BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013882
(434 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 712
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 305/441 (69%), Positives = 350/441 (79%), Gaps = 17/441 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLC I+E ELGFS+WDPRKN RD+THHMPIITPAYPCMNSS
Sbjct: 229 MLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSIWDPRKNPRDRTHHMPIITPAYPCMNSS 288
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVMM+QFQYGN ICEE+EL K QW+ LFEPYLFFESY+NYLQVDIVA + DD
Sbjct: 289 YNVSTSTLRVMMEQFQYGNKICEEIELIKTQWATLFEPYLFFESYKNYLQVDIVATDVDD 348
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L AWKGWVESRLRQLTLMI+RDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK GE++
Sbjct: 349 LRAWKGWVESRLRQLTLMIDRDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEMI 408
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIRG+V+EF+ SINMYMFWKPGMEI VSH+RRKQIP YVFP+GY+R RHPR+ +
Sbjct: 409 QEGQQFDIRGTVDEFRNSINMYMFWKPGMEIYVSHVRRKQIPSYVFPDGYRRARHPRVTA 468
Query: 241 QQRSSE----NGNEYQTGS---GLKRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHL- 290
QQ+S + + + Y GS G KRKKD + +D D PEKR SISPQ++DS+SPD
Sbjct: 469 QQQSDKTCCGDSDAYGNGSSERGHKRKKDSDEIDVKNDMPEKRNSISPQRRDSVSPDIFT 528
Query: 291 ----APSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNES 346
PSS S + DKR + +G SNSS ITS++SE+ SCED+G ES
Sbjct: 529 HKFGGPSSECSAIAEGKGTLQLDKRTFCPDDVDGVCTSNSSGITSLSSEIVSCEDIGTES 588
Query: 347 VAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLG 406
VAGSSEGNNGS EGSNN VSSQSD DA+S+SLLEN + DG G QD + EELE NA +
Sbjct: 589 VAGSSEGNNGSAEGSNNLVSSQSDSGDAESESLLENAYADG-GVLQDGLQEELEPNAAV- 646
Query: 407 SVLQSTSGIDSETVVQKPVMR 427
+ T G+ +E +QKPV+R
Sbjct: 647 EMAPDTLGVSAEA-LQKPVIR 666
>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 295/434 (67%), Positives = 336/434 (77%), Gaps = 23/434 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGFSVWDPRKN RD+THHMPIITPAYPCMNSS
Sbjct: 267 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSS 326
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVMM+QFQYGN ICE +EL+ AQW ALFEPYLFFESY+NYLQVDIVA + DD
Sbjct: 327 YNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKNYLQVDIVAVDIDD 386
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L AWKGWVESRLRQLTLMIERDT+GKLQCHPYPHEYVDTSK C+HCAFFMGLQRK GE++
Sbjct: 387 LRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQGEII 446
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIRG+V+EF+ SINMYMFWKPGMEI VSH+RRKQIP YVFPEGYKR+R R +
Sbjct: 447 QEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRPVN 506
Query: 241 QQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTG 300
QQ+ E KR +ISPQ+QDS+SP+ ++ +++
Sbjct: 507 QQQGDE-----------------------ASAKRLTISPQRQDSVSPEIISHRWMKADEK 543
Query: 301 SNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEG 360
N+EP DK + AE G VSNSSV+TS+TSEV S DVG ESV GSS+GN GSVEG
Sbjct: 544 GNIEPDKSDKPIPCTGNAEAGSVSNSSVVTSITSEVSSSGDVGFESVGGSSDGNTGSVEG 603
Query: 361 SNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETV 420
SN SQ D C+ADS+ LLEN ++ FQD +HEELE NA LG VL+S G+DSE V
Sbjct: 604 SNILGISQGDSCEADSELLLENGCVNAKEGFQDGLHEELEPNAALGIVLKSRGGVDSEPV 663
Query: 421 VQKPVMRLSLTSTA 434
+ + RLSLTSTA
Sbjct: 664 PKSVLSRLSLTSTA 677
>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 294/483 (60%), Positives = 337/483 (69%), Gaps = 57/483 (11%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGFSVWDPRKN RD+THHMPIITPAYPCMNSS
Sbjct: 267 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSS 326
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVMM+QFQYGN ICE +EL+ AQW ALFEPYLFFESY+NYLQVDIVA + DD
Sbjct: 327 YNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKNYLQVDIVAVDIDD 386
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L AWKGWVESRLRQLTLMIERDT+GKLQCHPYPHEYVDTSK C+HCAFFMGLQRK GE++
Sbjct: 387 LRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQGEII 446
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIRG+V+EF+ SINMYMFWKPGMEI VSH+RRKQIP YVFPEGYKR+R R +
Sbjct: 447 QEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRPVN 506
Query: 241 QQRSSENGNEYQTGSGLKRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA------- 291
QQ+ E + +KRKKDPE VD QD KR +ISPQ+QDS+SP+ ++
Sbjct: 507 QQQGDEACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVSPEIISHRFSSSS 566
Query: 292 PSSVRSGTGSNVEPVIPDKR---------------VLNQEIAEGG--------------- 321
SG+ E V D++ V N E+ G
Sbjct: 567 QECSASGSAKAKEIVEGDRKCQVGMGKLEDLVSTNVENIEMGAIGRGMRWMKADEKGNIE 626
Query: 322 -DVSNSSVITSVTSEVG----------------SCEDVGNESVAGSSEGNNGSVEGSNNP 364
D S+ + + +E G S DVG ESV GSS+GN GSVEGSN
Sbjct: 627 PDKSDKPIPCTGNAEAGSVSNSSVVTSITSEVSSSGDVGFESVGGSSDGNTGSVEGSNIL 686
Query: 365 VSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKP 424
SQ D C+ADS+ LLEN ++ FQD +HEELE NA LG VL+S G+DSE V K
Sbjct: 687 GISQGDSCEADSELLLENGCVNAKEGFQDGLHEELEPNAALGIVLKSRGGVDSEP-VPKS 745
Query: 425 VMR 427
V+R
Sbjct: 746 VLR 748
>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 758
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 287/489 (58%), Positives = 336/489 (68%), Gaps = 70/489 (14%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML+SRFFRVYT+WRWPNPVMLCAI+E +LG SVWDPRKN RD+THHMPIITPAYPCMNSS
Sbjct: 274 MLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPIITPAYPCMNSS 333
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVMM+QFQ+GN +CEE+ELNKAQWS+LFEPYLFFESY+NYLQVDIVAA+ADD
Sbjct: 334 YNVSTSTLRVMMEQFQFGNKVCEEIELNKAQWSSLFEPYLFFESYKNYLQVDIVAADADD 393
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L +WKGWVESR R LTL+IER T GKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK GE++
Sbjct: 394 LRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEII 453
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIR SV+EFK + YMFWKPGMEI VSH+RR+QIPP+VFPEG+KR R RL++
Sbjct: 454 QEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKRFRASRLSA 513
Query: 241 QQRSS-----ENGNEYQTGSGLKRKKDPESV--DQDGPEKRQSISPQKQDSLSP------ 287
QRS +NG LKRK DP + + + P+KRQSISP++QDS+S
Sbjct: 514 LQRSPNQEDVQNGRSGSCERDLKRKNDPARIEGEHNSPQKRQSISPRRQDSVSSNISNFS 573
Query: 288 -------------------------------DHLAPSSVRSGT--------------GSN 302
+ LA R G GS
Sbjct: 574 NTASSERPEADIEAKTIVEKNSPCRTITRENEELAFGGSRIGNCSSRKDSSSVESDKGST 633
Query: 303 VEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEG-- 360
VE + PDK + + SNSSVITS+TSE SCE+VG AGSSEGN GS+EG
Sbjct: 634 VEIIDPDKVPFTE--IDHRCASNSSVITSLTSESSSCENVGFALAAGSSEGNAGSIEGSA 691
Query: 361 --SNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSE 418
SNNP +S D C+ADS+ L+NR ++G D +H E E NA L L G+ S
Sbjct: 692 DESNNPGTSVVDSCEADSELQLDNRCVNG-----DSMHMETEPNAVLEMALNPGGGVKS- 745
Query: 419 TVVQKPVMR 427
T +Q PV+R
Sbjct: 746 TTIQNPVIR 754
>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 772
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 287/489 (58%), Positives = 336/489 (68%), Gaps = 70/489 (14%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML+SRFFRVYT+WRWPNPVMLCAI+E +LG SVWDPRKN RD+THHMPIITPAYPCMNSS
Sbjct: 288 MLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPIITPAYPCMNSS 347
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVMM+QFQ+GN +CEE+ELNKAQWS+LFEPYLFFESY+NYLQVDIVAA+ADD
Sbjct: 348 YNVSTSTLRVMMEQFQFGNKVCEEIELNKAQWSSLFEPYLFFESYKNYLQVDIVAADADD 407
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L +WKGWVESR R LTL+IER T GKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK GE++
Sbjct: 408 LRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEII 467
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIR SV+EFK + YMFWKPGMEI VSH+RR+QIPP+VFPEG+KR R RL++
Sbjct: 468 QEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKRFRASRLSA 527
Query: 241 QQRSS-----ENGNEYQTGSGLKRKKDPESV--DQDGPEKRQSISPQKQDSLSP------ 287
QRS +NG LKRK DP + + + P+KRQSISP++QDS+S
Sbjct: 528 LQRSPNQEDVQNGRSGSCERDLKRKNDPARIEGEHNSPQKRQSISPRRQDSVSSNISNFS 587
Query: 288 -------------------------------DHLAPSSVRSGT--------------GSN 302
+ LA R G GS
Sbjct: 588 NTASSERPEADIEAKTIVEKNSPCRTITRENEELAFGGSRIGNCSSRKDSSSVESDKGST 647
Query: 303 VEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEG-- 360
VE + PDK + + SNSSVITS+TSE SCE+VG AGSSEGN GS+EG
Sbjct: 648 VEIIDPDKVPFTE--IDHRCASNSSVITSLTSESSSCENVGFALAAGSSEGNAGSIEGSA 705
Query: 361 --SNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSE 418
SNNP +S D C+ADS+ L+NR ++G D +H E E NA L L G+ S
Sbjct: 706 DESNNPGTSVVDSCEADSELQLDNRCVNG-----DSMHMETEPNAVLEMALNPGGGVKS- 759
Query: 419 TVVQKPVMR 427
T +Q PV+R
Sbjct: 760 TTIQNPVIR 768
>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/471 (59%), Positives = 324/471 (68%), Gaps = 56/471 (11%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGFSVWDPRKN RD+THHMPIITPAYPCMNSS
Sbjct: 258 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSS 317
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVMM+QFQYGN ICE +EL+ AQW ALFEPYLFFESY+NYLQVDIVA + DD
Sbjct: 318 YNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKNYLQVDIVAVDIDD 377
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L AWKGWVESRLRQLTLMIERDT+GKLQCHPYPHEYVDTSK C+HCAFFMGLQRK GE++
Sbjct: 378 LRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQGEII 437
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIRG+V+EF+ SINMYMFWKPGMEI VSH+RRKQIP YVFPEGYKR+R R +
Sbjct: 438 QEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRPVN 497
Query: 241 QQRSSENGNEYQTGSGLKRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA------- 291
QQ+ E + +KRKKDPE VD QD KR +ISPQ+QDS+SP+ ++
Sbjct: 498 QQQGDEACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVSPEIISHRFSSSS 557
Query: 292 PSSVRSGTGSNVEPVIPDKR---------------VLNQEIAEGG--------------- 321
SG+ E V D++ V N E+ G
Sbjct: 558 QECSASGSAKAKEIVEGDRKCQVGMGKLEDLVSTNVENIEMGAIGRGMRWMKADEKGNIE 617
Query: 322 -DVSNSSVITSVTSEVG----------------SCEDVGNESVAGSSEGNNGSVEGSNNP 364
D S+ + + +E G S DVG ESV GSS+GN GSVEGSN
Sbjct: 618 PDKSDKPIPCTGNAEAGSVSNSSVVTSITSEVSSSGDVGFESVGGSSDGNTGSVEGSNIL 677
Query: 365 VSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGI 415
SQ D C+ADS+ LLEN ++ FQD +HEELE + + +G+
Sbjct: 678 GISQGDSCEADSELLLENGCVNAKEGFQDGLHEELEAATRVVVIFAFNAGV 728
>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 766
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 264/444 (59%), Positives = 313/444 (70%), Gaps = 32/444 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWP PVMLC I+E ELGF VW P KN RD++HHMPIITPAYPCMNSS
Sbjct: 262 MLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKNPRDRSHHMPIITPAYPCMNSS 321
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVMMDQFQYGN IC E+EL++A W ALFE Y FFESY+NYLQVD+VAA+ADD
Sbjct: 322 YNVSTSTLRVMMDQFQYGNKICGEIELSRACWKALFEQYSFFESYKNYLQVDVVAADADD 381
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L +WKGWVESRLRQLTLMIERDT+GKLQCHPY HE+VDTS+ CAHCAFFMGLQRK GEVV
Sbjct: 382 LRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRLCAHCAFFMGLQRKQGEVV 441
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIRG+VEEF+ S+NMYMFWKPGMEI VSH+RR+QIP YV P+GYKR+R R S
Sbjct: 442 QEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPFYVVPDGYKRSRLSRPTS 501
Query: 241 QQRSSENGNEYQTGS----GLKRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLAPSS 294
Q + ++ + +G+ ++++K+ + VD D KRQS SP S D LA S
Sbjct: 502 QVENCKSFHNEVSGTEHVERIRKRKNNDGVDVRGDAIVKRQSASP------SEDRLARHS 555
Query: 295 VRSGTGSNVEPVIPDKRVLNQE---IAEGGD-----------VSNSSVITSVTSEVGSCE 340
G +VE V + + N E ++ G SNSSVITS VGS E
Sbjct: 556 SLGTGGLSVEAVSDRQELRNVECNHLSNSGQDELDRTESPEAASNSSVITS----VGSSE 611
Query: 341 DVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELE 400
D G+ +VAG E + G VE NN S + DS +L++N GN FQ + E+ +
Sbjct: 612 DTGSVTVAGCVEESTGGVEMMNNGWFEDSTYGN-DSVTLVKNIVASGNEVFQHELQEQFQ 670
Query: 401 LNAGLGSVLQSTSGIDSETVVQKP 424
NA LG VL S + SE VVQ+P
Sbjct: 671 PNATLGMVLDSAEKVISE-VVQEP 693
>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
Length = 633
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/435 (57%), Positives = 300/435 (68%), Gaps = 22/435 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLC+I+E ELGFSVW P +N RD++H MPIITPAYPCMNSS
Sbjct: 180 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSS 239
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVMM+QFQYGN ICE++ELNK WSALF PY+FFE Y+N+LQ+D+VAA+ DD
Sbjct: 240 YNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFEGYKNFLQIDVVAADVDD 299
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L AWKGWVESRLRQLTLMIERDT GKLQCHPYP EY+D ++ C+H AFFMGLQRK GEVV
Sbjct: 300 LRAWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDTRKCSHSAFFMGLQRKQGEVV 359
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA- 239
QEGQQFDIRG+VE F+ SINMYMFWKPGM+I VSHIRR+QIP YVFP+G+KR+R R
Sbjct: 360 QEGQQFDIRGTVEAFRHSINMYMFWKPGMDIHVSHIRRRQIPCYVFPDGFKRSRPSRSTV 419
Query: 240 -------SQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAP 292
S Q + +G E + G +KRK D + V QD K+ +P + SL+P + A
Sbjct: 420 PVENRPKSLQENEVSGTELR-GRNIKRKYDDKGVKQDVVLKKHCANPFVE-SLTPGNYAV 477
Query: 293 S------SVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNES 346
S S S + +N E D+R+ + E G SNSS +TSV+SE GS E V + S
Sbjct: 478 SDCQELKSGESTSLTNSEQDELDRRMSPEAGTECG--SNSSGVTSVSSEDGSPEYVASVS 535
Query: 347 VAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSL-LENRHLDGNGAFQDRVHEELELNAGL 405
VAG + + +VE NN S ADS L + N QD + LE A
Sbjct: 536 VAGYVDDSARAVEAMNN--SRFDTTYMADSVKLGIGTLASANNEVLQDTLQTHLEPIAMA 593
Query: 406 GSVLQSTS-GIDSET 419
G L ST DSE
Sbjct: 594 GMFLDSTKESFDSEA 608
>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 790
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 258/450 (57%), Positives = 313/450 (69%), Gaps = 26/450 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWP PVMLC I+E +LGF VW P KN RD++HHMPIITPAYPCMNSS
Sbjct: 262 MLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKNPRDRSHHMPIITPAYPCMNSS 321
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVMM+QFQYGN IC E+EL+K W ALFE Y FFESY+NYLQVD+VAA+ADD
Sbjct: 322 YNVSMSTLRVMMEQFQYGNKICGEIELSKDCWKALFEKYSFFESYKNYLQVDVVAADADD 381
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L +WKGWVESRLRQLTLMIERDT+GKLQCHPY HE+VDTS+ CAHCAFFMGL RK GEVV
Sbjct: 382 LRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRQCAHCAFFMGLHRKEGEVV 441
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIRG+VEEF+ S+NMYMFWKPGMEI VSH+RR+QIP YVFP+GYKR+R R S
Sbjct: 442 QEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPCYVFPDGYKRSRPSRPTS 501
Query: 241 QQRS--SENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSP-DHLAPSSVRS 297
Q + S + NE ++R + + + DG + R+ ++Q + P D LA +
Sbjct: 502 QFENCKSFHNNEVSVTEHVERIRKRK--NNDGVDVREDAIVKRQYACPPGDRLARRNSLG 559
Query: 298 GTGSNVEPVIPDKRVLNQE---IAEGGD-----------VSNSSVITSVTSEVGSCEDVG 343
G +VE V + + + E ++ G SNSSVITS VGS ED+
Sbjct: 560 TGGLSVEAVSDSQELRSVECNHLSNSGQDDLDRTESPEAASNSSVITS----VGSSEDIV 615
Query: 344 NESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNA 403
+ SVAG E + G VE NN + DS +L++N GN FQ + ++L+ NA
Sbjct: 616 SVSVAGCVENSRG-VEMMNNG-RFEDTTYGNDSVTLVKNIVASGNEVFQHELQQQLQPNA 673
Query: 404 GLGSVLQSTSGIDSETVVQKPVMRLSLTST 433
LG VL S + SE VQ+PV+R + ST
Sbjct: 674 MLGMVLDSAEKVLSEA-VQEPVIRHEIEST 702
>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
Length = 740
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/487 (51%), Positives = 303/487 (62%), Gaps = 67/487 (13%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK RD++HHMPIITPAYPCMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 327
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 328 YNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGED 387
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G +
Sbjct: 388 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKI 447
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR------ 234
QEGQQFDIRG+V+EF+ I MY +W+PGME+ VSH+RRKQIP YVFPEGYKR R
Sbjct: 448 QEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHIN 507
Query: 235 HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE---KRQSISPQKQDSLSPDHL 290
HP+ S + E+G ++ G KRK D V P KR SISP S+SP H
Sbjct: 508 HPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISP----SISPVHQ 562
Query: 291 APSSVRSGT------GSNVEPV------IPDKRVLNQEIAE------------------- 319
SS SG S PV + LN +A
Sbjct: 563 KTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLASEKSLDSVTSGSKCVGVEAV 622
Query: 320 ------------GGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSS 367
G ++ N + T S E V +E V S G N S E +
Sbjct: 623 CPSDATKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVGSESLGGNKSGE----LLER 678
Query: 368 QSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMR 427
D A L+EN H GNG Q + EELE N G+ V ++ +G++S+ QK +R
Sbjct: 679 AEDMGSA----LVENVHFGGNGVVQTGLPEELEPNNGIEVVSKAHAGVNSDA-PQKASLR 733
Query: 428 LSLTSTA 434
+SLTSTA
Sbjct: 734 VSLTSTA 740
>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 732
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/297 (70%), Positives = 245/297 (82%), Gaps = 9/297 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLC+I+E ELGF +WDPR+N RD+ H MPIITPAYPCMNSS
Sbjct: 272 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCMNSS 331
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM+DQF YGN IC+E+ELNKAQWSALF+PY+FFE+Y+NYLQVDI+A++ DD
Sbjct: 332 YNVSASTLRVMVDQFCYGNKICDEIELNKAQWSALFQPYIFFEAYKNYLQVDIIASDTDD 391
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAW+GWVESRLR LTL IERDT G LQCHPYPHEYVDTSKPCAH AFFMGLQRK G
Sbjct: 392 LLAWRGWVESRLRMLTLKIERDTNGMLQCHPYPHEYVDTSKPCAHSAFFMGLQRKEGVRG 451
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIRG+V+EF+ INMYM+WKPGM+I VSH+RRKQ+P +VFP+GYKRTR PR S
Sbjct: 452 QEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFPDGYKRTRMPRHIS 511
Query: 241 QQR--SSENGNEYQTGSGL-----KRKKDPESVDQ--DGPEKRQSISPQKQDSLSPD 288
Q + ++ +G GL KRK E VD+ D P+KR SISPQ+ + +SP+
Sbjct: 512 HQAEITGDDATNCYSGPGLSERCIKRKNYSEMVDKKPDKPDKRASISPQRLECVSPE 568
>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 700
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/455 (52%), Positives = 287/455 (63%), Gaps = 58/455 (12%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T WRWPNPVMLCAI+E ELGF VWDPRKN RD+THHMPIITPAYPCMNSS
Sbjct: 250 MLVSRFFRVFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPCMNSS 309
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVM++QFQ+GN IC+E+ELNKA W ALFE + FFE+Y+NYLQVDI+A + +D
Sbjct: 310 YNVSTSTLRVMIEQFQFGNKICQEIELNKANWPALFESFQFFEAYKNYLQVDIIAEDDED 369
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYGKLQCHPYP+EY D S+ CAHCAFFMGL R G +
Sbjct: 370 LRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSRNVGVKI 429
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
+EGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRK+IP YVFPEGY+R R R S
Sbjct: 430 EEGQQFDIRGTVDEFRHDINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYRRPRPQRHVS 489
Query: 241 QQRSS-----ENGNEYQTGSG-LKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 294
Q+ S ENGN + G LKRK D S D E +S+ + S+SP H SS
Sbjct: 490 HQQQSDKNDTENGNMTGSPDGQLKRKHD--SAGTDDTEPCRSVKRASRASVSPVHPTTSS 547
Query: 295 VRSGTGSN------------------------------------------VEPVIPDKRV 312
SG S+ + + D +
Sbjct: 548 PSSGNISDEATCNNQKKMSSNASGGSQNSHGSGNLEQANCSGSSPASEKSTDSIASDSKC 607
Query: 313 LNQEIAEGGDVSNSSV-----ITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSS 367
+ E GDV+N+ V + + T V C + + SE G NNP
Sbjct: 608 VIGETVCSGDVTNNLVTCISPVNNSTPTVAVCTTLKRVAEKVVSELVGSESLGGNNP--E 665
Query: 368 QSDCCDADSQS-LLENRHLDGNGAFQDRVHEELEL 401
+ + D S L+EN H GNG Q +HEELE+
Sbjct: 666 LLEIAEKDMGSVLVENVHFGGNGVTQSGLHEELEV 700
>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
Length = 754
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/479 (54%), Positives = 313/479 (65%), Gaps = 54/479 (11%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWDPR+N RD+ HHMPIITPAYPCMNSS
Sbjct: 275 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPIITPAYPCMNSS 334
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVMM+QFQYGN ICEE+ELNKAQWSALFEPYLFFE+Y+NYLQ+DI+AA+ADD
Sbjct: 335 YNVSISTLRVMMEQFQYGNKICEEIELNKAQWSALFEPYLFFEAYKNYLQIDIIAADADD 394
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESRLRQLTL IERDT G LQCHPYP+EY+DTSK C HCAFFMGLQR+ G
Sbjct: 395 LLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSKQCPHCAFFMGLQRRKGVSG 454
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIRG+VEEF+ INMYMFWKPGM++ VSH RR+Q+P +VFP+GYKR+R R +
Sbjct: 455 QEGQQFDIRGTVEEFRQEINMYMFWKPGMDVYVSHARRRQLPAFVFPDGYKRSRTSRHPN 514
Query: 241 QQ--RSSENGNEYQTGS---GLKRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLAPS 293
QQ + S+ + GS LKRK D E VD D PEKR S+SPQ+ S+SP+ S
Sbjct: 515 QQAGKPSDVSATSRAGSVEGHLKRKNDHEVVDVRPDKPEKRASVSPQRLQSVSPESNTIS 574
Query: 294 SVRSGTGSNVEPVIPDKRV-----------LNQEIAEGGDVSNSSV------------IT 330
S R+ S E V + L++ ++ G V+ V I+
Sbjct: 575 SGRTSLVSFCEGVPLESSTVADVDSNSEGKLDRGHSDNGKVTFRGVVQVTETINHDPRIS 634
Query: 331 SVTS-------------EVGSCEDVGNE---------SVAGSSEGNNGSVEGSNNPVSSQ 368
+ TS E C+ + + + + S G G + +
Sbjct: 635 AQTSMDLDDIPIYLSKVEEAECKIMNPDPKQELLDPYATSNSINGEAPKTMGEDR-IGDL 693
Query: 369 SDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMR 427
D ADS SLLE LD + Q + E LE N + V+ S G SE+ +QKPV+R
Sbjct: 694 GDILAADSDSLLETDCLDVSRLSQSGLLENLEPNTEMVKVVNSQDGARSES-LQKPVIR 751
>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 694
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/415 (55%), Positives = 286/415 (68%), Gaps = 28/415 (6%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T WRWP PVMLCAI+E ELGF VWDPRKN RD+THHMPIITPAYPCMNSS
Sbjct: 250 MLVSRFFRVFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPCMNSS 309
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVM++QFQ+GN IC+E+E+NKA WSALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 310 YNVSTSTLRVMIEQFQFGNKICQEIEMNKASWSALFEPFNFFEAYKNYLQVDIIAEDDED 369
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYGKLQCHPYP+EY D S+ CAHCAFFMGL RK G +
Sbjct: 370 LRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSRKEGVKI 429
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRK+IP YVFPEGYKR R R +
Sbjct: 430 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYKRPRPQRHVN 489
Query: 241 QQRSSENGNEYQTG---SGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRS 297
Q S+ N+ G S LKRK D +D P QS+ K+ S+SP H SS RS
Sbjct: 490 HQHQSDK-NDPGNGSPDSQLKRKHDSTGIDDTEP--CQSV---KRASISPGHPKTSSPRS 543
Query: 298 GTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGS 357
G S+ EP+ ++ + + G S S GN+ S G++ +
Sbjct: 544 GNVSD-EPISNSQQKVTSNASGGSQDSPGS---------------GNQDQTKCS-GSSHA 586
Query: 358 VEGSNNPVSSQSDCC--DADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSVLQ 410
E S + V+S S C +A + ++H+D +D + + ++ L V +
Sbjct: 587 SEKSLDSVASGSKCVKIEAVCSGDVTSKHVDCISPVKDSIAPTVAVSTTLKRVAE 641
>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 651
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/299 (69%), Positives = 243/299 (81%), Gaps = 11/299 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLC+I+E ELGF +WDPR+N RD+ H MPIITPAYPCMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCMNSS 330
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVMM+QF+YGN IC+E+ELNKAQWSALF+PY+FFE+Y+NYLQVDI+A++ADD
Sbjct: 331 YNVSASTLRVMMEQFRYGNKICDEIELNKAQWSALFQPYIFFEAYKNYLQVDIIASDADD 390
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAW+GWVESRLR LTL IERDT G LQCHPYP+EYVDTSK CAH AFFMGLQRK G
Sbjct: 391 LLAWRGWVESRLRLLTLKIERDTNGMLQCHPYPNEYVDTSKLCAHSAFFMGLQRKEGVRG 450
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIRG+V+EF+ INMYM+WKPGM+I VSH+RRKQ+P +VFP GYKRTR PR S
Sbjct: 451 QEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFPGGYKRTRMPRHIS 510
Query: 241 QQRSSENGNEYQTGSG---------LKRKKDPESVDQD--GPEKRQSISPQKQDSLSPD 288
Q + + SG +KRK PE VD+ P+KR SISPQ+ + +SP+
Sbjct: 511 HQAEKTGDDATKCYSGSGSGSSERCIKRKSCPEMVDKKPGKPDKRASISPQRLECVSPE 569
>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/456 (53%), Positives = 294/456 (64%), Gaps = 44/456 (9%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T WRWPNPVML +I E ELGF VWDPRKN RD+THHMPIITPAYP MNSS
Sbjct: 268 MLVSRFFRVFTQWRWPNPVMLRSIKEEELGFPVWDPRKNPRDRTHHMPIITPAYPGMNSS 327
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVM +QFQ GN +CE++E+NKA WSALF+PY FFE+Y+NYLQVDIVAA+ DD
Sbjct: 328 YNVSTSTLRVMTEQFQQGNKMCEDIEMNKANWSALFDPYPFFEAYKNYLQVDIVAADQDD 387
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDT+G LQCHPYP EYVD SK C HCAFFMGLQRK G ++
Sbjct: 388 LRLWKGWVESRLRQLTLKIERDTFGMLQCHPYPTEYVDNSKQCPHCAFFMGLQRKQGVLI 447
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QEGQQFDIRG+V+EF+ S+ MYMFWKPGM+I VSH+RRKQIP YVFPEG +R R R A+
Sbjct: 448 QEGQQFDIRGTVDEFRQSVGMYMFWKPGMDIYVSHVRRKQIPSYVFPEGVRRVRSGRAAN 507
Query: 241 Q-QRSSENGNE-------------------YQTGSGLKRKKDPESVDQDGPEKRQSISPQ 280
Q ++S G E + ++K + D EKR ++SP
Sbjct: 508 QIGKTSPQGRESSPKCCNGNFGDDIVEECNANSAEKANKRKHDMTTDVGKAEKRAAVSPN 567
Query: 281 --KQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGS 338
K SLS ++ S RSG S AE D S+S T+ +
Sbjct: 568 DVKSASLS---VSDVSNRSGLASQTSS------------AEEPDHSSS---TAGYGAIAK 609
Query: 339 CEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEE 398
+VG + G + NG + + + S L+N + G Q+ EE
Sbjct: 610 PVEVGEKPSKGCVK--NGDQLEQKRSFTQKESVEEIGSGKGLQNSCILRAGKCQNG-SEE 666
Query: 399 LELNAGLGSVLQSTSGIDSETVVQKPVMRLSLTSTA 434
LE + + +L S +G+ SETV QKPV+R+SL STA
Sbjct: 667 LESSINVEMILPSHAGVKSETV-QKPVLRVSLASTA 701
