Query 013879
Match_columns 434
No_of_seqs 189 out of 1413
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 08:18:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013879.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013879hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 2E-101 4E-106 781.7 34.8 374 45-431 26-408 (454)
2 PLN02209 serine carboxypeptida 100.0 2.1E-88 4.5E-93 692.7 38.3 363 45-431 21-395 (437)
3 PLN03016 sinapoylglucose-malat 100.0 1.6E-88 3.4E-93 693.5 37.1 360 45-430 19-390 (433)
4 PF00450 Peptidase_S10: Serine 100.0 1E-87 2.2E-92 689.7 29.1 362 53-430 1-375 (415)
5 PTZ00472 serine carboxypeptida 100.0 2.2E-83 4.8E-88 662.9 36.1 338 59-430 44-413 (462)
6 PLN02213 sinapoylglucose-malat 100.0 1.9E-61 4.2E-66 478.9 27.0 270 136-430 1-276 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 7.3E-59 1.6E-63 465.9 20.7 332 58-421 72-434 (498)
8 KOG1283 Serine carboxypeptidas 100.0 4.3E-59 9.4E-64 438.6 16.1 345 63-421 4-359 (414)
9 PRK00870 haloalkane dehalogena 98.5 1.6E-06 3.4E-11 85.2 13.5 140 46-231 8-149 (302)
10 TIGR03611 RutD pyrimidine util 98.4 6.7E-07 1.5E-11 84.0 8.8 116 78-234 2-117 (257)
11 TIGR01250 pro_imino_pep_2 prol 98.4 2.4E-06 5.3E-11 81.3 12.5 130 63-233 3-132 (288)
12 TIGR03056 bchO_mg_che_rel puta 98.4 2.9E-06 6.3E-11 81.2 11.2 109 87-234 24-132 (278)
13 PLN02824 hydrolase, alpha/beta 98.3 2.7E-06 5.9E-11 83.0 10.6 123 66-232 12-137 (294)
14 PHA02857 monoglyceride lipase; 98.3 3.7E-06 7.9E-11 81.2 10.8 125 73-234 9-134 (276)
15 TIGR01249 pro_imino_pep_1 prol 98.3 6.3E-06 1.4E-10 81.2 11.0 127 64-234 6-132 (306)
16 PRK10673 acyl-CoA esterase; Pr 98.2 5.8E-06 1.3E-10 78.4 9.2 104 86-230 11-114 (255)
17 PF12697 Abhydrolase_6: Alpha/ 98.1 7E-06 1.5E-10 74.7 8.1 104 94-235 1-104 (228)
18 PLN02298 hydrolase, alpha/beta 98.1 3.9E-05 8.5E-10 76.3 12.3 139 61-233 31-170 (330)
19 PRK03592 haloalkane dehalogena 98.0 3.4E-05 7.3E-10 75.3 11.0 115 74-234 16-130 (295)
20 PLN02385 hydrolase; alpha/beta 98.0 4.1E-05 8.9E-10 77.0 11.8 129 73-233 70-198 (349)
21 TIGR02240 PHA_depoly_arom poly 98.0 3.2E-05 7E-10 74.8 10.4 117 74-233 11-127 (276)
22 PRK03204 haloalkane dehalogena 98.0 5.3E-05 1.1E-09 74.0 11.4 123 62-232 14-136 (286)
23 PLN02652 hydrolase; alpha/beta 98.0 6.1E-05 1.3E-09 77.2 12.1 128 73-233 119-246 (395)
24 PRK11126 2-succinyl-6-hydroxy- 97.9 3E-05 6.4E-10 73.0 8.3 100 91-231 2-101 (242)
25 PRK06489 hypothetical protein; 97.9 8.8E-05 1.9E-09 74.9 12.0 140 60-231 39-188 (360)
26 PLN02578 hydrolase 97.9 9E-05 1.9E-09 74.7 11.9 112 74-231 75-186 (354)
27 PF10340 DUF2424: Protein of u 97.9 3.3E-05 7.1E-10 77.5 8.0 133 76-236 105-239 (374)
28 TIGR03695 menH_SHCHC 2-succiny 97.9 5.4E-05 1.2E-09 69.9 8.7 105 91-232 1-105 (251)
29 PLN03084 alpha/beta hydrolase 97.8 0.00011 2.5E-09 74.9 10.7 132 59-232 101-232 (383)
30 PLN02894 hydrolase, alpha/beta 97.8 0.0001 2.2E-09 75.8 10.3 109 89-232 103-211 (402)
31 TIGR02427 protocat_pcaD 3-oxoa 97.8 6.5E-05 1.4E-09 69.6 8.1 103 88-230 10-112 (251)
32 TIGR03343 biphenyl_bphD 2-hydr 97.8 0.00012 2.7E-09 70.4 10.0 107 90-231 29-135 (282)
33 PLN02211 methyl indole-3-aceta 97.8 0.00014 3E-09 70.7 10.3 106 89-231 16-121 (273)
34 KOG4409 Predicted hydrolase/ac 97.8 0.00011 2.4E-09 72.4 8.8 137 59-235 62-198 (365)
35 PRK10749 lysophospholipase L2; 97.8 0.00016 3.5E-09 72.1 10.5 126 74-233 40-167 (330)
36 PLN03087 BODYGUARD 1 domain co 97.7 0.00023 5.1E-09 74.5 11.1 132 61-230 175-307 (481)
37 PRK14875 acetoin dehydrogenase 97.7 0.00024 5.2E-09 71.4 10.6 113 75-231 119-231 (371)
38 PLN02679 hydrolase, alpha/beta 97.7 0.00025 5.5E-09 71.7 10.8 127 64-231 63-190 (360)
39 PLN02965 Probable pheophorbida 97.7 0.00016 3.4E-09 69.1 8.6 100 94-231 6-106 (255)
40 PRK05077 frsA fermentation/res 97.7 0.00037 7.9E-09 72.0 11.7 130 66-233 170-301 (414)
41 TIGR03101 hydr2_PEP hydrolase, 97.7 0.00059 1.3E-08 66.1 12.2 128 74-238 9-140 (266)
42 PRK10349 carboxylesterase BioH 97.6 0.00014 3.1E-09 69.2 7.8 95 92-231 14-108 (256)
43 TIGR01738 bioH putative pimelo 97.5 0.00025 5.5E-09 65.5 7.0 96 91-231 4-99 (245)
44 COG1506 DAP2 Dipeptidyl aminop 97.5 0.00021 4.5E-09 77.6 7.4 139 66-236 367-511 (620)
45 PRK08775 homoserine O-acetyltr 97.5 0.00057 1.2E-08 68.6 9.8 76 135-232 98-173 (343)
46 TIGR01840 esterase_phb esteras 97.3 0.00088 1.9E-08 62.4 8.5 117 88-231 10-129 (212)
47 PLN02980 2-oxoglutarate decarb 97.2 0.0025 5.4E-08 76.4 12.5 109 87-231 1367-1479(1655)
48 KOG2564 Predicted acetyltransf 97.2 0.00079 1.7E-08 64.4 6.4 108 89-229 72-179 (343)
49 PRK05855 short chain dehydroge 97.2 0.0016 3.5E-08 69.5 9.7 101 74-206 12-112 (582)
50 TIGR02821 fghA_ester_D S-formy 97.2 0.0057 1.2E-07 59.4 12.6 42 185-235 135-176 (275)
51 PRK10566 esterase; Provisional 97.1 0.0026 5.6E-08 60.3 9.7 111 78-208 14-127 (249)
52 COG2267 PldB Lysophospholipase 97.1 0.0033 7.1E-08 62.0 10.4 136 64-236 11-146 (298)
53 KOG1455 Lysophospholipase [Lip 97.0 0.0064 1.4E-07 59.0 11.2 114 73-208 36-149 (313)
54 PRK07581 hypothetical protein; 97.0 0.0033 7.1E-08 62.8 9.6 130 74-232 25-159 (339)
55 PLN02872 triacylglycerol lipas 97.0 0.0038 8.3E-08 64.0 9.5 125 60-203 42-175 (395)
56 COG0596 MhpC Predicted hydrola 96.9 0.006 1.3E-07 55.7 9.9 104 91-233 21-124 (282)
57 PLN02511 hydrolase 96.9 0.0037 8.1E-08 63.9 8.9 120 62-208 71-193 (388)
58 PRK10985 putative hydrolase; P 96.8 0.011 2.4E-07 58.8 11.5 137 64-234 33-170 (324)
59 PRK00175 metX homoserine O-ace 96.8 0.0094 2E-07 60.7 11.1 136 74-232 32-182 (379)
60 PLN02442 S-formylglutathione h 96.8 0.005 1.1E-07 60.2 8.3 57 167-235 125-181 (283)
61 PF00561 Abhydrolase_1: alpha/ 96.8 0.0019 4.1E-08 59.4 5.0 79 137-232 1-79 (230)
62 TIGR03100 hydr1_PEP hydrolase, 96.7 0.015 3.3E-07 56.4 10.9 79 137-234 58-136 (274)
63 TIGR01607 PST-A Plasmodium sub 96.7 0.016 3.4E-07 58.0 11.1 153 73-233 6-186 (332)
64 KOG4178 Soluble epoxide hydrol 96.6 0.024 5.2E-07 55.7 11.2 138 60-236 20-157 (322)
65 cd00707 Pancreat_lipase_like P 96.6 0.0036 7.8E-08 61.0 5.5 113 88-231 33-146 (275)
66 TIGR00976 /NonD putative hydro 96.3 0.013 2.9E-07 62.7 8.5 130 73-235 5-135 (550)
67 TIGR03230 lipo_lipase lipoprot 96.2 0.015 3.3E-07 60.2 7.9 81 136-231 73-153 (442)
68 KOG4391 Predicted alpha/beta h 96.2 0.086 1.9E-06 49.0 11.7 122 75-234 65-186 (300)
69 PLN00021 chlorophyllase 96.1 0.016 3.5E-07 57.5 7.7 115 88-233 49-167 (313)
70 PF00975 Thioesterase: Thioest 96.0 0.038 8.3E-07 51.4 9.2 102 93-231 2-103 (229)
71 TIGR01392 homoserO_Ac_trn homo 95.9 0.062 1.3E-06 54.0 10.7 135 74-232 15-162 (351)
72 KOG1515 Arylacetamide deacetyl 95.6 0.1 2.2E-06 52.2 10.9 144 64-235 63-210 (336)
73 COG3509 LpqC Poly(3-hydroxybut 95.6 0.14 3E-06 49.8 11.2 146 74-253 44-202 (312)
74 PRK10162 acetyl esterase; Prov 95.6 0.046 1E-06 54.3 8.1 62 169-234 136-197 (318)
75 PRK10115 protease 2; Provision 95.4 0.038 8.2E-07 60.8 7.3 144 65-237 417-564 (686)
76 PF12695 Abhydrolase_5: Alpha/ 95.3 0.039 8.4E-07 47.1 5.8 94 93-231 1-94 (145)
77 PF00326 Peptidase_S9: Prolyl 95.3 0.027 5.8E-07 52.1 5.0 94 135-239 13-106 (213)
78 KOG1454 Predicted hydrolase/ac 95.0 0.082 1.8E-06 52.8 7.9 97 89-212 56-152 (326)
79 PF06500 DUF1100: Alpha/beta h 94.8 0.084 1.8E-06 53.9 7.5 82 135-234 217-298 (411)
80 PF10230 DUF2305: Uncharacteri 94.7 0.19 4.1E-06 48.7 9.3 116 91-231 2-121 (266)
81 PF10503 Esterase_phd: Esteras 94.6 0.11 2.4E-06 48.9 7.1 39 184-231 93-131 (220)
82 PRK11460 putative hydrolase; P 94.5 0.21 4.4E-06 47.3 9.0 52 171-232 87-138 (232)
83 PF07519 Tannase: Tannase and 93.2 4.1 8.9E-05 42.9 16.6 82 171-265 102-192 (474)
84 KOG1838 Alpha/beta hydrolase [ 93.0 0.64 1.4E-05 47.4 9.6 132 64-231 95-235 (409)
85 KOG2100 Dipeptidyl aminopeptid 92.4 0.27 5.9E-06 54.7 6.7 145 62-235 498-647 (755)
86 cd00312 Esterase_lipase Estera 92.1 0.65 1.4E-05 48.8 8.9 37 169-206 158-194 (493)
87 PRK11071 esterase YqiA; Provis 92.0 0.16 3.5E-06 46.5 3.7 93 92-235 2-96 (190)
88 PF02230 Abhydrolase_2: Phosph 91.4 0.19 4.1E-06 46.7 3.5 58 167-235 86-143 (216)
89 PRK13604 luxD acyl transferase 89.9 2 4.4E-05 42.4 9.3 124 74-234 19-143 (307)
90 PF05990 DUF900: Alpha/beta hy 89.9 0.48 1E-05 44.9 4.8 67 167-236 75-141 (233)
91 PF01764 Lipase_3: Lipase (cla 89.4 0.81 1.8E-05 39.0 5.5 62 166-232 45-106 (140)
92 TIGR03502 lipase_Pla1_cef extr 89.3 1.6 3.5E-05 48.6 8.9 100 90-208 448-575 (792)
93 COG0400 Predicted esterase [Ge 89.2 1.4 3E-05 41.1 7.2 127 78-235 6-137 (207)
94 COG4099 Predicted peptidase [G 89.1 4.1 8.9E-05 39.9 10.4 113 72-211 169-292 (387)
95 PRK10252 entF enterobactin syn 89.0 2.5 5.5E-05 49.8 11.0 103 91-231 1068-1170(1296)
96 COG0657 Aes Esterase/lipase [L 88.5 2 4.4E-05 42.2 8.4 45 187-236 151-195 (312)
97 PLN02454 triacylglycerol lipas 88.1 1.4 3.1E-05 45.2 7.0 68 165-234 206-273 (414)
98 KOG3975 Uncharacterized conser 87.7 2.3 5.1E-05 40.5 7.6 103 88-214 26-132 (301)
99 cd00741 Lipase Lipase. Lipase 87.6 1.2 2.6E-05 38.9 5.5 59 166-231 9-67 (153)
100 PF07859 Abhydrolase_3: alpha/ 86.8 1.3 2.7E-05 40.6 5.5 45 185-234 68-112 (211)
101 KOG1552 Predicted alpha/beta h 86.8 4 8.8E-05 39.1 8.8 78 136-235 88-166 (258)
102 PLN02733 phosphatidylcholine-s 86.5 1.6 3.6E-05 45.4 6.6 41 165-208 142-182 (440)
103 PRK05371 x-prolyl-dipeptidyl a 86.1 1.2 2.7E-05 49.6 5.8 89 130-234 273-375 (767)
104 cd00519 Lipase_3 Lipase (class 86.0 1.9 4.1E-05 40.4 6.3 60 167-233 110-169 (229)
105 PRK06765 homoserine O-acetyltr 85.6 1.2 2.5E-05 45.7 4.9 57 159-231 138-195 (389)
106 PRK10439 enterobactin/ferric e 85.0 3.7 8E-05 42.4 8.3 36 188-232 288-323 (411)
107 PF05577 Peptidase_S28: Serine 83.8 3.2 7E-05 43.0 7.4 98 136-243 59-159 (434)
108 PF11144 DUF2920: Protein of u 83.6 2.3 5.1E-05 43.3 5.9 64 165-237 160-224 (403)
109 PF02129 Peptidase_S15: X-Pro 83.4 1.5 3.3E-05 42.2 4.5 83 137-236 58-140 (272)
110 smart00824 PKS_TE Thioesterase 83.3 6 0.00013 35.2 8.2 76 136-230 25-100 (212)
111 PF05728 UPF0227: Uncharacteri 83.0 2.3 4.9E-05 39.0 5.1 43 185-239 56-98 (187)
112 KOG2183 Prolylcarboxypeptidase 82.3 2.8 6E-05 42.8 5.8 62 136-201 111-180 (492)
113 PF05677 DUF818: Chlamydia CHL 82.2 3.4 7.5E-05 41.2 6.3 62 135-204 170-231 (365)
114 PF12146 Hydrolase_4: Putative 82.0 7.2 0.00016 30.3 7.0 78 75-176 2-79 (79)
115 PF07819 PGAP1: PGAP1-like pro 81.8 9.3 0.0002 36.0 9.0 122 90-235 3-127 (225)
116 PLN02571 triacylglycerol lipas 79.6 5.7 0.00012 40.9 7.1 69 165-234 204-277 (413)
117 PF06057 VirJ: Bacterial virul 79.5 3.2 7E-05 38.1 4.8 62 163-232 46-107 (192)
118 KOG3101 Esterase D [General fu 79.5 12 0.00026 35.0 8.3 68 185-262 138-205 (283)
119 COG3319 Thioesterase domains o 78.5 19 0.0004 34.8 9.9 77 138-233 28-104 (257)
120 PF11288 DUF3089: Protein of u 78.0 3.6 7.8E-05 38.3 4.7 44 166-211 75-118 (207)
121 PRK04940 hypothetical protein; 75.9 5.5 0.00012 36.2 5.2 38 188-237 60-97 (180)
122 PF08237 PE-PPE: PE-PPE domain 75.0 12 0.00026 35.4 7.4 86 138-231 4-89 (225)
123 KOG2182 Hydrolytic enzymes of 74.4 20 0.00044 37.5 9.4 69 137-206 119-190 (514)
124 TIGR01836 PHA_synth_III_C poly 73.1 7.2 0.00016 39.0 5.9 28 387-414 286-313 (350)
125 PF06342 DUF1057: Alpha/beta h 72.0 1E+02 0.0022 30.2 13.0 101 90-231 34-136 (297)
126 PF00151 Lipase: Lipase; Inte 71.2 1.2 2.7E-05 44.5 -0.2 71 135-211 103-173 (331)
127 PLN02753 triacylglycerol lipas 70.4 12 0.00027 39.5 6.8 72 163-234 285-361 (531)
128 KOG4627 Kynurenine formamidase 69.2 6.3 0.00014 36.7 3.9 72 147-233 102-173 (270)
129 PF05448 AXE1: Acetyl xylan es 68.9 28 0.0006 34.7 8.9 141 74-234 66-211 (320)
130 COG2272 PnbA Carboxylesterase 68.9 24 0.00053 37.0 8.5 33 172-205 165-197 (491)
131 PF00756 Esterase: Putative es 68.7 5.1 0.00011 37.7 3.4 56 167-235 98-153 (251)
132 PLN02719 triacylglycerol lipas 67.9 14 0.00031 39.0 6.7 70 165-234 273-347 (518)
133 PLN02934 triacylglycerol lipas 67.8 14 0.0003 39.0 6.6 41 169-212 305-345 (515)
134 PF10081 Abhydrolase_9: Alpha/ 67.1 14 0.0003 36.0 6.0 41 164-204 85-125 (289)
135 PLN00413 triacylglycerol lipas 65.7 6.9 0.00015 40.9 3.9 39 170-211 269-307 (479)
136 PLN02761 lipase class 3 family 63.3 19 0.00042 38.1 6.6 70 165-234 268-344 (527)
137 PLN02324 triacylglycerol lipas 62.5 24 0.00052 36.4 7.0 69 165-234 193-267 (415)
138 PLN02408 phospholipase A1 62.2 20 0.00042 36.4 6.3 64 166-233 179-242 (365)
139 PF05057 DUF676: Putative seri 62.1 13 0.00027 34.7 4.7 50 163-213 54-103 (217)
140 PRK14566 triosephosphate isome 62.0 22 0.00048 34.3 6.4 61 165-235 188-248 (260)
141 PLN02802 triacylglycerol lipas 62.0 17 0.00037 38.3 5.9 64 166-233 309-372 (509)
142 PLN02847 triacylglycerol lipas 61.9 15 0.00032 39.6 5.5 53 170-229 236-288 (633)
143 PF03283 PAE: Pectinacetyleste 60.9 71 0.0015 32.4 10.1 148 78-233 38-198 (361)
144 PRK14567 triosephosphate isome 60.2 27 0.00059 33.6 6.6 61 165-235 178-238 (253)
145 PLN02162 triacylglycerol lipas 60.0 11 0.00024 39.3 4.1 41 169-212 262-302 (475)
146 PF11187 DUF2974: Protein of u 59.2 14 0.0003 34.9 4.4 38 171-212 71-108 (224)
147 KOG3079 Uridylate kinase/adeny 55.5 6.5 0.00014 35.9 1.4 16 89-104 5-20 (195)
148 PF06259 Abhydrolase_8: Alpha/ 55.3 19 0.0004 32.7 4.4 65 135-208 62-129 (177)
149 COG0627 Predicted esterase [Ge 55.0 32 0.00069 34.3 6.3 90 133-235 95-190 (316)
150 PLN02310 triacylglycerol lipas 54.9 28 0.00061 35.8 6.0 64 166-233 186-250 (405)
151 TIGR01838 PHA_synth_I poly(R)- 54.2 66 0.0014 34.5 8.9 85 137-235 221-305 (532)
152 PF08840 BAAT_C: BAAT / Acyl-C 52.6 8.8 0.00019 35.7 1.9 46 176-231 10-55 (213)
153 COG0429 Predicted hydrolase of 52.4 2E+02 0.0044 28.9 11.3 130 64-231 51-185 (345)
154 COG3208 GrsT Predicted thioest 52.4 25 0.00055 33.5 4.9 80 137-234 34-113 (244)
155 KOG2984 Predicted hydrolase [G 51.3 20 0.00043 33.4 3.8 106 74-212 30-138 (277)
156 KOG2382 Predicted alpha/beta h 51.2 73 0.0016 31.6 8.0 89 85-199 46-134 (315)
157 PLN03082 Iron-sulfur cluster a 50.5 16 0.00035 32.6 3.2 63 89-152 76-144 (163)
158 COG2819 Predicted hydrolase of 50.4 1.2E+02 0.0026 29.3 9.2 55 168-231 113-171 (264)
159 COG2945 Predicted hydrolase of 50.3 21 0.00045 32.9 3.8 64 139-211 63-126 (210)
160 PF08386 Abhydrolase_4: TAP-li 48.4 18 0.00038 29.5 2.9 29 387-415 34-62 (103)
161 PF01083 Cutinase: Cutinase; 48.0 47 0.001 30.0 5.9 83 138-234 41-125 (179)
162 COG4757 Predicted alpha/beta h 48.0 42 0.00091 32.0 5.5 66 137-207 58-124 (281)
163 PLN03037 lipase class 3 family 45.6 46 0.00099 35.3 6.0 64 167-233 296-360 (525)
164 PLN02429 triosephosphate isome 45.6 55 0.0012 32.5 6.3 61 165-235 238-299 (315)
165 KOG1553 Predicted alpha/beta h 45.5 50 0.0011 33.3 5.8 71 140-229 272-342 (517)
166 KOG4569 Predicted lipase [Lipi 44.4 45 0.00097 33.5 5.6 57 171-232 157-213 (336)
167 KOG2541 Palmitoyl protein thio 44.1 53 0.0011 31.9 5.6 94 87-211 20-115 (296)
168 KOG3724 Negative regulator of 41.7 35 0.00076 37.9 4.5 93 93-202 91-196 (973)
169 PF00326 Peptidase_S9: Prolyl 41.6 18 0.0004 33.0 2.2 34 386-419 143-176 (213)
170 PLN02561 triosephosphate isome 41.4 64 0.0014 31.0 5.9 60 165-234 179-239 (253)
171 KOG1516 Carboxylesterase and r 40.5 1.8E+02 0.0038 30.9 9.8 34 172-206 180-213 (545)
172 PF12740 Chlorophyllase2: Chlo 40.3 69 0.0015 30.9 5.9 39 189-231 92-130 (259)
173 PF03403 PAF-AH_p_II: Platelet 39.8 16 0.00035 37.3 1.6 39 188-236 228-266 (379)
174 PF02450 LCAT: Lecithin:choles 39.8 24 0.00053 36.1 2.9 42 166-211 101-142 (389)
175 PF06821 Ser_hydrolase: Serine 39.7 25 0.00054 31.5 2.7 39 187-233 54-92 (171)
176 PRK07868 acyl-CoA synthetase; 39.1 1.1E+02 0.0024 35.4 8.5 22 187-208 140-161 (994)
177 PF00681 Plectin: Plectin repe 39.1 17 0.00038 24.8 1.2 33 229-261 11-43 (45)
178 PRK11190 Fe/S biogenesis prote 39.0 59 0.0013 29.9 5.1 64 92-156 24-95 (192)
179 COG3571 Predicted hydrolase of 38.9 34 0.00074 30.7 3.2 29 184-212 85-113 (213)
180 PF06414 Zeta_toxin: Zeta toxi 38.7 21 0.00046 32.6 2.1 35 88-123 11-51 (199)
181 cd00311 TIM Triosephosphate is 38.2 99 0.0021 29.5 6.6 59 166-235 176-235 (242)
182 PF08538 DUF1749: Protein of u 37.7 64 0.0014 31.9 5.3 71 163-237 82-153 (303)
183 COG3545 Predicted esterase of 37.7 35 0.00076 30.9 3.2 36 187-231 58-93 (181)
184 TIGR01911 HesB_rel_seleno HesB 36.9 39 0.00084 27.1 3.1 16 93-109 28-43 (92)
185 COG5510 Predicted small secret 36.8 37 0.00081 23.2 2.4 20 7-26 2-22 (44)
186 COG3596 Predicted GTPase [Gene 35.8 47 0.001 32.4 4.0 59 89-151 36-100 (296)
187 COG4782 Uncharacterized protei 35.3 56 0.0012 33.0 4.5 120 89-235 114-237 (377)
188 KOG2281 Dipeptidyl aminopeptid 34.5 54 0.0012 35.7 4.5 111 89-236 640-766 (867)
189 PF03583 LIP: Secretory lipase 33.2 1.3E+02 0.0027 29.4 6.7 67 165-235 45-116 (290)
190 PTZ00333 triosephosphate isome 32.4 1E+02 0.0023 29.6 5.8 60 165-234 182-242 (255)
191 PF05049 IIGP: Interferon-indu 32.4 21 0.00046 36.3 1.1 59 89-149 32-97 (376)
192 PF03096 Ndr: Ndr family; Int 32.3 59 0.0013 31.8 4.1 121 90-247 22-145 (283)
193 PRK00042 tpiA triosephosphate 32.2 1.4E+02 0.003 28.6 6.6 60 165-235 179-239 (250)
194 PLN02517 phosphatidylcholine-s 31.2 36 0.00078 36.8 2.6 22 187-208 212-233 (642)
195 PRK13604 luxD acyl transferase 31.0 56 0.0012 32.4 3.7 28 387-414 202-229 (307)
196 PRK14565 triosephosphate isome 30.4 1.2E+02 0.0027 28.8 5.8 54 165-236 173-226 (237)
197 PRK09504 sufA iron-sulfur clus 29.6 48 0.001 28.0 2.7 64 91-155 39-108 (122)
198 PF04414 tRNA_deacylase: D-ami 29.1 1.4E+02 0.0029 28.0 5.8 47 163-212 105-152 (213)
199 KOG2931 Differentiation-relate 28.9 1.7E+02 0.0037 28.9 6.5 122 90-247 45-168 (326)
200 PF09292 Neil1-DNA_bind: Endon 28.2 35 0.00076 22.5 1.2 11 92-102 25-35 (39)
201 PF10503 Esterase_phd: Esteras 28.2 54 0.0012 30.8 3.0 26 387-412 169-194 (220)
202 TIGR03341 YhgI_GntY IscR-regul 28.1 1.2E+02 0.0025 27.9 5.1 64 92-156 23-94 (190)
203 PF06309 Torsin: Torsin; Inte 27.8 49 0.0011 28.3 2.4 17 88-104 49-65 (127)
204 PRK10081 entericidin B membran 27.8 62 0.0014 22.7 2.4 21 6-26 1-22 (48)
205 COG3673 Uncharacterized conser 27.6 60 0.0013 32.4 3.2 69 136-210 65-144 (423)
206 cd00412 pyrophosphatase Inorga 27.4 2.2E+02 0.0047 25.2 6.5 45 164-212 108-152 (155)
207 PF14020 DUF4236: Protein of u 27.3 65 0.0014 23.3 2.6 15 138-153 40-54 (55)
208 COG0400 Predicted esterase [Ge 26.8 50 0.0011 30.7 2.5 41 386-426 145-185 (207)
209 PF07849 DUF1641: Protein of u 26.5 36 0.00077 23.1 1.1 18 332-349 14-31 (42)
210 PRK09502 iscA iron-sulfur clus 26.3 69 0.0015 26.3 3.0 63 92-155 25-93 (107)
211 PRK06762 hypothetical protein; 26.1 39 0.00084 29.6 1.5 21 92-113 2-24 (166)
212 PF12695 Abhydrolase_5: Alpha/ 25.9 58 0.0013 27.0 2.6 30 385-414 102-131 (145)
213 PF15613 WHIM2: WSTF, HB1, Itc 25.8 1.2E+02 0.0026 20.2 3.4 28 75-102 11-38 (38)
214 TIGR03598 GTPase_YsxC ribosome 25.7 2.2E+02 0.0047 25.0 6.5 60 88-151 14-77 (179)
215 PF05576 Peptidase_S37: PS-10 25.5 2.2E+02 0.0047 29.6 6.8 90 88-203 60-149 (448)
216 PLN02298 hydrolase, alpha/beta 25.2 70 0.0015 31.3 3.4 30 387-416 251-280 (330)
217 cd01853 Toc34_like Toc34-like 25.0 4.6E+02 0.0099 24.9 8.8 61 88-151 27-92 (249)
218 PF03583 LIP: Secretory lipase 24.9 61 0.0013 31.7 2.8 31 387-417 219-249 (290)
219 PF03032 Brevenin: Brevenin/es 24.1 50 0.0011 23.0 1.4 23 5-28 1-23 (46)
220 KOG4540 Putative lipase essent 24.0 37 0.0008 33.2 1.0 34 173-206 261-294 (425)
221 COG5153 CVT17 Putative lipase 24.0 37 0.0008 33.2 1.0 34 173-206 261-294 (425)
222 PRK13962 bifunctional phosphog 23.8 1.6E+02 0.0036 32.3 6.0 61 165-235 574-635 (645)
223 KOG4667 Predicted esterase [Li 23.7 1.7E+02 0.0036 27.8 5.2 102 139-254 65-166 (269)
224 KOG2369 Lecithin:cholesterol a 23.7 71 0.0015 33.4 3.1 45 167-211 160-205 (473)
225 COG4425 Predicted membrane pro 23.5 1.1E+02 0.0024 31.9 4.3 37 164-200 373-409 (588)
226 PRK14731 coaE dephospho-CoA ki 23.3 73 0.0016 29.3 2.9 32 90-122 3-36 (208)
227 PRK03995 hypothetical protein; 22.9 1.5E+02 0.0032 28.8 5.0 47 163-212 157-203 (267)
228 PF15253 STIL_N: SCL-interrupt 22.8 89 0.0019 32.2 3.6 36 61-99 199-235 (410)
229 PHA02857 monoglyceride lipase; 22.1 83 0.0018 29.7 3.1 29 386-414 208-236 (276)
230 PF07172 GRP: Glycine rich pro 21.0 86 0.0019 25.3 2.5 19 7-25 3-21 (95)
231 PF05277 DUF726: Protein of un 20.9 3.6E+02 0.0079 27.2 7.4 44 186-232 218-261 (345)
232 TIGR01840 esterase_phb esteras 20.8 82 0.0018 28.8 2.7 29 388-416 169-197 (212)
233 PF00121 TIM: Triosephosphate 20.6 52 0.0011 31.4 1.3 61 165-235 177-238 (244)
234 COG1075 LipA Predicted acetylt 20.3 1.3E+02 0.0028 30.0 4.2 45 163-210 105-149 (336)
235 PF13956 Ibs_toxin: Toxin Ibs, 20.1 46 0.00099 18.3 0.4 14 6-19 1-14 (19)
236 PF01583 APS_kinase: Adenylyls 20.1 58 0.0013 28.9 1.4 13 91-103 1-13 (156)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-101 Score=781.71 Aligned_cols=374 Identities=51% Similarity=0.930 Sum_probs=336.5
Q ss_pred CccccccCCCCCC-CCceeEEEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCC
Q 013879 45 NEDLVTNLPGQPN-VDFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDG 123 (434)
Q Consensus 45 ~~~~v~~l~g~~~-~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~ 123 (434)
..++|+.|||++. +++++|||||+|+++.+++||||||||+++|+++||||||||||||||+ .|+|.|+|||+|+.||
T Consensus 26 ~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl-~G~~~E~GPf~v~~~G 104 (454)
T KOG1282|consen 26 EADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSL-GGLFEENGPFRVKYNG 104 (454)
T ss_pred hhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccch-hhhhhhcCCeEEcCCC
Confidence 6788999999984 8899999999999888899999999999999999999999999999999 5999999999999999
Q ss_pred CccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccch
Q 013879 124 RGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIP 203 (434)
Q Consensus 124 ~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp 203 (434)
.+|..|+||||+.||||||||||||||||+++..++.+ +|+.+|+|++.||++||++||||++|+|||+||||||||||
T Consensus 105 ~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~-~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP 183 (454)
T KOG1282|consen 105 KTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKT-GDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVP 183 (454)
T ss_pred CcceeCCccccccccEEEEecCCcCCccccCCCCcCcC-CcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehH
Confidence 89999999999999999999999999999998877764 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCC-CceeeeeeeEecCCCCCchhhhhhHHHHHhhcccCCHHHHHHHHhhcccCCC---C-CCChHHHHH
Q 013879 204 ELTELIHDRNKDP-SLYIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILRTCDFNSS---D-PWSSDECSD 278 (434)
Q Consensus 204 ~~a~~i~~~n~~~-~~~inLkGi~IGNg~idp~~q~~s~~~~a~~~gli~~~~~~~~~~~c~~~~~---~-~~~~~~C~~ 278 (434)
+||++|++.|+.. ++.|||||++||||++|+..|..++.+|+++||+|++++++.+++.|..... . ......|..
T Consensus 184 ~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~~ 263 (454)
T KOG1282|consen 184 ALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCNK 263 (454)
T ss_pred HHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHHH
Confidence 9999999999864 6889999999999999999999999999999999999999999999987431 1 123679999
Q ss_pred HHHHHH-HhccCCCcccccccCCCCCchhhHHHHhhhccCCCccccCCCCCCchhHHHHhhCcHHHHhHccCCCcccccc
Q 013879 279 AVAEVL-KQYKEIDIYSIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLDNYAKAFYNRLDVQKALHVSDGHLLRN 357 (434)
Q Consensus 279 ~~~~~~-~~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~~~~~~ylN~~~Vr~aL~v~~~~~~~~ 357 (434)
+++.+. ...++++.|+|+.+.|...... . ...+....+++|.+...++|||+++||+||||+.+..+ +
T Consensus 264 ~~~~~~~~~~~~i~~y~i~~~~C~~~~~~-------~---~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~-~ 332 (454)
T KOG1282|consen 264 AVEEFDSKTTGDIDNYYILTPDCYPTSYE-------L---KKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIG-K 332 (454)
T ss_pred HHHHHHHHHhccCchhhhcchhhcccccc-------c---cccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCC-c
Confidence 999888 4557899999999989752110 0 00112356689998766999999999999999976433 7
Q ss_pred ceeccccccCCCCCCCCChHHHHHHHHHcC-CeEEEEecCCccccCcchHHHHHHhcCCCCCcccccceeC-Ceee
Q 013879 358 WSICNTTMYEGWPQPKPSVLPIYTKLIEAG-LRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQ-KQVS 431 (434)
Q Consensus 358 w~~cn~~V~~~~~d~~~~~~~~l~~LL~~~-irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~W~~~-~qva 431 (434)
|+.||+.|+..|.+...+|++.+..++.++ +|||||+||.|++||++|+++||++|+++..++||||+++ +|||
T Consensus 333 W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qva 408 (454)
T KOG1282|consen 333 WERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVA 408 (454)
T ss_pred ccccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCcee
Confidence 999999999889999999999999999865 9999999999999999999999999999999999999996 7886
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=2.1e-88 Score=692.72 Aligned_cols=363 Identities=32% Similarity=0.572 Sum_probs=306.5
Q ss_pred CccccccCCCCC-CCCceeEEEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCC
Q 013879 45 NEDLVTNLPGQP-NVDFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDG 123 (434)
Q Consensus 45 ~~~~v~~l~g~~-~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~ 123 (434)
..++|++|||++ +++++++|||++|+++.+++||||||||+++|+++|++|||||||||||+ +|+|.|+|||+++.++
T Consensus 21 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~~ 99 (437)
T PLN02209 21 SGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALKNKV 99 (437)
T ss_pred ccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceeccCC
Confidence 567899999995 58899999999998777899999999999999999999999999999999 8999999999998763
Q ss_pred -----CccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccC
Q 013879 124 -----RGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYA 198 (434)
Q Consensus 124 -----~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYg 198 (434)
.++++|++||++.|||||||||+||||||+....... +++++|+++++||+.||++||+|+++|+||+|||||
T Consensus 100 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 177 (437)
T PLN02209 100 YNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYS 177 (437)
T ss_pred CCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcC
Confidence 4789999999999999999999999999987654443 556778999999999999999999999999999999
Q ss_pred cccchHHHHHHHhhcCCC-CceeeeeeeEecCCCCCchhhhhhHHHHHhhcccCCHHHHHHHHhhcccCC-CCCCChHHH
Q 013879 199 GRYIPELTELIHDRNKDP-SLYIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILRTCDFNS-SDPWSSDEC 276 (434)
Q Consensus 199 G~yvp~~a~~i~~~n~~~-~~~inLkGi~IGNg~idp~~q~~s~~~~a~~~gli~~~~~~~~~~~c~~~~-~~~~~~~~C 276 (434)
|||||.+|++|+++|++. +.+||||||+|||||+||..|..++.+|++.||+|++++++.+++.|.... .....+..|
T Consensus 178 G~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~C 257 (437)
T PLN02209 178 GMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKKC 257 (437)
T ss_pred ceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHHH
Confidence 999999999999988644 578999999999999999999999999999999999999999999996421 011235789
Q ss_pred HHHHHHHHHhccCCCcccccccCCCCCchhhHHHHhhhccCCCccccCCCCCCch---hHHHHhhCcHHHHhHccCCCcc
Q 013879 277 SDAVAEVLKQYKEIDIYSIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLD---NYAKAFYNRLDVQKALHVSDGH 353 (434)
Q Consensus 277 ~~~~~~~~~~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~---~~~~~ylN~~~Vr~aL~v~~~~ 353 (434)
.+++.+.......+|.|++....|...... ....+|.. ..+..|||+++||+||||+...
T Consensus 258 ~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~-----------------~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~ 320 (437)
T PLN02209 258 LKLVEEYHKCTDNINSHHTLIANCDDSNTQ-----------------HISPDCYYYPYHLVECWANNESVREALHVDKGS 320 (437)
T ss_pred HHHHHHHHHHhhcCCccccccccccccccc-----------------cCCCCcccccHHHHHHHhCCHHHHHHhCCCCCC
Confidence 998887666666788887655567542110 11235643 4688999999999999998532
Q ss_pred ccccceeccccccCCCC-CCCCChHHHHHHHHHcCCeEEEEecCCccccCcchHHHHHHhcCCCCCcccccceeCCeee
Q 013879 354 LLRNWSICNTTMYEGWP-QPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVS 431 (434)
Q Consensus 354 ~~~~w~~cn~~V~~~~~-d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~W~~~~qva 431 (434)
...|..|+..+ .+. |.+ ++++.+.++|.+|+|||||+||.|++||+.|+++|+++|+|+++++|++|++++|+|
T Consensus 321 -~~~w~~~~~~~--~~~~d~~-~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~a 395 (437)
T PLN02209 321 -IGEWIRDHRGI--PYKSDIR-SSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIA 395 (437)
T ss_pred -CCCCccccchh--hcccchh-hhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEee
Confidence 23699998765 344 444 455555566667999999999999999999999999999999999999999988763
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=1.6e-88 Score=693.51 Aligned_cols=360 Identities=33% Similarity=0.602 Sum_probs=307.4
Q ss_pred CccccccCCCCC-CCCceeEEEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCC-
Q 013879 45 NEDLVTNLPGQP-NVDFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTD- 122 (434)
Q Consensus 45 ~~~~v~~l~g~~-~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~- 122 (434)
..+.|++|||+. +++++++|||++|+++.+.+||||||||+++|+++|+||||||||||||+ .|+|.|+|||+++.+
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccc
Confidence 346799999984 57899999999998767789999999999999999999999999999999 799999999998643
Q ss_pred ----CCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccC
Q 013879 123 ----GRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYA 198 (434)
Q Consensus 123 ----~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYg 198 (434)
+.++.+|++||++.|||||||||+||||||+....... +++++|++++.||+.||++||+|+++|+||+|||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 35789999999999999999999999999987655432 566777999999999999999999999999999999
Q ss_pred cccchHHHHHHHhhcCCC-CceeeeeeeEecCCCCCchhhhhhHHHHHhhcccCCHHHHHHHHhhcccCCCC-CCChHHH
Q 013879 199 GRYIPELTELIHDRNKDP-SLYIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILRTCDFNSSD-PWSSDEC 276 (434)
Q Consensus 199 G~yvp~~a~~i~~~n~~~-~~~inLkGi~IGNg~idp~~q~~s~~~~a~~~gli~~~~~~~~~~~c~~~~~~-~~~~~~C 276 (434)
|||||.+|++|+++|++. ..+||||||+||||++||..|..++.+|+|.||||++++++.+++.|...... ......|
T Consensus 176 G~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C 255 (433)
T PLN03016 176 GMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQC 255 (433)
T ss_pred ceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHH
Confidence 999999999999998754 57899999999999999999999999999999999999999999999742110 1246789
Q ss_pred HHHHHHHHHhccCCCcccccccCCCCCchhhHHHHhhhccCCCccccCCCCCCch---hHHHHhhCcHHHHhHccCCCcc
Q 013879 277 SDAVAEVLKQYKEIDIYSIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLD---NYAKAFYNRLDVQKALHVSDGH 353 (434)
Q Consensus 277 ~~~~~~~~~~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~---~~~~~ylN~~~Vr~aL~v~~~~ 353 (434)
..++..+....+++|+|||+.+.|..... ..++|.. ..+.+|||+++||+||||+...
