Your job contains 1 sequence.
>013882
MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS
YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD
LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV
QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS
QQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTG
SNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEG
SNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETV
VQKPVMRLSLTSTA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013882
(434 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043560 - symbol:PAPS2 "poly(A) polymerase 2" ... 1028 1.2e-108 2
TAIR|locus:2134113 - symbol:nPAP "nuclear poly(a) polymer... 1058 5.7e-107 1
TAIR|locus:2030943 - symbol:PAPS1 "poly(A) polymerase 1" ... 829 1.0e-82 1
ZFIN|ZDB-GENE-040426-1256 - symbol:papolg "poly(A) polyme... 425 5.5e-41 2
DICTYBASE|DDB_G0288259 - symbol:papA "poly(A) polymerase"... 429 1.7e-39 1
UNIPROTKB|J9NS30 - symbol:PAPOLG "Uncharacterized protein... 416 4.6e-38 1
UNIPROTKB|A5D7N5 - symbol:PAPOLG "Uncharacterized protein... 414 5.3e-38 1
RGD|1310337 - symbol:Papolg "poly(A) polymerase gamma" sp... 411 1.1e-37 1
UNIPROTKB|F1SQL7 - symbol:PAPOLG "Uncharacterized protein... 411 1.1e-37 1
UNIPROTKB|Q9NRJ5 - symbol:PAPOLB "Poly(A) polymerase beta... 407 1.4e-37 1
UNIPROTKB|Q9BWT3 - symbol:PAPOLG "Poly(A) polymerase gamm... 410 1.4e-37 1
RGD|1310946 - symbol:Papolb "poly (A) polymerase beta (te... 405 2.5e-37 1
FB|FBgn0015949 - symbol:hrg "hiiragi" species:7227 "Droso... 348 3.2e-37 2
MGI|MGI:2442119 - symbol:Papolg "poly(A) polymerase gamma... 406 3.9e-37 1
MGI|MGI:1932115 - symbol:Papolb "poly (A) polymerase beta... 401 6.9e-37 1
UNIPROTKB|G3V2A0 - symbol:PAPOLA "Poly(A) polymerase alph... 394 1.3e-36 1
UNIPROTKB|I3LRR6 - symbol:PAPOLB "Uncharacterized protein... 398 1.4e-36 1
UNIPROTKB|Q3T0A2 - symbol:PAPOLA "Poly(A) polymerase alph... 396 3.8e-36 1
UNIPROTKB|G3MYA2 - symbol:PAPOLA "Poly(A) polymerase alph... 396 4.4e-36 1
UNIPROTKB|F1SAQ7 - symbol:PAPOLA "Uncharacterized protein... 395 4.8e-36 1
UNIPROTKB|P25500 - symbol:PAPOLA "Poly(A) polymerase alph... 396 4.9e-36 1
UNIPROTKB|I3L6F0 - symbol:PAPOLA "Uncharacterized protein... 395 6.1e-36 1
UNIPROTKB|G3XAH6 - symbol:PAPOLA "Poly(A) polymerase alph... 394 7.4e-36 1
UNIPROTKB|P51003 - symbol:PAPOLA "Poly(A) polymerase alph... 394 8.2e-36 1
UNIPROTKB|F1NDP1 - symbol:PAPOLA "Uncharacterized protein... 390 9.5e-36 1
UNIPROTKB|F1NKG9 - symbol:PAPOLA "Uncharacterized protein... 390 2.2e-35 1
MGI|MGI:109301 - symbol:Papola "poly (A) polymerase alpha... 389 2.8e-35 1
UNIPROTKB|F1PDS0 - symbol:PAPOLA "Uncharacterized protein... 389 2.9e-35 1
ZFIN|ZDB-GENE-030131-3507 - symbol:papola "poly(A) polyme... 372 1.8e-33 1
UNIPROTKB|F1NL95 - symbol:F1NL95 "Uncharacterized protein... 340 1.7e-31 2
UNIPROTKB|F1P3A1 - symbol:F1P3A1 "Uncharacterized protein... 340 2.0e-31 2
WB|WBGene00009658 - symbol:F43G6.5 species:6239 "Caenorha... 323 1.5e-28 1
WB|WBGene00011791 - symbol:T15H9.6 species:6239 "Caenorha... 323 1.5e-28 1
UNIPROTKB|Q09995 - symbol:T15H9.6 "Protein T15H9.6" speci... 323 1.5e-28 1
POMBASE|SPBC646.04 - symbol:pla1 "poly(A) polymerase Pla1... 304 2.1e-26 1
CGD|CAL0002451 - symbol:PAP1 species:5476 "Candida albica... 298 8.8e-26 1
UNIPROTKB|Q9UW26 - symbol:PAPA "Poly(A) polymerase PAPa" ... 298 8.8e-26 1
SGD|S000001710 - symbol:PAP1 "Poly(A) polymerase, one of ... 298 9.6e-26 1
WB|WBGene00012528 - symbol:pap-1 species:6239 "Caenorhabd... 294 4.0e-25 1
UNIPROTKB|Q9U2P3 - symbol:pap-1 "Protein PAP-1" species:6... 294 4.0e-25 1
GENEDB_PFALCIPARUM|PFF1240w - symbol:PFF1240w "poly(A) po... 223 1.3e-15 1
UNIPROTKB|C6KT92 - symbol:PFF1240w "Poly(A) polymerase PA... 223 1.3e-15 1
TAIR|locus:2084274 - symbol:PAPS3 "poly(A) polymerase 3" ... 207 5.8e-14 1
UNIPROTKB|F1PYB9 - symbol:PAPOLG "Uncharacterized protein... 199 2.3e-13 1
UNIPROTKB|Q59G05 - symbol:PAPOLG "Poly(A) polymerase gamm... 193 1.1e-12 1
RGD|1308673 - symbol:Papola "poly (A) polymerase alpha" s... 114 1.1e-09 2
UNIPROTKB|H0YJ00 - symbol:PAPOLA "Poly(A) polymerase alph... 114 0.00020 1
>TAIR|locus:2043560 [details] [associations]
symbol:PAPS2 "poly(A) polymerase 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006351 GO:GO:0003723 EMBL:AC005395
GO:GO:0004652 GO:GO:0043631 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AF255297 EMBL:AY039974 EMBL:AY074533 IPI:IPI00518420
PIR:E84653 RefSeq:NP_565611.1 UniGene:At.14867 SMR:O82312
IntAct:O82312 STRING:O82312 EnsemblPlants:AT2G25850.2 GeneID:817127
KEGG:ath:AT2G25850 TAIR:At2g25850 InParanoid:O82312 OMA:MGSESIN
ProtClustDB:CLSN2688428 BRENDA:2.7.7.19 Genevestigator:O82312
Uniprot:O82312
Length = 800
Score = 1028 (366.9 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
Identities = 199/308 (64%), Positives = 234/308 (75%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN RD+ H MPIITPAYPCMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GNTIC+E+ELNK WS+LF+ Y+FFE+Y+NYLQVD++AA+A+D
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAADAED 390
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK HCAFFMGLQR G
Sbjct: 391 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGG 450
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+P +VFP GYKR+R R S
Sbjct: 451 QECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQS 510
Query: 241 QQRSSENGNEYQTGS-------GLKRKKDPESVDQ--DGPEKRQSISPQKQDSLSPDHLA 291
QQ E G+E GS KRK D E ++ + EKR S S D+ SPD +
Sbjct: 511 QQ-CREPGDE-GVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPD--S 566
Query: 292 PSSVRSGT 299
SGT
Sbjct: 567 SGITTSGT 574
Score = 66 (28.3 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 380 LENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMR 427
+ENR+L +G F+ + EEL+ N+ L + G SE++ Q +MR
Sbjct: 741 VENRNLHSDGLFKSGLPEELQSNSLLSGTGKLDDGARSESL-QNEMMR 787
>TAIR|locus:2134113 [details] [associations]
symbol:nPAP "nuclear poly(a) polymerase" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0031123
"RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002687
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00656923
RefSeq:NP_001031779.1 UniGene:At.25084 ProteinModelPortal:F4JV63
SMR:F4JV63 PRIDE:F4JV63 EnsemblPlants:AT4G32850.8 GeneID:829421
KEGG:ath:AT4G32850 OMA:EDQLEWC PhylomeDB:F4JV63 Uniprot:F4JV63
Length = 765
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 205/326 (62%), Positives = 249/326 (76%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD+ H MPIITPAYPCMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQVDIVAA+A+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR---TRHPR 237
QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R +RH
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 238 LASQQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 291
L +S E+G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++
Sbjct: 509 LPGG-KSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPEN-- 565
Query: 292 PSSVRSGTGSNVEPVIPDKRVLNQEI 317
S++ +G PV +R ++EI
Sbjct: 566 -SAITTGW---TPPVCNLRRPPSEEI 587
>TAIR|locus:2030943 [details] [associations]
symbol:PAPS1 "poly(A) polymerase 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006351 EMBL:AC034106
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
UniGene:At.26787 UniGene:At.73166 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500 BRENDA:2.7.7.19
EMBL:BT005990 EMBL:AY323906 EMBL:AK227446 IPI:IPI00540119
PIR:B86315 RefSeq:NP_173240.2 ProteinModelPortal:Q9LMT2 SMR:Q9LMT2