>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
Length = 760
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/453 (52%), Positives = 280/453 (61%), Gaps = 65/453 (14%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK RD++HHMPIITPAYPCMNSS
Sbjct: 266 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 325
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 326 YNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGED 385
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G +
Sbjct: 386 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKI 445
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR------ 234
QEGQQFDIRG+V+EF+ I MY +W+PGME+ VSH+RRKQIP YVFPEGYKR R
Sbjct: 446 QEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHIN 505
Query: 235 HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE---KRQSISPQKQDSLSPDHL 290
HP+ S + E+G ++ G KRK D V P KR SISP S+SP H
Sbjct: 506 HPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISP----SISPVHQ 560
Query: 291 APSSVRSGT------GSNVEPV------IPDKRVLNQEIAE------------------- 319
SS SG S PV + LN +A
Sbjct: 561 KTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLASEKSLDSVTSGSKCVGVEAV 620
Query: 320 -----------GGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQ 368
G ++ N + T S E V +E V S G N S E
Sbjct: 621 CPSDAKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVGSESLGGNKSGELLERAEDMG 680
Query: 369 SDCCDADSQSLLENRHLDGNGAFQDRVHEELEL 401
S +L+EN H GNG Q + EELE+
Sbjct: 681 S--------ALVENVHFGGNGVVQTGLPEELEI 705
>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
Length = 761
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/454 (52%), Positives = 280/454 (61%), Gaps = 66/454 (14%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK RD++HHMPIITPAYPCMNSS
Sbjct: 266 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 325
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 326 YNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGED 385
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G +
Sbjct: 386 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKI 445
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR------ 234
QEGQQFDIRG+V+EF+ I MY +W+PGME+ VSH+RRKQIP YVFPEGYKR R
Sbjct: 446 QEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHIN 505
Query: 235 HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE---KRQSISPQKQDSLSPDHL 290
HP+ S + E+G ++ G KRK D V P KR SISP S+SP H
Sbjct: 506 HPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISP----SISPVHQ 560
Query: 291 APSSVRSGT------GSNVEPV------IPDKRVLNQEIAE------------------- 319
SS SG S PV + LN +A
Sbjct: 561 KTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLASEKSLDSVTSGSKCVGVEAV 620
Query: 320 ------------GGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSS 367
G ++ N + T S E V +E V S G N S E
Sbjct: 621 CPSDATKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVGSESLGGNKSGELLERAEDM 680
Query: 368 QSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL 401
S +L+EN H GNG Q + EELE+
Sbjct: 681 GS--------ALVENVHFGGNGVVQTGLPEELEI 706
>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 708
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/454 (52%), Positives = 281/454 (61%), Gaps = 66/454 (14%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK RD++HHMPIITPAYPCMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 327
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 328 YNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGED 387
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G +
Sbjct: 388 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKI 447
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR------ 234
QEGQQFDIRG+V+EF+ I MY +W+PGME+ VSH+RRKQIP YVFPEGYKR R
Sbjct: 448 QEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHIN 507
Query: 235 HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE---KRQSISPQKQDSLSPDHL 290
HP+ S + E+G ++ G KRK D V P KR SISP S+SP H
Sbjct: 508 HPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISP----SISPVHQ 562
Query: 291 APSSVRSGT------GSNVEPV------IPDKRVLNQEIAE------------------- 319
SS SG S PV + LN +A
Sbjct: 563 KTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLASEKSLDSVTSGSKCVGVEAV 622
Query: 320 ------------GGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSS 367
G ++ N + T S E V +E V S G N S E +
Sbjct: 623 CPSDATKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVGSESLGGNKSGE----LLER 678
Query: 368 QSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL 401
D A L+EN H GNG Q + EELE+
Sbjct: 679 AEDMGSA----LVENVHFGGNGVVQTGLPEELEV 708
>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
gi|223947741|gb|ACN27954.1| unknown [Zea mays]
gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 694
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/437 (52%), Positives = 275/437 (62%), Gaps = 31/437 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN RD+ HHMPIITPAYPCMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVM++QFQ+GN IC+E+E+NK W ALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 319 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G +
Sbjct: 379 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 438
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR---TRHPR 237
QEGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRKQ+P YVFPEGYKR +RH
Sbjct: 439 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 498
Query: 238 LASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSISP-----QKQDSLSPDHL- 290
S + +E+G ++ S LKRK D D KR S SP Q + D
Sbjct: 499 HQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVHPKNSPQSGSTGDETR 558
Query: 291 -------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGDVSNSSVITS---------- 331
APS G+ ++ + PD + G V + I+
Sbjct: 559 CNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCSGDAISKHSSVPLVENC 618
Query: 332 VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAF 391
T V C + + SE GSNN D L EN GNG
Sbjct: 619 TTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESMEKED--VLAENVRFGGNGVA 676
Query: 392 QDRVHEELELNAGLGSV 408
Q + EELE N + +V
Sbjct: 677 QGGLPEELEPNNRIEAV 693
>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
Length = 708
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/454 (52%), Positives = 281/454 (61%), Gaps = 66/454 (14%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK RD++HHMPIITPAYPCMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 327
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 328 YNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGED 387
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G +
Sbjct: 388 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKI 447
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR------ 234
QEGQQFDIRG+V+EF+ I MY +W+PGME+ VSH+RRKQIP YVFPEGYKR R
Sbjct: 448 QEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHIN 507
Query: 235 HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE---KRQSISPQKQDSLSPDHL 290
HP+ S + E+G ++ G KRK D V P KR SISP S+SP H
Sbjct: 508 HPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISP----SISPVHQ 562
Query: 291 APSSVRSGT------GSNVEPV------IPDKRVLNQEIAE------------------- 319
SS SG S PV + LN +A
Sbjct: 563 KTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLASEKSLDSVTSGSKCVGVEAV 622
Query: 320 ------------GGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSS 367
G ++ N + T S E V +E V S G N S E +
Sbjct: 623 CPSDATKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVGSESLGGNKSGE----LLER 678
Query: 368 QSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL 401
D A L+EN H GNG Q + EELE+
Sbjct: 679 AEDMGSA----LVENVHFGGNGVVQTGLPEELEV 708
>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 702
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/430 (53%), Positives = 272/430 (63%), Gaps = 31/430 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN RD+ HHMPIITPAYPCMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVM++QFQ+GN IC+E+E+NK W ALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 319 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G +
Sbjct: 379 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 438
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR---TRHPR 237
QEGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRKQ+P YVFPEGYKR +RH
Sbjct: 439 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 498
Query: 238 LASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSISP-----QKQDSLSPDHL- 290
S + +E+G ++ S LKRK D D KR S SP Q + D
Sbjct: 499 HQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVHPKNSPQSGSTGDETR 558
Query: 291 -------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGDVSNSSVITS---------- 331
APS G+ ++ + PD + G V + I+
Sbjct: 559 CNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCSGDAISKHSSVPLVENC 618
Query: 332 VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAF 391
T V C + + SE GSNN D L EN GNG
Sbjct: 619 TTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESMEKED--VLAENVRFGGNGVA 676
Query: 392 QDRVHEELEL 401
Q + EELE+
Sbjct: 677 QGGLPEELEV 686
>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 686
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/430 (53%), Positives = 272/430 (63%), Gaps = 31/430 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN RD+ HHMPIITPAYPCMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVM++QFQ+GN IC+E+E+NK W ALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 319 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G +
Sbjct: 379 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 438
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR---TRHPR 237
QEGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRKQ+P YVFPEGYKR +RH
Sbjct: 439 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 498
Query: 238 LASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSISP-----QKQDSLSPDHL- 290
S + +E+G ++ S LKRK D D KR S SP Q + D
Sbjct: 499 HQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVHPKNSPQSGSTGDETR 558
Query: 291 -------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGDVSNSSVITS---------- 331
APS G+ ++ + PD + G V + I+
Sbjct: 559 CNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCSGDAISKHSSVPLVENC 618
Query: 332 VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAF 391
T V C + + SE GSNN D L EN GNG
Sbjct: 619 TTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESMEKED--VLAENVRFGGNGVA 676
Query: 392 QDRVHEELEL 401
Q + EELE+
Sbjct: 677 QGGLPEELEV 686
>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 696
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/430 (53%), Positives = 272/430 (63%), Gaps = 31/430 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN RD+ HHMPIITPAYPCMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVM++QFQ+GN IC+E+E+NK W ALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 319 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G +
Sbjct: 379 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 438
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR---TRHPR 237
QEGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRKQ+P YVFPEGYKR +RH
Sbjct: 439 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 498
Query: 238 LASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSISP-----QKQDSLSPDHL- 290
S + +E+G ++ S LKRK D D KR S SP Q + D
Sbjct: 499 HQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVHPKNSPQSGSTGDETR 558
Query: 291 -------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGDVSNSSVITS---------- 331
APS G+ ++ + PD + G V + I+
Sbjct: 559 CNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCSGDAISKHSSVPLVENC 618
Query: 332 VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAF 391
T V C + + SE GSNN D L EN GNG
Sbjct: 619 TTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESMEKED--VLAENVRFGGNGVA 676
Query: 392 QDRVHEELEL 401
Q + EELE+
Sbjct: 677 QGGLPEELEI 686
>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
Length = 428
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/430 (53%), Positives = 272/430 (63%), Gaps = 31/430 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN RD+ HHMPIITPAYPCMNSS
Sbjct: 1 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 60
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVM++QFQ+GN IC+E+E+NK W ALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 61 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 120
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G +
Sbjct: 121 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 180
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR---TRHPR 237
QEGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRKQ+P YVFPEGYKR +RH
Sbjct: 181 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 240
Query: 238 LASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSISP-----QKQDSLSPDHL- 290
S + +E+G ++ S LKRK D D KR S SP Q + D
Sbjct: 241 HQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVHPKNSPQSGSTGDETR 300
Query: 291 -------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGDVSNSSVITS---------- 331
APS G+ ++ + PD + G V + I+
Sbjct: 301 CNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCSGDAISKHSSVPLVENC 360
Query: 332 VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAF 391
T V C + + SE GSNN D L EN GNG
Sbjct: 361 TTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESMEKED--VLAENVRFGGNGVA 418
Query: 392 QDRVHEELEL 401
Q + EELE+
Sbjct: 419 QGGLPEELEV 428
>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 863
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/347 (60%), Positives = 251/347 (72%), Gaps = 6/347 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLC+I+E ELGF VWDPR+N RD+ H MPIITPAYPCMNSS
Sbjct: 267 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPAYPCMNSS 326
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVMM+QF+YGN+ICEE++L+KAQWSALFEPYLFFE+Y+NYLQVDI+AA+ADD
Sbjct: 327 YNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLFFETYKNYLQVDIIAADADD 386
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G LQCHPYP EY DTSKPC+HCAFFMGLQRK G
Sbjct: 387 LLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMGLQRKEGLRG 446
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
Q GQQFDIRG+V+EF+ INMY FWKPGM+I VSH+RRKQ+P +VFP+G+KR + R
Sbjct: 447 QGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHKRAKPLRHEG 506
Query: 241 QQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQS---ISPQKQDSLSPDHLA---PSS 294
QQ + + Q SG+ K D + EK + ISP + S P+
Sbjct: 507 QQVDTVCADMLQDQSGITEKGKKRKSDHEEEEKEKKQALISPPAEQSPMPEFFGGDPDGK 566
Query: 295 VRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCED 341
S +N + + Q ++ N + I ++T E GS D
Sbjct: 567 WPSSKFANADCHLKVWSSFEQPVSRTDTNGNGTDIATLTKETGSTGD 613
>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 748
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/299 (66%), Positives = 235/299 (78%), Gaps = 8/299 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWDPRKN RD+ H MPIITPAYPCMNSS
Sbjct: 268 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 327
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQVDIVA +A+D
Sbjct: 328 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAGDAED 387
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G
Sbjct: 388 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 447
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R +
Sbjct: 448 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 507
Query: 241 QQ--RSSENGNEYQTGSGL----KRKKDPESVDQ--DGPEKRQSISPQKQDSLSPDHLA 291
Q +S E+G +GS + KRK D E +D + PEKR S+SPQ D +SP+ A
Sbjct: 508 QPGGKSGEDGTVSHSGSVVERHAKRKNDSEMMDARPEKPEKRASLSPQSLDIVSPESSA 566
>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 544
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/257 (74%), Positives = 220/257 (85%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLC+I+E ELGF VWDPR+N RD+ H MPIITPAYPCMNSS
Sbjct: 267 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPAYPCMNSS 326
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVMM+QF+YGN+ICEE++L+KAQWSALFEPYLFFE+Y+NYLQVDI+AA+ADD
Sbjct: 327 YNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLFFETYKNYLQVDIIAADADD 386
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G LQCHPYP EY DTSKPC+HCAFFMGLQRK G
Sbjct: 387 LLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMGLQRKEGLRG 446
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
Q GQQFDIRG+V+EF+ INMY FWKPGM+I VSH+RRKQ+P +VFP+G+KR + R
Sbjct: 447 QGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHKRAKPLRHEG 506
Query: 241 QQRSSENGNEYQTGSGL 257
QQ + + Q SG+
Sbjct: 507 QQVDTVCADMLQDQSGI 523
>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/480 (49%), Positives = 303/480 (63%), Gaps = 49/480 (10%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD+ H MPIITPAYPCMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQVDIVAA+A+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R +
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 QQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLAP 292
+S E+G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++ A
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAI 568
Query: 293 SSVRSGTGSNV-----EPVIPDKRVLNQEIAEGGDV------SNSSVITSVTS------- 334
++ + N+ E + D LN E E D+ S S + V S
Sbjct: 569 TTGWTPPVCNLRRPPSEEIEADN--LNTECTELTDLARNECNSGSEQVLEVDSMAVVQEC 626
Query: 335 -----EVGSCEDVGNESVAGSSEGNNGSVEGSNNPVS-SQSDCCDADSQSLLENRHLDGN 388
+G C + V G +++ + VS S +D S+S +NR +G
Sbjct: 627 SDPAEPLGKCVTPDSVDVVACVSGQEENLDRNLRSVSISGTDSPLLPSRSCGQNRDYEGF 686
Query: 389 G--------------AFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMRLSLTSTA 434
G Q + E+L+ N+ + + +S SE+ QK +RLSL ST
Sbjct: 687 GFPAANSDPMGKKNLYSQSGMSEDLQSNSLVSGMEKSEDRARSES-FQKSQIRLSLKSTV 745
>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 738
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 236/299 (78%), Gaps = 8/299 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD+ H MPIITPAYPCMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQVDIVAA+A+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R +
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 QQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 291
+S E+G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++ A
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSA 567
>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 236/299 (78%), Gaps = 8/299 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD+ H MPIITPAYPCMNSS
Sbjct: 268 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 327
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQVDIVAA+A+D
Sbjct: 328 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 387
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G
Sbjct: 388 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 447
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R +
Sbjct: 448 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 507
Query: 241 QQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 291
+S E+G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++ A
Sbjct: 508 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSA 566
>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 741
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 236/299 (78%), Gaps = 8/299 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD+ H MPIITPAYPCMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQVDIVAA+A+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R +
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 QQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 291
+S E+G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++ A
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSA 567
>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 735
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 236/299 (78%), Gaps = 8/299 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD+ H MPIITPAYPCMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQVDIVAA+A+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R +
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 QQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 291
+S E+G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++ A
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSA 567
>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 765
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 236/299 (78%), Gaps = 8/299 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD+ H MPIITPAYPCMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQVDIVAA+A+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R +
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 QQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 291
+S E+G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++ A
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSA 567
>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 730
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 236/299 (78%), Gaps = 8/299 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD+ H MPIITPAYPCMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQVDIVAA+A+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R +
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 QQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 291
+S E+G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++ A
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSA 567
>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 236/299 (78%), Gaps = 8/299 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD+ H MPIITPAYPCMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQVDIVAA+A+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R +
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 QQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 291
+S E+G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++ A
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSA 567
>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 729
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 236/299 (78%), Gaps = 8/299 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD+ H MPIITPAYPCMNSS
Sbjct: 268 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 327
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQVDIVAA+A+D
Sbjct: 328 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 387
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G
Sbjct: 388 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 447
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R +
Sbjct: 448 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 507
Query: 241 QQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 291
+S E+G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++ A
Sbjct: 508 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSA 566
>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 716
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 236/299 (78%), Gaps = 8/299 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD+ H MPIITPAYPCMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQVDIVAA+A+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R +
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 QQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 291
+S E+G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++ A
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSA 567
>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 800
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/346 (59%), Positives = 250/346 (72%), Gaps = 21/346 (6%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN RD+ H MPIITPAYPCMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GNTIC+E+ELNK WS+LF+ Y+FFE+Y+NYLQVD++AA+A+D
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAADAED 390
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK HCAFFMGLQR G
Sbjct: 391 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGG 450
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+P +VFP GYKR+R R S
Sbjct: 451 QECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQS 510
Query: 241 QQRSSENGNEYQTGSG---------LKRKKDPESVDQ--DGPEKRQSISPQKQDSLSPDH 289
QQ E G+E G G KRK D E ++ + EKR S S D+ SPD
Sbjct: 511 QQ-CREPGDE---GVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPD- 565
Query: 290 LAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSE 335
SS + +G+ ++P R + + G V N + + +V E
Sbjct: 566 ---SSGITTSGTPQIGIVPGPRA--ECLVTGDLVCNVTSLPNVEVE 606
>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 797
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/346 (59%), Positives = 250/346 (72%), Gaps = 21/346 (6%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN RD+ H MPIITPAYPCMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GNTIC+E+ELNK WS+LF+ Y+FFE+Y+NYLQVD++AA+A+D
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAADAED 390
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK HCAFFMGLQR G
Sbjct: 391 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGG 450
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+P +VFP GYKR+R R S
Sbjct: 451 QECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQS 510
Query: 241 QQRSSENGNEYQTGSG---------LKRKKDPESVDQ--DGPEKRQSISPQKQDSLSPDH 289
