+....+ ....+.+ ++.| +.. ..+++|+
T Consensus 152 ~l~g-l~va~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~----~~d~~ea 220 (321)
T 1oth_A 152 SLKG-LTLSWIGDGNNILHSIMMSAAKF------GMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLL----TNDPLEA 220 (321)
T ss_dssp CCTT-CEEEEESCSSHHHHHHHTTTGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEE----ESCHHHH
T ss_pred CcCC-cEEEEECCchhhHHHHHHHHHHc------CCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EECHHHH
Confidence 5788 9999999864 777777666665 88887765432 1222322 2445 332 5689999
Q ss_pred hccCCEEEEee
Q 013877 176 ISGSDLVLLLI 186 (434)
Q Consensus 176 ~~~ADiViLav 186 (434)
++++|+|+..+
T Consensus 221 v~~aDvvy~d~ 231 (321)
T 1oth_A 221 AHGGNVLITDT 231 (321)
T ss_dssp HTTCSEEEECC
T ss_pred hccCCEEEEec
Confidence 99999999955
No 379
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=92.98 E-value=0.23 Score=49.55 Aligned_cols=71 Identities=14% Similarity=0.196 Sum_probs=49.6
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecC----CchhHHH----HHHcCccccCCCcCCHHhhhc
Q 013877 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAE----ARAAGFTEENGTLGDIYETIS 177 (434)
Q Consensus 107 ~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~----~~~s~~~----A~~~G~~~~~~~~~~~~Ea~~ 177 (434)
.|+| .||++||= +++..+++..+..- |.+|.+.... +....+. +.+.|.... ...+++|+++
T Consensus 154 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~--~~~d~~eav~ 224 (323)
T 3gd5_A 154 RLAG-LKLAYVGDGNNVAHSLLLGCAKV------GMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQ--ILRDPFEAAR 224 (323)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEE--EESCHHHHHT
T ss_pred CCCC-CEEEEECCCCcHHHHHHHHHHHc------CCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEE--EECCHHHHhc
Confidence 4788 99999995 58899999988777 9888776433 2222232 334453210 1568999999
Q ss_pred cCCEEEEee
Q 013877 178 GSDLVLLLI 186 (434)
Q Consensus 178 ~ADiViLav 186 (434)
+||+|+..+
T Consensus 225 ~aDvvyt~~ 233 (323)
T 3gd5_A 225 GAHILYTDV 233 (323)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEec
Confidence 999998775
No 380
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.95 E-value=0.098 Score=47.08 Aligned_cols=71 Identities=18% Similarity=0.258 Sum_probs=47.6
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC---HHhhhccCCEEEEee
Q 013877 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLI 186 (434)
Q Consensus 111 ~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~---~~Ea~~~ADiViLav 186 (434)
|++|.|+| .|.+|.++++.|.+. |++|++..|..++..... .++......+.+ ..+++++.|+||.+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 75 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR------GFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCKGADAVISAF 75 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT------TCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC------CCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhcCCCEEEEeC
Confidence 48999999 599999999999999 999887777643321110 222111111223 456788999999997
Q ss_pred cch
Q 013877 187 SDA 189 (434)
Q Consensus 187 pd~ 189 (434)
.+.
T Consensus 76 ~~~ 78 (227)
T 3dhn_A 76 NPG 78 (227)
T ss_dssp CC-
T ss_pred cCC
Confidence 654
No 381
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.89 E-value=0.28 Score=47.68 Aligned_cols=92 Identities=17% Similarity=0.192 Sum_probs=61.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhhc----cCCEEE
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS----GSDLVL 183 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~~----~ADiVi 183 (434)
.| ++|.|+|.|.+|...++-++.. |.+|++..+. ++..+.+++.|.... +....+..+.+. ..|+||
T Consensus 166 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vi 237 (340)
T 3s2e_A 166 PG-QWVVISGIGGLGHVAVQYARAM------GLRVAAVDID-DAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVL 237 (340)
T ss_dssp TT-SEEEEECCSTTHHHHHHHHHHT------TCEEEEEESC-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCeEEEEeCC-HHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEE
Confidence 56 8999999999999999999888 9887655544 455778888886320 111123334333 579999
Q ss_pred EeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 184 LLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
.++... +.++.....|+++..++..
T Consensus 238 d~~g~~---~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 238 VTAVSP---KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp ESSCCH---HHHHHHHHHEEEEEEEEEC
T ss_pred EeCCCH---HHHHHHHHHhccCCEEEEe
Confidence 987643 2344455566776665543
No 382
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=92.81 E-value=0.17 Score=51.04 Aligned_cols=90 Identities=12% Similarity=0.095 Sum_probs=55.6
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecC--CchhHHHHH---HcCccccCCCcCCHHhhhccCCEEEE
Q 013877 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEAR---AAGFTEENGTLGDIYETISGSDLVLL 184 (434)
Q Consensus 111 ~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~--~~~s~~~A~---~~G~~~~~~~~~~~~Ea~~~ADiViL 184 (434)
|.|||||| .|..|.-+.+-|.+. + ..++...... ..+.....- ......+ ..+.++...++|+||+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-P----~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~---~~~~~~~~~~~Dvvf~ 84 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-P----EAKITYLSSRTYAGKKLEEIFPSTLENSILS---EFDPEKVSKNCDVLFT 84 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-T----TEEEEEEECSTTTTSBHHHHCGGGCCCCBCB---CCCHHHHHHHCSEEEE
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-C----CcEEEEEeCcccccCChHHhChhhccCceEE---eCCHHHhhcCCCEEEE
Confidence 47999998 699999999988876 1 2344332221 122222110 0112210 1245555578999999
Q ss_pred eecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
|+|.....++.++ + .|..|++.++
T Consensus 85 alp~~~s~~~~~~----~-~g~~VIDlSs 108 (351)
T 1vkn_A 85 ALPAGASYDLVRE----L-KGVKIIDLGA 108 (351)
T ss_dssp CCSTTHHHHHHTT----C-CSCEEEESSS
T ss_pred CCCcHHHHHHHHH----h-CCCEEEECCh
Confidence 9998887766544 4 6888888776
No 383
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=92.80 E-value=0.36 Score=45.42 Aligned_cols=71 Identities=23% Similarity=0.303 Sum_probs=48.6
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCC-cEEEEEecCCchhH-HHHHHcCccccCCCcCC---HHhhhccCCEEEEe
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSF-AEARAAGFTEENGTLGD---IYETISGSDLVLLL 185 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G-~~Vivg~r~~~~s~-~~A~~~G~~~~~~~~~~---~~Ea~~~ADiViLa 185 (434)
|+|.|+|. |.+|.++++.|.+. | ++|++..|...+.. +.....|+....+.+.+ +.++++++|+||.+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~------g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLED------GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhc------CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 78999997 99999999999998 8 89887777644321 22223454321111333 45678899999998
Q ss_pred ecc
Q 013877 186 ISD 188 (434)
Q Consensus 186 vpd 188 (434)
...
T Consensus 80 a~~ 82 (299)
T 2wm3_A 80 TNY 82 (299)
T ss_dssp CCH
T ss_pred CCC
Confidence 763
No 384
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.74 E-value=0.54 Score=45.94 Aligned_cols=92 Identities=16% Similarity=0.108 Sum_probs=59.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCc-CC-HH---hhh-----c
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GD-IY---ETI-----S 177 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~-~~-~~---Ea~-----~ 177 (434)
.| ++|.|+|.|.+|...++-++.. |.+|++..+ +++..+.+++.|.... +... .+ .+ +.. .
T Consensus 168 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 168 LG-TTVLVIGAGPIGLVSVLAAKAY------GAFVVCTAR-SPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEES-CHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEcC-CHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCC
Confidence 56 8999999999999999988887 888654444 3555678888886310 1110 12 11 222 2
Q ss_pred cCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 178 ~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
..|+||-++.... .++.....|+++..++..
T Consensus 240 g~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 240 LPNVTIDCSGNEK---CITIGINITRTGGTLMLV 270 (352)
T ss_dssp CCSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCCEEEECCCCHH---HHHHHHHHHhcCCEEEEE
Confidence 5899999997642 334445567777665543
No 385
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=92.72 E-value=0.25 Score=49.67 Aligned_cols=71 Identities=13% Similarity=0.153 Sum_probs=49.9
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecC----CchhHHH----HHHcCccccCCCcCCHHhhhc
Q 013877 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAE----ARAAGFTEENGTLGDIYETIS 177 (434)
Q Consensus 107 ~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~----~~~s~~~----A~~~G~~~~~~~~~~~~Ea~~ 177 (434)
.|+| .||++||= +++..+++..+..- |.+|.+...+ ++...+. |++.|.... ...+++|+++
T Consensus 176 ~l~g-lkva~vGD~~nva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~--~~~d~~eav~ 246 (340)
T 4ep1_A 176 TFKG-IKLAYVGDGNNVCHSLLLASAKV------GMHMTVATPVGYRPNEEIVKKALAIAKETGAEIE--ILHNPELAVN 246 (340)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEE--EESCHHHHHT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEE--EECCHHHHhC
Confidence 4788 99999996 47889999888877 9888776433 2222222 335663210 1568999999
Q ss_pred cCCEEEEee
Q 013877 178 GSDLVLLLI 186 (434)
Q Consensus 178 ~ADiViLav 186 (434)
+||+|+..+
T Consensus 247 ~aDVvyt~~ 255 (340)
T 4ep1_A 247 EADFIYTDV 255 (340)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEecC
Confidence 999999865
No 386
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.70 E-value=0.27 Score=43.66 Aligned_cols=92 Identities=13% Similarity=0.087 Sum_probs=58.8
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhh------ccCC
Q 013877 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (434)
Q Consensus 109 ~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~------~~AD 180 (434)
.| ++|.|+| .|.+|.+.++.++.. |.+|++..+. ....+.+++.|.... +-...+..+.+ ...|
T Consensus 38 ~g-~~vlV~Ga~ggiG~~~~~~~~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 38 PG-ERVLIHSATGGVGMAAVSIAKMI------GARIYTTAGS-DAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TT-CEEEETTTTSHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEeeCCChHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCe
Confidence 46 8999999 699999999999988 8888766554 334556666664210 11111222222 1479
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
+||.++.. +.++...+.|+++..++...
T Consensus 110 ~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 110 VVLNSLAG----EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEECCCT----HHHHHHHHTEEEEEEEEECS
T ss_pred EEEECCch----HHHHHHHHHhccCCEEEEEc
Confidence 99988864 34555566777776665443
No 387
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.66 E-value=0.25 Score=46.49 Aligned_cols=73 Identities=14% Similarity=0.147 Sum_probs=48.7
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCch----hHHH---HHHcCccccCCCcCC---HHhhhccC
Q 013877 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR----SFAE---ARAAGFTEENGTLGD---IYETISGS 179 (434)
Q Consensus 111 ~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~----s~~~---A~~~G~~~~~~~~~~---~~Ea~~~A 179 (434)
+++|.|+| .|.+|.++++.|.+. |++|++..|..+. ..+. ....|+....+.+.+ +.++++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 77 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL------GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQV 77 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC------CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCC
Confidence 37899999 499999999999998 9988777775321 1111 112354321111333 45678899
Q ss_pred CEEEEeecch
Q 013877 180 DLVLLLISDA 189 (434)
Q Consensus 180 DiViLavpd~ 189 (434)
|+||.+....
T Consensus 78 d~vi~~a~~~ 87 (313)
T 1qyd_A 78 DVVISALAGG 87 (313)
T ss_dssp SEEEECCCCS
T ss_pred CEEEECCccc
Confidence 9999988643
No 388
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.63 E-value=0.13 Score=51.49 Aligned_cols=94 Identities=18% Similarity=0.230 Sum_probs=60.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCccccCCCcCCH-Hhhhc------cCC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDI-YETIS------GSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~-~Ea~~------~AD 180 (434)
.| .+|.|+|.|.+|...++-++.. |. +|++..+. .+..+.+++.|...-+-...+. .+.+. ..|
T Consensus 185 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 185 PG-SHVYIAGAGPVGRCAAAGARLL------GAACVIVGDQN-PERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEEESC-HHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEcCC-HHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCC
Confidence 46 8999999999999999988887 88 77655544 4556788888863211111222 33222 579
Q ss_pred EEEEeecchH-----------HHHHHHHHHhcCCCCcEEEE
Q 013877 181 LVLLLISDAA-----------QADNYEKIFSCMKPNSILGL 210 (434)
Q Consensus 181 iViLavpd~a-----------~~~vl~eI~~~Lk~g~iL~~ 210 (434)
+||-++.... ....+++....++++-.++.
T Consensus 257 vvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 257 CGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp EEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEEC
T ss_pred EEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEE
Confidence 9999998542 01245555566777666553
No 389
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=92.61 E-value=0.36 Score=46.33 Aligned_cols=74 Identities=19% Similarity=0.126 Sum_probs=49.5
Q ss_pred ccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHH---H-------cCccccCCCcCC---H
Q 013877 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR---A-------AGFTEENGTLGD---I 172 (434)
Q Consensus 107 ~~~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~---~-------~G~~~~~~~~~~---~ 172 (434)
.+++ ++|.|.| .|-+|.++++.|.+. |++|++..|.......... . .++....+.+.+ .
T Consensus 22 ~~~~-~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 94 (351)
T 3ruf_A 22 IFSP-KTWLITGVAGFIGSNLLEKLLKL------NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTC 94 (351)
T ss_dssp HHSC-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHH
T ss_pred CCCC-CeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHH
Confidence 4566 9999999 599999999999999 9998877775433222221 1 233211111233 4
Q ss_pred HhhhccCCEEEEeec
Q 013877 173 YETISGSDLVLLLIS 187 (434)
Q Consensus 173 ~Ea~~~ADiViLavp 187 (434)
.+++++.|+||.+..
T Consensus 95 ~~~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 95 EQVMKGVDHVLHQAA 109 (351)
T ss_dssp HHHTTTCSEEEECCC
T ss_pred HHHhcCCCEEEECCc
Confidence 567789999998875
No 390
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=92.59 E-value=0.17 Score=50.23 Aligned_cols=72 Identities=17% Similarity=0.148 Sum_probs=53.3
Q ss_pred ccCCCCEEEEEccc---chHHHHHHHHHhhhhhhcCCcEEEEEecC----CchhHHHHHHcCccccCCCcCCHHhhhccC
Q 013877 107 AFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAAGFTEENGTLGDIYETISGS 179 (434)
Q Consensus 107 ~~~g~kkIgIIG~G---~mG~A~A~nLrds~~~~~~G~~Vivg~r~----~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~A 179 (434)
.|+| .||++||=| ++..|++..+..- |.+|.+...+ +....+.+++.|.... ...+++|++++|
T Consensus 152 ~l~g-l~va~vGD~~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~a 222 (308)
T 1ml4_A 152 RIDG-LKIGLLGDLKYGRTVHSLAEALTFY------DVELYLISPELLRMPRHIVEELREKGMKVV--ETTTLEDVIGKL 222 (308)
T ss_dssp CSSS-EEEEEESCTTTCHHHHHHHHHGGGS------CEEEEEECCGGGCCCHHHHHHHHHTTCCEE--EESCTHHHHTTC
T ss_pred CCCC-eEEEEeCCCCcCchHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHcCCeEE--EEcCHHHHhcCC
Confidence 5788 999999984 8999999998877 9888776543 2234456666675320 146899999999
Q ss_pred CEEEEeec
Q 013877 180 DLVLLLIS 187 (434)
Q Consensus 180 DiViLavp 187 (434)
|+|+...=
T Consensus 223 Dvvyt~~~ 230 (308)
T 1ml4_A 223 DVLYVTRI 230 (308)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99998663
No 391
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.56 E-value=0.21 Score=49.70 Aligned_cols=95 Identities=25% Similarity=0.307 Sum_probs=60.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCccccCCCcCC-HHhhhc------cCC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETIS------GSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~-~~Ea~~------~AD 180 (434)
.| .+|.|+|.|.+|...++-++.. |. .|++. +.++...+.+++.|...-+....+ ..+.++ ..|
T Consensus 185 ~g-~~VlV~GaG~vG~~aiqlAk~~------Ga~~Vi~~-~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 185 PG-STVYVAGAGPVGLAAAASARLL------GAAVVIVG-DLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEE-ESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCCeEEEE-cCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCC
Confidence 56 8999999999999999988887 87 55544 444556788888887421111111 233222 479
Q ss_pred EEEEeecchH------------HHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAA------------QADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a------------~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+||-++.... ....+++....++++-.++..
T Consensus 257 vvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 257 CAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp EEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 9999987542 012455555667776655543
No 392
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.54 E-value=0.49 Score=48.81 Aligned_cols=87 Identities=13% Similarity=0.077 Sum_probs=56.4
Q ss_pred ccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-cCccccCCCcCCHHhhhccC
Q 013877 101 FNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGDIYETISGS 179 (434)
Q Consensus 101 f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-~G~~~~~~~~~~~~Ea~~~A 179 (434)
|+.. -.++| ++|.|||.|..|.+-++.|.+. |.+|+|.........+...+ .++....+. .+ .+-+.++
T Consensus 4 ~P~~-~~l~~-~~vlVvGgG~va~~k~~~L~~~------ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~-~~-~~~l~~~ 73 (457)
T 1pjq_A 4 LPIF-CQLRD-RDCLIVGGGDVAERKARLLLEA------GARLTVNALTFIPQFTVWANEGMLTLVEGP-FD-ETLLDSC 73 (457)
T ss_dssp EEEE-ECCBT-CEEEEECCSHHHHHHHHHHHHT------TBEEEEEESSCCHHHHHHHTTTSCEEEESS-CC-GGGGTTC
T ss_pred eeeE-EECCC-CEEEEECCCHHHHHHHHHHHhC------cCEEEEEcCCCCHHHHHHHhcCCEEEEECC-CC-ccccCCc
Confidence 3444 45788 9999999999999999999999 99888776543332222222 233221111 12 2346789
Q ss_pred CEEEEeecchHH-HHHHHH
Q 013877 180 DLVLLLISDAAQ-ADNYEK 197 (434)
Q Consensus 180 DiViLavpd~a~-~~vl~e 197 (434)
|+||.++.+... ..++..
T Consensus 74 ~lVi~at~~~~~n~~i~~~ 92 (457)
T 1pjq_A 74 WLAIAATDDDTVNQRVSDA 92 (457)
T ss_dssp SEEEECCSCHHHHHHHHHH
T ss_pred cEEEEcCCCHHHHHHHHHH
Confidence 999999887754 345443
No 393
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.53 E-value=0.49 Score=46.42 Aligned_cols=92 Identities=14% Similarity=0.107 Sum_probs=59.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCcccc-CCC---cCCHHhhh-----cc
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGT---LGDIYETI-----SG 178 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~~---~~~~~Ea~-----~~ 178 (434)
.| .+|.|+|.|.+|...++-++.. |. +|++..+. +...+.+++.|.... +.. ..+..+.+ ..
T Consensus 171 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g 242 (356)
T 1pl8_A 171 LG-HKVLVCGAGPIGMVTLLVAKAM------GAAQVVVTDLS-ATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCK 242 (356)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESC-HHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCC-HHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCC
Confidence 46 8999999999999999988887 88 76655443 455678888886320 100 00111122 35
Q ss_pred CCEEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 179 ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
.|+||-++.... .++.....|+++..++..
T Consensus 243 ~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 243 PEVTIECTGAEA---SIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp CSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCCChH---HHHHHHHHhcCCCEEEEE
Confidence 899999997542 334445567777665543
No 394
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.46 E-value=0.17 Score=49.98 Aligned_cols=91 Identities=20% Similarity=0.218 Sum_probs=59.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhhc------cCCE
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSDL 181 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~~------~ADi 181 (434)
.| ++|.|+|.|.+|.+.++-++.. |.+|++..+. .+..+.+++.|.... +....+..+.+. ..|+
T Consensus 189 ~g-~~VlV~G~G~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~ 260 (363)
T 3uog_A 189 AG-DRVVVQGTGGVALFGLQIAKAT------GAEVIVTSSS-REKLDRAFALGADHGINRLEEDWVERVYALTGDRGADH 260 (363)
T ss_dssp TT-CEEEEESSBHHHHHHHHHHHHT------TCEEEEEESC-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEecC-chhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceE
Confidence 45 8999999999999999999888 9887765554 445677888886420 111123333322 5899
Q ss_pred EEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 182 VLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
||-++....... ....++++..++..