IntAct:Q9LMT2 STRING:Q9LMT2 PaxDb:Q9LMT2 PRIDE:Q9LMT2
EnsemblPlants:AT1G17980.1 GeneID:838378 KEGG:ath:AT1G17980
TAIR:At1g17980 InParanoid:Q9LMT2 OMA:WDTLFEP PhylomeDB:Q9LMT2
ProtClustDB:CLSN2680711 Genevestigator:Q9LMT2 Uniprot:Q9LMT2
Length = 713
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 153/251 (60%), Positives = 183/251 (72%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+LVSRFFRV+ W WPN + LC+ DE LG VWDPR N +D+ H MPIITPAYPCMNSS
Sbjct: 259 ILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYPCMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLR+M +FQ GN ICE +E NKA W LFEP+ FFE+Y+NYLQ+DI AAN DD
Sbjct: 319 YNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQIDISAANVDD 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IER + L CHP+PH++ DTS+P HC++FMGLQRK G
Sbjct: 379 LRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPL-HCSYFMGLQRKQGVPA 436
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
EG+QFDIR +VEEFK ++N Y W PGMEI V HI+R+ +P +VFP G R H +
Sbjct: 437 AEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGV-RPSHTSKGT 495
Query: 241 --QQRSSENGN 249
R SE+ N
Sbjct: 496 WDSNRRSEHRN 506
>ZFIN|ZDB-GENE-040426-1256 [details] [associations]
symbol:papolg "poly(A) polymerase gamma"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
ZFIN:ZDB-GENE-040426-1256 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:64895 EMBL:BC056818
IPI:IPI00492667 RefSeq:NP_956915.1 UniGene:Dr.79169
ProteinModelPortal:Q6PGV5 SMR:Q6PGV5 STRING:Q6PGV5 PRIDE:Q6PGV5
GeneID:393593 KEGG:dre:393593 InParanoid:Q6PGV5 NextBio:20814613
ArrayExpress:Q6PGV5 Bgee:Q6PGV5 Uniprot:Q6PGV5
Length = 744
Score = 425 (154.7 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
Identities = 97/255 (38%), Positives = 145/255 (56%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST +M ++F+ G T+ +E+ KA WS LFEP FF+ YR+Y+ + A+ ++
Sbjct: 329 NVSTSTRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNFFQQYRHYIVLTASASTEENH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKP- 176
L W G VES++R L +ER+ Y L H P + + + F F+G+ K
Sbjct: 389 LEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENRNENDFVSMWFIGISFKKL 447
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
+ V +DI+ + ++ + N+ M K GM I +H+++KQ+ Y+ PE +R
Sbjct: 448 DNSDCVNIDLTYDIQSFTDTVYRQASNINML-KDGMTIEATHVKKKQLHHYLPPELVQRK 506
Query: 234 RHPRLASQQRSSENG 248
+ L RSS G
Sbjct: 507 KKS-LGDINRSSNGG 520
Score = 40 (19.1 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 231 KRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPE 272
KR P L + ++ + S K P S DG E
Sbjct: 647 KRPHSPSLEDPPKRHKDTEVFSDDSAFKEPYPPSSNGLDGDE 688
>DICTYBASE|DDB_G0288259 [details] [associations]
symbol:papA "poly(A) polymerase" species:44689
"Dictyostelium discoideum" [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA;ISS;IBA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
dictyBase:DDB_G0288259 GO:GO:0005524 GO:GO:0046872 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003723
EMBL:AAFI02000109 GO:GO:0005847 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 HSSP:P25500
RefSeq:XP_636814.1 ProteinModelPortal:Q54J73 STRING:Q54J73
EnsemblProtists:DDB0216279 GeneID:8626531 KEGG:ddi:DDB_G0288259
OMA:NINESST ProtClustDB:PTZ00418 Uniprot:Q54J73
Length = 809
Score = 429 (156.1 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 100/275 (36%), Positives = 147/275 (53%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++ RFF+VY +W+WP P++LC I E LG VW+P+ RDK H MPIITPAYP MNS+
Sbjct: 302 IIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPK---RDKAHLMPIITPAYPSMNST 358
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STL++M +F G I ++E + W L E FF Y Y+++D + N +D
Sbjct: 359 YNVSKSTLQLMKSEFVRGAEITRKIETGECTWKNLLEKCDFFTRYSFYIEIDCYSMNEED 418
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT----SKPCAHC-AFFMGLQRK 175
W+GW+ES+LR L +E K PYP + + + P C +FFMGL
Sbjct: 419 SRKWEGWIESKLRFLISNLESTPKMKFAV-PYPKGFTNNLHKANNPDQICTSFFMGLSFN 477
Query: 176 PGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRKQIPPYVFPEGYKR 232
+ D+ +V EF I ++ +P M+I V +I++KQ+P +V EG
Sbjct: 478 FSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQLPAFVKDEG--- 534
Query: 233 TRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD 267
P +++RSS G T LK + ++
Sbjct: 535 PEEPVKTTKKRSS-TGEPSATRKKLKSENSDNKLN 568
>UNIPROTKB|J9NS30 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:IDGSSKR EMBL:AAEX03007549
Ensembl:ENSCAFT00000044895 Uniprot:J9NS30
Length = 813
Score = 416 (151.5 bits), Expect = 4.6e-38, P = 4.6e-38
Identities = 105/316 (33%), Positives = 163/316 (51%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA-FFMGL--QR- 174
L W G VES++R L +ER+ + L H P + K + + +F+G+ +R
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 294
L+ RSS +G + + S D +G +S K PD L PS
Sbjct: 506 KQSLSDVSRSS-SGPQSKRSSLDSNCLDSSRDTDNGTPFNSPVSINKPSK--PD-LPPSG 561
Query: 295 VRSGTGSNVEPVIPDK 310
+ V+ +K
Sbjct: 562 ETERNNAEPTAVVVEK 577
>UNIPROTKB|A5D7N5 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DAAA02031008 EMBL:DAAA02031009 EMBL:BC140625 IPI:IPI00695296
RefSeq:NP_001091535.1 UniGene:Bt.24299 SMR:A5D7N5
Ensembl:ENSBTAT00000009749 GeneID:529071 KEGG:bta:529071
InParanoid:A5D7N5 NextBio:20874959 Uniprot:A5D7N5
Length = 740
Score = 414 (150.8 bits), Expect = 5.3e-38, P = 5.3e-38
Identities = 103/316 (32%), Positives = 160/316 (50%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA-FFMGL--QR- 174
L W G VES++R L +ER+ + L H P + K + + +F+G+ +R
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 294
L+ RSS ++ D + P +S K PD + PS
Sbjct: 506 KQSLSDVTRSSSGPQSKRSSLDSNCLDSSRDTDNETPFN-SPVSANKPSK--PD-IPPSG 561
Query: 295 VRSGTGSNVEPVIPDK 310
+ VI +K
Sbjct: 562 ETERNNAEPAAVIVEK 577
>RGD|1310337 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310337 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
CTD:64895 OrthoDB:EOG4R23T8 EMBL:CH473996 IPI:IPI00365079
RefSeq:NP_001100714.1 UniGene:Rn.27992 Ensembl:ENSRNOT00000008919
GeneID:305586 KEGG:rno:305586 UCSC:RGD:1310337 NextBio:654829
Uniprot:D3ZAN6
Length = 739
Score = 411 (149.7 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 113/323 (34%), Positives = 171/323 (52%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA-FFMGL--QR- 174
L W G VES++R L +ER+ + L H P + K + + +F+G+ +R
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ P + +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL-PAEILQKK 504
Query: 235 HPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEK-RQSISPQKQDSLSPDHLAPS 293
L+ RSS GL+ K+ S+D + + R + S +S H PS
Sbjct: 505 KKSLSDVSRSS---------GGLQSKRS--SLDSNCLDSSRDTDSGTPFNSPGSAH-KPS 552
Query: 294 SVRSGTG----SNVEP--VIPDK 310
+ S TG SN EP VI +K
Sbjct: 553 NPDSPTGDAERSNAEPMAVIVEK 575
>UNIPROTKB|F1SQL7 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 CTD:64895 OMA:IDGSSKR EMBL:CU467691
RefSeq:XP_003125156.1 UniGene:Ssc.62549 Ensembl:ENSSSCT00000009186
GeneID:100523547 KEGG:ssc:100523547 Uniprot:F1SQL7
Length = 741
Score = 411 (149.7 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 107/318 (33%), Positives = 166/318 (52%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA-FFMGL--QR- 174
L W G VES++R L +ER+ + L H P + K + + +F+G+ +R
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 294
L+ RSS +G + + S D +G +S K PD + P
Sbjct: 506 KQSLSDVTRSS-SGPQSKRSSLDSNCLDSSRDTDNGTPFNSPVSANKPSK--PD-IPP-- 559
Query: 295 VRSGTGSNVEP--VIPDK 310
+ +N EP VI +K
Sbjct: 560 LGETERNNTEPTAVIVEK 577
>UNIPROTKB|Q9NRJ5 [details] [associations]