T Consensus 256 ~~~~~~~~~~~~~~n~yni~~~~~~~~~~-------------------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~ 316 (433)
T PLN03016 256 LKLTEEYHKCTAKINIHHILTPDCDVTNV-------------------TSPDCYYYPYHLIECWANDESVREALHIEKGS 316 (433)
T ss_pred HHHHHHHHHHhcCCChhhccCCccccccc-------------------CCCcccccchHHHHHHhCCHHHHHHhCCCCCC
Confidence 99888777777889999999766632100 0134653 4678999999999999998521
Q ss_pred ccccceeccccccCCCC-CCCCChHHHHHHHHHcCCeEEEEecCCccccCcchHHHHHHhcCCCCCcccccceeCCee
Q 013879 354 LLRNWSICNTTMYEGWP-QPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQV 430 (434)
Q Consensus 354 ~~~~w~~cn~~V~~~~~-d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~W~~~~qv 430 (434)
..+|..||..|. +. |.+ ++++.+.+++.+|+|||||+||.|++||+.|+++|+++|+|++.++|+||++++|+
T Consensus 317 -~~~w~~cn~~v~--~~~d~~-~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~ 390 (433)
T PLN03016 317 -KGKWARCNRTIP--YNHDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQI 390 (433)
T ss_pred -CCCCccCCcccc--cccccc-hhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEe
Confidence 237999999986 44 444 45555566666799999999999999999999999999999999999999988766
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1e-87 Score=689.71 Aligned_cols=362 Identities=38% Similarity=0.727 Sum_probs=289.4
Q ss_pred CCCC-CCCceeEEEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCC-CccccCC
Q 013879 53 PGQP-NVDFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDG-RGLQFNP 130 (434)
Q Consensus 53 ~g~~-~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~-~~l~~n~ 130 (434)
||+. ++++++|||||+|+++.+.+||||||||+++|+++||||||||||||||+ +|+|.|+|||+++.++ .++++|+
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 5554 36789999999999777899999999999999999999999999999999 8999999999999553 6899999
Q ss_pred CCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHH
Q 013879 131 YAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIH 210 (434)
Q Consensus 131 ~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~ 210 (434)
+||++++|||||||||||||||+.....+.. +++++|+++++||+.||++||+|+++|+||+||||||||||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVW-NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccc-hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 9999999999999999999999987765444 899999999999999999999999999999999999999999999999
Q ss_pred hhcCCC-CceeeeeeeEecCCCCCchhhhhhHHHHHhhcccCCHHHHHHHHhhcccCCCCCCChHHHHHHHHHHHH----
Q 013879 211 DRNKDP-SLYIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILRTCDFNSSDPWSSDECSDAVAEVLK---- 285 (434)
Q Consensus 211 ~~n~~~-~~~inLkGi~IGNg~idp~~q~~s~~~~a~~~gli~~~~~~~~~~~c~~~~~~~~~~~~C~~~~~~~~~---- 285 (434)
++|+.+ .++||||||+|||||+||..|..++.+|++.||+|++++++.+.+.|............|.++.+.+..
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 238 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAI 238 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhccc
Confidence 999865 578999999999999999999999999999999999999999999886431111356889988877665
Q ss_pred --hccCCCcccccccCCCCCchhhHHHHhhhccCCCccccCCCCCCchhHHHHhhCcHHHHhHccCCCccccccceeccc
Q 013879 286 --QYKEIDIYSIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLDNYAKAFYNRLDVQKALHVSDGHLLRNWSICNT 363 (434)
Q Consensus 286 --~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~cn~ 363 (434)
..+++|+|||+.++|...... .......+++....+..|||+++||+||||+.. ...+|+.||+
T Consensus 239 ~~~~~~~n~Ydi~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~-~~~~w~~~~~ 304 (415)
T PF00450_consen 239 SQCNGGINPYDIRQPCYNPSRSS-------------YDNSPSNDPPDDDYLEAYLNRPDVREALHVPVD-SNVNWQSCND 304 (415)
T ss_dssp HHHHTTSETTSTTSEETT-SHCT-------------TCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STT-TSSS--SB-H
T ss_pred ccccCCcceeeeecccccccccc-------------ccccccccccchhhHHHHhccHHHHHhhCCCcc-cCCcccccCc
Confidence 347999999997644311000 000111233344788999999999999999731 1348999999
Q ss_pred cc-cCC-CCCCCCChHHHHHHHHHcCCeEEEEecCCccccCcchHHHHHHhcCCCCCccccccee--CCee
Q 013879 364 TM-YEG-WPQPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYH--QKQV 430 (434)
Q Consensus 364 ~V-~~~-~~d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~W~~--~~qv 430 (434)
.| +.. ..+.+.++.+.+++||++++|||||+||.|++||+.|+++|+++|+|+++++|++|.. +++|
T Consensus 305 ~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~ 375 (415)
T PF00450_consen 305 AVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQV 375 (415)
T ss_dssp HHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSE
T ss_pred ccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccc
Confidence 98 333 3478899999999999999999999999999999999999999999999999999987 5555
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=2.2e-83 Score=662.85 Aligned_cols=338 Identities=29% Similarity=0.550 Sum_probs=292.8
Q ss_pred CceeEEEEEEeec-CCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCc
Q 013879 59 DFRHYAGYVTVNE-HNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEA 137 (434)
Q Consensus 59 ~~~~~sGy~~v~~-~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~ 137 (434)
++++|||||+|++ ..+++||||||||+++|+++||+|||||||||||+ +|+|.|+|||+|+.++.++.+|++||++.+
T Consensus 44 ~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~ 122 (462)
T PTZ00472 44 SVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNNEA 122 (462)
T ss_pred CCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCccccccc
Confidence 5789999999975 44689999999999999999999999999999999 899999999999998778999999999999
Q ss_pred ceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCC-
Q 013879 138 NMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDP- 216 (434)
Q Consensus 138 n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~- 216 (434)
||||||||+||||||+... ++.. +++++|+++++||+.||++||+++++|+||+||||||+|+|.+|.+|+++|+.+
T Consensus 123 ~~l~iDqP~G~G~S~~~~~-~~~~-~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~ 200 (462)
T PTZ00472 123 YVIYVDQPAGVGFSYADKA-DYDH-NESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGD 200 (462)
T ss_pred CeEEEeCCCCcCcccCCCC-CCCC-ChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccC
Confidence 9999999999999998654 3433 789999999999999999999999999999999999999999999999999765
Q ss_pred CceeeeeeeEecCCCCCchhhhhhHHHHHhh-------cccCCHHHHHHHHh---hc-------ccCCCCCCChHHHHHH
Q 013879 217 SLYIDLKGILLGNPETSTAEDWQGLVDYAWS-------HAVVSDETHKIILR---TC-------DFNSSDPWSSDECSDA 279 (434)
Q Consensus 217 ~~~inLkGi~IGNg~idp~~q~~s~~~~a~~-------~gli~~~~~~~~~~---~c-------~~~~~~~~~~~~C~~~ 279 (434)
..+||||||+|||||+||..|+.++.+|+|. +|+|++++++++.+ .| ..... .....|..+
T Consensus 201 ~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~--~~~~~c~~a 278 (462)
T PTZ00472 201 GLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPD--DADSSCSVA 278 (462)
T ss_pred CceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCC--CcchHHHHH
Confidence 5789999999999999999999999999996 58999999988865 34 22110 123456554
Q ss_pred HHHHHH-----hccCCCcccccccCCCCCchhhHHHHhhhccCCCccccCCCCCCch-hHHHHhhCcHHHHhHccCCCcc
Q 013879 280 VAEVLK-----QYKEIDIYSIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLD-NYAKAFYNRLDVQKALHVSDGH 353 (434)
Q Consensus 280 ~~~~~~-----~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~-~~~~~ylN~~~Vr~aL~v~~~~ 353 (434)
...|.. ..+++|+||||.+ |.. ++|.+ ..+.+|||+++||+||||+.
T Consensus 279 ~~~c~~~~~~~~~~g~n~Ydi~~~-c~~------------------------~~c~~~~~~~~yLN~~~Vq~AL~v~~-- 331 (462)
T PTZ00472 279 RALCNEYIAVYSATGLNNYDIRKP-CIG------------------------PLCYNMDNTIAFMNREDVQSSLGVKP-- 331 (462)
T ss_pred HHHHHHHHHHHHhcCCChhheecc-CCC------------------------CCccCHHHHHHHhCCHHHHHHhCCCC--
Confidence 433322 1368999999964 732 35764 57899999999999999984
Q ss_pred ccccceeccccccCCCC-CCCCChHHHHHHHHHcCCeEEEEecCCccccCcchHHHHHHhcCCCCCc-----ccccc-ee
Q 013879 354 LLRNWSICNTTMYEGWP-QPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITK-----SWRPW-YH 426 (434)
Q Consensus 354 ~~~~w~~cn~~V~~~~~-d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~-----~~~~W-~~ 426 (434)
.+|+.||..|+.++. |.+.++.+.+++||++|+|||||+||.|++||+.|+++|+++|+|++++ +|++| ++
T Consensus 332 --~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~ 409 (462)
T PTZ00472 332 --ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAV 409 (462)
T ss_pred --CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEec
Confidence 379999999988877 7888899999999999999999999999999999999999999999975 56999 45
Q ss_pred CCee
Q 013879 427 QKQV 430 (434)
Q Consensus 427 ~~qv 430 (434)
++++
T Consensus 410 ~~~v 413 (462)
T PTZ00472 410 DGRW 413 (462)
T ss_pred CCEe
Confidence 6665
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.9e-61 Score=478.86 Aligned_cols=270 Identities=33% Similarity=0.548 Sum_probs=224.6
Q ss_pred CcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCC
Q 013879 136 EANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD 215 (434)
Q Consensus 136 ~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~ 215 (434)
+|||||||||+||||||+.+..++. +++++|++++.||+.||++||+|+++||||+||||||||||.+|++|+++|+.
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~--~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 4899999999999999987654443 56677799999999999999999999999999999999999999999998875
Q ss_pred C-CceeeeeeeEecCCCCCchhhhhhHHHHHhhcccCCHHHHHHHHhhcccCCCC-CCChHHHHHHHHHHHHhccCCCcc
Q 013879 216 P-SLYIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILRTCDFNSSD-PWSSDECSDAVAEVLKQYKEIDIY 293 (434)
Q Consensus 216 ~-~~~inLkGi~IGNg~idp~~q~~s~~~~a~~~gli~~~~~~~~~~~c~~~~~~-~~~~~~C~~~~~~~~~~~~~in~Y 293 (434)
. ..+||||||+||||||||..|..++.+|+|.||+|++++++.+++.|...... ......|.+++..+....+++|+|
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 158 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIH 158 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHh
Confidence 4 57899999999999999999999999999999999999999999999632110 123568999888777667889999
Q ss_pred cccccCCCCCchhhHHHHhhhccCCCccccCCCCCCch---hHHHHhhCcHHHHhHccCCCccccccceeccccccCCCC
Q 013879 294 SIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLD---NYAKAFYNRLDVQKALHVSDGHLLRNWSICNTTMYEGWP 370 (434)
Q Consensus 294 di~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~---~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~cn~~V~~~~~ 370 (434)
|++.+.|.... . ..+.|.. ..+.+|||+++||+||||+... ..+|+.||..|. +.
T Consensus 159 ~~~~~~~~~~~-----------------~--~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~~v~--~~ 216 (319)
T PLN02213 159 HILTPDCDVTN-----------------V--TSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRTIP--YN 216 (319)
T ss_pred hcccCcccCcc-----------------C--CCCCcccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCcccc--cc
Confidence 99866564210 0 0135652 4689999999999999997421 237999999986 44
Q ss_pred -CCCCChHHHHHHHHHcCCeEEEEecCCccccCcchHHHHHHhcCCCCCcccccceeCCee
Q 013879 371 -QPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQV 430 (434)
Q Consensus 371 -d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~W~~~~qv 430 (434)
|.. +.++.+.++|.+|+|||||+||.|++|||.|+++|+++|+|++.++|+||++++|+
T Consensus 217 ~d~~-~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~ 276 (319)
T PLN02213 217 HDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQI 276 (319)
T ss_pred cccc-cchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEe
Confidence 443 45555556666799999999999999999999999999999999999999988765
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-59 Score=465.85 Aligned_cols=332 Identities=26% Similarity=0.442 Sum_probs=269.4
Q ss_pred CCceeEEEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCC-CCccccCCCCcccC
Q 013879 58 VDFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTD-GRGLQFNPYAWNKE 136 (434)
Q Consensus 58 ~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~-~~~l~~n~~sW~~~ 136 (434)
+++++++||.... -.+|||+||++++|+++|+|+||||||||||+ +|+|.|+||++|+.+ ++.--.||+||+.+
T Consensus 72 lpv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~ 146 (498)
T COG2939 72 LPVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDF 146 (498)
T ss_pred cchhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccC
Confidence 3456677773332 23999999999999999999999999999999 899999999999988 43222599999999
Q ss_pred cceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCC--cEEEEeeccCcccchHHHHHHHhhcC
Q 013879 137 ANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRR--TFYIAGESYAGRYIPELTELIHDRNK 214 (434)
Q Consensus 137 ~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~--~~~i~GESYgG~yvp~~a~~i~~~n~ 214 (434)
+||||||||+||||||+... +... +.+.+.+|+..|++.||+.||+|.+. |+||+||||||+|+|.||.+|+++|.
T Consensus 147 adLvFiDqPvGTGfS~a~~~-e~~~-d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~ 224 (498)
T COG2939 147 ADLVFIDQPVGTGFSRALGD-EKKK-DFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNI 224 (498)
T ss_pred CceEEEecCcccCccccccc-cccc-chhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhcc
Confidence 99999999999999997332 2333 77889999999999999999999877 99999999999999999999999974
Q ss_pred CCCceeeeeeeEecCC-CCCchhhhhhHHHHHhhc----ccCCHHHHHHHHhhcccC-----CCC---CCChHHHHHHHH
Q 013879 215 DPSLYIDLKGILLGNP-ETSTAEDWQGLVDYAWSH----AVVSDETHKIILRTCDFN-----SSD---PWSSDECSDAVA 281 (434)
Q Consensus 215 ~~~~~inLkGi~IGNg-~idp~~q~~s~~~~a~~~----gli~~~~~~~~~~~c~~~-----~~~---~~~~~~C~~~~~ 281 (434)
..+-.+||++++|||| +|||..|+.+|..+|... +.++.+.++++.+.|+.. .++ ......|..+..
T Consensus 225 ~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~ 304 (498)
T COG2939 225 ALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASA 304 (498)
T ss_pred ccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHH
Confidence 4367899999999999 999999999999999854 466778888888877642 122 123457877766
Q ss_pred HHHHhc------cC---CCcccccccCCCCCchhhHHHHhhhccCCCccccCCCCCCch--hHHHHhhCcHHHHhHccCC
Q 013879 282 EVLKQY------KE---IDIYSIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLD--NYAKAFYNRLDVQKALHVS 350 (434)
Q Consensus 282 ~~~~~~------~~---in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~--~~~~~ylN~~~Vr~aL~v~ 350 (434)
.+.... .+ +|.||++. .|..... ...|++ ....+|++.+.++++++..
T Consensus 305 ~~~~~~~~~~~r~~~~~~n~y~~r~-~~~d~g~--------------------~~~~y~~~~~~ld~~~~~~~~~~~~~~ 363 (498)
T COG2939 305 YLTGLMREYVGRAGGRLLNVYDIRE-ECRDPGL--------------------GGSCYDTLSTSLDYFNFDPEQEVNDPE 363 (498)
T ss_pred HHHhcchhhhccccccccccccchh-hcCCCCc--------------------ccccccceeeccccccccchhcccccc
Confidence 554322 24 88999986 3643110 024554 4677899988899988876
Q ss_pred CccccccceeccccccCCCC----CCCCChHHHHHHHHHcCCeEEEEecCCccccCcchHHHHHHhcCCCCCccc
Q 013879 351 DGHLLRNWSICNTTMYEGWP----QPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSW 421 (434)
Q Consensus 351 ~~~~~~~w~~cn~~V~~~~~----d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~ 421 (434)
. ..|..|+.++...|. +.+++....+..++.+++.+++|.||.|.+||+.|+++|..+|+|-+...|
T Consensus 364 ~----d~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~ 434 (498)
T COG2939 364 V----DNISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGY 434 (498)
T ss_pred c----cchhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecch
Confidence 4 379999999987772 566778888999999999999999999999999999999999999988744
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-59 Score=438.57 Aligned_cols=345 Identities=23% Similarity=0.391 Sum_probs=280.7
Q ss_pred EEEEEEeecCCCeeEEEEEEEecCC-CCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeE
Q 013879 63 YAGYVTVNEHNGRALFYWFYEAMTR-PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLF 141 (434)
Q Consensus 63 ~sGy~~v~~~~~~~lfy~f~es~~~-~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~ 141 (434)
-.||+++.. +.++|+|++.+..+ ...+|+.|||+||||+||.++|+|.|+||...+ +++|+.+|.+.|+|||
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adllf 76 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLLF 76 (414)
T ss_pred cccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEEE
Confidence 469999974 59999999988754 478999999999999999999999999999876 5669999999999999
Q ss_pred eeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceee
Q 013879 142 LESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYID 221 (434)
Q Consensus 142 iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~in 221 (434)
||.|||+||||.+....|.+ +.+++|.|+.+.|+.||..||||+..|+||+-|||||+.++.+|..+....+.++++.|
T Consensus 77 vDnPVGaGfSyVdg~~~Y~~-~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~n 155 (414)
T KOG1283|consen 77 VDNPVGAGFSYVDGSSAYTT-NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLN 155 (414)
T ss_pred ecCCCcCceeeecCcccccc-cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeec
Confidence 99999999999998877776 99999999999999999999999999999999999999999999999999998889999
Q ss_pred eeeeEecCCCCCchhhhhhHHHHHhhcccCCHHHHHHHHh---hcccC-CCC--CCChHHHHHHHHHHHHhccCCCcccc
Q 013879 222 LKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILR---TCDFN-SSD--PWSSDECSDAVAEVLKQYKEIDIYSI 295 (434)
Q Consensus 222 LkGi~IGNg~idp~~q~~s~~~~a~~~gli~~~~~~~~~~---~c~~~-~~~--~~~~~~C~~~~~~~~~~~~~in~Ydi 295 (434)
+.||++|+.||+|..-..++.+|++..+++|+...+...+ .|.-. ..+ ..++..+....+-+..++.++|.|||
T Consensus 156 f~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYNi 235 (414)
T KOG1283|consen 156 FIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYNI 235 (414)
T ss_pred ceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceeee
Confidence 9999999999999999999999999999999988877654 34321 111 12222233333445556678999999
Q ss_pred cccCCCCCchhhHHHHhhhc-cCCC-ccccC-CCCCCchhHHHHhhCcHHHHhHccCCCccccccceeccccccCCCC-C
Q 013879 296 YTSVCSSNSLESSQLLMKRT-SKMM-PRIMG-GYDPCLDNYAKAFYNRLDVQKALHVSDGHLLRNWSICNTTMYEGWP-Q 371 (434)
Q Consensus 296 ~~~~C~~~~~~~~~~~~~~~-~~~~-~~~~~-~~~pc~~~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~cn~~V~~~~~-d 371 (434)
.++.-....+.. +++.. .+.. ++... ...+-..+.+.+++|-+ ||++|+|.+.+ .+|...+.+|+-+.+ |
T Consensus 236 l~~t~~d~~~~s---s~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~--~~wGgqsg~vFt~lq~d 309 (414)
T KOG1283|consen 236 LTKTLGDQYSLS---SRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGG--VKWGGQSGDVFTKLQGD 309 (414)
T ss_pred eccCCCcchhhh---hhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCC--CcccCcCCchHHHhhhh
Confidence 976332221111 11110 0000 01100 11111125689999987 99999998753 589999999988777 9
Q ss_pred CCCChHHHHHHHHHcCCeEEEEecCCccccCcchHHHHHHhcCCCCCccc
Q 013879 372 PKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSW 421 (434)
Q Consensus 372 ~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~ 421 (434)
+|+|++..+.+||++|++|.||||+.|.||++.|+++|+..|.|+....+
T Consensus 310 FMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f 359 (414)
T KOG1283|consen 310 FMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSF 359 (414)
T ss_pred hcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCcc
Confidence 99999999999999999999999999999999999999999999998754
No 9
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.51 E-value=1.6e-06 Score=85.19 Aligned_cols=140 Identities=19% Similarity=0.217 Sum_probs=91.7
Q ss_pred ccccccCCCCCCCCceeEEEEEEeecCCCe--eEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCC
Q 013879 46 EDLVTNLPGQPNVDFRHYAGYVTVNEHNGR--ALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDG 123 (434)
Q Consensus 46 ~~~v~~l~g~~~~~~~~~sGy~~v~~~~~~--~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~ 123 (434)
+.+++++|.+ +..-.|++++...|. +++|.- ..++ +.|.||.++|.|+.+.. +..+.+
T Consensus 8 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~y~~---~G~~-~~~~lvliHG~~~~~~~-w~~~~~---------- 67 (302)
T PRK00870 8 DSRFENLPDY-----PFAPHYVDVDDGDGGPLRMHYVD---EGPA-DGPPVLLLHGEPSWSYL-YRKMIP---------- 67 (302)
T ss_pred cccccCCcCC-----CCCceeEeecCCCCceEEEEEEe---cCCC-CCCEEEEECCCCCchhh-HHHHHH----------
Confidence 4556788854 345678888763343 577662 2233 46889999999887777 654431
Q ss_pred CccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccch
Q 013879 124 RGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIP 203 (434)
Q Consensus 124 ~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp 203 (434)
.|.. +..+++.+|.| |.|.|-..... ...+.+..++++.++|+. +...+++|+|||+||..+-
T Consensus 68 -~L~~------~gy~vi~~Dl~-G~G~S~~~~~~--~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~ 130 (302)
T PRK00870 68 -ILAA------AGHRVIAPDLI-GFGRSDKPTRR--EDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIGL 130 (302)
T ss_pred -HHHh------CCCEEEEECCC-CCCCCCCCCCc--ccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHHH
Confidence 1221 24699999988 99998322111 112566677777666653 2345899999999999988
Q ss_pred HHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 204 ELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 204 ~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
.+|.+-.+. ++++++.++.
T Consensus 131 ~~a~~~p~~---------v~~lvl~~~~ 149 (302)
T PRK00870 131 RLAAEHPDR---------FARLVVANTG 149 (302)
T ss_pred HHHHhChhh---------eeEEEEeCCC
Confidence 888654332 8888887764
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.45 E-value=6.7e-07 Score=83.96 Aligned_cols=116 Identities=18% Similarity=0.225 Sum_probs=79.7
Q ss_pred EEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCC
Q 013879 78 FYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTN 157 (434)
Q Consensus 78 fy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~ 157 (434)
+|..+.. ..++.|+||+++|.+|.+.. +..+.+ .+ .+..+++.+|.| |.|.|-.....
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D~~-G~G~S~~~~~~ 59 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSY-WAPQLD-----------VL-------TQRFHVVTYDHR-GTGRSPGELPP 59 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhH-HHHHHH-----------HH-------HhccEEEEEcCC-CCCCCCCCCcc
Confidence 4555432 23467999999999887766 544331 11 234699999999 99999543222
Q ss_pred CCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCc
Q 013879 158 DYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (434)
Q Consensus 158 ~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp 234 (434)
. .+.++.++++.+++.. +...+++++|+|+||..+..+|.+..+. ++++++.+|+..+
T Consensus 60 ~---~~~~~~~~~~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~~---------v~~~i~~~~~~~~ 117 (257)
T TIGR03611 60 G---YSIAHMADDVLQLLDA-------LNIERFHFVGHALGGLIGLQLALRYPER---------LLSLVLINAWSRP 117 (257)
T ss_pred c---CCHHHHHHHHHHHHHH-------hCCCcEEEEEechhHHHHHHHHHHChHH---------hHHheeecCCCCC
Confidence 2 2567777777777653 2235799999999999999888754432 7888888887654
No 11
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.44 E-value=2.4e-06 Score=81.30 Aligned_cols=130 Identities=23% Similarity=0.324 Sum_probs=81.4
Q ss_pred EEEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEe
Q 013879 63 YAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFL 142 (434)
Q Consensus 63 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~i 142 (434)
..++++++. ..+.|..+. .+...|.||+++||||+++..+..+.+ .+. + +..+++.+
T Consensus 3 ~~~~~~~~~---~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~-----------~l~-~-----~g~~vi~~ 59 (288)
T TIGR01250 3 IEGIITVDG---GYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLRE-----------LLK-E-----EGREVIMY 59 (288)
T ss_pred ccceecCCC---CeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHH-----------HHH-h-----cCCEEEEE
Confidence 345666542 444444322 233468899999999998652333321 111 1 14689999
Q ss_pred eCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeee
Q 013879 143 ESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDL 222 (434)
Q Consensus 143 DqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inL 222 (434)
|.| |.|.|........ ..+.+..++++..+++. +...+++++|+|+||..+..+|.+-. -.+
T Consensus 60 d~~-G~G~s~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~p---------~~v 121 (288)
T TIGR01250 60 DQL-GCGYSDQPDDSDE-LWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKYG---------QHL 121 (288)
T ss_pred cCC-CCCCCCCCCcccc-cccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhCc---------ccc
Confidence 999 9999864322110 12566677776665542 23456999999999999888886532 237
Q ss_pred eeeEecCCCCC
Q 013879 223 KGILLGNPETS 233 (434)
Q Consensus 223 kGi~IGNg~id 233 (434)
+++++.++...
T Consensus 122 ~~lvl~~~~~~ 132 (288)
T TIGR01250 122 KGLIISSMLDS 132 (288)
T ss_pred ceeeEeccccc
Confidence 88888887654
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.37 E-value=2.9e-06 Score=81.18 Aligned_cols=109 Identities=16% Similarity=0.102 Sum_probs=75.3
Q ss_pred CCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHH
Q 013879 87 RPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDF 166 (434)
Q Consensus 87 ~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~ 166 (434)
.+++.|.||+++|.+|.+.. +..+.+ .|. +..+++.+|.| |.|.|....... .+.+.
T Consensus 24 g~~~~~~vv~~hG~~~~~~~-~~~~~~-----------~l~-------~~~~vi~~D~~-G~G~S~~~~~~~---~~~~~ 80 (278)
T TIGR03056 24 GPTAGPLLLLLHGTGASTHS-WRDLMP-----------PLA-------RSFRVVAPDLP-GHGFTRAPFRFR---FTLPS 80 (278)
T ss_pred CCCCCCeEEEEcCCCCCHHH-HHHHHH-----------HHh-------hCcEEEeecCC-CCCCCCCccccC---CCHHH
Confidence 34456899999999887766 544331 121 23689999988 999985433212 26777
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCc
Q 013879 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (434)
Q Consensus 167 ~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp 234 (434)
.++++.++++. +...+++|+|+|+||..+..+|.+.. -.++++++.++..++
T Consensus 81 ~~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p---------~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 81 MAEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDGP---------VTPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhCC---------cccceEEEEcCcccc
Confidence 78888777753 22357899999999998877775432 237889988887654
No 13
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.34 E-value=2.7e-06 Score=83.01 Aligned_cols=123 Identities=13% Similarity=0.115 Sum_probs=85.4
Q ss_pred EEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCC
Q 013879 66 YVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESP 145 (434)
Q Consensus 66 y~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqP 145 (434)
|++++ +.+++|.- ..++ .|.||+|||.++++.+ +..+.+ .| .+.++++.+|.|
T Consensus 12 ~~~~~---~~~i~y~~----~G~~-~~~vlllHG~~~~~~~-w~~~~~-----------~L-------~~~~~vi~~Dlp 64 (294)
T PLN02824 12 TWRWK---GYNIRYQR----AGTS-GPALVLVHGFGGNADH-WRKNTP-----------VL-------AKSHRVYAIDLL 64 (294)
T ss_pred eEEEc---CeEEEEEE----cCCC-CCeEEEECCCCCChhH-HHHHHH-----------HH-------HhCCeEEEEcCC
Confidence 66664 35676652 1222 3789999999998888 765542 22 234699999999
Q ss_pred CCcCcCCccCCCC---CcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeee
Q 013879 146 IGVGFSYSNTTND---YEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDL 222 (434)
Q Consensus 146 vg~GfSy~~~~~~---~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inL 222 (434)
|.|.|-...... ...++.++.|+++.++|+.. ...+++|+|+|.||..+-.+|.+-.+. +
T Consensus 65 -G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~~---------v 127 (294)
T PLN02824 65 -GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPEL---------V 127 (294)
T ss_pred -CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChhh---------e
Confidence 999996432211 01136677788888777643 246899999999999998888765443 8
Q ss_pred eeeEecCCCC
Q 013879 223 KGILLGNPET 232 (434)
Q Consensus 223 kGi~IGNg~i 232 (434)
+++++.|+..
T Consensus 128 ~~lili~~~~ 137 (294)
T PLN02824 128 RGVMLINISL 137 (294)
T ss_pred eEEEEECCCc
Confidence 9999988754
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=98.32 E-value=3.7e-06 Score=81.18 Aligned_cols=125 Identities=13% Similarity=0.113 Sum_probs=82.9
Q ss_pred CCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCccc-CcceeEeeCCCCcCcC
Q 013879 73 NGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNK-EANMLFLESPIGVGFS 151 (434)
Q Consensus 73 ~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~-~~n~l~iDqPvg~GfS 151 (434)
.|..|+|.+++.. +..+|+||.+||..+++.. +-.+.+ . +.+ -..++-+|.| |.|.|
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~~~-----------~-------l~~~g~~via~D~~-G~G~S 66 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEELAE-----------N-------ISSLGILVFSHDHI-GHGRS 66 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHHHH-----------H-------HHhCCCEEEEccCC-CCCCC
Confidence 4578999888764 3456899999999777766 544431 1 222 3589999988 99998
Q ss_pred CccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 152 YSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 152 y~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
-.... .. .+-....+++..++..+-+.++ ..+++|+|+|.||..+..+|.+-. -+++|+++.+|.
T Consensus 67 ~~~~~-~~--~~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~~p---------~~i~~lil~~p~ 131 (276)
T PHA02857 67 NGEKM-MI--DDFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYKNP---------NLFTAMILMSPL 131 (276)
T ss_pred CCccC-Cc--CCHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHhCc---------cccceEEEeccc
Confidence 53211 11 1334455677776665444333 578999999999987766664321 138999999987
Q ss_pred CCc
Q 013879 232 TST 234 (434)
Q Consensus 232 idp 234 (434)
+++
T Consensus 132 ~~~ 134 (276)
T PHA02857 132 VNA 134 (276)
T ss_pred ccc
Confidence 653
No 15
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.26 E-value=6.3e-06 Score=81.25 Aligned_cols=127 Identities=18% Similarity=0.287 Sum_probs=79.6
Q ss_pred EEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEee
Q 013879 64 AGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLE 143 (434)
Q Consensus 64 sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iD 143 (434)
.+|+.+.+ +.+++|.-. ..+. .|.||+++|+||.++. ..... .+ . .+..+++.+|
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~-~~~~~------------~~--~----~~~~~vi~~D 60 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTD-PGCRR------------FF--D----PETYRIVLFD 60 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCC-HHHHh------------cc--C----ccCCEEEEEC
Confidence 57888764 477888632 2233 4557899999987654 21110 00 0 1347999999
Q ss_pred CCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeee
Q 013879 144 SPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLK 223 (434)
Q Consensus 144 qPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLk 223 (434)
.| |.|.|..... ... .+.++.++++..+++ .. ...+++++|+|+||..+..+|.+-.+. ++
T Consensus 61 ~~-G~G~S~~~~~-~~~-~~~~~~~~dl~~l~~----~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~---------v~ 121 (306)
T TIGR01249 61 QR-GCGKSTPHAC-LEE-NTTWDLVADIEKLRE----KL---GIKNWLVFGGSWGSTLALAYAQTHPEV---------VT 121 (306)
T ss_pred CC-CCCCCCCCCC-ccc-CCHHHHHHHHHHHHH----Hc---CCCCEEEEEECHHHHHHHHHHHHChHh---------hh
Confidence 98 9999963321 111 144555666555443 22 235799999999999888887654332 78
Q ss_pred eeEecCCCCCc
Q 013879 224 GILLGNPETST 234 (434)
Q Consensus 224 Gi~IGNg~idp 234 (434)
++++.+..+.+
T Consensus 122 ~lvl~~~~~~~ 132 (306)
T TIGR01249 122 GLVLRGIFLLR 132 (306)
T ss_pred hheeeccccCC
Confidence 88887776543
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.21 E-value=5.8e-06 Score=78.41 Aligned_cols=104 Identities=17% Similarity=0.243 Sum_probs=77.0
Q ss_pred CCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChH
Q 013879 86 TRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDD 165 (434)
Q Consensus 86 ~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~ 165 (434)
.++.+.|.||+++|.+|.+.. +..+.+ .+ .+..+++.+|.| |.|.|.... . .+.+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D~~-G~G~s~~~~--~---~~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLAR-----------DL-------VNDHDIIQVDMR-NHGLSPRDP--V---MNYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHH-----------HH-------hhCCeEEEECCC-CCCCCCCCC--C---CCHH
Confidence 356678999999999988877 655542 12 245699999999 999885322 2 2667
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCC
Q 013879 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNP 230 (434)
Q Consensus 166 ~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg 230 (434)
+.++++.++|..+ ...+++|+|+|.||..+..+|.+..+. ++++++.++
T Consensus 66 ~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~~---------v~~lvli~~ 114 (255)
T PRK10673 66 AMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPDR---------IDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHhh---------cceEEEEec
Confidence 7888988888742 335799999999999999988765443 788887664
No 17
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.15 E-value=7e-06 Score=74.74 Aligned_cols=104 Identities=23% Similarity=0.330 Sum_probs=74.9
Q ss_pred EEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHH
Q 013879 94 VLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYT 173 (434)
Q Consensus 94 ~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~ 173 (434)
||+++|.+|.+.. +..+.+ .+. +..+++.+|.| |.|.|-.... ....+.++.++++.+
T Consensus 1 vv~~hG~~~~~~~-~~~~~~-----------~l~-------~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAE-----------ALA-------RGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHH-----------HHH-------TTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHH-----------HHh-------CCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhh
Confidence 7899999998877 665542 221 45689999999 9999964432 112256777777777
Q ss_pred HHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 174 FLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 174 fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
+|+. .. ..+++|+|+|+||..+..+|.+..+ .++|+++.++.....
T Consensus 59 ~l~~----~~---~~~~~lvG~S~Gg~~a~~~a~~~p~---------~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 59 LLDA----LG---IKKVILVGHSMGGMIALRLAARYPD---------RVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHH----TT---TSSEEEEEETHHHHHHHHHHHHSGG---------GEEEEEEESESSSHH
T ss_pred cccc----cc---ccccccccccccccccccccccccc---------ccccceeeccccccc
Confidence 7653 22 3689999999999999888866433 399999999887654
No 18
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.07 E-value=3.9e-05 Score=76.29 Aligned_cols=139 Identities=17% Similarity=0.182 Sum_probs=85.9
Q ss_pred eeEEEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCccc-Ccce
Q 013879 61 RHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNK-EANM 139 (434)
Q Consensus 61 ~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~-~~n~ 139 (434)
+...+++... .|..++|+.+.........|+||++||..+.++..+-.+. ..+.+ -.++
T Consensus 31 ~~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~------------------~~L~~~Gy~V 90 (330)
T PLN02298 31 KGSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTA------------------IFLAQMGFAC 90 (330)
T ss_pred ccccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHH------------------HHHHhCCCEE
Confidence 3446677654 3578888655332222356899999998433322111111 01222 4699
Q ss_pred eEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCce
Q 013879 140 LFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLY 219 (434)
Q Consensus 140 l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~ 219 (434)
+.+|.| |.|.|-.. ..... +.+..++|+..+++..-. ..++...+++|+|+|.||..+..+|.+- .
T Consensus 91 ~~~D~r-GhG~S~~~--~~~~~-~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~~---p------ 156 (330)
T PLN02298 91 FALDLE-GHGRSEGL--RAYVP-NVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLAN---P------ 156 (330)
T ss_pred EEecCC-CCCCCCCc--cccCC-CHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhcC---c------
Confidence 999999 99998422 12211 566778888888875432 2234456899999999998776655421 1
Q ss_pred eeeeeeEecCCCCC
Q 013879 220 IDLKGILLGNPETS 233 (434)
Q Consensus 220 inLkGi~IGNg~id 233 (434)
-.++|+++.+++.+
T Consensus 157 ~~v~~lvl~~~~~~ 170 (330)
T PLN02298 157 EGFDGAVLVAPMCK 170 (330)
T ss_pred ccceeEEEeccccc
Confidence 13899999888754
No 19
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.04 E-value=3.4e-05 Score=75.31 Aligned_cols=115 Identities=17% Similarity=0.155 Sum_probs=81.2
Q ss_pred CeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCc
Q 013879 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (434)
Q Consensus 74 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~ 153 (434)
+..++|.-. . +.|.||++||.|+.+.. +-.+.+ .| .+...++-+|.| |.|.|-.
T Consensus 16 g~~i~y~~~----G--~g~~vvllHG~~~~~~~-w~~~~~-----------~L-------~~~~~via~D~~-G~G~S~~ 69 (295)
T PRK03592 16 GSRMAYIET----G--EGDPIVFLHGNPTSSYL-WRNIIP-----------HL-------AGLGRCLAPDLI-GMGASDK 69 (295)
T ss_pred CEEEEEEEe----C--CCCEEEEECCCCCCHHH-HHHHHH-----------HH-------hhCCEEEEEcCC-CCCCCCC
Confidence 356776522 1 34789999999988887 654431 12 233489999999 9999953
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCC
Q 013879 154 NTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (434)
Q Consensus 154 ~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~id 233 (434)
.. .. .+.+..|+++..+++. +...+++|.|+|.||..+-.+|.+-.+. ++++++.|+...
T Consensus 70 ~~-~~---~~~~~~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p~~---------v~~lil~~~~~~ 129 (295)
T PRK03592 70 PD-ID---YTFADHARYLDAWFDA-------LGLDDVVLVGHDWGSALGFDWAARHPDR---------VRGIAFMEAIVR 129 (295)
T ss_pred CC-CC---CCHHHHHHHHHHHHHH-------hCCCCeEEEEECHHHHHHHHHHHhChhh---------eeEEEEECCCCC
Confidence 22 22 2567777887777764 2346899999999999988888765443 899999998654
Q ss_pred c
Q 013879 234 T 234 (434)
Q Consensus 234 p 234 (434)
+
T Consensus 130 ~ 130 (295)
T PRK03592 130 P 130 (295)
T ss_pred C
Confidence 4
No 20
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.04 E-value=4.1e-05 Score=76.97 Aligned_cols=129 Identities=16% Similarity=0.197 Sum_probs=81.7
Q ss_pred CCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCC
Q 013879 73 NGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSY 152 (434)
Q Consensus 73 ~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy 152 (434)
.|..+|+...... +.+.+|+||++||..+.++..+-.+.+ .+.. .-.+++-+|.| |.|.|-
T Consensus 70 ~g~~l~~~~~~p~-~~~~~~~iv~lHG~~~~~~~~~~~~~~-----------~l~~------~g~~v~~~D~~-G~G~S~ 130 (349)
T PLN02385 70 RGVEIFSKSWLPE-NSRPKAAVCFCHGYGDTCTFFFEGIAR-----------KIAS------SGYGVFAMDYP-GFGLSE 130 (349)
T ss_pred CCCEEEEEEEecC-CCCCCeEEEEECCCCCccchHHHHHHH-----------HHHh------CCCEEEEecCC-CCCCCC
Confidence 4577888665433 224569999999986654431121210 1111 23689999999 999985
Q ss_pred ccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 153 SNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 153 ~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
... .+.. +.+..++++.++++.. ...+++...+++|+|||+||..+..+|.+-.+ .++|+++.+|..