T Consensus 261 vid~~g~~~~~~----~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 261 ILEIAGGAGLGQ----SLKAVAPDGRISVI 286 (363)
T ss_dssp EEEETTSSCHHH----HHHHEEEEEEEEEE
T ss_pred EEECCChHHHHH----HHHHhhcCCEEEEE
Confidence 999998554433 34456666555544
No 395
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=92.42 E-value=0.57 Score=41.59 Aligned_cols=90 Identities=14% Similarity=0.053 Sum_probs=58.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCC--cEEEEEecCCchhHHHHHH----cCc---cccCCCcCCHHh---hh
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARA----AGF---TEENGTLGDIYE---TI 176 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G--~~Vivg~r~~~~s~~~A~~----~G~---~~~~~~~~~~~E---a~ 176 (434)
.+ .+|.-||+|. | .++..|.+. + .+| ++.+.++...+.|++ .|+ ... ..+..+ ..
T Consensus 40 ~~-~~vLDiG~G~-G-~~~~~la~~------~~~~~v-~~vD~s~~~~~~a~~~~~~~~~~~v~~~---~~d~~~~~~~~ 106 (204)
T 3e05_A 40 DD-LVMWDIGAGS-A-SVSIEASNL------MPNGRI-FALERNPQYLGFIRDNLKKFVARNVTLV---EAFAPEGLDDL 106 (204)
T ss_dssp TT-CEEEEETCTT-C-HHHHHHHHH------CTTSEE-EEEECCHHHHHHHHHHHHHHTCTTEEEE---ECCTTTTCTTS
T ss_pred CC-CEEEEECCCC-C-HHHHHHHHH------CCCCEE-EEEeCCHHHHHHHHHHHHHhCCCcEEEE---eCChhhhhhcC
Confidence 45 8999999997 3 344455554 3 455 566665655555554 232 110 122222 22
Q ss_pred ccCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 177 ~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
...|+|++..+......+++++...|+||..+++.
T Consensus 107 ~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 107 PDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp CCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEE
Confidence 56899999887767778999999999999877644
No 396
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=92.36 E-value=0.16 Score=49.31 Aligned_cols=80 Identities=14% Similarity=0.150 Sum_probs=46.6
Q ss_pred ccccccccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcC-C---HHhh
Q 013877 101 FNLLPDAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG-D---IYET 175 (434)
Q Consensus 101 f~~~~~~~~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~-~---~~Ea 175 (434)
++.+...+++ ++|.|+| .|.+|..+++.|.+. .|++|++..|..++........++....+.+. + +.++
T Consensus 15 ~~~~~~~m~~-~~vlVtGatG~iG~~l~~~L~~~-----~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~ 88 (372)
T 3slg_A 15 QTQGPGSMKA-KKVLILGVNGFIGHHLSKRILET-----TDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYH 88 (372)
T ss_dssp --------CC-CEEEEESCSSHHHHHHHHHHHHH-----SSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHH
T ss_pred hhcCCcccCC-CEEEEECCCChHHHHHHHHHHhC-----CCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHH
Confidence 5566666777 9999999 699999999999875 16788877776443222221123321111122 2 4457
Q ss_pred hccCCEEEEee
Q 013877 176 ISGSDLVLLLI 186 (434)
Q Consensus 176 ~~~ADiViLav 186 (434)
++++|+||.+.
T Consensus 89 ~~~~d~Vih~A 99 (372)
T 3slg_A 89 VKKCDVILPLV 99 (372)
T ss_dssp HHHCSEEEECB
T ss_pred hccCCEEEEcC
Confidence 78999999754
No 397
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.33 E-value=0.37 Score=49.71 Aligned_cols=94 Identities=12% Similarity=0.183 Sum_probs=63.7
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcC--ccccCCCcCCHHh
Q 013877 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--FTEENGTLGDIYE 174 (434)
Q Consensus 107 ~~~g~kkIgIIG~G----------~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G--~~~~~~~~~~~~E 174 (434)
.++| +||+|.|+- +-...++..|.+. |.+|.+++..-.. +.....| +.. +.+.+|
T Consensus 315 ~~~~-~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~------g~~v~~~DP~~~~--~~~~~~~~~~~~----~~~~~~ 381 (450)
T 3gg2_A 315 NVQG-RCVAIWGLSFKPGTDDMREAPSLVLIEKLLEV------GCRVRVYDPVAMK--EAQKRLGDKVEY----TTDMYD 381 (450)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSCHH--HHHHHHGGGSEE----CSSHHH
T ss_pred cCCC-CEEEEEeeeeCCCCcccccChHHHHHHHHHHC------CCEEEEECCCCcH--HHHHhcCcccee----cCCHHH
Confidence 4688 999999984 4467888888888 9998766543211 1112233 332 457889
Q ss_pred hhccCCEEEEeecchHHHH-HHHHHHhcCCCCcEEEEeccc
Q 013877 175 TISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 175 a~~~ADiViLavpd~a~~~-vl~eI~~~Lk~g~iL~~s~G~ 214 (434)
+++++|.|+++|.-....+ -++.+...|+ +.+|++.-++
T Consensus 382 ~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~-~~~i~D~r~~ 421 (450)
T 3gg2_A 382 AVRGAEALFHVTEWKEFRMPDWSALSQAMA-ASLVIDGRNV 421 (450)
T ss_dssp HTTTCSCEEECSCCGGGSSCCHHHHHHHSS-SCEEEESSCC
T ss_pred HhcCCCEEEEccCCHHHhhcCHHHHHHhcC-CCEEEECCCC
Confidence 9999999999998776643 2455666665 4577776553
No 398
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.29 E-value=0.68 Score=47.81 Aligned_cols=96 Identities=19% Similarity=0.151 Sum_probs=64.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcC-ccccCCCcCC----HHhhhccCCEEEEee
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLGD----IYETISGSDLVLLLI 186 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G-~~~~~~~~~~----~~Ea~~~ADiViLav 186 (434)
++|.|+|.|++|..+|+.|.+ +++|.+-.+...+....|.+.- ..+.+|...+ .++-+.++|+++.+|
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~-------~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T 308 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQ-------TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALT 308 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECC
T ss_pred cEEEEEcchHHHHHHHHHhhh-------cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcc
Confidence 799999999999999999854 5677777665555556666542 2211222233 235688999999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEEEEeccc
Q 013877 187 SDAAQADNYEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL~~s~G~ 214 (434)
.++..-=+..-++..+...+++....-.
T Consensus 309 ~~De~Ni~~~llAk~~gv~kvIa~vn~~ 336 (461)
T 4g65_A 309 NEDETNIMSAMLAKRMGAKKVMVLIQRG 336 (461)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECSCH
T ss_pred cCcHHHHHHHHHHHHcCCcccccccccc
Confidence 9876544444566667666777766543
No 399
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.27 E-value=0.28 Score=47.94 Aligned_cols=90 Identities=18% Similarity=0.138 Sum_probs=60.8
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhh------ccCCE
Q 013877 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI------SGSDL 181 (434)
Q Consensus 109 ~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~------~~ADi 181 (434)
.| ++|.|+| .|.+|.+.++-++.. |.+|++. +. ....+.+++.|...-+ ...+..+.+ ...|+
T Consensus 150 ~g-~~VlV~Ga~g~iG~~~~q~a~~~------Ga~Vi~~-~~-~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 150 DG-QTVLIQGGGGGVGHVAIQIALAR------GARVFAT-AR-GSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEE-EC-HHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CC-CEEEEecCCCHHHHHHHHHHHHC------CCEEEEE-eC-HHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceE
Confidence 46 8999999 799999999999988 9887665 44 4456778888865312 122333333 25899
Q ss_pred EEEeecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
||-++... .+......|+++-.++...
T Consensus 220 vid~~g~~----~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 220 VYDTLGGP----VLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEESSCTH----HHHHHHHHEEEEEEEEESC
T ss_pred EEECCCcH----HHHHHHHHHhcCCeEEEEc
Confidence 99998864 3444445566666555443
No 400
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=92.10 E-value=0.35 Score=50.70 Aligned_cols=75 Identities=21% Similarity=0.085 Sum_probs=49.3
Q ss_pred ccccCCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCc-hhHHHHHHcCccccCCCcCCHHhhhccCCEE
Q 013877 105 PDAFNGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLV 182 (434)
Q Consensus 105 ~~~~~g~kkIgIIG~G~mG~A-~A~nLrds~~~~~~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiV 182 (434)
.-+|++ ++|-|||.|-.|.+ +|+-|++. |++|.+.+.... ...+..++.|+....| .+.++...++|+|
T Consensus 14 ~~~~~~-~~i~~iGiGg~Gms~lA~~l~~~------G~~V~~sD~~~~~~~~~~L~~~gi~~~~G--~~~~~~~~~~d~v 84 (524)
T 3hn7_A 14 NLYFQG-MHIHILGICGTFMGSLALLARAL------GHTVTGSDANIYPPMSTQLEQAGVTIEEG--YLIAHLQPAPDLV 84 (524)
T ss_dssp -----C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCCCTTHHHHHHHTTCEEEES--CCGGGGCSCCSEE
T ss_pred ceeecC-CEEEEEEecHhhHHHHHHHHHhC------CCEEEEECCCCCcHHHHHHHHCCCEEECC--CCHHHcCCCCCEE
Confidence 357788 99999999999996 78888888 999987776532 3344556678764211 2334444679999
Q ss_pred EEe--ecc
Q 013877 183 LLL--ISD 188 (434)
Q Consensus 183 iLa--vpd 188 (434)
|+. +|+
T Consensus 85 V~Spgi~~ 92 (524)
T 3hn7_A 85 VVGNAMKR 92 (524)
T ss_dssp EECTTCCT
T ss_pred EECCCcCC
Confidence 984 554
No 401
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=92.07 E-value=0.32 Score=49.36 Aligned_cols=70 Identities=13% Similarity=0.016 Sum_probs=49.1
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC------chhHH----HHHHcCccccCCCcCCHHh
Q 013877 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG------SRSFA----EARAAGFTEENGTLGDIYE 174 (434)
Q Consensus 107 ~~~g~kkIgIIG~G--~mG~A~A~nLrds~~~~~~G~~Vivg~r~~------~~s~~----~A~~~G~~~~~~~~~~~~E 174 (434)
.|+| .||++||=+ +++.|++..+..- |.+|.+...+. +...+ .+.+.|.... .+.+++|
T Consensus 177 ~l~g-lkva~vGD~~nnva~Sl~~~~~~l------G~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~--~~~d~~e 247 (365)
T 4amu_A 177 NLKN-KKIVFIGDYKNNVGVSTMIGAAFN------GMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLR--FSTDKIL 247 (365)
T ss_dssp SCTT-CEEEEESSTTSHHHHHHHHHHHHT------TCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEE--EESCHHH
T ss_pred CCCC-CEEEEECCCCcchHHHHHHHHHHc------CCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEE--EECCHHH
Confidence 4788 999999988 7888998888877 98887664321 12222 2344563210 1568999
Q ss_pred hhccCCEEEEe
Q 013877 175 TISGSDLVLLL 185 (434)
Q Consensus 175 a~~~ADiViLa 185 (434)
++++||+|+.-
T Consensus 248 av~~aDVVytd 258 (365)
T 4amu_A 248 AAQDADVIYTD 258 (365)
T ss_dssp HTTTCSEEEEC
T ss_pred HhcCCCEEEec
Confidence 99999999984
No 402
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=92.05 E-value=0.15 Score=50.20 Aligned_cols=69 Identities=13% Similarity=-0.012 Sum_probs=51.0
Q ss_pred ccCCCCEEEEEcc---cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEE
Q 013877 107 AFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (434)
Q Consensus 107 ~~~g~kkIgIIG~---G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiVi 183 (434)
.|+| .||++||= +++..|++..+..- |.+|.+...++-.... ..+.|+.. ..+++|++++||+|+
T Consensus 143 ~l~g-l~va~vGDl~~~rva~Sl~~~~~~~------g~~v~~~~P~~~~p~~-~~~~g~~~----~~d~~eav~~aDvvy 210 (291)
T 3d6n_B 143 EVKD-LRVLYVGDIKHSRVFRSGAPLLNMF------GAKIGVCGPKTLIPRD-VEVFKVDV----FDDVDKGIDWADVVI 210 (291)
T ss_dssp CCTT-CEEEEESCCTTCHHHHHHHHHHHHT------TCEEEEESCGGGSCTT-GGGGCEEE----ESSHHHHHHHCSEEE
T ss_pred CcCC-cEEEEECCCCCCchHHHHHHHHHHC------CCEEEEECCchhCCch-HHHCCCEE----EcCHHHHhCCCCEEE
Confidence 5788 99999997 89999999999888 9988776443211001 12456554 578999999999999
Q ss_pred Eeecc
Q 013877 184 LLISD 188 (434)
Q Consensus 184 Lavpd 188 (434)
. +-.
T Consensus 211 ~-~~~ 214 (291)
T 3d6n_B 211 W-LRL 214 (291)
T ss_dssp E-CCC
T ss_pred E-eCc
Confidence 8 554
No 403
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=92.04 E-value=0.77 Score=43.77 Aligned_cols=93 Identities=16% Similarity=0.247 Sum_probs=57.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc----Ccccc-CCCcCCHHhhhccCCEEE
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GFTEE-NGTLGDIYETISGSDLVL 183 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~----G~~~~-~~~~~~~~Ea~~~ADiVi 183 (434)
.+ .+|.-||||. |. ++..|.+.. |.+| ++.+.++...+.|++. |.... .-...+..+.-...|+|+
T Consensus 90 ~~-~~vLDiGcG~-G~-~~~~la~~~-----~~~v-~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~ 160 (318)
T 2fk8_A 90 PG-MTLLDIGCGW-GT-TMRRAVERF-----DVNV-IGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIV 160 (318)
T ss_dssp TT-CEEEEESCTT-SH-HHHHHHHHH-----CCEE-EEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEE
T ss_pred Cc-CEEEEEcccc-hH-HHHHHHHHC-----CCEE-EEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEE
Confidence 46 8999999998 33 333343321 5565 5666656555555542 32100 000234444335689999
Q ss_pred Ee-----ecchHHHHHHHHHHhcCCCCcEEEE
Q 013877 184 LL-----ISDAAQADNYEKIFSCMKPNSILGL 210 (434)
Q Consensus 184 La-----vpd~a~~~vl~eI~~~Lk~g~iL~~ 210 (434)
.. +++.....+++++...|+||..+++
T Consensus 161 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 161 SIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred EeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 87 6666677899999999999987654
No 404
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=92.01 E-value=0.35 Score=48.35 Aligned_cols=70 Identities=14% Similarity=0.083 Sum_probs=49.1
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCCch------hHHHHH----H--cCccccCCCcCCH
Q 013877 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR------SFAEAR----A--AGFTEENGTLGDI 172 (434)
Q Consensus 107 ~~~g~kkIgIIG~G--~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~------s~~~A~----~--~G~~~~~~~~~~~ 172 (434)
.|+| .||++||=+ ++..|++..+..- |.+|.+...++-. ..+.++ + .|.... ...++
T Consensus 158 ~l~g-l~va~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~--~~~d~ 228 (328)
T 3grf_A 158 GFKG-IKFAYCGDSMNNVTYDLMRGCALL------GMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIK--IFHDC 228 (328)
T ss_dssp TGGG-CCEEEESCCSSHHHHHHHHHHHHH------TCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEE--EESSH
T ss_pred ccCC-cEEEEeCCCCcchHHHHHHHHHHc------CCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEE--EEcCH
Confidence 5888 999999976 8889999888887 9888776443211 223333 3 453210 15689
Q ss_pred HhhhccCCEEEEe
Q 013877 173 YETISGSDLVLLL 185 (434)
Q Consensus 173 ~Ea~~~ADiViLa 185 (434)
+|+++++|+|+.-
T Consensus 229 ~eav~~aDvvytd 241 (328)
T 3grf_A 229 KKGCEGVDVVYTD 241 (328)
T ss_dssp HHHHTTCSEEEEC
T ss_pred HHHhcCCCEEEec
Confidence 9999999999863
No 405
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=91.84 E-value=0.16 Score=53.29 Aligned_cols=48 Identities=27% Similarity=0.344 Sum_probs=34.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcC
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG 161 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G 161 (434)
.++| +++.|+|.|-+|.+++..|.+. |.+|++.+|..++..+.+.+.+
T Consensus 361 ~l~~-k~vlV~GaGGig~aia~~L~~~------G~~V~i~~R~~~~a~~la~~~~ 408 (523)
T 2o7s_A 361 PLAS-KTVVVIGAGGAGKALAYGAKEK------GAKVVIANRTYERALELAEAIG 408 (523)
T ss_dssp ------CEEEECCSHHHHHHHHHHHHH------CC-CEEEESSHHHHHHHHHHTT
T ss_pred ccCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHcC
Confidence 3567 8999999999999999999998 9888888887555555554443
No 406
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.84 E-value=0.33 Score=47.27 Aligned_cols=91 Identities=13% Similarity=0.167 Sum_probs=59.2
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhh----ccCCEEE
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI----SGSDLVL 183 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~----~~ADiVi 183 (434)
.| ++|.|+|.|.+|...++-++.. |.+|++..++ +...+.+++.|.... +-...+..+.+ ...|+||
T Consensus 164 ~g-~~VlV~GaG~vG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vi 235 (339)
T 1rjw_A 164 PG-EWVAIYGIGGLGHVAVQYAKAM------GLNVVAVDIG-DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAV 235 (339)
T ss_dssp TT-CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEE
Confidence 46 8999999999999999999988 9887655544 455677778786320 11112333333 4689999
Q ss_pred EeecchHHHHHHHHHHhcCCCCcEEEE
Q 013877 184 LLISDAAQADNYEKIFSCMKPNSILGL 210 (434)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~g~iL~~ 210 (434)
-++.... .++...+.|+++..++.
T Consensus 236 d~~g~~~---~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 236 VTAVSKP---AFQSAYNSIRRGGACVL 259 (339)
T ss_dssp ESSCCHH---HHHHHHHHEEEEEEEEE
T ss_pred ECCCCHH---HHHHHHHHhhcCCEEEE
Confidence 9988522 33444455666655543
No 407
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=91.79 E-value=0.36 Score=46.96 Aligned_cols=83 Identities=14% Similarity=0.187 Sum_probs=52.9
Q ss_pred ccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhcc
Q 013877 99 DLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG 178 (434)
Q Consensus 99 ~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ 178 (434)
+.|....+..+| +||++||+ | +.+.+.+ .. +.++.|.++... .|..+ ....++++++
T Consensus 130 d~~~~~~~~~~g-~kV~vIG~--~-P~i~~~l-~~------~~~v~V~d~~p~--------~g~~p----~~~~e~ll~~ 186 (270)
T 2h1q_A 130 DPFIMSQNEVKG-KKVGVVGH--F-PHLESLL-EP------ICDLSILEWSPE--------EGDYP----LPASEFILPE 186 (270)
T ss_dssp CHHHHTTTTTTT-SEEEEESC--C-TTHHHHH-TT------TSEEEEEESSCC--------TTCEE----GGGHHHHGGG
T ss_pred cHHHHHHhhcCC-CEEEEECC--C-HHHHHHH-hC------CCCEEEEECCCC--------CCCCC----hHHHHHHhhc
Confidence 456555567788 99999999 4 6666644 45 678888877643 24332 2346678999
Q ss_pred CCEEEEeecchHHHHHHHHHHhcCCCC
Q 013877 179 SDLVLLLISDAAQADNYEKIFSCMKPN 205 (434)
Q Consensus 179 ADiViLavpd~a~~~vl~eI~~~Lk~g 205 (434)
||+|++. --...-..++.|..+.++.