symbol:PAPOLB "Poly(A) polymerase beta" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0006378 GO:GO:0003723
EMBL:AC092610 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 EMBL:AF218840 EMBL:BC036653 IPI:IPI00024525
RefSeq:NP_064529.4 UniGene:Hs.487409 ProteinModelPortal:Q9NRJ5
SMR:Q9NRJ5 STRING:Q9NRJ5 PhosphoSite:Q9NRJ5 DMDM:18203318
PaxDb:Q9NRJ5 PRIDE:Q9NRJ5 DNASU:56903 Ensembl:ENST00000404991
GeneID:56903 KEGG:hsa:56903 CTD:56903 GeneCards:GC07M004897
HGNC:HGNC:15970 MIM:607436 neXtProt:NX_Q9NRJ5 PharmGKB:PA32933
InParanoid:Q9NRJ5 OMA:FPGGVAW OrthoDB:EOG4THVSN GenomeRNAi:56903
NextBio:62363 ArrayExpress:Q9NRJ5 Bgee:Q9NRJ5 CleanEx:HS_PAPOLB
Genevestigator:Q9NRJ5 Uniprot:Q9NRJ5
Length = 636
Score = 407 (148.3 bits), Expect = 1.4e-37, P = 1.4e-37
Identities = 98/282 (34%), Positives = 152/282 (53%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A+
Sbjct: 328 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + +GL +KP
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMWVIGLGL-KKP 446
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
E++ +DI+ + ++ ++N MF + GM+I H+RRK++ + P +
Sbjct: 447 DNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRRKELHQ-LLPHHVLQD 504
Query: 234 RHPRLASQQRSSE-NGNEYQTGSGLKRKKD-PESVD--QDGP 271
+ +R ++ N + + +G + P S + GP
Sbjct: 505 KKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGP 546
>UNIPROTKB|Q9BWT3 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634 EMBL:CH471053
GO:GO:0046872 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
EMBL:AY029162 EMBL:AF312211 EMBL:AJ308101 EMBL:AK021867
EMBL:AK023544 EMBL:AK314663 EMBL:BC111701 EMBL:BC113747
IPI:IPI00304442 RefSeq:NP_075045.2 UniGene:Hs.387471
ProteinModelPortal:Q9BWT3 SMR:Q9BWT3 STRING:Q9BWT3
PhosphoSite:Q9BWT3 DMDM:116242699 PaxDb:Q9BWT3 PRIDE:Q9BWT3
Ensembl:ENST00000238714 GeneID:64895 KEGG:hsa:64895 UCSC:uc002sai.3
CTD:64895 GeneCards:GC02P060983 HGNC:HGNC:14982 HPA:CAB017795
neXtProt:NX_Q9BWT3 PharmGKB:PA32934 InParanoid:Q9BWT3 OMA:IDGSSKR
OrthoDB:EOG4R23T8 PhylomeDB:Q9BWT3 GenomeRNAi:64895 NextBio:67037
ArrayExpress:Q9BWT3 Bgee:Q9BWT3 CleanEx:HS_PAPOLG
Genevestigator:Q9BWT3 GermOnline:ENSG00000115421 Uniprot:Q9BWT3
Length = 736
Score = 410 (149.4 bits), Expect = 1.4e-37, P = 1.4e-37
Identities = 107/326 (32%), Positives = 171/326 (52%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA-FFMGL--QR- 174
L W G VES++R L +ER+ + L H P + K + + +F+G+ +R
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSS---ENGNEYQTGSGLKRKKDPES-VDQDGPEKRQ---SISPQKQDSLSP 287
L+ RSS ++ S L +D ++ + P + S+ +++S P
Sbjct: 506 KQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEP 565
Query: 288 DHLA---PSSVRSGTGSNVEPVIPDK 310
+ P SV G ++ PVI K
Sbjct: 566 AAVIVEKPLSVPPAQGLSI-PVIGAK 590
>RGD|1310946 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310946 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 EMBL:CH474012 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:56903
EMBL:BC079046 IPI:IPI00363752 RefSeq:NP_001012020.1
UniGene:Rn.210888 SMR:Q6AYH1 GeneID:304300 KEGG:rno:304300
UCSC:RGD:1310946 NextBio:652828 Genevestigator:Q6AYH1
Uniprot:Q6AYH1
Length = 642
Score = 405 (147.6 bits), Expect = 2.5e-37, P = 2.5e-37
Identities = 92/229 (40%), Positives = 133/229 (58%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQ-RK 175
L W G VES++R L +E++ + L Q P P E VD + + +GL +K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE--FRTMWVIGLVLKK 446
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
P E++ +DI+ + ++ +IN MF + M+I H+RRK++
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLRRKEL 494
>FB|FBgn0015949 [details] [associations]
symbol:hrg "hiiragi" species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA;NAS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HSSP:P25500 EMBL:AY113434 ProteinModelPortal:Q8MZ09
SMR:Q8MZ09 STRING:Q8MZ09 PaxDb:Q8MZ09 PRIDE:Q8MZ09
FlyBase:FBgn0015949 InParanoid:Q8MZ09 OrthoDB:EOG42547T ChiTaRS:HRG
ArrayExpress:Q8MZ09 Bgee:Q8MZ09 Uniprot:Q8MZ09
Length = 659
Score = 348 (127.6 bits), Expect = 3.2e-37, Sum P(2) = 3.2e-37
Identities = 69/152 (45%), Positives = 95/152 (62%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 153
L W G VES++R L +ER+ + L H P
Sbjct: 396 LEWCGLVESKVRLLISNLERNPHIAL-AHVNP 426
Score = 82 (33.9 bits), Expect = 3.2e-37, Sum P(2) = 3.2e-37
Identities = 42/156 (26%), Positives = 69/156 (44%)
Query: 159 TSKPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKL-SINMYMFWKPGMEICVSHI 216
TS P C+ +F+GL+ + E + I+ E + +N+ M K GM I H+
Sbjct: 461 TSAP--FCSMWFIGLEFERSENLNVDLTESIQNFTEHVMMHGVNIKML-KEGMTIDARHV 517
Query: 217 RRKQIPPYVFPEGYKRTRHPRLASQQRSSEN--GNEYQTGSGLKRKKDPESVDQD---GP 271
+RKQ+ Y+ + KR R + S + N + + L + +DP Q G
Sbjct: 518 KRKQLSLYLDSDFLKRERKS-MESHNNFNNTLLANRKRLSTELAQSQDPLPPGQQPSSGN 576
Query: 272 EKRQSISP-QK-QDSLSPDHLAPSSVRSGTGSNVEP 305
R S + Q+ DSL+ ++ SS G G+ P
Sbjct: 577 RGRDSGAKIQRLSDSLTEENSNASS-DMGAGTPTTP 611
>MGI|MGI:2442119 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:2442119 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DQ103505 EMBL:AK035810 EMBL:AL662810 EMBL:BC059271
IPI:IPI00317437 RefSeq:NP_766143.2 UniGene:Mm.470599 HSSP:P25500
ProteinModelPortal:Q6PCL9 SMR:Q6PCL9 PhosphoSite:Q6PCL9
PaxDb:Q6PCL9 PRIDE:Q6PCL9 Ensembl:ENSMUST00000020513 GeneID:216578
KEGG:mmu:216578 UCSC:uc007ifp.2 InParanoid:Q6PCL9 NextBio:375224
Bgee:Q6PCL9 CleanEx:MM_PAPOLG Genevestigator:Q6PCL9
GermOnline:ENSMUSG00000020273 Uniprot:Q6PCL9
Length = 739
Score = 406 (148.0 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 108/313 (34%), Positives = 160/313 (51%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA-FFMGL--QR- 174
L W G VES++R L +ER+ + L H P + K + + +F+G+ +R
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ P + +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL-PAEILQKK 504
Query: 235 HPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQD-GPEKRQSISPQKQDSLSPDHLAPS 293
L+ RSS G S L S D D G +S K + PD
Sbjct: 505 KKSLSDVSRSS--GGLQSKRSSLDSTCLDSSRDTDSGTPFNSPVSANKPSN--PDSPTGE 560
Query: 294 SVRSGTGSNVEPV 306
RS + EPV
Sbjct: 561 IERS----SAEPV 569
>MGI|MGI:1932115 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;ISA;IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IPI] [GO:0006369 "termination of RNA polymerase
II transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 MGI:MGI:1932115 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 GO:GO:0043631 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 CTD:56903 OMA:FPGGVAW OrthoDB:EOG4THVSN
EMBL:AF039957 EMBL:AB030729 IPI:IPI00230087 RefSeq:NP_064327.1
UniGene:Mm.441372 ProteinModelPortal:Q9WVP6 SMR:Q9WVP6
MINT:MINT-6167909 STRING:Q9WVP6 PhosphoSite:Q9WVP6 PaxDb:Q9WVP6
PRIDE:Q9WVP6 GeneID:56522 KEGG:mmu:56522 InParanoid:Q9WVP6
NextBio:312850 Bgee:Q9WVP6 CleanEx:MM_PAPOLB Genevestigator:Q9WVP6
Uniprot:Q9WVP6
Length = 641
Score = 401 (146.2 bits), Expect = 6.9e-37, P = 6.9e-37
Identities = 91/229 (39%), Positives = 132/229 (57%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQ-RK 175
L W G VES++R L +E++ + L Q P P E D + + +GL +K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE--FRTMWVIGLVLKK 445
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
P E++ +DI+ + ++ +IN MF + M+I H+RRK++
Sbjct: 446 PENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLRRKEL 493
>UNIPROTKB|G3V2A0 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
Pfam:PF04926 Pfam:PF04928 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 EMBL:AL163051 Gene3D:3.30.70.590
SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3V2A0 SMR:G3V2A0 Ensembl:ENST00000555626
ArrayExpress:G3V2A0 Bgee:G3V2A0 Uniprot:G3V2A0
Length = 475
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 109/334 (32%), Positives = 165/334 (49%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 77
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 78 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 137
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 138 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVFKK 195
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
E E D+ ++ F + +IN MF + M+I H++RKQ+ + P
Sbjct: 196 TEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHQ-LLPN--- 249
Query: 232 RTRHPRLASQQRSSENGNEYQT--GSGLKRKKDPE-SVDQDGPEKRQSISPQKQDSLSPD 288
H L +++ S G + S L D + S+ P SP S
Sbjct: 250 ---HV-LQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQG 305
Query: 289 HLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 321
+P+ +V + + +N++ +N + GG
Sbjct: 306 RNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 339
>UNIPROTKB|I3LRR6 [details] [associations]
symbol:PAPOLB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005783 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:FPGGVAW EMBL:CU928347
Ensembl:ENSSSCT00000031977 Uniprot:I3LRR6
Length = 636
Score = 398 (145.2 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 109/334 (32%), Positives = 168/334 (50%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 282 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 341
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 342 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIALLASAPTEKQH 401
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQR-K 175
L W G VES++R L +E++ + L Q P P E D + + L+R +
Sbjct: 402 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRESPDKEEFRTMWVIGLVLKRPE 461
Query: 176 PGEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI----PPYVFPEGY 230
+++ +DI+ + ++ ++N MF + M+I H+RRK++ P +V P+
Sbjct: 462 NSDILSIDLTYDIQSFTDTVYRQAVNSKMF-EMDMKIAAMHLRRKELHQLLPNHVLPQ-- 518
Query: 231 KRTRHPRLASQQRSSENGNEYQ---TGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSP 287
K+T S SS G TGS R P P ++ +P
Sbjct: 519 KKTPSHSEDSVSVSSFPGAVKTGPVTGSSPGRSS-PALAMMAAPVISAQVTDVSLQQANP 577
Query: 288 DHLAPSSVRSGT---GSNVEPVIPDKRVLNQEIA 318
+P S S + ++ ++P K V+ + I+
Sbjct: 578 SE-SPGSASSESIPHAGSLPAILPPKPVVTRVIS 610
>UNIPROTKB|Q3T0A2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003 UniGene:Bt.109586
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OrthoDB:EOG4J6RQB EMBL:DAAA02053163
EMBL:BC102481 IPI:IPI00705304 SMR:Q3T0A2 STRING:Q3T0A2
Ensembl:ENSBTAT00000021001 Uniprot:Q3T0A2
Length = 693
Score = 396 (144.5 bits), Expect = 3.8e-36, P = 3.8e-36
Identities = 109/334 (32%), Positives = 165/334 (49%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
E E D+ ++ F + +IN MF + M+I H++RKQ+ + P
Sbjct: 446 TEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHQ-LLPS--- 499
Query: 232 RTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQDGPEKRQSISPQKQDSLSPD 288
H L +++ S G + S L D + S+ P SP S
Sbjct: 500 ---HV-LQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQG 555
Query: 289 HLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 321
+P+ +V + + +N++ +N + GG
Sbjct: 556 RNSPAPAVTAASVTNIQATEVSLPQINSSESSGG 589
>UNIPROTKB|G3MYA2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:DAAA02053163
Ensembl:ENSBTAT00000063150 Uniprot:G3MYA2
Length = 718
Score = 396 (144.5 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 109/334 (32%), Positives = 165/334 (49%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
E E D+ ++ F + +IN MF + M+I H++RKQ+ + P
Sbjct: 446 TEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHQ-LLPS--- 499
Query: 232 RTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQDGPEKRQSISPQKQDSLSPD 288
H L +++ S G + S L D + S+ P SP S
Sbjct: 500 ---HV-LQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQG 555
Query: 289 HLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 321
+P+ +V + + +N++ +N + GG
Sbjct: 556 RNSPAPAVTAASVTNIQATEVSLPQINSSESSGG 589
>UNIPROTKB|F1SAQ7 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:CT827800
Ensembl:ENSSSCT00000002783 Uniprot:F1SAQ7
Length = 693
Score = 395 (144.1 bits), Expect = 4.8e-36, P = 4.8e-36
Identities = 109/334 (32%), Positives = 165/334 (49%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
E E D+ ++ F + +IN MF + M+I H++RKQ+ + P
Sbjct: 446 TEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHQ-LLPN--- 499
Query: 232 RTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQDGPEKRQSISPQKQDSLSPD 288
H L +++ S +G S L D + S+ P SP S
Sbjct: 500 ---HV-LQKKKKHSTDGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQG 555
Query: 289 HLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 321
+P+ +V + + +N++ +N + GG
Sbjct: 556 RNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 589
>UNIPROTKB|P25500 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IDA] [GO:0000287
"magnesium ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0043631 "RNA polyadenylation"
evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000287 GO:GO:0006378 GO:GO:0003723
GO:GO:0030145 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 EMBL:X61585
EMBL:X63436 IPI:IPI00686724 IPI:IPI00699231 PIR:S17875 PIR:S17925
PIR:S18642 RefSeq:NP_788820.1 UniGene:Bt.109586 PDB:1F5A PDB:1Q78
PDB:1Q79 PDBsum:1F5A PDBsum:1Q78 PDBsum:1Q79
ProteinModelPortal:P25500 SMR:P25500 STRING:P25500
Ensembl:ENSBTAT00000005300 GeneID:338051 KEGG:bta:338051 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 InParanoid:P25500 OMA:SPVTTQG
EvolutionaryTrace:P25500 NextBio:20812502 ArrayExpress:P25500
Uniprot:P25500
Length = 739
Score = 396 (144.5 bits), Expect = 4.9e-36, P = 4.9e-36
Identities = 109/334 (32%), Positives = 165/334 (49%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
E E D+ ++ F + +IN MF + M+I H++RKQ+ + P
Sbjct: 446 TEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHQ-LLPS--- 499
Query: 232 RTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQDGPEKRQSISPQKQDSLSPD 288
H L +++ S G + S L D + S+ P SP S
Sbjct: 500 ---HV-LQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQG 555
Query: 289 HLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 321
+P+ +V + + +N++ +N + GG
Sbjct: 556 RNSPAPAVTAASVTNIQATEVSLPQINSSESSGG 589
>UNIPROTKB|I3L6F0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:CT827800
Ensembl:ENSSSCT00000027948 Uniprot:I3L6F0
Length = 734
Score = 395 (144.1 bits), Expect = 6.1e-36, P = 6.1e-36
Identities = 109/334 (32%), Positives = 165/334 (49%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 284 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 343
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 344 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 403
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 404 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVFKK 461
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
E E D+ ++ F + +IN MF + M+I H++RKQ+ + P
Sbjct: 462 TEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHQ-LLPN--- 515
Query: 232 RTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQDGPEKRQSISPQKQDSLSPD 288
H L +++ S +G S L D + S+ P SP S
Sbjct: 516 ---HV-LQKKKKHSTDGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQG 571
Query: 289 HLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 321
+P+ +V + + +N++ +N + GG
Sbjct: 572 RNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 605