QQ E G+E G G KRK D E ++ + EKR S S D+ SPD
Sbjct: 511 QQ-CREPGDE---GVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPD- 565
Query: 290 LAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSE 335
SS + +G+ ++P R + + G V N + + +V E
Sbjct: 566 ---SSGITTSGTPQIGIVPGPRA--ECLVTGDLVCNVTSLPNVEVE 606
>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 787
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/346 (59%), Positives = 250/346 (72%), Gaps = 21/346 (6%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN RD+ H MPIITPAYPCMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GNTIC+E+ELNK WS+LF+ Y+FFE+Y+NYLQVD++AA+A+D
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAADAED 390
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK HCAFFMGLQR G
Sbjct: 391 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGG 450
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+P +VFP GYKR+R R S
Sbjct: 451 QECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQS 510
Query: 241 QQRSSENGNEYQTGSG---------LKRKKDPESVDQ--DGPEKRQSISPQKQDSLSPDH 289
QQ E G+E G G KRK D E ++ + EKR S S D+ SPD
Sbjct: 511 QQ-CREPGDE---GVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPD- 565
Query: 290 LAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSE 335
SS + +G+ ++P R + + G V N + + +V E
Sbjct: 566 ---SSGITTSGTPQIGIVPGPRA--ECLVTGDLVCNVTSLPNVEVE 606
>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 786
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/346 (59%), Positives = 250/346 (72%), Gaps = 21/346 (6%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN RD+ H MPIITPAYPCMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GNTIC+E+ELNK WS+LF+ Y+FFE+Y+NYLQVD++AA+A+D
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAADAED 390
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK HCAFFMGLQR G
Sbjct: 391 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGG 450
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+P +VFP GYKR+R R S
Sbjct: 451 QECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQS 510
Query: 241 QQRSSENGNEYQTGSG---------LKRKKDPESVDQ--DGPEKRQSISPQKQDSLSPDH 289
QQ E G+E G G KRK D E ++ + EKR S S D+ SPD
Sbjct: 511 QQ-CREPGDE---GVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPD- 565
Query: 290 LAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSE 335
SS + +G+ ++P R + + G V N + + +V E
Sbjct: 566 ---SSGITTSGTPQIGIVPGPRA--ECLVTGDLVCNVTSLPNVEVE 606
>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 788
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/294 (65%), Positives = 227/294 (77%), Gaps = 7/294 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVY WRWPNPVMLC I+E EL F VWDPRKN RD+ H MPIITPAYPCMNSS
Sbjct: 272 MLVSRFFRVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 331
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM +QFQ+GNTIC+E+ELNK QWS+LFE Y+FFE+Y+NYLQVD++A +A+D
Sbjct: 332 YNVSQSTLRVMTEQFQFGNTICQEIELNKQQWSSLFEQYMFFEAYKNYLQVDVLALDAED 391
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
LLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK HCAFFMGLQR G
Sbjct: 392 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKKFRHCAFFMGLQRAEGFGG 451
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+P +VFP+GYKR R R +
Sbjct: 452 QECQQFDIRGTVDEFRQEVNMYMFWRPGMDVYVSHVRRRQLPSFVFPKGYKRPRQSRHQN 511
Query: 241 QQ-RSSENGNEYQTGSGL----KRKKDPESVDQ--DGPEKRQSISPQKQDSLSP 287
QQ R G + KRK D E++D + EKR S SP D++SP
Sbjct: 512 QQCREPGEGVVGSLSDSVDGYAKRKNDNETMDTRPEKREKRASRSPHSLDAVSP 565
>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 680
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/367 (53%), Positives = 248/367 (67%), Gaps = 21/367 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLCAI+ +LGFS+WDPRKN RD+ H MPIITPAYPCMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSS 327
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRV+M+QFQ+GN +C+E+ELNKA W+ALFEP+ FFE+YR +L VDIVA + DD
Sbjct: 328 YNVSTSTLRVIMEQFQFGNKVCQEIELNKANWNALFEPFHFFEAYRKFLVVDIVAEDDDD 387
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGW+ESRLRQLTL IERDT G LQCHPYP EY D + CAHCAF+MGL RK G +
Sbjct: 388 LRLWKGWIESRLRQLTLKIERDTKGILQCHPYPCEYSDPTIECAHCAFYMGLSRKEG-LK 446
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
+ GQQFDIRG+V+EF I MY WKPGM++ V+H+ R+Q+P YVF +GYK+ A+
Sbjct: 447 KRGQQFDIRGTVDEFMREIGMYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCPTMHAN 506
Query: 241 QQRSSENGNEYQ--TGSGLKRKKDPES---VDQDGPEKRQSISPQKQDSLSPDHLAPSSV 295
QQ S+ + S LKRK + VD KR S+SP +P HL
Sbjct: 507 QQEQSDGDGTFSPYLESQLKRKYISDGDGHVDLCKSVKRASVSPPGVG--TPPHL----- 559
Query: 296 RSGTGSNVEPVIPDK--RVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNE--SVAGSS 351
G++V V+ D + ++ + G S+S ++ + G+E S +G+S
Sbjct: 560 ----GNSVSNVVCDSPVKFVSSVVCSGAHASSSHDDINIEQAQLTTSPYGSEDTSASGTS 615
Query: 352 EGNNGSV 358
G+V
Sbjct: 616 CAAVGAV 622
>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
Length = 548
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/273 (63%), Positives = 209/273 (76%), Gaps = 12/273 (4%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLC I+E LG SVWDPRKN RD+TH MPIITPAYPCMNSS
Sbjct: 258 MLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPIITPAYPCMNSS 317
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS+STLRVM+++F N ICE +E+NKA+WSALFEPY FF++Y+NYLQ+D+ AA+ DD
Sbjct: 318 YNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAFFDAYKNYLQIDVFAADNDD 377
Query: 121 LLAWKGWVESRLRQLTLM------IERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQR 174
L WKGWVESRLRQLTL IE+ TYG LQCHP+P ++VD SK HCAFFMGLQ+
Sbjct: 378 LRRWKGWVESRLRQLTLKVGLDREIEKHTYGMLQCHPHPCDFVDESKEGKHCAFFMGLQK 437
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ G QEGQQFDIR +VEEF+ S+ Y WK GM+I VSH+RR+QIP YVFP G K R
Sbjct: 438 RQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQIPAYVFPGGTKPAR 497
Query: 235 HPRLASQQRSSENGN------EYQTGSGLKRKK 261
P+L+S +++ E G+ Y +G +R K
Sbjct: 498 PPKLSSSRKAREAGSIRGCNTSYVIEAGCERSK 530
>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
Length = 672
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/284 (61%), Positives = 213/284 (75%), Gaps = 6/284 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLCAI+ +LGFS+WDPRKN RD+ H MPIITPAYPCMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSS 327
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS+STLRV+M+QFQ+GN IC+E+ELNKA W+ALFEP+ FFE+YR +L VDIVA N DD
Sbjct: 328 YNVSSSTLRVIMEQFQFGNKICQEIELNKANWNALFEPFHFFEAYRKFLVVDIVAENDDD 387
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGW+ESRLRQLTL I+RDT G LQCHPYP EY D + CAHCAF+MGL RK G
Sbjct: 388 LRLWKGWIESRLRQLTLKIDRDTKGILQCHPYPCEYSDPTIECAHCAFYMGLSRKEGS-K 446
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
+ GQQFDIRG+V+EF I MY W PGM++ V+H++R+Q+P YVF +GYK+ A+
Sbjct: 447 KRGQQFDIRGTVDEFMREIGMYSLWMPGMDLAVTHVQREQVPSYVFEQGYKKPCPTMHAN 506
Query: 241 QQRSSENGNEYQ--TGSGLKRKKDPES---VDQDGPEKRQSISP 279
QQ S+ S LKRK D + V+ K S+SP
Sbjct: 507 QQEQSDGDVTLSPYLDSQLKRKYDSDGDGHVELHKSVKWASVSP 550
>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
Length = 496
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 166/239 (69%), Positives = 195/239 (81%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLC I+E LG SVWDPRKN RD+TH MPIITPAYPCMNSS
Sbjct: 258 MLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPIITPAYPCMNSS 317
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS+STLRVM+++F N ICE +E+NKA+WSALFEPY FF++Y+NYLQ+D+ AA+ DD
Sbjct: 318 YNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAFFDAYKNYLQIDVFAADNDD 377
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IE+ TYG LQCHP+P ++VD SK HCAFFMGLQ++ G
Sbjct: 378 LRRWKGWVESRLRQLTLKIEKHTYGMLQCHPHPCDFVDESKEGKHCAFFMGLQKRQGLPS 437
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA 239
QEGQQFDIR +VEEF+ S+ Y WK GM+I VSH+RR+QIP YVFP G K R P++
Sbjct: 438 QEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQIPAYVFPGGTKPARPPKVT 496
>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 163/245 (66%), Positives = 194/245 (79%), Gaps = 1/245 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E LG SVWDPR+N +D+ H MPIITPAYPCMNS+
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPCMNST 323
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNV++STLRVM D+F+ G+ ICE +E +KA W LFEPY FFESY+NYLQ+DI A NADD
Sbjct: 324 YNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDITAENADD 383
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IER TYG LQCHP+P E+ D S+P HC +FMGLQRK G V
Sbjct: 384 LRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHC-YFMGLQRKQGVPV 442
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
EG+QFDIR +VEEFK S+N Y WKPGM I VSH++R+ IP Y+FP G + T ++ +
Sbjct: 443 NEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHVSHVKRRNIPNYIFPGGVRPTFPSKVTA 502
Query: 241 QQRSS 245
+ + S
Sbjct: 503 ENKQS 507
>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/303 (57%), Positives = 213/303 (70%), Gaps = 14/303 (4%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E LG VWDPR+N +D+ H MPIITP YPCMNS+
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPIITPVYPCMNST 323
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNV++STLRVM D+F+ G+ ICE +E +KA W LFEPY FFESY+NYLQ+DI A NADD
Sbjct: 324 YNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDITAENADD 383
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWV SRLRQLTL IER TYG LQCHP+P E+ D S+P HC +FMGLQRK G V
Sbjct: 384 LRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHC-YFMGLQRKQGVPV 442
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
EG+QFDIR +VEEFK S+N Y WKPGM+I VSH++R IP Y+FP G + T ++ +
Sbjct: 443 NEGEQFDIRLTVEEFKHSVNAYTLWKPGMDIHVSHVKRSNIPNYIFPGGVRPTFPSKVTA 502
Query: 241 QQRSSENGNEYQTGSGLKRKKDPE-----SVDQDGPEKRQ----SISPQKQDSLSPDHLA 291
+ + S SG + + P+ +V D KR+ ++ ++S SP L
Sbjct: 503 ENKQSSKSR----ASGHGQTEKPQGGKAVAVGADDVRKRKRSEDNMDNNPRNSRSPVSLP 558
Query: 292 PSS 294
P S
Sbjct: 559 PPS 561
>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
Length = 752
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 166/275 (60%), Positives = 201/275 (73%), Gaps = 15/275 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E LG SVWDPR+N RD+ H MPIITPAYPCMNS+
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHLMPIITPAYPCMNST 323
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNV+TSTLR+M D+F+ G ICE +E +KA W LFEPY FFE+Y+NYLQ+DI A N DD
Sbjct: 324 YNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPFFEAYKNYLQIDITAENPDD 383
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IE+ TYG LQCHPYP E+ D S+ C +FMGLQRK G V
Sbjct: 384 LRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSFHQC-YFMGLQRKQGVPV 442
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY---------- 230
EG+QFDIR +VEEFK ++N Y WKPGM+I VSH++R+ IP ++FP G
Sbjct: 443 SEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNIPNFIFPGGVRPSVPSRVNG 502
Query: 231 --KRTRHPRLASQQRS--SENGNEYQTGSGLKRKK 261
+R+ R+A Q +S S+ G G+ +RK+
Sbjct: 503 ENRRSSKSRVAGQSQSEKSQGGKAVVLGADDERKR 537
>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 164/248 (66%), Positives = 199/248 (80%), Gaps = 4/248 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E LG SVWDPR+N +D+ H MPIITPAYP MNSS
Sbjct: 258 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPSMNSS 317
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS+STLR+M ++FQ GN ICE +E++KA+W LFEP+ FFE+Y+NYLQ+DI A N DD
Sbjct: 318 YNVSSSTLRIMTEEFQRGNEICEAMEVSKAEWDTLFEPFSFFEAYKNYLQIDISAENEDD 377
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IER TY LQCHP+P E+ D S+P HC++FMGLQRK G V
Sbjct: 378 LRQWKGWVESRLRQLTLKIERHTYNMLQCHPHPGEFSDKSRPL-HCSYFMGLQRKQGVPV 436
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
EG+QFDIR +V+EFK S+NMY WKPGMEI V+H++++ IP +VFP G + +R P A+
Sbjct: 437 NEGEQFDIRITVDEFKNSVNMYTLWKPGMEIRVTHVKKRNIPNFVFPSGVRPSR-PSKAT 495
Query: 241 Q--QRSSE 246
+RSSE
Sbjct: 496 WDGRRSSE 503
>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
Length = 770
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 213/304 (70%), Gaps = 12/304 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E LG VWDPR+N +D+ H MPIITPAYP MNSS
Sbjct: 266 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPSMNSS 325
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLR+M ++FQ GN ICE +E +KA W+ LFE + FF++Y+NYLQ+DI A N DD
Sbjct: 326 YNVSASTLRIMSEEFQRGNEICEAMEASKADWNTLFESFSFFDAYKNYLQIDIGAENEDD 385
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IER T+ LQCHP+P E+ D S+P HC++FMGLQRK G
Sbjct: 386 LRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGEFTDKSRPL-HCSYFMGLQRKQGVPA 444
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA- 239
EG+QFDIR +VEEFK+S+NMY WKPGMEI V+H++R+ IP +VFP G + +R +
Sbjct: 445 NEGEQFDIRITVEEFKISVNMYTSWKPGMEIHVTHVKRRNIPSFVFPGGIRPSRPSKTTW 504
Query: 240 -SQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLS-PDHLAPSSVRS 297
S++ S+E E G G+ + D G KR + ++ PD +P S
Sbjct: 505 DSKRSSAEKSGE---GKGVS-----DGSDDKGKRKRIDDNVANATKIAKPDSTSPLSGEV 556
Query: 298 GTGS 301
GS
Sbjct: 557 NNGS 560
>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 757
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 159/243 (65%), Positives = 191/243 (78%), Gaps = 1/243 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E LG VWDPRK +D+ H MPIITPAYPCMNSS
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSS 323
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS+STLR+M ++F+ GN I E +E NKA W+ L EPY FFE+Y+NYLQ++I A NADD
Sbjct: 324 YNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEIAAENADD 383
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IER TY LQCHP+P ++ D S+P HC +FMGLQRK G
Sbjct: 384 LRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPF-HCCYFMGLQRKQGVPA 442
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
EG+QFDIR +V+EFK S+ MY WKPGMEI V H+RR+ IP +VFP G + +R ++AS
Sbjct: 443 SEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRPTKVAS 502
Query: 241 QQR 243
++R
Sbjct: 503 ERR 505
>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 652
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 182/296 (61%), Positives = 222/296 (75%), Gaps = 13/296 (4%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
MLVSRFFRV+T W+WPNPVMLCAI+ + LGF+VWDPRKN RD++H MPIITPAYPCMNS
Sbjct: 239 MLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNS 298
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
SYNVSTSTLRV+M+QFQ+GN IC+E+ELNKA WS+LFEP+ FFE+Y YL VDIVA + D
Sbjct: 299 SYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVADDDD 358
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
DL WKGW+ESRLRQLTL IERDT G LQCHP P EY D S CAHCAF+MGL RK G
Sbjct: 359 DLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKEGMK 418
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPR-- 237
++ GQ+FDIRG+V+EF I MY WK GM++ V+H+R+K+IP YVF +G ++TR P
Sbjct: 419 IR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRPPTPI 477
Query: 238 LASQQ-RSSENGNEYQTGS-----GLKRKKDP---ESVDQDGPEKRQSISPQKQDS 284
A QQ RS +N +E T + LKRK D VD +R S+SP +++
Sbjct: 478 CAEQQDRSGKNDSEVCTTTVSLVGQLKRKYDSVGGADVDSFKSVRRASVSPACEEA 533
>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
Length = 712
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 158/238 (66%), Positives = 185/238 (77%), Gaps = 1/238 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLV RFFRVYT WRWPNPVMLCAI+E LG VWDPRKN RD+ H MPIITPAYPCMNSS
Sbjct: 264 MLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPRDRLHQMPIITPAYPCMNSS 323
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS+STLRVM ++FQ N ICEE+ELNK W+ LFE Y FFE+Y+NYL++DI A ADD
Sbjct: 324 YNVSSSTLRVMTEEFQRSNQICEELELNKVCWNILFETYPFFEAYKNYLEIDISAEGADD 383
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGW ESRLR LTL IER T+G LQCHP+P ++ D +P HC FFMGLQRK G +
Sbjct: 384 LRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDFSDPQRP-YHCCFFMGLQRKQGMPI 442
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRL 238
QEG+QFDIR +V+EF+ S+ MY WK GMEI VSHIRR+ IP +VFP G + R ++
Sbjct: 443 QEGEQFDIRVTVDEFRHSVKMYTLWKQGMEINVSHIRRRNIPLFVFPGGVRPPRTTKM 500
>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
Length = 1097
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 167/276 (60%), Positives = 204/276 (73%), Gaps = 9/276 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E LG VWDPRK +D+ H MPIITPAYPCMNSS
Sbjct: 444 MLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSS 503
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS+STLR+M ++F+ GN I E +E NKA W L EPY FFE+Y+NYLQ++I A NADD
Sbjct: 504 YNVSSSTLRIMSEEFKRGNEISEVMEANKADWXTLCEPYPFFEAYKNYLQIEIAAENADD 563
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IER TY LQCHP+P ++ D S+P HC +FMGLQRK G
Sbjct: 564 LRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPF-HCCYFMGLQRKQGVPA 622
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
EG+QFDIR +V+EFK S+ MY WKPGMEI V H+RR+ IP +VFP G + +R ++AS
Sbjct: 623 SEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRPTKVAS 682
Query: 241 QQRSSENGNEYQTGSGL-------KRKKDPESVDQD 269
++R N T + L KRK++ E+V+ +
Sbjct: 683 ERRRVLEPN-VSTQAVLEGAEDSKKRKREDENVETN 717
>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
Length = 822
Score = 350 bits (898), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 168/281 (59%), Positives = 199/281 (70%), Gaps = 15/281 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLC I E LG VWDPR+N +DK H MPIITPAYPCMNSS
Sbjct: 294 MLVSRFFRVYTQWRWPNPVMLCTIKEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 353
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLRVM ++FQ G+ ICE +E NKA W LFEPY FFESY+NYL++DI A N DD
Sbjct: 354 YNVSLSTLRVMTEEFQRGDEICEAMEANKADWDTLFEPYPFFESYKNYLRIDISAENVDD 413
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWV+SRLRQLTL IER+TYG LQCHP+P ++ D S+P HC++FMGLQRK G
Sbjct: 414 LRNWKGWVKSRLRQLTLKIERNTYGMLQCHPHPGDFSDKSRP-LHCSYFMGLQRKQGVPA 472
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY---------- 230
EG QFD+R +VEEFK S+N Y WKPGM I +SH++R+ IP +VFP G
Sbjct: 473 NEGGQFDMRLTVEEFKHSVNAYTQWKPGMNISISHVKRRNIPAFVFPGGVRPKCPSKVTW 532
Query: 231 --KRTRHPRLA--SQQRSSENGNEYQTGSGLKRKKDPESVD 267
KR R++ Q S+ G E + KRK+ +S D
Sbjct: 533 VSKRRSELRVSGHGQAEKSQVGKELGANNDRKRKQAEDSGD 573
>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 716
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 152/231 (65%), Positives = 180/231 (77%), Gaps = 1/231 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML SRFFRVY WRWPNPV+LC++DE G VWDPR+N +D+ H MPIITPAYPCMNSS
Sbjct: 259 MLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPKDRLHIMPIITPAYPCMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLR+M +FQ G ICE +E NKA W LFEP+ FFE+Y+NYLQ+DI AAN +D
Sbjct: 319 YNVSASTLRIMTGEFQRGKEICEAMEANKADWDTLFEPFAFFEAYKNYLQIDISAANVND 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IER TY LQCHP+PH++ D S+P HC++FMGLQRK G
Sbjct: 379 LRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDASRPL-HCSYFMGLQRKQGVPA 437
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
EG+QFDIR +VEEFK ++N Y W PGMEI VSHI+R+ +P YVFP G +
Sbjct: 438 AEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVSHIKRRSLPNYVFPGGVR 488
>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
Length = 610
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/296 (60%), Positives = 221/296 (74%), Gaps = 13/296 (4%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
MLVSRFFRV+T W+WPNPVMLCAI+ + LGF+VWDPRKN RD++H MPIITPAYPCMNS
Sbjct: 271 MLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNS 330
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
SYNVSTSTLRV+M+QFQ+GN IC+E+ELNKA WS+LFEP+ FFE+Y YL VDIVA + D
Sbjct: 331 SYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVADDDD 390
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
DL WKGW+ESRLRQLTL IERDT G LQCHP P EY D S CAHCAF+MGL RK G
Sbjct: 391 DLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKEGMK 450
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPR-- 237
++ GQ+FDIRG+V+EF I MY WK GM++ V+H+R+K+IP YVF +G ++TR P
Sbjct: 451 IR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRPPTPI 509
Query: 238 LASQQ-RSSENGNEYQTGSG-----LKRKKDP---ESVDQDGPEKRQSISPQKQDS 284
A QQ +S +N +E T + LKRK VD +R S+SP +++
Sbjct: 510 CAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVSPACEEA 565
>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
Length = 602
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 180/296 (60%), Positives = 221/296 (74%), Gaps = 13/296 (4%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
MLVSRFFRV+T W+WPNPVMLCAI+ + LGF+VWDPRKN RD++H MPIITPAYPCMNS
Sbjct: 263 MLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNS 322
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
SYNVSTSTLRV+M+QFQ+GN IC+E+ELNKA WS+LFEP+ FFE+Y YL VDIVA + D
Sbjct: 323 SYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVADDDD 382
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
DL WKGW+ESRLRQLTL IERDT G LQCHP P EY D S CAHCAF+MGL RK G
Sbjct: 383 DLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKEGMK 442
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPR-- 237
++ GQ+FDIRG+V+EF I MY WK GM++ V+H+R+K+IP YVF +G ++TR P
Sbjct: 443 IR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRPPTPI 501
Query: 238 LASQQ-RSSENGNEYQTGSG-----LKRKKDP---ESVDQDGPEKRQSISPQKQDS 284
A QQ +S +N +E T + LKRK VD +R S+SP +++
Sbjct: 502 CAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVSPACEEA 557
>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
Length = 683
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 179/296 (60%), Positives = 220/296 (74%), Gaps = 13/296 (4%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
MLVSRFFRV+T W+WPNPVMLCAI+ + LGF+VWDPRKN RD++H MPIITPAYPCMNS
Sbjct: 270 MLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNS 329
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
SYNVSTSTLRV+M+QFQ+GN IC+E+ELNKA WS+LFEP+ FFE+Y YL VDIVA + D
Sbjct: 330 SYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVADDDD 389
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
DL WKGW+ESRLRQLTL IERDT G LQCHP P EY D S CAHCAF+MGL RK G
Sbjct: 390 DLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKEGMK 449
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPR-- 237
++ GQ+FDIRG+V+EF I MY WK GM++ V+H+ +K+IP YVF +G ++TR P
Sbjct: 450 IR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVCKKEIPLYVFEQGCQKTRPPTPI 508
Query: 238 LASQQ-RSSENGNEYQTGSG-----LKRKKDP---ESVDQDGPEKRQSISPQKQDS 284
A QQ +S +N +E T + LKRK VD +R S+SP +++
Sbjct: 509 CAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVSPACEEA 564
>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
Length = 534
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 160/248 (64%), Positives = 194/248 (78%), Gaps = 2/248 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDE-AELGF-SVWDPRKNRRDKTHHMPIITPAYPCMNS 59
LVSRFFRVYT WRWPNPVMLC I+E + LG VWDPRKN RDK+H MPIITPAYPCMNS
Sbjct: 247 LVSRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAYPCMNS 306
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
SYNVSTSTLR+M +F GN +CE++E+++A W LFE + FFE+YRNYLQ+D+VA +
Sbjct: 307 SYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESFSFFEAYRNYLQIDVVAIDDC 366
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
D WKGWVESRLRQLTL +E+DTYG LQCHP+P ++VD ++ HCA+FMGLQRK G
Sbjct: 367 DHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGLQRKLGAP 426
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA 239
+ EGQQFDIR +VE+FKL++ Y WKPGMEI VSH+RRKQIP +V+P G K R R
Sbjct: 427 LHEGQQFDIRTTVEQFKLNVAAYTSWKPGMEIYVSHVRRKQIPLFVYPGGVKPARPARQH 486
Query: 240 SQQRSSEN 247
S SS++
Sbjct: 487 SGSPSSDS 494
>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 156/230 (67%), Positives = 182/230 (79%), Gaps = 1/230 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT WRWPNPVMLCAI+E LG VWDPRK +D+ H MPIITPAYPCMNSS
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSS 323
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS+STLR+M ++F+ GN I E +E NKA W+ L EPY FFE+Y+NYLQ++I A NADD
Sbjct: 324 YNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEIAAENADD 383
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IER TY LQCHP+P ++ D S+P HC +FMGLQRK G
Sbjct: 384 LRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPF-HCCYFMGLQRKQGVPA 442
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 230
EG+QFDIR +V+EFK S+ MY WKPGMEI V H+RR+ IP +VFP GY
Sbjct: 443 SEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGY 492
>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 166/269 (61%), Positives = 197/269 (73%), Gaps = 16/269 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT W WPNPVMLC I++ ELGF VWDPR+N D+ HHMPIITPAYP MNSS
Sbjct: 259 MLVSRFFRVYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPLDRNHHMPIITPAYPNMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
Y+VSTSTL MM QF N IC ++ELNK+ W ALFEP+LFF SY+NYLQVDI A +ADD
Sbjct: 319 YSVSTSTLEAMMKQFHTANKICNDIELNKSSWGALFEPFLFFRSYQNYLQVDITATDADD 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L AWKGWVESRLRQLTL +ER T GKL C P P EYVDTS+ C HC +FMGL++KPG V
Sbjct: 379 LRAWKGWVESRLRQLTLKVERCTIGKLLCVPCPREYVDTSRQCCHCTYFMGLRKKPG--V 436
Query: 181 QEGQQFDIRGSVEEFKLSI-NMYMFWKPGMEICVSHIRRKQIPPYVFPEGY-KRTRHPRL 238
+ G+ DIR + +EFK I NM+ FW PGMEI VSH+ + Q+P YVFP+ Y KR++ +
Sbjct: 437 EVGEVIDIRVATQEFKEEIVNMFSFWTPGMEIHVSHVLKNQLPSYVFPDEYRKRSQSSKS 496