T Consensus 131 ~~~--~~~~-~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~---------~v~glVLi~p~~ 197 (349)
T PLN02385 131 GLH--GYIP-SFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN---------AWDGAILVAPMC 197 (349)
T ss_pred CCC--CCcC-CHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhCcc---------hhhheeEecccc
Confidence 321 2211 5566788888777653 33345556689999999999887766543211 278999988764
Q ss_pred C
Q 013879 233 S 233 (434)
Q Consensus 233 d 233 (434)
.
T Consensus 198 ~ 198 (349)
T PLN02385 198 K 198 (349)
T ss_pred c
Confidence 3
No 21
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.02 E-value=3.2e-05 Score=74.77 Aligned_cols=117 Identities=16% Similarity=0.145 Sum_probs=79.6
Q ss_pred CeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCc
Q 013879 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (434)
Q Consensus 74 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~ 153 (434)
+..+.|+..+ . .+..|.||++||-++.+.. +..+.+ .| .+..+++.+|.| |.|.|-.
T Consensus 11 ~~~~~~~~~~--~-~~~~~plvllHG~~~~~~~-w~~~~~-----------~L-------~~~~~vi~~Dl~-G~G~S~~ 67 (276)
T TIGR02240 11 GQSIRTAVRP--G-KEGLTPLLIFNGIGANLEL-VFPFIE-----------AL-------DPDLEVIAFDVP-GVGGSST 67 (276)
T ss_pred CcEEEEEEec--C-CCCCCcEEEEeCCCcchHH-HHHHHH-----------Hh-------ccCceEEEECCC-CCCCCCC
Confidence 4578887543 1 2344678999997666666 544432 12 245699999999 9999942
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCC
Q 013879 154 NTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (434)
Q Consensus 154 ~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~id 233 (434)
. ... .+.+..++++.++|.. +.-.+++|+|+|+||..+-.+|.+-.+. ++++++.|+...
T Consensus 68 ~-~~~---~~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~p~~---------v~~lvl~~~~~~ 127 (276)
T TIGR02240 68 P-RHP---YRFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDYPER---------CKKLILAATAAG 127 (276)
T ss_pred C-CCc---CcHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHCHHH---------hhheEEeccCCc
Confidence 2 112 2556667777766664 2235799999999999888888654443 899999988754
No 22
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.99 E-value=5.3e-05 Score=74.02 Aligned_cols=123 Identities=16% Similarity=0.205 Sum_probs=76.7
Q ss_pred eEEEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeE
Q 013879 62 HYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLF 141 (434)
Q Consensus 62 ~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~ 141 (434)
..+.+++++ +..++|-- . . ..|.||+|||.|..+.. +-.+.+ . +.+..+++-
T Consensus 14 ~~~~~~~~~---~~~i~y~~---~-G--~~~~iv~lHG~~~~~~~-~~~~~~-----------~-------l~~~~~vi~ 65 (286)
T PRK03204 14 FESRWFDSS---RGRIHYID---E-G--TGPPILLCHGNPTWSFL-YRDIIV-----------A-------LRDRFRCVA 65 (286)
T ss_pred ccceEEEcC---CcEEEEEE---C-C--CCCEEEEECCCCccHHH-HHHHHH-----------H-------HhCCcEEEE
Confidence 335677774 35566552 2 2 24789999999865554 433321 1 223479999
Q ss_pred eeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceee
Q 013879 142 LESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYID 221 (434)
Q Consensus 142 iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~in 221 (434)
+|.| |.|.|-... +.. .+.+..++++..+++. +...+++|+|+|+||..+-.+|.+-.+ .
T Consensus 66 ~D~~-G~G~S~~~~--~~~-~~~~~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~va~~~a~~~p~---------~ 125 (286)
T PRK03204 66 PDYL-GFGLSERPS--GFG-YQIDEHARVIGEFVDH-------LGLDRYLSMGQDWGGPISMAVAVERAD---------R 125 (286)
T ss_pred ECCC-CCCCCCCCC--ccc-cCHHHHHHHHHHHHHH-------hCCCCEEEEEECccHHHHHHHHHhChh---------h
Confidence 9988 999884222 111 2456666666665543 224579999999999876555543222 3
Q ss_pred eeeeEecCCCC
Q 013879 222 LKGILLGNPET 232 (434)
Q Consensus 222 LkGi~IGNg~i 232 (434)
+++++++++..
T Consensus 126 v~~lvl~~~~~ 136 (286)
T PRK03204 126 VRGVVLGNTWF 136 (286)
T ss_pred eeEEEEECccc
Confidence 88999887753
No 23
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.99 E-value=6.1e-05 Score=77.22 Aligned_cols=128 Identities=20% Similarity=0.228 Sum_probs=85.1
Q ss_pred CCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCC
Q 013879 73 NGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSY 152 (434)
Q Consensus 73 ~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy 152 (434)
.+..+|++.++.. ..+.+|+||++||.++.+.. +-.+.+ .+. .+-.+++-+|.| |.|.|-
T Consensus 119 ~~~~l~~~~~~p~-~~~~~~~Vl~lHG~~~~~~~-~~~~a~-----------~L~------~~Gy~V~~~D~r-GhG~S~ 178 (395)
T PLN02652 119 RRNALFCRSWAPA-AGEMRGILIIIHGLNEHSGR-YLHFAK-----------QLT------SCGFGVYAMDWI-GHGGSD 178 (395)
T ss_pred CCCEEEEEEecCC-CCCCceEEEEECCchHHHHH-HHHHHH-----------HHH------HCCCEEEEeCCC-CCCCCC
Confidence 4567888877664 23456899999999776665 443331 121 123589999999 999884
Q ss_pred ccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 153 SNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 153 ~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
... .+.. +.+..++|+..+++..-..+| ..+++|+|||+||..+..+|. +.+ ..-.++|+++.+|++
T Consensus 179 ~~~--~~~~-~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~---~~~~v~glVL~sP~l 245 (395)
T PLN02652 179 GLH--GYVP-SLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS---IEDKLEGIVLTSPAL 245 (395)
T ss_pred CCC--CCCc-CHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC---cccccceEEEECccc
Confidence 322 2222 556667788888876655555 458999999999988765542 111 112388999988876
Q ss_pred C
Q 013879 233 S 233 (434)
Q Consensus 233 d 233 (434)
+
T Consensus 246 ~ 246 (395)
T PLN02652 246 R 246 (395)
T ss_pred c
Confidence 4
No 24
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.95 E-value=3e-05 Score=72.99 Aligned_cols=100 Identities=20% Similarity=0.240 Sum_probs=70.5
Q ss_pred CCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHH
Q 013879 91 KPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAND 170 (434)
Q Consensus 91 ~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~ 170 (434)
.|.||+++|.+|++.. +-.+.+ .+ +..+++.+|-| |.|.|.... . .+.+..|++
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~-----------~l--------~~~~vi~~D~~-G~G~S~~~~--~---~~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGE-----------AL--------PDYPRLYIDLP-GHGGSAAIS--V---DGFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHH-----------Hc--------CCCCEEEecCC-CCCCCCCcc--c---cCHHHHHHH
Confidence 5889999999998877 654431 11 23799999988 999984221 1 156667777
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 171 ~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
+.++|.. +...+++++|+|+||..+-.+|.+.... -++++++.++.
T Consensus 56 l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~~--------~v~~lvl~~~~ 101 (242)
T PRK11126 56 LSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLAG--------GLCGLIVEGGN 101 (242)
T ss_pred HHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCcc--------cccEEEEeCCC
Confidence 7776653 2346899999999998888888753211 17788887654
No 25
>PRK06489 hypothetical protein; Provisional
Probab=97.93 E-value=8.8e-05 Score=74.93 Aligned_cols=140 Identities=16% Similarity=0.124 Sum_probs=78.8
Q ss_pred ceeEEEEEEeecCCCeeEEEEEEEec---CCCCCCCEEEEECCCCChhhhhhh--hhhccCCeeEcCCCCccc-cCCCCc
Q 013879 60 FRHYAGYVTVNEHNGRALFYWFYEAM---TRPQEKPLVLWLNGGPGCSSVGYG--ATQEIGPFLVDTDGRGLQ-FNPYAW 133 (434)
Q Consensus 60 ~~~~sGy~~v~~~~~~~lfy~f~es~---~~~~~~Pl~lwlnGGPG~ss~~~g--~~~E~GP~~v~~~~~~l~-~n~~sW 133 (434)
+...+|. .++ +..++|.-+... .++++.|.||.+||++|.+.. +- .+.+ .+. ....--
T Consensus 39 ~~~~~~~-~~~---g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~-~~~~~~~~-----------~l~~~~~~l~ 102 (360)
T PRK06489 39 FTFHSGE-TLP---ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS-FLSPTFAG-----------ELFGPGQPLD 102 (360)
T ss_pred eeccCCC-CcC---CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh-hccchhHH-----------HhcCCCCccc
Confidence 4455664 222 366777643210 012236889999999887655 31 1110 000 000001
Q ss_pred ccCcceeEeeCCCCcCcCCccCCC---CCcccChHHHHHHHHHHHHHHHHHCCCCCCCcE-EEEeeccCcccchHHHHHH
Q 013879 134 NKEANMLFLESPIGVGFSYSNTTN---DYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTF-YIAGESYAGRYIPELTELI 209 (434)
Q Consensus 134 ~~~~n~l~iDqPvg~GfSy~~~~~---~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~-~i~GESYgG~yvp~~a~~i 209 (434)
.+..+++.+|.| |.|.|-..... ....++.++.++++..++.+ ++.-.++ +|+|+|+||..+-.+|.+-
T Consensus 103 ~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~------~lgi~~~~~lvG~SmGG~vAl~~A~~~ 175 (360)
T PRK06489 103 ASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE------GLGVKHLRLILGTSMGGMHAWMWGEKY 175 (360)
T ss_pred ccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH------hcCCCceeEEEEECHHHHHHHHHHHhC
Confidence 345799999999 99998532211 00112556666666655432 2222356 4899999999888888665
Q ss_pred HhhcCCCCceeeeeeeEecCCC
Q 013879 210 HDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 210 ~~~n~~~~~~inLkGi~IGNg~ 231 (434)
.+. ++++++.++.
T Consensus 176 P~~---------V~~LVLi~s~ 188 (360)
T PRK06489 176 PDF---------MDALMPMASQ 188 (360)
T ss_pred chh---------hheeeeeccC
Confidence 443 7788876654
No 26
>PLN02578 hydrolase
Probab=97.92 E-value=9e-05 Score=74.73 Aligned_cols=112 Identities=15% Similarity=0.156 Sum_probs=74.9
Q ss_pred CeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCc
Q 013879 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (434)
Q Consensus 74 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~ 153 (434)
+.+++|.-. . +.|.||.+||-++.+.. +..+.+ .| .+..+++.+|.| |.|.|-.
T Consensus 75 ~~~i~Y~~~----g--~g~~vvliHG~~~~~~~-w~~~~~-----------~l-------~~~~~v~~~D~~-G~G~S~~ 128 (354)
T PLN02578 75 GHKIHYVVQ----G--EGLPIVLIHGFGASAFH-WRYNIP-----------EL-------AKKYKVYALDLL-GFGWSDK 128 (354)
T ss_pred CEEEEEEEc----C--CCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hcCCEEEEECCC-CCCCCCC
Confidence 366777632 1 23557899997665554 433321 12 234789999999 9998843
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 154 NTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 154 ~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
.. .. ++.+..++++.+|++.. ...+++|+|+|+||..+..+|.+-.+. ++++++.|+.
T Consensus 129 ~~-~~---~~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~~---------v~~lvLv~~~ 186 (354)
T PLN02578 129 AL-IE---YDAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPEL---------VAGVALLNSA 186 (354)
T ss_pred cc-cc---cCHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChHh---------cceEEEECCC
Confidence 21 12 25566677777777642 246899999999999888888766543 8889888764
No 27
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.90 E-value=3.3e-05 Score=77.55 Aligned_cols=133 Identities=20% Similarity=0.354 Sum_probs=79.6
Q ss_pred eEEEEEEEe--cCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCc
Q 013879 76 ALFYWFYEA--MTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (434)
Q Consensus 76 ~lfy~f~es--~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~ 153 (434)
+-.||++++ +.+|++||+||++||| |.+.+.=|+.+. ...+-+...+...+|.+|-..-. | .
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~-----~L~~i~~~l~~~SILvLDYsLt~--~-~ 168 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIE-----FLLNIYKLLPEVSILVLDYSLTS--S-D 168 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHH-----HHHHHHHHcCCCeEEEEeccccc--c-c
Confidence 346999985 3468889999999998 333444444332 11112222223489999955332 0 0
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCC
Q 013879 154 NTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (434)
Q Consensus 154 ~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~id 233 (434)
..+..++ ..-.++-..++-| .+.. ...++.|+|+|-||+-+-.+..++.+.++. .. =|++++.+||++
T Consensus 169 ~~~~~yP--tQL~qlv~~Y~~L---v~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~---~~-Pk~~iLISPWv~ 236 (374)
T PF10340_consen 169 EHGHKYP--TQLRQLVATYDYL---VESE---GNKNIILMGDSAGGNLALSFLQYLKKPNKL---PY-PKSAILISPWVN 236 (374)
T ss_pred cCCCcCc--hHHHHHHHHHHHH---Hhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCCC---CC-CceeEEECCCcC
Confidence 0112232 2222223333333 2222 246899999999999999999998775542 22 378889999999
Q ss_pred chh
Q 013879 234 TAE 236 (434)
Q Consensus 234 p~~ 236 (434)
+..
T Consensus 237 l~~ 239 (374)
T PF10340_consen 237 LVP 239 (374)
T ss_pred CcC
Confidence 973
No 28
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.88 E-value=5.4e-05 Score=69.93 Aligned_cols=105 Identities=23% Similarity=0.310 Sum_probs=68.5
Q ss_pred CCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHH
Q 013879 91 KPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAND 170 (434)
Q Consensus 91 ~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~ 170 (434)
.|.||+++|.+|.+.. +-.+.+ .|. +..+++-+|.| |.|.|.... .....+.++.+++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~~-----------~L~-------~~~~v~~~d~~-g~G~s~~~~--~~~~~~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALIE-----------LLG-------PHFRCLAIDLP-GHGSSQSPD--EIERYDFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHHH-----------Hhc-------ccCeEEEEcCC-CCCCCCCCC--ccChhhHHHHHHH
Confidence 3789999999888777 543331 121 33689999988 999884322 1111244555555
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 171 ~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
+. ..+.+.. ..++++|+|+|+||..+..+|.+..+ .++++++.++..
T Consensus 59 ~~---~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~---------~v~~lil~~~~~ 105 (251)
T TIGR03695 59 IL---ATLLDQL---GIEPFFLVGYSMGGRIALYYALQYPE---------RVQGLILESGSP 105 (251)
T ss_pred HH---HHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCch---------heeeeEEecCCC
Confidence 22 2222333 35689999999999998888876432 288888877753
No 29
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.82 E-value=0.00011 Score=74.87 Aligned_cols=132 Identities=16% Similarity=0.145 Sum_probs=84.4
Q ss_pred CceeEEEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcc
Q 013879 59 DFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEAN 138 (434)
Q Consensus 59 ~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n 138 (434)
.+++-+|+.-. ..+-.+||. +..+...|.||.|||.|+.+.. +-.+.+ .| .+..+
T Consensus 101 ~~~~~~~~~~~--~~~~~~~y~----~~G~~~~~~ivllHG~~~~~~~-w~~~~~-----------~L-------~~~~~ 155 (383)
T PLN03084 101 GLKMGAQSQAS--SDLFRWFCV----ESGSNNNPPVLLIHGFPSQAYS-YRKVLP-----------VL-------SKNYH 155 (383)
T ss_pred cccccceeEEc--CCceEEEEE----ecCCCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hcCCE
Confidence 34555555543 234556655 2234456899999999887766 554431 12 23469
Q ss_pred eeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCc
Q 013879 139 MLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSL 218 (434)
Q Consensus 139 ~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~ 218 (434)
++-+|.| |.|.|...........+.+..++++..+++.. ...+++|+|+|+||..+-.+|.+-.+
T Consensus 156 Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~~~P~------- 220 (383)
T PLN03084 156 AIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYASAHPD------- 220 (383)
T ss_pred EEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHHHhChH-------
Confidence 9999999 99999543221001126677788877777642 23579999999999765555543322
Q ss_pred eeeeeeeEecCCCC
Q 013879 219 YIDLKGILLGNPET 232 (434)
Q Consensus 219 ~inLkGi~IGNg~i 232 (434)
.++++++.|+..
T Consensus 221 --~v~~lILi~~~~ 232 (383)
T PLN03084 221 --KIKKLILLNPPL 232 (383)
T ss_pred --hhcEEEEECCCC
Confidence 289999998764
No 30
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.82 E-value=0.0001 Score=75.82 Aligned_cols=109 Identities=14% Similarity=0.223 Sum_probs=70.2
Q ss_pred CCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHH
Q 013879 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTA 168 (434)
Q Consensus 89 ~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a 168 (434)
.+.|.||+|||.++.+.. +....+ .+ .+..+++-+|.| |.|.|-.. .....+.++..
T Consensus 103 ~~~p~vvllHG~~~~~~~-~~~~~~-----------~L-------~~~~~vi~~D~r-G~G~S~~~---~~~~~~~~~~~ 159 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGF-FFRNFD-----------AL-------ASRFRVIAIDQL-GWGGSSRP---DFTCKSTEETE 159 (402)
T ss_pred CCCCEEEEECCCCcchhH-HHHHHH-----------HH-------HhCCEEEEECCC-CCCCCCCC---CcccccHHHHH
Confidence 466999999999776665 432210 12 234689999999 99988321 11111334444
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 169 ~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
+.+.+.+..|.+.. ...+++|+|||+||..+..+|.+-.+ .++++++.++..
T Consensus 160 ~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~---------~v~~lvl~~p~~ 211 (402)
T PLN02894 160 AWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHPE---------HVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCch---------hhcEEEEECCcc
Confidence 44556666666533 23589999999999987777755322 278888887753
No 31
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.81 E-value=6.5e-05 Score=69.61 Aligned_cols=103 Identities=17% Similarity=0.244 Sum_probs=68.5
Q ss_pred CCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHH
Q 013879 88 PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFT 167 (434)
Q Consensus 88 ~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~ 167 (434)
++.+|++|.++|-++.+.. +..+.| .+ .+..+++.+|.| |.|.|-... .. .+.++.
T Consensus 10 ~~~~~~li~~hg~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~~-G~G~s~~~~-~~---~~~~~~ 65 (251)
T TIGR02427 10 ADGAPVLVFINSLGTDLRM-WDPVLP-----------AL-------TPDFRVLRYDKR-GHGLSDAPE-GP---YSIEDL 65 (251)
T ss_pred CCCCCeEEEEcCcccchhh-HHHHHH-----------Hh-------hcccEEEEecCC-CCCCCCCCC-CC---CCHHHH
Confidence 3367999999986555555 443332 11 134699999999 999884221 12 256777
Q ss_pred HHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCC
Q 013879 168 ANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNP 230 (434)
Q Consensus 168 a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg 230 (434)
++++.++++.+ ...+++++|+|+||..+-.+|.+-.+. ++++++.++
T Consensus 66 ~~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~~p~~---------v~~li~~~~ 112 (251)
T TIGR02427 66 ADDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAARRPDR---------VRALVLSNT 112 (251)
T ss_pred HHHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHHCHHH---------hHHHhhccC
Confidence 77777777632 235799999999999988888654332 666666554
No 32
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.80 E-value=0.00012 Score=70.41 Aligned_cols=107 Identities=16% Similarity=0.177 Sum_probs=65.3
Q ss_pred CCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHH
Q 013879 90 EKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAN 169 (434)
Q Consensus 90 ~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~ 169 (434)
+.|.||+|+|.++.+.. +..+.. .+. .-..+..+++-+|.| |.|.|-.... +.. .....++
T Consensus 29 ~~~~ivllHG~~~~~~~-~~~~~~-----------~~~---~l~~~~~~vi~~D~~-G~G~S~~~~~-~~~--~~~~~~~ 89 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGG-WSNYYR-----------NIG---PFVDAGYRVILKDSP-GFNKSDAVVM-DEQ--RGLVNAR 89 (282)
T ss_pred CCCeEEEECCCCCchhh-HHHHHH-----------HHH---HHHhCCCEEEEECCC-CCCCCCCCcC-ccc--ccchhHH
Confidence 34779999998655444 321110 000 001234799999998 9999943211 111 1123355
Q ss_pred HHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 170 DSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 170 ~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
++.++++. +...+++++|+|+||..+-.+|.+-.+. ++++++.+|.
T Consensus 90 ~l~~~l~~-------l~~~~~~lvG~S~Gg~ia~~~a~~~p~~---------v~~lvl~~~~ 135 (282)
T TIGR03343 90 AVKGLMDA-------LDIEKAHLVGNSMGGATALNFALEYPDR---------IGKLILMGPG 135 (282)
T ss_pred HHHHHHHH-------cCCCCeeEEEECchHHHHHHHHHhChHh---------hceEEEECCC
Confidence 55555542 3356899999999999999998765443 6777777653
No 33
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.79 E-value=0.00014 Score=70.72 Aligned_cols=106 Identities=12% Similarity=0.143 Sum_probs=70.4
Q ss_pred CCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHH
Q 013879 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTA 168 (434)
Q Consensus 89 ~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a 168 (434)
.+.|.||++||..+.++. +..+.+ .|.. +-.+++-+|.| |.|.|....... .+.++.+
T Consensus 16 ~~~p~vvliHG~~~~~~~-w~~~~~-----------~L~~------~g~~vi~~dl~-g~G~s~~~~~~~---~~~~~~~ 73 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWC-WYKIRC-----------LMEN------SGYKVTCIDLK-SAGIDQSDADSV---TTFDEYN 73 (273)
T ss_pred CCCCeEEEECCCCCCcCc-HHHHHH-----------HHHh------CCCEEEEeccc-CCCCCCCCcccC---CCHHHHH
Confidence 567999999998777776 544431 1221 23589999999 999874322211 2566667
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 169 ~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
+++.++|+. .. ...+++|+||||||..+..++.+..+. ++++++.++.
T Consensus 74 ~~l~~~i~~----l~--~~~~v~lvGhS~GG~v~~~~a~~~p~~---------v~~lv~~~~~ 121 (273)
T PLN02211 74 KPLIDFLSS----LP--ENEKVILVGHSAGGLSVTQAIHRFPKK---------ICLAVYVAAT 121 (273)
T ss_pred HHHHHHHHh----cC--CCCCEEEEEECchHHHHHHHHHhChhh---------eeEEEEeccc
Confidence 776666653 21 136899999999999888777544322 7788776654
No 34
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.76 E-value=0.00011 Score=72.35 Aligned_cols=137 Identities=15% Similarity=0.205 Sum_probs=91.1
Q ss_pred CceeEEEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcc
Q 013879 59 DFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEAN 138 (434)
Q Consensus 59 ~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n 138 (434)
+++..+-|+.+... ... |.++-...+++.+-++.+||= |++++ +|. . |=.+..+..|
T Consensus 62 ~v~~~~~~v~i~~~--~~i--w~~~~~~~~~~~~plVliHGy-GAg~g---~f~------~---------Nf~~La~~~~ 118 (365)
T KOG4409|consen 62 PVPYSKKYVRIPNG--IEI--WTITVSNESANKTPLVLIHGY-GAGLG---LFF------R---------NFDDLAKIRN 118 (365)
T ss_pred CCCcceeeeecCCC--cee--EEEeecccccCCCcEEEEecc-chhHH---HHH------H---------hhhhhhhcCc
Confidence 45556778887632 222 333334445777888899983 44433 221 1 2233445779
Q ss_pred eeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCc
Q 013879 139 MLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSL 218 (434)
Q Consensus 139 ~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~ 218 (434)
+-.||.| |-|.|--.. +.. +.+.+-+.+.+-+++|..... =.+.+|+|||+||-.....|.+-.++
T Consensus 119 vyaiDll-G~G~SSRP~---F~~-d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer------ 184 (365)
T KOG4409|consen 119 VYAIDLL-GFGRSSRPK---FSI-DPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER------ 184 (365)
T ss_pred eEEeccc-CCCCCCCCC---CCC-CcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh------
Confidence 9999999 999994322 221 233344578899999998664 45899999999999888888776665
Q ss_pred eeeeeeeEecCCCCCch
Q 013879 219 YIDLKGILLGNPETSTA 235 (434)
Q Consensus 219 ~inLkGi~IGNg~idp~ 235 (434)
++-+++.+||--|+
T Consensus 185 ---V~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 185 ---VEKLILVSPWGFPE 198 (365)
T ss_pred ---hceEEEeccccccc
Confidence 77789999986554
No 35
>PRK10749 lysophospholipase L2; Provisional
Probab=97.76 E-value=0.00016 Score=72.11 Aligned_cols=126 Identities=16% Similarity=0.129 Sum_probs=80.7
Q ss_pred CeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCc
Q 013879 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (434)
Q Consensus 74 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~ 153 (434)
+.+++|+.++. ++.+|+||.++|-.+.+.. +..+.. .+. .+-.+++-+|.| |.|.|-.
T Consensus 40 g~~l~~~~~~~---~~~~~~vll~HG~~~~~~~-y~~~~~-----------~l~------~~g~~v~~~D~~-G~G~S~~ 97 (330)
T PRK10749 40 DIPIRFVRFRA---PHHDRVVVICPGRIESYVK-YAELAY-----------DLF------HLGYDVLIIDHR-GQGRSGR 97 (330)
T ss_pred CCEEEEEEccC---CCCCcEEEEECCccchHHH-HHHHHH-----------HHH------HCCCeEEEEcCC-CCCCCCC
Confidence 46788886653 2456899999998655544 333220 111 133589999988 9999853
Q ss_pred cCCCCC--cccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 154 NTTNDY--EMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 154 ~~~~~~--~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
...... ...+.+..++++..+++...+.++ ..+++++|+|+||..+-.+|.+- .. .++|+++.+|.
T Consensus 98 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~~---p~------~v~~lvl~~p~ 165 (330)
T PRK10749 98 LLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQRH---PG------VFDAIALCAPM 165 (330)
T ss_pred CCCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHhC---CC------CcceEEEECch
Confidence 211100 011456777788888776544333 56899999999998876666532 11 27899998886
Q ss_pred CC
Q 013879 232 TS 233 (434)
Q Consensus 232 id 233 (434)
..
T Consensus 166 ~~ 167 (330)
T PRK10749 166 FG 167 (330)
T ss_pred hc
Confidence 54
No 36
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.71 E-value=0.00023 Score=74.49 Aligned_cols=132 Identities=14% Similarity=0.129 Sum_probs=83.1
Q ss_pred eeEEEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhh-hhccCCeeEcCCCCccccCCCCcccCcce
Q 013879 61 RHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGA-TQEIGPFLVDTDGRGLQFNPYAWNKEANM 139 (434)
Q Consensus 61 ~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~-~~E~GP~~v~~~~~~l~~n~~sW~~~~n~ 139 (434)
+.-.-|++.+ +..+||+..... ++...|.||++||.+|.+.. +.. +.+ .+.. .+.+...+
T Consensus 175 ~~~~~~~~~~---~~~l~~~~~gp~-~~~~k~~VVLlHG~~~s~~~-W~~~~~~-----------~L~~---~~~~~yrV 235 (481)
T PLN03087 175 KFCTSWLSSS---NESLFVHVQQPK-DNKAKEDVLFIHGFISSSAF-WTETLFP-----------NFSD---AAKSTYRL 235 (481)
T ss_pred ceeeeeEeeC---CeEEEEEEecCC-CCCCCCeEEEECCCCccHHH-HHHHHHH-----------HHHH---HhhCCCEE
Confidence 3445677654 367888865433 22234789999999988877 542 110 1111 13456799
Q ss_pred eEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCce
Q 013879 140 LFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLY 219 (434)
Q Consensus 140 l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~ 219 (434)
+.+|.| |.|.|-...... ++.++.++++.. .+.+. +...+++|+|+|+||..+-.+|.+-.+.
T Consensus 236 ia~Dl~-G~G~S~~p~~~~---ytl~~~a~~l~~---~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~Pe~------- 298 (481)
T PLN03087 236 FAVDLL-GFGRSPKPADSL---YTLREHLEMIER---SVLER---YKVKSFHIVAHSLGCILALALAVKHPGA------- 298 (481)
T ss_pred EEECCC-CCCCCcCCCCCc---CCHHHHHHHHHH---HHHHH---cCCCCEEEEEECHHHHHHHHHHHhChHh-------
Confidence 999999 999884221111 245555555531 23332 3346899999999999998888764432
Q ss_pred eeeeeeEecCC
Q 013879 220 IDLKGILLGNP 230 (434)
Q Consensus 220 inLkGi~IGNg 230 (434)
++++++.++
T Consensus 299 --V~~LVLi~~ 307 (481)
T PLN03087 299 --VKSLTLLAP 307 (481)
T ss_pred --ccEEEEECC
Confidence 788888776
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.70 E-value=0.00024 Score=71.44 Aligned_cols=113 Identities=19% Similarity=0.171 Sum_probs=74.1
Q ss_pred eeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCcc
Q 013879 75 RALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSN 154 (434)
Q Consensus 75 ~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~ 154 (434)
..++|. +..+.+.|.||++||.+|++.. +..+.+ .|. +..+++-+|.| |.|.|-..
T Consensus 119 ~~i~~~----~~g~~~~~~vl~~HG~~~~~~~-~~~~~~-----------~l~-------~~~~v~~~d~~-g~G~s~~~ 174 (371)
T PRK14875 119 RTVRYL----RLGEGDGTPVVLIHGFGGDLNN-WLFNHA-----------ALA-------AGRPVIALDLP-GHGASSKA 174 (371)
T ss_pred cEEEEe----cccCCCCCeEEEECCCCCccch-HHHHHH-----------HHh-------cCCEEEEEcCC-CCCCCCCC
Confidence 456554 2233456899999999888777 555442 121 22689999998 99988322
Q ss_pred CCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 155 TTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 155 ~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
.. ..+.++.++++..+++. +...+++|.|+|+||..+..+|.+-.+ .++++++.++.
T Consensus 175 ~~----~~~~~~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~~~---------~v~~lv~~~~~ 231 (371)
T PRK14875 175 VG----AGSLDELAAAVLAFLDA-------LGIERAHLVGHSMGGAVALRLAARAPQ---------RVASLTLIAPA 231 (371)
T ss_pred CC----CCCHHHHHHHHHHHHHh-------cCCccEEEEeechHHHHHHHHHHhCch---------heeEEEEECcC
Confidence 11 12566666666665542 334579999999999999888865322 27777776654
No 38
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.69 E-value=0.00025 Score=71.68 Aligned_cols=127 Identities=15% Similarity=0.088 Sum_probs=78.7
Q ss_pred EEEEEeecCCCe-eEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEe
Q 013879 64 AGYVTVNEHNGR-ALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFL 142 (434)
Q Consensus 64 sGy~~v~~~~~~-~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~i 142 (434)
..++..+ +. +++|.-..+.....+.|.||.|||.++.+.. +..+.+ .| .+...++.+
T Consensus 63 ~~~~~~~---g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~-w~~~~~-----------~L-------~~~~~via~ 120 (360)
T PLN02679 63 CKKWKWK---GEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPH-WRRNIG-----------VL-------AKNYTVYAI 120 (360)
T ss_pred CceEEEC---CceeEEEEEecCcccCCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hcCCEEEEE
Confidence 4455553 23 6776633211001134788999999888877 654431 11 234699999
Q ss_pred eCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeee
Q 013879 143 ESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDL 222 (434)
Q Consensus 143 DqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inL 222 (434)
|.| |.|.|-...... ++.+..++++.++|+. +...+++|+|+|+||..+-.+|.+- ... .+
T Consensus 121 Dl~-G~G~S~~~~~~~---~~~~~~a~~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~--~P~------rV 181 (360)
T PLN02679 121 DLL-GFGASDKPPGFS---YTMETWAELILDFLEE-------VVQKPTVLIGNSVGSLACVIAASES--TRD------LV 181 (360)
T ss_pred CCC-CCCCCCCCCCcc---ccHHHHHHHHHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhc--Chh------hc
Confidence 999 999984322112 2567778887777763 2235899999999997655554321 111 28
Q ss_pred eeeEecCCC
Q 013879 223 KGILLGNPE 231 (434)
Q Consensus 223 kGi~IGNg~ 231 (434)
+|+++.|+.
T Consensus 182 ~~LVLi~~~ 190 (360)
T PLN02679 182 RGLVLLNCA 190 (360)
T ss_pred CEEEEECCc
Confidence 899988864
No 39
>PLN02965 Probable pheophorbidase
Probab=97.68 E-value=0.00016 Score=69.15 Aligned_cols=100 Identities=12% Similarity=0.176 Sum_probs=68.1
Q ss_pred EEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHH
Q 013879 94 VLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYT 173 (434)
Q Consensus 94 ~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~ 173 (434)
||.+||.++.+.. +-...+ .|. .+...++-+|.| |.|.|-...... ++.+..|+++.+
T Consensus 6 vvllHG~~~~~~~-w~~~~~-----------~L~------~~~~~via~Dl~-G~G~S~~~~~~~---~~~~~~a~dl~~ 63 (255)
T PLN02965 6 FVFVHGASHGAWC-WYKLAT-----------LLD------AAGFKSTCVDLT-GAGISLTDSNTV---SSSDQYNRPLFA 63 (255)
T ss_pred EEEECCCCCCcCc-HHHHHH-----------HHh------hCCceEEEecCC-cCCCCCCCcccc---CCHHHHHHHHHH
Confidence 8899998766655 433321 121 223589999999 999994222111 256777888777
Q ss_pred HHHHHHHHCCCCCC-CcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 174 FLHKWFLKFPSYRR-RTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 174 fl~~F~~~fp~~~~-~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
+|.. +.. ++++++|+|+||..+..+|.+..+. ++++++.|+.
T Consensus 64 ~l~~-------l~~~~~~~lvGhSmGG~ia~~~a~~~p~~---------v~~lvl~~~~ 106 (255)
T PLN02965 64 LLSD-------LPPDHKVILVGHSIGGGSVTEALCKFTDK---------ISMAIYVAAA 106 (255)
T ss_pred HHHh-------cCCCCCEEEEecCcchHHHHHHHHhCchh---------eeEEEEEccc
Confidence 7763 222 5899999999999988888754332 7888887764
No 40
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.67 E-value=0.00037 Score=71.97 Aligned_cols=130 Identities=17% Similarity=0.159 Sum_probs=76.2
Q ss_pred EEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChh--hhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEee
Q 013879 66 YVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCS--SVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLE 143 (434)
Q Consensus 66 y~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~s--s~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iD 143 (434)
.|.+....+..+.-+++... ..+..|+|| ++||.++. .. +..+.+ .+. .+-.++|-+|
T Consensus 170 ~v~i~~~~g~~l~g~l~~P~-~~~~~P~Vl-i~gG~~~~~~~~-~~~~~~-----------~La------~~Gy~vl~~D 229 (414)
T PRK05077 170 ELEFPIPGGGPITGFLHLPK-GDGPFPTVL-VCGGLDSLQTDY-YRLFRD-----------YLA------PRGIAMLTID 229 (414)
T ss_pred EEEEEcCCCcEEEEEEEECC-CCCCccEEE-EeCCcccchhhh-HHHHHH-----------HHH------hCCCEEEEEC
Confidence 44444333335655555433 335678887 55667653 23 322210 111 1225899999
Q ss_pred CCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeee
Q 013879 144 SPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLK 223 (434)
Q Consensus 144 qPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLk 223 (434)
.| |+|.|-... ... +..... ..+.+++...|.....++.++|+|+||.+++.+|..-.+ .++
T Consensus 230 ~p-G~G~s~~~~---~~~-d~~~~~----~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~---------ri~ 291 (414)
T PRK05077 230 MP-SVGFSSKWK---LTQ-DSSLLH----QAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP---------RLK 291 (414)
T ss_pred CC-CCCCCCCCC---ccc-cHHHHH----HHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc---------Cce
Confidence 99 999984321 111 222222 233445556666666789999999999999988854321 288
Q ss_pred eeEecCCCCC
Q 013879 224 GILLGNPETS 233 (434)
Q Consensus 224 Gi~IGNg~id 233 (434)
++++.+|.++
T Consensus 292 a~V~~~~~~~ 301 (414)
T PRK05077 292 AVACLGPVVH 301 (414)
T ss_pred EEEEECCccc
Confidence 8888887654
No 41
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.65 E-value=0.00059 Score=66.15 Aligned_cols=128 Identities=12% Similarity=0.108 Sum_probs=78.7
Q ss_pred CeeEEEEEEEecCCCCCCCEEEEECCCCCh---h-hhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcC
Q 013879 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGC---S-SVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVG 149 (434)
Q Consensus 74 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~---s-s~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~G 149 (434)
..++|.|+++... +...|+||++||-.+- + .+ +..+.+ .|. ..-.+++-+|.| |.|
T Consensus 9 ~g~~~~~~~~p~~-~~~~~~VlllHG~g~~~~~~~~~-~~~la~-----------~La------~~Gy~Vl~~Dl~-G~G 68 (266)
T TIGR03101 9 HGFRFCLYHPPVA-VGPRGVVIYLPPFAEEMNKSRRM-VALQAR-----------AFA------AGGFGVLQIDLY-GCG 68 (266)
T ss_pred CCcEEEEEecCCC-CCCceEEEEECCCcccccchhHH-HHHHHH-----------HHH------HCCCEEEEECCC-CCC
Confidence 3668888887643 3346899999985321 1 11 111110 111 123589999999 999
Q ss_pred cCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecC
Q 013879 150 FSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGN 229 (434)
Q Consensus 150 fSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGN 229 (434)
.|-.... .. +.+...+|+..+++ |++... ..+++|+|+|.||..+..+|.+..+ .++++++-+
T Consensus 69 ~S~g~~~-~~---~~~~~~~Dv~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~---------~v~~lVL~~ 131 (266)
T TIGR03101 69 DSAGDFA-AA---RWDVWKEDVAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAANPLAA---------KCNRLVLWQ 131 (266)
T ss_pred CCCCccc-cC---CHHHHHHHHHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHHHhCcc---------ccceEEEec
Confidence 8853321 11 33444555554433 344332 4689999999999998887755322 278899989
Q ss_pred CCCCchhhh
Q 013879 230 PETSTAEDW 238 (434)
Q Consensus 230 g~idp~~q~ 238 (434)
|.++.....
T Consensus 132 P~~~g~~~l 140 (266)
T TIGR03101 132 PVVSGKQQL 140 (266)
T ss_pred cccchHHHH
Confidence 988765443
No 42
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.65 E-value=0.00014 Score=69.21 Aligned_cols=95 Identities=14% Similarity=0.107 Sum_probs=65.6
Q ss_pred CEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHH
Q 013879 92 PLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDS 171 (434)
Q Consensus 92 Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~ 171 (434)
|.||.|+|.++++.. +-.+.+ . +.+..+++.+|.| |.|.|-.. .. .+.++.++++
T Consensus 14 ~~ivllHG~~~~~~~-w~~~~~-----------~-------L~~~~~vi~~Dl~-G~G~S~~~--~~---~~~~~~~~~l 68 (256)
T PRK10349 14 VHLVLLHGWGLNAEV-WRCIDE-----------E-------LSSHFTLHLVDLP-GFGRSRGF--GA---LSLADMAEAV 68 (256)
T ss_pred CeEEEECCCCCChhH-HHHHHH-----------H-------HhcCCEEEEecCC-CCCCCCCC--CC---CCHHHHHHHH
Confidence 569999998888877 654431 1 2355799999999 99998532 11 2455555554
Q ss_pred HHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 172 YTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 172 ~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
.+ +...+++++|+|+||..+..+|.+-.+ .++++++.|+.