>UNIPROTKB|G3XAH6 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 EMBL:AL163051
Gene3D:3.30.70.590 SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3XAH6 SMR:G3XAH6 Ensembl:ENST00000392990
ArrayExpress:G3XAH6 Bgee:G3XAH6 Uniprot:G3XAH6
Length = 724
Score = 394 (143.8 bits), Expect = 7.4e-36, P = 7.4e-36
Identities = 109/334 (32%), Positives = 165/334 (49%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
E E D+ ++ F + +IN MF + M+I H++RKQ+ + P
Sbjct: 446 TEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHQ-LLPN--- 499
Query: 232 RTRHPRLASQQRSSENGNEYQT--GSGLKRKKDPE-SVDQDGPEKRQSISPQKQDSLSPD 288
H L +++ S G + S L D + S+ P SP S
Sbjct: 500 ---HV-LQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQG 555
Query: 289 HLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 321
+P+ +V + + +N++ +N + GG
Sbjct: 556 RNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 589
>UNIPROTKB|P51003 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IBA] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006378 "mRNA
polyadenylation" evidence=NAS] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
[GO:0000287 "magnesium ion binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0030145 "manganese ion binding"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005524 GO:GO:0005737 GO:GO:0005654 GO:GO:0000287
Reactome:REACT_1675 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0004652
Reactome:REACT_78 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 HOVERGEN:HBG053502 OMA:SPVTTQG
EMBL:BC000927 EMBL:BC036014 EMBL:BX248301 EMBL:BX248753
EMBL:BX161482 EMBL:X76770 IPI:IPI00384028 IPI:IPI01025082
RefSeq:NP_001238935.1 RefSeq:NP_001238936.1 RefSeq:NP_116021.2
UniGene:Hs.253726 ProteinModelPortal:P51003 SMR:P51003
DIP:DIP-27610N IntAct:P51003 MINT:MINT-125699 STRING:P51003
PhosphoSite:P51003 DMDM:59803092 PaxDb:P51003 PeptideAtlas:P51003
PRIDE:P51003 Ensembl:ENST00000216277 Ensembl:ENST00000557320
Ensembl:ENST00000557471 GeneID:10914 KEGG:hsa:10914 UCSC:uc001yfo.3
UCSC:uc001yfq.3 GeneCards:GC14P096969 HGNC:HGNC:14981 HPA:HPA001788
MIM:605553 neXtProt:NX_P51003 PharmGKB:PA32932 InParanoid:P51003
OrthoDB:EOG4J6RQB PhylomeDB:P51003 ChiTaRS:PAPOLA GenomeRNAi:10914
NextBio:41453 ArrayExpress:P51003 Bgee:P51003 CleanEx:HS_PAPOLA
Genevestigator:P51003 GermOnline:ENSG00000090060 Uniprot:P51003
Length = 745
Score = 394 (143.8 bits), Expect = 8.2e-36, P = 8.2e-36
Identities = 109/334 (32%), Positives = 165/334 (49%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
E E D+ ++ F + +IN MF + M+I H++RKQ+ + P
Sbjct: 446 TEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHQ-LLPN--- 499
Query: 232 RTRHPRLASQQRSSENGNEYQT--GSGLKRKKDPE-SVDQDGPEKRQSISPQKQDSLSPD 288
H L +++ S G + S L D + S+ P SP S
Sbjct: 500 ---HV-LQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQG 555
Query: 289 HLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 321
+P+ +V + + +N++ +N + GG
Sbjct: 556 RNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 589
>UNIPROTKB|F1NDP1 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
EMBL:AADN02003685 IPI:IPI00587050 Ensembl:ENSGALT00000018089
ArrayExpress:F1NDP1 Uniprot:F1NDP1
Length = 620
Score = 390 (142.3 bits), Expect = 9.5e-36, P = 9.5e-36
Identities = 98/259 (37%), Positives = 140/259 (54%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 149 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 208
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 209 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 268
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 269 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE--YRTMWVIGLVFKK 326
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI----PPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ+ P +V
Sbjct: 327 TEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQLHQLLPNHVLQ 384
Query: 228 EGYKR-TRHPRLASQQRSS 245
+ K T RL + SS
Sbjct: 385 KKKKHSTEGVRLTALNDSS 403
>UNIPROTKB|F1NKG9 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006378 "mRNA polyadenylation" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:AADN02003685
IPI:IPI00820771 RefSeq:NP_001185530.1 UniGene:Gga.4316
Ensembl:ENSGALT00000037556 GeneID:395878 KEGG:gga:395878
NextBio:20815945 ArrayExpress:F1NKG9 Uniprot:F1NKG9
Length = 737
Score = 390 (142.3 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 98/259 (37%), Positives = 140/259 (54%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 327 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 387 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE--YRTMWVIGLVFKK 444
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI----PPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ+ P +V
Sbjct: 445 TEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQLHQLLPNHVLQ 502
Query: 228 EGYKR-TRHPRLASQQRSS 245
+ K T RL + SS
Sbjct: 503 KKKKHSTEGVRLTALNDSS 521
>MGI|MGI:109301 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0006369 "termination of
RNA polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:109301 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000287 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OMA:SPVTTQG OrthoDB:EOG4J6RQB ChiTaRS:PAPOLA
EMBL:U52197 EMBL:U58134 EMBL:U58135 EMBL:AB086650 IPI:IPI00224655
IPI:IPI00224656 IPI:IPI00266738 IPI:IPI00467146 RefSeq:NP_035242.1
UniGene:Mm.255877 ProteinModelPortal:Q61183 SMR:Q61183
STRING:Q61183 PhosphoSite:Q61183 PaxDb:Q61183 PRIDE:Q61183
DNASU:18789 Ensembl:ENSMUST00000021535 Ensembl:ENSMUST00000109901
Ensembl:ENSMUST00000166735 GeneID:18789 KEGG:mmu:18789
UCSC:uc007oyv.1 UCSC:uc007oyx.1 InParanoid:Q61183 NextBio:295064
Bgee:Q61183 CleanEx:MM_PAPOLA Genevestigator:Q61183
GermOnline:ENSMUSG00000021111 Uniprot:Q61183
Length = 739
Score = 389 (142.0 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 95/248 (38%), Positives = 136/248 (54%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE--FRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI----PPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ+ P +V
Sbjct: 446 TEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHVLQ 503
Query: 228 EGYKRTRH 235
KR +H
Sbjct: 504 ---KRKKH 508
>UNIPROTKB|F1PDS0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IBA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0005737 GO:GO:0006378 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 OMA:SPVTTQG
EMBL:AAEX03005970 EMBL:AAEX03005971 Ensembl:ENSCAFT00000028221
Uniprot:F1PDS0
Length = 745
Score = 389 (142.0 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 98/259 (37%), Positives = 139/259 (53%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 274 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 333
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 334 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 393
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 394 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVFKK 451
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI----PPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ+ P +V
Sbjct: 452 TEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHQLLPNHVLQ 509
Query: 228 EGYKR-TRHPRLASQQRSS 245
+ K T RL SS
Sbjct: 510 KKKKHSTEGVRLTPLNDSS 528
>ZFIN|ZDB-GENE-030131-3507 [details] [associations]
symbol:papola "poly(A) polymerase alpha"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0031123 "RNA 3'-end
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 ZFIN:ZDB-GENE-030131-3507 GO:GO:0005634