Query: 239 ASQQRSSENGNEYQTGSGLKRKKDPESVD 267
+QQ + KRK + E VD
Sbjct: 497 INQQHQN------------KRKINSEMVD 513
>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 748
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/390 (47%), Positives = 244/390 (62%), Gaps = 30/390 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T WRWPNPVMLCA +E LG VWDPR+N +D+ H MPIITPAYPCMNSS
Sbjct: 264 MLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPCMNSS 323
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLR+M ++F+ G+ ICE +E NK+ W LFEPY FFE+Y+NYLQ+DI A N DD
Sbjct: 324 YNVSASTLRIMTEEFRRGHDICEVMEENKSDWDTLFEPYPFFEAYKNYLQIDITAENDDD 383
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
+ WKGWVESRLRQLTL IER TY LQCHPYP ++ D S+P HC +FMGLQRK G
Sbjct: 384 IRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFSDKSRPFHHC-YFMGLQRKQGGPA 442
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
G+QFDIR +V+EFK S+N+Y K GMEI VSH++R+ IP +VFP G + +R +L
Sbjct: 443 SGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKRRSIPNFVFPGGVRPSRASKLTW 502
Query: 241 QQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTG 300
R S + + ES+D D KR I D A +++R+G
Sbjct: 503 DIRRSSELKASDSTQVDSPSEATESLDGDDRRKRIRI----------DDNANTNLRNGEC 552
Query: 301 SNVEPVIPDKRVLNQEIAEGGDVSNSSV-----ITSVTSEVGSCEDVGNESVAGSSEGNN 355
+ P +E+ E VSN+S + + + + E++ + V+ + G++
Sbjct: 553 LAMAHSHP------EEVHEVSQVSNTSSCSIKDVNFIPTSANNLENLAD--VSSQNNGDH 604
Query: 356 GS--VEGSNNPVS----SQSDCCDADSQSL 379
GS V S N VS S+C +A+ ++
Sbjct: 605 GSLRVSPSTNNVSDAAADTSNCKEAEKLAI 634
>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
Length = 534
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 158/248 (63%), Positives = 193/248 (77%), Gaps = 2/248 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDE-AELGF-SVWDPRKNRRDKTHHMPIITPAYPCMNS 59
L+SRFFRVYT WRWPNPVMLC I+E + LG VWDPRKN RDK+H MPIITPAYPCMNS
Sbjct: 247 LISRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAYPCMNS 306
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
SYNVSTSTLR+M +F GN +CE++E+++A W LFE + FFE+YRNYLQ+D+VA +
Sbjct: 307 SYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESFSFFEAYRNYLQIDVVAIDDC 366
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
D WKGWVESRLRQLTL +E+DTYG LQCHP+P ++VD ++ HCA+FMGLQRK G
Sbjct: 367 DHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGLQRKLGAP 426
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA 239
+ EGQQFDIR +VE+FKL++ Y WK GMEI VSH+RRKQIP +V+P G K R R
Sbjct: 427 LHEGQQFDIRTTVEQFKLNVAAYTSWKQGMEIYVSHVRRKQIPLFVYPGGVKPARPARQH 486
Query: 240 SQQRSSEN 247
S SS++
Sbjct: 487 SGSPSSDS 494
>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
thaliana gb|AF255297 and contains a
Nucleotidyltransferase PF|01909 domain. ESTs
gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
from this gene [Arabidopsis thaliana]
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 713
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 147/231 (63%), Positives = 176/231 (76%), Gaps = 2/231 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+LVSRFFRV+ W WPN + LC+ DE LG VWDPR N +D+ H MPIITPAYPCMNSS
Sbjct: 259 ILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYPCMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLR+M +FQ GN ICE +E NKA W LFEP+ FFE+Y+NYLQ+DI AAN DD
Sbjct: 319 YNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQIDISAANVDD 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IER + L CHP+PH++ DTS+P HC++FMGLQRK G
Sbjct: 379 LRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPL-HCSYFMGLQRKQGVPA 436
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
EG+QFDIR +VEEFK ++N Y W PGMEI V HI+R+ +P +VFP G +
Sbjct: 437 AEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGVR 487
>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 586
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 147/231 (63%), Positives = 176/231 (76%), Gaps = 2/231 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+LVSRFFRV+ W WPN + LC+ DE LG VWDPR N +D+ H MPIITPAYPCMNSS
Sbjct: 132 ILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYPCMNSS 191
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STLR+M +FQ GN ICE +E NKA W LFEP+ FFE+Y+NYLQ+DI AAN DD
Sbjct: 192 YNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQIDISAANVDD 251
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IER + L CHP+PH++ DTS+P HC++FMGLQRK G
Sbjct: 252 LRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPL-HCSYFMGLQRKQGVPA 309
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
EG+QFDIR +VEEFK ++N Y W PGMEI V HI+R+ +P +VFP G +
Sbjct: 310 AEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGVR 360
>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
Length = 468
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 142/184 (77%), Positives = 162/184 (88%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLC+I+E E+GF VWDPRKN RD+ HHMPIITPAYPCMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTSTLRVM++QFQ+GN IC+E+E+NKA WSALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 319 YNVSTSTLRVMVEQFQFGNKICQEIEMNKASWSALFEPFQFFEAYKNYLQVDIIAEDDED 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G +
Sbjct: 379 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 438
Query: 181 QEGQ 184
QEG
Sbjct: 439 QEGH 442
>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 143/237 (60%), Positives = 177/237 (74%), Gaps = 1/237 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+L+SRFFRVY WRWPNPVMLCAI+E LG VWDPR+N RD++H MPIITP YPC NSS
Sbjct: 255 VLLSRFFRVYKQWRWPNPVMLCAIEEGPLGLPVWDPRRNPRDRSHLMPIITPTYPCQNSS 314
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+NVS STLRVM ++F+ G++IC+ ++ A WS LFEPY FFESY+NYLQ+DI A + +D
Sbjct: 315 FNVSNSTLRVMTEEFKRGDSICDSLDSKVADWSKLFEPYPFFESYKNYLQIDISAGDEED 374
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQL L +E+DT+G LQCHP+P + DTSK C+FF+ LQRK G
Sbjct: 375 LRIWKGWVESRLRQLILKVEKDTFGALQCHPHPSAFHDTSKRVQVCSFFVALQRKQG-AP 433
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPR 237
FD+ ++ EFK S+N Y+ WKP M+I VSH+R KQIP YVFP G + R PR
Sbjct: 434 PSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIHVSHVRPKQIPTYVFPNGIRPVRPPR 490
>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/261 (58%), Positives = 186/261 (71%), Gaps = 4/261 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LVSRFFRVYT WRWPNPVMLC I+E LG VWDPR+N +D+ H MPIITPAYP MNSSY
Sbjct: 264 LVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPAYPSMNSSY 323
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS STLR+M ++ Q GN I +E+E W LFEP+LFFE+Y+NYLQ+DI A N DL
Sbjct: 324 NVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLFFEAYKNYLQIDITAENDVDL 383
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 181
WKGWVESRLR LT IERDT G LQCHP+P E+ DTS+ +C +FMGL+RK G Q
Sbjct: 384 RNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSFHYC-YFMGLRRKEGSAAQ 442
Query: 182 EGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQ 241
EG+QFDIR +V++FK ++ MY WK GM I V HIRRK IP +VFP G + + ++A +
Sbjct: 443 EGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPPQPMKVAGE 502
Query: 242 QRSSENGNEYQTGSGLKRKKD 262
Q + + KRK+D
Sbjct: 503 QGQVSKPMGFNSQ---KRKRD 520
>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 141/237 (59%), Positives = 177/237 (74%), Gaps = 1/237 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+L+SRFFRVY WRWPNPVMLCAI+E LG +WDPRKN RD++H MPIITP YPC NSS
Sbjct: 259 VLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPRDRSHLMPIITPTYPCQNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+NVS STLRVM ++F+ G+ +C+ ++ A WS LFEPY FFESY+NYLQ++I A + +D
Sbjct: 319 FNVSNSTLRVMTEEFKRGDGVCDSLDSKVADWSKLFEPYPFFESYKNYLQIEITAGDEED 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLRQL L +E+DT+G LQCHP+P+ + DTSK C+FF+ LQRK G
Sbjct: 379 LRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTSKKVQVCSFFVALQRKQG-AQ 437
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPR 237
FD+ ++ EFK S+N Y+ WKP M+I VSH+R KQIP YVFP G + R PR
Sbjct: 438 HSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIGVSHVRPKQIPTYVFPNGIRPVRPPR 494
>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 587
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 148/241 (61%), Positives = 179/241 (74%), Gaps = 1/241 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LVSRFFRVYT WRWPNPVMLC I+E LG VWDPR+N +D+ H MPIITPAYP MNSSY
Sbjct: 264 LVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPAYPSMNSSY 323
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS STLR+M ++ Q GN I +E+E W LFEP+LFFE+Y+NYLQ+DI A N DL
Sbjct: 324 NVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLFFEAYKNYLQIDITAENDVDL 383
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 181
WKGWVESRLR LT IERDT G LQCHP+P E+ DTS+ +C +FMGL+RK G Q
Sbjct: 384 RNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSFHYC-YFMGLRRKEGSAAQ 442
Query: 182 EGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQ 241
EG+QFDIR +V++FK ++ MY WK GM I V HIRRK IP +VFP G + + ++A +
Sbjct: 443 EGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPPQPMKVAGE 502
Query: 242 Q 242
Q
Sbjct: 503 Q 503
>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
Length = 750
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 142/241 (58%), Positives = 174/241 (72%), Gaps = 1/241 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML+SRFFRVY+ W+WPNPVMLC I+E LG VWDPR+N RD+ H MPIITPAYPCMNSS
Sbjct: 259 MLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPAYPCMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS ST VM +F IC+ ++ KA W ALFEPY FFESY+NYL+V+I A N D+
Sbjct: 319 YNVSVSTRYVMTQEFTRAFEICQAIDEGKADWDALFEPYPFFESYKNYLEVNITARNEDE 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L +WKGWVESRLR L L IER ++ + HPYP ++ D S+P HC +FMGL RK
Sbjct: 379 LRSWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPL-HCFYFMGLWRKQTTQT 437
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE +QFDIRG V EFK +I Y WK GM+I VSH++RK+IP +VFP G + +R R A
Sbjct: 438 QEAEQFDIRGIVNEFKNTICAYQQWKEGMDIEVSHVKRKEIPLFVFPGGVRPSRSSRTAH 497
Query: 241 Q 241
+
Sbjct: 498 K 498
>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
Length = 748
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 139/242 (57%), Positives = 174/242 (71%), Gaps = 1/242 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML+SRFF+VY+ W+WPNPVMLC I+E LG VWDPR+N RD+ HHMPIITPAYP MNSS
Sbjct: 259 MLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS ST VM+ +F + IC+ ++ KA W ALFEPY FFESYRNYL+++I A N DD
Sbjct: 319 YNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITARNEDD 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLR L L IER T L HP P +++D+S+P HC +FMGL +K
Sbjct: 379 LRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLWKKQISQA 437
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE +Q+DIR V EFK +I+ Y W+ GMEI VSH++RK IP +VFP G + +R R
Sbjct: 438 QEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVG 497
Query: 241 QQ 242
++
Sbjct: 498 KE 499
>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
Length = 748
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 139/242 (57%), Positives = 174/242 (71%), Gaps = 1/242 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML+SRFF+VY+ W+WPNPVMLC I+E LG VWDPR+N RD+ HHMPIITPAYP MNSS
Sbjct: 259 MLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS ST VM+ +F + IC+ ++ KA W ALFEPY FFESYRNYL+++I A N DD
Sbjct: 319 YNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITARNEDD 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLR L L IER T L HP P +++D+S+P HC +FMGL +K
Sbjct: 379 LRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLWKKQISQA 437
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE +Q+DIR V EFK +I+ Y W+ GMEI VSH++RK IP +VFP G + +R R
Sbjct: 438 QEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVG 497
Query: 241 QQ 242
++
Sbjct: 498 KE 499
>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
Length = 769
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 139/242 (57%), Positives = 174/242 (71%), Gaps = 1/242 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML+SRFF+VY+ W+WPNPVMLC I+E LG VWDPR+N RD+ HHMPIITPAYP MNSS
Sbjct: 280 MLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSS 339
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS ST VM+ +F + IC+ ++ KA W ALFEPY FFESYRNYL+++I A N DD
Sbjct: 340 YNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITARNEDD 399
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLR L L IER T L HP P +++D+S+P HC +FMGL +K
Sbjct: 400 LRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLWKKQISQA 458
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE +Q+DIR V EFK +I+ Y W+ GMEI VSH++RK IP +VFP G + +R R
Sbjct: 459 QEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVG 518
Query: 241 QQ 242
++
Sbjct: 519 KE 520
>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 748
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 137/242 (56%), Positives = 173/242 (71%), Gaps = 1/242 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML+SRFF+VY+ W+WPNPVMLC I+E LG VWDPR+N RD+ HHMPIITPAYP MNSS
Sbjct: 259 MLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS ST VM+ +F + IC+ ++ +A W ALFEPY FFESYRNYL+++I A N DD
Sbjct: 319 YNVSISTRHVMVQEFTRASDICQAIDEREADWDALFEPYPFFESYRNYLKIEITARNEDD 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLR L L IER T L HP P +++D+S+P HC +FMGL +K
Sbjct: 379 LRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLWKKQISQA 437
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE +Q+DIR V EFK +I+ Y W+ GMEI VSH++RK IP +VFP + +R R
Sbjct: 438 QEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGRIRPSRPSRTVG 497
Query: 241 QQ 242
++
Sbjct: 498 KE 499
>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/257 (59%), Positives = 188/257 (73%), Gaps = 7/257 (2%)
Query: 84 EVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDT 143
++ELNK QWSALFEPYLFFE+Y+NYLQVDIVAA+A DLLAWKGWVESRLRQLTL IERDT
Sbjct: 210 KIELNKEQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDT 269
Query: 144 YGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM 203
G LQCHPYP+EY+D SK CAHCAFFMGLQRK G QEGQQFDIRG+V+EF+ INMY+
Sbjct: 270 DGMLQCHPYPNEYIDPSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQDINMYL 329
Query: 204 FWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSG---LK 258
WKPGM+I VSH+RR+Q+P +VFP+GYKR+R R +QQ R+SE+ Q+GS +K
Sbjct: 330 PWKPGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHVNQQTNRTSEDVARSQSGSAERHVK 389
Query: 259 RKKDPESVDQD--GPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQE 316
RK D E D PEKR S SPQ+ S+SP A S + S+ E VI +
Sbjct: 390 RKNDCEMADLKPVKPEKRASTSPQRLQSVSPSSSAGRSGMTSLASSCEGVILGCSTIGDI 449
Query: 317 IAEGGDVSNSSVITSVT 333
++ DV+++S + S +
Sbjct: 450 VSNCEDVASNSEVRSTS 466
>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
Length = 745
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/320 (49%), Positives = 200/320 (62%), Gaps = 17/320 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML+SRFFRVY+ W+WPNPVMLC I+E LG VWDPR+N RD+ H MPIITPAYPCMNSS
Sbjct: 259 MLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPAYPCMNSS 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS ST VM+ +F IC+ ++ KA W ALFEPY FFESY+NYL+V+I A N DD
Sbjct: 319 YNVSVSTRYVMVQEFTQAFEICQAIDEGKADWDALFEPYPFFESYKNYLEVNITARNEDD 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLR L L IER ++ + HPYP ++ D S+P H +FMGL RK
Sbjct: 379 LRNWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPL-HIFYFMGLWRKQTTQA 437
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE +QFDIRG V EFK +I Y K GM+I VSH++RK+IP +VFP G + +R R
Sbjct: 438 QETEQFDIRGIVNEFKNTICAYQHRKEGMDIEVSHVKRKEIPLFVFPGGVRPSRTSRTTH 497
Query: 241 QQR----SSENGNEYQTGS--GLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 294
+ + + + Q G+ G+ D + V G +Q PD A
Sbjct: 498 KNSRAIPTRDVSADDQVGNLLGVASCSDAQHVPCKGSYMKQP---------EPD-FAGGF 547
Query: 295 VRSGTGSNVEPVIPDKRVLN 314
G+ S + P +P+K VLN
Sbjct: 548 QLPGSISLLPPSLPNKVVLN 567
>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 191/297 (64%), Gaps = 8/297 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML+SRFFRVY+ W+WPNPV LC I+E LG VWDPR+N RD+ H MPIITPAYPCMNSS
Sbjct: 257 MLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPAYPCMNSS 316
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVSTST VM+ +F G IC+ ++ N+A W LFEPY FFE Y+NYL+V I A + DD
Sbjct: 317 YNVSTSTRYVMIQEFTRGYEICQAIDENRATWDDLFEPYPFFELYKNYLEVGITARSEDD 376
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLR L L ER T+ L HP+P ++ D S+P H +FMGL RK
Sbjct: 377 LRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPL-HSFYFMGLWRKQTAQP 435
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE +QFDIRG V EFK ++ Y + GM+I VSH++RK IP +VFP G + R R A+
Sbjct: 436 QEAEQFDIRGIVNEFKSAVLAYAHRREGMDIEVSHVKRKDIPLFVFPGGVRPPRSSRTAA 495
Query: 241 QQRSSENGN----EYQTGS--GLKRKKDPES-VDQDGPEKRQSISPQKQDSLSPDHL 290
+ + + N + Q G+ G + DP+S +D G + + P +P L
Sbjct: 496 RSSRTVSRNVVTADGQVGNPLGAESWSDPQSALDHSGGYQSTLLVPSVSSKETPSIL 552
>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 760
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/250 (56%), Positives = 170/250 (68%), Gaps = 1/250 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML+SRFFRVY+ W+WPNPV LC I+E LG VWDPR+N RD+ H MPIITPAYPCMNSS
Sbjct: 278 MLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPAYPCMNSS 337
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS ST VM+ +F G IC+ ++ N+A W LFEPY FFE YRNYL+V I A N DD
Sbjct: 338 YNVSVSTRYVMVQEFTRGYEICQAIDENRATWDDLFEPYPFFELYRNYLEVVISARNEDD 397
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVESRLR L L ER T+ L HP+P ++ D S+P H +FMGL RK
Sbjct: 398 LRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPL-HSFYFMGLWRKQTVQP 456
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 240
QE +QFDIRG V EFK S+ Y GM+I VSH++RK IP +VFP G + R R A
Sbjct: 457 QEAEQFDIRGIVNEFKSSVCAYAHRGEGMDIEVSHVKRKDIPLFVFPGGVRPPRSSRTAG 516
Query: 241 QQRSSENGNE 250
+ + + N+
Sbjct: 517 RNGHAVSRND 526
>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
max]
Length = 702
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/270 (53%), Positives = 182/270 (67%), Gaps = 6/270 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRVYT W WPNPVMLCAI+E +G +WDPR+ D+ H MPIITPAY CMNSS
Sbjct: 260 MLVSRFFRVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYPNDRFHLMPIITPAYACMNSS 319
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS+ TL +M ++FQ GN ICE + W+ + + SY+NYLQ+DI NADD
Sbjct: 320 YNVSSITLCIMTEEFQRGNEICEYFAQDDLTWAFKLK-FPCSNSYKNYLQIDISGENADD 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L WKGWVES LRQL L IER YG LQCHP+P + D S+P HC+ FM LQRK G V
Sbjct: 379 LRKWKGWVESHLRQLRLQIERHIYGMLQCHPHPGDSSDKSRP-FHCSNFMALQRKQGVPV 437
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHP-RLA 239
+G QFDIR +VEEFK S+N+Y W PGM++ V H++ + IP +VFP G R HP ++
Sbjct: 438 NDGGQFDIRLTVEEFKHSVNIYTLWIPGMDVHVPHVKHRNIPTFVFP-GSVRPSHPSKVT 496
Query: 240 SQQRSSENGNEYQTGSG--LKRKKDPESVD 267
+ + S+ G G+ KRK+ +SVD
Sbjct: 497 WEIKKSQEGKMAVLGANDDRKRKQAEDSVD 526
>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
Length = 548
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 158/237 (66%), Gaps = 12/237 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAID-EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
MLVSRFF+V + W+WP PVMLC I+ + ELG VWD R+N RD+TH MP+ITPAYPCMN
Sbjct: 260 MLVSRFFKVLSQWKWPTPVMLCDIEHDDELGLPVWDGRRNPRDRTHLMPVITPAYPCMNC 319
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVD-IVAAN 117
+YNVS +T R++ +Q Q G+ C+E+ + W ALF+P+ FF ++++YLQVD VA
Sbjct: 320 TYNVSQATQRIIKEQIQAGHVACQEIAAGGDRGWGALFQPFPFFRTHKSYLQVDATVAGG 379
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA--FFMGLQR- 174
++L WKGWVESRLRQL +ERDT+G+L CH P Y D CA FF+GL +
Sbjct: 380 EEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAY-DAEPHGLRCASSFFVGLSKP 438
Query: 175 -----KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVF 226
+P + QFD+R + +EF + Y FW+PG+E+ V H+RRK +PPYV
Sbjct: 439 QQQRQQPSPPQGQQPQFDLRATADEFLQDVYTYRFWRPGLELAVKHVRRKDLPPYVM 495
>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 552
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 164/254 (64%), Gaps = 19/254 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
+LVSRFF+V W+WPNPV L I D+ +L VWDPR+N RD+TH MP++TPAYPCMN
Sbjct: 257 VLVSRFFKVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRNPRDRTHLMPVVTPAYPCMN 316
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
S YNVS +TLR + Q Q GN +C+++ + A W ALFEP+ FF+ Y++YL+VD+ A
Sbjct: 317 SCYNVSHATLRTITQQLQIGNAVCQKIVASGAGWGALFEPFHFFKEYKSYLRVDVKVAGG 376
Query: 119 ---DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC---AHCAFFMGL 172
DL WKGWVESRLRQL + +E T G L CHP P Y +KP +FF+GL
Sbjct: 377 GGEGDLREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAY--AAKPTDLQRTTSFFVGL 434
Query: 173 QRKPGEVVQEGQQ-----FDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV-- 225
+ + ++ QQ FD+R + EEFK + MY+ W+PGME+ VSH RRK +P YV
Sbjct: 435 SKPQPQPQEKEQQQPQVPFDLRETAEEFKRKVYMYVSWRPGMEVEVSHNRRKDLPSYVLE 494
Query: 226 --FPEGYKRTRHPR 237
P G+ + + P+
Sbjct: 495 QILPAGHLKRKRPQ 508
>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
Length = 556
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 157/241 (65%), Gaps = 15/241 (6%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFS--VWDPRKNRRDKTHHMPIITPAYPC 56
ML+ RFFRV+ W+WP+PVML AI D+ ELG S VWDPR+N RDK H MPI+TPAYPC
Sbjct: 257 MLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPC 316
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVEL---NKAQWSALFEPYLFFESYRNYLQVDI 113
MNS YNVS +TLRV+ +Q G+ +C+E+ W LF+P+ FF +Y++YLQVD+
Sbjct: 317 MNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVDV 376
Query: 114 VAANA--DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-----DTSKPCAHC 166
DDL WKGWVESRLR L+ +E DT G L CH +P Y + +
Sbjct: 377 TVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRRTS 436
Query: 167 AFFMGLQRKPGEVVQEGQQ-FDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
+FF+GL + P + Q+ Q FD+R + E FK + MY +W+PGME+ V+H+RRK +P YV
Sbjct: 437 SFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSYV 496
Query: 226 F 226
Sbjct: 497 L 497
>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
Length = 556
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 157/241 (65%), Gaps = 15/241 (6%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFS--VWDPRKNRRDKTHHMPIITPAYPC 56
ML+ RFFRV+ W+WP+PVML AI D+ ELG S VWDPR+N RDK H MPI+TPAYPC
Sbjct: 257 MLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPC 316
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVEL---NKAQWSALFEPYLFFESYRNYLQVDI 113
MNS YNVS +TLRV+ +Q G+ +C+E+ W LF+P+ FF +Y++YLQVD+
Sbjct: 317 MNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVDV 376
Query: 114 VAANA--DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-----DTSKPCAHC 166
DDL WKGWVESRLR L+ +E DT G L CH +P Y + +
Sbjct: 377 TVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRRTS 436
Query: 167 AFFMGLQRKPGEVVQEGQQ-FDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
+FF+GL + P + Q+ Q FD+R + E FK + MY +W+PGME+ V+H+RRK +P YV
Sbjct: 437 SFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSYV 496
Query: 226 F 226
Sbjct: 497 L 497
>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
Length = 556
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 157/241 (65%), Gaps = 15/241 (6%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAID--EAELGFS--VWDPRKNRRDKTHHMPIITPAYPC 56
ML+ RFFRV+ W+WP+PVML AI+ + ELG S VWDPR+N RDK H MPI+TPAYPC
Sbjct: 257 MLLPRFFRVFARWKWPSPVMLRAIEHNDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPC 316
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVEL---NKAQWSALFEPYLFFESYRNYLQVDI 113
MNS YNVS +TLRV+ +Q G+ +C+E+ W LF+P+ FF +Y++YLQVD+
Sbjct: 317 MNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVDV 376
Query: 114 VAANA--DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-----DTSKPCAHC 166
DDL WKGWVESRLR L+ +E DT G L CH +P Y + +
Sbjct: 377 TVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRRTS 436
Query: 167 AFFMGLQRKPGEVVQEGQQ-FDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
+FF+GL + P + Q+ Q FD+R + E FK + MY +W+PGME+ V+H+RRK +P YV
Sbjct: 437 SFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSYV 496
Query: 226 F 226
Sbjct: 497 L 497
>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
Length = 552
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/246 (47%), Positives = 160/246 (65%), Gaps = 13/246 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAID-EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
MLVSRFF+V++ WRWP PVMLC I+ + ELG VWD R+N D++H MP+ITPAYPCMN
Sbjct: 255 MLVSRFFKVFSHWRWPIPVMLCDIEHDDELGLPVWDVRRNLPDRSHLMPVITPAYPCMNC 314
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVD-IVAAN 117
+YNVS +T RV+ +Q Q G+ C+++ + W ALF+P FF ++++YLQVD VA
Sbjct: 315 TYNVSRATHRVIKEQIQAGDVACQKIAAGGGRDWGALFQPSPFFSTHKSYLQVDAAVAGG 374
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA---HCAFFMGL-- 172
A++L WKGWVESRLRQL +ERDT+G+L CH P Y ++P +FF+GL
Sbjct: 375 AEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAY--DAEPHGLRRASSFFVGLSK 432
Query: 173 ---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 229
Q KP FD+R +V EF+ + Y FW+PG+E+ V H+RR ++P YV +
Sbjct: 433 PQQQHKPHPPEGYPPFFDLRATVLEFQQDVYSYKFWRPGLELVVKHVRRNKLPAYVMQKI 492