T Consensus 187 aD~viiT-GsTlvN~Ti~~lL~~~~~a 212 (270)
T 2h1q_A 187 CDYVYIT-CASVVDKTLPRLLELSRNA 212 (270)
T ss_dssp CSEEEEE-THHHHHTCHHHHHHHTTTS
T ss_pred CCEEEEE-eeeeecCCHHHHHHhCccC
Confidence 9998865 3333334555555555544
No 408
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=91.79 E-value=0.51 Score=45.47 Aligned_cols=74 Identities=19% Similarity=0.124 Sum_probs=48.9
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchh---HHHHH-------HcCccccCCCcCC---H
Q 013877 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS---FAEAR-------AAGFTEENGTLGD---I 172 (434)
Q Consensus 107 ~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s---~~~A~-------~~G~~~~~~~~~~---~ 172 (434)
.+++ ++|.|.|. |-+|.++++.|.+. |++|++..|..... .+... ..++......+.+ +
T Consensus 24 ~~~~-~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 96 (352)
T 1sb8_A 24 PAQP-KVWLITGVAGFIGSNLLETLLKL------DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDC 96 (352)
T ss_dssp HHSC-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHH
T ss_pred CccC-CeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHH
Confidence 3566 89999997 99999999999998 99988777754321 11111 1233211111233 4
Q ss_pred HhhhccCCEEEEeec
Q 013877 173 YETISGSDLVLLLIS 187 (434)
Q Consensus 173 ~Ea~~~ADiViLavp 187 (434)
.+++++.|+||.+..
T Consensus 97 ~~~~~~~d~vih~A~ 111 (352)
T 1sb8_A 97 NNACAGVDYVLHQAA 111 (352)
T ss_dssp HHHHTTCSEEEECCS
T ss_pred HHHhcCCCEEEECCc
Confidence 467789999999865
No 409
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.72 E-value=0.56 Score=47.47 Aligned_cols=87 Identities=13% Similarity=0.115 Sum_probs=60.1
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCH---------------
Q 013877 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI--------------- 172 (434)
Q Consensus 109 ~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~--------------- 172 (434)
.| ++|.|+|. |.+|.+.++-++.. |.+|++..+. ....+.+++.|... +.+.
T Consensus 220 ~g-~~VlV~GasG~iG~~a~qla~~~------Ga~vi~~~~~-~~~~~~~~~lGa~~----~i~~~~~~~~~~~~~~~~~ 287 (447)
T 4a0s_A 220 QG-DIVLIWGASGGLGSYAIQFVKNG------GGIPVAVVSS-AQKEAAVRALGCDL----VINRAELGITDDIADDPRR 287 (447)
T ss_dssp TT-CEEEETTTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCCC----EEEHHHHTCCTTGGGCHHH
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCCE----EEecccccccccccccccc
Confidence 45 89999998 99999999999988 9887766654 45567788888642 1111
Q ss_pred --------Hhh----h-ccCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 173 --------YET----I-SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 173 --------~Ea----~-~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
.+. . ...|+||-++... .++.....++++-.++..
T Consensus 288 ~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~----~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 288 VVETGRKLAKLVVEKAGREPDIVFEHTGRV----TFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSEEEECSCHH----HHHHHHHHSCTTCEEEES
T ss_pred cchhhhHHHHHHHHHhCCCceEEEECCCch----HHHHHHHHHhcCCEEEEE
Confidence 111 1 2589999998863 344555667777666544
No 410
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=91.63 E-value=0.16 Score=50.60 Aligned_cols=68 Identities=22% Similarity=0.159 Sum_probs=44.2
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc-hhHHHHHHcCccccCCCcCC---HHhhhccCCEE
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGD---IYETISGSDLV 182 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~~~~~---~~Ea~~~ADiV 182 (434)
.+.| +||+|||.|..|..+++.+++. |++|++.+.... .....+ +.... ....+ +.+.++++|+|
T Consensus 11 ~~~~-k~IlIlG~G~~g~~la~aa~~~------G~~vi~~d~~~~~~~~~~a--d~~~~--~~~~d~~~l~~~~~~~dvI 79 (389)
T 3q2o_A 11 ILPG-KTIGIIGGGQLGRMMALAAKEM------GYKIAVLDPTKNSPCAQVA--DIEIV--ASYDDLKAIQHLAEISDVV 79 (389)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSTTCTTTTTC--SEEEE--CCTTCHHHHHHHHHTCSEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeCCCCCchHHhC--CceEe--cCcCCHHHHHHHHHhCCEe
Confidence 4577 9999999999999999999998 999877654321 111111 11111 01223 55677889988
Q ss_pred EEe
Q 013877 183 LLL 185 (434)
Q Consensus 183 iLa 185 (434)
...
T Consensus 80 ~~~ 82 (389)
T 3q2o_A 80 TYE 82 (389)
T ss_dssp EES
T ss_pred eec
Confidence 543
No 411
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=91.63 E-value=1.1 Score=45.57 Aligned_cols=69 Identities=22% Similarity=0.162 Sum_probs=41.4
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc-----EEEEEecCCchh----HHHHH--HcCcccc--C-CCcCCHHhhh
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI-----VVKVGLRKGSRS----FAEAR--AAGFTEE--N-GTLGDIYETI 176 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~-----~Vivg~r~~~~s----~~~A~--~~G~~~~--~-~~~~~~~Ea~ 176 (434)
.||+||| .|.+|.+++..|... ++ .+.+.+..-... .-.+. .++..+. + ....+..+++
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~------~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~ 106 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASG------EVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVF 106 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHcC------CcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHh
Confidence 7999999 799999999999876 44 144433211221 12222 2222100 0 0023567889
Q ss_pred ccCCEEEEee
Q 013877 177 SGSDLVLLLI 186 (434)
Q Consensus 177 ~~ADiViLav 186 (434)
++||+||++-
T Consensus 107 ~daDvVVita 116 (375)
T 7mdh_A 107 EDVDWALLIG 116 (375)
T ss_dssp TTCSEEEECC
T ss_pred CCCCEEEEcC
Confidence 9999999974
No 412
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=91.60 E-value=0.29 Score=49.40 Aligned_cols=91 Identities=13% Similarity=0.110 Sum_probs=51.5
Q ss_pred CCEEEEEc-ccchHHHHHHH-HHhhhhhhcCCc---EEEEE-ecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEE
Q 013877 111 INQIGVIG-WGSQGPAQAQN-LRDSLAEAKSDI---VVKVG-LRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (434)
Q Consensus 111 ~kkIgIIG-~G~mG~A~A~n-Lrds~~~~~~G~---~Vivg-~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViL 184 (434)
|+||||+| .|.+|.-+.+. |.+. ++ .+... .++..+.............+ ..+.++ .+++|+||.
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~------~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~~--~~~~~~-~~~~DvVf~ 71 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEER------DFDAIRPVFFSTSQLGQAAPSFGGTTGTLQD--AFDLEA-LKALDIIVT 71 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT------GGGGSEEEEEESSSTTSBCCGGGTCCCBCEE--TTCHHH-HHTCSEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcC------CCCeEEEEEEEeCCCCCCccccCCCceEEEe--cCChHH-hcCCCEEEE
Confidence 57999999 99999999994 4433 33 33222 22111111000001111100 113333 578999999
Q ss_pred eecchHHHHHHHHHHhcCCCCc--EEEEecc
Q 013877 185 LISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~--iL~~s~G 213 (434)
|+|.....+..+.+.. .|. +|++.++
T Consensus 72 a~g~~~s~~~a~~~~~---~G~k~vVID~ss 99 (367)
T 1t4b_A 72 CQGGDYTNEIYPKLRE---SGWQGYWIDAAS 99 (367)
T ss_dssp CSCHHHHHHHHHHHHH---TTCCCEEEECSS
T ss_pred CCCchhHHHHHHHHHH---CCCCEEEEcCCh
Confidence 9998888877776543 454 6666654
No 413
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.57 E-value=0.51 Score=46.04 Aligned_cols=92 Identities=17% Similarity=0.057 Sum_probs=60.8
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCC-cCCHHhhhc-----cCC
Q 013877 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGT-LGDIYETIS-----GSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~-~~~~~Ea~~-----~AD 180 (434)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..+... ..+.+++.|.... |-. ..+..+.+. ..|
T Consensus 169 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------Ga~V~~~~~~~~-~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 169 AG-HWVAISGAAGGLGSLAVQYAKAM------GYRVLGIDGGEG-KEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECSTT-HHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CC-CEEEEECCCchHHHHHHHHHHHC------CCcEEEEcCCHH-HHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCC
Confidence 46 89999999 89999999999988 988877665543 4567777775310 101 123444443 479
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+||.++... ..++...+.|+++..|+..
T Consensus 241 ~vi~~~g~~---~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 241 GVINVSVSE---AAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp EEEECSSCH---HHHHHHTTSEEEEEEEEEC
T ss_pred EEEECCCcH---HHHHHHHHHHhcCCEEEEE
Confidence 999888742 3455566677776555433
No 414
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.57 E-value=0.42 Score=46.68 Aligned_cols=93 Identities=14% Similarity=0.186 Sum_probs=60.4
Q ss_pred CCCCEEEEE-cccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc-----cCCEE
Q 013877 109 NGINQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-----GSDLV 182 (434)
Q Consensus 109 ~g~kkIgII-G~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~-----~ADiV 182 (434)
.| ++|.|+ |.|.+|.+.++-++.. |.+|++..+ +++..+.+++.|....-....+..+.++ ..|+|
T Consensus 150 ~g-~~VlV~gg~G~vG~~a~qla~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EG-KTLLIINGAGGVGSIATQIAKAY------GLRVITTAS-RNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TT-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEECC-SHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEE
T ss_pred CC-CEEEEEcCCCHHHHHHHHHHHHc------CCEEEEEeC-CHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEE
Confidence 67 999999 7999999999999988 988765554 3455778888886421001123333332 47999
Q ss_pred EEeecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
|-++.... .++.....|+++-.++...
T Consensus 222 ~d~~g~~~---~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 222 FCTFNTDM---YYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EESSCHHH---HHHHHHHHEEEEEEEEESS
T ss_pred EECCCchH---HHHHHHHHhccCCEEEEEC
Confidence 99887533 3334445566666555443
No 415
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=91.54 E-value=0.18 Score=48.20 Aligned_cols=90 Identities=21% Similarity=0.188 Sum_probs=59.0
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCc-CCHHhhhccCCEEEEe
Q 013877 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GDIYETISGSDLVLLL 185 (434)
Q Consensus 109 ~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~-~~~~Ea~~~ADiViLa 185 (434)
.| ++|.|+|. |.+|...++-++.. |.+|++..++ ++..+.+++.|.... +... .+..+.+...|+||-
T Consensus 125 ~g-~~vlV~Ga~G~vG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid- 195 (302)
T 1iz0_A 125 PG-EKVLVQAAAGALGTAAVQVARAM------GLRVLAAASR-PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE- 195 (302)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESS-GGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-
Confidence 46 89999998 99999999999888 8887766654 344567777776420 0000 112233467899998
Q ss_pred ecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 186 ISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 186 vpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+... .++.....++++..++..
T Consensus 196 ~g~~----~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 196 VRGK----EVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp CSCT----THHHHHTTEEEEEEEEEC
T ss_pred CCHH----HHHHHHHhhccCCEEEEE
Confidence 7763 345555667776655533
No 416
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=91.54 E-value=0.24 Score=51.91 Aligned_cols=81 Identities=16% Similarity=0.197 Sum_probs=51.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc---EEEEEecCCchhHHHHHHcCccccCCC--cCCH----HhhhccCCEE
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGT--LGDI----YETISGSDLV 182 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~---~Vivg~r~~~~s~~~A~~~G~~~~~~~--~~~~----~Ea~~~ADiV 182 (434)
+||.|||+|.||..++..|.++. ++ +|++.+..... .+.....|+....-. ..+. ..++++.|+|
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~-----dv~~~~I~vaD~~~~~-~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvV 87 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKF-----DIKPSQVTIIAAEGTK-VDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFL 87 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHB-----CCCGGGEEEEESSCCS-CCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCC-----CCceeEEEEeccchhh-hhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEE
Confidence 57999999999999999998761 33 56666543222 233333454321111 1222 3456667999
Q ss_pred EEeecchHHHHHHHHH
Q 013877 183 LLLISDAAQADNYEKI 198 (434)
Q Consensus 183 iLavpd~a~~~vl~eI 198 (434)
|.+.++.....+++..
T Consensus 88 IN~s~~~~~l~Im~ac 103 (480)
T 2ph5_A 88 IDVSIGISSLALIILC 103 (480)
T ss_dssp EECCSSSCHHHHHHHH
T ss_pred EECCccccCHHHHHHH
Confidence 9999888777777643
No 417
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=91.53 E-value=0.3 Score=47.36 Aligned_cols=91 Identities=15% Similarity=0.164 Sum_probs=60.8
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhh------ccCC
Q 013877 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (434)
Q Consensus 109 ~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~------~~AD 180 (434)
.| ++|.|+| .|.+|.+.++-++.. |.+|++..++ .+..+.+++.|.... +....+..+.+ ...|
T Consensus 148 ~g-~~vlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 148 KG-DYVLLFAAAGGVGLILNQLLKMK------GAHTIAVAST-DEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCce
Confidence 56 8999999 899999999999988 9988766654 445678888886320 11112333322 2479
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+|+-++.... ++...+.|+++..++..
T Consensus 220 ~vid~~g~~~----~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 220 ASFDSVGKDT----FEISLAALKRKGVFVSF 246 (334)
T ss_dssp EEEECCGGGG----HHHHHHHEEEEEEEEEC
T ss_pred EEEECCChHH----HHHHHHHhccCCEEEEE
Confidence 9999998643 44444566676665544
No 418
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.53 E-value=0.38 Score=49.72 Aligned_cols=93 Identities=17% Similarity=0.266 Sum_probs=65.9
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-c-CccccCCCcCCHHh
Q 013877 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-A-GFTEENGTLGDIYE 174 (434)
Q Consensus 107 ~~~g~kkIgIIG~G----------~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-~-G~~~~~~~~~~~~E 174 (434)
.++| +||+|.|+- +-...++..|.+. |.+|.+++..- .+.++. . ++.. +.+.+|
T Consensus 319 ~~~~-~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~------g~~v~~~DP~~---~~~~~~~~~~~~~----~~~~~~ 384 (446)
T 4a7p_A 319 DVRG-KTVGILGLTFKPNTDDMRDAPSLSIIAALQDA------GATVKAYDPEG---VEQASKMLTDVEF----VENPYA 384 (446)
T ss_dssp CCTT-CEEEEECCSSSTTSCCCTTCSHHHHHHHHHHT------SCEEEEECSSC---HHHHGGGCSSCCB----CSCHHH
T ss_pred cCCC-CEEEEEEEEeCCCCcccccChHHHHHHHHHHC------CCEEEEECCCC---CHhHHHhcCCceE----ecChhH
Confidence 4688 999999997 7788999999998 99887665432 223322 2 4432 457889
Q ss_pred hhccCCEEEEeecchHHHH-HHHHHHhcCCCCcEEEEeccc
Q 013877 175 TISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 175 a~~~ADiViLavpd~a~~~-vl~eI~~~Lk~g~iL~~s~G~ 214 (434)
+++++|+|+++|.-....+ -++.+...|+. .+|++.-++
T Consensus 385 ~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~-~~i~D~r~~ 424 (446)
T 4a7p_A 385 AADGADALVIVTEWDAFRALDLTRIKNSLKS-PVLVDLRNI 424 (446)
T ss_dssp HHTTBSEEEECSCCTTTTSCCHHHHHTTBSS-CBEECSSCC
T ss_pred HhcCCCEEEEeeCCHHhhcCCHHHHHHhcCC-CEEEECCCC
Confidence 9999999999998766543 24566676754 567766553
No 419
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.51 E-value=0.32 Score=47.10 Aligned_cols=92 Identities=15% Similarity=0.154 Sum_probs=61.6
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHH-HHcCcccc-CCCcCCHHhhhc-----cCC
Q 013877 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-RAAGFTEE-NGTLGDIYETIS-----GSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A-~~~G~~~~-~~~~~~~~Ea~~-----~AD 180 (434)
.| ++|.|+|. |.+|.+.++-++.. |.+|++..++ ....+.+ ++.|.... +....+..+.+. ..|
T Consensus 149 ~g-~~vlI~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 149 NG-ETVVISGAAGAVGSVAGQIARLK------GCRVVGIAGG-AEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCce
Confidence 46 89999999 99999999999988 9988766655 3345556 67776320 111123333332 479
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
+||-++.. +.+....+.++++..++...
T Consensus 221 ~vi~~~g~----~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 221 VFFDNVGG----EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp EEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCc----chHHHHHHHHhhCCEEEEEe
Confidence 99998875 35566667787777665443
No 420
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.41 E-value=0.26 Score=48.13 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=59.7
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhhc------cCC
Q 013877 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~~------~AD 180 (434)
.| ++|.|+|. |.+|.+.++-++.. |.+|++..+. .+..+.+++.|.... +.. .+..+.+. ..|
T Consensus 159 ~g-~~VlV~Gasg~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 159 AG-ETVLVLGAAGGIGTAAIQIAKGM------GAKVIAVVNR-TAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVD 229 (342)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-GGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCce
Confidence 46 89999998 99999999999988 9988766654 445677888776421 111 23333332 489
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+||-++... .+......++++..++..
T Consensus 230 vvid~~g~~----~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 230 MVVDPIGGP----AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEESCC------CHHHHHHTEEEEEEEEEC
T ss_pred EEEECCchh----HHHHHHHhhcCCCEEEEE
Confidence 999998864 344455667776655543
No 421
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.41 E-value=0.21 Score=48.92 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=28.7
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEec
Q 013877 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 148 (434)
Q Consensus 111 ~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r 148 (434)
||||+|||-|..|..+++.+++. |+++++.+.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~------G~~vv~vd~ 32 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKA------GMKVVLVDK 32 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeC
Confidence 79999999999999999999998 998876654
No 422
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=91.40 E-value=0.47 Score=47.72 Aligned_cols=90 Identities=13% Similarity=0.098 Sum_probs=53.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEe-cC-CchhHHHHH-----------HcCccccCCCcCCHHhhhc
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGL-RK-GSRSFAEAR-----------AAGFTEENGTLGDIYETIS 177 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~-r~-~~~s~~~A~-----------~~G~~~~~~~~~~~~Ea~~ 177 (434)
.|||||| .|..|.-+.+-|.+. + .+++.... ++ ..+.....- ....... ..+. +.+.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-P----~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~---~~~~-~~~~ 78 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNH-P----YIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK---PTDP-KLMD 78 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-S----SEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE---ECCG-GGCT
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-C----CceEEEEECchhcCCChhHhcccccccccccccccceEE---eCCH-HHhc
Confidence 5899999 699999999977654 1 23443222 22 122232210 0011110 1122 3457
Q ss_pred cCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 178 ~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
++|+||+|+|.....++.+.+. +.|..+++.++
T Consensus 79 ~vDvvf~a~p~~~s~~~a~~~~---~~G~~vIDlSa 111 (359)
T 4dpk_A 79 DVDIIFSPLPQGAAGPVEEQFA---KEGFPVISNSP 111 (359)
T ss_dssp TCCEEEECCCTTTHHHHHHHHH---HTTCEEEECSS
T ss_pred CCCEEEECCChHHHHHHHHHHH---HCCCEEEEcCC
Confidence 8999999999988887777653 46777776665
No 423
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=91.40 E-value=0.47 Score=47.72 Aligned_cols=90 Identities=13% Similarity=0.098 Sum_probs=53.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEe-cC-CchhHHHHH-----------HcCccccCCCcCCHHhhhc
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGL-RK-GSRSFAEAR-----------AAGFTEENGTLGDIYETIS 177 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~-r~-~~~s~~~A~-----------~~G~~~~~~~~~~~~Ea~~ 177 (434)
.|||||| .|..|.-+.+-|.+. + .+++.... ++ ..+.....- ....... ..+. +.+.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-P----~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~---~~~~-~~~~ 78 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNH-P----YIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK---PTDP-KLMD 78 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-S----SEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE---ECCG-GGCT
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-C----CceEEEEECchhcCCChhHhcccccccccccccccceEE---eCCH-HHhc
Confidence 5899999 699999999977654 1 23443222 22 122232210 0011110 1122 3457
Q ss_pred cCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 178 ~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
++|+||+|+|.....++.+.+. +.|..+++.++
T Consensus 79 ~vDvvf~a~p~~~s~~~a~~~~---~~G~~vIDlSa 111 (359)
T 4dpl_A 79 DVDIIFSPLPQGAAGPVEEQFA---KEGFPVISNSP 111 (359)
T ss_dssp TCCEEEECCCTTTHHHHHHHHH---HTTCEEEECSS
T ss_pred CCCEEEECCChHHHHHHHHHHH---HCCCEEEEcCC
Confidence 8999999999988887777653 46777776665
No 424
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.37 E-value=0.21 Score=48.87 Aligned_cols=92 Identities=25% Similarity=0.290 Sum_probs=59.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhhc------cCC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~~------~AD 180 (434)
.| .+|.|+|.|.+|...++-++.. |. +|++ .+.+++..+.+++.|.... +....+..+.+. ..|
T Consensus 166 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 166 LG-DTVCVIGIGPVGLMSVAGANHL------GAGRIFA-VGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHTT------TCSSEEE-ECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCcEEEE-ECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCC
Confidence 46 8999999999999999988887 87 6655 4444555788888887420 111123333322 489
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+||-++.... .++.....|+++..++..