GO:GO:0005737 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 EMBL:AL953887 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 GeneTree:ENSGT00390000017928
HOGENOM:HOG000204376 HOVERGEN:HBG053502 IPI:IPI00860939
RefSeq:NP_991321.2 UniGene:Dr.25690 SMR:Q5SNY2
Ensembl:ENSDART00000053858 GeneID:404041 KEGG:dre:404041
NextBio:20817515 Uniprot:Q5SNY2
Length = 723
Score = 372 (136.0 bits), Expect = 1.8e-33, P = 1.8e-33
Identities = 89/256 (34%), Positives = 136/256 (53%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L ++ L VWDPR D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M+++F+ G I +E+ NKA WS LFE FF+ Y++Y+ + A
Sbjct: 327 NVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKHYIVLLASAQTEKQH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + ++
Sbjct: 387 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPKEGNDKEEFSTMWVIGIVFKKME 446
Query: 177 G-EVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE-GYKRT 233
G E + FDI+ + ++ +I MF + M+I H++RKQ+ + PE R+
Sbjct: 447 GSENLNVDLTFDIQSFTDTVYRQAITSKMF-EQDMKITAMHVKRKQLHQ-LLPEVAIHRS 504
Query: 234 RHPRLASQQRSSENGN 249
+ + R+ + N
Sbjct: 505 KRKHSSDGVRAMNDSN 520
>UNIPROTKB|F1NL95 [details] [associations]
symbol:F1NL95 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008811
"chloramphenicol O-acetyltransferase activity" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00600779
Ensembl:ENSGALT00000012751 OMA:RYHVMPI Uniprot:F1NL95
Length = 748
Score = 340 (124.7 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 69/198 (34%), Positives = 109/198 (55%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF +++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST V++++ ++G + E+ ++ W LFE FF+ Y++Y+ + +
Sbjct: 327 NVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYKHYIVLTASTYTEEHH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKPG 177
L W G VES++R L +ER+ + + H P + + C + F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFINI-AHVNPQSFPGNQEHCKQSRYVSMWFLGIIFRKL 445
Query: 178 EVVQEGQQFDIRGSVEEF 195
E E + D+ ++ F
Sbjct: 446 ESA-ESTKIDLTYDIQSF 462
Score = 39 (18.8 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 249 NEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLS 286
N Q SGL+ K+ + + S +P SLS
Sbjct: 512 NISQNASGLRCKRASSNESLNSSRDNHSRTPYNSSSLS 549
>UNIPROTKB|F1P3A1 [details] [associations]
symbol:F1P3A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008811 "chloramphenicol
O-acetyltransferase activity" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00820385
Ensembl:ENSGALT00000040310 Uniprot:F1P3A1
Length = 738
Score = 340 (124.7 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 69/198 (34%), Positives = 109/198 (55%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF +++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST V++++ ++G + E+ ++ W LFE FF+ Y++Y+ + +
Sbjct: 327 NVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYKHYIVLTASTYTEEHH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKPG 177
L W G VES++R L +ER+ + + H P + + C + F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFINI-AHVNPQSFPGNQEHCKQSRYVSMWFLGIIFRKL 445
Query: 178 EVVQEGQQFDIRGSVEEF 195
E E + D+ ++ F
Sbjct: 446 ESA-ESTKIDLTYDIQSF 462
Score = 38 (18.4 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 13/56 (23%), Positives = 22/56 (39%)
Query: 249 NEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVE 304
N Q SGL+ K+ + + S +P SL + + R+ +N E
Sbjct: 512 NISQNASGLRCKRASSNESLNSSRDNHSRTPYNSSSLRSESKNATIWRTNGANNRE 567
>WB|WBGene00009658 [details] [associations]
symbol:F43G6.5 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
OMA:FPGGVAW HSSP:P25500 EMBL:Z50070 EMBL:AL032651 PIR:C88325
PIR:T22140 RefSeq:NP_496524.1 ProteinModelPortal:G5EBX5 SMR:G5EBX5
EnsemblMetazoa:F43G6.5 GeneID:174816 KEGG:cel:CELE_F43G6.5
CTD:174816 WormBase:F43G6.5 NextBio:885628 Uniprot:G5EBX5
Length = 554
Score = 323 (118.8 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 67/204 (32%), Positives = 117/204 (57%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ + F +++ W+WP PV+L I D A+L VWDPR+N+ D+ H MPI+TPA+P
Sbjct: 266 LIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLMPIVTPAFPQ 325
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NVS S+++V+ ++ + C+ ++ W L E FF Y++++ + + A
Sbjct: 326 QNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEINFFSRYKHFISLSMTAE 385
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
D LA+ G+ ESR+RQL L++E++ KL H P ++ P +F+GLQ
Sbjct: 386 TEKDELAFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFKAAKDP-KKSVWFIGLQFD- 442
Query: 177 GEVVQEGQQFDIRGSVEEFKLSIN 200
+ + D+ +++FK +I+
Sbjct: 443 ----ENVKNLDLTKDIQQFKRNID 462
>WB|WBGene00011791 [details] [associations]
symbol:T15H9.6 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 323 (118.8 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 67/204 (32%), Positives = 117/204 (57%)
Query: 2 LVSRFFRVYTMWRWPNPVML----C-AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ + F +++ W WP PV+L C D A+L VWDPR+N D+ H MPIITPA+P
Sbjct: 261 LIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITPAFPQ 320
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NVS S+++V+ D+ + IC+++ +W L E FF Y +++ + + A
Sbjct: 321 QNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFFSKYHHFIALKLKAE 380
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
+ + LA+ G+ ESR+RQL ++E++ ++ P ++ D P +F+GL
Sbjct: 381 SVKEELAFGGFFESRIRQLVQILEKNQVIQV-AQINPRKFKDVKDP-KKSIWFIGL---- 434
Query: 177 GEVVQEGQQFDIRGSVEEFKLSIN 200
E V + D+ +++FK++I+
Sbjct: 435 -EFVANVKNVDLTSDIQQFKMNID 457
>UNIPROTKB|Q09995 [details] [associations]
symbol:T15H9.6 "Protein T15H9.6" species:6239
"Caenorhabditis elegans" [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 323 (118.8 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 67/204 (32%), Positives = 117/204 (57%)
Query: 2 LVSRFFRVYTMWRWPNPVML----C-AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ + F +++ W WP PV+L C D A+L VWDPR+N D+ H MPIITPA+P
Sbjct: 261 LIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITPAFPQ 320
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NVS S+++V+ D+ + IC+++ +W L E FF Y +++ + + A
Sbjct: 321 QNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFFSKYHHFIALKLKAE 380
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
+ + LA+ G+ ESR+RQL ++E++ ++ P ++ D P +F+GL
Sbjct: 381 SVKEELAFGGFFESRIRQLVQILEKNQVIQV-AQINPRKFKDVKDP-KKSIWFIGL---- 434
Query: 177 GEVVQEGQQFDIRGSVEEFKLSIN 200
E V + D+ +++FK++I+
Sbjct: 435 -EFVANVKNVDLTSDIQQFKMNID 457
>POMBASE|SPBC646.04 [details] [associations]
symbol:pla1 "poly(A) polymerase Pla1" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IGI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IGI] [GO:0006378 "mRNA polyadenylation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 PomBase:SPBC646.04 GO:GO:0005829
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0005847
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 OMA:FPGGVAW EMBL:X79705
EMBL:AB027883 PIR:JC6058 RefSeq:NP_595362.1
ProteinModelPortal:Q10295 SMR:Q10295 MINT:MINT-2730388
STRING:Q10295 EnsemblFungi:SPBC646.04.1 GeneID:2541099
KEGG:spo:SPBC646.04 OrthoDB:EOG4SR150 NextBio:20802212
Uniprot:Q10295
Length = 566
Score = 304 (112.1 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 52/140 (37%), Positives = 85/140 (60%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FFR+ W WP P++L I++ L +W+P+ DK H MPIITPAYP M ++
Sbjct: 253 VIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +++ + I +++ + WSALF+ + FF Y++YL + A A+