T Consensus 69 ~~-----------~~~~~~~lvGhS~Gg~ia~~~a~~~p~---------~v~~lili~~~ 108 (256)
T PRK10349 69 LQ-----------QAPDKAIWLGWSLGGLVASQIALTHPE---------RVQALVTVASS 108 (256)
T ss_pred Hh-----------cCCCCeEEEEECHHHHHHHHHHHhChH---------hhheEEEecCc
Confidence 32 123579999999999999888864333 27888887763
No 43
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.49 E-value=0.00025 Score=65.46 Aligned_cols=96 Identities=16% Similarity=0.125 Sum_probs=63.4
Q ss_pred CCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHH
Q 013879 91 KPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAND 170 (434)
Q Consensus 91 ~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~ 170 (434)
.|.||++||.++.+.. +-.+.+ .+ .+..+++.+|.| |.|.|.... . .+.++.+++
T Consensus 4 ~~~iv~~HG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~d~~-G~G~s~~~~--~---~~~~~~~~~ 58 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEV-FRCLDE-----------EL-------SAHFTLHLVDLP-GHGRSRGFG--P---LSLADAAEA 58 (245)
T ss_pred CceEEEEcCCCCchhh-HHHHHH-----------hh-------ccCeEEEEecCC-cCccCCCCC--C---cCHHHHHHH
Confidence 4789999998666666 543321 12 234799999998 999884321 1 144555554
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 171 ~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
+.+.+ ..++++.|+|+||..+..+|.+-.+. ++++++.++.
T Consensus 59 ~~~~~-----------~~~~~lvG~S~Gg~~a~~~a~~~p~~---------v~~~il~~~~ 99 (245)
T TIGR01738 59 IAAQA-----------PDPAIWLGWSLGGLVALHIAATHPDR---------VRALVTVASS 99 (245)
T ss_pred HHHhC-----------CCCeEEEEEcHHHHHHHHHHHHCHHh---------hheeeEecCC
Confidence 43221 25899999999999988888654432 7788877664
No 44
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.49 E-value=0.00021 Score=77.57 Aligned_cols=139 Identities=19% Similarity=0.318 Sum_probs=85.8
Q ss_pred EEEeecCCCeeEEEEEEEecC-CC-CCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEee
Q 013879 66 YVTVNEHNGRALFYWFYEAMT-RP-QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLE 143 (434)
Q Consensus 66 y~~v~~~~~~~lfy~f~es~~-~~-~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iD 143 (434)
++.+....|..+..|++...+ ++ +..|+|++++||| +++ .|. ..... -..=+.+-+.|++++
T Consensus 367 ~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~-------~~~~~------~q~~~~~G~~V~~~n 430 (620)
T COG1506 367 PVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY-------SFNPE------IQVLASAGYAVLAPN 430 (620)
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc-------ccchh------hHHHhcCCeEEEEeC
Confidence 334433346789999887653 22 2359999999999 555 341 11100 111234567899998
Q ss_pred CCCC-cCcCC--ccCCC-CCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCce
Q 013879 144 SPIG-VGFSY--SNTTN-DYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLY 219 (434)
Q Consensus 144 qPvg-~GfSy--~~~~~-~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~ 219 (434)
|-| +||+. ..... ++ . ....+|+.+++. |+...|.....++.|+|.||||...-.++.+-.
T Consensus 431 -~RGS~GyG~~F~~~~~~~~---g-~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~--------- 495 (620)
T COG1506 431 -YRGSTGYGREFADAIRGDW---G-GVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP--------- 495 (620)
T ss_pred -CCCCCccHHHHHHhhhhcc---C-CccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc---------
Confidence 555 44432 11111 11 1 234577888888 888999887788999999999976554443221
Q ss_pred eeeeeeEecCCCCCchh
Q 013879 220 IDLKGILLGNPETSTAE 236 (434)
Q Consensus 220 inLkGi~IGNg~idp~~ 236 (434)
-++..+...|.+|...
T Consensus 496 -~f~a~~~~~~~~~~~~ 511 (620)
T COG1506 496 -RFKAAVAVAGGVDWLL 511 (620)
T ss_pred -hhheEEeccCcchhhh
Confidence 2777777777776654
No 45
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.48 E-value=0.00057 Score=68.55 Aligned_cols=76 Identities=13% Similarity=0.075 Sum_probs=54.2
Q ss_pred cCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcC
Q 013879 135 KEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNK 214 (434)
Q Consensus 135 ~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~ 214 (434)
+...+|.+|.| |.|-|. ...+ +.+..|+++.++|+.. .. ++.+.|+|+|+||..+-.+|.+-.+.
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~---~~~~---~~~~~a~dl~~ll~~l-----~l-~~~~~lvG~SmGG~vA~~~A~~~P~~-- 162 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL---DVPI---DTADQADAIALLLDAL-----GI-ARLHAFVGYSYGALVGLQFASRHPAR-- 162 (343)
T ss_pred cccEEEEEeCC-CCCCCC---CCCC---CHHHHHHHHHHHHHHc-----CC-CcceEEEEECHHHHHHHHHHHHChHh--
Confidence 45799999999 776552 1122 4566788888777641 11 23467999999999999888766554
Q ss_pred CCCceeeeeeeEecCCCC
Q 013879 215 DPSLYIDLKGILLGNPET 232 (434)
Q Consensus 215 ~~~~~inLkGi~IGNg~i 232 (434)
++++++.++..
T Consensus 163 -------V~~LvLi~s~~ 173 (343)
T PRK08775 163 -------VRTLVVVSGAH 173 (343)
T ss_pred -------hheEEEECccc
Confidence 88999888754
No 46
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.33 E-value=0.00088 Score=62.37 Aligned_cols=117 Identities=15% Similarity=0.069 Sum_probs=60.1
Q ss_pred CCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcc---cCh
Q 013879 88 PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEM---LGD 164 (434)
Q Consensus 88 ~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~---~~~ 164 (434)
.+..|+||+|||+++..+. +..-. + +. .+. + ..-+.++..|.| |.|.+...- ..+.. ...
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~~~--~-~~------~~a-~----~~g~~Vv~Pd~~-g~~~~~~~~-~~~~~~~~~~~ 72 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVIDW--G-WK------AAA-D----RYGFVLVAPEQT-SYNSSNNCW-DWFFTHHRARG 72 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-Hhhhc--C-hH------HHH-H----hCCeEEEecCCc-CccccCCCC-CCCCccccCCC
Confidence 4578999999999877654 32100 0 00 010 0 122467777876 544321100 00000 000
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
.....++..+++...+.++ ....+++|+|+|.||..+-.+|.+-.+ .++++++..|.
T Consensus 73 ~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~p~---------~~~~~~~~~g~ 129 (212)
T TIGR01840 73 TGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTYPD---------VFAGGASNAGL 129 (212)
T ss_pred CccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhCch---------hheEEEeecCC
Confidence 1123334444444334442 344689999999999987666644211 16777776664
No 47
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.21 E-value=0.0025 Score=76.41 Aligned_cols=109 Identities=17% Similarity=0.243 Sum_probs=74.0
Q ss_pred CCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCC----CCccc
Q 013879 87 RPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTN----DYEML 162 (434)
Q Consensus 87 ~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~----~~~~~ 162 (434)
+.++.|.||+|||.+|++.. +..+.+ .+ .+..+++.+|.| |.|.|...... .....
T Consensus 1367 ~~~~~~~vVllHG~~~s~~~-w~~~~~-----------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~~ 1426 (1655)
T PLN02980 1367 QNAEGSVVLFLHGFLGTGED-WIPIMK-----------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQTEPTL 1426 (1655)
T ss_pred CCCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEcCC-CCCCCCCccccccccccccC
Confidence 34567899999999998877 554431 12 233689999999 99988543210 00112
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 163 ~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
+.+..|+++..+++. +...+++|+|+|+||..+-.+|.+..+. ++++++.+|.
T Consensus 1427 si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~~---------V~~lVlis~~ 1479 (1655)
T PLN02980 1427 SVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSDK---------IEGAVIISGS 1479 (1655)
T ss_pred CHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChHh---------hCEEEEECCC
Confidence 566777777776653 2346899999999999988888654433 7788777663
No 48
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.19 E-value=0.00079 Score=64.39 Aligned_cols=108 Identities=20% Similarity=0.327 Sum_probs=76.0
Q ss_pred CCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHH
Q 013879 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTA 168 (434)
Q Consensus 89 ~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a 168 (434)
..-|+++.+||| |.|.+.+..|. .++..+- ..-++-+|-. |.|-+-..++.+. +.+..+
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a-----------~el~s~~-----~~r~~a~DlR-gHGeTk~~~e~dl---S~eT~~ 130 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFA-----------SELKSKI-----RCRCLALDLR-GHGETKVENEDDL---SLETMS 130 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHH-----------HHHHhhc-----ceeEEEeecc-ccCccccCChhhc---CHHHHH
Confidence 355999999998 99998777775 1222111 1123778955 9999977766653 788899
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecC
Q 013879 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGN 229 (434)
Q Consensus 169 ~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGN 229 (434)
+|+...++++|..-| .+++|+|||.||-.+.+.|..= .--+|-|+.+.+
T Consensus 131 KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k--------~lpsl~Gl~viD 179 (343)
T KOG2564|consen 131 KDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASK--------TLPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhh--------hchhhhceEEEE
Confidence 999999998874333 4699999999998875555321 123478887754
No 49
>PRK05855 short chain dehydrogenase; Validated
Probab=97.18 E-value=0.0016 Score=69.45 Aligned_cols=101 Identities=16% Similarity=0.172 Sum_probs=68.1
Q ss_pred CeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCc
Q 013879 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (434)
Q Consensus 74 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~ 153 (434)
+..+.|+-+ .+.+.|.||.+||.++.+.. +..+.+ .+ .+..+++.+|.| |.|.|..
T Consensus 12 g~~l~~~~~----g~~~~~~ivllHG~~~~~~~-w~~~~~-----------~L-------~~~~~Vi~~D~~-G~G~S~~ 67 (582)
T PRK05855 12 GVRLAVYEW----GDPDRPTVVLVHGYPDNHEV-WDGVAP-----------LL-------ADRFRVVAYDVR-GAGRSSA 67 (582)
T ss_pred CEEEEEEEc----CCCCCCeEEEEcCCCchHHH-HHHHHH-----------Hh-------hcceEEEEecCC-CCCCCCC
Confidence 467777643 23347899999999877776 554432 12 234689999999 9999964
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHH
Q 013879 154 NTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (434)
Q Consensus 154 ~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a 206 (434)
..... ..+.+..++++..+++.. .+ ..+++|+|+|+||..+-.++
T Consensus 68 ~~~~~--~~~~~~~a~dl~~~i~~l---~~---~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 68 PKRTA--AYTLARLADDFAAVIDAV---SP---DRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred CCccc--ccCHHHHHHHHHHHHHHh---CC---CCcEEEEecChHHHHHHHHH
Confidence 33211 126778888988888752 11 35799999999995544343
No 50
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.17 E-value=0.0057 Score=59.39 Aligned_cols=42 Identities=17% Similarity=0.087 Sum_probs=31.6
Q ss_pred CCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 185 YRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 185 ~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
....+++|+|+|+||..+-.+|.+-.+ .+++++..+|+.++.
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~---------~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPD---------RFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcc---------cceEEEEECCccCcc
Confidence 445679999999999877777754322 178999999998764
No 51
>PRK10566 esterase; Provisional
Probab=97.14 E-value=0.0026 Score=60.26 Aligned_cols=111 Identities=14% Similarity=0.049 Sum_probs=63.2
Q ss_pred EEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCC
Q 013879 78 FYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTN 157 (434)
Q Consensus 78 fy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~ 157 (434)
+|.++++...++..|+||++||++|.... +..+.. .+.. +-.+++.+|.| |.|-|+.....
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~-~~~~~~-----------~l~~------~G~~v~~~d~~-g~G~~~~~~~~ 74 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLV-YSYFAV-----------ALAQ------AGFRVIMPDAP-MHGARFSGDEA 74 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccch-HHHHHH-----------HHHh------CCCEEEEecCC-cccccCCCccc
Confidence 34444443223457999999999887655 433220 1211 22589999988 88866532211
Q ss_pred CCcc--c-ChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHH
Q 013879 158 DYEM--L-GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTEL 208 (434)
Q Consensus 158 ~~~~--~-~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~ 208 (434)
.... . ......+++..++ .++...+.....+++|+|+|+||..+..++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 75 RRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred cchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 1000 0 0112334444433 34444444556789999999999998877643
No 52
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.11 E-value=0.0033 Score=62.01 Aligned_cols=136 Identities=19% Similarity=0.198 Sum_probs=90.2
Q ss_pred EEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEee
Q 013879 64 AGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLE 143 (434)
Q Consensus 64 sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iD 143 (434)
.|+.... .+..++|+.+++.+.+. .+|+.+||.=.++.- +-.+.+ .+..+- +.++=+|
T Consensus 11 ~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~-----------~l~~~G------~~V~~~D 68 (298)
T COG2267 11 EGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELAD-----------DLAARG------FDVYALD 68 (298)
T ss_pred cceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHH-----------HHHhCC------CEEEEec
Confidence 4444433 35789999887754443 799999998666665 443331 233232 4889999
Q ss_pred CCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeee
Q 013879 144 SPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLK 223 (434)
Q Consensus 144 qPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLk 223 (434)
+| |.|-|.- ....... +-++...|+..|++..-..+| ..|+||+|||.||-.+...+..-. -+++
T Consensus 69 ~R-GhG~S~r-~~rg~~~-~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~---------~~i~ 133 (298)
T COG2267 69 LR-GHGRSPR-GQRGHVD-SFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP---------PRID 133 (298)
T ss_pred CC-CCCCCCC-CCcCCch-hHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC---------cccc
Confidence 99 9999962 1222221 345555666666665444344 679999999999998777765543 3499
Q ss_pred eeEecCCCCCchh
Q 013879 224 GILLGNPETSTAE 236 (434)
Q Consensus 224 Gi~IGNg~idp~~ 236 (434)
|+++-+|++....
T Consensus 134 ~~vLssP~~~l~~ 146 (298)
T COG2267 134 GLVLSSPALGLGG 146 (298)
T ss_pred EEEEECccccCCh
Confidence 9999999887653
No 53
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.05 E-value=0.0064 Score=59.01 Aligned_cols=114 Identities=19% Similarity=0.196 Sum_probs=76.8
Q ss_pred CCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCC
Q 013879 73 NGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSY 152 (434)
Q Consensus 73 ~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy 152 (434)
.|..||.-.......++.+-+|+.++|.=+-+|..+--+.. .|..+. .-+--+|++ |.|.|-
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~-----------~l~~~g------~~v~a~D~~-GhG~Sd 97 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAK-----------RLAKSG------FAVYAIDYE-GHGRSD 97 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHH-----------HHHhCC------CeEEEeecc-CCCcCC
Confidence 35788886555544457778999999975555331322220 122222 256779998 999995
Q ss_pred ccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHH
Q 013879 153 SNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTEL 208 (434)
Q Consensus 153 ~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~ 208 (434)
+. ..+.. +.+.+.+|+..|+..+- ..++++..|.|++|||.||-.+-.++.+
T Consensus 98 Gl--~~yi~-~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k 149 (313)
T KOG1455|consen 98 GL--HAYVP-SFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK 149 (313)
T ss_pred CC--cccCC-cHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh
Confidence 33 33443 78888888888877653 4568889999999999999877766655
No 54
>PRK07581 hypothetical protein; Validated
Probab=97.02 E-value=0.0033 Score=62.76 Aligned_cols=130 Identities=11% Similarity=0.014 Sum_probs=72.6
Q ss_pred CeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCc
Q 013879 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (434)
Q Consensus 74 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~ 153 (434)
+.+++|--+.. ..+...|+||.++|++|.+.+ +......||- +. .+...+|-+|.| |.|.|-.
T Consensus 25 ~~~l~y~~~G~-~~~~~~~~vll~~~~~~~~~~-~~~~~~~~~~--------l~------~~~~~vi~~D~~-G~G~S~~ 87 (339)
T PRK07581 25 DARLAYKTYGT-LNAAKDNAILYPTWYSGTHQD-NEWLIGPGRA--------LD------PEKYFIIIPNMF-GNGLSSS 87 (339)
T ss_pred CceEEEEecCc-cCCCCCCEEEEeCCCCCCccc-chhhccCCCc--------cC------cCceEEEEecCC-CCCCCCC
Confidence 35677664332 123456888887766555444 3221111111 11 235689999999 9999853
Q ss_pred cCCC--CCcc--cChHHHHHHHHHHHHHHHHHCCCCCCCc-EEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEec
Q 013879 154 NTTN--DYEM--LGDDFTANDSYTFLHKWFLKFPSYRRRT-FYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLG 228 (434)
Q Consensus 154 ~~~~--~~~~--~~~~~~a~~~~~fl~~F~~~fp~~~~~~-~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IG 228 (434)
.... .+.. ......++++......+.+ ++.-.+ .+|+|+|+||..+-.+|.+-.+. ++++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~lgi~~~~~lvG~S~GG~va~~~a~~~P~~---------V~~Lvli 155 (339)
T PRK07581 88 PSNTPAPFNAARFPHVTIYDNVRAQHRLLTE---KFGIERLALVVGWSMGAQQTYHWAVRYPDM---------VERAAPI 155 (339)
T ss_pred CCCCCCCCCCCCCCceeHHHHHHHHHHHHHH---HhCCCceEEEEEeCHHHHHHHHHHHHCHHH---------Hhhheee
Confidence 2211 1110 0111234444432222222 122346 57999999999999999887665 7777777
Q ss_pred CCCC
Q 013879 229 NPET 232 (434)
Q Consensus 229 Ng~i 232 (434)
++..
T Consensus 156 ~~~~ 159 (339)
T PRK07581 156 AGTA 159 (339)
T ss_pred ecCC
Confidence 6653
No 55
>PLN02872 triacylglycerol lipase
Probab=96.95 E-value=0.0038 Score=63.98 Aligned_cols=125 Identities=16% Similarity=0.108 Sum_probs=69.1
Q ss_pred ceeEEEEEEeecCCCeeEEEEEEEecC---CCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccC
Q 013879 60 FRHYAGYVTVNEHNGRALFYWFYEAMT---RPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKE 136 (434)
Q Consensus 60 ~~~~sGy~~v~~~~~~~lfy~f~es~~---~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~ 136 (434)
+..+.-+++..+ |-.|-.+-+...+ .+...|.|+.+||..++|.. +..- +|-+-- ...|. .+-
T Consensus 42 y~~e~h~v~T~D--Gy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~-w~~~---~~~~sl--a~~La------~~G 107 (395)
T PLN02872 42 YSCTEHTIQTKD--GYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDA-WFLN---SPEQSL--GFILA------DHG 107 (395)
T ss_pred CCceEEEEECCC--CcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccc-eeec---Ccccch--HHHHH------hCC
Confidence 345566676543 2334444333221 22457899999999877776 4311 220000 00011 112
Q ss_pred cceeEeeCCCCcCcCCccCC-----CCCcccChHHHH-HHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccch
Q 013879 137 ANMLFLESPIGVGFSYSNTT-----NDYEMLGDDFTA-NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIP 203 (434)
Q Consensus 137 ~n~l~iDqPvg~GfSy~~~~-----~~~~~~~~~~~a-~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp 203 (434)
..+.-.|.+ |.|+|+.... ..+...+.++.| .|+-++++...+.. ..+++++|+|.||..+-
T Consensus 108 ydV~l~n~R-G~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 108 FDVWVGNVR-GTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTIMSL 175 (395)
T ss_pred CCccccccc-ccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc----CCceEEEEECHHHHHHH
Confidence 367777877 8888865321 112122555666 67777777655432 35899999999996553
No 56
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.94 E-value=0.006 Score=55.67 Aligned_cols=104 Identities=24% Similarity=0.287 Sum_probs=65.0
Q ss_pred CCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHH
Q 013879 91 KPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAND 170 (434)
Q Consensus 91 ~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~ 170 (434)
.|.++++||+|+++.. +....+ .+..... + .+++.+|+| |.|.|. .. .. +....+.+
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~~-----------~~~~~~~---~-~~~~~~d~~-g~g~s~--~~-~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVFK-----------VLPALAA---R-YRVIAPDLR-GHGRSD--PA-GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHHH-----------Hhhcccc---c-eEEEEeccc-CCCCCC--cc-cc---cHHHHHHH
Confidence 6799999999999888 544110 0111111 1 799999999 999995 11 11 22222444
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCC
Q 013879 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (434)
Q Consensus 171 ~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~id 233 (434)
+..++ +.. ...++++.|+|+||..+-.+|.+..+. ++++++.++...
T Consensus 78 ~~~~~----~~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~~---------~~~~v~~~~~~~ 124 (282)
T COG0596 78 LAALL----DAL---GLEKVVLVGHSMGGAVALALALRHPDR---------VRGLVLIGPAPP 124 (282)
T ss_pred HHHHH----HHh---CCCceEEEEecccHHHHHHHHHhcchh---------hheeeEecCCCC
Confidence 44444 322 233499999999987777777665542 777777776554
No 57
>PLN02511 hydrolase
Probab=96.90 E-value=0.0037 Score=63.94 Aligned_cols=120 Identities=18% Similarity=0.182 Sum_probs=72.8
Q ss_pred eEEEEEEeecCCCeeEEEEEEEe--cCCCCCCCEEEEECCCCChhhhhh-hhhhccCCeeEcCCCCccccCCCCcccCcc
Q 013879 62 HYAGYVTVNEHNGRALFYWFYEA--MTRPQEKPLVLWLNGGPGCSSVGY-GATQEIGPFLVDTDGRGLQFNPYAWNKEAN 138 (434)
Q Consensus 62 ~~sGy~~v~~~~~~~lfy~f~es--~~~~~~~Pl~lwlnGGPG~ss~~~-g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n 138 (434)
...-++...+ |..+.+..+.. ...+.+.|+||.|+|..|+|...+ -.+.. .+ ..+-.+
T Consensus 71 ~~re~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~-----------~~------~~~g~~ 131 (388)
T PLN02511 71 YRRECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL-----------RA------RSKGWR 131 (388)
T ss_pred eeEEEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH-----------HH------HHCCCE
Confidence 3455666643 45565533322 123567899999999998864211 11110 01 123458
Q ss_pred eeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHH
Q 013879 139 MLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTEL 208 (434)
Q Consensus 139 ~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~ 208 (434)
++-+|.| |.|-|-......+ ....++|+.++++..-.++| +.+++++|+|.||..+-.++.+
T Consensus 132 vv~~d~r-G~G~s~~~~~~~~----~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 132 VVVFNSR-GCADSPVTTPQFY----SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred EEEEecC-CCCCCCCCCcCEE----cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh
Confidence 9999998 9988843222111 12345666666666555666 5689999999999987666544
No 58
>PRK10985 putative hydrolase; Provisional
Probab=96.84 E-value=0.011 Score=58.81 Aligned_cols=137 Identities=16% Similarity=0.134 Sum_probs=68.5
Q ss_pred EEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhh-hhhccCCeeEcCCCCccccCCCCcccCcceeEe
Q 013879 64 AGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYG-ATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFL 142 (434)
Q Consensus 64 sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g-~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~i 142 (434)
.-.++..+ |..+.+++.+....+.++|+||.+||.+|++...+. .+.+ .+... -.+++-+
T Consensus 33 ~~~~~~~d--g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~-----------~l~~~------G~~v~~~ 93 (324)
T PRK10985 33 WQRLELPD--GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE-----------AAQKR------GWLGVVM 93 (324)
T ss_pred eeEEECCC--CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH-----------HHHHC------CCEEEEE
Confidence 33455543 344444433322334568999999999987532111 1110 12211 2367778
Q ss_pred eCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeee
Q 013879 143 ESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDL 222 (434)
Q Consensus 143 DqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inL 222 (434)
|.+ |.|=|-......+.. .. .+|+..+++..-+.++ ..+++++|+|.||..+-..+.+-.+ ...+
T Consensus 94 d~r-G~g~~~~~~~~~~~~-~~---~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~~~~-------~~~~ 158 (324)
T PRK10985 94 HFR-GCSGEPNRLHRIYHS-GE---TEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAKEGD-------DLPL 158 (324)
T ss_pred eCC-CCCCCccCCcceECC-Cc---hHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHhhCC-------CCCc
Confidence 877 766442111111111 11 2333333332223344 4689999999999876655544221 1225
Q ss_pred eeeEecCCCCCc
Q 013879 223 KGILLGNPETST 234 (434)
Q Consensus 223 kGi~IGNg~idp 234 (434)
+++++.++-.+.
T Consensus 159 ~~~v~i~~p~~~ 170 (324)
T PRK10985 159 DAAVIVSAPLML 170 (324)
T ss_pred cEEEEEcCCCCH
Confidence 555554554443
No 59
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.83 E-value=0.0094 Score=60.71 Aligned_cols=136 Identities=15% Similarity=0.069 Sum_probs=77.1
Q ss_pred CeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhh--ccCCeeEcCCCCccc-cCCCCcccCcceeEeeCCCC-cC
Q 013879 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQ--EIGPFLVDTDGRGLQ-FNPYAWNKEANMLFLESPIG-VG 149 (434)
Q Consensus 74 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~--E~GP~~v~~~~~~l~-~n~~sW~~~~n~l~iDqPvg-~G 149 (434)
+.+++|.-+.. -+++..|.||.+||-+|.+.. +.... +.+|=... .+. ....--.+...||-+|.| | .|
T Consensus 32 ~~~~~y~~~G~-~~~~~~p~vvl~HG~~~~~~~-~~~~~~~~~~~~~w~----~~~~~~~~l~~~~~~vi~~Dl~-G~~~ 104 (379)
T PRK00175 32 PVELAYETYGT-LNADRSNAVLICHALTGDHHV-AGPHSPDDPKPGWWD----NMVGPGKPIDTDRYFVICSNVL-GGCK 104 (379)
T ss_pred CceEEEEeccc-cCCCCCCEEEEeCCcCCchhh-cccccccCCCCcchh----hccCCCCccCccceEEEeccCC-CCCC
Confidence 46788875431 123446999999999988765 32110 00000000 000 000000234689999988 5 34
Q ss_pred cCCccCC------C----CCcccChHHHHHHHHHHHHHHHHHCCCCCCCc-EEEEeeccCcccchHHHHHHHhhcCCCCc
Q 013879 150 FSYSNTT------N----DYEMLGDDFTANDSYTFLHKWFLKFPSYRRRT-FYIAGESYAGRYIPELTELIHDRNKDPSL 218 (434)
Q Consensus 150 fSy~~~~------~----~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~-~~i~GESYgG~yvp~~a~~i~~~n~~~~~ 218 (434)
.|..... . ++...+.+..++++.++|+. +.-.+ .+|+|+|+||..+-.+|.+-.+.
T Consensus 105 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~------ 171 (379)
T PRK00175 105 GSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDA-------LGITRLAAVVGGSMGGMQALEWAIDYPDR------ 171 (379)
T ss_pred CCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHH-------hCCCCceEEEEECHHHHHHHHHHHhChHh------
Confidence 4532111 0 01123566677777666653 22345 58999999999988888775543
Q ss_pred eeeeeeeEecCCCC
Q 013879 219 YIDLKGILLGNPET 232 (434)
Q Consensus 219 ~inLkGi~IGNg~i 232 (434)
++++++.|+..
T Consensus 172 ---v~~lvl~~~~~ 182 (379)
T PRK00175 172 ---VRSALVIASSA 182 (379)
T ss_pred ---hhEEEEECCCc
Confidence 88999988643
No 60
>PLN02442 S-formylglutathione hydrolase
Probab=96.77 E-value=0.005 Score=60.18 Aligned_cols=57 Identities=16% Similarity=0.077 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 167 ~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
..+++...+..++.. ....+++|+|+|+||+-+-.+|.+-.+ .+++++..+|..|+.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p~---------~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNPD---------KYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCch---------hEEEEEEECCccCcc
Confidence 344555566665543 345679999999999877666654222 178899999988864
No 61
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=96.76 E-value=0.0019 Score=59.45 Aligned_cols=79 Identities=19% Similarity=0.276 Sum_probs=51.8
Q ss_pred cceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCC
Q 013879 137 ANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDP 216 (434)
Q Consensus 137 ~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 216 (434)
++++-+|+| |.|+|....... ..+-...++.+.+..+.+..+ ..+++++|+|+||..+-.+|..-.+
T Consensus 1 f~vi~~d~r-G~g~S~~~~~~~----~~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~----- 67 (230)
T PF00561_consen 1 FDVILFDLR-GFGYSSPHWDPD----FPDYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE----- 67 (230)
T ss_dssp EEEEEEECT-TSTTSSSCCGSG----SCTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG-----
T ss_pred CEEEEEeCC-CCCCCCCCccCC----cccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch-----
Confidence 367889988 999996300011 112223444455555555544 3459999999999998888866544
Q ss_pred CceeeeeeeEecCCCC
Q 013879 217 SLYIDLKGILLGNPET 232 (434)
Q Consensus 217 ~~~inLkGi~IGNg~i 232 (434)
.++++++.++..
T Consensus 68 ----~v~~lvl~~~~~ 79 (230)
T PF00561_consen 68 ----RVKKLVLISPPP 79 (230)
T ss_dssp ----GEEEEEEESESS
T ss_pred ----hhcCcEEEeeec
Confidence 389998888764
No 62
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=96.69 E-value=0.015 Score=56.41 Aligned_cols=79 Identities=19% Similarity=0.134 Sum_probs=54.2
Q ss_pred cceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCC
Q 013879 137 ANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDP 216 (434)
Q Consensus 137 ~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 216 (434)
.+++-+|.| |.|-|.... . +.+....|+.++++.+-+..|.+ .+++++|+|.||..+-.+|.. ..
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~---~---~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~----~~-- 122 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN---L---GFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA----DL-- 122 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC---C---CHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh----CC--
Confidence 689999998 999885321 1 34455667777777655555544 369999999999765555421 11
Q ss_pred CceeeeeeeEecCCCCCc
Q 013879 217 SLYIDLKGILLGNPETST 234 (434)
Q Consensus 217 ~~~inLkGi~IGNg~idp 234 (434)
.++|+++.||++..
T Consensus 123 ----~v~~lil~~p~~~~ 136 (274)
T TIGR03100 123 ----RVAGLVLLNPWVRT 136 (274)
T ss_pred ----CccEEEEECCccCC
Confidence 39999999998653
No 63
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=96.66 E-value=0.016 Score=58.02 Aligned_cols=153 Identities=17% Similarity=0.151 Sum_probs=86.4
Q ss_pred CCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhh---c----cCCeeEcCCCCccccC---CCCc-ccCcceeE
Q 013879 73 NGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQ---E----IGPFLVDTDGRGLQFN---PYAW-NKEANMLF 141 (434)
Q Consensus 73 ~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~---E----~GP~~v~~~~~~l~~n---~~sW-~~~~n~l~ 141 (434)
.|..+++...+.. +.+.+|+.+||==+-+.. -.+. | -+|+.|+.+-+ ..++ -..+ .+-..++-
T Consensus 6 ~g~~l~~~~~~~~---~~kg~v~i~HG~~eh~~~--~~~~~~~~~~~~~~~~~~~~~ry-~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 6 DGLLLKTYSWIVK---NAIGIIVLIHGLKSHLRL--QFLKINAKIVNNDRAVLIDTDNY-YIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred CCCeEEEeeeecc---CCeEEEEEECCCchhhhh--hhhhcCcccCCCCeeEEEcCCcc-eEeeHHHHHHHHHCCCcEEE
Confidence 3566777766543 245799999985333321 1111 1 12444432210 0001 0112 33478999
Q ss_pred eeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHH--------C--------CCCC-CCcEEEEeeccCcccchH
Q 013879 142 LESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLK--------F--------PSYR-RRTFYIAGESYAGRYIPE 204 (434)
Q Consensus 142 iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~--------f--------p~~~-~~~~~i~GESYgG~yvp~ 204 (434)
+|.| |.|.|-+.........+-+..++|+..+++..-+. + .++. +.|++|+|||.||..+..
T Consensus 80 ~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 80 LDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred eccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 9998 99998654221111125677788888888765331 0 0232 578999999999998887
Q ss_pred HHHHHHhhcCCCCceeeeeeeEecCCCCC
Q 013879 205 LTELIHDRNKDPSLYIDLKGILLGNPETS 233 (434)
Q Consensus 205 ~a~~i~~~n~~~~~~inLkGi~IGNg~id 233 (434)
++.+..+.... ..+..++|+++-.|++.
T Consensus 159 ~~~~~~~~~~~-~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 159 LLELLGKSNEN-NDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHHhcccccc-ccccccceEEEeccceE
Confidence 77655332100 01245899988788764
No 64
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=96.56 E-value=0.024 Score=55.72 Aligned_cols=138 Identities=18% Similarity=0.237 Sum_probs=93.1
Q ss_pred ceeEEEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcce
Q 013879 60 FRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANM 139 (434)
Q Consensus 60 ~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~ 139 (434)
.....+|++++. +++++.|. .+++.|+++.|+|=|=.+=. +=.-. ..|.. +...+
T Consensus 20 ~~~~hk~~~~~g-----I~~h~~e~--g~~~gP~illlHGfPe~wys-wr~q~-----------~~la~------~~~rv 74 (322)
T KOG4178|consen 20 SAISHKFVTYKG-----IRLHYVEG--GPGDGPIVLLLHGFPESWYS-WRHQI-----------PGLAS------RGYRV 74 (322)
T ss_pred hhcceeeEEEcc-----EEEEEEee--cCCCCCEEEEEccCCccchh-hhhhh-----------hhhhh------cceEE
Confidence 356678888752 77777765 78899999999999876644 21110 01211 12689
Q ss_pred eEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCce
Q 013879 140 LFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLY 219 (434)
Q Consensus 140 l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~ 219 (434)
+.+|.+ |.|+|-.... ...++....+.++..+|.. +...+++++||+||+..+=.+|..-.+..+. .
T Consensus 75 iA~Dlr-GyG~Sd~P~~--~~~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~~---l 141 (322)
T KOG4178|consen 75 IAPDLR-GYGFSDAPPH--ISEYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVDG---L 141 (322)
T ss_pred EecCCC-CCCCCCCCCC--cceeeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcce---E
Confidence 999999 9999954443 2223677888888877763 3356899999999999988888777665332 3
Q ss_pred eeeeeeEecCCCCCchh
Q 013879 220 IDLKGILLGNPETSTAE 236 (434)
Q Consensus 220 inLkGi~IGNg~idp~~ 236 (434)
+++++... |+..+|..
T Consensus 142 v~~nv~~~-~p~~~~~~ 157 (322)
T KOG4178|consen 142 VTLNVPFP-NPKLKPLD 157 (322)
T ss_pred EEecCCCC-Ccccchhh
Confidence 44444444 55555544
No 65
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.55 E-value=0.0036 Score=60.99 Aligned_cols=113 Identities=12% Similarity=0.152 Sum_probs=67.3
Q ss_pred CCCCCEEEEECCCCChh-hhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHH
Q 013879 88 PQEKPLVLWLNGGPGCS-SVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDF 166 (434)
Q Consensus 88 ~~~~Pl~lwlnGGPG~s-s~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~ 166 (434)
..+.|++|++||-.|.. .. +-. .+. +.+.-....|++.+|-+-+..-.|.. ...+.+.
T Consensus 33 ~~~~p~vilIHG~~~~~~~~-~~~--------------~l~-~~ll~~~~~nVi~vD~~~~~~~~y~~-----a~~~~~~ 91 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEES-WIS--------------DLR-KAYLSRGDYNVIVVDWGRGANPNYPQ-----AVNNTRV 91 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCc-HHH--------------HHH-HHHHhcCCCEEEEEECccccccChHH-----HHHhHHH
Confidence 34579999999977654 22 110 000 11111134799999976331111110 0114455
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 167 ~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
+++++..+|+...+.. .....+++|+|+|.||+.+-.+|.++.+ .++.|+..+|.
T Consensus 92 v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~---------~v~~iv~LDPa 146 (275)
T cd00707 92 VGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG---------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC---------ccceeEEecCC
Confidence 6677777777655542 2334689999999999999888876643 27788876654
No 66
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.30 E-value=0.013 Score=62.71 Aligned_cols=130 Identities=17% Similarity=0.157 Sum_probs=77.1
Q ss_pred CCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCc-ccCcceeEeeCCCCcCcC
Q 013879 73 NGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAW-NKEANMLFLESPIGVGFS 151 (434)
Q Consensus 73 ~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW-~~~~n~l~iDqPvg~GfS 151 (434)
.|..|+..++... +.+..|+||.++|--..+.. .... + .. ...-| .+-..++-+|.+ |.|.|
T Consensus 5 DG~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~-~~~~-~------------~~-~~~~l~~~Gy~vv~~D~R-G~g~S 67 (550)
T TIGR00976 5 DGTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGL-RWGL-D------------KT-EPAWFVAQGYAVVIQDTR-GRGAS 67 (550)
T ss_pred CCCEEEEEEEecC-CCCCCCEEEEecCCCCchhh-cccc-c------------cc-cHHHHHhCCcEEEEEecc-ccccC
Confidence 3567887666443 24467999999975332221 0000 0 00 00012 234689999987 99999
Q ss_pred CccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 152 YSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 152 y~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
-+.... . + ...++|+.++++ |+.+.| +.+.++.++|+||||..+-.+|.. .. -.||+++..+++
T Consensus 68 ~g~~~~-~---~-~~~~~D~~~~i~-~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~---~~------~~l~aiv~~~~~ 131 (550)
T TIGR00976 68 EGEFDL-L---G-SDEAADGYDLVD-WIAKQP-WCDGNVGMLGVSYLAVTQLLAAVL---QP------PALRAIAPQEGV 131 (550)
T ss_pred CCceEe-c---C-cccchHHHHHHH-HHHhCC-CCCCcEEEEEeChHHHHHHHHhcc---CC------CceeEEeecCcc
Confidence 543211 1 2 345566666555 555555 334689999999999775555532 11 239999999988
Q ss_pred CCch
Q 013879 232 TSTA 235 (434)
Q Consensus 232 idp~ 235 (434)
.|..
T Consensus 132 ~d~~ 135 (550)
T TIGR00976 132 WDLY 135 (550)
T ss_pred cchh
Confidence 7754
No 67
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.18 E-value=0.015 Score=60.17 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=53.0
Q ss_pred CcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCC
Q 013879 136 EANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD 215 (434)
Q Consensus 136 ~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~ 215 (434)
..|+|-+|-| |-|-|.-... .. +...+|+++.++|+...+.. .+.-.+++|.|+|.|||.+-.+|.+...
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a---~~-~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p~---- 142 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTS---AA-YTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTKH---- 142 (442)
T ss_pred CCEEEEEECC-CcCCCCCccc---cc-cHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCCc----
Confidence 4799999988 5553311111 11 44677788877776544333 2445689999999999988887754321
Q ss_pred CCceeeeeeeEecCCC
Q 013879 216 PSLYIDLKGILLGNPE 231 (434)
Q Consensus 216 ~~~~inLkGi~IGNg~ 231 (434)
.+.+|+..+|.
T Consensus 143 -----rV~rItgLDPA 153 (442)
T TIGR03230 143 -----KVNRITGLDPA 153 (442)
T ss_pred -----ceeEEEEEcCC
Confidence 27777777764
No 68
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=96.16 E-value=0.086 Score=48.98 Aligned_cols=122 Identities=19% Similarity=0.292 Sum_probs=80.8
Q ss_pred eeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCcc
Q 013879 75 RALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSN 154 (434)
Q Consensus 75 ~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~ 154 (434)
-.|.=|...+++ +.|.+|.++|--|- +|.+.- +.+ ... =+-..|++-++-. |.|-|-+.
T Consensus 65 vtL~a~~~~~E~---S~pTlLyfh~NAGN----mGhr~~------i~~--~fy-----~~l~mnv~ivsYR-GYG~S~Gs 123 (300)
T KOG4391|consen 65 VTLDAYLMLSES---SRPTLLYFHANAGN----MGHRLP------IAR--VFY-----VNLKMNVLIVSYR-GYGKSEGS 123 (300)
T ss_pred eeEeeeeecccC---CCceEEEEccCCCc----ccchhh------HHH--HHH-----HHcCceEEEEEee-ccccCCCC
Confidence 455555554443 78999999986543 344331 000 001 1234688999977 99999766
Q ss_pred CCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCc
Q 013879 155 TTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (434)
Q Consensus 155 ~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp 234 (434)
.... .....|+.+.+.| -.+|...+++++++|.|-||.-+-.+|++-.+. +.++++-|-+++-
T Consensus 124 psE~----GL~lDs~avldyl----~t~~~~dktkivlfGrSlGGAvai~lask~~~r---------i~~~ivENTF~SI 186 (300)
T KOG4391|consen 124 PSEE----GLKLDSEAVLDYL----MTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR---------ISAIIVENTFLSI 186 (300)
T ss_pred cccc----ceeccHHHHHHHH----hcCccCCcceEEEEecccCCeeEEEeeccchhh---------eeeeeeechhccc
Confidence 5432 1222233333333 478888899999999999999999999876654 8899999988765
No 69
>PLN00021 chlorophyllase
Probab=96.15 E-value=0.016 Score=57.53 Aligned_cols=115 Identities=14% Similarity=0.120 Sum_probs=66.8
Q ss_pred CCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHH
Q 013879 88 PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFT 167 (434)
Q Consensus 88 ~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~ 167 (434)
..+.|+|||+||+.+.... +..+.+ .+. +| -..++.+|.+ | ++... .. .+-+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~-y~~l~~-----------~La----s~--G~~VvapD~~-g--~~~~~---~~---~~i~d 101 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSF-YSQLLQ-----------HIA----SH--GFIVVAPQLY-T--LAGPD---GT---DEIKD 101 (313)
T ss_pred CCCCCEEEEECCCCCCccc-HHHHHH-----------HHH----hC--CCEEEEecCC-C--cCCCC---ch---hhHHH
Confidence 4568999999999776655 433321 111 11 2466777766 3 32111 11 12223
Q ss_pred HHHHHHHHHHHHHH-CC---CCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCC
Q 013879 168 ANDSYTFLHKWFLK-FP---SYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (434)
Q Consensus 168 a~~~~~fl~~F~~~-fp---~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~id 233 (434)
+.++..++.+-++. -| +....+++|+|||.||..+-.+|.+..+.. ....+++++..+++..