T Consensus 238 ~v~d~~g~~~---~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 238 KVVIAGGDVH---TFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EEEECSSCTT---HHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCChH---HHHHHHHHHhcCCEEEEe
Confidence 9999988632 233344456666655543
No 425
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.34 E-value=0.43 Score=46.38 Aligned_cols=91 Identities=18% Similarity=0.146 Sum_probs=60.6
Q ss_pred CCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhhc------cCC
Q 013877 109 NGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~G-~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~~------~AD 180 (434)
.| ++|.|+|.| .+|.+.++-++.. |.+|++..++. +..+.+++.|.... +....+..+.+. ..|
T Consensus 144 ~g-~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~~-~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~D 215 (340)
T 3gms_A 144 RN-DVLLVNACGSAIGHLFAQLSQIL------NFRLIAVTRNN-KHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGAD 215 (340)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESSS-TTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEeCCccHHHHHHHHHHHHc------CCEEEEEeCCH-HHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCc
Confidence 56 899999998 8999999999888 98887666554 45677888776420 111123333322 579
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+||-++......+.+ ..|+++..++..
T Consensus 216 vvid~~g~~~~~~~~----~~l~~~G~iv~~ 242 (340)
T 3gms_A 216 AAIDSIGGPDGNELA----FSLRPNGHFLTI 242 (340)
T ss_dssp EEEESSCHHHHHHHH----HTEEEEEEEEEC
T ss_pred EEEECCCChhHHHHH----HHhcCCCEEEEE
Confidence 999998865543333 567776665544
No 426
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=91.33 E-value=0.52 Score=44.23 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=32.3
Q ss_pred ccCCCCEEEEEccc---chHHHHHHHHHhhhhhhcCCcEEEEEecCCc
Q 013877 107 AFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS 151 (434)
Q Consensus 107 ~~~g~kkIgIIG~G---~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~ 151 (434)
.|+| |++-|-|.+ -+|.++|+.|.+. |.+|++..|+..
T Consensus 3 ~l~g-K~alVTGaa~~~GIG~aiA~~la~~------Ga~Vvi~~r~~~ 43 (256)
T 4fs3_A 3 NLEN-KTYVIMGIANKRSIAFGVAKVLDQL------GAKLVFTYRKER 43 (256)
T ss_dssp CCTT-CEEEEECCCSTTCHHHHHHHHHHHT------TCEEEEEESSGG
T ss_pred CCCC-CEEEEECCCCCchHHHHHHHHHHHC------CCEEEEEECCHH
Confidence 4788 999999975 3999999999999 999988887643
No 427
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.29 E-value=0.085 Score=49.43 Aligned_cols=66 Identities=15% Similarity=0.174 Sum_probs=45.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC---HHhhhcc-CCEEEEeec
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISG-SDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~---~~Ea~~~-ADiViLavp 187 (434)
++|.|+|.|.+|..+++.|.+. |++|++..|..++. ..++......+.+ +.++++. .|+||.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ------GHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 7999999999999999999999 99988777764431 1222110111222 3455666 999998875
Q ss_pred c
Q 013877 188 D 188 (434)
Q Consensus 188 d 188 (434)
.
T Consensus 73 ~ 73 (286)
T 3gpi_A 73 A 73 (286)
T ss_dssp H
T ss_pred C
Confidence 4
No 428
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=91.29 E-value=0.35 Score=47.81 Aligned_cols=65 Identities=22% Similarity=0.207 Sum_probs=47.0
Q ss_pred ccCCCCEEEEEccc---chHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEE
Q 013877 107 AFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (434)
Q Consensus 107 ~~~g~kkIgIIG~G---~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiVi 183 (434)
.|+| .||++||=| ++..|++..+..- |.+|.+...++-.. +. ...|. ..+++|++++||+|+
T Consensus 144 ~l~g-lkva~vGD~~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~-~~-~~~g~------~~d~~eav~~aDvvy 208 (304)
T 3r7f_A 144 TFKG-LTVSIHGDIKHSRVARSNAEVLTRL------GARVLFSGPSEWQD-EE-NTFGT------YVSMDEAVESSDVVM 208 (304)
T ss_dssp CCTT-CEEEEESCCTTCHHHHHHHHHHHHT------TCEEEEESCGGGSC-TT-CSSCE------ECCHHHHHHHCSEEE
T ss_pred CCCC-CEEEEEcCCCCcchHHHHHHHHHHc------CCEEEEECCCccCc-ch-hhcCc------cCCHHHHhCCCCEEE
Confidence 5788 999999975 5999999999887 99887654332111 10 12232 468999999999998
Q ss_pred Eee
Q 013877 184 LLI 186 (434)
Q Consensus 184 Lav 186 (434)
...
T Consensus 209 t~~ 211 (304)
T 3r7f_A 209 LLR 211 (304)
T ss_dssp ECC
T ss_pred ecc
Confidence 864
No 429
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.27 E-value=0.49 Score=46.64 Aligned_cols=92 Identities=15% Similarity=0.131 Sum_probs=60.8
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhhc-----cCCE
Q 013877 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (434)
Q Consensus 109 ~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~~-----~ADi 181 (434)
.| ++|.|+| .|.+|...++-++.. |.+|++..+. ....+.+++.|.... +....+..+.++ ..|+
T Consensus 163 ~g-~~VlV~Ga~G~iG~~~~q~a~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~ 234 (362)
T 2c0c_A 163 EG-KKVLVTAAAGGTGQFAMQLSKKA------KCHVIGTCSS-DEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDV 234 (362)
T ss_dssp TT-CEEEETTTTBTTHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred CC-CEEEEeCCCcHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCE
Confidence 46 8999999 799999999999988 9887665554 445677777776320 111123333332 4799
Q ss_pred EEEeecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
||-++... .++...+.|+++..++...
T Consensus 235 vid~~g~~----~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 235 VYESVGGA----MFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EEECSCTH----HHHHHHHHEEEEEEEEECC
T ss_pred EEECCCHH----HHHHHHHHHhcCCEEEEEe
Confidence 99999863 4445556666665555443
No 430
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.25 E-value=0.21 Score=49.45 Aligned_cols=87 Identities=20% Similarity=0.157 Sum_probs=56.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHH-HcCcccc-CCCcCC---HHhhhccCCEEE
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEE-NGTLGD---IYETISGSDLVL 183 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~-~~G~~~~-~~~~~~---~~Ea~~~ADiVi 183 (434)
.| ++|.|+|.|.+|...++-++.. |.+|++..+... ..+.+. +.|.... + ..+ +.++....|+||
T Consensus 187 ~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~~-~~~~~~~~lGa~~v~~--~~~~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PG-KHIGIVGLGGLGHVAVKFAKAF------GSKVTVISTSPS-KKEEALKNFGADSFLV--SRDQEQMQAAAGTLDGII 256 (366)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCGG-GHHHHHHTSCCSEEEE--TTCHHHHHHTTTCEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHhcCCceEEe--ccCHHHHHHhhCCCCEEE
Confidence 57 8999999999999999999888 988776665543 455555 6775320 1 112 223334689999
Q ss_pred Eeecch-HHHHHHHHHHhcCCCCcEEE
Q 013877 184 LLISDA-AQADNYEKIFSCMKPNSILG 209 (434)
Q Consensus 184 Lavpd~-a~~~vl~eI~~~Lk~g~iL~ 209 (434)
-++... .....+ +.|+++..++
T Consensus 257 d~~g~~~~~~~~~----~~l~~~G~iv 279 (366)
T 1yqd_A 257 DTVSAVHPLLPLF----GLLKSHGKLI 279 (366)
T ss_dssp ECCSSCCCSHHHH----HHEEEEEEEE
T ss_pred ECCCcHHHHHHHH----HHHhcCCEEE
Confidence 998854 333333 3455555444
No 431
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=91.20 E-value=0.2 Score=51.61 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=30.8
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHh-hhhhhcCCcEEEEEecC
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRK 149 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrd-s~~~~~~G~~Vivg~r~ 149 (434)
++| ++|+|+|+|++|..+|+.|+. . |.+|+...+.
T Consensus 210 l~g-ktvgI~G~G~VG~~vA~~l~~~~------G~kVv~~sD~ 245 (419)
T 1gtm_A 210 LKG-KTIAIQGYGNAGYYLAKIMSEDF------GMKVVAVSDS 245 (419)
T ss_dssp STT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEEECS
T ss_pred cCC-CEEEEEcCCHHHHHHHHHHHHhc------CCEEEEEeCC
Confidence 889 999999999999999999988 7 9988755454
No 432
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.13 E-value=0.36 Score=46.63 Aligned_cols=91 Identities=14% Similarity=0.113 Sum_probs=60.9
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhh------ccCC
Q 013877 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (434)
Q Consensus 109 ~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~------~~AD 180 (434)
.| ++|.|+| .|.+|.+.++-++.. |.+|++..+. ....+.+++.|.... +....+..+.+ ...|
T Consensus 140 ~g-~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 140 PG-EIILFHAAAGGVGSLACQWAKAL------GAKLIGTVSS-PEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEEcCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCce
Confidence 46 8999999 899999999999988 9888766654 445677777775310 11112333332 2579
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+||-++... .+....+.++++..++..
T Consensus 212 vvid~~g~~----~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 212 VVYDGVGQD----TWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp EEEESSCGG----GHHHHHTTEEEEEEEEEC
T ss_pred EEEECCChH----HHHHHHHHhcCCCEEEEE
Confidence 999988863 344555667777666544
No 433
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.12 E-value=0.38 Score=46.06 Aligned_cols=68 Identities=29% Similarity=0.235 Sum_probs=44.3
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC---HHhhhccCCE
Q 013877 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDL 181 (434)
Q Consensus 106 ~~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~---~~Ea~~~ADi 181 (434)
+..++ |+|.|.|. |-+|.++++.|.+. |++|++..|.... .++......+.+ ..+++++.|+
T Consensus 15 ~~~~~-~~vlVtGatG~iG~~l~~~L~~~------G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (347)
T 4id9_A 15 VPRGS-HMILVTGSAGRVGRAVVAALRTQ------GRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSA 80 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHT------TCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSE
T ss_pred cccCC-CEEEEECCCChHHHHHHHHHHhC------CCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCE
Confidence 56677 99999997 99999999999999 9998877776433 222110111223 4567889999
Q ss_pred EEEeec
Q 013877 182 VLLLIS 187 (434)
Q Consensus 182 ViLavp 187 (434)
||.+..
T Consensus 81 vih~A~ 86 (347)
T 4id9_A 81 VLHLGA 86 (347)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 998754
No 434
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.08 E-value=0.29 Score=47.65 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=31.4
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEec
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 148 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r 148 (434)
-.++| ++|.|||.|..|..-++.|.+. |.+|+|...
T Consensus 9 ~~l~~-k~VLVVGgG~va~rka~~Ll~~------Ga~VtViap 44 (274)
T 1kyq_A 9 HQLKD-KRILLIGGGEVGLTRLYKLMPT------GCKLTLVSP 44 (274)
T ss_dssp ECCTT-CEEEEEEESHHHHHHHHHHGGG------TCEEEEEEE
T ss_pred EEcCC-CEEEEECCcHHHHHHHHHHHhC------CCEEEEEcC
Confidence 35688 9999999999999999999998 988877654
No 435
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=91.08 E-value=0.54 Score=45.38 Aligned_cols=91 Identities=18% Similarity=0.163 Sum_probs=60.0
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccc-cCCCc-CCHHhhhc-----cCC
Q 013877 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTL-GDIYETIS-----GSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~-~~~~~-~~~~Ea~~-----~AD 180 (434)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..+. ....+.+++.|... .|-.. .+..+.+. ..|
T Consensus 145 ~g-~~vlV~Ga~ggiG~~~~~~~~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 145 GG-ETVLVSAAAGAVGSVVGQIAKLK------GCKVVGAAGS-DEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SS-CEEEEESTTBHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CC-CEEEEecCCCcHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCe
Confidence 46 89999998 99999999999988 9988766654 34456666767521 01111 23333332 479
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+||.++... .++.....++++..++..
T Consensus 217 ~vi~~~g~~----~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 217 CYFDNVGGE----FLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp EEEESSCHH----HHHHHHTTEEEEEEEEEC
T ss_pred EEEECCChH----HHHHHHHHHhcCCEEEEE
Confidence 999888753 355556677777665544
No 436
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=91.06 E-value=0.26 Score=46.72 Aligned_cols=66 Identities=20% Similarity=0.230 Sum_probs=44.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccc--cCCCcCCHHhhhccCCEEEEeec
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE--ENGTLGDIYETISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~--~~~~~~~~~Ea~~~ADiViLavp 187 (434)
++|.|.| .|.+|.++++.|.+. |++|++..|. ..... .. ++.. .|-+..+..++++++|+||.+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~-~~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND------GNTPIILTRS-IGNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESC-CC--------CCEEEECCCCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhC------CCEEEEEeCC-CCccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEccc
Confidence 7999999 699999999999999 9998877776 32222 21 3321 11111224567889999998864
No 437
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.03 E-value=0.24 Score=48.73 Aligned_cols=92 Identities=20% Similarity=0.191 Sum_probs=59.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcC-CHHhhh-ccCCEEEEe
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLG-DIYETI-SGSDLVLLL 185 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~-~~~Ea~-~~ADiViLa 185 (434)
.| ++|.|+|.|.+|...++-++.. |.+|++..++ .+..+.+++.|.... +.... +..+.+ ...|+||-+
T Consensus 179 ~g-~~VlV~GaG~vG~~~~qlak~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~ 250 (360)
T 1piw_A 179 PG-KKVGIVGLGGIGSMGTLISKAM------GAETYVISRS-SRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVC 250 (360)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESS-STTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEEC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCC-HHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEEC
Confidence 46 8999999999999999998888 9887665554 445677888886420 10011 222333 368999999
Q ss_pred ecc--hHHHHHHHHHHhcCCCCcEEEEe
Q 013877 186 ISD--AAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 186 vpd--~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+.. .. .++...+.|+++..++..
T Consensus 251 ~g~~~~~---~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 251 ASSLTDI---DFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp CSCSTTC---CTTTGGGGEEEEEEEEEC
T ss_pred CCCCcHH---HHHHHHHHhcCCCEEEEe
Confidence 875 21 233445566676655433
No 438
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=90.98 E-value=0.51 Score=47.63 Aligned_cols=68 Identities=15% Similarity=0.073 Sum_probs=47.8
Q ss_pred cCCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecC----CchhHHHHHHc--------CccccCCCcCCHHh
Q 013877 108 FNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAA--------GFTEENGTLGDIYE 174 (434)
Q Consensus 108 ~~g~kkIgIIG~G-~mG~A~A~nLrds~~~~~~G~~Vivg~r~----~~~s~~~A~~~--------G~~~~~~~~~~~~E 174 (434)
|+| .||++||=+ ++..+++..+..- |.+|.+.... ++...+.+++. ++.. +.+++|
T Consensus 186 l~g-lkva~vGD~~nva~Sl~~~l~~l------G~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~----~~d~~e 254 (353)
T 3sds_A 186 LEG-LKIAWVGDANNVLFDLAIAATKM------GVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQ----TTVPEV 254 (353)
T ss_dssp CTT-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEE----ESCHHH
T ss_pred cCC-CEEEEECCCchHHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEE----ECCHHH
Confidence 588 999999976 6788888888776 9888776433 22223344332 2332 568999
Q ss_pred hhccCCEEEEee
Q 013877 175 TISGSDLVLLLI 186 (434)
Q Consensus 175 a~~~ADiViLav 186 (434)
++++||+|+.-+
T Consensus 255 av~~aDVvytd~ 266 (353)
T 3sds_A 255 AVKDADVIVTDT 266 (353)
T ss_dssp HTTTCSEEEECC
T ss_pred HhcCCCEEEeCC
Confidence 999999998754
No 439
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.97 E-value=0.29 Score=47.23 Aligned_cols=91 Identities=18% Similarity=0.164 Sum_probs=63.4
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccc-cCCCcCC-HHhhhccCCEEEE
Q 013877 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTLGD-IYETISGSDLVLL 184 (434)
Q Consensus 108 ~~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~-~~~~~~~-~~Ea~~~ADiViL 184 (434)
-.| .+|.|+| .|.+|...++-++.. |.+|++..+ .+..+.+++.|... -+....+ ..+.++..|+||-
T Consensus 151 ~~g-~~vlV~Ga~G~vG~~a~q~a~~~------Ga~vi~~~~--~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 151 KQG-DVVLIHAGAGGVGHLAIQLAKQK------GTTVITTAS--KRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp CTT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEEC--HHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEE
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHc------CCEEEEEec--cchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEE
Confidence 356 8999997 999999999999988 988765543 23477888888742 0111223 5566678999999
Q ss_pred eecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 185 LISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
++..... ......++++-.++..
T Consensus 222 ~~g~~~~----~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 222 LVGGDVG----IQSIDCLKETGCIVSV 244 (321)
T ss_dssp SSCHHHH----HHHGGGEEEEEEEEEC
T ss_pred CCCcHHH----HHHHHhccCCCEEEEe
Confidence 9986443 4455677777666544
No 440
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=90.94 E-value=0.57 Score=46.25 Aligned_cols=70 Identities=14% Similarity=0.046 Sum_probs=50.2
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCch-hHHHHHHcCccccCCCcCCHHhhhccCCEEEE
Q 013877 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-SFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (434)
Q Consensus 107 ~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~-s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViL 184 (434)
.|+| .||++||= +++..|++..+..- |.+|.+...++-. ..+.....++.. ..+++|+++++|+|+.
T Consensus 151 ~l~g-l~ia~vGD~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~~----~~d~~eav~~aDvvy~ 219 (301)
T 2ef0_A 151 GLAG-LEVAWVGDGNNVLNSLLEVAPLA------GLKVRVATPKGYEPDPGLLKRANAFF----THDPKEAALGAHALYT 219 (301)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHTCEE----ESCHHHHHTTCSEEEE
T ss_pred CcCC-cEEEEECCCchhHHHHHHHHHHc------CCEEEEECCchhcCCHHHHhhceeEE----ECCHHHHhcCCCEEEe
Confidence 5788 99999997 79999999999887 9988776543211 111111123543 5789999999999998
Q ss_pred eec
Q 013877 185 LIS 187 (434)
Q Consensus 185 avp 187 (434)
.+=
T Consensus 220 ~~~ 222 (301)
T 2ef0_A 220 DVW 222 (301)
T ss_dssp CCC
T ss_pred cCc
Confidence 554
No 441
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=90.80 E-value=0.69 Score=46.61 Aligned_cols=99 Identities=17% Similarity=0.126 Sum_probs=53.8
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEec-C-CchhHHHHHH----cCc------------cccCC
Q 013877 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-K-GSRSFAEARA----AGF------------TEENG 167 (434)
Q Consensus 106 ~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r-~-~~~s~~~A~~----~G~------------~~~~~ 167 (434)
+....+.||||+|+|.+|+-+.+.|.+. ..++|+..++ . +........+ .|- .. ++
T Consensus 12 ~~~~~~ikVgI~G~G~iGr~llR~l~~~-----p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v-~g 85 (354)
T 3cps_A 12 ENLYFQGTLGINGFGRIGRLVLRACMER-----NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCI-NG 85 (354)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHTC-----SSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEE-TT
T ss_pred cCcCcceEEEEECCCHHHHHHHHHHHcC-----CCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEE-CC
Confidence 3344446999999999999999988765 1456655444 2 2211112111 110 00 00
Q ss_pred C---c---CCHHhhh---ccCCEEEEeecchHHHHHHHHHHhcCCCCc--EEEEecc
Q 013877 168 T---L---GDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (434)
Q Consensus 168 ~---~---~~~~Ea~---~~ADiViLavpd~a~~~vl~eI~~~Lk~g~--iL~~s~G 213 (434)
. + .++++.- .++|+||.|+|.....+..+ .+++.|. +|++.++
T Consensus 86 ~~i~v~~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~---~~l~~GakkvVId~pa 139 (354)
T 3cps_A 86 KVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKAS---LHLKGGAKKVIISAPP 139 (354)
T ss_dssp EEEEEECCSCGGGCCHHHHTCCEEEECSSSCCSHHHHG---GGGTTTCSEEEESSCC
T ss_pred eEEEEEecCChHHCCcccCCCCEEEECCCchhhHHHHH---HHHHcCCcEEEEeCCC
Confidence 0 1 1333321 47899999999877765553 4566676 6665443
No 442
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.76 E-value=0.24 Score=49.19 Aligned_cols=90 Identities=19% Similarity=0.257 Sum_probs=58.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCC---HHhhhccCCEEEE
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGD---IYETISGSDLVLL 184 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~---~~Ea~~~ADiViL 184 (434)
.| .+|.|+|.|.+|...++-++.. |.+|++..++ ++..+.+++.|.... + ..+ .+++....|+||-
T Consensus 194 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~Vi~~~~~-~~~~~~a~~lGa~~vi~--~~~~~~~~~~~~g~Dvvid 263 (369)
T 1uuf_A 194 PG-KKVGVVGIGGLGHMGIKLAHAM------GAHVVAFTTS-EAKREAAKALGADEVVN--SRNADEMAAHLKSFDFILN 263 (369)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESS-GGGHHHHHHHTCSEEEE--TTCHHHHHTTTTCEEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCcEEec--cccHHHHHHhhcCCCEEEE
Confidence 46 8999999999999999988887 8887655544 445677888886320 1 111 1222346899999
Q ss_pred eecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 185 LISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
++.... .++...+.|+++..++..