Sbjct: 313 HNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLTITAAAKTAEA 372
Query: 121 LLAWKGWVESRLRQLTLMIE 140
L W G VES+LR L +E
Sbjct: 373 QLKWAGLVESKLRHLVTRLE 392
>CGD|CAL0002451 [details] [associations]
symbol:PAP1 species:5476 "Candida albicans" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IDA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IEA] [GO:0071050 "snoRNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 CGD:CAL0002451 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AACQ01000100 GO:GO:0044011 GO:GO:0004652
KO:K14376 EMBL:AF167162 EMBL:AB021667 RefSeq:XP_714613.1
ProteinModelPortal:Q9UW26 STRING:Q9UW26 GeneID:3643763
KEGG:cal:CaO19.3197 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 298 (110.0 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 61/155 (39%), Positives = 92/155 (59%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +Y+ W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD- 119
+N+++ST +V++ +FQ G + ++ + K WS L E + FF Y+ YL IVAA
Sbjct: 313 HNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLC--IVAATRST 370
Query: 120 --DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
+ L + G VES+LR L +E G HPY
Sbjct: 371 YAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPY 404
>UNIPROTKB|Q9UW26 [details] [associations]
symbol:PAPA "Poly(A) polymerase PAPa" species:237561
"Candida albicans SC5314" [GO:0003723 "RNA binding" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
CGD:CAL0002451 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 EMBL:AACQ01000100
GO:GO:0044011 GO:GO:0004652 KO:K14376 EMBL:AF167162 EMBL:AB021667
RefSeq:XP_714613.1 ProteinModelPortal:Q9UW26 STRING:Q9UW26
GeneID:3643763 KEGG:cal:CaO19.3197 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 298 (110.0 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 61/155 (39%), Positives = 92/155 (59%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +Y+ W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD- 119
+N+++ST +V++ +FQ G + ++ + K WS L E + FF Y+ YL IVAA
Sbjct: 313 HNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLC--IVAATRST 370
Query: 120 --DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
+ L + G VES+LR L +E G HPY
Sbjct: 371 YAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPY 404
>SGD|S000001710 [details] [associations]
symbol:PAP1 "Poly(A) polymerase, one of three factors
required for mRNA 3'-end pol" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IDA;IMP] [GO:0005654 "nucleoplasm" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071050 "snoRNA polyadenylation"
evidence=IGI] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 SGD:S000001710 GO:GO:0005524
GO:GO:0000287 GO:GO:0006378 GO:GO:0006351 EMBL:BK006944
GO:GO:0003723 GO:GO:0005847 GO:GO:0004652 EMBL:X65124
RefSeq:NP_012929.4 GeneID:853873 KEGG:sce:YKR004C PDB:3C66
PDBsum:3C66 RefSeq:NP_012927.3 GeneID:853871 KEGG:sce:YKR002W
KO:K14376 GO:GO:0071050 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
OMA:FPGGVAW OrthoDB:EOG4SR150 EMBL:X60307 EMBL:Z28227 PIR:S19031
PDB:1FA0 PDB:2HHP PDB:2O1P PDB:2Q66 PDBsum:1FA0 PDBsum:2HHP
PDBsum:2O1P PDBsum:2Q66 ProteinModelPortal:P29468 SMR:P29468
DIP:DIP-2297N IntAct:P29468 MINT:MINT-375429 STRING:P29468
PaxDb:P29468 PeptideAtlas:P29468 EnsemblFungi:YKR002W CYGD:YKR002w
EvolutionaryTrace:P29468 NextBio:975142 Genevestigator:P29468
GermOnline:YKR002W Uniprot:P29468
Length = 568
Score = 298 (110.0 bits), Expect = 9.6e-26, P = 9.6e-26
Identities = 58/164 (35%), Positives = 99/164 (60%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF + + W WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +V++ +F G I ++ NK W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 163
L W G VES++R L + +E K+ HP+ + ++S C
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF-ESSYCC 415
>WB|WBGene00012528 [details] [associations]
symbol:pap-1 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0006378
GO:GO:0010171 GO:GO:0040011 GO:GO:0048477 GO:GO:0006351
GO:GO:0003723 GO:GO:0040035 GO:GO:0040027 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 294 (108.6 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 67/212 (31%), Positives = 116/212 (54%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV R F +++ W WP+PV+L + D L VWDPR+ D+ H MPIITPA+P
Sbjct: 259 LVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITPAFPE 318
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NV+ ST V+ ++ IC ++ K++W+ALFE FF Y++++ + + A
Sbjct: 319 QNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHFIALIMAAP 378
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
N ++ L + G++ESR+R L +ER+ + H P+++ KP + F + + K
Sbjct: 379 NEEEELNYGGFLESRIRLLVQSLERNQ-DIIIAHNDPNKH----KPSPNAKFDVNPENKR 433
Query: 177 ------G-EVVQEGQQFDIRGSVEEFKLSINM 201
G E + + D+ ++ FK ++ +
Sbjct: 434 VTVWFIGLEFAEHAKTLDLTNEIQRFKTNVEL 465
>UNIPROTKB|Q9U2P3 [details] [associations]
symbol:pap-1 "Protein PAP-1" species:6239 "Caenorhabditis
elegans" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
GO:GO:0006378 GO:GO:0010171 GO:GO:0040011 GO:GO:0048477
GO:GO:0006351 GO:GO:0003723 GO:GO:0040035 GO:GO:0040027
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HSSP:P25500 EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 294 (108.6 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 67/212 (31%), Positives = 116/212 (54%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV R F +++ W WP+PV+L + D L VWDPR+ D+ H MPIITPA+P
Sbjct: 259 LVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITPAFPE 318
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NV+ ST V+ ++ IC ++ K++W+ALFE FF Y++++ + + A
Sbjct: 319 QNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHFIALIMAAP 378
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
N ++ L + G++ESR+R L +ER+ + H P+++ KP + F + + K
Sbjct: 379 NEEEELNYGGFLESRIRLLVQSLERNQ-DIIIAHNDPNKH----KPSPNAKFDVNPENKR 433
Query: 177 ------G-EVVQEGQQFDIRGSVEEFKLSINM 201
G E + + D+ ++ FK ++ +
Sbjct: 434 VTVWFIGLEFAEHAKTLDLTNEIQRFKTNVEL 465
>GENEDB_PFALCIPARUM|PFF1240w [details] [associations]
symbol:PFF1240w "poly(A) polymerase PAP,
putative" species:5833 "Plasmodium falciparum" [GO:0006378 "mRNA
polyadenylation" evidence=ISS] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 223 (83.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 39/89 (43%), Positives = 62/89 (69%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRKNRRDKTHHMPIITPAYPCM 57
L+ +FF+VY++W W PV+L I + + F VWDP KN +DK H MPIITPA+PCM
Sbjct: 331 LICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIITPAFPCM 390
Query: 58 NSSYNVSTSTLRVMMDQFQYGNTICEEVE 86
NS++NV+ T +++++F+ ++I + +E
Sbjct: 391 NSTHNVTYCTRNILIEEFKRAHSIIQYME 419
Score = 139 (54.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 44/205 (21%), Positives = 91/205 (44%)
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
M N+ +S + M++ N + + W + EP F +Y+++L + I+
Sbjct: 418 MEDENNIKSS---IRMNKLWPNNNVNNINNSSNNVWMTILEPLDLFSTYKHFLHIQIMGI 474
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA-FFMGL--- 172
N +WKGW+ES++R L +E T +L+ P+P Y + +C+ FF+ L
Sbjct: 475 NEFIYNSWKGWIESKIRLLFKKLE--TINELKIRPFPKFYFYKKEKSYYCSSFFIALIFF 532
Query: 173 QRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMFWK-PG-MEICVSHIRRKQIPPYVFPEG 229
+ P E F++ ++ +F +++N K P +I + + +R Q+ ++
Sbjct: 533 YKNPYE-----NTFNLSYAIRDFIDIALNWPQKVKYPNAFKINIMYQKRSQVLEFLDIVT 587
Query: 230 YKRTRHPRLASQQRSSENGNEYQTG 254
+ + + + + N Q G
Sbjct: 588 KEENQKNKQVMENNDKDETNHNQNG 612