Query: 230 YKRTRH 235
R H
Sbjct: 493 GGRNIH 498
>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/253 (45%), Positives = 150/253 (59%), Gaps = 53/253 (20%)
Query: 80 TICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMI 139
T +E+ELNKAQWSALFEPYLFFE+Y+NYLQVDIVAA+A DLLAWKGWVESRLRQLT
Sbjct: 27 TTTKEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLT--- 83
Query: 140 ERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 199
L+RK G QEGQQFDIR +V+EF+ I
Sbjct: 84 --------------------------------LKRKEGVTGQEGQQFDIRETVDEFRQDI 111
Query: 200 NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSG- 256
NMY+ WK GM+I VSH+RR+Q+P +VFP+GYKR+R R +QQ R+SE+ Q+GS
Sbjct: 112 NMYLPWKAGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHMNQQTNRTSEDVARSQSGSAE 171
Query: 257 --LKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLN 314
+KRK D E + + P S+SP A S + S+ E VI + +
Sbjct: 172 RHVKRKNDCEMAN---------LKP----SVSPSSSAGRSGVTSLASSCEGVILGRPTIG 218
Query: 315 QEIAEGGDVSNSS 327
++ DV+++S
Sbjct: 219 DIVSNCEDVASNS 231
>gi|110740407|dbj|BAF02098.1| poly(A) polymerase like protein [Arabidopsis thaliana]
Length = 348
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 121/170 (71%), Gaps = 8/170 (4%)
Query: 130 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIR 189
SR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G QE QQFDIR
Sbjct: 1 SRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIR 60
Query: 190 GSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS--QQRSSEN 247
G+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R + +S E+
Sbjct: 61 GTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKSGED 120
Query: 248 GNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 291
G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++ A
Sbjct: 121 GSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSA 170
>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
Length = 565
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 169/291 (58%), Gaps = 16/291 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WP PV+L LGF+VWDPR N +D+ H MPIITPAYP NS++
Sbjct: 277 LVHKFFLVFSQWKWPQPVLLKQPSNVNLGFAVWDPRVNIQDRYHLMPIITPAYPQQNSTF 336
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +++M++F+ G + +++ L+K W LFEP LFF Y++++ + + A + +D
Sbjct: 337 NVSGSTRQIIMEEFKLGLQLTDDIMLSKQTWDKLFEPPLFFMKYKHFIVLLVSAESPEDH 396
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVDTSKPC-AHCA-FFMGLQRKPGE 178
L W G VES+ R L +ER+ + L +P +++ + HC+ +F+GL+ E
Sbjct: 397 LEWCGLVESKFRLLIGTLERNQHITLAHINPESFSLLESQRESNTHCSMWFIGLEFAKSE 456
Query: 179 VVQEGQQFDIRG---SVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRH 235
+ FDI+ +V+ L+I+M K GM++ H++RKQ+ Y+ P KR R
Sbjct: 457 NLNVNLTFDIQQFTETVQNHALNISML---KEGMKLEARHVKRKQLYQYLSPSLLKRERK 513
Query: 236 PRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLS 286
+ + +S NG + + KR DP + D D P K+ +S + ++S
Sbjct: 514 TSITVKSQS--NGTDSK-----KRLSDPGNSDSDNPNKKIRLSEEMHSTVS 557
>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 656
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 141/251 (56%), Gaps = 15/251 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLV FF+++ W+W PVML AI + G VWD R N+ ++ M IITPAYP NS+
Sbjct: 242 MLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKAERFQLMKIITPAYPAQNST 301
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+NV+ STL V+ +F+ G C ++ + + +W +L+EP FF +++YLQV + A DD
Sbjct: 302 FNVTHSTLHVLKREFKRGRETCAKILMGQTKWESLWEPLPFFTMHKHYLQVTMCAITEDD 361
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA-HCAFFMGLQRKPGEV 179
W+GWV SRLR L +E + G L HPYP D +K A HC +++GL P
Sbjct: 362 FKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPAKDSALHCIYYIGLGPAPPPT 421
Query: 180 VQEGQQ---FDIRGSVEEFKLSINMYMF-------WKPGMEICVSHIRRKQIPPYVFP-- 227
++ +VE+F++ + ++ W+PGME+ V H++RK +P + P
Sbjct: 422 TGGPAPRGTLNLNPAVEQFQMLVTSWVNRADGTVQWQPGMEVHVKHMKRKDVPAWAIPDS 481
Query: 228 --EGYKRTRHP 236
EG + R P
Sbjct: 482 GKEGKEEARTP 492
>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
Length = 780
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 144/251 (57%), Gaps = 23/251 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WP PV+L D LGF VWDPR N +D+ H MPIITPAYP NS++
Sbjct: 336 LVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTF 395
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS+ST +VM+++F G I +E+ L+KA W LFE FF YR+++ + + + NADD
Sbjct: 396 NVSSSTRKVMLNEFNRGMQITDEIMLSKAGWDKLFEAPSFFFKYRHFIVLLVTSNNADDH 455
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYP-----HEY--------VDTSKPCAHCAF 168
L W G VES++R L L +ER+ + L H P HE D S+ C+
Sbjct: 456 LEWCGLVESKIRYLILNLERNQHINL-AHVNPKCFEQHEQNQTERQRESDGSRASTLCSL 514
Query: 169 -FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEICVSHIRRKQIPP 223
F+GL+ + E D+ S++ F S++ + K GM+I H+RRKQ+
Sbjct: 515 WFIGLEFERS----ENLNVDLTESIQSFTDSVHKHAVHIKLLKDGMKIEARHVRRKQLSQ 570
Query: 224 YVFPEGYKRTR 234
Y+ P KR R
Sbjct: 571 YLDPNLLKRER 581
>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
Length = 834
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 146/254 (57%), Gaps = 7/254 (2%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST +M ++F+YG ++ +E+ KA+W LFEP FF+ Y++Y+ + A+ ++
Sbjct: 328 NVSTSTRTIMSEEFKYGLSVTDEILQGKAEWPKLFEPPSFFQKYKHYIVLTASASTEENH 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-QCHP--YPHEYVDTSKPCAHCAFFMGLQRKP-- 176
L W G VES++R L +ER+ Y L +P +P + S+ C +F+G+ K
Sbjct: 388 LEWVGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRSENDFVCMWFIGIIFKKVE 447
Query: 177 -GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRH 235
E V +DI+ + N K GM+I +H+++KQ+ Y+ PE +R +
Sbjct: 448 NAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHQYLPPELVQRKKR 507
Query: 236 PRLASQQRSSENGN 249
+A R S GN
Sbjct: 508 -SIAEVNRGSNGGN 520
>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
Length = 685
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 159/301 (52%), Gaps = 21/301 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST +M ++F+YG ++ +E+ KA+WS LFEP FF+ Y++Y+ + A+ ++
Sbjct: 329 NVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHFFQKYKHYIVLTASASTEENH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKP- 176
L W G VES++R L +ER+ Y L H P + + + F F+G+ K
Sbjct: 389 LEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENRNENEFVSMWFIGIIFKKV 447
Query: 177 --GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
E V +DI+ + N K GM+I +H+++KQ+ Y+ PE ++ +
Sbjct: 448 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHVKKKQLNLYLPPELVQKKK 507
Query: 235 HPRLASQQRSSENGNEYQ-------------TGSGLKRKKDPESVDQDGPEKRQSISPQK 281
+A RSS G+ + T +G P V + + S+SP K
Sbjct: 508 RQSIADLNRSSNGGSSKRISLDSSHLDSSRDTDTGTPFSSPPCKVSKPASDTEDSVSPPK 567
Query: 282 Q 282
+
Sbjct: 568 K 568
>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
Length = 609
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 137/250 (54%), Gaps = 3/250 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V++ W+WP PV+L D LG+ VWDPR N D+ H MPIITPAYP NS++
Sbjct: 271 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTF 330
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M + F+ G +I EE+ + KA W LFEP FF Y++Y+ + ++ A+D
Sbjct: 331 NVSVSTRTIMQEAFENGLSITEEIIMGKANWDKLFEPPNFFSKYKHYIVLLARSSTAEDQ 390
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-FFMGLQRKPGEV 179
L W G VES++R L +ER+ + L H P + +P HC+ +F+GL E
Sbjct: 391 LEWCGLVESKIRHLIGTLERNPHINL-AHVNPEAFPPLDPEPDKHCSMWFIGLLFAKSEN 449
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA 239
+ +DI+ VE + K GM I H++RK + YV P K+ R
Sbjct: 450 LNIDLTYDIKSFVETIERQAEQINMLKEGMWIEAKHVKRKDLHTYVSPSLLKKERKVSGG 509
Query: 240 SQQRSSENGN 249
+ S GN
Sbjct: 510 VHRNGSIAGN 519
>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
Length = 1653
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 141/251 (56%), Gaps = 23/251 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WP PV+L D LGF VWDPR N +D+ H MPIITPAYP NS++
Sbjct: 330 LVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTF 389
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS+ST +VM+ +F G I +++ + K W LFE FF YR+++ + + ++NADD
Sbjct: 390 NVSSSTRKVMLMEFNRGMQITDDIMMGKQMWDKLFEAPSFFYRYRHFIVLLVTSSNADDH 449
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----------------VDTSK-PCA 164
L W G VES++R L +ER+ + L H P Y D ++ P A
Sbjct: 450 LEWCGLVESKIRYLIQNLERNQHINL-AHVNPKCYEQHEQNPAATLNAGGGADANQTPAA 508
Query: 165 HCAF-FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 223
C+ F+GL+ + E D+ S++ F S++ + K GM+I H+RRKQ+
Sbjct: 509 FCSLWFIGLEFE----RTENLNVDLTESIQSFTDSVHKHALLKDGMKIEARHVRRKQLAS 564
Query: 224 YVFPEGYKRTR 234
Y+ KR R
Sbjct: 565 YLDANLLKRER 575
>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
Length = 616
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 133/235 (56%), Gaps = 3/235 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V++ W+WP PV+L D LGF VWDPR N D+ H MPIITPAYP NS++
Sbjct: 275 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTF 334
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M + F+ G +I EE+ + KA W LFEP FF Y++Y+ + + +A+D
Sbjct: 335 NVSVSTRTIMQEAFETGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLSAEDQ 394
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-FFMGLQRKPGEV 179
L W G VES++R L +ER+ + L H P + +P HC+ +F+GL E
Sbjct: 395 LEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPEGHCSMWFIGLLFAKSEN 453
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ +DI+ V+ + K GM I H++RK + YV P +R R
Sbjct: 454 LNVDLTYDIKSFVDSIQRQAEQLSVLKEGMWIEAKHVKRKDLHTYVSPSLLRRER 508
>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
Length = 619
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 150/285 (52%), Gaps = 11/285 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V++ W+WP PV+L D LGF VWDPR N D+ H MPIITPAYP NS++
Sbjct: 276 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTF 335
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M + F+ G +I EE+ + KA W LFEP FF Y++Y+ + + A+D
Sbjct: 336 NVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLTAEDQ 395
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-FFMGLQRKPGEV 179
L W G VES++R L +ER+ + L H P + +P HC+ +F+GL E
Sbjct: 396 LEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHCSMWFIGLLFAKSEN 454
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA 239
+ +DI+ V+ K GM I V H++++ + YV P KR R
Sbjct: 455 LNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPSLLKRERKVSGT 514
Query: 240 SQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDS 284
+ + GN SG ++P + R+ +S Q QD+
Sbjct: 515 VHKNGNIAGN---GNSGSVSPRNPGNTTN-----RKRLSDQNQDT 551
>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
Length = 619
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 150/285 (52%), Gaps = 11/285 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V++ W+WP PV+L D LGF VWDPR N D+ H MPIITPAYP NS++
Sbjct: 276 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTF 335
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M + F+ G +I EE+ + KA W LFEP FF Y++Y+ + + A+D
Sbjct: 336 NVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLTAEDQ 395
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-FFMGLQRKPGEV 179
L W G VES++R L +ER+ + L H P + +P HC+ +F+GL E
Sbjct: 396 LEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHCSMWFIGLLFAKSEN 454
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA 239
+ +DI+ V+ K GM I V H++++ + YV P KR R
Sbjct: 455 LNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPSLLKRERKVSGT 514
Query: 240 SQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDS 284
+ + GN SG ++P + R+ +S Q QD+
Sbjct: 515 VHKNGNIAGN---GNSGSVSPRNPGNTTN-----RKRLSDQNQDA 551
>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 598
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 158/297 (53%), Gaps = 16/297 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
MLV FF++++ W+W PVML I DE G VWD R N+ ++ M I+TPAYP NS
Sbjct: 275 MLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILTPAYPAQNS 334
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
++NVS STL V+ +F+ G + + + LN A+W L+ F E Y++YL V I A N D
Sbjct: 335 TFNVSVSTLEVLKAEFKRGKEVTKMILLNTAKWEQLWCSLNFLEKYKHYLMVTISAKNED 394
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK-PCAHCAFFMGLQRKPGE 178
D W+GWV SR++ L IE T G++ HP Y D K +H F+GL +
Sbjct: 395 DFKKWEGWVGSRIKLLIQGIENATGGQMLAHPGTSRYKDPEKDENSHVTLFLGLFPSSLK 454
Query: 179 VVQEGQQFDIRGSVEEFKLSINMYM-------FWKPGMEICVSHIRRKQIPPYVFPE--G 229
+E ++ +VE+F++++ +M W PGM+ V +++RK +P +V E G
Sbjct: 455 KKEEKVSLNLNPAVEQFQMTVTSWMDRATGESNWVPGMQANVKYLKRKDLPSFVKEEIDG 514
Query: 230 YKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLS 286
Y + + ++ +S E + + K P D KR+ + Q+ DS++
Sbjct: 515 YVKDIYAPEKEKKAASAEDEEKKIS---EEKPLPLGDDTKAARKRKEM--QEDDSIT 566
>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 144/249 (57%), Gaps = 20/249 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WP PV+L D LGF VWDPR N +D+ H MPIITPAYP NS++
Sbjct: 270 LVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTF 329
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS+ST +VM+ +F G I +++ + K W LFE FF YR+++ + + ++NADD
Sbjct: 330 NVSSSTRKVMLMEFNRGMQITDDIMMGKQMWEKLFEAPSFFYRYRHFIVLLVTSSNADDH 389
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS------KPCAHCA-FF 169
L W G VES++R L +ER+ + L +C+ + T+ KP C+ +F
Sbjct: 390 LEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNSATTLNGADGKPTPFCSLWF 449
Query: 170 MGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEICVSHIRRKQIPPYV 225
+GL+ + E + D+ S++ F S++ + K GM+I H+RRKQ+ Y+
Sbjct: 450 IGLEFERSENL----NVDLTESIQSFTDSVHKHAVHIKLLKDGMKIEARHVRRKQLTQYL 505
Query: 226 FPEGYKRTR 234
P KR R
Sbjct: 506 DPNLLKRER 514
>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
Length = 610
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 153/299 (51%), Gaps = 11/299 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V++ W+WP PV+L D LG+ VWDPR N D+ H MPIITPAYP NS++
Sbjct: 272 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTF 331
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M + F+ G +I EE+ + KA W LFEP FF Y++Y+ + + A+D
Sbjct: 332 NVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLTAEDQ 391
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-FFMGLQRKPGEV 179
L W G VES++R L +ER+ + L H P + +P HC+ +F+GL E
Sbjct: 392 LEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGHCSMWFIGLLFAKSEN 450
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA 239
+ +DI+ V+ K GM I H++RK + YV P KR R
Sbjct: 451 LNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTYVSPSLLKRERKISGN 510
Query: 240 SQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSG 298
+ + GN TGS R +Q R+ +S Q D+ A + ++G
Sbjct: 511 VHKNGNIAGNG-NTGSVSPR-------NQGDLTNRKRLSDQSTDTYGKKRRATDNEQAG 561
>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
Length = 343
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 137/241 (56%), Gaps = 19/241 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
L+SRFFR+Y MW WPNP+ML +D LGFS W+P+ N RD++H MPIITPAYP +NSS
Sbjct: 85 LLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKINVRDRSHLMPIITPAYPALNSS 144
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNV STL ++ +F G E+E K+ W+ LF +FF+ +++L+V I A NA+D
Sbjct: 145 YNVMASTLHILKAEFGKGFNRTLEIETKKSSWAKLFIAPVFFQRSKHFLRVQITANNAED 204
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD-----------TSKPCAHCAF- 168
W GWVESRLR L L +E +L+ HP+ + D +SK H ++
Sbjct: 205 FDGWFGWVESRLRHLFLRLE--ALPELRIHPFA-RFFDFGETKGATPEGSSKREVHTSWL 261
Query: 169 FMGLQR-KPGEVVQEG--QQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
F+GL P V G D+ + +F + + GM++ + H+ R QIP +V
Sbjct: 262 FIGLGFPAPNPVAATGGTHDVDLTSVIRDFAFYTDQWEARHGGMDMQIDHVTRSQIPEWV 321
Query: 226 F 226
Sbjct: 322 L 322
>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
Length = 603
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 132/235 (56%), Gaps = 3/235 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V++ W+WP PV+L D LG+ VWDPR N D+ H MPIITPAYP NS++
Sbjct: 275 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITPAYPQQNSTF 334
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M + F+ G I EE+ + KA W LFEP FF Y++Y+ + +++A+D
Sbjct: 335 NVSVSTRTIMQEAFENGLAITEEIIIGKATWDKLFEPPNFFGKYKHYIVLLARSSSAEDQ 394
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-FFMGLQRKPGEV 179
L W G VES++R L +ER+ + L H P + +P HC+ +F+GL E
Sbjct: 395 LEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLDPEPGKHCSMWFIGLSFAKSES 453
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ +DI+ VE + K GM I H++RK + YV KR R
Sbjct: 454 LNIDLTYDIKSFVETIERQAEQISMLKEGMWIEAKHVKRKDLHTYVSSSLVKRER 508
>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 661
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 156/288 (54%), Gaps = 28/288 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WP PV+L D LGF VWDPR N +D+ H MPIITPAYP NS++
Sbjct: 280 LVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTF 339
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS+ST +VM+++F G I +E+ L KA W LFE FF YR+++ + + + NADD
Sbjct: 340 NVSSSTRKVMLNEFNRGMQITDEIMLGKAGWDKLFEAPSFFFKYRHFIVLLVTSNNADDH 399
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-----------DTSKPCAHCAFFM 170
L W G VES++R L +ER+ + L H P + + K +F+
Sbjct: 400 LEWCGLVESKIRYLIQNLERNLHINL-AHVNPKCFEQQEQNQKDDGGEGGKTTLCSLWFI 458
Query: 171 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEICVSHIRRKQIPPYVF 226
GL+ + E + D+ S++ F +++ + K GM+I H+RRKQ+ Y+
Sbjct: 459 GLEFERSENL----NVDLTESIQNFTDAVHKHAVHIKVLKDGMKIEARHVRRKQLNQYLD 514
Query: 227 PEGYKRTRH--------PRLASQQRSSENGNEYQTGSGLKRKKDPESV 266
P KR R L + ++ N +G+ L++++ E++
Sbjct: 515 PNLLKRERKNSDSGLGSTALNTSGGAAAGNNTSGSGTTLRKRQSSEAL 562
>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
Length = 617
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 131/235 (55%), Gaps = 3/235 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V++ W+WP PV+L D LG+ VWDPR N D+ H MPIITPAYP NS++
Sbjct: 276 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTF 335
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M + F+ G +I EE+ + KA W LFEP FF Y++Y+ + + A+D
Sbjct: 336 NVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLTAEDQ 395
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-FFMGLQRKPGEV 179
L W G VES++R L +ER+ + L H P + +P HC+ +F+GL E
Sbjct: 396 LEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGHCSMWFIGLLFAKSEN 454
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ +DI+ V+ K GM I H++RK + YV P KR R
Sbjct: 455 LNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTYVSPSLLKRER 509
>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
Length = 809
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 140/253 (55%), Gaps = 16/253 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++ RFF+VY +W+WP P++LC I E LG VW+P+ RDK H MPIITPAYP MNS+
Sbjct: 302 IIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPK---RDKAHLMPIITPAYPSMNST 358
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STL++M +F G I ++E + W L E FF Y Y+++D + N +D
Sbjct: 359 YNVSKSTLQLMKSEFVRGAEITRKIETGECTWKNLLEKCDFFTRYSFYIEIDCYSMNEED 418
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD----TSKPCAHC-AFFMGLQRK 175
W+GW+ES+LR L +E K PYP + + + P C +FFMGL
Sbjct: 419 SRKWEGWIESKLRFLISNLESTPKMKFAV-PYPKGFTNNLHKANNPDQICTSFFMGLSFN 477
Query: 176 PGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRKQIPPYVFPEGYKR 232
+ D+ +V EF I ++ +P M+I V +I++KQ+P +V EG
Sbjct: 478 FSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQLPAFVKDEG--- 534
Query: 233 TRHPRLASQQRSS 245
P +++RSS
Sbjct: 535 PEEPVKTTKKRSS 547
>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
Length = 592
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 151/292 (51%), Gaps = 21/292 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V++ W+WP PV+L D LG+ VWDPR N D+ H MPIITPAYP NS++
Sbjct: 263 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITPAYPQQNSTF 322
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M + F+ G I EE+ + KA W LFEP FF Y++Y+ + + A+D
Sbjct: 323 NVSISTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLAKSLTAEDQ 382
Query: 122 LAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDTSKPCAHCAFFMGL------ 172
L W G VES++R L M+ER+ T + +P ++ K C+ +F+GL
Sbjct: 383 LEWCGLVESKIRHLIGMLERNPHITLAHVNPEAFPPLNPESGKHCS--MWFIGLSFSKCE 440
Query: 173 ---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 229
+ + GE + +DI+ V+ + +K GM I H++RK + YV P
Sbjct: 441 KSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAKHVKRKDLNTYVSPSL 500
Query: 230 YKRTRHPRLASQQRSSENGN-------EYQTGSGLKRKKDPESVDQDGPEKR 274
KR R + + GN G K++ +++D G ++R
Sbjct: 501 LKRERKVSSGVHRNGNIAGNGNSGSVSPRNQGDTSKKRLSDQTLDACGKKRR 552
>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
Length = 861
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 145/255 (56%), Gaps = 9/255 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST +M ++F+YG ++ +E+ KA+WS LFEP FF+ Y++Y+ + A+ ++
Sbjct: 326 NVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHFFQKYKHYIVLAASASTEENH 385
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKP- 176
L W G VES++R L +ER+ Y L H P + + + F F+G+ K
Sbjct: 386 LEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENRNENDFVSMWFIGIIFKKM 444
Query: 177 --GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
E V +DI+ + N K GM+I +H+++KQ+ Y+ PE ++ +
Sbjct: 445 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHVKKKQLNLYLPPELVQKKK 504
Query: 235 HPRLASQQRSSENGN 249
+A RSS G+
Sbjct: 505 R-SIADLNRSSNGGS 518
>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
Length = 343
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 136/240 (56%), Gaps = 17/240 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
L+SRFFR+Y MW WPNP+ML +D LGFS W+P+ N RD++H MPIITPAYP +NSS
Sbjct: 85 LLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKINVRDRSHLMPIITPAYPALNSS 144
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNV STL V+ +F G E+E K W+ LF FF+ +++L+V+I A +A D
Sbjct: 145 YNVMASTLCVLKTEFDRGLDRTLEIETKKFSWAKLFVAPAFFQRSKHFLRVEITARSAQD 204
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--EYVDT--------SKPCAHCAF-F 169
W GWVESRLR L L +E ++ HP+ +++DT SK H ++ F
Sbjct: 205 FDGWFGWVESRLRHLFLRLE--ALSDIRIHPFARFFDFIDTKDTRPESSSKCEVHTSWLF 262
Query: 170 MGLQR---KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVF 226
+GL+ K V D+ + +F + + GM++ + H+ R QIP +V
Sbjct: 263 IGLKFPAPKAAPVTGATHSVDLTSVIRDFATYTDQWEGRHGGMDMQIDHVTRSQIPEWVL 322
>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
Length = 632
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 136/246 (55%), Gaps = 15/246 (6%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRKNRRDKTHHMPIITPAYPC 56
MLV FF+++ W W PVML ++D A G WD R N+ ++ M IITPAYP
Sbjct: 265 MLVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRHWDERVNKPERYQLMKIITPAYPA 324
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NVS+STL V+ +F+ G + +V + +A+W+ ++ FF Y+ YLQ+ + A
Sbjct: 325 QNSTFNVSSSTLEVLKREFKRGKIVTGKVLIGEAKWTDVWSDVQFFAKYKTYLQLIVTAD 384
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC-AHCAFFMGLQRK 175
N +D W+GWV SRL+ L +E + G + HP ++ D K HC F GL
Sbjct: 385 NEEDFKKWEGWVGSRLKNLVQGVETFSEGAMMAHPGVKKFYDPEKDKEVHCNVFFGLFPN 444
Query: 176 PGEV---VQEGQQFDIRGSVEEFKLSINMYM-------FWKPGMEICVSHIRRKQIPPYV 225
P +E ++ ++ ++E F++++ Y+ WKPGM + + +R+K IP +
Sbjct: 445 PSTTSGDAREKKKINLNPAIENFQMTVGNYIDRATGSVNWKPGMGVQIKLLRKKDIPSWA 504
Query: 226 FPEGYK 231
PEG K
Sbjct: 505 LPEGGK 510
>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
Length = 606
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 175/350 (50%), Gaps = 30/350 (8%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
MLV FF++++ W+W PVML I DE G VWD R N+ ++ M I+TPAYP NS
Sbjct: 269 MLVYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILTPAYPAQNS 328
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
++NVS STL V+ +F+ G + + + LNK +W L+ F Y++YL V I A A+
Sbjct: 329 TFNVSVSTLEVLKAEFRRGKEVTKNILLNKCKWEDLWIKTSFLTMYKHYLMVSISAKTAE 388
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK-PCAHCAFFMGLQRKPGE 178
D W+GWV SR++ L IE T G++ HP Y D K H F+GL P
Sbjct: 389 DFKKWEGWVGSRVKLLIQGIENCTGGQMLAHPGTARYKDPEKEENTHVILFLGLF--PSS 446
Query: 179 V-VQEGQQFDIRGSVEEFKLSINMYM-------FWKPGMEICVSHIRRKQIPPYVFPE-- 228
+ +E ++ +VE+F++ + +M W PGM+ V H++RK +P +V E
Sbjct: 447 LKKKEKVAMNLNPAVEQFQMQVTSWMDRATGESNWVPGMQAMVRHVKRKDLPGFVREEID 506
Query: 229 GYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPD 288
GY + + + +E + K++KD S D++ + P+ + + + D
Sbjct: 507 GYVKDVY-----------DESEVSAEAASKKRKDGGSEDENNIADDE--EPKAKKAATED 553
Query: 289 HLAPSSVRSGTGSNVE--PVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV 336
AP+ +R+ V ++ + N+ A GG + + S V
Sbjct: 554 K-APTKIRADDHDEVAGLAMLAHDELENKSTAVGGKSGGAGIKVSFAQVV 602
>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
Length = 632
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 136/227 (59%), Gaps = 12/227 (5%)
Query: 8 RVYTMWRWPNPVMLCAID-EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTS 66
+VY+ W WP P+ML AI+ + L VWDPR+N RD+TH MPIITPAYPCMNSSYNVS
Sbjct: 267 QVYSQWAWPTPIMLRAIERDPSLAMPVWDPRENPRDRTHLMPIITPAYPCMNSSYNVSEC 326
Query: 67 TLRVMMDQFQYGNTICEEVELNKA----QWSALFEPYLFFESYRNYLQVDIVAANADDLL 122
TL VM ++F+ G+ +C + + W+ L EP FFE ++++LQV+++A++ +D
Sbjct: 327 TLAVMAEEFRRGDEVCGRIMTHNGSGLTDWAQLLEPLPFFEGFKHFLQVEVMASSQEDFE 386