T Consensus 264 ~~g~~~---~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 264 TVAAPH---NLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp CCSSCC---CHHHHHTTEEEEEEEEEC
T ss_pred CCCCHH---HHHHHHHHhccCCEEEEe
Confidence 988532 233444566666555433
No 443
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=90.68 E-value=0.26 Score=48.92 Aligned_cols=89 Identities=11% Similarity=0.082 Sum_probs=53.2
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhc-CCcEEEEEecCCc--hhHHHHHHcCccccCCCcCCH-HhhhccCCEEEEee
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAK-SDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDI-YETISGSDLVLLLI 186 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~-~G~~Vivg~r~~~--~s~~~A~~~G~~~~~~~~~~~-~Ea~~~ADiViLav 186 (434)
+||+|+| .|.+|.-+.+.|.+. + ..++++...+..+ +... -.|... .+.+. .+..+++|+||+|+
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~----~~p~~elv~i~s~~~~G~~~~---~~~~~i---~~~~~~~~~~~~vDvVf~a~ 73 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQER----EFPVDELFLLASERSEGKTYR---FNGKTV---RVQNVEEFDWSQVHIALFSA 73 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT----TCCEEEEEEEECTTTTTCEEE---ETTEEE---EEEEGGGCCGGGCSEEEECS
T ss_pred cEEEEECCCCHHHHHHHHHHhcC----CCCCEEEEEEECCCCCCCcee---ecCcee---EEecCChHHhcCCCEEEECC
Confidence 7899999 999999999988765 0 0235444332211 1100 001110 01111 12446899999999
Q ss_pred cchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 187 SDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 187 pd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
|.....+..+.. ++.|..+++.++
T Consensus 74 g~~~s~~~a~~~---~~~G~~vId~s~ 97 (336)
T 2r00_A 74 GGELSAKWAPIA---AEAGVVVIDNTS 97 (336)
T ss_dssp CHHHHHHHHHHH---HHTTCEEEECSS
T ss_pred CchHHHHHHHHH---HHcCCEEEEcCC
Confidence 998877776654 345777776665
No 444
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=90.63 E-value=0.26 Score=47.28 Aligned_cols=77 Identities=14% Similarity=0.067 Sum_probs=50.4
Q ss_pred cccccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH-cCccccCCCcCC---HHhhhc-
Q 013877 104 LPDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGD---IYETIS- 177 (434)
Q Consensus 104 ~~~~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~-~G~~~~~~~~~~---~~Ea~~- 177 (434)
.++.+++ |+|.|.|. |-+|.++++.|.+. |++|++..|......+.... .++......+.+ +.++++
T Consensus 14 ~~~~~~~-~~vlVTGasG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~ 86 (330)
T 2pzm_A 14 LVPRGSH-MRILITGGAGCLGSNLIEHWLPQ------GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDS 86 (330)
T ss_dssp CCSTTTC-CEEEEETTTSHHHHHHHHHHGGG------TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHH
T ss_pred CcccCCC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhh
Confidence 3678889 89999997 99999999999998 99988777743321110000 122110011233 445677
Q ss_pred -cCCEEEEeec
Q 013877 178 -GSDLVLLLIS 187 (434)
Q Consensus 178 -~ADiViLavp 187 (434)
+.|+||.+..
T Consensus 87 ~~~D~vih~A~ 97 (330)
T 2pzm_A 87 FKPTHVVHSAA 97 (330)
T ss_dssp HCCSEEEECCC
T ss_pred cCCCEEEECCc
Confidence 8999999864
No 445
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=90.63 E-value=0.3 Score=44.28 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=47.8
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCchhHHHHHHcCc--cccCCC-cCCHHhhhccCCE
Q 013877 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGF--TEENGT-LGDIYETISGSDL 181 (434)
Q Consensus 108 ~~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~--~Vivg~r~~~~s~~~A~~~G~--~~~~~~-~~~~~Ea~~~ADi 181 (434)
+++ |+|.|.| .|-+|.++++.|.+. |+ +|++..|...+..... ..++ ...|-+ ..++.+++++.|+
T Consensus 16 m~~-~~vlVtGasg~iG~~l~~~L~~~------G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 16 MQN-KSVFILGASGETGRVLLKEILEQ------GLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp HTC-CEEEEECTTSHHHHHHHHHHHHH------TCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred hcC-CeEEEECCCcHHHHHHHHHHHcC------CCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHHHHHHHhcCCCE
Confidence 567 8999999 699999999999999 98 8887777643221111 1121 110100 1234567778999
Q ss_pred EEEeecc
Q 013877 182 VLLLISD 188 (434)
Q Consensus 182 ViLavpd 188 (434)
||.+...
T Consensus 88 vi~~ag~ 94 (242)
T 2bka_A 88 GFCCLGT 94 (242)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9998754
No 446
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.62 E-value=0.44 Score=46.74 Aligned_cols=91 Identities=19% Similarity=0.230 Sum_probs=60.5
Q ss_pred CCCCEEEEE-cccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhhc-----cCCE
Q 013877 109 NGINQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (434)
Q Consensus 109 ~g~kkIgII-G~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~~-----~ADi 181 (434)
.| ++|.|+ |.|.+|.+.++-++.. |.+|++..+. .+..+.+++.|.... +....+..+.+. ..|+
T Consensus 167 ~g-~~VlV~Gg~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 167 EG-ESVLIHGGTSGIGTTAIQLARAF------GAEVYATAGS-TGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEE
T ss_pred CC-CEEEEEcCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceE
Confidence 45 899999 6899999999999988 9988766654 445677777776320 111123334333 4899
Q ss_pred EEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 182 VLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
||-++.... +......|+++..++..
T Consensus 239 vid~~g~~~----~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 239 ILDMIGAAY----FERNIASLAKDGCLSII 264 (353)
T ss_dssp EEESCCGGG----HHHHHHTEEEEEEEEEC
T ss_pred EEECCCHHH----HHHHHHHhccCCEEEEE
Confidence 999998753 34445566666655544
No 447
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=90.57 E-value=0.53 Score=48.56 Aligned_cols=69 Identities=16% Similarity=0.166 Sum_probs=49.6
Q ss_pred ccCCCCEEEEEc-----cc---chHHHHHHHHHhhhhhhcCCcEEEEEecCC----chhHHH----HHHcCc--cccCCC
Q 013877 107 AFNGINQIGVIG-----WG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGF--TEENGT 168 (434)
Q Consensus 107 ~~~g~kkIgIIG-----~G---~mG~A~A~nLrds~~~~~~G~~Vivg~r~~----~~s~~~----A~~~G~--~~~~~~ 168 (434)
.|+| .||+||| +| ++..+++..+..- |.+|.+....+ +...+. +.+.|. ..
T Consensus 185 ~l~G-lkva~vgd~~~s~Gd~nnVa~Sli~~l~~l------G~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~---- 253 (418)
T 2yfk_A 185 NLKG-KKVAMTWAYSPSYGKPLSVPQGIVGLMTRL------GMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTK---- 253 (418)
T ss_dssp GGTT-CEEEEECCCCSSSCCCSHHHHHHHHHHGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEE----
T ss_pred ccCC-CEEEEEeccccccCccchHHHHHHHHHHHc------CCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEE----
Confidence 3789 9999997 34 3999999998877 99887765442 222232 334564 32
Q ss_pred cCCHHhhhccCCEEEEee
Q 013877 169 LGDIYETISGSDLVLLLI 186 (434)
Q Consensus 169 ~~~~~Ea~~~ADiViLav 186 (434)
+.+++|++++||+|+.-+
T Consensus 254 ~~d~~eav~~ADVVytd~ 271 (418)
T 2yfk_A 254 TNSMAEAFKDADVVYPKS 271 (418)
T ss_dssp ESCHHHHHTTCSEEEECC
T ss_pred EcCHHHHhcCCCEEEEcc
Confidence 568999999999999864
No 448
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.43 E-value=0.61 Score=48.73 Aligned_cols=91 Identities=12% Similarity=0.217 Sum_probs=64.3
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhh
Q 013877 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI 176 (434)
Q Consensus 107 ~~~g~kkIgIIG~G----------~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~ 176 (434)
.++| +||+|.|+- +-...++..|.+. |.+|.+++..-.. . .++.. ..+.++++
T Consensus 350 ~~~~-~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~------g~~V~~~DP~~~~-~-----~~~~~----~~~~~~~~ 412 (478)
T 3g79_A 350 KMDG-SKVAMLGWAFIKDSDDARNTPSEPYRDLCLKA------GASVMVHDPYVVN-Y-----PGVEI----SDNLEEVV 412 (478)
T ss_dssp CSTT-CEEEEECSSSSTTCSCCTTCTHHHHHHHHHHH------TCEEEEECSSCCC-B-----TTBCE----ESCHHHHH
T ss_pred CCCC-CEEEEEeeecCCCCcchhcCcHHHHHHHHHHC------CCEEEEECCCccc-c-----cCcce----ecCHHHHH
Confidence 4688 999999973 3467888888888 9988776543221 0 11221 35788999
Q ss_pred ccCCEEEEeecchHHHH-HHHHHHhcCC-CCcEEEEeccc
Q 013877 177 SGSDLVLLLISDAAQAD-NYEKIFSCMK-PNSILGLSHGF 214 (434)
Q Consensus 177 ~~ADiViLavpd~a~~~-vl~eI~~~Lk-~g~iL~~s~G~ 214 (434)
++||+|+++|.-....+ -++.+...|+ +..+|++.-++
T Consensus 413 ~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~~~i~D~rn~ 452 (478)
T 3g79_A 413 RNADAIVVLAGHSAYSSLKADWAKKVSAKANPVIIDGRNV 452 (478)
T ss_dssp TTCSEEEECSCCHHHHSCCHHHHHHHHCCSSCEEEESSSC
T ss_pred hcCCEEEEecCCHHHHhhhHHHHHHHhccCCCEEEECCCC
Confidence 99999999999777653 2456777777 36788887664
No 449
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=90.42 E-value=1.9 Score=42.54 Aligned_cols=93 Identities=16% Similarity=0.095 Sum_probs=60.7
Q ss_pred cCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccc-cCCCcCCHHhhhc-----cCC
Q 013877 108 FNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTLGDIYETIS-----GSD 180 (434)
Q Consensus 108 ~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~-~~~~~~~~~Ea~~-----~AD 180 (434)
-.| .+|.|+|. |.+|...++-++.. |.+|++.. . ++..+.+++.|... -+....+..+.++ ..|
T Consensus 163 ~~g-~~VlV~Ga~G~vG~~a~qla~~~------Ga~Vi~~~-~-~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKP-VYVLVYGGSTATATVTMQMLRLS------GYIPIATC-S-PHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSC-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEE-C-GGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCC-cEEEEECCCcHHHHHHHHHHHHC------CCEEEEEe-C-HHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCcc
Confidence 467 89999999 89999999999888 98876543 3 45678899998742 0111123333332 389
Q ss_pred EEEEeecchHHHHHHHHHHhcC-CCCcEEEEec
Q 013877 181 LVLLLISDAAQADNYEKIFSCM-KPNSILGLSH 212 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~L-k~g~iL~~s~ 212 (434)
+||-++..... ++.....| +++-.++...
T Consensus 234 ~v~d~~g~~~~---~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 234 YALDCITNVES---TTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEEESSCSHHH---HHHHHHHSCTTCEEEEESS
T ss_pred EEEECCCchHH---HHHHHHHhhcCCCEEEEEe
Confidence 99999986432 33334455 4665555443
No 450
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.41 E-value=0.87 Score=46.86 Aligned_cols=96 Identities=18% Similarity=0.138 Sum_probs=64.9
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc-------------Ccc
Q 013877 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------GFT 163 (434)
Q Consensus 107 ~~~g~kkIgIIG~G----------~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~-------------G~~ 163 (434)
.++| +||+|.|+- +-...++..|.+. |.+|.+++..-.. .+..... ++.
T Consensus 326 ~~~~-~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~------g~~v~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 397 (467)
T 2q3e_A 326 TVTD-KKIAILGFAFKKDTGDTRESSSIYISKYLMDE------GAHLHIYDPKVPR-EQIVVDLSHPGVSEDDQVSRLVT 397 (467)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSSCH-HHHHHHHCC------CHHHHHEE
T ss_pred ccCC-CEEEEEeeccCCCCcchhhChHHHHHHHHHHC------CCEEEEEcCccCH-HHHhhhhccccccccccccCcee
Confidence 4688 999999986 3677888888888 9988776543221 1111111 222
Q ss_pred ccCCCcCCHHhhhccCCEEEEeecchHHHHH-HHHHHhcCCCCcEEEEeccc
Q 013877 164 EENGTLGDIYETISGSDLVLLLISDAAQADN-YEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 164 ~~~~~~~~~~Ea~~~ADiViLavpd~a~~~v-l~eI~~~Lk~g~iL~~s~G~ 214 (434)
. +.+..|++++||.|+++|.-.....+ ++.+...|+...+|.+.-++
T Consensus 398 ~----~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~ 445 (467)
T 2q3e_A 398 I----SKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRV 445 (467)
T ss_dssp E----CSSHHHHHTTCSEEEECSCCGGGGGSCHHHHHHHSCSSCEEEESSCT
T ss_pred e----cCCHHHHHhCCcEEEEecCChhhhcCCHHHHHHhcCCCCEEEeCCCc
Confidence 1 34778899999999999998776542 45677777765557776553
No 451
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=90.32 E-value=0.66 Score=47.14 Aligned_cols=91 Identities=14% Similarity=0.195 Sum_probs=54.2
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC-cEEEE-E-ec-CCchhHHHHHHcCccc--------cCCCcC--CHHhhh
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVKV-G-LR-KGSRSFAEARAAGFTE--------ENGTLG--DIYETI 176 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G-~~Viv-g-~r-~~~~s~~~A~~~G~~~--------~~~~~~--~~~Ea~ 176 (434)
.|||||| .|..|.-+.+-|.+. . .++.. . .+ ...+..... ..+.. .+-.+. +.++.+
T Consensus 20 ~kVaIvGAtG~vG~ell~lL~~h------p~~el~~l~aS~~saGk~~~~~--~~~~~~~~~p~~~~~~~v~~~~~~~~~ 91 (381)
T 3hsk_A 20 KKAGVLGATGSVGQRFILLLSKH------PEFEIHALGASSRSAGKKYKDA--ASWKQTETLPETEQDIVVQECKPEGNF 91 (381)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC------SSEEEEEEEECTTTTTSBHHHH--CCCCCSSCCCHHHHTCBCEESSSCTTG
T ss_pred cEEEEECCCChHHHHHHHHHHcC------CCceEEEeeccccccCCCHHHh--cccccccccccccccceEEeCchhhhc
Confidence 5899999 699999999877654 3 35432 2 12 222333221 11100 000011 222146
Q ss_pred ccCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 177 ~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
+++|+||+|+|.....++.+++. +.|..|++.++
T Consensus 92 ~~~Dvvf~alp~~~s~~~~~~~~---~~G~~VIDlSa 125 (381)
T 3hsk_A 92 LECDVVFSGLDADVAGDIEKSFV---EAGLAVVSNAK 125 (381)
T ss_dssp GGCSEEEECCCHHHHHHHHHHHH---HTTCEEEECCS
T ss_pred ccCCEEEECCChhHHHHHHHHHH---hCCCEEEEcCC
Confidence 78999999999988888877654 45777776665
No 452
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=90.25 E-value=0.97 Score=47.21 Aligned_cols=91 Identities=10% Similarity=0.102 Sum_probs=56.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc-CccccCCCcCCHH---h-hhccCCEEEEee
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIY---E-TISGSDLVLLLI 186 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~~~~~~~~~---E-a~~~ADiViLav 186 (434)
+.|.|+|+|..|..+++.|.+. |++|++.+. +++..+.+.+. |+..-.+...+.+ + -+++||.|++ +
T Consensus 128 ~hviI~G~g~~g~~la~~L~~~------~~~vvvid~-~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~-t 199 (565)
T 4gx0_A 128 GHILIFGIDPITRTLIRKLESR------NHLFVVVTD-NYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA-N 199 (565)
T ss_dssp SCEEEESCCHHHHHHHHHTTTT------TCCEEEEES-CHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE-C
T ss_pred CeEEEECCChHHHHHHHHHHHC------CCCEEEEEC-CHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE-e
Confidence 6799999999999999999988 888766554 45556667666 7643222223322 1 3678999998 5
Q ss_pred cchHHH-HHHHHHHhcCCCCcEEEEe
Q 013877 187 SDAAQA-DNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 187 pd~a~~-~vl~eI~~~Lk~g~iL~~s 211 (434)
+++... .+.. ....+..-.++.-+
T Consensus 200 ~~D~~n~~~~~-~ar~~~~~~iiar~ 224 (565)
T 4gx0_A 200 LSDPDNANLCL-TVRSLCQTPIIAVV 224 (565)
T ss_dssp SCHHHHHHHHH-HHHTTCCCCEEEEC
T ss_pred CCcHHHHHHHH-HHHHhcCceEEEEE
Confidence 544432 2222 33344433455433
No 453
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=90.23 E-value=1 Score=44.39 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=59.8
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHh-hhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc-----cCCE
Q 013877 109 NGINQIGVIG-WGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-----GSDL 181 (434)
Q Consensus 109 ~g~kkIgIIG-~G~mG~A~A~nLrd-s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~-----~ADi 181 (434)
.| .+|.|+| .|.+|...++-++. . |.+|++..+ +++..+.+++.|....-....+..+.+. ..|+
T Consensus 171 ~g-~~VlV~Ga~G~vG~~a~qlak~~~------g~~Vi~~~~-~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AA-PAILIVGGAGGVGSIAVQIARQRT------DLTVIATAS-RPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SE-EEEEEESTTSHHHHHHHHHHHHHC------CSEEEEECS-SHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHhc------CCEEEEEeC-CHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceE
Confidence 56 8999999 99999999988886 5 777765444 4455778888886421001123333332 5799
Q ss_pred EEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 182 VLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
||-++... ..++.....++++..++..
T Consensus 243 vid~~g~~---~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTHTD---KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSCHH---HHHHHHHHHSCTTCEEEEC
T ss_pred EEECCCch---hhHHHHHHHhcCCCEEEEE
Confidence 99988754 2344445567777666544
No 454
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=90.21 E-value=0.32 Score=47.62 Aligned_cols=76 Identities=16% Similarity=0.093 Sum_probs=48.5
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCC-cEEEEEecCCchhHHHHH-HcCccccCCCcCC---HHhhhccC
Q 013877 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEAR-AAGFTEENGTLGD---IYETISGS 179 (434)
Q Consensus 106 ~~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G-~~Vivg~r~~~~s~~~A~-~~G~~~~~~~~~~---~~Ea~~~A 179 (434)
..+++ |+|.|.|. |.+|.++++.|.+. | ++|++..|......+... ..++....+.+.+ +.+++++.