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~----~~~~v~ali~ldPv~g 167 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS----LPLKFSALIGLDPVDG 167 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc----cccceeeEEeeccccc
Confidence 45555555543322 12 233467999999999999888886554321 1245888888887654
No 70
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.02 E-value=0.038 Score=51.43 Aligned_cols=102 Identities=15% Similarity=0.203 Sum_probs=70.6
Q ss_pred EEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHH
Q 013879 93 LVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSY 172 (434)
Q Consensus 93 l~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~ 172 (434)
.|+++++|=|+++. |--|.. ...+. ..++..|+.| |-+ . .. ... .+.++.|+...
T Consensus 2 ~lf~~p~~gG~~~~-y~~la~------------~l~~~-----~~~v~~i~~~-~~~-~---~~-~~~-~si~~la~~y~ 56 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLAR------------ALPDD-----VIGVYGIEYP-GRG-D---DE-PPP-DSIEELASRYA 56 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHHH------------HHTTT-----EEEEEEECST-TSC-T---TS-HEE-SSHHHHHHHHH
T ss_pred eEEEEcCCccCHHH-HHHHHH------------hCCCC-----eEEEEEEecC-CCC-C---CC-CCC-CCHHHHHHHHH
Confidence 57889988776665 544431 11111 3678899988 665 1 11 112 27888888877
Q ss_pred HHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 173 TFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 173 ~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
+.|+. ..| ..|++|+|+|+||..+=.+|.++.++.. ..+.|++.++.
T Consensus 57 ~~I~~---~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~G~------~v~~l~liD~~ 103 (229)
T PF00975_consen 57 EAIRA---RQP---EGPYVLAGWSFGGILAFEMARQLEEAGE------EVSRLILIDSP 103 (229)
T ss_dssp HHHHH---HTS---SSSEEEEEETHHHHHHHHHHHHHHHTT-------SESEEEEESCS
T ss_pred HHhhh---hCC---CCCeeehccCccHHHHHHHHHHHHHhhh------ccCceEEecCC
Confidence 77763 455 3499999999999999999999988743 48889988865
No 71
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=95.89 E-value=0.062 Score=53.98 Aligned_cols=135 Identities=15% Similarity=0.114 Sum_probs=74.1
Q ss_pred CeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccC-CeeEcCCCCccc-cCCCCcccCcceeEeeCCCC--cC
Q 013879 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIG-PFLVDTDGRGLQ-FNPYAWNKEANMLFLESPIG--VG 149 (434)
Q Consensus 74 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~G-P~~v~~~~~~l~-~n~~sW~~~~n~l~iDqPvg--~G 149 (434)
+.+++|.-+... +.+..|.||.+||=.|.+-. .. ..+.+ |=... .+. ....--.+...|+-+|.| | .|
T Consensus 15 ~~~~~y~~~g~~-~~~~~~~vll~Hg~~~~~~~-~~-~~~~~~~~~w~----~~~~~~~~l~~~~~~vi~~D~~-G~~~g 86 (351)
T TIGR01392 15 DVRVAYETYGTL-NAERSNAVLVCHALTGDAHV-AG-YHDDGDPGWWD----DLIGPGRAIDTDRYFVVCSNVL-GGCYG 86 (351)
T ss_pred CceEEEEecccc-CCCCCCEEEEcCCcCcchhh-cc-cCCCCCCCchh----hccCCCCCcCCCceEEEEecCC-CCCCC
Confidence 467888755331 12345899999997775532 10 00000 00000 000 000111244689999998 7 45
Q ss_pred cCCccC--CCC------CcccChHHHHHHHHHHHHHHHHHCCCCCCCc-EEEEeeccCcccchHHHHHHHhhcCCCCcee
Q 013879 150 FSYSNT--TND------YEMLGDDFTANDSYTFLHKWFLKFPSYRRRT-FYIAGESYAGRYIPELTELIHDRNKDPSLYI 220 (434)
Q Consensus 150 fSy~~~--~~~------~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~-~~i~GESYgG~yvp~~a~~i~~~n~~~~~~i 220 (434)
-|-..+ ... ....+.++.++++..+++. +.-.+ ++|+|+|+||..+-.+|.+-.+.
T Consensus 87 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~-------- 151 (351)
T TIGR01392 87 STGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH-------LGIEQIAAVVGGSMGGMQALEWAIDYPER-------- 151 (351)
T ss_pred CCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH-------cCCCCceEEEEECHHHHHHHHHHHHChHh--------
Confidence 442110 000 1112566667777666653 22245 99999999999888888664433
Q ss_pred eeeeeEecCCCC
Q 013879 221 DLKGILLGNPET 232 (434)
Q Consensus 221 nLkGi~IGNg~i 232 (434)
++++++.++..
T Consensus 152 -v~~lvl~~~~~ 162 (351)
T TIGR01392 152 -VRAIVVLATSA 162 (351)
T ss_pred -hheEEEEccCC
Confidence 88888888753
No 72
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=95.65 E-value=0.1 Score=52.19 Aligned_cols=144 Identities=16% Similarity=0.183 Sum_probs=84.8
Q ss_pred EEEEEeecCCCeeEEEEEEEecCC-C-CCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcc-cCccee
Q 013879 64 AGYVTVNEHNGRALFYWFYEAMTR-P-QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWN-KEANML 140 (434)
Q Consensus 64 sGy~~v~~~~~~~lfy~f~es~~~-~-~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~-~~~n~l 140 (434)
+.-+.++ ....++-+.|..... + ..+|++||+|||=-|-+...- ....+--++. +.++.+
T Consensus 63 ~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~---------------~~y~~~~~~~a~~~~~v 125 (336)
T KOG1515|consen 63 SKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANS---------------PAYDSFCTRLAAELNCV 125 (336)
T ss_pred eeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCC---------------chhHHHHHHHHHHcCeE
Confidence 4444443 347799999987644 3 588999999999666432000 0000111121 344544
Q ss_pred EeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHH-HHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCce
Q 013879 141 FLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHK-WFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLY 219 (434)
Q Consensus 141 ~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~-F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~ 219 (434)
-| .++|=-..+ ..++. .-++.-..+.-+++. |....-... .++|+|.|-||..+-.+|.++.+.- -..
T Consensus 126 vv----SVdYRLAPE-h~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~---~~~ 194 (336)
T KOG1515|consen 126 VV----SVDYRLAPE-HPFPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK---LSK 194 (336)
T ss_pred EE----ecCcccCCC-CCCCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc---CCC
Confidence 43 233332221 22222 233333444455554 666554443 4999999999999999999998753 135
Q ss_pred eeeeeeEecCCCCCch
Q 013879 220 IDLKGILLGNPETSTA 235 (434)
Q Consensus 220 inLkGi~IGNg~idp~ 235 (434)
+.++|.++.-|++...
T Consensus 195 ~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 195 PKIKGQILIYPFFQGT 210 (336)
T ss_pred cceEEEEEEecccCCC
Confidence 7799999988876543
No 73
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.62 E-value=0.14 Score=49.76 Aligned_cols=146 Identities=17% Similarity=0.156 Sum_probs=82.5
Q ss_pred CeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcc-----eeEeeC----
Q 013879 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEAN-----MLFLES---- 144 (434)
Q Consensus 74 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n-----~l~iDq---- 144 (434)
+.+.-||++.-..-++.+||||.|||+=|..+- +- +-..|++.|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~~-------------------~~sg~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-QL-------------------HGTGWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHH-hh-------------------cccchhhhhcccCcEEECcCccccc
Confidence 466779998877678888999999998666544 21 2223444433 334331
Q ss_pred --CCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeee
Q 013879 145 --PIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDL 222 (434)
Q Consensus 145 --Pvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inL 222 (434)
|-+.|-++...+.. ...+.+..+.+.+.....+| ......+||+|-|-||..+-.++..-.+. +
T Consensus 104 wn~~~~~~~~~p~~~~----~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~p~~---------f 169 (312)
T COG3509 104 WNANGCGNWFGPADRR----RGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEYPDI---------F 169 (312)
T ss_pred cCCCcccccCCccccc----CCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcCccc---------c
Confidence 23444443222111 11122333333333333434 23346799999999999887777543322 7
Q ss_pred eeeEecCCCC-Cch-hhhhhHHHHHhhcccCCH
Q 013879 223 KGILLGNPET-STA-EDWQGLVDYAWSHAVVSD 253 (434)
Q Consensus 223 kGi~IGNg~i-dp~-~q~~s~~~~a~~~gli~~ 253 (434)
.++++..|.. +.. .....-.+.+..||..|+
T Consensus 170 aa~A~VAg~~~~~~a~~~~rp~~~m~~~G~~Dp 202 (312)
T COG3509 170 AAIAPVAGLLALGVACTPPRPVSVMAFHGTADP 202 (312)
T ss_pred cceeeeecccCCCcccCCCCchhHHHhcCCCCC
Confidence 8888888876 332 222223445556676665
No 74
>PRK10162 acetyl esterase; Provisional
Probab=95.55 E-value=0.046 Score=54.32 Aligned_cols=62 Identities=13% Similarity=0.088 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCc
Q 013879 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (434)
Q Consensus 169 ~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp 234 (434)
.+.+.++.+.-+.+ .....+++|+|+|.||+.+..+|.++.+... ....++|+++..|++|.
T Consensus 136 ~~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~---~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 136 VAVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRDKQI---DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHhcCC---CccChhheEEECCccCC
Confidence 33444444333322 1234679999999999999999987765421 12447889998998875
No 75
>PRK10115 protease 2; Provisional
Probab=95.36 E-value=0.038 Score=60.82 Aligned_cols=144 Identities=15% Similarity=0.100 Sum_probs=77.1
Q ss_pred EEEEeecCCCeeEEEEEEEecC--CCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEe
Q 013879 65 GYVTVNEHNGRALFYWFYEAMT--RPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFL 142 (434)
Q Consensus 65 Gy~~v~~~~~~~lfy~f~es~~--~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~i 142 (434)
-.+.+....|..+-.|++-... .....|+||+.+||||.+.. .+...+. -+|....=++.+
T Consensus 417 e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~-p~f~~~~----------------~~l~~rG~~v~~ 479 (686)
T PRK10115 417 EHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASID-ADFSFSR----------------LSLLDRGFVYAI 479 (686)
T ss_pred EEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCC-CCccHHH----------------HHHHHCCcEEEE
Confidence 3344444446777776654332 23456999999999999865 2322111 123333333333
Q ss_pred eCCCCcCcCCccC--CCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCcee
Q 013879 143 ESPIGVGFSYSNT--TNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYI 220 (434)
Q Consensus 143 DqPvg~GfSy~~~--~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~i 220 (434)
=.+-|.| .|+.. ..+... .-...-+|+.++.+. +....--....+.|.|-||||..+-.++.+ ..+.
T Consensus 480 ~n~RGs~-g~G~~w~~~g~~~-~k~~~~~D~~a~~~~-Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~---~Pdl----- 548 (686)
T PRK10115 480 VHVRGGG-ELGQQWYEDGKFL-KKKNTFNDYLDACDA-LLKLGYGSPSLCYGMGGSAGGMLMGVAINQ---RPEL----- 548 (686)
T ss_pred EEcCCCC-ccCHHHHHhhhhh-cCCCcHHHHHHHHHH-HHHcCCCChHHeEEEEECHHHHHHHHHHhc---Chhh-----
Confidence 3355543 23211 000000 001223455555543 333332334679999999999855444422 2222
Q ss_pred eeeeeEecCCCCCchhh
Q 013879 221 DLKGILLGNPETSTAED 237 (434)
Q Consensus 221 nLkGi~IGNg~idp~~q 237 (434)
++.++++.|++|....
T Consensus 549 -f~A~v~~vp~~D~~~~ 564 (686)
T PRK10115 549 -FHGVIAQVPFVDVVTT 564 (686)
T ss_pred -eeEEEecCCchhHhhh
Confidence 9999999999998754
No 76
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=95.31 E-value=0.039 Score=47.10 Aligned_cols=94 Identities=20% Similarity=0.275 Sum_probs=59.5
Q ss_pred EEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHH
Q 013879 93 LVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSY 172 (434)
Q Consensus 93 l~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~ 172 (434)
+||++||+.|.... +..+.+ .+.. +-.+++.+|.| |.|-+. ....+++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~-----------~l~~------~G~~v~~~~~~-~~~~~~-----------~~~~~~~~~ 50 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAE-----------ALAE------QGYAVVAFDYP-GHGDSD-----------GADAVERVL 50 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHH-----------HHHH------TTEEEEEESCT-TSTTSH-----------HSHHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHH-----------HHHH------CCCEEEEEecC-CCCccc-----------hhHHHHHHH
Confidence 58999999877665 555543 1221 12578888988 666551 111333333
Q ss_pred HHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 173 TFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 173 ~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
+.+. ..++ ..++++++|+|.||..+..++.+- .. +++++.-+|+
T Consensus 51 ~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~----~~------v~~~v~~~~~ 94 (145)
T PF12695_consen 51 ADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN----PR------VKAVVLLSPY 94 (145)
T ss_dssp HHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS----TT------ESEEEEESES
T ss_pred HHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc----cc------eeEEEEecCc
Confidence 3332 3233 357999999999999877777632 22 8888888884
No 77
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.27 E-value=0.027 Score=52.15 Aligned_cols=94 Identities=11% Similarity=0.054 Sum_probs=59.2
Q ss_pred cCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcC
Q 013879 135 KEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNK 214 (434)
Q Consensus 135 ~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~ 214 (434)
+=..++.+|.+-+.||+..-....... .-....+|+.++++...++. ......+.|+|.||||+.+..++.+ +.+
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~-~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~---~~~ 87 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGD-WGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQ---HPD 87 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTG-TTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHH---TCC
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhcc-ccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcc---cce
Confidence 446889999887777664321111111 22345667777666554433 4455789999999999998877752 222
Q ss_pred CCCceeeeeeeEecCCCCCchhhhh
Q 013879 215 DPSLYIDLKGILLGNPETSTAEDWQ 239 (434)
Q Consensus 215 ~~~~~inLkGi~IGNg~idp~~q~~ 239 (434)
.++.++.++|.+|+.....
T Consensus 88 ------~f~a~v~~~g~~d~~~~~~ 106 (213)
T PF00326_consen 88 ------RFKAAVAGAGVSDLFSYYG 106 (213)
T ss_dssp ------GSSEEEEESE-SSTTCSBH
T ss_pred ------eeeeeeccceecchhcccc
Confidence 2789999999999876543
No 78
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.02 E-value=0.082 Score=52.84 Aligned_cols=97 Identities=21% Similarity=0.310 Sum_probs=60.4
Q ss_pred CCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHH
Q 013879 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTA 168 (434)
Q Consensus 89 ~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a 168 (434)
.+.|-||.+|| =|.|+. .+.++ ..+.++....-++=||-| |-|+|-..+. +..-.+
T Consensus 56 ~~~~pvlllHG-F~~~~~---~w~~~-------------~~~L~~~~~~~v~aiDl~-G~g~~s~~~~------~~~y~~ 111 (326)
T KOG1454|consen 56 KDKPPVLLLHG-FGASSF---SWRRV-------------VPLLSKAKGLRVLAIDLP-GHGYSSPLPR------GPLYTL 111 (326)
T ss_pred CCCCcEEEecc-ccCCcc---cHhhh-------------ccccccccceEEEEEecC-CCCcCCCCCC------CCceeh
Confidence 57789999998 233211 11110 122333333457889988 8775422221 112344
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhh
Q 013879 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (434)
Q Consensus 169 ~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 212 (434)
.+....++.|+. ++...+++|.|+||||..+-.+|....+.
T Consensus 112 ~~~v~~i~~~~~---~~~~~~~~lvghS~Gg~va~~~Aa~~P~~ 152 (326)
T KOG1454|consen 112 RELVELIRRFVK---EVFVEPVSLVGHSLGGIVALKAAAYYPET 152 (326)
T ss_pred hHHHHHHHHHHH---hhcCcceEEEEeCcHHHHHHHHHHhCccc
Confidence 556666666666 44467899999999999999999887765
No 79
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=94.85 E-value=0.084 Score=53.94 Aligned_cols=82 Identities=20% Similarity=0.203 Sum_probs=51.3
Q ss_pred cCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcC
Q 013879 135 KEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNK 214 (434)
Q Consensus 135 ~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~ 214 (434)
+-.+||=||-| |+|+|.... ... +. ..++..+-.|+..-|+.....+.++|-|.||.|++.+|..=.++
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l~~-D~----~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R-- 285 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---LTQ-DS----SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR-- 285 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S-S--C----CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT--
T ss_pred CCCEEEEEccC-CCcccccCC---CCc-CH----HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc--
Confidence 34589999999 999984222 111 22 23445555666778988888999999999999999998432222
Q ss_pred CCCceeeeeeeEecCCCCCc
Q 013879 215 DPSLYIDLKGILLGNPETST 234 (434)
Q Consensus 215 ~~~~~inLkGi~IGNg~idp 234 (434)
||+++.-.|.++.
T Consensus 286 -------lkavV~~Ga~vh~ 298 (411)
T PF06500_consen 286 -------LKAVVALGAPVHH 298 (411)
T ss_dssp --------SEEEEES---SC
T ss_pred -------eeeEeeeCchHhh
Confidence 8887766665544
No 80
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=94.67 E-value=0.19 Score=48.72 Aligned_cols=116 Identities=18% Similarity=0.274 Sum_probs=75.4
Q ss_pred CCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCC----CCcccChHH
Q 013879 91 KPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTN----DYEMLGDDF 166 (434)
Q Consensus 91 ~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~----~~~~~~~~~ 166 (434)
+++++|+-|=||..+. +--|.+ .|..+- +....++=+... |++...... +....+.++
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~-----------~L~~~l---~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS-----------ALYEKL---NPQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH-----------HHHHhC---CCCCeeEEecCC---CCcCCcccccccCCCCccCHHH
Confidence 5799999999999998 776663 333331 455566666643 555443331 122348899
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 167 ~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
+.+.-.+||+++....+ ..+.+++|.|||-|+..+-.+..++.+ ...++++++.-=|.
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~~------~~~~V~~~~lLfPT 121 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLPD------LKFRVKKVILLFPT 121 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhccc------cCCceeEEEEeCCc
Confidence 99999999999887553 135789999999987665555555441 23445555554443
No 81
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=94.58 E-value=0.11 Score=48.89 Aligned_cols=39 Identities=15% Similarity=0.151 Sum_probs=30.7
Q ss_pred CCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 184 SYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 184 ~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
....+.+|++|.|-||.....++....+. +.++++..|.
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd~---------faa~a~~sG~ 131 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPDL---------FAAVAVVSGV 131 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCcc---------ceEEEeeccc
Confidence 45567899999999998888777655443 8888888875
No 82
>PRK11460 putative hydrolase; Provisional
Probab=94.53 E-value=0.21 Score=47.29 Aligned_cols=52 Identities=8% Similarity=-0.093 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 171 ~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
+.++++.+.+.. .....+++++|.|.||..+-.++.+- .+ .+.+++..+|.+
T Consensus 87 l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~~---~~------~~~~vv~~sg~~ 138 (232)
T PRK11460 87 FIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKAE---PG------LAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHhC---CC------cceEEEEecccc
Confidence 334444333332 34456899999999999987766432 11 145566666643
No 83
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.25 E-value=4.1 Score=42.90 Aligned_cols=82 Identities=21% Similarity=0.297 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCchhhhhh--HHHHH-hh
Q 013879 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAEDWQG--LVDYA-WS 247 (434)
Q Consensus 171 ~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~~q~~s--~~~~a-~~ 247 (434)
-...++.||.+-|++ -|..|.|=||+-.-..|++..+. +.||+.|.|.++...+... +...+ ..
T Consensus 102 aK~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~d---------fDGIlAgaPA~~~~~~~~~~~~~~~~~~~ 168 (474)
T PF07519_consen 102 AKALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPED---------FDGILAGAPAINWTHLQLAHAWPAQVMYP 168 (474)
T ss_pred HHHHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChhh---------cCeEEeCCchHHHHHHHHHhhhhhhhhcc
Confidence 345567888777754 79999999999999999998886 9999999999987654332 11111 11
Q ss_pred --cccCCHHHHHHHHh----hccc
Q 013879 248 --HAVVSDETHKIILR----TCDF 265 (434)
Q Consensus 248 --~gli~~~~~~~~~~----~c~~ 265 (434)
.+.++..+++.+.+ .|+.
T Consensus 169 ~~~~~~~~~~~~~i~~avl~~CD~ 192 (474)
T PF07519_consen 169 DPGGYLSPCKLDLIHAAVLAACDA 192 (474)
T ss_pred CCCCCCCHHHHHHHHHHHHHhccc
Confidence 25677777766543 5764
No 84
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=92.96 E-value=0.64 Score=47.44 Aligned_cols=132 Identities=17% Similarity=0.299 Sum_probs=77.6
Q ss_pred EEEEEeecCCCeeEEEEEEEecC----CCCCCCEEEEECCCCChhhhh-----hhhhhccCCeeEcCCCCccccCCCCcc
Q 013879 64 AGYVTVNEHNGRALFYWFYEAMT----RPQEKPLVLWLNGGPGCSSVG-----YGATQEIGPFLVDTDGRGLQFNPYAWN 134 (434)
Q Consensus 64 sGy~~v~~~~~~~lfy~f~es~~----~~~~~Pl~lwlnGGPG~ss~~-----~g~~~E~GP~~v~~~~~~l~~n~~sW~ 134 (434)
.-+|+..+ .|.-..=|+..... +..++|++|.|.|=+|.|.-. .....+.| ++
T Consensus 95 Reii~~~D-GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r---------------- 156 (409)
T KOG1838|consen 95 REIIKTSD-GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YR---------------- 156 (409)
T ss_pred eEEEEeCC-CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cE----------------
Confidence 45555543 23444456644322 246789999999999987521 33444455 32
Q ss_pred cCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcC
Q 013879 135 KEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNK 214 (434)
Q Consensus 135 ~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~ 214 (434)
.+-+- +-|-|-|--++..-+.. ... +|+-++++---++|| ..+++.+|.|+||..+ ..++-+.-+
T Consensus 157 ----~VVfN-~RG~~g~~LtTpr~f~a-g~t---~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~iL---~nYLGE~g~ 221 (409)
T KOG1838|consen 157 ----VVVFN-HRGLGGSKLTTPRLFTA-GWT---EDLREVVNHIKKRYP---QAPLFAVGFSMGGNIL---TNYLGEEGD 221 (409)
T ss_pred ----EEEEC-CCCCCCCccCCCceeec-CCH---HHHHHHHHHHHHhCC---CCceEEEEecchHHHH---HHHhhhccC
Confidence 22222 55888776655544432 222 233333333335788 6799999999999864 455554432
Q ss_pred CCCceeeeeeeEecCCC
Q 013879 215 DPSLYIDLKGILLGNPE 231 (434)
Q Consensus 215 ~~~~~inLkGi~IGNg~ 231 (434)
+ . -=..|++|=|||
T Consensus 222 ~--~-~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 222 N--T-PLIAAVAVCNPW 235 (409)
T ss_pred C--C-CceeEEEEeccc
Confidence 2 2 237889999998
No 85
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=92.38 E-value=0.27 Score=54.65 Aligned_cols=145 Identities=20% Similarity=0.132 Sum_probs=79.9
Q ss_pred eEEEEEEeecCCCeeEEEEEEEecC--CCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccC-cc
Q 013879 62 HYAGYVTVNEHNGRALFYWFYEAMT--RPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKE-AN 138 (434)
Q Consensus 62 ~~sGy~~v~~~~~~~lfy~f~es~~--~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~-~n 138 (434)
...+-+.+ .+-..++++.-..+ +.+.-||+++..|||++-+. .+.| .+..|.+.+... +=
T Consensus 498 ~~~~~i~~---~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v-~~~~-------------~~~~~~~~~s~~g~~ 560 (755)
T KOG2100|consen 498 VEFGKIEI---DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSV-TSKF-------------SVDWNEVVVSSRGFA 560 (755)
T ss_pred ceeEEEEe---ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCccee-eeeE-------------EecHHHHhhccCCeE
Confidence 44555555 23567777765542 23467999999999994333 1211 122233333322 45
Q ss_pred eeEeeCCCCcCcCCccCC--CCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCC
Q 013879 139 MLFLESPIGVGFSYSNTT--NDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDP 216 (434)
Q Consensus 139 ~l~iDqPvg~GfSy~~~~--~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 216 (434)
++.|| +.|+|+.- .+- .-.....+. ..+|.....+.+.+.+ ..-..++.|+|-||||-. +.+++.+-+
T Consensus 561 v~~vd-~RGs~~~G-~~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~----t~~~l~~~~-- 630 (755)
T KOG2100|consen 561 VLQVD-GRGSGGYG-WDFRSALPRNLGDV-EVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYL----TLKLLESDP-- 630 (755)
T ss_pred EEEEc-CCCcCCcc-hhHHHHhhhhcCCc-chHHHHHHHHHHHhcc-cccHHHeEEeccChHHHH----HHHHhhhCc--
Confidence 67888 66888652 211 000111212 2344555555555544 333457999999999965 344444321
Q ss_pred CceeeeeeeEecCCCCCch
Q 013879 217 SLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 217 ~~~inLkGi~IGNg~idp~ 235 (434)
.--+|--+..+|.+|..
T Consensus 631 --~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 631 --GDVFKCGVAVAPVTDWL 647 (755)
T ss_pred --CceEEEEEEecceeeee
Confidence 12366657778988876
No 86
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.07 E-value=0.65 Score=48.83 Aligned_cols=37 Identities=19% Similarity=0.181 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHH
Q 013879 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (434)
Q Consensus 169 ~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a 206 (434)
...++++++-...|. -..+++.|+|||.||+-+-.++
T Consensus 158 ~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 158 RLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 344556666555553 2356899999999998665444
No 87
>PRK11071 esterase YqiA; Provisional
Probab=91.98 E-value=0.16 Score=46.48 Aligned_cols=93 Identities=18% Similarity=0.222 Sum_probs=54.4
Q ss_pred CEEEEECCCCChhhhhhh--hhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHH
Q 013879 92 PLVLWLNGGPGCSSVGYG--ATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAN 169 (434)
Q Consensus 92 Pl~lwlnGGPG~ss~~~g--~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~ 169 (434)
|.||+|||-+|++.. +- .+.+ .+..+- ...+++..|-| |.| ++.++
T Consensus 2 p~illlHGf~ss~~~-~~~~~~~~-----------~l~~~~----~~~~v~~~dl~-g~~---------------~~~~~ 49 (190)
T PRK11071 2 STLLYLHGFNSSPRS-AKATLLKN-----------WLAQHH----PDIEMIVPQLP-PYP---------------ADAAE 49 (190)
T ss_pred CeEEEECCCCCCcch-HHHHHHHH-----------HHHHhC----CCCeEEeCCCC-CCH---------------HHHHH
Confidence 689999998877665 32 1111 010000 12356788877 321 22333
Q ss_pred HHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 170 DSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 170 ~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
++.++.+.. ..++++|+|.|.||.++-.+|.+.. .+ +++.||..+|.
T Consensus 50 ----~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~~-----------~~-~vl~~~~~~~~ 96 (190)
T PRK11071 50 ----LLESLVLEH---GGDPLGLVGSSLGGYYATWLSQCFM-----------LP-AVVVNPAVRPF 96 (190)
T ss_pred ----HHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHHcC-----------CC-EEEECCCCCHH
Confidence 344444433 3468999999999999988886531 12 35567766653
No 88
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=91.37 E-value=0.19 Score=46.75 Aligned_cols=58 Identities=10% Similarity=0.020 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 167 ~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
.++.+.+++....+.. ...++++|.|-|-||..+-.++.+-.+ .+.|++.-+|++-+.
T Consensus 86 s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~p~---------~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 86 SAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRYPE---------PLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCTSS---------TSSEEEEES---TTG
T ss_pred HHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHcCc---------CcCEEEEeecccccc
Confidence 3444555555444322 456789999999999887777643322 389999999987554
No 89
>PRK13604 luxD acyl transferase; Provisional
Probab=89.90 E-value=2 Score=42.42 Aligned_cols=124 Identities=15% Similarity=0.158 Sum_probs=70.2
Q ss_pred CeeEEEEEEEec-CCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCC
Q 013879 74 GRALFYWFYEAM-TRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSY 152 (434)
Q Consensus 74 ~~~lfy~f~es~-~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy 152 (434)
|..|.=|+.+.+ ++++..|++|..+| .|+....+.-|. .+-+.+=.++|-.|.--|.|-|-
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~~~~A-----------------~~La~~G~~vLrfD~rg~~GeS~ 80 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIASG-FARRMDHFAGLA-----------------EYLSSNGFHVIRYDSLHHVGLSS 80 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHHHHHH-----------------HHHHHCCCEEEEecCCCCCCCCC
Confidence 456666766654 34566788888887 566432112121 22234456899999764568773
Q ss_pred ccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 153 SNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 153 ~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
++- .+.........+....++++ ... ..++.|.|+|.||..+...|. ..+++++++..|..
T Consensus 81 G~~-~~~t~s~g~~Dl~aaid~lk----~~~---~~~I~LiG~SmGgava~~~A~-----------~~~v~~lI~~sp~~ 141 (307)
T PRK13604 81 GTI-DEFTMSIGKNSLLTVVDWLN----TRG---INNLGLIAASLSARIAYEVIN-----------EIDLSFLITAVGVV 141 (307)
T ss_pred Ccc-ccCcccccHHHHHHHHHHHH----hcC---CCceEEEEECHHHHHHHHHhc-----------CCCCCEEEEcCCcc
Confidence 221 12211112222333344443 321 357999999999988543332 12388899999987
Q ss_pred Cc
Q 013879 233 ST 234 (434)
Q Consensus 233 dp 234 (434)
+-
T Consensus 142 ~l 143 (307)
T PRK13604 142 NL 143 (307)
T ss_pred cH
Confidence 74
No 90
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=89.86 E-value=0.48 Score=44.95 Aligned_cols=67 Identities=13% Similarity=0.200 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCchh
Q 013879 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAE 236 (434)
Q Consensus 167 ~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~~ 236 (434)
.+.++.+||+...+.. ...+++|.+||.|+.-+-.....+.......+..-.|..|++.+|-+|...
T Consensus 75 s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 75 SGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred HHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHH
Confidence 3444555554443322 356899999999999998888888776432112237889999999888643
No 91
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=89.40 E-value=0.81 Score=39.00 Aligned_cols=62 Identities=16% Similarity=0.216 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 166 ~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
...+.+.+.|++..+++| +.++.|+|||-||-.+..+|.++.++... ...+++-+.-|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~--~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS--SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT--STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc--cccceeeeecCCccc
Confidence 345567777787777777 56899999999999999999999886532 235577777777765
No 92
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=89.28 E-value=1.6 Score=48.56 Aligned_cols=100 Identities=14% Similarity=0.074 Sum_probs=60.2
Q ss_pred CCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcC-CccC--------CCC--
Q 013879 90 EKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFS-YSNT--------TND-- 158 (434)
Q Consensus 90 ~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfS-y~~~--------~~~-- 158 (434)
..|+|+++||=.|.... +-.+.+ .|.. +-..++-+|.| |.|-| .... ...
T Consensus 448 g~P~VVllHG~~g~~~~-~~~lA~-----------~La~------~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~ 508 (792)
T TIGR03502 448 GWPVVIYQHGITGAKEN-ALAFAG-----------TLAA------AGVATIAIDHP-LHGARSFDANASGVNATNANVLA 508 (792)
T ss_pred CCcEEEEeCCCCCCHHH-HHHHHH-----------HHHh------CCcEEEEeCCC-CCCccccccccccccccccCccc
Confidence 35899999997777665 433321 1211 12367888887 88877 3210 000
Q ss_pred Cc--------ccChHHHHHHHHHHHHHHH------H---HCCCCCCCcEEEEeeccCcccchHHHHH
Q 013879 159 YE--------MLGDDFTANDSYTFLHKWF------L---KFPSYRRRTFYIAGESYAGRYIPELTEL 208 (434)
Q Consensus 159 ~~--------~~~~~~~a~~~~~fl~~F~------~---~fp~~~~~~~~i~GESYgG~yvp~~a~~ 208 (434)
|- ..+.++...|++......- . .+..+...++++.|||.||..+..++..
T Consensus 509 y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 509 YMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred eeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 10 1255677777765544322 1 1233556799999999999999888843
No 93
>COG0400 Predicted esterase [General function prediction only]
Probab=89.21 E-value=1.4 Score=41.11 Aligned_cols=127 Identities=15% Similarity=0.102 Sum_probs=71.5
Q ss_pred EEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEe-----eCCCCcCcCC
Q 013879 78 FYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFL-----ESPIGVGFSY 152 (434)
Q Consensus 78 fy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~i-----DqPvg~GfSy 152 (434)
|+..+++. ...++|+||||||= |....++.-+. -.+.++ +.++++ ..+....|+.
T Consensus 6 ~~~~i~~~-~~p~~~~iilLHG~-Ggde~~~~~~~----~~~~P~--------------~~~is~rG~v~~~g~~~~f~~ 65 (207)
T COG0400 6 FIPRIEKP-GDPAAPLLILLHGL-GGDELDLVPLP----ELILPN--------------ATLVSPRGPVAENGGPRFFRR 65 (207)
T ss_pred ccccccCC-CCCCCcEEEEEecC-CCChhhhhhhh----hhcCCC--------------CeEEcCCCCccccCcccceee
Confidence 34434443 34577999999983 65444311111 112222 233332 2233344554
Q ss_pred ccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 153 SNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 153 ~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
..... +..-+....+..+.+||....+.+. ...+++++.|-|=|+.++..+..+... .++|+++-.|..
T Consensus 66 ~~~~~-~d~edl~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~~~---------~~~~ail~~g~~ 134 (207)
T COG0400 66 YDEGS-FDQEDLDLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTLPG---------LFAGAILFSGML 134 (207)
T ss_pred cCCCc-cchhhHHHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhCch---------hhccchhcCCcC
Confidence 33322 1111344556667788887777653 335789999999999887766644432 388888888876
Q ss_pred Cch
Q 013879 233 STA 235 (434)
Q Consensus 233 dp~ 235 (434)
-+.
T Consensus 135 ~~~ 137 (207)
T COG0400 135 PLE 137 (207)
T ss_pred CCC
Confidence 544
No 94
>COG4099 Predicted peptidase [General function prediction only]
Probab=89.12 E-value=4.1 Score=39.93 Aligned_cols=113 Identities=27% Similarity=0.364 Sum_probs=59.7
Q ss_pred CCCeeEEEEEEEec-CCC--CCCCEEEEECCCCChhhh--------hhhhhhccCCeeEcCCCCccccCCCCcccCccee
Q 013879 72 HNGRALFYWFYEAM-TRP--QEKPLVLWLNGGPGCSSV--------GYGATQEIGPFLVDTDGRGLQFNPYAWNKEANML 140 (434)
Q Consensus 72 ~~~~~lfy~f~es~-~~~--~~~Pl~lwlnGGPG~ss~--------~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l 140 (434)
..+..|=|-||... -+| +--||+|||||+ |.-|- +.|.+.+-|| -.=.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHga-gq~g~dn~~~l~sg~gaiawa~p--------------------edqc 227 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGA-GQGGSDNDKVLSSGIGAIAWAGP--------------------EDQC 227 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecC-CCCCchhhhhhhcCccceeeecc--------------------cCce
Confidence 45678999888664 233 334999999996 43221 1344444443 1114
Q ss_pred EeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHh
Q 013879 141 FLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (434)
Q Consensus 141 ~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~ 211 (434)
||=.|= |..--.+... ..+.--....+.+.+=+..++..-.+.+|+.|-|-||.-.=+++.+..+
T Consensus 228 fVlAPQ-----y~~if~d~e~-~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd 292 (387)
T COG4099 228 FVLAPQ-----YNPIFADSEE-KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD 292 (387)
T ss_pred EEEccc-----cccccccccc-ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch
Confidence 454452 2111011000 0111112233333333334556667889999999999887777766554
No 95
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=88.97 E-value=2.5 Score=49.83 Aligned_cols=103 Identities=13% Similarity=0.156 Sum_probs=69.5
Q ss_pred CCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHH
Q 013879 91 KPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAND 170 (434)
Q Consensus 91 ~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~ 170 (434)
.|.++.++|+.|.+.. +..+.+ .+ .....++-+|.| |.|-+ .... .+.++.|++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~-----------~l-------~~~~~v~~~~~~-g~~~~---~~~~---~~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSR-----------YL-------DPQWSIYGIQSP-RPDGP---MQTA---TSLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHH-----------hc-------CCCCcEEEEECC-CCCCC---CCCC---CCHHHHHHH
Confidence 4668899999888777 655442 11 223577888988 66643 1111 267888888
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 171 ~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
+.+.++. ..+ ..+++++|+|+||..+-.+|.++.++.. .+..+++.+++
T Consensus 1122 ~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~~------~v~~l~l~~~~ 1170 (1296)
T PRK10252 1122 HLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARGE------EVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcCC------ceeEEEEecCC
Confidence 8777764 223 3589999999999999999988876532 36666665553
No 96
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=88.53 E-value=2 Score=42.16 Aligned_cols=45 Identities=20% Similarity=0.166 Sum_probs=37.9
Q ss_pred CCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCchh
Q 013879 187 RRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAE 236 (434)
Q Consensus 187 ~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~~ 236 (434)
.+++.++|+|-||+-+..+|....+.. ...+++.++..|++|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~-----~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRG-----LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcC-----CCCceEEEEEecccCCcc
Confidence 568999999999999999998887752 244888889999999876
No 97
>PLN02454 triacylglycerol lipase
Probab=88.07 E-value=1.4 Score=45.19 Aligned_cols=68 Identities=10% Similarity=0.166 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCc
Q 013879 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp 234 (434)
..+.+++...+++..+++|.++ ..++++|||.||-.+-..|..|.+.... ...++++.+..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~-~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS-GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc-ccCCceEEEEeCCCcccC
Confidence 4577788999999888888663 3699999999999999999888764221 124567778888887754
No 98
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.73 E-value=2.3 Score=40.52 Aligned_cols=103 Identities=22% Similarity=0.431 Sum_probs=57.1
Q ss_pred CCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCC----CcccCcceeEeeCCCCcCcCCccCCCCCcccC
Q 013879 88 PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPY----AWNKEANMLFLESPIGVGFSYSNTTNDYEMLG 163 (434)
Q Consensus 88 ~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~----sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~ 163 (434)
.+++|+++|+-|-||-++. +--|. = .|..|-- -|+ ..++=-.+-|.-+-=+-+....+ ..+
T Consensus 26 ~~~~~li~~IpGNPG~~gF-Y~~F~---~--------~L~~~l~~r~~~wt-Ish~~H~~~P~sl~~~~s~~~~e--ifs 90 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGF-YTEFA---R--------HLHLNLIDRLPVWT-ISHAGHALMPASLREDHSHTNEE--IFS 90 (301)
T ss_pred CCCceEEEEecCCCCchhH-HHHHH---H--------HHHHhcccccceeE-EeccccccCCccccccccccccc--ccc
Confidence 4788999999999998887 55443 1 1211111 121 11222223342111111111111 236
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcC
Q 013879 164 DDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNK 214 (434)
Q Consensus 164 ~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~ 214 (434)
.+++.+.-++|++++. | +++++||.|||-|. .+..+|+..++
T Consensus 91 L~~QV~HKlaFik~~~---P--k~~ki~iiGHSiGa----Ym~Lqil~~~k 132 (301)
T KOG3975|consen 91 LQDQVDHKLAFIKEYV---P--KDRKIYIIGHSIGA----YMVLQILPSIK 132 (301)
T ss_pred hhhHHHHHHHHHHHhC---C--CCCEEEEEecchhH----HHHHHHhhhcc
Confidence 7777888888888654 3 36789999999875 44555655543
No 99
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=87.61 E-value=1.2 Score=38.91 Aligned_cols=59 Identities=17% Similarity=0.184 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 166 ~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
..++.+...+++....+| ..+++|+|||.||..+-.+|.++.++... -..+-+..|.|-
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~~~~----~~~~~~~fg~p~ 67 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGRGLG----RLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhccCC----CceEEEEeCCCc
Confidence 344555566666655566 56899999999999999999988775211 224445555544
No 100
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=86.85 E-value=1.3 Score=40.57 Aligned_cols=45 Identities=27% Similarity=0.291 Sum_probs=37.9
Q ss_pred CCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCc
Q 013879 185 YRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (434)
Q Consensus 185 ~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp 234 (434)
+...+++|+|+|-||+.+..++.++.+... ..++++++..|++|.