>UNIPROTKB|C6KT92 [details] [associations]
symbol:PFF1240w "Poly(A) polymerase PAP, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=ISS;IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 223 (83.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 39/89 (43%), Positives = 62/89 (69%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRKNRRDKTHHMPIITPAYPCM 57
L+ +FF+VY++W W PV+L I + + F VWDP KN +DK H MPIITPA+PCM
Sbjct: 331 LICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIITPAFPCM 390
Query: 58 NSSYNVSTSTLRVMMDQFQYGNTICEEVE 86
NS++NV+ T +++++F+ ++I + +E
Sbjct: 391 NSTHNVTYCTRNILIEEFKRAHSIIQYME 419
Score = 139 (54.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 44/205 (21%), Positives = 91/205 (44%)
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
M N+ +S + M++ N + + W + EP F +Y+++L + I+
Sbjct: 418 MEDENNIKSS---IRMNKLWPNNNVNNINNSSNNVWMTILEPLDLFSTYKHFLHIQIMGI 474
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA-FFMGL--- 172
N +WKGW+ES++R L +E T +L+ P+P Y + +C+ FF+ L
Sbjct: 475 NEFIYNSWKGWIESKIRLLFKKLE--TINELKIRPFPKFYFYKKEKSYYCSSFFIALIFF 532
Query: 173 QRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMFWK-PG-MEICVSHIRRKQIPPYVFPEG 229
+ P E F++ ++ +F +++N K P +I + + +R Q+ ++
Sbjct: 533 YKNPYE-----NTFNLSYAIRDFIDIALNWPQKVKYPNAFKINIMYQKRSQVLEFLDIVT 587
Query: 230 YKRTRHPRLASQQRSSENGNEYQTG 254
+ + + + + N Q G
Sbjct: 588 KEENQKNKQVMENNDKDETNHNQNG 612
>TAIR|locus:2084274 [details] [associations]
symbol:PAPS3 "poly(A) polymerase 3" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=RCA] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 EMBL:AK221644 IPI:IPI00518099 RefSeq:NP_187308.3
UniGene:At.40500 ProteinModelPortal:Q56XM9 SMR:Q56XM9 IntAct:Q56XM9
STRING:Q56XM9 EnsemblPlants:AT3G06560.1 GeneID:819835
KEGG:ath:AT3G06560 TAIR:At3g06560 HOGENOM:HOG000006246
InParanoid:Q56XM9 OMA:IDETSWK PhylomeDB:Q56XM9
ProtClustDB:CLSN2699159 Genevestigator:Q56XM9 Uniprot:Q56XM9
Length = 507
Score = 207 (77.9 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 64/222 (28%), Positives = 104/222 (46%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L++ FF + W+WP PV+L G P MPI P +
Sbjct: 248 LLANFFYTFAHWQWPTPVVLLEDTYPSTGAP---PGL--------MPIQLPCGSHQYCNS 296
Query: 62 NVSTSTLRVMMDQFQYGNTICEE-VELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
++ ST ++ +F G+ + ++ ++LN + W LFE Y + +Y + ++ + AAN +D
Sbjct: 297 TITRSTFYKIVAEFLLGHNLTKDYLKLNFS-WKDLFELYPYANTYTWFTKIHLSAANQED 355
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L W GWV+SR R L + IE + YG C P P EYV+T + F+ GLQ + V
Sbjct: 356 LSDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRTINVS 412
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 222
DI +F ++N F I ++ ++ Q+P
Sbjct: 413 ------DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 448
>UNIPROTKB|F1PYB9 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR007010 InterPro:IPR011068
Pfam:PF04926 GO:GO:0005634 GO:GO:0006378 GO:GO:0003723
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:AAEX03007549
Ensembl:ENSCAFT00000004771 Uniprot:F1PYB9
Length = 384
Score = 199 (75.1 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 65/248 (26%), Positives = 115/248 (46%)
Query: 70 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 129
VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++ L W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 130 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA-FFMGL--QR-KPGEVVQE 182
S++R L +ER+ + L H P + K + + +F+G+ +R + E V
Sbjct: 63 SKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNI 121
Query: 183 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 242
+DI+ + N K GM+I +H+++KQ+ Y+ E ++ + L+
Sbjct: 122 DLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVS 181
Query: 243 RSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSN 302
RSS +G + + S D +G +S K PD L PS +
Sbjct: 182 RSS-SGPQSKRSSLDSNCLDSSRDTDNGTPFNSPVSINKPSK--PD-LPPSGETERNNAE 237
Query: 303 VEPVIPDK 310
V+ +K
Sbjct: 238 PTAVVVEK 245
>UNIPROTKB|Q59G05 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma variant"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR011068 Pfam:PF04926 GO:GO:0005634 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
RefSeq:NP_075045.2 UniGene:Hs.387471 GeneID:64895 KEGG:hsa:64895
CTD:64895 HGNC:HGNC:14982 GenomeRNAi:64895 NextBio:67037
EMBL:AC011245 EMBL:AC012498 EMBL:AB209304 IPI:IPI00555821
ProteinModelPortal:Q59G05 SMR:Q59G05 STRING:Q59G05 PRIDE:Q59G05
Ensembl:ENST00000412217 ArrayExpress:Q59G05 Bgee:Q59G05
Uniprot:Q59G05
Length = 382
Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 67/258 (25%), Positives = 123/258 (47%)
Query: 70 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 129
VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++ L W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 130 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA-FFMGL--QR-KPGEVVQE 182
S++R L +ER+ + L H P + K + + +F+G+ +R + E V
Sbjct: 63 SKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNI 121
Query: 183 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 242
+DI+ + N K GM+I +H+++KQ+ Y+ E ++ + L+
Sbjct: 122 DLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVN 181
Query: 243 RSS---ENGNEYQTGSGLKRKKDPES-VDQDGPEKRQ---SISPQKQDSLSPDHLA---P 292
RSS ++ S L +D ++ + P + S+ +++S P + P
Sbjct: 182 RSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 241
Query: 293 SSVRSGTGSNVEPVIPDK 310
SV G ++ PVI K
Sbjct: 242 LSVPPAQGLSI-PVIGAK 258
>RGD|1308673 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISO;IBA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0003723 GO:GO:0000398 GO:GO:0006369
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00567428
Ensembl:ENSRNOT00000047832 UCSC:RGD:1308673 ArrayExpress:F1MAC5
Uniprot:F1MAC5
Length = 681
Score = 114 (45.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 37
LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
Score = 105 (42.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 65/237 (27%), Positives = 101/237 (42%)
Query: 83 EEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD-DLLAWKGWVESRLRQLTLMIER 141
EE LN W LFF + +Q+ + +A + L W G VES++R L +E+
Sbjct: 291 EECNLNLPVWDPRVS-VLFFPLQIHTVQLLLASAPTEKQRLEWVGLVESKIRILVGSLEK 349
Query: 142 DTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF- 195
+ + L Q P P E D + + +GL K E E D+ ++ F
Sbjct: 350 NEFITLAHVNPQSFPAPKESPDREE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFT 406
Query: 196 ----KLSINMYMFWKPGMEICVSHIRRKQI----PPYVFPEGYKR-TRHPRLASQQRSSE 246
+ +IN MF + M+I H++RKQ+ P +V + K T +LA+ SS
Sbjct: 407 DTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLAALNDSSL 465
Query: 247 NGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNV 303
+ + S P S + P S S Q ++S +P A +SV S S V
Sbjct: 466 DLSMDSDNS--MSVPSPTSAMKTSP-LNSSGSSQGRNSPAPAVTA-ASVTSIQASEV 518
>UNIPROTKB|H0YJ00 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
Ensembl:ENST00000553461 Uniprot:H0YJ00
Length = 203
Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 37
LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 154 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 189
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 434 381 0.00090 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 621 (66 KB)
Total size of DFA: 278 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.78u 0.13s 32.91t Elapsed: 00:00:01
Total cpu time: 32.79u 0.13s 32.92t Elapsed: 00:00:01
Start: Mon May 20 19:51:36 2013 End: Mon May 20 19:51:37 2013