Query: 123 AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGLQRKPGE 178
W+GWV SR+R L + ++ + Q V + P A C +FMGL +K
Sbjct: 387 VWEGWVHSRMRLLIKVDQQQQQQQQQQDGGGGGSV--ADPPAQQQPRCFYFMGLSKKKAM 444
Query: 179 VVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
++ + + D+ V EF + + + GM+I V H+ ++Q+P +V
Sbjct: 445 IIPQS-KVDLTQPVNEFAHKVKEFEQRREGMDISVRHLLQRQLPEWV 490
>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
Length = 803
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 140/246 (56%), Gaps = 8/246 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++RFF++Y W+WP+P++LC I D +L VW+ +RDK+H MPI+TPAYP MNS+
Sbjct: 359 IINRFFKIYDGWKWPSPILLCQIQDGGQLAAKVWN---QKRDKSHLMPILTPAYPSMNST 415
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS STL ++ +F G I ++++ + +W+ L E FF YR YLQ+D+ A D
Sbjct: 416 YNVSRSTLSLLKSEFSRGAEITKKIDSGERKWTDLVEKGDFFTRYRFYLQIDVSAPEEDT 475
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC--AHCA-FFMGLQRKPG 177
W+GW+ES+LR L +E+ K PY + + + C FFMGLQ
Sbjct: 476 HRKWEGWIESKLRILISNLEQTPNMKFAI-PYAKSFANKASAVNGGICTCFFMGLQFNFS 534
Query: 178 EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPR 237
+ + D+ G+V F I + P +E+ + +I++K +P +V EG + +
Sbjct: 535 TAIGADKNVDLTGAVTSFTNLIKDWPGKLPTIEMKIHYIKKKNLPVFVKDEGPEHPPKQK 594
Query: 238 LASQQR 243
A+++R
Sbjct: 595 TAAKKR 600
>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 171/326 (52%), Gaps = 20/326 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST +M ++F+ G T+ +E+ KA WS LFEP FF+ Y++Y+ + A+ ++
Sbjct: 329 NVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNFFQKYKHYIVLTASASTEENH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKP- 176
L W G VES++R L +ER+ Y L H P + + + F F+G+ K
Sbjct: 389 LEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENHNENEFVSMWFIGISFKKL 447
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
+ V +DI+ + ++ + N+ M K GM I +H+++KQ+ Y+ PE +R
Sbjct: 448 DNSDCVNIDLTYDIQSFTDTVYRQASNINML-KDGMTIEATHVKKKQLHHYLPPELVQRK 506
Query: 234 RHPRLASQQRSSENGNEYQ---TGSGLKRKKD-----PESVDQDGPEKRQSISPQKQDSL 285
+ L RSS G + GS L +D P S + Q S + S+
Sbjct: 507 KK-SLGDINRSSNGGGSKRCSLDGSQLDSSRDTDIGTPFSSPTPVSKPSQPASTPEDSSI 565
Query: 286 S-PDHLAPSSVRSGTGSNVEPVIPDK 310
S P H + + S S V P P++
Sbjct: 566 SPPKHPVLAFMDSPPASEVSPPKPEQ 591
>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
Length = 553
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 139/248 (56%), Gaps = 20/248 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V++ W+WP PV+L D LG+ VWDPR N D+ H MPIITPAYP NS++
Sbjct: 273 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVADRYHLMPIITPAYPQQNSTF 332
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M + F+ G I EE+ + KA W LFEP FF Y++Y+ + + +A+D
Sbjct: 333 NVSVSTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLAKSLSAEDQ 392
Query: 122 LAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDTSKPCAHCAFFMGL------ 172
L W G VES++R L M+ER+ T + +P ++ K C+ +F+GL
Sbjct: 393 LEWCGLVESKIRHLIGMLERNPHITLAHVNPEAFPPLNPESGKHCS--MWFIGLAFSKCE 450
Query: 173 ---QRKPGEVVQEGQQFDIRG---SVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVF 226
+ + GE + +DI+ +VE INM+ K GM I H++RK + YV
Sbjct: 451 KSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMF---KEGMWIEAKHVKRKDLHTYVS 507
Query: 227 PEGYKRTR 234
P K+ R
Sbjct: 508 PSLLKKER 515
>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
Length = 504
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 132/260 (50%), Gaps = 38/260 (14%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V RFF+V+ W WP P+ML I+ +G VWDPR N RD H MPIITPAYP NSS
Sbjct: 249 VIVDRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINPRDSMHLMPIITPAYPAANSS 308
Query: 61 YNVSTSTLRVM------------MDQFQYGNTICEEV--ELNKAQWSALFEPYLFFESYR 106
YNVS STL M ++F++G +C + E +W L EP FF +YR
Sbjct: 309 YNVSESTLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAEGGLTKWHKLLEPVPFFRNYR 368
Query: 107 NYLQVDIVAANADDLL-------------AWKGWVESRLRQLTLMIERDTYGKLQCHPYP 153
NYLQ + + + AW GWV SRLRQL + +E + P+P
Sbjct: 369 NYLQARLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLRQLVMRVE----PFVTVRPWP 424
Query: 154 HEYVDTSKPCA-----HCAFFMGLQRKPGEVVQEGQ--QFDIRGSVEEFKLSINMYMFWK 206
P A C +FMGL++KP G+ ++ V+EFK + Y+ WK
Sbjct: 425 KAIFPPRGPEAAGQPRRCFYFMGLKKKPLPSQPGGRASSVNLNNPVQEFKNQVMGYLSWK 484
Query: 207 PGMEICVSHIRRKQIPPYVF 226
GM + ++H +K +P +V
Sbjct: 485 EGMHVLITHQMQKALPSFVL 504
>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
Length = 744
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 145/255 (56%), Gaps = 11/255 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST +M ++F+ G T+ +E+ KA WS LFEP FF+ YR+Y+ + A+ ++
Sbjct: 329 NVSTSTRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNFFQQYRHYIVLTASASTEENH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKP- 176
L W G VES++R L +ER+ Y L H P + + + F F+G+ K
Sbjct: 389 LEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENRNENDFVSMWFIGISFKKL 447
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
+ V +DI+ + ++ + N+ M K GM I +H+++KQ+ Y+ PE +R
Sbjct: 448 DNSDCVNIDLTYDIQSFTDTVYRQASNINML-KDGMTIEATHVKKKQLHHYLPPELVQRK 506
Query: 234 RHPRLASQQRSSENG 248
+ L RSS G
Sbjct: 507 KK-SLGDINRSSNGG 520
>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
Length = 647
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 142/241 (58%), Gaps = 23/241 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAE------LGFSVWDPRKNRRDKTHHMPIITPAYP 55
+++RFF VY W+W NPV+LC I E +GF VW+P N +D+ H MPIITPA+P
Sbjct: 272 IINRFFYVYKAWQWKNPVILCEIKEVPKNSPGLMGFRVWNPNTNPQDRAHLMPIITPAFP 331
Query: 56 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVA 115
MNS++NV+ +TLRV+ ++ Q G+ + +E+E +AQWS L+ PY+FFE++++++QV ++A
Sbjct: 332 SMNSTHNVTQTTLRVITEELQRGSELVKEIENERAQWSDLWSPYMFFENHKHFIQVKMLA 391
Query: 116 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--EYVDTSK---PCAHCAFFM 170
+ W GW+ES++R L +E T+ LQ P+P + D K A C ++
Sbjct: 392 NSEQAFQKWTGWIESKIRFLVRKLE--TFKGLQVRPWPKVIQESDNQKDGFQFAQC-MYI 448
Query: 171 GLQ------RKPGEVVQEGQQFDIRGSVEEFK---LSINMYMFWKPGMEICVSHIRRKQI 221
GL G+ D+RG++ +F ++ N +K +++ V H+R K +
Sbjct: 449 GLVLCTTSGNNNGKSTGITPVVDLRGAILDFVGFIMNWNEVEIYKDSIDLKVKHLRFKDL 508
Query: 222 P 222
P
Sbjct: 509 P 509
>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 171/326 (52%), Gaps = 20/326 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST +M ++F+ G T+ +E+ KA WS LFEP FF+ Y++Y+ + A+ ++
Sbjct: 329 NVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNFFQKYKHYIVLTASASTEENH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKP- 176
L W G VES++R L +ER+ Y L H P + + + F F+G+ K
Sbjct: 389 LEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENHNENEFVSMWFIGISFKKL 447
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
+ V +DI+ + ++ + N+ M K GM I +H+++KQ+ Y+ E +R
Sbjct: 448 DNSDCVNIDLTYDIQSFTDTVYRQASNINML-KDGMTIEATHVKKKQLHHYLPSELVQRK 506
Query: 234 RHPRLASQQRSSENGNEYQT---GSGLKRKKD-----PESVDQDGPEKRQSISPQKQDSL 285
+ L RSS G + GS L +D P S + Q +S + S+
Sbjct: 507 KK-SLGEINRSSNGGGSKRCSLDGSQLDSSRDTDIGTPFSSPTPVSKPCQPVSTPEDSSI 565
Query: 286 S-PDHLAPSSVRSGTGSNVEPVIPDK 310
+ P H + S T S V P P++
Sbjct: 566 TPPKHPVLVFIDSPTASEVSPPKPEQ 591
>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
Length = 637
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 134/228 (58%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + C +GL +KP
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFCTMWVIGLGL-KKP 447
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 448 ENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRRKEL 494
>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
Length = 757
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 133/251 (52%), Gaps = 27/251 (10%)
Query: 2 LVSRFFRVYTMWRW----PNPVMLCAI-DEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
+++RFF++Y WRW P PV+LC I D VW+ +RDK+H MPI+TPAYP
Sbjct: 276 IINRFFKIYETWRWGVPGPTPVLLCPIQDGGIFAAKVWN---QKRDKSHLMPILTPAYPS 332
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
MNS+YNVS STL ++ D+F GN I +++E +A W+ L E FF Y+ YLQ+D A
Sbjct: 333 MNSTYNVSKSTLSLLKDEFARGNQIAQKLESGEANWNKLLEKSDFFSRYQFYLQIDCSAQ 392
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY------------------VD 158
N ++ W+GW+ES+LR+L +E+ K P+P + D
Sbjct: 393 NEEEHRKWEGWIESKLRKLISFLEQTPKMKFAI-PFPKSFENKPTPAATTTAANGEAVTD 451
Query: 159 TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRR 218
+ +FFMGL + DI +V +F I + P ME+ V +I+R
Sbjct: 452 ANNSNVCTSFFMGLGFNFSNAPGADKSVDITKAVIDFTHLIKDWAGKGPTMEMKVHYIKR 511
Query: 219 KQIPPYVFPEG 229
+Q+P +V E
Sbjct: 512 RQLPAFVKAEA 522
>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 745
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 143/252 (56%), Gaps = 10/252 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI---DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
L+ +FF + W WP PV+L A+ ++ L F VWDPR N D+ H MPIITPAYP N
Sbjct: 266 LLHKFFMIIHKWNWPQPVLLKALVHENKFNLSFPVWDPRVNTSDRFHLMPIITPAYPQQN 325
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
S++NV+ ST +M ++ + G I ++ + +W ALFEP FF+ Y++Y+ + A
Sbjct: 326 STFNVTLSTRSIMTEELKDGLEIVSKIYEGREEWGALFEPSNFFQKYKHYIVLTASAVEE 385
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVDTSKPCAHCAFFMGLQRKPG 177
D L W G+VES++R L +ER+ KL HP P ++ S C +F+GL
Sbjct: 386 KDYLEWHGYVESKIRLLVGNLERNPCIKLAHVHPSPLGPLNESDGEYLCRWFIGLTF--V 443
Query: 178 EVVQEGQQFDIRGSVEEFKLSINMYMF----WKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
++ + Q D+ ++ F +++ + + K GM++ + H++R+Q+ YV P+ ++
Sbjct: 444 KIENQNQNVDLTFDIQSFTNTVHKHAYHINLMKDGMKVEIKHVKRRQLDLYVPPKILLQS 503
Query: 234 RHPRLASQQRSS 245
+ +A + RSS
Sbjct: 504 KRAAVAQEHRSS 515
>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
Length = 664
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 157/315 (49%), Gaps = 46/315 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L +D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHLDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G +I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMSITDEIMLGRVGWDRLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-------------------DTSKP 162
L W G VES++R L +ER + L H P + D +
Sbjct: 396 LEWCGLVESKVRLLIGNLERIPHIVL-AHVNPKCFELKKGAATANNSQNNSGNEDDLKQQ 454
Query: 163 CAHCA---------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFWKPGM 209
A A +F+GL+ + E + D+ S++ F +NM+ K GM
Sbjct: 455 SAQAAVTTAPYCSLWFIGLEFERSENL----NIDLTESIQNFTEHVNMHGVNIKMLKEGM 510
Query: 210 EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQD 269
I H++RKQ+ Y+ + KR R +S EN N + KRK+ + Q
Sbjct: 511 SIVARHVKRKQLSVYLDADFLKRER--------KSMENHNNFNNSMMAKRKRLSSELAQ- 561
Query: 270 GPEKRQSISPQKQDS 284
E+ +P+ +DS
Sbjct: 562 SQEQVPPTNPRGRDS 576
>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
Length = 584
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 147/275 (53%), Gaps = 45/275 (16%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAE--LGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
+++SRFFRVY+ W+WPNPV+L +I + GF VW+P D+ H MP+ITPAYP MN
Sbjct: 276 VILSRFFRVYSQWKWPNPVLLTSISPGKPSCGFKVWNPAVFPADRKHLMPVITPAYPSMN 335
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEV--------------------------------- 85
S++NVS +TLR++ ++ G I +++
Sbjct: 336 STHNVSRTTLRIIQEEIHRGLEITDKILCQSNSSRKTISTEDTENDQTTQVEHSEETNLV 395
Query: 86 -ELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTY 144
E WS LFE FF ++NYLQ+++++ A++ W G+VES+LR LTL +E ++
Sbjct: 396 KETEVMTWSKLFERTDFFSKFKNYLQINVISGTAENQRKWHGFVESKLRVLTLKLEILSH 455
Query: 145 GKLQCHPYPHEYVDTSKPCAHC-AFFMGLQ----RKPGEVVQEGQQFDIRGSVEEFKLSI 199
+ +PYP Y T C +FF+GL + P + + ++ D+ G V E+ +
Sbjct: 456 TLI--YPYPVPY--TRPGVQFCESFFIGLSFSLPKLPNQNGSKERKIDMSGPVSEWVNYV 511
Query: 200 NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ F ME+ V H++RK +P YVF + R+R
Sbjct: 512 LSWPFRTSDMEVSVEHVKRKFLPEYVFKDENHRSR 546
>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
Length = 741
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPADRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPSETLQKKK 505
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 506 KQSLSDVSRSS 516
>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
Length = 736
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 506 KQSLSDVNRSS 516
>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
Length = 736
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 506 KQSLSDVNRSS 516
>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
Length = 741
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 506 KQNLSDVSRSS 516
>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
tropicalis]
Length = 752
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 138/252 (54%), Gaps = 10/252 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTY 325
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G ++ +E+ L + WS LFEP FF Y++Y+ + A+ +
Sbjct: 326 NVSISTRSVMVEEFKQGLSVTDEILLGRCDWSKLFEPPNFFHKYKHYIVLTASASTEEHH 385
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKPG 177
L W G VES++R L +ER+++ L H P + C + F+G+ K
Sbjct: 386 LEWVGLVESKIRVLVGNLERNSFITL-AHVNPQSFPGNRDHCKDNEYVSMWFLGIIFKKV 444
Query: 178 EVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
E E D+ ++ F ++ N K GM I +H++RKQ+ Y+ E ++
Sbjct: 445 ENA-ESVNIDLTHDIQSFTDTVYRQANNINMLKKGMRIEATHVKRKQLHHYLHAEVLQKR 503
Query: 234 RHPRLASQQRSS 245
+ + RS+
Sbjct: 504 KKQSVPDINRSA 515
>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
Length = 746
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 157/294 (53%), Gaps = 20/294 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+++FF +++ W WP PV+L ++E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LINKFFLIFSKWDWPKPVLLKRLEESFLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++FQ G + +E+ K+ WS LFEP FF+ Y++Y+ + A +
Sbjct: 327 NVSVSTRAVMVEEFQRGLEVTDEILKGKSDWSKLFEPLNFFQKYKHYIVLTASAFTEEHH 386
Query: 122 LAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGE 178
L W G V+S++R L +ER+ T +Q +P V + +F+GL K E
Sbjct: 387 LNWIGLVKSKIRVLVGNLERNEFITIAHVQPQSFPGNEVLYKQNAYVSMWFLGLVFKKAE 446
Query: 179 VVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ D+ ++ F ++ + K GM+I ++++RKQ+ Y P G + R
Sbjct: 447 SAVK-TNVDLTHGIQSFTDTVYRQASALNILKEGMKIEATYVKRKQL-HYFLPAGTLQKR 504
Query: 235 HPRLASQQRSSENGNEYQTGSGL--KRKKDPESVDQDGPEKRQSISPQKQDSLS 286
+QR S+ Q SGL KR ES DG + R S +P SL+
Sbjct: 505 -----KKQRVSDIS---QNNSGLQCKRSSLGESCS-DGSKDRDSRTPSNSSSLN 549
>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
Length = 430
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 29 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 88
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 89 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 148
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 149 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 207
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 208 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 267
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 268 KQSLSDVNRSS 278
>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
Length = 736
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 506 KQSLSDVSRSS 516
>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
Length = 736
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 506 KQSLSDVSRSS 516
>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
Length = 743
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 506 KQSLSDVNRSS 516
>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 264 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 323
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 324 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 383
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 384 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 442
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 443 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 502
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 503 KQSLSDVNRSS 513
>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
Length = 741
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 506 KQSLSDVTRSS 516
>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
Length = 740
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 506 KQSLSDVTRSS 516
>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
Length = 737
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 264 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 323
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 324 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 383
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 384 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 442
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 443 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 502
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 503 KQSLSDVTRSS 513
>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
Length = 740
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 506 KQSLSDVTRSS 516
>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
Length = 762
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 288 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 347
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 348 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 407
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 408 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 466
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 467 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 526
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 527 KQSLSDVSRSS 537
>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
Length = 741
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 138/251 (54%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ +
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEEHQ 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 506 KQSLSDVSRSS 516
>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
Length = 748
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 146/268 (54%), Gaps = 19/268 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 326 NVSTSTRTVMVEEFKQGLAVTNEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 385
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL---Q 173
L W G VES++R L +ER+ + L Q P E+ S + +F+G+ +
Sbjct: 386 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYVS--MWFLGIIFRR 443
Query: 174 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E +++
Sbjct: 444 VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEIFQKK 503
Query: 234 RHPRLASQQRSSENGNEYQTGSGLKRKK 261
+ L RS+ SGL+ K+
Sbjct: 504 KKQSLQDINRSA---------SGLQSKR 522
>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
Length = 642
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 133/229 (58%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E VD K + +GL +K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVD--KEEFRTMWVIGLVLKK 446
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
P E++ +DI+ + ++ +IN MF + M+I H+RRK++
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLRRKEL 494
>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
Length = 741
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 138/251 (54%), Gaps = 8/251 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRSS 245
L+ RSS
Sbjct: 506 KQSLSDVNRSS 516
>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
Length = 742
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 140/252 (55%), Gaps = 10/252 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL---Q 173
L W G VES++R L +ER+ + L Q P E+ + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKDNNYVS--MWFLGIIFRR 444
Query: 174 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++
Sbjct: 445 VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKK 504
Query: 234 RHPRLASQQRSS 245
+ L+ RSS
Sbjct: 505 KKQSLSDVNRSS 516
>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
Length = 736
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 139/250 (55%), Gaps = 8/250 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGSKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRS 244
L+ RS
Sbjct: 506 KQSLSDVSRS 515
>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
Length = 739
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 138/250 (55%), Gaps = 8/250 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
Query: 235 HPRLASQQRS 244
L+ RS
Sbjct: 506 KQSLSDVSRS 515
>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
Length = 739
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 141/241 (58%), Gaps = 10/241 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---VDTSKPCAHCA-FFMGLQRKPG 177
L W G VES++R L +ER+ + L H P + + +K + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHNKANNYVSMWFLGIIFRRV 445
Query: 178 EVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
E EG D+ ++ F ++ N+ K GM+I +H+++KQ+ Y+ E ++
Sbjct: 446 EHA-EGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQLHHYLPAEILQKK 504
Query: 234 R 234
+
Sbjct: 505 K 505
>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
Length = 751
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 137/252 (54%), Gaps = 10/252 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTY 325
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G + +E+ L + WS LFEP FF Y++Y+ + A+ +
Sbjct: 326 NVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNFFHKYKHYIVLTASASTEEHH 385
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKPG 177
L W G VES++R L +ER+ + L H P + C + F+G+ K
Sbjct: 386 LEWVGLVESKIRVLVGNLERNNFITL-AHVNPQSFPGNRDHCKDNEYVSMWFLGIIFKKV 444
Query: 178 EVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
E E D+ ++ F ++ N K GM+I +H++RKQ+ Y+ E ++
Sbjct: 445 ENA-ESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEATHVKRKQLHHYLPAEVVQKR 503
Query: 234 RHPRLASQQRSS 245
+ + RS+
Sbjct: 504 KKQSVPDINRSA 515
>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
boliviensis]
Length = 495
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 77
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 78 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 137
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 138 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 195
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 196 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 243
>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
Length = 817
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 127/227 (55%), Gaps = 5/227 (2%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WP PV+L +E+ LGF VWDPR N D+ H MPIITPAYP NS++
Sbjct: 288 LVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPIITPAYPQQNSTF 347
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS STL +M +F+ G I +E+ L ++ W LFEP FF Y++++ + + +
Sbjct: 348 NVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPNFFGKYKHFIVLMASTQSKEHH 407
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA---HCAFFMGLQRKPGE 178
L W G VES++R L +ER Y + H P + S+P +F+GLQ E
Sbjct: 408 LEWYGLVESKIRILISNLERHPYIAI-AHVNPESF-PPSEPEGDKLQSMWFIGLQFNKTE 465
Query: 179 VVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
V +D R V+ K +K ME+ + ++RR+++ Y+
Sbjct: 466 HVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYVRRRELVRYL 512
>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
Length = 750
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 137/252 (54%), Gaps = 10/252 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTY 324
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G + +E+ L + WS LFEP FF Y++Y+ + A+ +
Sbjct: 325 NVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNFFHKYKHYIVLTASASTEEHH 384
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKPG 177
L W G VES++R L +ER+ + L H P + C + F+G+ K
Sbjct: 385 LEWVGLVESKIRVLVGNLERNNFITL-AHVNPQSFPGNRDHCKDNEYVSMWFLGIIFKKV 443
Query: 178 EVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
E E D+ ++ F ++ N K GM+I +H++RKQ+ Y+ E ++
Sbjct: 444 ENA-ESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEATHVKRKQLHHYLPAEVVQKR 502
Query: 234 RHPRLASQQRSS 245
+ + RS+
Sbjct: 503 KKQSVPDINRSA 514
>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
Length = 637
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 133/228 (58%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + +GL +KP
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMWVIGLGL-KKP 447
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 448 ENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRRKEL 494
>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
Length = 636
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 133/228 (58%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A+
Sbjct: 328 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + +GL +KP
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMWVIGLGL-KKP 446
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 447 DNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAVHLRRKEL 493
>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
Length = 495
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 77
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 78 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 137