T Consensus 68 ~d~~~i~l~G~SAGg~la~~~~~~~~~~~~-----~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 68 IDPERIVLIGDSAGGHLALSLALRARDRGL-----PKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTTT-----CHESEEEEESCHSST
T ss_pred ccccceEEeecccccchhhhhhhhhhhhcc-----cchhhhhcccccccc
Confidence 445789999999999999999988887532 239999999999877
No 101
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=86.81 E-value=4 Score=39.05 Aligned_cols=78 Identities=21% Similarity=0.243 Sum_probs=55.3
Q ss_pred CcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCC-CCCcEEEEeeccCcccchHHHHHHHhhcC
Q 013879 136 EANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSY-RRRTFYIAGESYAGRYIPELTELIHDRNK 214 (434)
Q Consensus 136 ~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~-~~~~~~i~GESYgG~yvp~~a~~i~~~n~ 214 (434)
..|+.=.|-- |.|.|-+..... +.-...+.+++.|++ .+ +..+++++|.|-|..- +-.+..+.
T Consensus 88 n~nv~~~DYS-GyG~S~G~psE~----n~y~Di~avye~Lr~------~~g~~~~Iil~G~SiGt~~----tv~Lasr~- 151 (258)
T KOG1552|consen 88 NCNVVSYDYS-GYGRSSGKPSER----NLYADIKAVYEWLRN------RYGSPERIILYGQSIGTVP----TVDLASRY- 151 (258)
T ss_pred cceEEEEecc-cccccCCCcccc----cchhhHHHHHHHHHh------hcCCCceEEEEEecCCchh----hhhHhhcC-
Confidence 4578888866 999997655432 555667778888875 34 4678999999999765 22332221
Q ss_pred CCCceeeeeeeEecCCCCCch
Q 013879 215 DPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 215 ~~~~~inLkGi~IGNg~idp~ 235 (434)
+ +.|+++-+|+++-.
T Consensus 152 ----~--~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 152 ----P--LAAVVLHSPFTSGM 166 (258)
T ss_pred ----C--cceEEEeccchhhh
Confidence 2 99999999987754
No 102
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=86.50 E-value=1.6 Score=45.37 Aligned_cols=41 Identities=15% Similarity=0.073 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHH
Q 013879 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTEL 208 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~ 208 (434)
++..+++.+.++++++..+ .++++|+|||.||..+-.++..
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 4556788888888887655 6799999999999887766643
No 103
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=86.12 E-value=1.2 Score=49.64 Aligned_cols=89 Identities=16% Similarity=0.188 Sum_probs=55.1
Q ss_pred CCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHC--------------CCCCCCcEEEEee
Q 013879 130 PYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKF--------------PSYRRRTFYIAGE 195 (434)
Q Consensus 130 ~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~f--------------p~~~~~~~~i~GE 195 (434)
.+-..+-++++++|.+ |+|-|-+.-.. -..+..+|..+.++ |+... -.+.+.++-++|.
T Consensus 273 ~~~~~rGYaVV~~D~R-Gtg~SeG~~~~-----~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~ 345 (767)
T PRK05371 273 DYFLPRGFAVVYVSGI-GTRGSDGCPTT-----GDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGK 345 (767)
T ss_pred HHHHhCCeEEEEEcCC-CCCCCCCcCcc-----CCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEE
Confidence 3334455789999966 99998654221 11222334333332 55422 1233568999999
Q ss_pred ccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCc
Q 013879 196 SYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (434)
Q Consensus 196 SYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp 234 (434)
||||...-.+|..-. -.||.|+-..|+.|.
T Consensus 346 SY~G~~~~~aAa~~p---------p~LkAIVp~a~is~~ 375 (767)
T PRK05371 346 SYLGTLPNAVATTGV---------EGLETIIPEAAISSW 375 (767)
T ss_pred cHHHHHHHHHHhhCC---------CcceEEEeeCCCCcH
Confidence 999988776664322 239999998888774
No 104
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=85.99 E-value=1.9 Score=40.36 Aligned_cols=60 Identities=18% Similarity=0.220 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCC
Q 013879 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (434)
Q Consensus 167 ~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~id 233 (434)
..+++...+++..+++| +.+++++|||-||-.+..+|..+.++. ...+++.+..|.|-+-
T Consensus 110 ~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 110 LYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC----CCCceEEEEeCCCCCC
Confidence 33445556666666666 567999999999999999998887653 1345888888887663
No 105
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=85.58 E-value=1.2 Score=45.74 Aligned_cols=57 Identities=7% Similarity=-0.027 Sum_probs=40.7
Q ss_pred CcccChHHHHHHHHHHHHHHHHHCCCCCCCcEE-EEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 159 YEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFY-IAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 159 ~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~-i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
++..+.++.++++..+|+. +.-.+++ +.|+|+||..+-.+|.+-.+. ++++++.++.
T Consensus 138 fP~~t~~d~~~~~~~ll~~-------lgi~~~~~vvG~SmGG~ial~~a~~~P~~---------v~~lv~ia~~ 195 (389)
T PRK06765 138 FPVVTILDFVRVQKELIKS-------LGIARLHAVMGPSMGGMQAQEWAVHYPHM---------VERMIGVIGN 195 (389)
T ss_pred CCcCcHHHHHHHHHHHHHH-------cCCCCceEEEEECHHHHHHHHHHHHChHh---------hheEEEEecC
Confidence 3334667777777776653 2234665 999999999999999877665 7778887664
No 106
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=85.04 E-value=3.7 Score=42.44 Aligned_cols=36 Identities=17% Similarity=0.112 Sum_probs=26.8
Q ss_pred CcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 188 RTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 188 ~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
....|+|.|+||.-+-.+|.+-.+. +.+++..+|-+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~---------Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPER---------FGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCccc---------ccEEEEeccce
Confidence 4589999999999877777554332 77777777754
No 107
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=83.85 E-value=3.2 Score=42.96 Aligned_cols=98 Identities=15% Similarity=0.138 Sum_probs=59.5
Q ss_pred CcceeEeeCCCCcCcCCccCC---CCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhh
Q 013879 136 EANMLFLESPIGVGFSYSNTT---NDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (434)
Q Consensus 136 ~~n~l~iDqPvg~GfSy~~~~---~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 212 (434)
.|-|+++|.. =.|-|..... .+...++.+|+-.|+..|++.+-.++....+.|++++|-||||.-+.-+-.+-.+-
T Consensus 59 ~a~~v~lEHR-yYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~ 137 (434)
T PF05577_consen 59 GALVVALEHR-YYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHL 137 (434)
T ss_dssp TEEEEEE--T-TSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT
T ss_pred CCcEEEeehh-hhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCe
Confidence 4678889977 7777763221 12233588999999999999887777666677999999999998765555444321
Q ss_pred cCCCCceeeeeeeEecCCCCCchhhhhhHHH
Q 013879 213 NKDPSLYIDLKGILLGNPETSTAEDWQGLVD 243 (434)
Q Consensus 213 n~~~~~~inLkGi~IGNg~idp~~q~~s~~~ 243 (434)
+.|..--++-+....++..|.+
T Consensus 138 ---------~~ga~ASSapv~a~~df~~y~~ 159 (434)
T PF05577_consen 138 ---------FDGAWASSAPVQAKVDFWEYFE 159 (434)
T ss_dssp ----------SEEEEET--CCHCCTTTHHHH
T ss_pred ---------eEEEEeccceeeeecccHHHHH
Confidence 5555555666666555444433
No 108
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=83.59 E-value=2.3 Score=43.35 Aligned_cols=64 Identities=19% Similarity=0.132 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCC-CcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCchhh
Q 013879 165 DFTANDSYTFLHKWFLKFPSYRR-RTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAED 237 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~~-~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~~q 237 (434)
-.+|.|+..+|..-...||.... .|+.+.|.|||| |+..++.+|.= -.+.||+=-++|.-|..+
T Consensus 160 IMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~aP--------~~~~~~iDns~~~~p~l~ 224 (403)
T PF11144_consen 160 IMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIAP--------WLFDGVIDNSSYALPPLR 224 (403)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhCc--------cceeEEEecCccccchhh
Confidence 46789999999888888999875 799999999987 66777777742 236677666677766543
No 109
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=83.43 E-value=1.5 Score=42.22 Aligned_cols=83 Identities=18% Similarity=0.163 Sum_probs=53.8
Q ss_pred cceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCC
Q 013879 137 ANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDP 216 (434)
Q Consensus 137 ~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 216 (434)
..+|.+|.. |+|-|.+.-... ....++|.++.+ +|....| +.+-++-++|.||+|.....+|..-.
T Consensus 58 Y~vV~~D~R-G~g~S~G~~~~~-----~~~e~~D~~d~I-~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~~------ 123 (272)
T PF02129_consen 58 YAVVVQDVR-GTGGSEGEFDPM-----SPNEAQDGYDTI-EWIAAQP-WSNGKVGMYGISYGGFTQWAAAARRP------ 123 (272)
T ss_dssp -EEEEEE-T-TSTTS-S-B-TT-----SHHHHHHHHHHH-HHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT-------
T ss_pred CEEEEECCc-ccccCCCccccC-----ChhHHHHHHHHH-HHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcCC------
Confidence 478999955 999996544321 344455555544 4665665 43457999999999999888876222
Q ss_pred CceeeeeeeEecCCCCCchh
Q 013879 217 SLYIDLKGILLGNPETSTAE 236 (434)
Q Consensus 217 ~~~inLkGi~IGNg~idp~~ 236 (434)
-.||.|+..-++.|...
T Consensus 124 ---p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 124 ---PHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred ---CCceEEEecccCCcccc
Confidence 23999999888877654
No 110
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=83.27 E-value=6 Score=35.24 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=48.8
Q ss_pred CcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCC
Q 013879 136 EANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD 215 (434)
Q Consensus 136 ~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~ 215 (434)
...++.+|.| |.|.+-. ... +.+..++.....+.. ..+ ..+++++|+|+||..+-.+|.++.++..
T Consensus 25 ~~~v~~~~~~-g~~~~~~-----~~~-~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~~- 90 (212)
T smart00824 25 RRDVSALPLP-GFGPGEP-----LPA-SADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARGI- 90 (212)
T ss_pred CccEEEecCC-CCCCCCC-----CCC-CHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCCC-
Confidence 4578889977 6664421 111 445555555444442 333 4689999999999999999998876532
Q ss_pred CCceeeeeeeEecCC
Q 013879 216 PSLYIDLKGILLGNP 230 (434)
Q Consensus 216 ~~~~inLkGi~IGNg 230 (434)
..+++++.+.
T Consensus 91 -----~~~~l~~~~~ 100 (212)
T smart00824 91 -----PPAAVVLLDT 100 (212)
T ss_pred -----CCcEEEEEcc
Confidence 2566665554
No 111
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=83.01 E-value=2.3 Score=39.00 Aligned_cols=43 Identities=28% Similarity=0.329 Sum_probs=32.6
Q ss_pred CCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCchhhhh
Q 013879 185 YRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAEDWQ 239 (434)
Q Consensus 185 ~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~~q~~ 239 (434)
.....+.|+|-|.||.|+-.+|.+. +++. ++.||.+.|.....
T Consensus 56 ~~~~~~~liGSSlGG~~A~~La~~~-----------~~~a-vLiNPav~p~~~l~ 98 (187)
T PF05728_consen 56 LKPENVVLIGSSLGGFYATYLAERY-----------GLPA-VLINPAVRPYELLQ 98 (187)
T ss_pred CCCCCeEEEEEChHHHHHHHHHHHh-----------CCCE-EEEcCCCCHHHHHH
Confidence 3345599999999999999988655 2555 56699999976543
No 112
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=82.34 E-value=2.8 Score=42.80 Aligned_cols=62 Identities=26% Similarity=0.364 Sum_probs=37.7
Q ss_pred CcceeEee-------CCCCcCcCCccCCC-CCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCccc
Q 013879 136 EANMLFLE-------SPIGVGFSYSNTTN-DYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRY 201 (434)
Q Consensus 136 ~~n~l~iD-------qPvg~GfSy~~~~~-~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~y 201 (434)
.|-|+|+| +|.|.- ||.+... ++ .+.+|+-.|+ +.|..++++...=+..|++.+|-||||+-
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgy--LtseQALADf-A~ll~~lK~~~~a~~~pvIafGGSYGGML 180 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGY--LTSEQALADF-AELLTFLKRDLSAEASPVIAFGGSYGGML 180 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhcc--ccHHHHHHHH-HHHHHHHhhccccccCcEEEecCchhhHH
Confidence 46788887 466665 5543321 23 2455544444 44555666554445679999999999954
No 113
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=82.21 E-value=3.4 Score=41.23 Aligned_cols=62 Identities=21% Similarity=0.243 Sum_probs=39.5
Q ss_pred cCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchH
Q 013879 135 KEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPE 204 (434)
Q Consensus 135 ~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~ 204 (434)
..+|++...-| |||+|.+.... .+...+++...++|++ ....-+.+++.+.|+|-||-....
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~~s~----~dLv~~~~a~v~yL~d---~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGPPSR----KDLVKDYQACVRYLRD---EEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred cCCcEEEECCC-ccccCCCCCCH----HHHHHHHHHHHHHHHh---cccCCChheEEEeeccccHHHHHH
Confidence 45899999988 99999544321 1333444444444432 222234578999999999987554
No 114
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=82.02 E-value=7.2 Score=30.25 Aligned_cols=78 Identities=22% Similarity=0.203 Sum_probs=49.4
Q ss_pred eeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCcc
Q 013879 75 RALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSN 154 (434)
Q Consensus 75 ~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~ 154 (434)
.+||+..+..++ + .+.+|+.++|--..|.- +..|.+ .|..+- .++.-+|+. |-|.|-+.
T Consensus 2 ~~L~~~~w~p~~-~-~k~~v~i~HG~~eh~~r-y~~~a~-----------~L~~~G------~~V~~~D~r-GhG~S~g~ 60 (79)
T PF12146_consen 2 TKLFYRRWKPEN-P-PKAVVVIVHGFGEHSGR-YAHLAE-----------FLAEQG------YAVFAYDHR-GHGRSEGK 60 (79)
T ss_pred cEEEEEEecCCC-C-CCEEEEEeCCcHHHHHH-HHHHHH-----------HHHhCC------CEEEEECCC-cCCCCCCc
Confidence 467777665542 2 67899999997444555 555542 333333 378899988 99999643
Q ss_pred CCCCCcccChHHHHHHHHHHHH
Q 013879 155 TTNDYEMLGDDFTANDSYTFLH 176 (434)
Q Consensus 155 ~~~~~~~~~~~~~a~~~~~fl~ 176 (434)
. .... +.++..+|+..|++
T Consensus 61 r--g~~~-~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 61 R--GHID-SFDDYVDDLHQFIQ 79 (79)
T ss_pred c--cccC-CHHHHHHHHHHHhC
Confidence 2 2222 56677777776653
No 115
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=81.78 E-value=9.3 Score=35.95 Aligned_cols=122 Identities=12% Similarity=0.052 Sum_probs=60.4
Q ss_pred CCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHH
Q 013879 90 EKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAN 169 (434)
Q Consensus 90 ~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~ 169 (434)
+...||+++|--|+... +..+...- .. ... ...+....++.-+|=.- -+|.... ......++
T Consensus 3 ~g~pVlFIhG~~Gs~~q-~rsl~~~~----~~---~~~--~~~~~~~~d~ft~df~~--~~s~~~g------~~l~~q~~ 64 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQ-VRSLASEL----QR---KAL--LNDNSSHFDFFTVDFNE--ELSAFHG------RTLQRQAE 64 (225)
T ss_pred CCCEEEEECcCCCCHhH-HHHHHHHH----hh---hhh--hccCccceeEEEeccCc--ccccccc------ccHHHHHH
Confidence 45679999998887765 33332110 00 000 11122334555555221 1121111 13345566
Q ss_pred HHHHHHHHHHHHC--CCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeee-eEecCCCCCch
Q 013879 170 DSYTFLHKWFLKF--PSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKG-ILLGNPETSTA 235 (434)
Q Consensus 170 ~~~~fl~~F~~~f--p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkG-i~IGNg~idp~ 235 (434)
.+.+.++...+.+ ..-..+++.|.|||.||.-+=.+. ...+.. .-++++ |.+|.|...+.
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l-~~~~~~-----~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSAL-SLPNYD-----PDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHH-hccccc-----cccEEEEEEEcCCCCCcc
Confidence 6667777666654 122367899999999996433322 222211 112333 45677766554
No 116
>PLN02571 triacylglycerol lipase
Probab=79.62 E-value=5.7 Score=40.85 Aligned_cols=69 Identities=10% Similarity=0.113 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCC-----CCceeeeeeeEecCCCCCc
Q 013879 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD-----PSLYIDLKGILLGNPETST 234 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~-----~~~~inLkGi~IGNg~idp 234 (434)
..+.++++..++.+.+++|.. ..+++++|||.||-.+-..|..|....-. ....+++..+..|.|-+..
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 345677888888888888765 34799999999999999999988753211 0123567778888887654
No 117
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=79.54 E-value=3.2 Score=38.05 Aligned_cols=62 Identities=16% Similarity=0.277 Sum_probs=50.6
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 163 ~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
+.+++|.|+-+.++.+.+ ++..+++.|+|-|+|.-.+|.+..++...-+ =.++++++-.+-.
T Consensus 46 tP~~~a~Dl~~~i~~y~~---~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r-----~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRA---RWGRKRVVLIGYSFGADVLPFIYNRLPAALR-----ARVAQVVLLSPST 107 (192)
T ss_pred CHHHHHHHHHHHHHHHHH---HhCCceEEEEeecCCchhHHHHHhhCCHHHH-----hheeEEEEeccCC
Confidence 789999999999998887 4447899999999999999999999877543 3477777766543
No 118
>KOG3101 consensus Esterase D [General function prediction only]
Probab=79.46 E-value=12 Score=35.03 Aligned_cols=68 Identities=12% Similarity=-0.064 Sum_probs=42.0
Q ss_pred CCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCchhhhhhHHHHHhhcccCCHHHHHHHHhh
Q 013879 185 YRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILRT 262 (434)
Q Consensus 185 ~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~~q~~s~~~~a~~~gli~~~~~~~~~~~ 262 (434)
+...++-|+|||.|||=+-.++.+=.. ..|++.--.|.++|..---+.-.|.-+.|- ++.+++.....
T Consensus 138 ld~~k~~IfGHSMGGhGAl~~~Lkn~~---------kykSvSAFAPI~NP~~cpWGqKAf~gYLG~-~ka~W~~yDat 205 (283)
T KOG3101|consen 138 LDPLKVGIFGHSMGGHGALTIYLKNPS---------KYKSVSAFAPICNPINCPWGQKAFTGYLGD-NKAQWEAYDAT 205 (283)
T ss_pred ccchhcceeccccCCCceEEEEEcCcc---------cccceeccccccCcccCcchHHHhhcccCC-ChHHHhhcchH
Confidence 334568999999999976655532221 377887778888886643334444444554 55566554433
No 119
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=78.49 E-value=19 Score=34.78 Aligned_cols=77 Identities=16% Similarity=0.170 Sum_probs=55.1
Q ss_pred ceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCC
Q 013879 138 NMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPS 217 (434)
Q Consensus 138 n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~ 217 (434)
-++-++.| |.|. ..... .+.++.|+...+.|+ +..| .-|.++.|.|+||.-+=.+|.++..+-..
T Consensus 28 ~v~~l~a~-g~~~----~~~~~--~~l~~~a~~yv~~Ir---~~QP---~GPy~L~G~S~GG~vA~evA~qL~~~G~~-- 92 (257)
T COG3319 28 PVYGLQAP-GYGA----GEQPF--ASLDDMAAAYVAAIR---RVQP---EGPYVLLGWSLGGAVAFEVAAQLEAQGEE-- 92 (257)
T ss_pred eeeccccC-cccc----ccccc--CCHHHHHHHHHHHHH---HhCC---CCCEEEEeeccccHHHHHHHHHHHhCCCe--
Confidence 46667777 5443 11112 167778887777776 4677 45999999999999999999999987544
Q ss_pred ceeeeeeeEecCCCCC
Q 013879 218 LYIDLKGILLGNPETS 233 (434)
Q Consensus 218 ~~inLkGi~IGNg~id 233 (434)
..-++|.+....
T Consensus 93 ----Va~L~llD~~~~ 104 (257)
T COG3319 93 ----VAFLGLLDAVPP 104 (257)
T ss_pred ----EEEEEEeccCCC
Confidence 666777666655
No 120
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=77.97 E-value=3.6 Score=38.30 Aligned_cols=44 Identities=16% Similarity=0.223 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHh
Q 013879 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (434)
Q Consensus 166 ~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~ 211 (434)
.+-.|+.++.+.|++.+++ +|||+|+|||=|+..+-.|-++-.+
T Consensus 75 ~ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~ 118 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIA 118 (207)
T ss_pred hhHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhc
Confidence 3455778888888887764 7899999999999887766655443
No 121
>PRK04940 hypothetical protein; Provisional
Probab=75.87 E-value=5.5 Score=36.24 Aligned_cols=38 Identities=18% Similarity=0.368 Sum_probs=30.8
Q ss_pred CcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCchhh
Q 013879 188 RTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAED 237 (434)
Q Consensus 188 ~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~~q 237 (434)
.++.|+|-|-||.|+..+|.+- .++.|+| ||.+.|...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~-----------g~~aVLi-NPAv~P~~~ 97 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC-----------GIRQVIF-NPNLFPEEN 97 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH-----------CCCEEEE-CCCCChHHH
Confidence 4789999999999999888653 2677666 999999654
No 122
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=74.96 E-value=12 Score=35.36 Aligned_cols=86 Identities=13% Similarity=0.078 Sum_probs=56.9
Q ss_pred ceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCC
Q 013879 138 NMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPS 217 (434)
Q Consensus 138 n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~ 217 (434)
+...|+-|.+.+-=-+.....+.. +.++-++.+.+.+..+.. ..+++.|+|.|-|+..+-..++++.+....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~-Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~-- 75 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDE-SVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP-- 75 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccch-HHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC--
Confidence 445666676443211111112222 566777778888876554 478999999999999999999888875331
Q ss_pred ceeeeeeeEecCCC
Q 013879 218 LYIDLKGILLGNPE 231 (434)
Q Consensus 218 ~~inLkGi~IGNg~ 231 (434)
..=+++-+++||+.
T Consensus 76 ~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 76 PPDDLSFVLIGNPR 89 (225)
T ss_pred CcCceEEEEecCCC
Confidence 11468999999984
No 123
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=74.45 E-value=20 Score=37.51 Aligned_cols=69 Identities=20% Similarity=0.169 Sum_probs=45.5
Q ss_pred cceeEeeCCCCcCcCCccCC---CCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHH
Q 013879 137 ANMLFLESPIGVGFSYSNTT---NDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (434)
Q Consensus 137 ~n~l~iDqPvg~GfSy~~~~---~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a 206 (434)
|.++.+|.. =.|-|..... .+....+.+++-.|+.+|++.--.+|+.-.+.|++.+|-||.|-..+=+-
T Consensus 119 A~v~~lEHR-FYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R 190 (514)
T KOG2182|consen 119 ATVFQLEHR-FYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFR 190 (514)
T ss_pred CeeEEeeee-ccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHH
Confidence 567777765 3444421111 11223477888889999998877788766556999999999886544443
No 124
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=73.07 E-value=7.2 Score=38.98 Aligned_cols=28 Identities=14% Similarity=0.108 Sum_probs=25.4
Q ss_pred CCeEEEEecCCccccCcchHHHHHHhcC
Q 013879 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLG 414 (434)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~ 414 (434)
..+||+.+|..|.+++....+.+.+.+.
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~ 313 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVS 313 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcC
Confidence 5899999999999999999998888775
No 125
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=72.00 E-value=1e+02 Score=30.20 Aligned_cols=101 Identities=20% Similarity=0.321 Sum_probs=61.7
Q ss_pred CCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCc--ceeEeeCCCCcCcCCccCCCCCcccChHHH
Q 013879 90 EKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEA--NMLFLESPIGVGFSYSNTTNDYEMLGDDFT 167 (434)
Q Consensus 90 ~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~--n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~ 167 (434)
...+|+=++|-||+=== +--+. ++...+ -+|=|.-| |.|++-......+ +.++-
T Consensus 34 ~~gTVv~~hGsPGSH~D-FkYi~-------------------~~l~~~~iR~I~iN~P-Gf~~t~~~~~~~~---~n~er 89 (297)
T PF06342_consen 34 PLGTVVAFHGSPGSHND-FKYIR-------------------PPLDEAGIRFIGINYP-GFGFTPGYPDQQY---TNEER 89 (297)
T ss_pred CceeEEEecCCCCCccc-hhhhh-------------------hHHHHcCeEEEEeCCC-CCCCCCCCccccc---ChHHH
Confidence 44589999999997421 11000 111222 34666778 8888754333222 33333
Q ss_pred HHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 168 ANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 168 a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
+ .|...|++.- +.. ..+.+.|||-|+--+-.+|... ++.|+++.||.
T Consensus 90 ~----~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~-----------~~~g~~lin~~ 136 (297)
T PF06342_consen 90 Q----NFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH-----------PLHGLVLINPP 136 (297)
T ss_pred H----HHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC-----------ccceEEEecCC
Confidence 3 4555555543 333 5788999999999888887544 27899999986
No 126
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=71.20 E-value=1.2 Score=44.50 Aligned_cols=71 Identities=11% Similarity=0.185 Sum_probs=46.5
Q ss_pred cCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHh
Q 013879 135 KEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (434)
Q Consensus 135 ~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~ 211 (434)
...|||.||=-.+..-.|... ..+...+++.+-.||+.....+ .+...+++|+|+|.|+|.+-.+++++..
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~a-----~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQA-----VANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHHH-----HHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccch-----hhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 357999999544443333211 1255677777778887766432 2335789999999999999988888866
No 127
>PLN02753 triacylglycerol lipase
Probab=70.35 E-value=12 Score=39.52 Aligned_cols=72 Identities=11% Similarity=0.070 Sum_probs=50.9
Q ss_pred ChHHHHHHHHHHHHHHHHHCCC--CCCCcEEEEeeccCcccchHHHHHHHhhcCC--C-CceeeeeeeEecCCCCCc
Q 013879 163 GDDFTANDSYTFLHKWFLKFPS--YRRRTFYIAGESYAGRYIPELTELIHDRNKD--P-SLYIDLKGILLGNPETST 234 (434)
Q Consensus 163 ~~~~~a~~~~~fl~~F~~~fp~--~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~--~-~~~inLkGi~IGNg~idp 234 (434)
+...+.++++..++...+++|. .....++|+|||.||-.+-..|..|.+..-. . ...+++.-+.-|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 3445778888889998887763 2245799999999999999999888763211 1 123556677777776654
No 128
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=69.21 E-value=6.3 Score=36.65 Aligned_cols=72 Identities=10% Similarity=0.026 Sum_probs=49.6
Q ss_pred CcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeE
Q 013879 147 GVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGIL 226 (434)
Q Consensus 147 g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~ 226 (434)
-+||-++... .+.+++..++..+++--|+.+|.- +.+.+.|||-|.|-+..+..++.. + .+.|++
T Consensus 102 svgY~l~~q~-----htL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R~r~--p------rI~gl~ 166 (270)
T KOG4627|consen 102 SVGYNLCPQV-----HTLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMRQRS--P------RIWGLI 166 (270)
T ss_pred EeccCcCccc-----ccHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHHhcC--c------hHHHHH
Confidence 4566655442 167888888999988878888743 358999999999988777777432 2 266666
Q ss_pred ecCCCCC
Q 013879 227 LGNPETS 233 (434)
Q Consensus 227 IGNg~id 233 (434)
+-.|+-+
T Consensus 167 l~~GvY~ 173 (270)
T KOG4627|consen 167 LLCGVYD 173 (270)
T ss_pred HHhhHhh
Confidence 6666544
No 129
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=68.94 E-value=28 Score=34.69 Aligned_cols=141 Identities=16% Similarity=0.174 Sum_probs=67.6
Q ss_pred CeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhh---hhhhccCCeeEcCC--CCccccCCCCcccCcceeEeeCCCCc
Q 013879 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGY---GATQEIGPFLVDTD--GRGLQFNPYAWNKEANMLFLESPIGV 148 (434)
Q Consensus 74 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~---g~~~E~GP~~v~~~--~~~l~~n~~sW~~~~n~l~iDqPvg~ 148 (434)
+..++=|++.-++.....|.||.++|..|.+.. . -.+...|=..+..| |.. ....+..-...+..-
T Consensus 66 g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~-~~~~~~~a~~G~~vl~~d~rGqg--------~~~~d~~~~~~~~~~ 136 (320)
T PF05448_consen 66 GSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGD-PFDLLPWAAAGYAVLAMDVRGQG--------GRSPDYRGSSGGTLK 136 (320)
T ss_dssp GEEEEEEEEEES-SSSSEEEEEEE--TT--GGG-HHHHHHHHHTT-EEEEE--TTTS--------SSS-B-SSBSSS-SS
T ss_pred CCEEEEEEEecCCCCCCcCEEEEecCCCCCCCC-cccccccccCCeEEEEecCCCCC--------CCCCCccccCCCCCc
Confidence 566777777665456778999999998777544 2 12344443333222 111 000010000111222
Q ss_pred CcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEec
Q 013879 149 GFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLG 228 (434)
Q Consensus 149 GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IG 228 (434)
|+-...-.......=-..+..|.+..+ .|+...|+...+.+.++|+|-||...-.+|. +..+ ++.++..
T Consensus 137 g~~~~g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~r---------v~~~~~~ 205 (320)
T PF05448_consen 137 GHITRGIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDPR---------VKAAAAD 205 (320)
T ss_dssp SSTTTTTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSST----------SEEEEE
T ss_pred cHHhcCccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCcc---------ccEEEec
Confidence 222110000000000011223333333 3566789998889999999999988766664 4332 7888888
Q ss_pred CCCCCc
Q 013879 229 NPETST 234 (434)
Q Consensus 229 Ng~idp 234 (434)
.|++..
T Consensus 206 vP~l~d 211 (320)
T PF05448_consen 206 VPFLCD 211 (320)
T ss_dssp SESSSS
T ss_pred CCCccc
Confidence 776543
No 130
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=68.93 E-value=24 Score=36.98 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=22.1
Q ss_pred HHHHHHHHHHCCCCCCCcEEEEeeccCcccchHH
Q 013879 172 YTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPEL 205 (434)
Q Consensus 172 ~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~ 205 (434)
++..++..+.|--= ..++-|+|||-|++-|-.+
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHHHHh
Confidence 34556666666432 3579999999999875544
No 131
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=68.68 E-value=5.1 Score=37.67 Aligned_cols=56 Identities=14% Similarity=0.122 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 167 ~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
..+++..++++ +|+-...+ ..|+|.|.||.-+-.+|.+-.+. +.+++.-+|.+++.
T Consensus 98 l~~el~p~i~~---~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~---------F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEA---NYRTDPDR-RAIAGHSMGGYGALYLALRHPDL---------FGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHH---HSSEEECC-EEEEEETHHHHHHHHHHHHSTTT---------ESEEEEESEESETT
T ss_pred hhccchhHHHH---hcccccce-eEEeccCCCcHHHHHHHHhCccc---------cccccccCcccccc
Confidence 34455555554 44433333 89999999999888777664443 89999999888776
No 132
>PLN02719 triacylglycerol lipase
Probab=67.92 E-value=14 Score=38.97 Aligned_cols=70 Identities=10% Similarity=0.117 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCC--CCcEEEEeeccCcccchHHHHHHHhhcCC--C-CceeeeeeeEecCCCCCc
Q 013879 165 DFTANDSYTFLHKWFLKFPSYR--RRTFYIAGESYAGRYIPELTELIHDRNKD--P-SLYIDLKGILLGNPETST 234 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~--~~~~~i~GESYgG~yvp~~a~~i~~~n~~--~-~~~inLkGi~IGNg~idp 234 (434)
..+.++++..+++..+++|... ...++|+|||.||-.+...|..|.+..-. . ...+++.-+.-|.|=+..
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 4466788888988888888642 34699999999999999999988764211 1 123445567777776543
No 133
>PLN02934 triacylglycerol lipase
Probab=67.80 E-value=14 Score=38.96 Aligned_cols=41 Identities=12% Similarity=0.162 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhh
Q 013879 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (434)
Q Consensus 169 ~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 212 (434)
.++...|+++.+.+|. .+++++|||-||-.+-.+|..+..+
T Consensus 305 ~~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHHh
Confidence 3577778888888884 4799999999999988888776543
No 134
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=67.14 E-value=14 Score=36.04 Aligned_cols=41 Identities=20% Similarity=0.220 Sum_probs=31.0
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchH
Q 013879 164 DDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPE 204 (434)
Q Consensus 164 ~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~ 204 (434)
-.++|+.+++.+..-....|+=..-++|++|||-|..=.-.
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~ 125 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEA 125 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhh
Confidence 45677788888888888888776556999999987654433
No 135
>PLN00413 triacylglycerol lipase
Probab=65.72 E-value=6.9 Score=40.88 Aligned_cols=39 Identities=21% Similarity=0.294 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHh
Q 013879 170 DSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (434)
Q Consensus 170 ~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~ 211 (434)
++...|+++++.+| +.+++++|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p---~~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNP---TSKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCC---CCeEEEEecCHHHHHHHHHHHHHHh
Confidence 56677888888787 4579999999999999888877654
No 136
>PLN02761 lipase class 3 family protein
Probab=63.30 E-value=19 Score=38.06 Aligned_cols=70 Identities=9% Similarity=0.053 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCC-C--CCcEEEEeeccCcccchHHHHHHHhhcCC----CCceeeeeeeEecCCCCCc
Q 013879 165 DFTANDSYTFLHKWFLKFPSY-R--RRTFYIAGESYAGRYIPELTELIHDRNKD----PSLYIDLKGILLGNPETST 234 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~-~--~~~~~i~GESYgG~yvp~~a~~i~~~n~~----~~~~inLkGi~IGNg~idp 234 (434)
..+.++++..++...+.+|.. + ...++|+|||.||-.+-..|..|.+.+-. ....+++.-+..|.|=+..
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 356678888888888877532 1 23599999999999999999888753211 1234556677777776543
No 137
>PLN02324 triacylglycerol lipase
Probab=62.48 E-value=24 Score=36.38 Aligned_cols=69 Identities=9% Similarity=0.064 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCC------CCceeeeeeeEecCCCCCc
Q 013879 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD------PSLYIDLKGILLGNPETST 234 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~------~~~~inLkGi~IGNg~idp 234 (434)
..+.+++..-+++..+++|.. ...+.|+|||.||-.+...|..|.+.... ....+++.-+.-|.|-+..
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN 267 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGD 267 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCC
Confidence 456677888888888888743 23699999999999999999888763211 0123455566666666543
No 138
>PLN02408 phospholipase A1
Probab=62.20 E-value=20 Score=36.43 Aligned_cols=64 Identities=13% Similarity=0.048 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCC
Q 013879 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (434)
Q Consensus 166 ~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~id 233 (434)
.+.+++.+-++++.+.+|.. ...++|+|||.||-.+-..|..|.+.-.. ...++-+.-|.|-+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~---~~~V~v~tFGsPRVG 242 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKR---APMVTVISFGGPRVG 242 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCC---CCceEEEEcCCCCcc
Confidence 45667788888888888865 24699999999999999999888764211 012445555555544
No 139
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=62.13 E-value=13 Score=34.73 Aligned_cols=50 Identities=20% Similarity=0.215 Sum_probs=36.6
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhc
Q 013879 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRN 213 (434)
Q Consensus 163 ~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n 213 (434)
+.+..++.+.+.|.+..+..+.- .+++.+.|||.||.++=.....+.+..
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 45667778888887776655433 368999999999999876666666543
No 140
>PRK14566 triosephosphate isomerase; Provisional
Probab=62.01 E-value=22 Score=34.29 Aligned_cols=61 Identities=18% Similarity=0.328 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
.+.|+++..||++++....+.....+=|. |||-.-|.=+..|.... ++.|++||..-+|+.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~-------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP-------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC-------CCCeEEechHhcCHH
Confidence 45578889999998864422212234444 99999999999998864 399999999998874
No 141
>PLN02802 triacylglycerol lipase
Probab=61.97 E-value=17 Score=38.34 Aligned_cols=64 Identities=8% Similarity=0.075 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCC
Q 013879 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (434)
Q Consensus 166 ~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~id 233 (434)
.+.+++..-++.+.+++|.. ...++|+|||.||-.+-..|..|.+.... .+++.-+.-|.|-+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~---~~pV~vyTFGsPRVG 372 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA---APPVAVFSFGGPRVG 372 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC---CCceEEEEcCCCCcc
Confidence 45567778888888877643 23699999999999999999888764321 123455666666554
No 142
>PLN02847 triacylglycerol lipase
Probab=61.95 E-value=15 Score=39.55 Aligned_cols=53 Identities=19% Similarity=0.305 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecC
Q 013879 170 DSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGN 229 (434)
Q Consensus 170 ~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGN 229 (434)
.+...|++-+..+|.| ++.|+|||.||-.+..++..+.++.. .-+++.++.|-
T Consensus 236 ~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~----fssi~CyAFgP 288 (633)
T PLN02847 236 LSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE----FSSTTCVTFAP 288 (633)
T ss_pred HHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC----CCCceEEEecC
Confidence 3334455556678865 69999999999998888766643321 23455666664
No 143
>PF03283 PAE: Pectinacetylesterase
Probab=60.87 E-value=71 Score=32.42 Aligned_cols=148 Identities=18% Similarity=0.179 Sum_probs=71.6
Q ss_pred EEEEEEecCCCCCCCEEEEECCCCChhhhh---hhhhhccCCee-----EcCCC---CccccCCCCcccCcceeEeeCCC
Q 013879 78 FYWFYEAMTRPQEKPLVLWLNGGPGCSSVG---YGATQEIGPFL-----VDTDG---RGLQFNPYAWNKEANMLFLESPI 146 (434)
Q Consensus 78 fy~f~es~~~~~~~Pl~lwlnGGPG~ss~~---~g~~~E~GP~~-----v~~~~---~~l~~n~~sW~~~~n~l~iDqPv 146 (434)
.|++-+. .....+-+||.|.||=.|.+.. ....++.|-.. +..+| ..-..||.-++ .|++||=-=.
T Consensus 38 ~yy~~~g-~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~vpYC~ 114 (361)
T PF03283_consen 38 GYYFRPG-SGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFVPYCD 114 (361)
T ss_pred cEEEccC-CCCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEEEecC
Confidence 3444333 1344567999999998887741 01223444222 11121 11234663222 5777773332
Q ss_pred CcCcCCccCCCCCcccChHHH-HHHHHHHHHHHHHH-CCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeee
Q 013879 147 GVGFSYSNTTNDYEMLGDDFT-ANDSYTFLHKWFLK-FPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKG 224 (434)
Q Consensus 147 g~GfSy~~~~~~~~~~~~~~~-a~~~~~fl~~F~~~-fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkG 224 (434)
|.-|+=..+.......+..-. ...+.++|.....+ +++ ..++.|+|.|-||.-+..-+.+|.+.-.. ...+++
T Consensus 115 Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~---~~~v~~ 189 (361)
T PF03283_consen 115 GDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS---SVKVKC 189 (361)
T ss_pred CccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc---CceEEE
Confidence 433331111010100001111 22233444444444 443 34799999999999888888887765321 244555
Q ss_pred eEecCCCCC
Q 013879 225 ILLGNPETS 233 (434)
Q Consensus 225 i~IGNg~id 233 (434)
+.=..-++|
T Consensus 190 ~~DsG~f~d 198 (361)
T PF03283_consen 190 LSDSGFFLD 198 (361)
T ss_pred ecccccccc
Confidence 444333333
No 144
>PRK14567 triosephosphate isomerase; Provisional
Probab=60.17 E-value=27 Score=33.59 Aligned_cols=61 Identities=20% Similarity=0.248 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
.+.++++..++++++..+-+-....+-|. |||-.-|.=+..|.+.. ++.|++||.+-+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~-------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP-------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC-------CCCEEEeehhhhcHH
Confidence 45678888999998876422112233444 99999999999998863 389999999998874
No 145
>PLN02162 triacylglycerol lipase
Probab=60.00 E-value=11 Score=39.33 Aligned_cols=41 Identities=10% Similarity=0.165 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhh
Q 013879 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (434)
Q Consensus 169 ~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 212 (434)
..+.+.|+.++.++| +.+++++|||.||-.+-..|..+...