T Consensus 28 ~~~~~-~~ilVtGatG~iG~~l~~~L~~~------g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~ 100 (377)
T 2q1s_A 28 SKLAN-TNVMVVGGAGFVGSNLVKRLLEL------GVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEY 100 (377)
T ss_dssp GGGTT-CEEEEETTTSHHHHHHHHHHHHT------TCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCC
T ss_pred HHhCC-CEEEEECCccHHHHHHHHHHHHc------CCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCC
Confidence 34677 89999995 99999999999998 9 998776665332211110 1122110111233 34567789
Q ss_pred CEEEEeecc
Q 013877 180 DLVLLLISD 188 (434)
Q Consensus 180 DiViLavpd 188 (434)
|+||.+...
T Consensus 101 d~Vih~A~~ 109 (377)
T 2q1s_A 101 DYVFHLATY 109 (377)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999988653
No 455
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=90.12 E-value=0.54 Score=39.52 Aligned_cols=92 Identities=18% Similarity=0.125 Sum_probs=54.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc--cCCEEEEeecch
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~--~ADiViLavpd~ 189 (434)
+++.|||.|..|..++..|++. .|++++...+.+..... ..-.|+.+. + ..++.+.++ +.|.|++++|..
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~-----~g~~vvg~~d~~~~~~g-~~i~g~pV~-g-~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQG-----KEFHPIAFIDDDRKKHK-TTMQGITIY-R-PKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-----SSEEEEEEECSCGGGTT-CEETTEEEE-C-GGGHHHHHHHHTCCEEEECCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCcEEEEEEECCcccCC-CEecCeEEE-C-HHHHHHHHHHCCCCEEEEeCCCC
Confidence 7899999999999999999875 16777555554332110 001344431 1 234555554 578999999964
Q ss_pred HH---HHHHHHHHhcCCCCcEEEEeccc
Q 013877 190 AQ---ADNYEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 190 a~---~~vl~eI~~~Lk~g~iL~~s~G~ 214 (434)
.. .+++..+. +.|..+.+...+
T Consensus 77 ~~~~~~~i~~~l~---~~gv~v~~vP~~ 101 (141)
T 3nkl_A 77 SQVQKKVIIESLA---KLHVEVLTIPNL 101 (141)
T ss_dssp CHHHHHHHHHHHH---TTTCEEEECCCH
T ss_pred CHHHHHHHHHHHH---HcCCeEEECCCH
Confidence 43 23443332 345556555544
No 456
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.09 E-value=0.38 Score=44.67 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=32.8
Q ss_pred cccCCCCEEEEEcc-cc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCc
Q 013877 106 DAFNGINQIGVIGW-GS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGS 151 (434)
Q Consensus 106 ~~~~g~kkIgIIG~-G~-mG~A~A~nLrds~~~~~~G~~Vivg~r~~~ 151 (434)
..++| |++.|.|. |. +|.++++.|.+. |.+|++..|...
T Consensus 18 ~~l~~-k~vlITGasg~GIG~~~a~~l~~~------G~~V~~~~r~~~ 58 (266)
T 3o38_A 18 GLLKG-KVVLVTAAAGTGIGSTTARRALLE------GADVVISDYHER 58 (266)
T ss_dssp STTTT-CEEEESSCSSSSHHHHHHHHHHHT------TCEEEEEESCHH
T ss_pred cCCCC-CEEEEECCCCCchHHHHHHHHHHC------CCEEEEecCCHH
Confidence 34778 99999998 85 999999999999 999887777533
No 457
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=90.09 E-value=1.3 Score=45.63 Aligned_cols=63 Identities=19% Similarity=0.248 Sum_probs=45.4
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecc
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd 188 (434)
|||.|.| .|.+|.++++.|.+. |++|++..|...+. ..+.. |- .....++++++|+||.+...
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~------G~~V~~l~R~~~~~------~~v~~-d~-~~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTG------GHEVIQLVRKEPKP------GKRFW-DP-LNPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESSSCCT------TCEEC-CT-TSCCTTTTTTCSEEEECCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCCCCc------cceee-cc-cchhHHhcCCCCEEEECCCC
Confidence 8999999 699999999999999 99988777764431 11211 10 12345678899999987653
No 458
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=90.08 E-value=1.3 Score=42.04 Aligned_cols=71 Identities=17% Similarity=0.144 Sum_probs=44.3
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCC-chhH---HHHHHcC-ccccCCCcCC---HHhhhcc--C
Q 013877 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSF---AEARAAG-FTEENGTLGD---IYETISG--S 179 (434)
Q Consensus 111 ~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~-~~s~---~~A~~~G-~~~~~~~~~~---~~Ea~~~--A 179 (434)
||+|.|.| .|-+|.++++.|.+. |++|++..|.. .... +.....+ +......+.+ +.+++++ .
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 74 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ------GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMP 74 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC------CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCC
Confidence 58999999 699999999999998 99987766532 1111 1111122 2110111223 3456777 9
Q ss_pred CEEEEeec
Q 013877 180 DLVLLLIS 187 (434)
Q Consensus 180 DiViLavp 187 (434)
|+||.+..
T Consensus 75 d~vih~A~ 82 (347)
T 1orr_A 75 DSCFHLAG 82 (347)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99998865
No 459
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=90.06 E-value=0.68 Score=45.89 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=51.6
Q ss_pred cccCCCCEEEEEcc---cchHHHHHHHHHhhhhhhcCCcEEEEEecC----CchhHHHHHHcCccccCCCcCCHHhhhcc
Q 013877 106 DAFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAAGFTEENGTLGDIYETISG 178 (434)
Q Consensus 106 ~~~~g~kkIgIIG~---G~mG~A~A~nLrds~~~~~~G~~Vivg~r~----~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ 178 (434)
..|+| .||++||= +++..+++..+..- .|.+|.+...+ +....+.+++.|.... ...+++|++++
T Consensus 150 g~l~g-l~va~vGD~~~~rva~Sl~~~~~~~-----~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~ 221 (310)
T 3csu_A 150 GRLDN-LHVAMVGDLKYGRTVHSLTQALAKF-----DGNRFYFIAPDALAMPQYILDMLDEKGIAWS--LHSSIEEVMAE 221 (310)
T ss_dssp SCSSS-CEEEEESCTTTCHHHHHHHHHHHTS-----SSCEEEEECCGGGCCCHHHHHHHHHTTCCEE--ECSCGGGTTTT
T ss_pred CCcCC-cEEEEECCCCCCchHHHHHHHHHhC-----CCCEEEEECCcccccCHHHHHHHHHcCCeEE--EEcCHHHHhcC
Confidence 35788 99999998 48999999888643 17787765432 2233456667775321 14689999999
Q ss_pred CCEEEEee
Q 013877 179 SDLVLLLI 186 (434)
Q Consensus 179 ADiViLav 186 (434)
||+|+...
T Consensus 222 aDvvyt~~ 229 (310)
T 3csu_A 222 VDILYMTR 229 (310)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 99999865
No 460
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=90.02 E-value=1.3 Score=43.32 Aligned_cols=71 Identities=20% Similarity=0.259 Sum_probs=46.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhH-HHHHH-cCccccCCC-cCC---HHhhhccCCEEEE
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AEARA-AGFTEENGT-LGD---IYETISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~-~~A~~-~G~~~~~~~-~~~---~~Ea~~~ADiViL 184 (434)
++|.|.| .|.+|.++++.|.+. |++|++..|+.++.. +.... .++....+. +.+ +.++++++|+||.
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~ 79 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAV------GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 79 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHT------TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence 7899999 599999999999988 998887777644321 11111 133211111 222 4567889999997
Q ss_pred eecc
Q 013877 185 LISD 188 (434)
Q Consensus 185 avpd 188 (434)
+...
T Consensus 80 ~a~~ 83 (352)
T 1xgk_A 80 NTTS 83 (352)
T ss_dssp CCCS
T ss_pred cCCC
Confidence 7653
No 461
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=90.00 E-value=1.5 Score=40.87 Aligned_cols=89 Identities=12% Similarity=0.092 Sum_probs=56.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEEEEecCCchhHHHHHHc----Cc----cccCCCcCCHHhhhccC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGSRSFAEARAA----GF----TEENGTLGDIYETISGS 179 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLr-ds~~~~~~G~~Vivg~r~~~~s~~~A~~~----G~----~~~~~~~~~~~Ea~~~A 179 (434)
.+ .+|.-||||.-+. +..|. .. |.+| ++.+.++...+.+++. |. ... ..+..+.-...
T Consensus 64 ~~-~~vLDiGcG~G~~--~~~l~~~~------~~~v-~gvd~s~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~~~f 130 (287)
T 1kpg_A 64 PG-MTLLDVGCGWGAT--MMRAVEKY------DVNV-VGLTLSKNQANHVQQLVANSENLRSKRVL---LAGWEQFDEPV 130 (287)
T ss_dssp TT-CEEEEETCTTSHH--HHHHHHHH------CCEE-EEEESCHHHHHHHHHHHHTCCCCSCEEEE---ESCGGGCCCCC
T ss_pred Cc-CEEEEECCcccHH--HHHHHHHc------CCEE-EEEECCHHHHHHHHHHHHhcCCCCCeEEE---ECChhhCCCCe
Confidence 45 7999999998443 33343 44 6665 5666655555555542 22 110 23444433668
Q ss_pred CEEEEe-----ecchHHHHHHHHHHhcCCCCcEEEE
Q 013877 180 DLVLLL-----ISDAAQADNYEKIFSCMKPNSILGL 210 (434)
Q Consensus 180 DiViLa-----vpd~a~~~vl~eI~~~Lk~g~iL~~ 210 (434)
|+|+.. +++.....+++++...||||..+++
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEE
Confidence 999876 4445567888999999999987654
No 462
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=89.85 E-value=0.35 Score=47.17 Aligned_cols=68 Identities=12% Similarity=0.073 Sum_probs=42.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCc-------EEEEEecCCc--hhHHHHHH--c---CccccCC-CcCCHHhh
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKVGLRKGS--RSFAEARA--A---GFTEENG-TLGDIYET 175 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~-------~Vivg~r~~~--~s~~~A~~--~---G~~~~~~-~~~~~~Ea 175 (434)
+||.|+|. |.+|.+++..|.+. |+ +|++.++... +....+.+ . .+.. +- ...+..++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~------g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~-di~~~~~~~~a 77 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG------EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLA-GLEATDDPKVA 77 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEE-EEEEESCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccC-CeEeccChHHH
Confidence 68999996 99999999999887 75 6655444321 11111111 1 1110 00 01456788
Q ss_pred hccCCEEEEee
Q 013877 176 ISGSDLVLLLI 186 (434)
Q Consensus 176 ~~~ADiViLav 186 (434)
++++|+||.+.
T Consensus 78 ~~~~D~Vih~A 88 (327)
T 1y7t_A 78 FKDADYALLVG 88 (327)
T ss_dssp TTTCSEEEECC
T ss_pred hCCCCEEEECC
Confidence 99999999874
No 463
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=89.76 E-value=1.4 Score=43.72 Aligned_cols=88 Identities=14% Similarity=0.097 Sum_probs=54.6
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecC-------------------CchhHHH---HHHc-
Q 013877 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK-------------------GSRSFAE---ARAA- 160 (434)
Q Consensus 105 ~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~-------------------~~~s~~~---A~~~- 160 (434)
...|++ .+|.|||+|..|..++++|..+ |+ ++.+.+.. ..+.... ..+.
T Consensus 31 q~~L~~-~~VlivG~GGlG~~ia~~La~~------Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln 103 (346)
T 1y8q_A 31 QKRLRA-SRVLLVGLKGLGAEIAKNLILA------GVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN 103 (346)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHHc------CCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC
Confidence 467788 9999999999999999999998 87 55555321 0121111 1111
Q ss_pred -Ccccc--CCCc-CCHHhhhccCCEEEEeecchHHHHHHHHHH
Q 013877 161 -GFTEE--NGTL-GDIYETISGSDLVLLLISDAAQADNYEKIF 199 (434)
Q Consensus 161 -G~~~~--~~~~-~~~~Ea~~~ADiViLavpd~a~~~vl~eI~ 199 (434)
++... .... ....+.+++.|+||.++-+......+.+..
T Consensus 104 p~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~ 146 (346)
T 1y8q_A 104 PMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQIC 146 (346)
T ss_dssp TTSEEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred CCeEEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHH
Confidence 11110 0001 123577889999999987766665665543
No 464
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=89.70 E-value=0.23 Score=49.39 Aligned_cols=87 Identities=17% Similarity=0.171 Sum_probs=51.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc---EEEEEecCC--chhHHHHHHcCccccCCCcCCH-HhhhccCCEEEE
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKG--SRSFAEARAAGFTEENGTLGDI-YETISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~---~Vivg~r~~--~~s~~~A~~~G~~~~~~~~~~~-~Ea~~~ADiViL 184 (434)
+||+|+| .|.+|..+.+.|.++ ++ +++...+.. .+... -.|... .+.+. .+..+++|+||+
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~------~~~~~elv~i~s~~~~g~~~~---~~g~~i---~~~~~~~~~~~~~DvV~~ 74 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDER------DFPLHRLHLLASAESAGQRMG---FAESSL---RVGDVDSFDFSSVGLAFF 74 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT------TCCCSCEEEEECTTTTTCEEE---ETTEEE---ECEEGGGCCGGGCSEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhC------CCCcEEEEEEecCCCCCCccc---cCCcce---EEecCCHHHhcCCCEEEE
Confidence 6899999 899999999998855 33 443333211 11100 011110 01111 123578999999
Q ss_pred eecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
|+|.....+..+... +.|..+++.++
T Consensus 75 a~g~~~s~~~a~~~~---~aG~kvId~Sa 100 (340)
T 2hjs_A 75 AAAAEVSRAHAERAR---AAGCSVIDLSG 100 (340)
T ss_dssp CSCHHHHHHHHHHHH---HTTCEEEETTC
T ss_pred cCCcHHHHHHHHHHH---HCCCEEEEeCC
Confidence 999887777766543 35666666554
No 465
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=89.69 E-value=0.63 Score=45.60 Aligned_cols=93 Identities=14% Similarity=0.089 Sum_probs=58.5
Q ss_pred cCCCCEEEEEcccchHHHH-HHHH-HhhhhhhcCCcE-EEEEecCCc--hhHHHHHHcCccccCCCcCCHHhhhc----c
Q 013877 108 FNGINQIGVIGWGSQGPAQ-AQNL-RDSLAEAKSDIV-VKVGLRKGS--RSFAEARAAGFTEENGTLGDIYETIS----G 178 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~-A~nL-rds~~~~~~G~~-Vivg~r~~~--~s~~~A~~~G~~~~~~~~~~~~Ea~~----~ 178 (434)
+++ .+|.|+|.|.+|... ++-+ +.. |.+ |++..+..+ ...+.+++.|....+....+..+ +. .
T Consensus 171 ~~~-~~VlV~GaG~vG~~a~iqla~k~~------Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~gg 242 (357)
T 2b5w_A 171 WDP-SSAFVLGNGSLGLLTLAMLKVDDK------GYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED-VPDVYEQ 242 (357)
T ss_dssp CCC-CEEEEECCSHHHHHHHHHHHHCTT------CCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSCC
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHHHc------CCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHH-HHHhCCC
Confidence 345 899999999999999 8877 666 886 766555433 04678888887531111123333 32 4
Q ss_pred CCEEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 179 ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
.|+||-++.... .++.....++++-.++..
T Consensus 243 ~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 243 MDFIYEATGFPK---HAIQSVQALAPNGVGALL 272 (357)
T ss_dssp EEEEEECSCCHH---HHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCCChH---HHHHHHHHHhcCCEEEEE
Confidence 799999988642 233444556666555533
No 466
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=89.65 E-value=0.84 Score=42.71 Aligned_cols=92 Identities=16% Similarity=0.131 Sum_probs=59.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH----cCccccCCCcCCHHhhh--ccCCEE
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGFTEENGTLGDIYETI--SGSDLV 182 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~----~G~~~~~~~~~~~~Ea~--~~ADiV 182 (434)
.+ ++|.-||||.-. ++..+.+. |.+| ++.+.++...+.|++ .|... .-...+..+.+ ...|+|
T Consensus 120 ~~-~~VLDiGcG~G~--l~~~la~~------g~~v-~gvDi~~~~v~~a~~n~~~~~~~v-~~~~~d~~~~~~~~~fD~V 188 (254)
T 2nxc_A 120 PG-DKVLDLGTGSGV--LAIAAEKL------GGKA-LGVDIDPMVLPQAEANAKRNGVRP-RFLEGSLEAALPFGPFDLL 188 (254)
T ss_dssp TT-CEEEEETCTTSH--HHHHHHHT------TCEE-EEEESCGGGHHHHHHHHHHTTCCC-EEEESCHHHHGGGCCEEEE
T ss_pred CC-CEEEEecCCCcH--HHHHHHHh------CCeE-EEEECCHHHHHHHHHHHHHcCCcE-EEEECChhhcCcCCCCCEE
Confidence 45 899999999933 44456666 6654 577766666665554 34210 00123554433 357999
Q ss_pred EEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 183 LLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 183 iLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+...+......+++++...|+||..++++
T Consensus 189 v~n~~~~~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 189 VANLYAELHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp EEECCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCcHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 98777666678888899999999877654
No 467
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=89.57 E-value=0.74 Score=47.16 Aligned_cols=72 Identities=15% Similarity=0.143 Sum_probs=49.6
Q ss_pred cccCCCCEEEEEcc-----c---chHHHHHHHHHhhhhhhcCCcEEEEEecC----CchhHH----HHHHcCccccCCCc
Q 013877 106 DAFNGINQIGVIGW-----G---SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFA----EARAAGFTEENGTL 169 (434)
Q Consensus 106 ~~~~g~kkIgIIG~-----G---~mG~A~A~nLrds~~~~~~G~~Vivg~r~----~~~s~~----~A~~~G~~~~~~~~ 169 (434)
+-++| +||+|||. | ++..|++..+..- |.+|.+...+ .+...+ .+.+.|.... .+
T Consensus 187 ~~l~G-lkva~vgd~~~~~G~~nnVa~Sli~~~~~l------G~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~--~~ 257 (399)
T 3q98_A 187 ENLKG-KKIAMTWAYSPSYGKPLSVPQGIIGLMTRF------GMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFR--QV 257 (399)
T ss_dssp GGGTT-CEEEEECCCCSSCCCCTHHHHHHHHHHGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EE
T ss_pred cccCC-CEEEEEEecccccCcchHHHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE--EE
Confidence 34788 99999984 4 6889998888777 9888776543 222222 2345564210 15
Q ss_pred CCHHhhhccCCEEEEee
Q 013877 170 GDIYETISGSDLVLLLI 186 (434)
Q Consensus 170 ~~~~Ea~~~ADiViLav 186 (434)
.+++|++++||+|+.-+
T Consensus 258 ~d~~eav~~aDvVytd~ 274 (399)
T 3q98_A 258 TSMEEAFKDADIVYPKS 274 (399)
T ss_dssp SCHHHHHTTCSEEEECC
T ss_pred cCHHHHhCCCCEEEecC
Confidence 78999999999998765
No 468
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=89.54 E-value=0.23 Score=50.68 Aligned_cols=69 Identities=14% Similarity=0.211 Sum_probs=47.2
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchh-HHHHHHcCccccCCCcCCHHhhhccCCEEEEee
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s-~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLav 186 (434)
+++ |+|.|||.|-.|.+.|+-|.+. |++|++.+...... ..... .|+....+. ...+.++.+|+|++..