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 138 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 195
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 196 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 243
>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
Length = 732
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 136/246 (55%), Gaps = 18/246 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQR 384
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E +T K + +GL K
Sbjct: 385 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSE--NTEKEEFRTMWVIGLVFKK 442
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V P
Sbjct: 443 ME-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ENEMKIAAMHVKRKQLHQLLPSHVLP 500
Query: 228 EGYKRT 233
+ K +
Sbjct: 501 KKKKHS 506
>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
Length = 636
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 133/228 (58%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A+
Sbjct: 328 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + +GL +KP
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMWVIGLGL-KKP 446
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 447 DNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRRKEL 493
>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 133/228 (58%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + +GL +KP
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMWVIGLGL-KKP 447
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 448 DNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAVHLRRKEL 494
>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
Length = 709
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 141/241 (58%), Gaps = 10/241 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 259 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 318
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 319 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 378
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---VDTSKPCAHCA-FFMGLQRKPG 177
L W G VES++R L +ER+ + L H P + + +K + + +F+G+ +
Sbjct: 379 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHNKANNYVSMWFLGIIFRRV 437
Query: 178 EVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
E EG D+ ++ F ++ N+ K GM+I +H+++KQ+ Y+ E ++
Sbjct: 438 EHA-EGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQLHHYLPAEILQKK 496
Query: 234 R 234
+
Sbjct: 497 K 497
>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
Length = 640
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 202/398 (50%), Gaps = 44/398 (11%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF +++ W+WP PV+L +LG+ VWDPR N D+ H MPIITP YP NS++
Sbjct: 250 LIHKFFLIFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMADRNHVMPIITPVYPQQNSTF 309
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS STL ++ D+F+ I E+ ++ WS +F+P FF YR +L + + A ++L
Sbjct: 310 NVSHSTLAIIQDEFKTSLDIMGEILTGESSWSKIFQPSKFFTKYRYFLAITVFANCDEEL 369
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQC----HPYPHEYV---DTSKPCAHCAFFMGLQ- 173
L W+G VESRLR L +E +++C H P ++V D S+ +F+GL+
Sbjct: 370 LEWRGLVESRLRFLPTSLE-----EIECVQRSHLNPDQFVLPYDKSQGRPSSVWFVGLEI 424
Query: 174 -RKPGEVVQEGQQFDIRGSVEEFKLSIN--MYMFWKPGMEICVSHIRRKQIPPYVFPEGY 230
+ G VV D + +F L + + +K GM+I V+H++RK + YV E
Sbjct: 425 SKSNGTVV----NLDFSTHIRDFCLLVKSRAHTIFKAGMDIQVNHLKRKDLRDYVPDELK 480
Query: 231 KRTRHPRLASQQ---RSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSP 287
K P + R S G + + +K P S + G E + K++ LS
Sbjct: 481 KEKAIPNTVGSKIIARLSTEGRHSVSELVEESQKSPTS-RKRGIEDETDDNIIKKNLLSN 539
Query: 288 DHL----APSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVG 343
D + + S RS + N ++N ++ + N S++T +E ++G
Sbjct: 540 DDIFVLGSVESHRSPSSEN-----KSNNLVNTLLSTAKE--NHSLLTE--NETKENINIG 590
Query: 344 NESVAGSSEGNNGSVEGS---NNPVSSQSDCCDADSQS 378
ES+ ++ + ++E N+PVS++ CC AD +S
Sbjct: 591 KESLL-LTDARHSTIESGDSLNSPVSNK--CC-ADDES 624
>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 133/228 (58%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + +GL +KP
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMWVIGLGL-KKP 447
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 448 DNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRRKEL 494
>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
Length = 739
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 140/253 (55%), Gaps = 13/253 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPTNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA------FFMGL--- 172
L W G VES++R L +ER+ + L H P + + H A +F+G+
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE--HHKANNYVSMWFLGIIFR 443
Query: 173 QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 232
+ + E V +DI+ + N K GM+I +H+++KQ+ Y+ P +
Sbjct: 444 RVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL-PAEILQ 502
Query: 233 TRHPRLASQQRSS 245
+ L+ RSS
Sbjct: 503 KKKKSLSDVSRSS 515
>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
Length = 641
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 132/229 (57%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E D K + +GL +K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETAD--KEEFRTMWVIGLVLKK 445
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
P E++ +DI+ + ++ +IN MF + M+I H+RRK++
Sbjct: 446 PENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLRRKEL 493
>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
Length = 641
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 132/229 (57%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E D K + +GL +K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETAD--KEEFRTMWVIGLVLKK 445
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
P E++ +DI+ + ++ +IN MF + M+I H+RRK++
Sbjct: 446 PENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLRRKEL 493
>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
Length = 904
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 138/265 (52%), Gaps = 37/265 (13%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 289 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 348
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +VM+ +F G I +E+ L +A W LFE FF YR+++ + + + ADD
Sbjct: 349 NVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSFFYRYRHFIVLLVNSQTADDH 408
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QC-----------------------HPYP 153
L W G VES++R L +ER+ + L +C P P
Sbjct: 409 LEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESANNSQNNSGNEDDLKQPPP 468
Query: 154 HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFWKPGM 209
++ TS P +F+GL+ + E + D+ S++ F + M+ K GM
Sbjct: 469 NQASVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEHVIMHGVNIKMLKEGM 523
Query: 210 EICVSHIRRKQIPPYVFPEGYKRTR 234
I H++RKQ+ Y+ + KR R
Sbjct: 524 AIDARHVKRKQLTVYLDADFLKRER 548
>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
Length = 642
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 132/229 (57%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E D K + +GL +K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETAD--KEEFRTMWVIGLVLKK 446
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
P E++ +DI+ + ++ +IN MF + M+I H+RRK++
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLRRKEL 494
>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
Length = 671
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 14/234 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++RFF+VY W+WP PV+L + E L VW+ + RDK H MPI+TPAYP MNS+
Sbjct: 286 IINRFFKVYENWKWPAPVLLTHLVEGGALAAKVWNAK---RDKAHLMPILTPAYPMMNST 342
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS ST++++ ++F G I ++E N++ ++AL E FF YR Y+Q+D A N +D
Sbjct: 343 YNVSKSTMQLLKNEFVRGAEITRKIETNESTYNALLEKSDFFTRYRFYIQIDCSAGNEED 402
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT----SKPCAHC-AFFMGLQRK 175
W+GW+ES+LR L +E K P+P + + S P C FFMGL
Sbjct: 403 HRKWEGWIESKLRFLISNLEMTPKMKYAV-PFPKSFSNLIHKESHPDQICTTFFMGLVFN 461
Query: 176 PGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME----ICVSHIRRKQIPPYV 225
+ D+ +V EF +I ++ +P E I V +I++KQ+P ++
Sbjct: 462 FPTTPGADKSVDLTKAVSEFTSTIKEWLRTQPNPETMADIKVQYIKKKQLPSFI 515
>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
Length = 902
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 138/265 (52%), Gaps = 37/265 (13%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 288 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 347
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +VM+ +F G I +E+ L +A W LFE FF YR+++ + + + ADD
Sbjct: 348 NVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSFFYRYRHFIVLLVNSQTADDH 407
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QC-----------------------HPYP 153
L W G VES++R L +ER+ + L +C P P
Sbjct: 408 LEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESANNSQNNSGNEDDLKQPPP 467
Query: 154 HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFWKPGM 209
++ TS P +F+GL+ + E + D+ S++ F + M+ K GM
Sbjct: 468 NQASVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEHVIMHGVNIKMLKEGM 522
Query: 210 EICVSHIRRKQIPPYVFPEGYKRTR 234
I H++RKQ+ Y+ + KR R
Sbjct: 523 AIDARHVKRKQLTVYLDADFLKRER 547
>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
Length = 540
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 136/248 (54%), Gaps = 21/248 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 69 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 128
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 129 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 188
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 189 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE--FRTMWVIGLVFKK 246
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V
Sbjct: 247 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHVL- 303
Query: 228 EGYKRTRH 235
KR +H
Sbjct: 304 --QKRKKH 309
>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
Length = 739
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 140/253 (55%), Gaps = 13/253 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA------FFMGL--- 172
L W G VES++R L +ER+ + L H P + + H A +F+G+
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE--HHKANNYVSMWFLGIIFR 443
Query: 173 QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 232
+ + E V +DI+ + N K GM+I +H+++KQ+ Y+ P +
Sbjct: 444 RVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL-PAEILQ 502
Query: 233 TRHPRLASQQRSS 245
+ L+ RSS
Sbjct: 503 KKKKSLSDVSRSS 515
>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
Length = 634
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 133/228 (58%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 266 LVRKFFLVFSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y++Y+ + A
Sbjct: 326 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 385
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV----DTSKPCAHCAFFMGL-QRKP 176
L W G VES++R L +E++ + L H P ++ + K + +GL +KP
Sbjct: 386 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFLAPKENPGKKEFRTMWVIGLVLKKP 444
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 445 ENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-ETGMKIAAMHLRRKEL 491
>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
Length = 736
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 128/226 (56%), Gaps = 7/226 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 326 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 385
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + ++
Sbjct: 386 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 445
Query: 177 GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
E + +DI+ + ++ +IN MF + M+I H++RKQ+
Sbjct: 446 NENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 490
>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
Length = 739
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 140/253 (55%), Gaps = 13/253 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA------FFMGL--- 172
L W G VES++R L +ER+ + L H P + + H A +F+G+
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE--HHKANNYVSMWFLGIIFR 443
Query: 173 QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 232
+ + E V +DI+ + N K GM+I +H+++KQ+ Y+ P +
Sbjct: 444 RVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL-PAEILQ 502
Query: 233 TRHPRLASQQRSS 245
+ L+ RSS
Sbjct: 503 KKKKSLSDVSRSS 515
>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
Length = 637
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 133/228 (58%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIILLASASTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + +GL +KP
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLGL-KKP 447
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 448 ENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMHLRRKEL 494
>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
Length = 739
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 136/248 (54%), Gaps = 21/248 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE--FRTMWVIGLVLKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHVL- 502
Query: 228 EGYKRTRH 235
KR +H
Sbjct: 503 --QKRNKH 508
>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
AltName: Full=Polynucleotide adenylyltransferase alpha-B
gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
Length = 484
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 136/246 (55%), Gaps = 18/246 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 77
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y++Y+ + A
Sbjct: 78 NVSVSTRAVMVEEFKQGLAITDEILLVKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQR 137
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E ++ K + +GL K
Sbjct: 138 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPSPSE--NSEKEEFRTMWVIGLVFKK 195
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + ++I H++RKQ +P +V P
Sbjct: 196 ME-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ETEIKIAAMHVKRKQLHQLLPSHVLP 253
Query: 228 EGYKRT 233
+ K +
Sbjct: 254 KKKKHS 259
>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 739
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 140/258 (54%), Gaps = 18/258 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++R+Q +P +V
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHVKRRQLHQLLPNHVLQ 503
Query: 228 EGYKRTRHPRLASQQRSS 245
+ K + RL + SS
Sbjct: 504 KKKKHSSEVRLTALNDSS 521
>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
Length = 736
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 141/259 (54%), Gaps = 19/259 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 384
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 385 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD--KEEYRTMWVIGLVFKK 442
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V
Sbjct: 443 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQLHQLLPSHVLQ 500
Query: 228 EGYKR-TRHPRLASQQRSS 245
+ K T RLA+ SS
Sbjct: 501 KKKKHSTEGIRLATLNDSS 519
>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
Length = 738
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 140/258 (54%), Gaps = 18/258 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++R+Q +P +V
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHVKRRQLHQLLPNHVLQ 503
Query: 228 EGYKRTRHPRLASQQRSS 245
+ K + RL + SS
Sbjct: 504 KKKKHSSEVRLTALNDSS 521
>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
Length = 637
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 132/229 (57%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L ++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L KA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSISTRMVMIEEFKQGLAITHEILLRKAEWSKLFEAPSFFQKYKHYIVLLASATTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E D K + +GL +K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENTDMEK--FRTMWVIGLVLKK 446
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
P E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EVGMKITAMHLRRKEL 494
>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
Length = 763
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 145/268 (54%), Gaps = 19/268 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 341 NVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 400
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL---Q 173
L W G VES++R L +ER+ + L Q P E+ S + +F+G+ +
Sbjct: 401 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYVS--MWFLGIIFRR 458
Query: 174 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++
Sbjct: 459 VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKK 518
Query: 234 RHPRLASQQRSSENGNEYQTGSGLKRKK 261
+ L RS+ SGL+ K+
Sbjct: 519 KKQSLQDINRSA---------SGLQSKR 537
>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
Length = 731
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 136/246 (55%), Gaps = 18/246 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQR 384
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E ++ K + +GL K
Sbjct: 385 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSE--NSEKEEFRTMWVIGLVFKK 442
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V P
Sbjct: 443 ME-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ETEMKIAAMHVKRKQLHQLLPSHVLP 500
Query: 228 EGYKRT 233
+ K +
Sbjct: 501 KKKKHS 506
>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
Length = 759
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 127/227 (55%), Gaps = 5/227 (2%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WP PV+L +E+ LGF VWDPR N D+ H MPIITPAYP NS++
Sbjct: 339 LVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPIITPAYPQQNSTF 398
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS STL +M +F+ G I +E+ L ++ W LFEP FF Y++++ + + +
Sbjct: 399 NVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPNFFGKYKHFIVLMASTQSKEHH 458
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA---HCAFFMGLQRKPGE 178
L W G VES++R L +ER Y + H P + S+P +F+GLQ E
Sbjct: 459 LEWYGLVESKIRILISNLERHPYIAI-AHVNPESF-PPSEPEGDKLQSMWFIGLQFNKTE 516
Query: 179 VVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
V +D R V+ K +K ME+ + ++RR+++ Y+
Sbjct: 517 HVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYVRRRELVRYL 563
>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 606
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 153/327 (46%), Gaps = 46/327 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I++ L VW+PR +D+ H MPIITPAYP M +++
Sbjct: 256 IVSRFFIIMHRWSWPQPVLLKPIEDGPLQVRVWNPRLYPQDRNHRMPIITPAYPSMCATH 315
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV ST ++M ++F+ G+ I ++V + QWSALF + FF YR YLQV + + D
Sbjct: 316 NVMASTQQIMTEEFKRGSEIVDQVISGEVQWSALFAKHDFFFRYRFYLQVIASSPDLDTQ 375
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH---------------- 165
W G VES++RQL + +E KL HP+ + DT C
Sbjct: 376 NKWSGTVESKIRQLVMRLEFVDTLKL-AHPFIKGF-DTVYYCLSEDETRAVARGEIPEAV 433
Query: 166 -------------------CAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMYMFW 205
+FF+GL KP E G ++ DI EF I M W
Sbjct: 434 ANRKQEDIAGKEGATTMYTKSFFVGLSIKPKEAGATGPRKLDISYPTNEF---IKMVRLW 490
Query: 206 KP----GMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 261
+ M I V HI+ +P +VF +G +R R + R+++
Sbjct: 491 EKYDESQMNIVVRHIKHTALPDFVFDKG-EREAAARPKKRSRTAKESPAPSAKRSRMESD 549
Query: 262 DPESVDQDGPEKRQSISPQKQDSLSPD 288
P D + P KR +IS Q + +PD
Sbjct: 550 TPARPDSESPLKRSTISSQGRQLSTPD 576
>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
Length = 736
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 136/248 (54%), Gaps = 21/248 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 384
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 385 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE--FRTMWVIGLVFKK 442
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V
Sbjct: 443 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHVL- 499
Query: 228 EGYKRTRH 235
KR +H
Sbjct: 500 --QKRKKH 505
>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
Length = 742
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 136/248 (54%), Gaps = 21/248 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 271 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 330
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 331 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 390
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 391 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 448
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V
Sbjct: 449 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHVL- 505
Query: 228 EGYKRTRH 235
KR +H
Sbjct: 506 --QKRKKH 511
>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase
gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
Length = 739
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 136/248 (54%), Gaps = 21/248 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE--FRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHVL- 502
Query: 228 EGYKRTRH 235
KR +H
Sbjct: 503 --QKRKKH 508
>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 284 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 343
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 344 NVSVSTRMVMVEEFKQGPAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 403
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 404 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 461
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 462 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 509
>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
boliviensis]
Length = 634
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 133/229 (58%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 266 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 326 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 385
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E D K + +GL +K
Sbjct: 386 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVLKK 443
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
P E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 444 PENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-ETGMKIAAMHLRRKEL 491
>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
Length = 630
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 128/236 (54%), Gaps = 5/236 (2%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WP PV+L D L + VWDPR N D+ H MPIITPAYP NS++
Sbjct: 273 LVQKFFLVFSKWEWPQPVLLKPPDNVNLNYPVWDPRVNVSDRYHLMPIITPAYPQQNSTF 332
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM ++F+ G + EE+ KA W LFEP FF Y++++ + +++ +D
Sbjct: 333 NVSCSTRAVMQEEFRQGFNMTEEIMTGKASWDKLFEPPNFFVKYKHFIVLIASSSSVEDQ 392
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP---CAHCAFFMGLQRKPGE 178
L W G VES++R L L +ER+ + L H P +Y D +P +F+GL K E
Sbjct: 393 LEWVGLVESKIRHLILALERNDHITL-AHINPEQY-DPVQPEPDTISTMWFIGLVFKKTE 450
Query: 179 VVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ DI+ + + K G I H++RKQ+ Y+ RT+
Sbjct: 451 SLNIDLTQDIQAFTGQVHRQASTAKTVKDGRRIDAKHVKRKQLSSYLPSTFLLRTK 506
>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 295 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 354
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 355 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 414
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 415 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 472
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 473 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 520
>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
boliviensis]
Length = 736
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 135/240 (56%), Gaps = 8/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGSKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
Length = 642
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E VD K + +GL K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVD--KEEFRTMWVIGLVLKK 446
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RK++
Sbjct: 447 PE-NSESLSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLKRKEL 494
>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
Length = 804
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 327 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 386
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 387 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 446
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 447 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVFKK 504
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 505 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 552
>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 745
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
Length = 745
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
Length = 745
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
Length = 739
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
Length = 736
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 384
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 385 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 442
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 443 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 490
>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 739