T Consensus 262 ~~I~~~L~~lL~k~p---~~kliVTGHSLGGALAtLaAa~L~~~ 302 (475)
T PLN02162 262 YTIRQMLRDKLARNK---NLKYILTGHSLGGALAALFPAILAIH 302 (475)
T ss_pred HHHHHHHHHHHHhCC---CceEEEEecChHHHHHHHHHHHHHHc
Confidence 345566777777777 45799999999999988887766543
No 146
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=59.15 E-value=14 Score=34.85 Aligned_cols=38 Identities=24% Similarity=0.430 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhh
Q 013879 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (434)
Q Consensus 171 ~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 212 (434)
-.++++...+.+++ +++++|||=||..+-+.|..+.+.
T Consensus 71 A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~ 108 (224)
T PF11187_consen 71 ALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDE 108 (224)
T ss_pred HHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHH
Confidence 34566666666653 699999999999999888886554
No 147
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=55.49 E-value=6.5 Score=35.86 Aligned_cols=16 Identities=38% Similarity=0.953 Sum_probs=13.6
Q ss_pred CCCCEEEEECCCCChh
Q 013879 89 QEKPLVLWLNGGPGCS 104 (434)
Q Consensus 89 ~~~Pl~lwlnGGPG~s 104 (434)
.+.|-|||+-|||||-
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 3568999999999984
No 148
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=55.28 E-value=19 Score=32.72 Aligned_cols=65 Identities=17% Similarity=0.159 Sum_probs=41.3
Q ss_pred cCcceeEe--eCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHC-CCCCCCcEEEEeeccCcccchHHHHH
Q 013879 135 KEANMLFL--ESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKF-PSYRRRTFYIAGESYAGRYIPELTEL 208 (434)
Q Consensus 135 ~~~n~l~i--DqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~f-p~~~~~~~~i~GESYgG~yvp~~a~~ 208 (434)
+.|-|.|+ |.|.+...+-. ... --+..|.+|..|++.+=..+ | ...+-++|||||..-+-..+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~--~~~----~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAA--SPG----YARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCcccccc--Cch----HHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 67788888 55522332211 111 13456777888887765555 3 3469999999999887766655
No 149
>COG0627 Predicted esterase [General function prediction only]
Probab=55.00 E-value=32 Score=34.27 Aligned_cols=90 Identities=23% Similarity=0.199 Sum_probs=52.4
Q ss_pred cccCcceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHH-----HHHHHHCCCCCC-CcEEEEeeccCcccchHHH
Q 013879 133 WNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFL-----HKWFLKFPSYRR-RTFYIAGESYAGRYIPELT 206 (434)
Q Consensus 133 W~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl-----~~F~~~fp~~~~-~~~~i~GESYgG~yvp~~a 206 (434)
+....++--|+ |+|.|.|+-.+-..-.. ... ..+...|| ..+.+.||--.+ ..-.|+|+|.||+=+-.+|
T Consensus 95 ~~~~~~~~vv~-p~G~~~sfY~d~~~~~~-~~~--~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA 170 (316)
T COG0627 95 RGAGVNISVVM-PLGGGASFYSDWTQPPW-ASG--PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLA 170 (316)
T ss_pred ccCCCCccccc-cCCCccceecccccCcc-ccC--ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhh
Confidence 44444555555 78999887443221100 111 12233333 244456663321 3689999999999988888
Q ss_pred HHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 207 ELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 207 ~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
.+-.++ ++.++=-.|+++|.
T Consensus 171 ~~~pd~---------f~~~sS~Sg~~~~s 190 (316)
T COG0627 171 LKHPDR---------FKSASSFSGILSPS 190 (316)
T ss_pred hhCcch---------hceecccccccccc
Confidence 666433 67777777777775
No 150
>PLN02310 triacylglycerol lipase
Probab=54.93 E-value=28 Score=35.80 Aligned_cols=64 Identities=9% Similarity=0.045 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHCCCC-CCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCC
Q 013879 166 FTANDSYTFLHKWFLKFPSY-RRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (434)
Q Consensus 166 ~~a~~~~~fl~~F~~~fp~~-~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~id 233 (434)
.+.+++...++...+.+++- ....+.|+|||.||-.+-..|..|.... ..+++.-+.-|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI----PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC----cCcceeEEEecCCCcc
Confidence 34556666777766665431 2346999999999999988887776532 2344566667776654
No 151
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=54.17 E-value=66 Score=34.50 Aligned_cols=85 Identities=9% Similarity=0.030 Sum_probs=49.9
Q ss_pred cceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCC
Q 013879 137 ANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDP 216 (434)
Q Consensus 137 ~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 216 (434)
..++-||-+ |.|.|... .. -++-+.+.+.++|..+.+... ..+++++|+|.||..+...+........
T Consensus 221 f~V~~iDwr-gpg~s~~~----~~--~ddY~~~~i~~al~~v~~~~g---~~kv~lvG~cmGGtl~a~ala~~aa~~~-- 288 (532)
T TIGR01838 221 HTVFVISWR-NPDASQAD----KT--FDDYIRDGVIAALEVVEAITG---EKQVNCVGYCIGGTLLSTALAYLAARGD-- 288 (532)
T ss_pred cEEEEEECC-CCCccccc----CC--hhhhHHHHHHHHHHHHHHhcC---CCCeEEEEECcCcHHHHHHHHHHHHhCC--
Confidence 467777855 77766321 11 112233345566665554333 5689999999999987663332222210
Q ss_pred CceeeeeeeEecCCCCCch
Q 013879 217 SLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 217 ~~~inLkGi~IGNg~idp~ 235 (434)
.-.++++++.+..+|..
T Consensus 289 --~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 --DKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCccceEEEEecCcCCC
Confidence 11278888888777754
No 152
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=52.57 E-value=8.8 Score=35.71 Aligned_cols=46 Identities=15% Similarity=0.234 Sum_probs=34.5
Q ss_pred HHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 176 HKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 176 ~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
-+|++.+|+...+++-|.|-|.||-.+-.+|.+..+ ++.++..||-
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~----------i~avVa~~ps 55 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ----------ISAVVAISPS 55 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS----------EEEEEEES--
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC----------ccEEEEeCCc
Confidence 357789999988899999999999999999988752 6666666653
No 153
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=52.44 E-value=2e+02 Score=28.86 Aligned_cols=130 Identities=22% Similarity=0.298 Sum_probs=70.8
Q ss_pred EEEEEeecCCCeeEEEEEEEecCCCCCCCEEEEECCCCChhhhh-----hhhhhccCCeeEcCCCCccccCCCCcccCcc
Q 013879 64 AGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVG-----YGATQEIGPFLVDTDGRGLQFNPYAWNKEAN 138 (434)
Q Consensus 64 sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~-----~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n 138 (434)
.--|... +.+.-.+.|.-. . .....|++|-++|=-|.|.-. ...+.+-| ..
T Consensus 51 re~v~~p-dg~~~~ldw~~~-p-~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg---------------------~~ 106 (345)
T COG0429 51 RERLETP-DGGFIDLDWSED-P-RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG---------------------WL 106 (345)
T ss_pred eEEEEcC-CCCEEEEeeccC-c-cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC---------------------Ce
Confidence 3345443 345567778432 1 223459999999977776421 22333222 24
Q ss_pred eeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCc
Q 013879 139 MLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSL 218 (434)
Q Consensus 139 ~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~ 218 (434)
++-++-- |-|.+-.....-+.. ... +|+..||..-.+.+| .+++|.+|-|.||.. +|..+.++-+.
T Consensus 107 ~Vv~~~R-gcs~~~n~~p~~yh~-G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgnm---La~ylgeeg~d--- 172 (345)
T COG0429 107 VVVFHFR-GCSGEANTSPRLYHS-GET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGNM---LANYLGEEGDD--- 172 (345)
T ss_pred EEEEecc-cccCCcccCcceecc-cch---hHHHHHHHHHHHhCC---CCceEEEEecccHHH---HHHHHHhhccC---
Confidence 4555533 555553323322321 222 444444443334566 789999999999954 56667665332
Q ss_pred eeeeeeeEecCCC
Q 013879 219 YIDLKGILLGNPE 231 (434)
Q Consensus 219 ~inLkGi~IGNg~ 231 (434)
...-.++++-+|+
T Consensus 173 ~~~~aa~~vs~P~ 185 (345)
T COG0429 173 LPLDAAVAVSAPF 185 (345)
T ss_pred cccceeeeeeCHH
Confidence 2236666666664
No 154
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=52.41 E-value=25 Score=33.46 Aligned_cols=80 Identities=13% Similarity=0.170 Sum_probs=53.2
Q ss_pred cceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCC
Q 013879 137 ANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDP 216 (434)
Q Consensus 137 ~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 216 (434)
..++=|+-| |-|==+... ..+ +.++.|+.+...|+. -+..+|+-++|||+||..+=.+|.++.+.-
T Consensus 34 iel~avqlP-GR~~r~~ep---~~~-di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~g--- 99 (244)
T COG3208 34 IELLAVQLP-GRGDRFGEP---LLT-DIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERAG--- 99 (244)
T ss_pred hheeeecCC-CcccccCCc---ccc-cHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHcC---
Confidence 457778878 777433222 222 677777777665542 345789999999999999999999987752
Q ss_pred CceeeeeeeEecCCCCCc
Q 013879 217 SLYIDLKGILLGNPETST 234 (434)
Q Consensus 217 ~~~inLkGi~IGNg~idp 234 (434)
...+++.| .|.--|
T Consensus 100 ---~~p~~lfi-sg~~aP 113 (244)
T COG3208 100 ---LPPRALFI-SGCRAP 113 (244)
T ss_pred ---CCcceEEE-ecCCCC
Confidence 22555555 444445
No 155
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=51.27 E-value=20 Score=33.37 Aligned_cols=106 Identities=19% Similarity=0.201 Sum_probs=64.9
Q ss_pred CeeEEEEEEEecCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCc
Q 013879 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (434)
Q Consensus 74 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~ 153 (434)
+.+|.|--+.+ -+--||-+-|.-||+-.+++.=.+ + .++ -.. ..++-+| |-|.|-|..
T Consensus 30 g~ql~y~~~G~-----G~~~iLlipGalGs~~tDf~pql~------~-------l~k--~l~-~TivawD-PpGYG~SrP 87 (277)
T KOG2984|consen 30 GTQLGYCKYGH-----GPNYILLIPGALGSYKTDFPPQLL------S-------LFK--PLQ-VTIVAWD-PPGYGTSRP 87 (277)
T ss_pred CceeeeeecCC-----CCceeEecccccccccccCCHHHH------h-------cCC--CCc-eEEEEEC-CCCCCCCCC
Confidence 46677763221 223578889999998876432211 1 111 111 6799999 559999975
Q ss_pred cCCCCCcc---cChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhh
Q 013879 154 NTTNDYEM---LGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (434)
Q Consensus 154 ~~~~~~~~---~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 212 (434)
.+.. +.. ..|.+.|-++.++|. -.+|-|.|-|=||.-+-..|.+-.+.
T Consensus 88 P~Rk-f~~~ff~~Da~~avdLM~aLk----------~~~fsvlGWSdGgiTalivAak~~e~ 138 (277)
T KOG2984|consen 88 PERK-FEVQFFMKDAEYAVDLMEALK----------LEPFSVLGWSDGGITALIVAAKGKEK 138 (277)
T ss_pred Cccc-chHHHHHHhHHHHHHHHHHhC----------CCCeeEeeecCCCeEEEEeeccChhh
Confidence 4432 211 135566666666663 34799999999999877777655443
No 156
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=51.19 E-value=73 Score=31.63 Aligned_cols=89 Identities=18% Similarity=0.131 Sum_probs=57.5
Q ss_pred cCCCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccCh
Q 013879 85 MTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGD 164 (434)
Q Consensus 85 ~~~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~ 164 (434)
..+.+..|-++-++|==|+--. +.-+. .+ |...-. +.+.-||.- -.|.|-.... .+-
T Consensus 46 ~~~~~~~Pp~i~lHGl~GS~~N-w~sv~------k~-----Ls~~l~-----~~v~~vd~R-nHG~Sp~~~~-----h~~ 102 (315)
T KOG2382|consen 46 SENLERAPPAIILHGLLGSKEN-WRSVA------KN-----LSRKLG-----RDVYAVDVR-NHGSSPKITV-----HNY 102 (315)
T ss_pred ccccCCCCceEEecccccCCCC-HHHHH------HH-----hccccc-----CceEEEecc-cCCCCccccc-----cCH
Confidence 3467788999999996665433 33332 01 111101 166777866 8888843322 266
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCc
Q 013879 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAG 199 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG 199 (434)
+..|+|+..|+..+-. .+...+..|.|||.||
T Consensus 103 ~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 103 EAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred HHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 7889998888875432 3456789999999999
No 157
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=50.49 E-value=16 Score=32.63 Aligned_cols=63 Identities=25% Similarity=0.359 Sum_probs=41.8
Q ss_pred CCCCEEEEECCCCChhhhhhhhhhccC----CeeEcCCCCccccCCCC--cccCcceeEeeCCCCcCcCC
Q 013879 89 QEKPLVLWLNGGPGCSSVGYGATQEIG----PFLVDTDGRGLQFNPYA--WNKEANMLFLESPIGVGFSY 152 (434)
Q Consensus 89 ~~~Pl~lwlnGGPG~ss~~~g~~~E~G----P~~v~~~~~~l~~n~~s--W~~~~n~l~iDqPvg~GfSy 152 (434)
+..+|=|.+.|| |||++.|++=.+.- -..+..+|-++.-.+.| +.+-+.|=|+|...|.||-.
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f 144 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVV 144 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEE
Confidence 346799999999 99998544333322 23444455444444443 56667788999999999987
No 158
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=50.43 E-value=1.2e+02 Score=29.34 Aligned_cols=55 Identities=15% Similarity=0.094 Sum_probs=30.5
Q ss_pred HHHHHHHHHH----HHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 168 ANDSYTFLHK----WFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 168 a~~~~~fl~~----F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
|+.+.+||.+ |.+.-=.....+--|+||||||-.+-. .|+++.+. +.-+++++|-
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~---aLL~~p~~------F~~y~~~SPS 171 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLF---ALLTYPDC------FGRYGLISPS 171 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHH---HHhcCcch------hceeeeecch
Confidence 4556666654 333211223345899999999987643 34443222 5555555553
No 159
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=50.34 E-value=21 Score=32.93 Aligned_cols=64 Identities=22% Similarity=0.274 Sum_probs=44.4
Q ss_pred eeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHh
Q 013879 139 MLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (434)
Q Consensus 139 ~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~ 211 (434)
.|-.+=- |||-|-+.-+.+. .+.+.|....+.++ .++|+-. .+.++|-|+|+-.+..+|.+..+
T Consensus 63 tlRfNfR-gVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 63 TLRFNFR-GVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred EEeeccc-ccccccCcccCCc---chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhccc
Confidence 3444434 9999976655443 45666777777777 4788543 36899999999888888877755
No 160
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=48.37 E-value=18 Score=29.50 Aligned_cols=29 Identities=21% Similarity=0.164 Sum_probs=26.9
Q ss_pred CCeEEEEecCCccccCcchHHHHHHhcCC
Q 013879 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGL 415 (434)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w 415 (434)
..+|||.+|..|.++|+.+++...+.|.-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~ 62 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG 62 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC
Confidence 38999999999999999999999999874
No 161
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=48.02 E-value=47 Score=29.97 Aligned_cols=83 Identities=14% Similarity=0.242 Sum_probs=51.1
Q ss_pred ceeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCC-
Q 013879 138 NMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDP- 216 (434)
Q Consensus 138 n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~- 216 (434)
++--|+-|+..+.. .+.. +....+.++...++++..+-| +.++.|+|-|=|+..+-.++.. ....
T Consensus 41 ~~~~V~YpA~~~~~------~y~~-S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~----~~l~~ 106 (179)
T PF01083_consen 41 AVQGVEYPASLGPN------SYGD-SVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG----DGLPP 106 (179)
T ss_dssp EEEE--S---SCGG------SCHH-HHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH----TTSSH
T ss_pred EEEecCCCCCCCcc------cccc-cHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh----ccCCh
Confidence 44446677766652 1222 556677888899999999999 6799999999999887777666 1100
Q ss_pred Cceeeeee-eEecCCCCCc
Q 013879 217 SLYIDLKG-ILLGNPETST 234 (434)
Q Consensus 217 ~~~inLkG-i~IGNg~idp 234 (434)
...=++.+ +.+|||.-.+
T Consensus 107 ~~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 107 DVADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHHHEEEEEEES-TTTBT
T ss_pred hhhhhEEEEEEecCCcccC
Confidence 11123555 6888887643
No 162
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=47.97 E-value=42 Score=31.98 Aligned_cols=66 Identities=18% Similarity=0.184 Sum_probs=37.8
Q ss_pred cceeEeeCCCCcCcCCccCCCCCcccChHHH-HHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHH
Q 013879 137 ANMLFLESPIGVGFSYSNTTNDYEMLGDDFT-ANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTE 207 (434)
Q Consensus 137 ~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~-a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~ 207 (434)
+++|-.|-- |+|=|.......... .-.+- -.|+-..|..-=+.-| ..|+|..||||||+-.=.++.
T Consensus 58 f~Vlt~dyR-G~g~S~p~~~~~~~~-~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 58 FEVLTFDYR-GIGQSRPASLSGSQW-RYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred ceEEEEecc-cccCCCccccccCcc-chhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccccc
Confidence 477888866 888886544332211 22222 2233333332112234 679999999999998665553
No 163
>PLN03037 lipase class 3 family protein; Provisional
Probab=45.61 E-value=46 Score=35.32 Aligned_cols=64 Identities=13% Similarity=0.116 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHCCCC-CCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCC
Q 013879 167 TANDSYTFLHKWFLKFPSY-RRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (434)
Q Consensus 167 ~a~~~~~fl~~F~~~fp~~-~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~id 233 (434)
+.+++..-++...+.+++. ....++|+|||.||-.+-..|..|.+.... ..++.-+.-|.|-+.
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~---~~~VtvyTFGsPRVG 360 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA---LSNISVISFGAPRVG 360 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC---CCCeeEEEecCCCcc
Confidence 3355666677766666642 234699999999999998888888764322 013444555555443
No 164
>PLN02429 triosephosphate isomerase
Probab=45.59 E-value=55 Score=32.52 Aligned_cols=61 Identities=16% Similarity=0.227 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 165 DFTANDSYTFLHKWFLK-FPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~-fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
.+.++.+..++++|+.. +.+-....+-|. |||-.-|.=+..|..+ .++.|++||.+.+++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~-------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE-------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC-------CCCCEEEeecceecHH
Confidence 44577888889888763 432222344444 9999999999999875 3489999999998864
No 165
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=45.51 E-value=50 Score=33.27 Aligned_cols=71 Identities=20% Similarity=0.208 Sum_probs=46.8
Q ss_pred eEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCce
Q 013879 140 LFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLY 219 (434)
Q Consensus 140 l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~ 219 (434)
|=...| |.+=|.+ .-++. ++..+++.+.+|-..=+ .|+..+++|.|-|-||.-+.-.|..-
T Consensus 272 LGwNhP-GFagSTG---~P~p~-n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~Y---------- 332 (517)
T KOG1553|consen 272 LGWNHP-GFAGSTG---LPYPV-NTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASNY---------- 332 (517)
T ss_pred eccCCC-CccccCC---CCCcc-cchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhcC----------
Confidence 333346 5544532 23444 66777777777665422 55678999999999999888877543
Q ss_pred eeeeeeEecC
Q 013879 220 IDLKGILLGN 229 (434)
Q Consensus 220 inLkGi~IGN 229 (434)
.++|++++-.
T Consensus 333 PdVkavvLDA 342 (517)
T KOG1553|consen 333 PDVKAVVLDA 342 (517)
T ss_pred CCceEEEeec
Confidence 4589988843
No 166
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=44.36 E-value=45 Score=33.45 Aligned_cols=57 Identities=14% Similarity=0.194 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 171 ~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
+.+-++.-...+| +-.++++|||-||-.+...|..|...... ...+++=+.-|-|-+
T Consensus 157 ~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~--~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 157 LDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK--TSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC--CCCceEEEEecCCCc
Confidence 3333444445677 55799999999999999999999886432 223455555555543
No 167
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=44.08 E-value=53 Score=31.91 Aligned_cols=94 Identities=21% Similarity=0.314 Sum_probs=55.8
Q ss_pred CCCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcC--cCCccCCCCCcccCh
Q 013879 87 RPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVG--FSYSNTTNDYEMLGD 164 (434)
Q Consensus 87 ~~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~G--fSy~~~~~~~~~~~~ 164 (434)
.++..|+|+|=-=|=.|||..+++|.| +..| ++= .-+.-+| +|-| -|+ + ...
T Consensus 20 s~s~~P~ii~HGigd~c~~~~~~~~~q------------~l~~-~~g---~~v~~le--ig~g~~~s~------l--~pl 73 (296)
T KOG2541|consen 20 SPSPVPVIVWHGIGDSCSSLSMANLTQ------------LLEE-LPG---SPVYCLE--IGDGIKDSS------L--MPL 73 (296)
T ss_pred CcccCCEEEEeccCcccccchHHHHHH------------HHHh-CCC---CeeEEEE--ecCCcchhh------h--ccH
Confidence 355589999977788999865677763 2222 211 1122233 2333 221 1 144
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHh
Q 013879 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~ 211 (434)
.++++.+.+.+. ..|++ ++-.+|.|+|=||..+=+++.....
T Consensus 74 ~~Qv~~~ce~v~----~m~~l-sqGynivg~SQGglv~Raliq~cd~ 115 (296)
T KOG2541|consen 74 WEQVDVACEKVK----QMPEL-SQGYNIVGYSQGGLVARALIQFCDN 115 (296)
T ss_pred HHHHHHHHHHHh----cchhc-cCceEEEEEccccHHHHHHHHhCCC
Confidence 555555555554 45666 4689999999999876666655544
No 168
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=41.70 E-value=35 Score=37.89 Aligned_cols=93 Identities=18% Similarity=0.209 Sum_probs=55.2
Q ss_pred EEEEECCCCChh-------hhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChH
Q 013879 93 LVLWLNGGPGCS-------SVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDD 165 (434)
Q Consensus 93 l~lwlnGGPG~s-------s~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~ 165 (434)
-||++-|--|+- |. ..+-.-.||++=..| .+|+++. +.+ -+| ..=-||- .......
T Consensus 91 PVLFIPGNAGSyKQvRSiAS~-a~n~y~~~~~e~t~~----~d~~~~~-DFF---aVD--FnEe~tA------m~G~~l~ 153 (973)
T KOG3724|consen 91 PVLFIPGNAGSYKQVRSIASV-AQNAYQGGPFEKTED----RDNPFSF-DFF---AVD--FNEEFTA------MHGHILL 153 (973)
T ss_pred eEEEecCCCCchHHHHHHHHH-HhhhhcCCchhhhhc----ccCcccc-ceE---EEc--ccchhhh------hccHhHH
Confidence 367888877752 34 355566899984333 3366655 222 122 0111121 1112567
Q ss_pred HHHHHHHHHHHHHHHHC---CCCC---CCcEEEEeeccCcccc
Q 013879 166 FTANDSYTFLHKWFLKF---PSYR---RRTFYIAGESYAGRYI 202 (434)
Q Consensus 166 ~~a~~~~~fl~~F~~~f---p~~~---~~~~~i~GESYgG~yv 202 (434)
++|+.+.++++..+..+ +||+ ...+.|.||||||..+
T Consensus 154 dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHH
Confidence 78888888877665543 5565 4569999999999764
No 169
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=41.60 E-value=18 Score=32.98 Aligned_cols=34 Identities=24% Similarity=0.229 Sum_probs=29.5
Q ss_pred cCCeEEEEecCCccccCcchHHHHHHhcCCCCCc
Q 013879 386 AGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITK 419 (434)
Q Consensus 386 ~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~ 419 (434)
...+|||.+|+.|.+||...++.+.+.|.-.+..
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~ 176 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKP 176 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999999998755543
No 170
>PLN02561 triosephosphate isomerase
Probab=41.41 E-value=64 Score=31.02 Aligned_cols=60 Identities=20% Similarity=0.274 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHH-HCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCc
Q 013879 165 DFTANDSYTFLHKWFL-KFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~-~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp 234 (434)
.+.++++..++++++. .|..-....+-|. |||-.-|.=+..+... .++.|++||.+-+|+
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~-------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ-------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC-------CCCCeEEEehHhhHH
Confidence 3456778888888775 3433223344444 9999999999999775 449999999999987
No 171
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=40.55 E-value=1.8e+02 Score=30.93 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=22.7
Q ss_pred HHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHH
Q 013879 172 YTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (434)
Q Consensus 172 ~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a 206 (434)
++++++....|-. ..+++-|+|||.||..|-.++
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 3455555555541 235799999999999885544
No 172
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=40.26 E-value=69 Score=30.94 Aligned_cols=39 Identities=21% Similarity=0.272 Sum_probs=27.1
Q ss_pred cEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 189 TFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 189 ~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
++.|+|||=||+-+-.+|....+ ....+++++++..+|.
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~----~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNAS----SSLDLRFSALILLDPV 130 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcc----cccccceeEEEEeccc
Confidence 69999999999955444433321 1235679999997775
No 173
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=39.82 E-value=16 Score=37.27 Aligned_cols=39 Identities=18% Similarity=0.134 Sum_probs=23.3
Q ss_pred CcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCchh
Q 013879 188 RTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAE 236 (434)
Q Consensus 188 ~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~~ 236 (434)
..+.++||||||--+-..+.+- . .++..++-+||.-|..
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~d----~------r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQD----T------RFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-----T------T--EEEEES---TTS-
T ss_pred hheeeeecCchHHHHHHHHhhc----c------CcceEEEeCCcccCCC
Confidence 3599999999997666444332 1 2778888899998854
No 174
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=39.75 E-value=24 Score=36.06 Aligned_cols=42 Identities=7% Similarity=0.059 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHh
Q 013879 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (434)
Q Consensus 166 ~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~ 211 (434)
+.+..+...++.-++. +++++.|.|||+||.++-.+-....+
T Consensus 101 ~~~~~lk~~ie~~~~~----~~~kv~li~HSmGgl~~~~fl~~~~~ 142 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKK----NGKKVVLIAHSMGGLVARYFLQWMPQ 142 (389)
T ss_pred HHHHHHHHHHHHHHHh----cCCcEEEEEeCCCchHHHHHHHhccc
Confidence 3344455555544432 26799999999999998777666643
No 175
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=39.72 E-value=25 Score=31.53 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=28.3
Q ss_pred CCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCC
Q 013879 187 RRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (434)
Q Consensus 187 ~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~id 233 (434)
..+.+|+|||.|+.-+-..+. .+. .-+++|+++..|+-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~--~~~------~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA--EQS------QKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH--HTC------CSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh--hcc------cccccEEEEEcCCCc
Confidence 467999999999987776665 222 345999999999843
No 176
>PRK07868 acyl-CoA synthetase; Validated
Probab=39.09 E-value=1.1e+02 Score=35.36 Aligned_cols=22 Identities=18% Similarity=0.249 Sum_probs=18.5
Q ss_pred CCcEEEEeeccCcccchHHHHH
Q 013879 187 RRTFYIAGESYAGRYIPELTEL 208 (434)
Q Consensus 187 ~~~~~i~GESYgG~yvp~~a~~ 208 (434)
..+++++|+|.||..+-.+|..
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~ 161 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAY 161 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHh
Confidence 3579999999999998877754
No 177
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=39.06 E-value=17 Score=24.85 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=24.4
Q ss_pred CCCCCchhhhhhHHHHHhhcccCCHHHHHHHHh
Q 013879 229 NPETSTAEDWQGLVDYAWSHAVVSDETHKIILR 261 (434)
Q Consensus 229 Ng~idp~~q~~s~~~~a~~~gli~~~~~~~~~~ 261 (434)
.|.+||.+-..--.+=|+..|+||++....+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 377788776555567799999999998887764
No 178
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=39.04 E-value=59 Score=29.88 Aligned_cols=64 Identities=11% Similarity=0.252 Sum_probs=38.7
Q ss_pred CEEEEECCCCChhhhhhhhhh----cc--CCeeEcCCCCccccCCCC--cccCcceeEeeCCCCcCcCCccCC
Q 013879 92 PLVLWLNGGPGCSSVGYGATQ----EI--GPFLVDTDGRGLQFNPYA--WNKEANMLFLESPIGVGFSYSNTT 156 (434)
Q Consensus 92 Pl~lwlnGGPG~ss~~~g~~~----E~--GP~~v~~~~~~l~~n~~s--W~~~~n~l~iDqPvg~GfSy~~~~ 156 (434)
.|=|.+.|| |||++.+++=. |. +-..+..+|-++.-.+.| +.+-+-|=|+|...|.||.+.+..
T Consensus 24 ~LRI~V~~g-GCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NPN 95 (192)
T PRK11190 24 QIRVFVINP-GTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAPN 95 (192)
T ss_pred eEEEEEECC-CcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECCC
Confidence 355556665 88875433322 11 123344444444444444 667788999999999999986553
No 179
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=38.89 E-value=34 Score=30.72 Aligned_cols=29 Identities=17% Similarity=0.327 Sum_probs=24.9
Q ss_pred CCCCCcEEEEeeccCcccchHHHHHHHhh
Q 013879 184 SYRRRTFYIAGESYAGRYIPELTELIHDR 212 (434)
Q Consensus 184 ~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 212 (434)
....-|+.|-|+||||+....+|..+...
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A~ 113 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQAP 113 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcCC
Confidence 56667999999999999999999888653
No 180
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein []. It has subsequently been found in a number of other proteins, such as polynucleotide kinase and 2',3'-cyclic-nucleotide 3'-phosphodiesterase. It appears to function as a kinase domain [, ].; GO: 0005524 ATP binding, 0016301 kinase activity; PDB: 2P5T_H 1GVN_B 3Q8X_D.
Probab=38.74 E-value=21 Score=32.56 Aligned_cols=35 Identities=37% Similarity=0.673 Sum_probs=21.0
Q ss_pred CCCCCEEEEECCCCCh--hhhhhhhhhc-c---CCeeEcCCC
Q 013879 88 PQEKPLVLWLNGGPGC--SSVGYGATQE-I---GPFLVDTDG 123 (434)
Q Consensus 88 ~~~~Pl~lwlnGGPG~--ss~~~g~~~E-~---GP~~v~~~~ 123 (434)
+...|+++.+-|+||| |++ ...+.+ . |...|+.|.
T Consensus 11 ~~~~P~~~i~aG~~GsGKSt~-~~~~~~~~~~~~~v~i~~D~ 51 (199)
T PF06414_consen 11 PQEKPTLIIIAGQPGSGKSTL-ARQLLEEFGGGGIVVIDADE 51 (199)
T ss_dssp --SS-EEEEEES-TTSTTHHH-HHHHHHHT-TT-SEEE-GGG
T ss_pred cccCCEEEEEeCCCCCCHHHH-HHHhhhhccCCCeEEEehHH
Confidence 5678999999999999 777 555555 2 345566653
No 181
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=38.19 E-value=99 Score=29.51 Aligned_cols=59 Identities=20% Similarity=0.370 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHH-CCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 166 FTANDSYTFLHKWFLK-FPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 166 ~~a~~~~~fl~~F~~~-fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
+.+.++..++++++.. +.+ ....+-|. |||-.-|.=+..+.+.. ++.|++||.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~-------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP-------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC-------CCCEEEeehHhhCHH
Confidence 4567788888888753 433 33345444 99999999999998753 389999999998754
No 182
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=37.71 E-value=64 Score=31.91 Aligned_cols=71 Identities=10% Similarity=0.061 Sum_probs=41.3
Q ss_pred ChHHHHHHHHHHHHHHHHHCCC-CCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCchhh
Q 013879 163 GDDFTANDSYTFLHKWFLKFPS-YRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAED 237 (434)
Q Consensus 163 ~~~~~a~~~~~fl~~F~~~fp~-~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~~q 237 (434)
+.+..++++-++++-+-..... +...++.|+|||=|..=+-....+-... ...-.+.|+++-.|.-|.+..
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~----~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPS----PSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT-------CCCEEEEEEEEE---TTST
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCcc----ccccceEEEEEeCCCCChhHh
Confidence 6677777777766654444322 3457899999999998776655443221 124569999999998877643
No 183
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=37.67 E-value=35 Score=30.92 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=30.0
Q ss_pred CCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCC
Q 013879 187 RRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (434)
Q Consensus 187 ~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~ 231 (434)
.+|.||++||.|+.-+...+.++..+ ++|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~---------V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQ---------VAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhc---------cceEEEecCC
Confidence 57899999999998888888777653 8999998874
No 184
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=36.91 E-value=39 Score=27.06 Aligned_cols=16 Identities=19% Similarity=0.520 Sum_probs=13.2
Q ss_pred EEEEECCCCChhhhhhh
Q 013879 93 LVLWLNGGPGCSSVGYG 109 (434)
Q Consensus 93 l~lwlnGGPG~ss~~~g 109 (434)
|=|.+.|| |||++.++
T Consensus 28 LRi~v~~g-GCsG~~Y~ 43 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFN 43 (92)
T ss_pred EEEEEeCC-CccCcccc
Confidence 88889998 99998544
No 185
>COG5510 Predicted small secreted protein [Function unknown]
Probab=36.80 E-value=37 Score=23.21 Aligned_cols=20 Identities=20% Similarity=0.316 Sum_probs=11.9
Q ss_pred hHh-HHHHHHHHHHhhhhhhc
Q 013879 7 MKV-TICLTFCLLNALDVVSA 26 (434)
Q Consensus 7 ~~~-~~~~~~~~~~~~~~~~~ 26 (434)
|++ ++.++.+++.++.++.|
T Consensus 2 mk~t~l~i~~vll~s~llaaC 22 (44)
T COG5510 2 MKKTILLIALVLLASTLLAAC 22 (44)
T ss_pred chHHHHHHHHHHHHHHHHHHh
Confidence 444 44444556667777776
No 186
>COG3596 Predicted GTPase [General function prediction only]
Probab=35.76 E-value=47 Score=32.38 Aligned_cols=59 Identities=22% Similarity=0.326 Sum_probs=36.0
Q ss_pred CCCCEEEEECCCCCh--hhhhhhhhh--ccCCeeEcCCCCccccCCCCcccC--cceeEeeCCCCcCcC
Q 013879 89 QEKPLVLWLNGGPGC--SSVGYGATQ--EIGPFLVDTDGRGLQFNPYAWNKE--ANMLFLESPIGVGFS 151 (434)
Q Consensus 89 ~~~Pl~lwlnGGPG~--ss~~~g~~~--E~GP~~v~~~~~~l~~n~~sW~~~--~n~l~iDqPvg~GfS 151 (434)
+..|+.+.|-|--|| ||+ +-+++ |.=|-....-+ ...-.+.|... -||..+|.| |+|=+
T Consensus 36 ~~~pvnvLi~G~TG~GKSSl-iNALF~~~~~~v~~vg~~--t~~~~~~~~~~~~~~l~lwDtP-G~gdg 100 (296)
T COG3596 36 EKEPVNVLLMGATGAGKSSL-INALFQGEVKEVSKVGVG--TDITTRLRLSYDGENLVLWDTP-GLGDG 100 (296)
T ss_pred ccCceeEEEecCCCCcHHHH-HHHHHhccCceeeecccC--CCchhhHHhhccccceEEecCC-Ccccc
Confidence 457999999996666 998 56555 22233321111 11223334433 689999999 88865
No 187
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.30 E-value=56 Score=33.03 Aligned_cols=120 Identities=15% Similarity=0.333 Sum_probs=65.9
Q ss_pred CCCCEEEEECCCCChhhhhhhhhhccCCeeE----cCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccCh
Q 013879 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLV----DTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGD 164 (434)
Q Consensus 89 ~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v----~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~ 164 (434)
..+-+++++|| +.+=+|=++++. ...+.....=-.||-..+++ +||-|..+ +.
T Consensus 114 ~~k~vlvFvHG--------fNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l--------~~Yn~Dre-------S~ 170 (377)
T COG4782 114 SAKTVLVFVHG--------FNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSL--------LGYNYDRE-------ST 170 (377)
T ss_pred CCCeEEEEEcc--------cCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCee--------eecccchh-------hh
Confidence 56789999998 566666666653 12221222222344433331 12222111 22
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
+....++-.+|+..-+.-| -.++||..||.|.--+-..-..+.-++.. .....++=+++-.|-+|-.
T Consensus 171 ~~Sr~aLe~~lr~La~~~~---~~~I~ilAHSMGtwl~~e~LrQLai~~~~-~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 171 NYSRPALERLLRYLATDKP---VKRIYLLAHSMGTWLLMEALRQLAIRADR-PLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred hhhHHHHHHHHHHHHhCCC---CceEEEEEecchHHHHHHHHHHHhccCCc-chhhhhhheEeeCCCCChh
Confidence 3333344444443333233 45799999999988777766666655432 1445577888888877754
No 188
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=34.55 E-value=54 Score=35.69 Aligned_cols=111 Identities=21% Similarity=0.248 Sum_probs=59.9
Q ss_pred CCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccC----------cceeEeeCCCCcCcCCccCCCC
Q 013879 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKE----------ANMLFLESPIGVGFSYSNTTND 158 (434)
Q Consensus 89 ~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~----------~n~l~iDqPvg~GfSy~~~~~~ 158 (434)
+..|++|.+-||||.- ++.|.++|.+. .-|++||.. |+- ... ..
T Consensus 640 kkYptvl~VYGGP~VQ---------------------lVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~---hRG-lk 693 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQ---------------------LVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSA---HRG-LK 693 (867)
T ss_pred CCCceEEEEcCCCceE---------------------EeeccccceehhhhhhhhhcceEEEEEcCC-Ccc---ccc-hh
Confidence 3479999999999742 34466666554 235889965 432 111 00
Q ss_pred Cc-----ccChHHHHHHHHHHHHHHHHHCCCCCC-CcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 159 YE-----MLGDDFTANDSYTFLHKWFLKFPSYRR-RTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 159 ~~-----~~~~~~~a~~~~~fl~~F~~~fp~~~~-~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
+. ....- .++|-.+.||-.-++.- |.. ..+-|-|-||||-.... .|.+. ++| ++-.+-|.|.+
T Consensus 694 FE~~ik~kmGqV-E~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLSlm---~L~~~-----P~I-frvAIAGapVT 762 (867)
T KOG2281|consen 694 FESHIKKKMGQV-EVEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSLM---GLAQY-----PNI-FRVAIAGAPVT 762 (867)
T ss_pred hHHHHhhccCee-eehhhHHHHHHHHHhcC-cccchheeEeccccccHHHHH---HhhcC-----cce-eeEEeccCcce
Confidence 00 00100 12223333443333332 333 35999999999964322 22232 222 77778888888
Q ss_pred Cchh
Q 013879 233 STAE 236 (434)
Q Consensus 233 dp~~ 236 (434)
+...
T Consensus 763 ~W~~ 766 (867)
T KOG2281|consen 763 DWRL 766 (867)
T ss_pred eeee
Confidence 8764
No 189
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=33.25 E-value=1.3e+02 Score=29.45 Aligned_cols=67 Identities=15% Similarity=0.057 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHCCC--C-CCCcEEEEeeccCcccchHHHHHHHhhcCCCCceee--eeeeEecCCCCCch
Q 013879 165 DFTANDSYTFLHKWFLKFPS--Y-RRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYID--LKGILLGNPETSTA 235 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~--~-~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~in--LkGi~IGNg~idp~ 235 (434)
...|..+++.++.-.+..+. + .+.++.++|.|=||+=. ..|.++...= .+.++ |.|.++|.+..|..