T Consensus 3 ~~~-~~v~viG~G~~G~~~a~~l~~~------G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~--~~~~~~~~~d~vV~s~ 72 (439)
T 2x5o_A 3 YQG-KNVVIIGLGLTGLSCVDFFLAR------GVTPRVMDTRMTPPGLDKLP-EAVERHTGS--LNDEWLMAADLIVASP 72 (439)
T ss_dssp CTT-CCEEEECCHHHHHHHHHHHHTT------TCCCEEEESSSSCTTGGGSC-TTSCEEESS--CCHHHHHTCSEEEECT
T ss_pred CCC-CEEEEEeecHHHHHHHHHHHhC------CCEEEEEECCCCcchhHHhh-CCCEEEECC--CcHHHhccCCEEEeCC
Confidence 567 8999999999999999999888 99987776543221 11122 466531111 1256677899999863
No 469
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.51 E-value=0.76 Score=44.65 Aligned_cols=92 Identities=18% Similarity=0.181 Sum_probs=58.2
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhh----c--cCCE
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI----S--GSDL 181 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~----~--~ADi 181 (434)
.| .+|.|+|.|.+|...++-++.. | .+|++..+ +++..+.+++.|....-....+..+.+ . ..|+
T Consensus 171 ~g-~~vlv~GaG~vG~~a~qla~~~------g~~~Vi~~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 171 PG-STAVVIGVGGLGHVGIQILRAV------SAARVIAVDL-DDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATA 242 (345)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------CCCEEEEEES-CHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEcC-CHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeE
Confidence 46 8999999999999988888765 4 46654444 455678888888742100011222222 1 6899
Q ss_pred EEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 182 VLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 182 ViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
||-++.... .++.....|+++-.++..
T Consensus 243 v~d~~G~~~---~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 243 VFDFVGAQS---TIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EEESSCCHH---HHHHHHHHEEEEEEEEEC
T ss_pred EEECCCCHH---HHHHHHHHHhcCCEEEEE
Confidence 999998753 333444556666655544
No 470
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=89.48 E-value=2 Score=38.16 Aligned_cols=92 Identities=12% Similarity=0.118 Sum_probs=58.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHc---CccccCCCcCCHHhhhccCCEEEEe
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISGSDLVLLL 185 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~---G~~~~~~~~~~~~Ea~~~ADiViLa 185 (434)
.+ .+|.=||||.- .++..|.+. |.++ ++.+.++...+.+++. .+....+...+.... ...|+|+..
T Consensus 45 ~~-~~vLDiGcG~G--~~~~~l~~~------~~~v-~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~ 113 (220)
T 3hnr_A 45 SF-GNVLEFGVGTG--NLTNKLLLA------GRTV-YGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVST 113 (220)
T ss_dssp CC-SEEEEECCTTS--HHHHHHHHT------TCEE-EEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEE
T ss_pred CC-CeEEEeCCCCC--HHHHHHHhC------CCeE-EEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEEC
Confidence 56 89999999984 345556666 6665 5777767666666654 222111111121111 678999986
Q ss_pred -----ecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 186 -----ISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 186 -----vpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+++.....+++++...|+||..+++.
T Consensus 114 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 114 YAFHHLTDDEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred cchhcCChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 34444445888999999999877654
No 471
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=89.47 E-value=1.1 Score=46.55 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=65.2
Q ss_pred ccCCCCEEEEEcc----------cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchh--HHHHHH-cC-------ccccC
Q 013877 107 AFNGINQIGVIGW----------GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS--FAEARA-AG-------FTEEN 166 (434)
Q Consensus 107 ~~~g~kkIgIIG~----------G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s--~~~A~~-~G-------~~~~~ 166 (434)
.++| ++|+|.|+ .+-...++..|.+. |.+|.+++..-... ...... .+ +..
T Consensus 332 ~~~~-~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~------g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~-- 402 (481)
T 2o3j_A 332 TVTD-KKIAIFGFAFKKNTGDTRESSAIHVIKHLMEE------HAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITV-- 402 (481)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEE--
T ss_pred ccCC-CeEEEEeeeeCCCCCccccChHHHHHHHHHHC------CCEEEEECCCCCchhhHHHHHhhhccccccCceee--
Confidence 4688 99999997 35667788888887 88887665432211 112221 11 221
Q ss_pred CCcCCHHhhhccCCEEEEeecchHHHHH-HHHHHhcCCCCcEEEEeccc
Q 013877 167 GTLGDIYETISGSDLVLLLISDAAQADN-YEKIFSCMKPNSILGLSHGF 214 (434)
Q Consensus 167 ~~~~~~~Ea~~~ADiViLavpd~a~~~v-l~eI~~~Lk~g~iL~~s~G~ 214 (434)
+.+..|+++++|.|+++|.-.....+ ++++...|+...+|.+.-++
T Consensus 403 --~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~ 449 (481)
T 2o3j_A 403 --ESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLI 449 (481)
T ss_dssp --ESSHHHHHTTCSEEEECSCCGGGTTSCHHHHHHHSCSSCEEEESSSC
T ss_pred --cCCHHHHHcCCCEEEEcCCcHHhhccCHHHHHHhcCCCCEEEECCCC
Confidence 35678899999999999997776543 55677778776677777654
No 472
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.40 E-value=0.21 Score=49.71 Aligned_cols=34 Identities=32% Similarity=0.282 Sum_probs=29.8
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEec
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 148 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r 148 (434)
+.+ ++|+|||.|..|..+++.+++. |++|++.+.
T Consensus 10 ~~~-~~IlIlG~G~lg~~la~aa~~l------G~~viv~d~ 43 (377)
T 3orq_A 10 KFG-ATIGIIGGGQLGKMMAQSAQKM------GYKVVVLDP 43 (377)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEES
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEEC
Confidence 455 9999999999999999999998 999877654
No 473
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.34 E-value=0.57 Score=45.11 Aligned_cols=91 Identities=14% Similarity=0.118 Sum_probs=57.5
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhh------ccCC
Q 013877 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (434)
Q Consensus 109 ~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~------~~AD 180 (434)
.| ++|.|+| .|.+|.+.++.++.. |.+|++..++ ....+.+++.|.... +....+..+.+ ...|
T Consensus 140 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 140 PD-EQFLFHAAAGGVGLIACQWAKAL------GAKLIGTVGT-AQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCce
Confidence 46 8999999 799999999999988 9888766554 444566666665310 11111222222 1479
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+||.++... .++...+.|+++..++..
T Consensus 212 ~vi~~~g~~----~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 212 VVYDSVGRD----TWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp EEEECSCGG----GHHHHHHTEEEEEEEEEC
T ss_pred EEEECCchH----HHHHHHHHhcCCCEEEEE
Confidence 999998743 344445566666555433
No 474
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.19 E-value=1 Score=45.18 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=30.5
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEe
Q 013877 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGL 147 (434)
Q Consensus 105 ~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~ 147 (434)
.+.+++ ++|.|||+|-.|.++|++|..+ |+ ++.+.+
T Consensus 29 ~~kL~~-~~VlIvGaGGlGs~va~~La~a------GVg~ItlvD 65 (340)
T 3rui_A 29 LDIIKN-TKVLLLGAGTLGCYVSRALIAW------GVRKITFVD 65 (340)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEEC
T ss_pred HHHHhC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEec
Confidence 367888 9999999999999999999998 87 555543
No 475
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=89.16 E-value=1.6 Score=39.31 Aligned_cols=91 Identities=14% Similarity=0.211 Sum_probs=54.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH----cCccc-cCCCcCCHHh---hhccCC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGFTE-ENGTLGDIYE---TISGSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~----~G~~~-~~~~~~~~~E---a~~~AD 180 (434)
++ .+|.-||||. | .++..|.+. +.+| ++.+.++...+.|++ .|+.. ..-...+..+ .....|
T Consensus 55 ~~-~~vLDlGcG~-G-~~~~~la~~------~~~v-~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D 124 (204)
T 3njr_A 55 RG-ELLWDIGGGS-G-SVSVEWCLA------GGRA-ITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPE 124 (204)
T ss_dssp TT-CEEEEETCTT-C-HHHHHHHHT------TCEE-EEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCS
T ss_pred CC-CEEEEecCCC-C-HHHHHHHHc------CCEE-EEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCC
Confidence 45 8999999998 3 344455555 5565 566666655555554 23320 0000223333 234689
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+|++.... ... +++++...|+||..+++.
T Consensus 125 ~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 125 AVFIGGGG-SQA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp EEEECSCC-CHH-HHHHHHHHSCTTCEEEEE
T ss_pred EEEECCcc-cHH-HHHHHHHhcCCCcEEEEE
Confidence 99976533 233 888899999999876644
No 476
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=89.09 E-value=1.5 Score=37.44 Aligned_cols=94 Identities=13% Similarity=0.094 Sum_probs=54.7
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH----cCccccCCCcCCHHhhh----ccCC
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGFTEENGTLGDIYETI----SGSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~----~G~~~~~~~~~~~~Ea~----~~AD 180 (434)
.+ .+|.-||+|. | .++..+.+.. .+.+| ++.+.++...+.|++ .|....--...+..+.+ ...|
T Consensus 25 ~~-~~vldiG~G~-G-~~~~~l~~~~----~~~~v-~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D 96 (178)
T 3hm2_A 25 PH-ETLWDIGGGS-G-SIAIEWLRST----PQTTA-VCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPD 96 (178)
T ss_dssp TT-EEEEEESTTT-T-HHHHHHHTTS----SSEEE-EEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCS
T ss_pred CC-CeEEEeCCCC-C-HHHHHHHHHC----CCCeE-EEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCC
Confidence 45 7999999997 3 3444444431 03354 577776666666654 23320000012221222 5689
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+|++.-+... ..+++++...|+||..+++.
T Consensus 97 ~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 97 VIFIGGGLTA-PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp EEEECC-TTC-TTHHHHHHHTCCTTCEEEEE
T ss_pred EEEECCcccH-HHHHHHHHHhcCCCCEEEEE
Confidence 9997766544 66888899999999877644
No 477
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.08 E-value=1.7 Score=42.50 Aligned_cols=92 Identities=9% Similarity=-0.007 Sum_probs=56.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcE-EEEEecCCchhHHHHHHcCccccCCCc-----CCHHhhh------
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENGTL-----GDIYETI------ 176 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~-Vivg~r~~~~s~~~A~~~G~~~~~~~~-----~~~~Ea~------ 176 (434)
.| ++|.|+|.|.+|...++-++.. |.+ |++..+ +++..+.+++.+-...+... .+..+.+
T Consensus 179 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~-~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 179 LG-DPVLICGAGPIGLITMLCAKAA------GACPLVITDI-DEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHT------TCCSEEEEES-CHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECC-CHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCC
Confidence 56 8999999999999999988888 886 654444 34556677665311000000 1122222
Q ss_pred ccCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 177 ~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
...|+||-++.... .++.....|+++-.++..
T Consensus 251 ~g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 251 IEPAVALECTGVES---SIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp CCCSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCCCEEEECCCChH---HHHHHHHHhcCCCEEEEE
Confidence 25899999998642 334444567777666543
No 478
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.04 E-value=1.8 Score=40.40 Aligned_cols=44 Identities=9% Similarity=-0.016 Sum_probs=33.1
Q ss_pred ccccccccccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecC
Q 013877 99 DLFNLLPDAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (434)
Q Consensus 99 ~~f~~~~~~~~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~ 149 (434)
|..+.....++| |+|.|.| .|-+|.++++.|.+. |.+|++..|.
T Consensus 20 ~~~~~~~~~l~~-k~vlITGasggIG~~la~~L~~~------G~~V~~~~r~ 64 (272)
T 1yb1_A 20 GHMPKRRKSVTG-EIVLITGAGHGIGRLTAYEFAKL------KSKLVLWDIN 64 (272)
T ss_dssp -----CCCCCTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESC
T ss_pred cccCCcccccCC-CEEEEECCCchHHHHHHHHHHHC------CCEEEEEEcC
Confidence 444444566888 9999998 568999999999998 9998877765
No 479
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=88.85 E-value=0.64 Score=46.64 Aligned_cols=70 Identities=10% Similarity=0.027 Sum_probs=48.0
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC----chhHHH----HHHcCccccCCCcCCHHhhhc
Q 013877 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGFTEENGTLGDIYETIS 177 (434)
Q Consensus 107 ~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~----~~s~~~----A~~~G~~~~~~~~~~~~Ea~~ 177 (434)
.|+| .||++||= +++..|++..+..- |.+|.+...++ +...+. +.+.|.... .+.+++ +++
T Consensus 172 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~--~~~d~~-av~ 241 (339)
T 4a8t_A 172 KLED-CKVVFVGDATQVCFSLGLITTKM------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL--VTDDAS-SVE 241 (339)
T ss_dssp CGGG-CEEEEESSCCHHHHHHHHHHHHT------TCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEE--EECCGG-GGT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE--EECChh-HHc
Confidence 5788 99999995 58889999888877 98887664332 222222 344563210 146788 999
Q ss_pred cCCEEEEee
Q 013877 178 GSDLVLLLI 186 (434)
Q Consensus 178 ~ADiViLav 186 (434)
+||+|+.-+
T Consensus 242 ~aDvvytd~ 250 (339)
T 4a8t_A 242 GADFLYTDV 250 (339)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEecC
Confidence 999999643
No 480
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=88.84 E-value=0.88 Score=45.42 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=31.2
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEec
Q 013877 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (434)
Q Consensus 105 ~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r 148 (434)
.+.+++ .+|.|||+|-.|..++++|..+ |+ ++.+.++
T Consensus 113 q~~L~~-~~VlvvG~GglGs~va~~La~a------Gvg~i~lvD~ 150 (353)
T 3h5n_A 113 QDKLKN-AKVVILGCGGIGNHVSVILATS------GIGEIILIDN 150 (353)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEEEC
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHhC------CCCeEEEECC
Confidence 467888 9999999999999999999998 87 5555543
No 481
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=88.81 E-value=1.4 Score=41.94 Aligned_cols=134 Identities=14% Similarity=0.159 Sum_probs=76.2
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecchH
Q 013877 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (434)
Q Consensus 112 kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd~a 190 (434)
+|.+|+|+ |.||..+++.+.+. |++++...+.... .. + +++|+||=-+.|..
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~~~~------~~elv~~id~~~~----------~~----l-------~~~DVvIDFT~P~a 65 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVFSEK------GHELVLKVDVNGV----------EE----L-------DSPDVVIDFSSPEA 65 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEEETTEE----------EE----C-------SCCSEEEECSCGGG
T ss_pred ceeEEEEecCHHHHHHHHHHhCC------CCEEEEEEcCCCc----------cc----c-------cCCCEEEECCCHHH
Confidence 78899997 99999998866555 7877655554221 11 1 36899996666666
Q ss_pred HHHHHHHHHhcCCCCc-EEEEeccchhhhhhcccccCCCCccEEEeccCCChhh------HHHHHhhcccccCCCceEEE
Q 013877 191 QADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS------VRRLYVQGKEINGAGINSSF 263 (434)
Q Consensus 191 ~~~vl~eI~~~Lk~g~-iL~~s~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~------vr~ly~~G~~~~G~Gv~ali 263 (434)
..+.++....+ |. +|+=+.||+-...+.. ....+.+. +..+||.+--+ ++..-+.- .++-+-- +
T Consensus 66 ~~~~~~~~~~~---g~~~ViGTTG~~~~~~~~l-~~~a~~~~-vv~apNfSlGvnll~~l~~~aA~~l---~~ydiEI-i 136 (228)
T 1vm6_A 66 LPKTVDLCKKY---RAGLVLGTTALKEEHLQML-RELSKEVP-VVQAYNFSIGINVLKRFLSELVKVL---EDWDVEI-V 136 (228)
T ss_dssp HHHHHHHHHHH---TCEEEECCCSCCHHHHHHH-HHHTTTSE-EEECSCCCHHHHHHHHHHHHHHHHT---TTSEEEE-E
T ss_pred HHHHHHHHHHc---CCCEEEeCCCCCHHHHHHH-HHHHhhCC-EEEeccccHHHHHHHHHHHHHHHhc---CCCCEEE-E
Confidence 66666544332 33 4444678864432110 11223444 45889998754 11111110 0122333 3
Q ss_pred eecC----C-CCHHHHHHHHHHH
Q 013877 264 AVHQ----D-VDGRATNVALGWS 281 (434)
Q Consensus 264 av~q----d-vsg~a~e~a~~la 281 (434)
-.|. | +||.|+.++..+-
T Consensus 137 E~HH~~K~DAPSGTAl~lae~i~ 159 (228)
T 1vm6_A 137 ETHHRFKKDAPSGTAILLESALG 159 (228)
T ss_dssp EEECTTCCCSSCHHHHHHHHHTT
T ss_pred EcCCCCCCCCCCHHHHHHHHhcc
Confidence 3343 3 4889888887773
No 482
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=88.81 E-value=0.42 Score=45.87 Aligned_cols=87 Identities=15% Similarity=0.140 Sum_probs=56.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhccCCEEEEeecc
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~~ADiViLavpd 188 (434)
.| .+|.|+|.|.+|...++-++.. |.+|++.. +++..+.+++.|.... ..+.+++-...|+||-++..
T Consensus 142 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~Vi~~~--~~~~~~~~~~lGa~~v---~~d~~~v~~g~Dvv~d~~g~ 209 (315)
T 3goh_A 142 KQ-REVLIVGFGAVNNLLTQMLNNA------GYVVDLVS--ASLSQALAAKRGVRHL---YREPSQVTQKYFAIFDAVNS 209 (315)
T ss_dssp SC-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEC--SSCCHHHHHHHTEEEE---ESSGGGCCSCEEEEECC---
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEE--ChhhHHHHHHcCCCEE---EcCHHHhCCCccEEEECCCc
Confidence 56 8999999999999999999888 98876555 3456788888887531 22222222467999988875
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEe
Q 013877 189 AAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 189 ~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
... ......++++-.++..
T Consensus 210 ~~~----~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 210 QNA----AALVPSLKANGHIICI 228 (315)
T ss_dssp --------TTGGGEEEEEEEEEE
T ss_pred hhH----HHHHHHhcCCCEEEEE
Confidence 433 3445667776655544
No 483
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=88.79 E-value=0.61 Score=48.60 Aligned_cols=74 Identities=15% Similarity=0.207 Sum_probs=39.7
Q ss_pred CEEEEEcccchHHH--HHHHHHhhhhhhcCCcEEEEEecCCchhHHH--------HHHcCccccCCCcCCHHhhhccCCE
Q 013877 112 NQIGVIGWGSQGPA--QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE--------ARAAGFTEENGTLGDIYETISGSDL 181 (434)
Q Consensus 112 kkIgIIG~G~mG~A--~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~--------A~~~G~~~~~~~~~~~~Ea~~~ADi 181 (434)
+||+|||.|+.|.+ +...|....+=.+.+.+++. .+.++...+. +...|....=..+.|..|++++||+
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L-~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~gAD~ 79 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYL-MDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEGADF 79 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEE-ECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSE
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEE-ECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCCCCE
Confidence 58999999998855 33334332110111225544 4443322211 1223321100124688999999999
Q ss_pred EEEee
Q 013877 182 VLLLI 186 (434)
Q Consensus 182 ViLav 186 (434)
||+.+
T Consensus 80 Vi~~~ 84 (477)
T 3u95_A 80 IINTA 84 (477)
T ss_dssp EEECC
T ss_pred EEECc
Confidence 99986
No 484
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.75 E-value=0.73 Score=44.57 Aligned_cols=91 Identities=20% Similarity=0.262 Sum_probs=57.5
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhh------ccCC
Q 013877 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~------~~AD 180 (434)
.| ++|.|+|. |.+|.+.++-++.. |.+|++..+. ....+.+++.|.... +-...+..+.+ ...|
T Consensus 145 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------G~~Vi~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 145 PG-DYVLIHAAAGGMGHIMVPWARHL------GATVIGTVST-EEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TT-CEEEETTTTSTTHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CC-CEEEEECCccHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCe
Confidence 45 89999995 99999999999988 9888766654 334566666664310 11111222222 2479
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+||.++... .++.....++++..++..
T Consensus 217 ~vi~~~g~~----~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 217 VVYDSIGKD----TLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp EEEECSCTT----THHHHHHTEEEEEEEEEC
T ss_pred EEEECCcHH----HHHHHHHhhccCCEEEEE
Confidence 999888763 344455566666555433
No 485
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=88.63 E-value=2 Score=42.06 Aligned_cols=89 Identities=9% Similarity=0.026 Sum_probs=59.4
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCch---hHHHHHHcCccccCCCcCC--------HHhhh
Q 013877 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR---SFAEARAAGFTEENGTLGD--------IYETI 176 (434)
Q Consensus 109 ~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~---s~~~A~~~G~~~~~~~~~~--------~~Ea~ 176 (434)
.| .+|.|+|. |.+|...++-++.. |.++++..+..++ ..+.+++.|... +.+ +.+..