T Consensus 45 ~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~Y---ApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 45 RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPSY---APELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHHh---CcccccceeEEeccCCccCHH
Confidence 34455555555554333332 2 35689999999998765 3444443321 35688 99999999887754
No 190
>PTZ00333 triosephosphate isomerase; Provisional
Probab=32.38 E-value=1e+02 Score=29.60 Aligned_cols=60 Identities=20% Similarity=0.329 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHH-HCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCc
Q 013879 165 DFTANDSYTFLHKWFL-KFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~-~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp 234 (434)
.+.++++..++++++. .+.......+-|. |||-.-|.=+..+... .++.|++||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~-------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ-------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC-------CCCCEEEEehHhhhh
Confidence 4557788888888775 3433222334444 9999999999999775 349999999998874
No 191
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=32.38 E-value=21 Score=36.34 Aligned_cols=59 Identities=27% Similarity=0.452 Sum_probs=34.9
Q ss_pred CCCCEEEEECCCCCh--hhhhhhhhhccCCeeEc--CCC---CccccCCCCcccCcceeEeeCCCCcC
Q 013879 89 QEKPLVLWLNGGPGC--SSVGYGATQEIGPFLVD--TDG---RGLQFNPYAWNKEANMLFLESPIGVG 149 (434)
Q Consensus 89 ~~~Pl~lwlnGGPG~--ss~~~g~~~E~GP~~v~--~~~---~~l~~n~~sW~~~~n~l~iDqPvg~G 149 (434)
++.|+=|=+.|.+|+ ||+ +-+|-.+|+=.-. +.| .+....+|.=-++.|+.++|-| |+|
T Consensus 32 ~~~~l~IaV~G~sGsGKSSf-INalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 32 DNAPLNIAVTGESGSGKSSF-INALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp HH--EEEEEEESTTSSHHHH-HHHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred hcCceEEEEECCCCCCHHHH-HHHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 456888889998877 899 8888877762110 001 2344566666788999999999 887
No 192
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=32.25 E-value=59 Score=31.79 Aligned_cols=121 Identities=16% Similarity=0.231 Sum_probs=64.1
Q ss_pred CCCEEEEECCCCCh--hh-hhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHH
Q 013879 90 EKPLVLWLNGGPGC--SS-VGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDF 166 (434)
Q Consensus 90 ~~Pl~lwlnGGPG~--ss-~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~ 166 (434)
++|.+|=.+- =|+ -| . -++|. . | .-....+++-++-||.| |-..--..-..++..-+.++
T Consensus 22 ~kp~ilT~HD-vGlNh~scF-~~ff~-~-~------------~m~~i~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yPsmd~ 84 (283)
T PF03096_consen 22 NKPAILTYHD-VGLNHKSCF-QGFFN-F-E------------DMQEILQNFCIYHIDAP-GQEEGAATLPEGYQYPSMDQ 84 (283)
T ss_dssp TS-EEEEE---TT--HHHHC-HHHHC-S-H------------HHHHHHTTSEEEEEE-T-TTSTT-----TT-----HHH
T ss_pred CCceEEEecc-ccccchHHH-HHHhc-c-h------------hHHHHhhceEEEEEeCC-CCCCCcccccccccccCHHH
Confidence 7899999987 254 34 3 23332 1 1 11223466789999988 76654333334433337889
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCchhhhhhHHHHHh
Q 013879 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAEDWQGLVDYAW 246 (434)
Q Consensus 167 ~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~~q~~s~~~~a~ 246 (434)
.|+++...|..| .+ +.++-+|+--|+.....+|..-.+. +-|+++.|+... ..++.++++
T Consensus 85 LAe~l~~Vl~~f-----~l--k~vIg~GvGAGAnIL~rfAl~~p~~---------V~GLiLvn~~~~----~~gw~Ew~~ 144 (283)
T PF03096_consen 85 LAEMLPEVLDHF-----GL--KSVIGFGVGAGANILARFALKHPER---------VLGLILVNPTCT----AAGWMEWFY 144 (283)
T ss_dssp HHCTHHHHHHHH-----T-----EEEEEETHHHHHHHHHHHHSGGG---------EEEEEEES---S-------HHHHHH
T ss_pred HHHHHHHHHHhC-----Cc--cEEEEEeeccchhhhhhccccCccc---------eeEEEEEecCCC----CccHHHHHH
Confidence 999988888754 22 4588899988888777777544333 889999776533 345555554
Q ss_pred h
Q 013879 247 S 247 (434)
Q Consensus 247 ~ 247 (434)
.
T Consensus 145 ~ 145 (283)
T PF03096_consen 145 Q 145 (283)
T ss_dssp H
T ss_pred H
Confidence 3
No 193
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=32.23 E-value=1.4e+02 Score=28.63 Aligned_cols=60 Identities=17% Similarity=0.267 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHH-HCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 165 DFTANDSYTFLHKWFL-KFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~-~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
.+.++.+..|+++++. .+. -....+-|. |||-.-|.=+..+... .++.|++||.+.+++.
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~-------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ-------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC-------CCCCEEEEeeeeechH
Confidence 3457778888888775 333 112334444 9999999999999875 4489999999998764
No 194
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=31.25 E-value=36 Score=36.78 Aligned_cols=22 Identities=9% Similarity=0.132 Sum_probs=18.5
Q ss_pred CCcEEEEeeccCcccchHHHHH
Q 013879 187 RRTFYIAGESYAGRYIPELTEL 208 (434)
Q Consensus 187 ~~~~~i~GESYgG~yvp~~a~~ 208 (434)
++++.|+|||+||.++-.|-..
T Consensus 212 gkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHh
Confidence 5789999999999888777654
No 195
>PRK13604 luxD acyl transferase; Provisional
Probab=31.05 E-value=56 Score=32.40 Aligned_cols=28 Identities=14% Similarity=0.200 Sum_probs=26.1
Q ss_pred CCeEEEEecCCccccCcchHHHHHHhcC
Q 013879 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLG 414 (434)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~ 414 (434)
+.+||+++|+.|..||..+++...++++
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~ 229 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIR 229 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhc
Confidence 5899999999999999999999999875
No 196
>PRK14565 triosephosphate isomerase; Provisional
Probab=30.42 E-value=1.2e+02 Score=28.80 Aligned_cols=54 Identities=15% Similarity=0.258 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCchh
Q 013879 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAE 236 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~~ 236 (434)
.+.++....+++++. .++-|. |||-.-|.-+..+.++ -++.|++||.+.+++..
T Consensus 173 ~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~-------~~iDG~LvG~asl~~~~ 226 (237)
T PRK14565 173 NDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI-------NQLSGVLVGSASLDVDS 226 (237)
T ss_pred HHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC-------CCCCEEEEechhhcHHH
Confidence 445777888888752 123333 9999999999999874 23999999999998753
No 197
>PRK09504 sufA iron-sulfur cluster assembly scaffold protein; Provisional
Probab=29.58 E-value=48 Score=28.00 Aligned_cols=64 Identities=19% Similarity=0.307 Sum_probs=36.9
Q ss_pred CCEEEEECCCCChhhhhhhh--hhccCCe--eEcCCCCccccCC--CCcccCcceeEeeCCCCcCcCCccC
Q 013879 91 KPLVLWLNGGPGCSSVGYGA--TQEIGPF--LVDTDGRGLQFNP--YAWNKEANMLFLESPIGVGFSYSNT 155 (434)
Q Consensus 91 ~Pl~lwlnGGPG~ss~~~g~--~~E~GP~--~v~~~~~~l~~n~--~sW~~~~n~l~iDqPvg~GfSy~~~ 155 (434)
..|=|-+.|| |||++.+++ -.|.+|- .+..++..+.-.+ -.+.+-+.|=|+|.+.|.||-+.+.
T Consensus 39 ~~LRi~v~~g-GCsG~~Y~~~l~~e~~~~D~v~e~~g~~v~Id~~s~~~L~g~~IDy~~~~~~~gF~f~NP 108 (122)
T PRK09504 39 KGVRLGVKQT-GCAGFGYVLDSVSEPDKDDLVFEHDGAKLFVPLQAMPFIDGTEVDYVREGLNQIFKFHNP 108 (122)
T ss_pred ceEEEEEECC-CCCceEEEeeecCCCCCCCEEEEeCCEEEEEcHHHHHhhCCcEEEeecCCCcceEEEECC
Confidence 3566777665 888764433 2333332 2333333333333 2356667788889999999987543
No 198
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=29.06 E-value=1.4e+02 Score=28.03 Aligned_cols=47 Identities=17% Similarity=0.107 Sum_probs=31.2
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCC-CcEEEEeeccCcccchHHHHHHHhh
Q 013879 163 GDDFTANDSYTFLHKWFLKFPSYRR-RTFYIAGESYAGRYIPELTELIHDR 212 (434)
Q Consensus 163 ~~~~~a~~~~~fl~~F~~~fp~~~~-~~~~i~GESYgG~yvp~~a~~i~~~ 212 (434)
+++.+++.+.+.+.+.+..-++-.- ..+.-+| ||||+|.+...+++.
T Consensus 105 ~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 105 NDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp T-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 6788888888888887776553321 3455566 899999999988874
No 199
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=28.94 E-value=1.7e+02 Score=28.91 Aligned_cols=122 Identities=16% Similarity=0.188 Sum_probs=72.2
Q ss_pred CCCEEEEECCCCChhhhh--hhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHH
Q 013879 90 EKPLVLWLNGGPGCSSVG--YGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFT 167 (434)
Q Consensus 90 ~~Pl~lwlnGGPG~ss~~--~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~ 167 (434)
++|.+|=.+. =|+-... .++|. =| + --+...++-+.-||.| |--.--..-..++..-+.++.
T Consensus 45 ~kpaiiTyhD-lglN~~scFq~ff~--~p-----~-------m~ei~~~fcv~HV~~P-Gqe~gAp~~p~~y~yPsmd~L 108 (326)
T KOG2931|consen 45 NKPAIITYHD-LGLNHKSCFQGFFN--FP-----D-------MAEILEHFCVYHVDAP-GQEDGAPSFPEGYPYPSMDDL 108 (326)
T ss_pred CCceEEEecc-cccchHhHhHHhhc--CH-----h-------HHHHHhheEEEecCCC-ccccCCccCCCCCCCCCHHHH
Confidence 6788887776 4664431 23332 01 1 1223455788999988 543332222233332378899
Q ss_pred HHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCchhhhhhHHHHHhh
Q 013879 168 ANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAEDWQGLVDYAWS 247 (434)
Q Consensus 168 a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~~q~~s~~~~a~~ 247 (434)
|+++...|+-| .+ +-++=+|+--|......+|..-.++ +-|+++.|..- ...+|.++++.
T Consensus 109 Ad~l~~VL~~f-----~l--k~vIg~GvGAGAyIL~rFAl~hp~r---------V~GLvLIn~~~----~a~gwiew~~~ 168 (326)
T KOG2931|consen 109 ADMLPEVLDHF-----GL--KSVIGMGVGAGAYILARFALNHPER---------VLGLVLINCDP----CAKGWIEWAYN 168 (326)
T ss_pred HHHHHHHHHhc-----Cc--ceEEEecccccHHHHHHHHhcChhh---------eeEEEEEecCC----CCchHHHHHHH
Confidence 99999888743 22 3466689987777777777555443 78999987542 23455555543
No 200
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=28.23 E-value=35 Score=22.49 Aligned_cols=11 Identities=36% Similarity=1.114 Sum_probs=5.9
Q ss_pred CEEEEECCCCC
Q 013879 92 PLVLWLNGGPG 102 (434)
Q Consensus 92 Pl~lwlnGGPG 102 (434)
--.||++|-||
T Consensus 25 gRTiWFqGdPG 35 (39)
T PF09292_consen 25 GRTIWFQGDPG 35 (39)
T ss_dssp S-EEEESS---
T ss_pred CCEEEeeCCCC
Confidence 45799999888
No 201
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=28.16 E-value=54 Score=30.81 Aligned_cols=26 Identities=15% Similarity=0.244 Sum_probs=21.6
Q ss_pred CCeEEEEecCCccccCcchHHHHHHh
Q 013879 387 GLRIWIYSGDTDGRVPVLSTRYCLNS 412 (434)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~ 412 (434)
+++++|++|+.|..|+....++.+++
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q 194 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQ 194 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHH
Confidence 46789999999999998877776654
No 202
>TIGR03341 YhgI_GntY IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization.
Probab=28.05 E-value=1.2e+02 Score=27.90 Aligned_cols=64 Identities=11% Similarity=0.239 Sum_probs=39.9
Q ss_pred CEEEEECCCCChhhhhhhhh----hccCC--eeEcCCCCccccCC--CCcccCcceeEeeCCCCcCcCCccCC
Q 013879 92 PLVLWLNGGPGCSSVGYGAT----QEIGP--FLVDTDGRGLQFNP--YAWNKEANMLFLESPIGVGFSYSNTT 156 (434)
Q Consensus 92 Pl~lwlnGGPG~ss~~~g~~----~E~GP--~~v~~~~~~l~~n~--~sW~~~~n~l~iDqPvg~GfSy~~~~ 156 (434)
.|=|.+.|| |||++.+++= .|..+ ..+..+|-++.-.+ ..+.+-+-|=|++...|.||.+.+..
T Consensus 23 ~LRv~V~~g-GCsG~~Y~l~~~~~~~~~~~D~v~e~~g~~v~Vd~~s~~~L~g~~IDyve~~~g~gF~f~NPn 94 (190)
T TIGR03341 23 GIRVFVVNP-GTPYAECCVSYCPPDEVEPSDIKLEFNGFSAYVDALSAPFLEDAVIDFVTDRMGGQLTLKAPN 94 (190)
T ss_pred eEEEEEECC-ccCCceeeeEEcccCCCCCCCEEEEeCCEEEEEccchhhHhCCCEEEEeecCCCceeEEeCCc
Confidence 466777775 8887644431 22222 33344444444334 44778888999999999999986653
No 203
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=27.84 E-value=49 Score=28.33 Aligned_cols=17 Identities=41% Similarity=0.600 Sum_probs=14.6
Q ss_pred CCCCCEEEEECCCCChh
Q 013879 88 PQEKPLVLWLNGGPGCS 104 (434)
Q Consensus 88 ~~~~Pl~lwlnGGPG~s 104 (434)
..++||||-++|.||+-
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 45779999999999984
No 204
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=27.75 E-value=62 Score=22.70 Aligned_cols=21 Identities=24% Similarity=0.263 Sum_probs=12.1
Q ss_pred hhHhHHHHHHH-HHHhhhhhhc
Q 013879 6 EMKVTICLTFC-LLNALDVVSA 26 (434)
Q Consensus 6 ~~~~~~~~~~~-~~~~~~~~~~ 26 (434)
||+|++.+.++ ++.++.++.|
T Consensus 1 MmKk~i~~i~~~l~~~~~l~~C 22 (48)
T PRK10081 1 MVKKTIAAIFSVLVLSTVLTAC 22 (48)
T ss_pred ChHHHHHHHHHHHHHHHHHhhh
Confidence 57777766444 4444555555
No 205
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=27.57 E-value=60 Score=32.39 Aligned_cols=69 Identities=19% Similarity=0.291 Sum_probs=40.2
Q ss_pred CcceeEeeCCCCcC-cCCccC----------CCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchH
Q 013879 136 EANMLFLESPIGVG-FSYSNT----------TNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPE 204 (434)
Q Consensus 136 ~~n~l~iDqPvg~G-fSy~~~----------~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~ 204 (434)
..-|+|-|+-|||| |--.-+ ...+.. +..+-...-|.||..-|+ | ...+|++|-|=|..-+=.
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~-gL~~nI~~AYrFL~~~ye--p---GD~Iy~FGFSRGAf~aRV 138 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQ-GLVQNIREAYRFLIFNYE--P---GDEIYAFGFSRGAFSARV 138 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHH-HHHHHHHHHHHHHHHhcC--C---CCeEEEeeccchhHHHHH
Confidence 44689999888876 221100 001111 334444556677765332 3 457999999998776666
Q ss_pred HHHHHH
Q 013879 205 LTELIH 210 (434)
Q Consensus 205 ~a~~i~ 210 (434)
+|..|-
T Consensus 139 lagmir 144 (423)
T COG3673 139 LAGMIR 144 (423)
T ss_pred HHHHHH
Confidence 665553
No 206
>cd00412 pyrophosphatase Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers.
Probab=27.42 E-value=2.2e+02 Score=25.25 Aligned_cols=45 Identities=11% Similarity=-0.007 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhh
Q 013879 164 DDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (434)
Q Consensus 164 ~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 212 (434)
.++....+.+-++.||+.+..+.+.+..-+ +|..-+.-|.+++++
T Consensus 108 l~Dl~~~~l~~I~~fF~~YK~le~~k~~~~----~g~~~~~~A~~~I~~ 152 (155)
T cd00412 108 ISDVPPHLLDEIKHFFEHYKDLEGKKEVKV----AGWKDKEEALKIIKE 152 (155)
T ss_pred hHHCCHHHHHHHHHHHHHhcccCCCCceEE----CcCcCHHHHHHHHHH
Confidence 344556788899999999988875443222 377778888888764
No 207
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=27.34 E-value=65 Score=23.32 Aligned_cols=15 Identities=33% Similarity=0.598 Sum_probs=11.6
Q ss_pred ceeEeeCCCCcCcCCc
Q 013879 138 NMLFLESPIGVGFSYS 153 (434)
Q Consensus 138 n~l~iDqPvg~GfSy~ 153 (434)
..+-+.-| |+|+||.
T Consensus 40 ~~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 40 RRTTVGIP-GTGLSYR 54 (55)
T ss_pred cEEEEEcC-CCccEEe
Confidence 34677888 9999984
No 208
>COG0400 Predicted esterase [General function prediction only]
Probab=26.84 E-value=50 Score=30.71 Aligned_cols=41 Identities=24% Similarity=0.227 Sum_probs=34.2
Q ss_pred cCCeEEEEecCCccccCcchHHHHHHhcCCCCCccccccee
Q 013879 386 AGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYH 426 (434)
Q Consensus 386 ~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~W~~ 426 (434)
.+.+|++.+|..|.+||..-+++..+.|.=.|.+-+.-|+.
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~ 185 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE 185 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 47999999999999999999999888887677776656653
No 209
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=26.49 E-value=36 Score=23.08 Aligned_cols=18 Identities=22% Similarity=0.023 Sum_probs=14.7
Q ss_pred hHHHHhhCcHHHHhHccC
Q 013879 332 NYAKAFYNRLDVQKALHV 349 (434)
Q Consensus 332 ~~~~~ylN~~~Vr~aL~v 349 (434)
-.+-.-|++||||++|++
T Consensus 14 ~gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 14 FGLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHHcCHHHHHHHHH
Confidence 345567999999999986
No 210
>PRK09502 iscA iron-sulfur cluster assembly protein; Provisional
Probab=26.26 E-value=69 Score=26.25 Aligned_cols=63 Identities=21% Similarity=0.433 Sum_probs=36.2
Q ss_pred CEEEEECCCCChhhhhhhhh--hccCC--eeEcCCCCcccc--CCCCcccCcceeEeeCCCCcCcCCccC
Q 013879 92 PLVLWLNGGPGCSSVGYGAT--QEIGP--FLVDTDGRGLQF--NPYAWNKEANMLFLESPIGVGFSYSNT 155 (434)
Q Consensus 92 Pl~lwlnGGPG~ss~~~g~~--~E~GP--~~v~~~~~~l~~--n~~sW~~~~n~l~iDqPvg~GfSy~~~ 155 (434)
.|=|.+.+| |||++.+.+- .|..+ ..+..++-++.- ....+.+-+-|=|+|.+.|.||...+.
T Consensus 25 ~LRi~v~~~-GCsG~~Y~l~~~~~~~~~D~~~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~f~NP 93 (107)
T PRK09502 25 GLRLGVRTS-GCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNP 93 (107)
T ss_pred eEEEEEECC-CcCCeeeEeeecCCCCCCCEEEEcCCeEEEEeHHHHhHhCCCEEEEeeCCCCceEEEECC
Confidence 455666654 8887633322 33333 223333333332 234466777889999999999987543
No 211
>PRK06762 hypothetical protein; Provisional
Probab=26.07 E-value=39 Score=29.56 Aligned_cols=21 Identities=19% Similarity=0.420 Sum_probs=15.5
Q ss_pred CEEEEECCCCCh--hhhhhhhhhc
Q 013879 92 PLVLWLNGGPGC--SSVGYGATQE 113 (434)
Q Consensus 92 Pl~lwlnGGPG~--ss~~~g~~~E 113 (434)
|.+||+.|.||| |.+ -..+.+
T Consensus 2 ~~li~i~G~~GsGKST~-A~~L~~ 24 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTI-AKQLQE 24 (166)
T ss_pred CeEEEEECCCCCCHHHH-HHHHHH
Confidence 789999999999 555 344433
No 212
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=25.88 E-value=58 Score=26.99 Aligned_cols=30 Identities=20% Similarity=0.300 Sum_probs=26.0
Q ss_pred HcCCeEEEEecCCccccCcchHHHHHHhcC
Q 013879 385 EAGLRIWIYSGDTDGRVPVLSTRYCLNSLG 414 (434)
Q Consensus 385 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~ 414 (434)
...++|++.+|+.|.+++....+.+.++++
T Consensus 102 ~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~ 131 (145)
T PF12695_consen 102 KIRIPVLFIHGENDPLVPPEQVRRLYEALP 131 (145)
T ss_dssp TTTSEEEEEEETT-SSSHHHHHHHHHHHHC
T ss_pred ccCCcEEEEEECCCCcCCHHHHHHHHHHcC
Confidence 456799999999999999999999888888
No 213
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=25.76 E-value=1.2e+02 Score=20.18 Aligned_cols=28 Identities=18% Similarity=0.404 Sum_probs=13.7
Q ss_pred eeEEEEEEEecCCCCCCCEEEEECCCCC
Q 013879 75 RALFYWFYEAMTRPQEKPLVLWLNGGPG 102 (434)
Q Consensus 75 ~~lfy~f~es~~~~~~~Pl~lwlnGGPG 102 (434)
.+-+|||-.+........--+|+.+||+
T Consensus 11 ~NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 11 GNRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred CceEEEEecccccCCCCCceEEEEeCCC
Confidence 3456666444433333344555555564
No 214
>TIGR03598 GTPase_YsxC ribosome biogenesis GTP-binding protein YsxC/EngB. Members of this protein family are a GTPase associated with ribosome biogenesis, typified by YsxC from Bacillus subutilis. The family is widely but not universally distributed among bacteria. Members commonly are called EngB based on homology to EngA, one of several other GTPases of ribosome biogenesis. Cutoffs as set find essentially all bacterial members, but also identify large numbers of eukaryotic (probably organellar) sequences. This protein is found in about 80 percent of bacterial genomes.
Probab=25.71 E-value=2.2e+02 Score=25.03 Aligned_cols=60 Identities=20% Similarity=0.304 Sum_probs=33.3
Q ss_pred CCCCCEEEEECCCCCh--hhhhhhhhhccC-CeeEcCC-CCccccCCCCcccCcceeEeeCCCCcCcC
Q 013879 88 PQEKPLVLWLNGGPGC--SSVGYGATQEIG-PFLVDTD-GRGLQFNPYAWNKEANMLFLESPIGVGFS 151 (434)
Q Consensus 88 ~~~~Pl~lwlnGGPG~--ss~~~g~~~E~G-P~~v~~~-~~~l~~n~~sW~~~~n~l~iDqPvg~GfS 151 (434)
|.....-+-+-|.||+ ||+ +-.+.... .-.+... +.+...+.+.++ -++.++|.| |.|.+
T Consensus 14 ~~~~~~~i~ivG~~~~GKStl-in~l~~~~~~~~~~~~~~~t~~~~~~~~~--~~~~liDtp-G~~~~ 77 (179)
T TIGR03598 14 PPDDGPEIAFAGRSNVGKSSL-INALTNRKKLARTSKTPGRTQLINFFEVN--DGFRLVDLP-GYGYA 77 (179)
T ss_pred CCCCCCEEEEEcCCCCCHHHH-HHHHhCCCCcccccCCCCcceEEEEEEeC--CcEEEEeCC-CCccc
Confidence 5566677788888887 788 67665432 2111111 111111222222 268999999 87665
No 215
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=25.52 E-value=2.2e+02 Score=29.57 Aligned_cols=90 Identities=21% Similarity=0.238 Sum_probs=60.1
Q ss_pred CCCCCEEEEECCCCChhhhhhhhhhccCCeeEcCCCCccccCCCCcccCcceeEeeCCCCcCcCCccCCCCCcccChHHH
Q 013879 88 PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFT 167 (434)
Q Consensus 88 ~~~~Pl~lwlnGGPG~ss~~~g~~~E~GP~~v~~~~~~l~~n~~sW~~~~n~l~iDqPvg~GfSy~~~~~~~~~~~~~~~ 167 (434)
..++|+|+...| +++-. .|.+- +-+=.=.+|.|+||.- =.|=|.... .+....+..++
T Consensus 60 ~~drPtV~~T~G--------Y~~~~--~p~r~----------Ept~Lld~NQl~vEhR-fF~~SrP~p-~DW~~Lti~QA 117 (448)
T PF05576_consen 60 DFDRPTVLYTEG--------YNVST--SPRRS----------EPTQLLDGNQLSVEHR-FFGPSRPEP-ADWSYLTIWQA 117 (448)
T ss_pred CCCCCeEEEecC--------ccccc--Ccccc----------chhHhhccceEEEEEe-eccCCCCCC-CCcccccHhHh
Confidence 457799999887 22211 23221 1111224699999987 444465433 35555689999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccch
Q 013879 168 ANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIP 203 (434)
Q Consensus 168 a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp 203 (434)
|.|..+..+.|=..+| .++.-+|-|=||+-.-
T Consensus 118 A~D~Hri~~A~K~iY~----~kWISTG~SKGGmTa~ 149 (448)
T PF05576_consen 118 ASDQHRIVQAFKPIYP----GKWISTGGSKGGMTAV 149 (448)
T ss_pred hHHHHHHHHHHHhhcc----CCceecCcCCCceeEE
Confidence 9999999988866565 4788999999998643
No 216
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=25.16 E-value=70 Score=31.32 Aligned_cols=30 Identities=10% Similarity=0.040 Sum_probs=26.8
Q ss_pred CCeEEEEecCCccccCcchHHHHHHhcCCC
Q 013879 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLS 416 (434)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~ 416 (434)
.++|||.+|+.|.+||....+.+.+.+..+
T Consensus 251 ~~PvLii~G~~D~ivp~~~~~~l~~~i~~~ 280 (330)
T PLN02298 251 SIPFIVLHGSADVVTDPDVSRALYEEAKSE 280 (330)
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHhccC
Confidence 689999999999999999999998887644
No 217
>cd01853 Toc34_like Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts). This family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.
Probab=24.97 E-value=4.6e+02 Score=24.95 Aligned_cols=61 Identities=13% Similarity=0.077 Sum_probs=35.3
Q ss_pred CCCCCEEEEECCCCCh--hhhhhhhhhccCCeeEcCC-CCc--cccCCCCcccCcceeEeeCCCCcCcC
Q 013879 88 PQEKPLVLWLNGGPGC--SSVGYGATQEIGPFLVDTD-GRG--LQFNPYAWNKEANMLFLESPIGVGFS 151 (434)
Q Consensus 88 ~~~~Pl~lwlnGGPG~--ss~~~g~~~E~GP~~v~~~-~~~--l~~n~~sW~~~~n~l~iDqPvg~GfS 151 (434)
..+.|+-|.|-|-+|+ ||+ +-.+..-.-+.+..- +.+ ...-...|. -..+.+||.| |.+.+
T Consensus 27 ~~~~~~~IllvG~tGvGKSSl-iNaLlg~~~~~v~~~~~~T~~~~~~~~~~~-g~~i~vIDTP-Gl~~~ 92 (249)
T cd01853 27 ELDFSLTILVLGKTGVGKSST-INSIFGERKAATSAFQSETLRVREVSGTVD-GFKLNIIDTP-GLLES 92 (249)
T ss_pred hccCCeEEEEECCCCCcHHHH-HHHHhCCCCcccCCCCCceEEEEEEEEEEC-CeEEEEEECC-CcCcc
Confidence 4567899999999988 888 565554332222211 111 111122233 3568999999 76644
No 218
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=24.88 E-value=61 Score=31.69 Aligned_cols=31 Identities=23% Similarity=0.266 Sum_probs=28.4
Q ss_pred CCeEEEEecCCccccCcchHHHHHHhcCCCC
Q 013879 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSI 417 (434)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~ 417 (434)
..+|+||+|..|-++|+..++..++++-=.|
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G 249 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAG 249 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcC
Confidence 5799999999999999999999999987666
No 219
>PF03032 Brevenin: Brevenin/esculentin/gaegurin/rugosin family; InterPro: IPR004275 In addition to the highly specific cell-mediated immune system, vertebrates possess an efficient host-defence mechanism against invading microorganisms which involves the synthesis of highly potent antimicrobial peptides with a large spectrum of activity. This entry represents a number of these defence peptides secreted from the skin of amphibians, including the opiate-like dermorphins and deltorphins, and the antimicrobial dermoseptins and temporins.; GO: 0006952 defense response, 0042742 defense response to bacterium, 0005576 extracellular region
Probab=24.10 E-value=50 Score=22.97 Aligned_cols=23 Identities=22% Similarity=0.452 Sum_probs=16.0
Q ss_pred hhhHhHHHHHHHHHHhhhhhhcCc
Q 013879 5 FEMKVTICLTFCLLNALDVVSAKP 28 (434)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~ 28 (434)
|.|+++++|.|.+ +.++++.|..
T Consensus 1 ftlKKsllLlffl-G~ISlSlCee 23 (46)
T PF03032_consen 1 FTLKKSLLLLFFL-GTISLSLCEE 23 (46)
T ss_pred CcchHHHHHHHHH-HHcccchHHH
Confidence 5688988886654 6667666644
No 220
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=24.00 E-value=37 Score=33.24 Aligned_cols=34 Identities=18% Similarity=0.148 Sum_probs=22.4
Q ss_pred HHHHHHHHHCCCCCCCcEEEEeeccCcccchHHH
Q 013879 173 TFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (434)
Q Consensus 173 ~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a 206 (434)
+.|..|......|....+.++|||-||..+..+.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG 294 (425)
T KOG4540|consen 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLG 294 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhc
Confidence 4444444444455577899999999997654443
No 221
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=24.00 E-value=37 Score=33.24 Aligned_cols=34 Identities=18% Similarity=0.148 Sum_probs=22.4
Q ss_pred HHHHHHHHHCCCCCCCcEEEEeeccCcccchHHH
Q 013879 173 TFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (434)
Q Consensus 173 ~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a 206 (434)
+.|..|......|....+.++|||-||..+..+.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG 294 (425)
T COG5153 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLG 294 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhc
Confidence 4444444444455577899999999997654443
No 222
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=23.80 E-value=1.6e+02 Score=32.29 Aligned_cols=61 Identities=20% Similarity=0.279 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHH-HCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 165 DFTANDSYTFLHKWFL-KFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~-~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
.+.|+++..++++++. .+.+-....+-|. |||-.-|.=+..|..+. ++.|+.||..-+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~-------diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP-------DIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC-------CCCeEEeehHhcCHH
Confidence 4567888999999885 3432212233343 99999999999998863 499999999988875
No 223
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=23.73 E-value=1.7e+02 Score=27.79 Aligned_cols=102 Identities=15% Similarity=0.083 Sum_probs=64.7
Q ss_pred eeEeeCCCCcCcCCccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCc
Q 013879 139 MLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSL 218 (434)
Q Consensus 139 ~l~iDqPvg~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~ 218 (434)
.+-+|=. |-|-|-++- ++. +-...|+|+...+|-|-. ....==.|.|||=||--+-..|.++..- ..
T Consensus 65 ~fRfDF~-GnGeS~gsf--~~G--n~~~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d~----~~ 131 (269)
T KOG4667|consen 65 AFRFDFS-GNGESEGSF--YYG--NYNTEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHDI----RN 131 (269)
T ss_pred EEEEEec-CCCCcCCcc--ccC--cccchHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcCc----hh
Confidence 3445533 777664322 121 233346888888875433 2222246789999999999999999762 24
Q ss_pred eeeeeeeEecCCCCCchhhhhhHHHHHhhcccCCHH
Q 013879 219 YIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDE 254 (434)
Q Consensus 219 ~inLkGi~IGNg~idp~~q~~s~~~~a~~~gli~~~ 254 (434)
.||+.|=.-+-+.|+...+ ..+.++....|+|+-.
T Consensus 132 viNcsGRydl~~~I~eRlg-~~~l~~ike~Gfid~~ 166 (269)
T KOG4667|consen 132 VINCSGRYDLKNGINERLG-EDYLERIKEQGFIDVG 166 (269)
T ss_pred eEEcccccchhcchhhhhc-ccHHHHHHhCCceecC
Confidence 6888887777777765443 3466777777777643
No 224
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=23.67 E-value=71 Score=33.41 Aligned_cols=45 Identities=11% Similarity=0.158 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCC-CcEEEEeeccCcccchHHHHHHHh
Q 013879 167 TANDSYTFLHKWFLKFPSYRR-RTFYIAGESYAGRYIPELTELIHD 211 (434)
Q Consensus 167 ~a~~~~~fl~~F~~~fp~~~~-~~~~i~GESYgG~yvp~~a~~i~~ 211 (434)
..++.+.-|+..++..-+..+ +|+.|.+||.||.|+-.|.....+
T Consensus 160 ~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 160 ERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccc
Confidence 344555555555554333334 899999999999999888765543
No 225
>COG4425 Predicted membrane protein [Function unknown]
Probab=23.51 E-value=1.1e+02 Score=31.94 Aligned_cols=37 Identities=19% Similarity=0.364 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcc
Q 013879 164 DDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGR 200 (434)
Q Consensus 164 ~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~ 200 (434)
-.++|+.+.+..-.....-|+=..-++|+.|||-|..
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 3567888888888888888887766899999998754
No 226
>PRK14731 coaE dephospho-CoA kinase; Provisional
Probab=23.32 E-value=73 Score=29.34 Aligned_cols=32 Identities=31% Similarity=0.485 Sum_probs=26.8
Q ss_pred CCCEEEEECCCCCh--hhhhhhhhhccCCeeEcCC
Q 013879 90 EKPLVLWLNGGPGC--SSVGYGATQEIGPFLVDTD 122 (434)
Q Consensus 90 ~~Pl~lwlnGGPG~--ss~~~g~~~E~GP~~v~~~ 122 (434)
..|++|=+.||+|| |.+ ...|.+.|-..++.|
T Consensus 3 ~~~~~igitG~igsGKSt~-~~~l~~~g~~v~d~D 36 (208)
T PRK14731 3 SLPFLVGVTGGIGSGKSTV-CRFLAEMGCELFEAD 36 (208)
T ss_pred CCCEEEEEECCCCCCHHHH-HHHHHHCCCeEEecc
Confidence 34789999999999 778 688888888888776
No 227
>PRK03995 hypothetical protein; Provisional
Probab=22.89 E-value=1.5e+02 Score=28.77 Aligned_cols=47 Identities=13% Similarity=0.129 Sum_probs=29.4
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHHhh
Q 013879 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (434)
Q Consensus 163 ~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 212 (434)
.++.+++.+.+.+.+.+..-+.=...++.-+| ||||+|.+...+++.
T Consensus 157 ~d~~a~~~vA~avl~~l~~~~~~~~~~~iGiG---GgHYapr~T~~~l~~ 203 (267)
T PRK03995 157 KNERAGEILAEAVIEVLDSIEYEKFKPAIGIG---GGHYAPKFTKLALES 203 (267)
T ss_pred CCcHHHHHHHHHHHHHHhcccccCCCEEEEEC---CCCccHHHHHHHhhC
Confidence 55666666666666655421111123455566 899999999888763
No 228
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=22.82 E-value=89 Score=32.15 Aligned_cols=36 Identities=31% Similarity=0.710 Sum_probs=26.7
Q ss_pred eeEEEEEEeecCCCeeEEEEEEEecCCCCCCCEE-EEECC
Q 013879 61 RHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLV-LWLNG 99 (434)
Q Consensus 61 ~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~-lwlnG 99 (434)
...+|||+.+.. +++.. +.|+.....+.||| +||.|
T Consensus 199 ~~k~GfLTmDqt--Rkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 199 TYKSGFLTMDQT--RKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred ccccceeeEccc--cceEE-EeccCCCccCCCceeeEecC
Confidence 467999999864 77777 67765445566765 89997
No 229
>PHA02857 monoglyceride lipase; Provisional
Probab=22.12 E-value=83 Score=29.66 Aligned_cols=29 Identities=17% Similarity=0.206 Sum_probs=26.1
Q ss_pred cCCeEEEEecCCccccCcchHHHHHHhcC
Q 013879 386 AGLRIWIYSGDTDGRVPVLSTRYCLNSLG 414 (434)
Q Consensus 386 ~~irVLiY~Gd~D~i~n~~G~~~~i~~L~ 414 (434)
-.++|||.+|+.|.+||....+.+.+.+.
T Consensus 208 i~~Pvliv~G~~D~i~~~~~~~~l~~~~~ 236 (276)
T PHA02857 208 IKTPILILQGTNNEISDVSGAYYFMQHAN 236 (276)
T ss_pred CCCCEEEEecCCCCcCChHHHHHHHHHcc
Confidence 36899999999999999999999988774
No 230
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=20.99 E-value=86 Score=25.35 Aligned_cols=19 Identities=26% Similarity=0.177 Sum_probs=9.2
Q ss_pred hHhHHHHHHHHHHhhhhhh
Q 013879 7 MKVTICLTFCLLNALDVVS 25 (434)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~ 25 (434)
.|++++|+++|++.|.++|
T Consensus 3 SK~~llL~l~LA~lLlisS 21 (95)
T PF07172_consen 3 SKAFLLLGLLLAALLLISS 21 (95)
T ss_pred hhHHHHHHHHHHHHHHHHh
Confidence 4445555555444444444
No 231
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=20.90 E-value=3.6e+02 Score=27.18 Aligned_cols=44 Identities=20% Similarity=0.205 Sum_probs=32.5
Q ss_pred CCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCC
Q 013879 186 RRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (434)
Q Consensus 186 ~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~i 232 (434)
-.||+-|.|+|-|++-|=....++.++... .+=-.=++||.|..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~---~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAF---GLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhcccc---CeEeeEEEecCCCC
Confidence 578999999999999999999999887432 23233456666653
No 232
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=20.80 E-value=82 Score=28.76 Aligned_cols=29 Identities=14% Similarity=-0.027 Sum_probs=24.3
Q ss_pred CeEEEEecCCccccCcchHHHHHHhcCCC
Q 013879 388 LRIWIYSGDTDGRVPVLSTRYCLNSLGLS 416 (434)
Q Consensus 388 irVLiY~Gd~D~i~n~~G~~~~i~~L~w~ 416 (434)
-+++|.+|..|.+||....+...+.|.--
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 45789999999999999999888877533
No 233
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=20.64 E-value=52 Score=31.43 Aligned_cols=61 Identities=16% Similarity=0.307 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCcEEEEeeccCcccchHHHHHHHhhcCCCCceeeeeeeEecCCCCCch
Q 013879 165 DFTANDSYTFLHKWFLK-FPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (434)
Q Consensus 165 ~~~a~~~~~fl~~F~~~-fp~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~inLkGi~IGNg~idp~ 235 (434)
.+.++.+..++++++.. |.+-..+++-|. |||-.-|.=+..+... .++.|+.||.+-+++.
T Consensus 177 ~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~-------~~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 177 PEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQ-------PDIDGVLVGGASLKAE 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTS-------TT-SEEEESGGGGSTH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcC-------CCCCEEEEchhhhccc
Confidence 45677888888887642 311112234443 8999999988888875 3499999999998875
No 234
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=20.32 E-value=1.3e+02 Score=30.04 Aligned_cols=45 Identities=9% Similarity=0.133 Sum_probs=34.9
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccCcccchHHHHHHH
Q 013879 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIH 210 (434)
Q Consensus 163 ~~~~~a~~~~~fl~~F~~~fp~~~~~~~~i~GESYgG~yvp~~a~~i~ 210 (434)
+....+.++...+.+.+.... .+++.+.|||.||.-+..++..+-
T Consensus 105 ~~~~~~~ql~~~V~~~l~~~g---a~~v~LigHS~GG~~~ry~~~~~~ 149 (336)
T COG1075 105 SLAVRGEQLFAYVDEVLAKTG---AKKVNLIGHSMGGLDSRYYLGVLG 149 (336)
T ss_pred cccccHHHHHHHHHHHHhhcC---CCceEEEeecccchhhHHHHhhcC
Confidence 455667788888887666544 578999999999999997776664
No 235
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=20.07 E-value=46 Score=18.33 Aligned_cols=14 Identities=43% Similarity=0.430 Sum_probs=7.7
Q ss_pred hhHhHHHHHHHHHH
Q 013879 6 EMKVTICLTFCLLN 19 (434)
Q Consensus 6 ~~~~~~~~~~~~~~ 19 (434)
||+..++|.++++.
T Consensus 1 MMk~vIIlvvLLli 14 (19)
T PF13956_consen 1 MMKLVIILVVLLLI 14 (19)
T ss_pred CceehHHHHHHHhc
Confidence 46656666555443
No 236
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=20.05 E-value=58 Score=28.87 Aligned_cols=13 Identities=46% Similarity=0.968 Sum_probs=10.9
Q ss_pred CCEEEEECCCCCh
Q 013879 91 KPLVLWLNGGPGC 103 (434)
Q Consensus 91 ~Pl~lwlnGGPG~ 103 (434)
+|.+|||.|=||+
T Consensus 1 ~g~vIwltGlsGs 13 (156)
T PF01583_consen 1 KGFVIWLTGLSGS 13 (156)
T ss_dssp S-EEEEEESSTTS
T ss_pred CCEEEEEECCCCC
Confidence 4899999999998
Done!