T Consensus 167 ~g-~~VlV~Ga~G~vG~~aiqlak~~------Ga~vi~~~~~~~~~~~~~~~~~~lGa~~----vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 167 PG-DSVIQNASNSGVGQAVIQIAAAL------GLRTINVVRDRPDIQKLSDRLKSLGAEH----VITEEELRRPEMKNFF 235 (357)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEECCCSCHHHHHHHHHHTTCSE----EEEHHHHHSGGGGGTT
T ss_pred CC-CEEEEeCCcCHHHHHHHHHHHHc------CCEEEEEecCccchHHHHHHHHhcCCcE----EEecCcchHHHHHHHH
Confidence 46 89999998 99999999988887 8877666654332 346777888642 112 12222
Q ss_pred c---cCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 177 S---GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 177 ~---~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
. ..|+||-++..... .+....++++..++...
T Consensus 236 ~~~~~~Dvvid~~g~~~~----~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 236 KDMPQPRLALNCVGGKSS----TELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSSCCCSEEEESSCHHHH----HHHHTTSCTTCEEEECC
T ss_pred hCCCCceEEEECCCcHHH----HHHHHhhCCCCEEEEEe
Confidence 2 37999999875443 23456788877666543
No 486
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=88.60 E-value=0.68 Score=44.84 Aligned_cols=91 Identities=14% Similarity=0.175 Sum_probs=59.6
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHH-HcCcccc-CCC-cCCHHhhhc-----cC
Q 013877 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEE-NGT-LGDIYETIS-----GS 179 (434)
Q Consensus 109 ~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~-~~G~~~~-~~~-~~~~~Ea~~-----~A 179 (434)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++ ....+.++ +.|.... |-. ..+..+.++ ..
T Consensus 155 ~g-~~vlI~Ga~g~iG~~~~~~a~~~------G~~V~~~~~~-~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 155 EG-ETVYVSAASGAVGQLVGQLAKMM------GCYVVGSAGS-KEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCC
Confidence 46 89999997 99999999999988 9887766554 34456665 5675310 101 113333332 47
Q ss_pred CEEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 180 DiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
|+||.++... .++.....++++..++..
T Consensus 227 d~vi~~~g~~----~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 227 DIYFENVGGK----MLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp EEEEESSCHH----HHHHHHTTEEEEEEEEEC
T ss_pred cEEEECCCHH----HHHHHHHHHhcCCEEEEE
Confidence 9999998752 455666677777666544
No 487
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=88.57 E-value=1.2 Score=41.46 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=46.1
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC---HHhhhccCCEEEEeec
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~---~~Ea~~~ADiViLavp 187 (434)
|||.|+| .|.+|.++++.|.+. .|++|++..|+.++... ....++....+.+.+ +.++++++|+||.+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-----~g~~V~~~~R~~~~~~~-~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 74 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-----HIDHFHIGVRNVEKVPD-DWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPS 74 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-----TCTTEEEEESSGGGSCG-GGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-----CCCcEEEEECCHHHHHH-hhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 5799999 599999999998864 16788777776443211 112333211111233 4567889999999876
Q ss_pred c
Q 013877 188 D 188 (434)
Q Consensus 188 d 188 (434)
.
T Consensus 75 ~ 75 (289)
T 3e48_A 75 I 75 (289)
T ss_dssp C
T ss_pred C
Confidence 4
No 488
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=88.55 E-value=0.98 Score=38.66 Aligned_cols=91 Identities=16% Similarity=0.190 Sum_probs=58.7
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHH----cCc----cccCCCcCCHHhhh---
Q 013877 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGF----TEENGTLGDIYETI--- 176 (434)
Q Consensus 108 ~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~----~G~----~~~~~~~~~~~Ea~--- 176 (434)
.++ .+|.-||+|. | .++..+.+. +.+| ++.+.++...+.+++ .|. .. ...+..+.+
T Consensus 32 ~~~-~~vldiG~G~-G-~~~~~l~~~------~~~v-~~~D~~~~~~~~a~~~~~~~~~~~~~~~---~~~d~~~~~~~~ 98 (192)
T 1l3i_A 32 GKN-DVAVDVGCGT-G-GVTLELAGR------VRRV-YAIDRNPEAISTTEMNLQRHGLGDNVTL---MEGDAPEALCKI 98 (192)
T ss_dssp CTT-CEEEEESCTT-S-HHHHHHHTT------SSEE-EEEESCHHHHHHHHHHHHHTTCCTTEEE---EESCHHHHHTTS
T ss_pred CCC-CEEEEECCCC-C-HHHHHHHHh------cCEE-EEEECCHHHHHHHHHHHHHcCCCcceEE---EecCHHHhcccC
Confidence 345 8999999998 3 445556665 5454 566665655665554 332 11 023544433
Q ss_pred ccCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 177 ~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
...|+|+..-+......+++++...|+||..+++.
T Consensus 99 ~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~ 133 (192)
T 1l3i_A 99 PDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVT 133 (192)
T ss_dssp CCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEE
Confidence 35799998776566678888999999998766543
No 489
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=88.55 E-value=0.77 Score=45.51 Aligned_cols=91 Identities=16% Similarity=0.142 Sum_probs=56.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCchhHHHHHHcCcccc-CCC---cCCHHhhhc------
Q 013877 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEE-NGT---LGDIYETIS------ 177 (434)
Q Consensus 109 ~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~-~~~---~~~~~Ea~~------ 177 (434)
.| ++|.|+|.|.+|...++-++.. | .+|++..+. ++..+.+++.|.... +.. ..+..+.+.
T Consensus 195 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~ 266 (380)
T 1vj0_A 195 AG-KTVVIQGAGPLGLFGVVIARSL------GAENVIVIAGS-PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGR 266 (380)
T ss_dssp BT-CEEEEECCSHHHHHHHHHHHHT------TBSEEEEEESC-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred CC-CEEEEECcCHHHHHHHHHHHHc------CCceEEEEcCC-HHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCC
Confidence 46 8999999999999999988888 8 487665554 455677888886420 100 001112221
Q ss_pred cCCEEEEeecchHHHHHHHHHHhcCCCCcEEEE
Q 013877 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGL 210 (434)
Q Consensus 178 ~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~ 210 (434)
..|+||-++.... .++...+.|+++-.++.
T Consensus 267 g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~ 296 (380)
T 1vj0_A 267 GADFILEATGDSR---ALLEGSELLRRGGFYSV 296 (380)
T ss_dssp CEEEEEECSSCTT---HHHHHHHHEEEEEEEEE
T ss_pred CCcEEEECCCCHH---HHHHHHHHHhcCCEEEE
Confidence 4799999987432 23333445556555543
No 490
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=88.50 E-value=0.41 Score=46.32 Aligned_cols=32 Identities=34% Similarity=0.510 Sum_probs=29.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC
Q 013877 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (434)
Q Consensus 112 kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~ 149 (434)
+||.|||.|.-|.+.|..|.+. |++|.|..+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~------G~~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH------GIKVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCEEEEecC
Confidence 6899999999999999999999 9999888653
No 491
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=88.43 E-value=0.91 Score=46.54 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=60.6
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC----ch-------hHHHHHHcCccccCCCcCCHHh
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG----SR-------SFAEARAAGFTEENGTLGDIYE 174 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg~r~~----~~-------s~~~A~~~G~~~~~~~~~~~~E 174 (434)
-++. .||.|+|.|.-|.++|+-|... |. +|++.++++ .+ ....+..... .....+++|
T Consensus 185 ~l~d-~kVVi~GAGaAG~~iA~ll~~~------Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~---~~~~~~L~e 254 (398)
T 2a9f_A 185 SLDE-VSIVVNGGGSAGLSITRKLLAA------GATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR---EFKSGTLED 254 (398)
T ss_dssp CTTS-CEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTEECCTTCCCSCCC---CHHHHHSC---TTCCCSCSH
T ss_pred CCCc-cEEEEECCCHHHHHHHHHHHHc------CCCeEEEEECCCcccCCccccchHHHHHHhhccCc---ccchhhHHH
Confidence 4455 7999999999999999999988 88 888777653 11 1122222111 111356899
Q ss_pred hhccCCEEEEeecchHHHHHHHHHHhcCCCCcEEEEe
Q 013877 175 TISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (434)
Q Consensus 175 a~~~ADiViLavpd~a~~~vl~eI~~~Lk~g~iL~~s 211 (434)
+++++|++|=+..|.... +++...|+++.+|...
T Consensus 255 av~~ADV~IG~Sapgl~T---~EmVk~Ma~~pIIfal 288 (398)
T 2a9f_A 255 ALEGADIFIGVSAPGVLK---AEWISKMAARPVIFAM 288 (398)
T ss_dssp HHHTTCSEEECCSTTCCC---HHHHHTSCSSCEEEEC
T ss_pred HhccCCEEEecCCCCCCC---HHHHHhhCCCCEEEEC
Confidence 999999987665443321 2455668888887744
No 492
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=88.31 E-value=2.7 Score=41.34 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=60.3
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhh---ccCCEEE
Q 013877 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI---SGSDLVL 183 (434)
Q Consensus 109 ~g~kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~---~~ADiVi 183 (434)
.| ++|.|+| .|.+|...++-++.. |.+|++.. . ++..+.+++.|.... +....+..+.+ ...|+||
T Consensus 183 ~g-~~VlV~Ga~G~vG~~~~qla~~~------Ga~Vi~~~-~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vi 253 (375)
T 2vn8_A 183 TG-KRVLILGASGGVGTFAIQVMKAW------DAHVTAVC-S-QDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFIL 253 (375)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEE-C-GGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEe-C-hHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEE
Confidence 46 8999999 799999999999888 88876554 3 345677888886320 11112333333 3579999
Q ss_pred EeecchHHHHHHHHHHhcCCCCcEEEEec
Q 013877 184 LLISDAAQADNYEKIFSCMKPNSILGLSH 212 (434)
Q Consensus 184 Lavpd~a~~~vl~eI~~~Lk~g~iL~~s~ 212 (434)
-++.... ..+......++++..++...
T Consensus 254 d~~g~~~--~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 254 DNVGGST--ETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ESSCTTH--HHHGGGGBCSSSCCEEEESC
T ss_pred ECCCChh--hhhHHHHHhhcCCcEEEEeC
Confidence 8887542 12344456677776665544
No 493
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=88.30 E-value=1 Score=43.86 Aligned_cols=86 Identities=13% Similarity=0.156 Sum_probs=54.2
Q ss_pred CccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCCHHhhhc
Q 013877 98 RDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS 177 (434)
Q Consensus 98 ~~~f~~~~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~~~Ea~~ 177 (434)
.+.|......++| +||++||+- .....+++. +.++.|..++.. .|..+ ....+++++
T Consensus 129 ~d~~~~~~~~~~g-~kV~vIG~f----P~i~~~~~~------~~~l~V~E~~p~--------~g~~p----~~~~~~~lp 185 (270)
T 3l5o_A 129 NDPFIMSQNEVKG-KKVGVVGHF----PHLESLLEP------ICDLSILEWSPE--------EGDYP----LPASEFILP 185 (270)
T ss_dssp CCHHHHTTTTTTT-SEEEEESCC----TTHHHHHTT------TSEEEEEESSCC--------TTCEE----GGGHHHHGG
T ss_pred cCchhhhhcccCC-CEEEEECCc----hhHHHHHhc------CCCEEEEECCCC--------CCCCC----hhHHHHhhc
Confidence 3456666677889 999999984 345567776 778887777532 23332 234567899
Q ss_pred cCCEEEEeecchHHHHHHHHHHhcCCCCcE
Q 013877 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSI 207 (434)
Q Consensus 178 ~ADiViLavpd~a~~~vl~eI~~~Lk~g~i 207 (434)
+||+||+.-. ..+-..++.|..+.++...
T Consensus 186 ~~D~viiTgs-tlvN~Tl~~lL~~~~~a~~ 214 (270)
T 3l5o_A 186 ECDYVYITCA-SVVDKTLPRLLELSRNARR 214 (270)
T ss_dssp GCSEEEEETH-HHHHTCHHHHHHHTTTSSE
T ss_pred cCCEEEEEee-hhhcCCHHHHHhhCCCCCE
Confidence 9999887532 2333455555555555443
No 494
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=88.16 E-value=0.74 Score=46.50 Aligned_cols=69 Identities=10% Similarity=0.012 Sum_probs=47.6
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC----chhHHH----HHHcCccccCCCcCCHHhhhc
Q 013877 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGFTEENGTLGDIYETIS 177 (434)
Q Consensus 107 ~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~----~~s~~~----A~~~G~~~~~~~~~~~~Ea~~ 177 (434)
.|+| .||++||= +++..|++..+..- |.+|.+...++ +...+. +.+.|.... .+.|++ +++
T Consensus 150 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~-av~ 219 (355)
T 4a8p_A 150 KLED-CKVVFVGDATQVCFSLGLITTKM------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL--VTDDAS-SVE 219 (355)
T ss_dssp CGGG-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEE--EECCGG-GGT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEE--EECCHH-HHc
Confidence 5788 99999995 58889999888877 98887664332 222222 344563210 146788 999
Q ss_pred cCCEEEEe
Q 013877 178 GSDLVLLL 185 (434)
Q Consensus 178 ~ADiViLa 185 (434)
++|+|+.-
T Consensus 220 ~aDVVytd 227 (355)
T 4a8p_A 220 GADFLYTD 227 (355)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEec
Confidence 99999963
No 495
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=88.14 E-value=0.42 Score=41.17 Aligned_cols=31 Identities=29% Similarity=0.319 Sum_probs=28.1
Q ss_pred EEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC
Q 013877 113 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (434)
Q Consensus 113 kIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~ 149 (434)
.|+|||.|.-|.+.|..|.+. |++|.|..+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~------G~~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA------GHQVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT------TCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC------CCCEEEEECC
Confidence 599999999999999999999 9999887653
No 496
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.01 E-value=1.2 Score=43.64 Aligned_cols=90 Identities=19% Similarity=0.193 Sum_probs=57.3
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCcccc-CCCcCCHHhhhc------cCC
Q 013877 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (434)
Q Consensus 109 ~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~~~~~~~Ea~~------~AD 180 (434)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..+. ++..+.+++.|.... +....+..+.+. ..|
T Consensus 170 ~g-~~vlV~GasggiG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 170 AG-ESVLVHGASGGVGLAACQIARAY------GLKILGTAGT-EEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp TT-CEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEE
T ss_pred Cc-CEEEEECCCChHHHHHHHHHHHC------CCEEEEEeCC-hhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcE
Confidence 45 89999998 99999999999988 9887766554 344567777775310 111112222221 579
Q ss_pred EEEEeecchHHHHHHHHHHhcCCCCcEEEE
Q 013877 181 LVLLLISDAAQADNYEKIFSCMKPNSILGL 210 (434)
Q Consensus 181 iViLavpd~a~~~vl~eI~~~Lk~g~iL~~ 210 (434)
+||.++... .+......++++-.++.
T Consensus 242 ~vi~~~G~~----~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 242 IIIEMLANV----NLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp EEEESCHHH----HHHHHHHHEEEEEEEEE
T ss_pred EEEECCChH----HHHHHHHhccCCCEEEE
Confidence 999888753 23444455666555543
No 497
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=87.99 E-value=3.1 Score=37.82 Aligned_cols=44 Identities=23% Similarity=0.250 Sum_probs=35.7
Q ss_pred ccccccccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCc
Q 013877 101 FNLLPDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS 151 (434)
Q Consensus 101 f~~~~~~~~g~kkIgIIG~-G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~ 151 (434)
++..+..++| |++-|.|. |-+|.++++.|.+. |++|++..|...
T Consensus 5 ~~~~~~~l~~-k~vlITGas~gIG~~ia~~l~~~------G~~V~~~~r~~~ 49 (247)
T 3i1j_A 5 YSAHPELLKG-RVILVTGAARGIGAAAARAYAAH------GASVVLLGRTEA 49 (247)
T ss_dssp CCCCTTTTTT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESCHH
T ss_pred CCCCCccCCC-CEEEEeCCCChHHHHHHHHHHHC------CCEEEEEecCHH
Confidence 4444567889 99999996 68999999999999 999887777533
No 498
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=87.94 E-value=0.63 Score=47.25 Aligned_cols=68 Identities=21% Similarity=0.130 Sum_probs=44.5
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCchhHHHHHHcCccccCCCcCC---HHhhhccCCEEE
Q 013877 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVL 183 (434)
Q Consensus 107 ~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~~~~~~~---~~Ea~~~ADiVi 183 (434)
.+.| +||+|||-|..|..+++.+++. |++|++.+.. ..+......+.+.. ....| +.++++++|+|+
T Consensus 32 ~~~~-~~IlIlG~G~lg~~~~~aa~~l------G~~v~v~d~~-~~~p~~~~ad~~~~--~~~~d~~~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 32 ILPG-AWLGMVGGGQLGRMFCFAAQSM------GYRVAVLDPD-PASPAGAVADRHLR--AAYDDEAALAELAGLCEAVS 101 (419)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-TTCHHHHHSSEEEC--CCTTCHHHHHHHHHHCSEEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCC-CcCchhhhCCEEEE--CCcCCHHHHHHHHhcCCEEE
Confidence 4567 9999999999999999999998 9998766433 22222222222221 11223 345667899988
Q ss_pred E
Q 013877 184 L 184 (434)
Q Consensus 184 L 184 (434)
.
T Consensus 102 ~ 102 (419)
T 4e4t_A 102 T 102 (419)
T ss_dssp E
T ss_pred E
Confidence 4
No 499
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=87.92 E-value=0.31 Score=49.27 Aligned_cols=87 Identities=15% Similarity=0.200 Sum_probs=52.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc---EEEEEec--CCchhHHHHHHcCccccCCCcCCH-HhhhccCCEEEE
Q 013877 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI---VVKVGLR--KGSRSFAEARAAGFTEENGTLGDI-YETISGSDLVLL 184 (434)
Q Consensus 112 kkIgIIG-~G~mG~A~A~nLrds~~~~~~G~---~Vivg~r--~~~~s~~~A~~~G~~~~~~~~~~~-~Ea~~~ADiViL 184 (434)
.||+||| .|..|.-+.+-|.+. ++ ++..... ...+.... .|... .+.+. .+.++++|+||+
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~------~~p~~el~~~as~~saG~~~~~---~~~~~---~~~~~~~~~~~~~Dvvf~ 70 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEES------TLPIDKIRYLASARSAGKSLKF---KDQDI---TIEETTETAFEGVDIALF 70 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC------CCCEEEEEEEECTTTTTCEEEE---TTEEE---EEEECCTTTTTTCSEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcC------CCCcEEEEEEEccccCCCccee---cCCCc---eEeeCCHHHhcCCCEEEE
Confidence 5899999 899999999988775 54 2222211 11111110 11100 01111 234678999999
Q ss_pred eecchHHHHHHHHHHhcCCCCcEEEEecc
Q 013877 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (434)
Q Consensus 185 avpd~a~~~vl~eI~~~Lk~g~iL~~s~G 213 (434)
|+|.....+..+.+. +.|..+++.++
T Consensus 71 a~~~~~s~~~a~~~~---~~G~~vIDlSa 96 (366)
T 3pwk_A 71 SAGSSTSAKYAPYAV---KAGVVVVDNTS 96 (366)
T ss_dssp CSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CCChHhHHHHHHHHH---HCCCEEEEcCC
Confidence 999888877776653 45777777665
No 500
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=87.87 E-value=0.78 Score=49.36 Aligned_cols=35 Identities=14% Similarity=0.194 Sum_probs=30.2
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEE
Q 013877 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVG 146 (434)
Q Consensus 105 ~~~~~g~kkIgIIG~G~mG~A~A~nLrds~~~~~~G~-~Vivg 146 (434)
.+.+++ .+|.|||+|-.|..+|++|... |+ ++.+.
T Consensus 322 q~kL~~-~kVLIVGaGGLGs~va~~La~a------GVG~ItLv 357 (598)
T 3vh1_A 322 LDIIKN-TKVLLLGAGTLGCYVSRALIAW------GVRKITFV 357 (598)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHTT------TCCEEEEE
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHHc------CCCEEEEE
Confidence 367888 9999999999999999999998 87 55555
Done!