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 136/248 (54%), Gaps = 21/248 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE--FRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHVL- 502
Query: 228 EGYKRTRH 235
KR +H
Sbjct: 503 --QKRKKH 508
>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
Length = 740
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
Length = 739
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 724
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
Length = 739
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
Length = 745
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 284 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 343
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 344 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 403
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 404 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 461
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 462 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 509
>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
Length = 729
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 136/248 (54%), Gaps = 21/248 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 384
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 385 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE--FRTMWVIGLVFKK 442
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V
Sbjct: 443 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHVL- 499
Query: 228 EGYKRTRH 235
KR +H
Sbjct: 500 --QKRKKH 505
>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
Length = 603
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 8/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 131 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 190
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 191 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 250
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 251 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYISMWFLGIIFRRV 309
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 310 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 369
>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
Length = 832
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 361 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 420
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 421 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 480
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 481 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 538
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 539 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 586
>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
Length = 739
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
Length = 736
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 384
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 385 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 442
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 443 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 490
>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
Length = 700
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 8/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 231 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 290
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 291 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 350
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 351 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 409
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 410 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 469
>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
Length = 744
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
familiaris]
Length = 738
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 8/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
Length = 739
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Cavia porcellus]
Length = 741
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 270 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 329
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 330 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 389
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 390 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 447
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 448 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 495
>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Ornithorhynchus anatinus]
Length = 740
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 446
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 447 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHVKRKQL 494
>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
Length = 650
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 140/253 (55%), Gaps = 13/253 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 324 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 383
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 384 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 443
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA------FFMGL--- 172
L W G VES++R L +ER+ + L H P + + H A +F+G+
Sbjct: 444 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE--HHKANNYVSMWFLGIIFR 500
Query: 173 QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 232
+ + E V +DI+ + N K GM+I +H+++KQ+ Y+ P +
Sbjct: 501 RVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL-PAEILQ 559
Query: 233 TRHPRLASQQRSS 245
+ L+ RSS
Sbjct: 560 KKKKSLSDVSRSS 572
>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
Length = 741
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 8/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
Length = 739
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 8/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
Length = 733
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 8/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 264 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 323
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 324 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 383
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 384 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 442
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 443 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 502
>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 8/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
Length = 736
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 8/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 264 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 323
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 324 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 383
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 384 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 442
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 443 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 502
>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 8/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 147/265 (55%), Gaps = 14/265 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E D + + +GL +K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEE--FRTMWVIGLVLKK 446
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 232
P E++ +DI+ + ++ ++N MF + GM+I H+RRK++ + P +
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMHLRRKEL-HQLLPHHVLQ 504
Query: 233 TRHPRLASQQRSSE-NGNEYQTGSG 256
+ + +R ++ N N + +G
Sbjct: 505 DKKAQATESRRLTDLNDNSFDLSAG 529
>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
Length = 755
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 284 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 343
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 344 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 403
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 404 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 461
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 462 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 509
>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
Length = 850
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 378 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 437
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 438 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 497
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 498 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD--KEEYRTMWVIGLVFKK 555
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 556 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQL 603
>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
Length = 621
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 150 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 209
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 210 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 269
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 270 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD--KEEYRTMWVIGLVFKK 327
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 328 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQL 375
>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
Length = 693
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|228152|prf||1717389A poly(A) polymerase
Length = 689
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
Length = 625
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 148/284 (52%), Gaps = 19/284 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WP PV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 279 LVHKFFLVFSKWKWPQPVLLKQPDTLNLNFPVWDPRVNVSDRYHLMPIITPAYPQQNSTF 338
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M D+ + G +I E++ L K W LFE FF YR+Y+ + + + + +D
Sbjct: 339 NVSLSTRSIMQDELKLGLSITEDIMLGKCGWEKLFETSHFFSKYRHYIVLLLSSNSPEDQ 398
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC---AFFMGLQRKPGE 178
L W G VES++R L +ER+ + L H P + +P ++ +F+G+
Sbjct: 399 LEWCGLVESKIRLLVGNLERNHHINL-AHVNPDSFQQPQEPDSNVLCTMWFIGVVFAKTG 457
Query: 179 VVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRL 238
+ +DI + WK GM++ +++RK++ Y+ P K+ + RL
Sbjct: 458 NLNVDLTYDIMSFTDTVVRQARASNIWKEGMKVVAKYVKRKELTSYLSPSVLKKEK--RL 515
Query: 239 ASQQRS---SENG---------NEYQTGSGLKRKKDPESVDQDG 270
+ + S+NG +T SG KK P +VD++
Sbjct: 516 NTTPNASPGSKNGGVQEKNKKRKMAETTSGPMAKK-PRAVDENA 558
>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
Length = 689
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
Length = 752
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 400
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 401 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD--KEEYRTMWVIGLVFKK 458
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 459 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQL 506
>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
Length = 736
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 133/240 (55%), Gaps = 8/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTNEILQGKSNWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL---QR 174
L W G VES++R L +ER+ + L H P + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
Length = 637
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 133/229 (58%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E D + + +GL +K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEE--FRTMWVIGLVLKK 446
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
P E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMHLRRKEL 494
>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 138/257 (53%), Gaps = 18/257 (7%)
Query: 2 LVSRFFRVYTMWRWPN-PVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
L+++FF VY W W PV+L I+E L F VW+P+ N RDK H MPIITP+YPCMNS+
Sbjct: 249 LLTKFFTVYQQWNWGKVPVLLRPIEEGTLNFKVWNPKLNPRDKQHLMPIITPSYPCMNST 308
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+NVS +TL+ M ++F+ G +I ++ E W LFE FF Y NYLQV+I +N D
Sbjct: 309 FNVSKTTLKDMKNEFERGASITQKAENGLENWETLFEATDFFVRYSNYLQVEINTSNEVD 368
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL---QRKPG 177
L W G+++S++R L +E L H YP + + F++GL Q KPG
Sbjct: 369 HLKWIGFIQSKVRFLIPKLE--AVPGLTIHIYPDYFHNNQGGAFSSYFYIGLEYKQTKPG 426
Query: 178 EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEIC----VSHIRRKQIPPYVFPEGYKRT 233
EG ++ + EF+ + W E + I+R IP +V + K+
Sbjct: 427 ----EGSVVNLASCIAEFE----ELLTWPDKNENMEKPKIQPIKRNAIPEFVISKKKKKE 478
Query: 234 RHPRLASQQRSSENGNE 250
+ +Q+R +E +E
Sbjct: 479 LMKKNKAQKRKAEQDDE 495
>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
Length = 737
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 327 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 387 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD--KEEYRTMWVIGLVFKK 444
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 445 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQL 492
>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 738
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 135/248 (54%), Gaps = 21/248 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+K +WS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 400
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 401 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD--KEEFRTMWVIGLVFKK 458
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V
Sbjct: 459 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHELLPNHVL- 515
Query: 228 EGYKRTRH 235
KR +H
Sbjct: 516 --QKRKKH 521
>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
Length = 626
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 162/345 (46%), Gaps = 60/345 (17%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I+E L VW+P+ D+ H MPIITPAYP M +++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATH 315
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST +M ++F+ G+ I ++V + A+WS LF + FF +R YLQV N+D
Sbjct: 316 NVTASTQMIMTEEFKKGSEIVDKVIVGTAEWSELFAKHDFFHKHRYYLQVIASTGNSDLQ 375
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC--------------- 166
+ W G VESR+RQL + +E ++ H ++ + +HC
Sbjct: 376 IKWSGTVESRIRQLVMKLEY-----VESLILAHPFIKGFEQVSHCISSEEVRAVAQGEVS 430
Query: 167 -----------------------AFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY 202
F++GL +P G ++ DI EF + M+
Sbjct: 431 EAVSKRRKEDIEGKEGASTVYSTTFYIGLLIEPKLPGSSGPRKLDISYPTTEFTKLVKMW 490
Query: 203 -MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 261
+ + M I V HI+ +P YV+ EG R PR A ++ S G++ G+
Sbjct: 491 EKYDEAKMGIIVRHIKSTALPDYVYDEG---ERQPRSAQKRVKSGKGSDKSNGT------ 541
Query: 262 DPESVDQDGPEKRQSISPQKQDSLSPDHLAP---SSVRSGTGSNV 303
S D ++R S S + S P + P ++V S TG+ V
Sbjct: 542 ---SPDMPNKKRRASNSLSESTSTMPLPMQPFKKAAVSSPTGAIV 583
>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
Length = 637
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 133/229 (58%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E D + + +GL +K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEE--FRTMWVIGLVLKK 446
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
P E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMHLRRKEL 494
>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 725
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 135/248 (54%), Gaps = 21/248 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+K +WS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 400
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 401 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD--KEEFRTMWVIGLVFKK 458
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V
Sbjct: 459 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHELLPNHVL- 515
Query: 228 EGYKRTRH 235
KR +H
Sbjct: 516 --QKRKKH 521
>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 582
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 141/285 (49%), Gaps = 38/285 (13%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W+WP PV+L I+E L VW+P+ D+ H MPIITPAYP M +++
Sbjct: 256 IVSRFFIIMYQWKWPQPVLLKTIEEGPLNVRVWNPKLYPTDRAHRMPIITPAYPAMCATH 315
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV ST ++ ++ + G+ + E++ + A WS LF + FF+ YR YLQV NAD
Sbjct: 316 NVMASTQMIITEELKKGSELVEKIIVGTADWSELFIKHDFFDKYRYYLQVIASTGNADLQ 375
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS--------KPCAH-------- 165
L W G VESR+RQL + +E L HP+ + S + A
Sbjct: 376 LKWSGTVESRIRQLVMKLEYVDSLTL-AHPFIKGFEQVSYCLSDEEVRAVAQGEISETVK 434
Query: 166 ------------------CAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY-MFW 205
F++GL +P + G ++ DI EF + M+ F
Sbjct: 435 KRVLEDIKDKEGASTVYTTTFYIGLAIEPKQPGSNGPRKLDISYPTTEFTKLVKMWEKFD 494
Query: 206 KPGMEICVSHIRRKQIPPYVFPEGYKRTR-HPRLASQQRSSENGN 249
+ M I V HIR +P YVF EG ++TR R + + S ++GN
Sbjct: 495 EAKMGIVVRHIRHTALPDYVFGEGGRQTRPQKRPKTSKNSGQSGN 539
>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Anolis carolinensis]
Length = 771
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 299 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 358
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 359 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 418
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 419 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVFKK 476
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++R+Q+
Sbjct: 477 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHVKRRQL 524
>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
garnettii]
Length = 637
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 141/252 (55%), Gaps = 16/252 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E + K + +GL +K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPEKEEFRTMWVIGLVLKK 446
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFPE 228
P E++ +DI+ + ++ +IN MF + M+I H++RK+ +P +V +
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAINTKMF-EMDMKIAAMHLKRKELHQLLPDHVLQK 505
Query: 229 GYKRTRHPRLAS 240
+T RL +
Sbjct: 506 KKTQTEGVRLTA 517
>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
lacrymans S7.9]
Length = 558
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 40/284 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I+E L VW+P+ D++H MPIITPAYP M S++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPADRSHRMPIITPAYPAMCSTH 315
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST +M ++F+ G I ++V + A+WS LF + FF YR YLQV +AD
Sbjct: 316 NVTASTQMIMTEEFKKGADIVDKVIVGTAEWSELFAKHDFFHKYRYYLQVIASTGSADLQ 375
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY------------------------- 156
+ W G VESR+RQL + +E + HP+ +
Sbjct: 376 IKWSGTVESRIRQLVMKLEY-VDSLILAHPFIKGFEQIAYCTSDEEVRAVAQGETSDAIT 434
Query: 157 ---------VDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY-MFW 205
V+ + F++GL +P + G ++ DI EF + M+ +
Sbjct: 435 RRKKEDIAGVEGATEVHTTTFYIGLAIEPKQPGAAGPRRLDISYPTTEFTKLVKMWEKYD 494
Query: 206 KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 249
+P M I V HI+ +P YVF EG R PR A ++ + G+
Sbjct: 495 EPTMGIVVRHIKSAALPDYVFDEG---ERQPRQALKRPKTAKGS 535
>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
Length = 493
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 130/237 (54%), Gaps = 12/237 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
L+ +FF V++ W WP PV+L IDE LGF VWDPR N D+ H MPIITPAYP NS+
Sbjct: 255 LIHKFFLVFSRWEWPQPVLLKQIDENNRLGFQVWDPRTNPMDRFHLMPIITPAYPQQNST 314
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS ST +M ++F+ G + +E+ KA W LFEP FF Y++Y+ + A + +
Sbjct: 315 YNVSLSTRAIMQEEFKIGLQVTQEIFEGKATWDKLFEPGSFFGKYKHYIVLSTSATSKEH 374
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--VDTSKPCAHCAFFMGLQRKPGE 178
L W G VES++R L +ER Y L H P +Y ++ + +F+GLQ
Sbjct: 375 HLEWVGLVESKVRILIGNLERTAYIAL-AHVNPKQYPPLNPQEDVFVTNWFIGLQFNK-- 431
Query: 179 VVQEGQQFDIRGSVEEFKLSINMYMF----WKPGMEICVSHIRRKQIPPYVFPEGYK 231
EG D+ ++ F +++ K GM+I +RRKQ+ Y+ P K
Sbjct: 432 --IEGGNIDLTFEIQSFTDTVHRQAISNGTLKEGMKIEARSVRRKQLGEYLPPSLLK 486
>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
[Oryctolagus cuniculus]
Length = 629
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 148/274 (54%), Gaps = 21/274 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E D + + +GL +K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTMWVIGLVLKK 446
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 232
P E++ +DI+ + ++ +IN F + M+I H+RRK++ + ++
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAINSKTF-EMDMKIDAMHLRRKELHQLLPNHVLQK 505
Query: 233 TRHP----RLASQQRS-----SENGNEYQTGSGL 257
+HP RL + S SEN + +GL
Sbjct: 506 KKHPAEGVRLTAVSDSSLGTDSENSMPVPSPTGL 539
>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
Length = 352
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 19 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 78
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 79 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 138
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 139 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 196
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 197 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHVKRKQL 244
>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
Length = 746
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 128/230 (55%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 275 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 334
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+K +WS LFE FF+ Y++Y+ + A
Sbjct: 335 NVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 394
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 395 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 452
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 453 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 500
>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
Length = 639
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 132/229 (57%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E D + + +GL +K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE--FRTMWVIGLVLKK 446
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
P EV+ +DI+ + ++ +IN MF + M+I H++RK++
Sbjct: 447 PENSEVLSIDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHLKRKEL 494
>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
Length = 640
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 139/246 (56%), Gaps = 14/246 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIALLASAPTEKQH 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQR-K 175
L W G VES++R L +E++ + L Q P P E D + + L+R +
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRESPDKEEFRTMWVIGLVLKRPE 447
Query: 176 PGEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFPEGY 230
+++ +DI+ + ++ ++N MF + M+I H+RRK+ +P +V P+
Sbjct: 448 NSDILSIDLTYDIQSFTDTVYRQAVNSKMF-EMDMKIAAMHLRRKELHQLLPNHVLPQ-- 504
Query: 231 KRTRHP 236
K+T P
Sbjct: 505 KKTPSP 510
>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
Length = 637
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 130/228 (57%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV ++F V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM++ F+ G I E+ L KA WS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEVFKQGLAITHEILLTKAVWSKLFEAPSFFQKYKHYIVLLASASTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + +GL +KP
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMWVIGLGL-KKP 447
Query: 177 --GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 448 DNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRRKEL 494
>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
Length = 844
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 128/230 (55%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 366 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 425
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+K +WS LFE FF+ Y++Y+ + A
Sbjct: 426 NVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 485
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 486 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 543
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 544 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 591
>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 532
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 145/301 (48%), Gaps = 23/301 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAID----EAELGFSVWDPRKNRRDKTHHMPIITPAYPCM 57
L+ FF+ ++ W+WP PV+L E VWDP N RD H MPIITP YP M
Sbjct: 239 LLQIFFKTFSTWKWPMPVLLSTQKQRPPEGVNNLPVWDPSSNFRDAKHLMPIITPCYPSM 298
Query: 58 NSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAAN 117
NSSYNV LR + D+F + +C +V +W LFE FF+ + NYLQVD VA N
Sbjct: 299 NSSYNVGEPQLRRLRDEFARASKLCSDVAFGTKKWGVLFEWNEFFQQHANYLQVDTVATN 358
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP---HEYVDTSKPCAHCAFFMGLQR 174
DD AW G E+R+R L +E +G ++ +P+ H D +FF+ L+
Sbjct: 359 EDDFRAWFGLCEARMRLLIAGLESPGFG-VRAYPFAKFFHRREDGGGGNYIASFFIALR- 416
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ + D+ V +F IN + +P M++ + + RK +P +VF + KR
Sbjct: 417 ----FANKVWKVDLAPLVTDFLTVINSWDGREPTMDLMIRLVSRKDLPSFVF-DAEKREE 471
Query: 235 H---PRL------ASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSL 285
H P L +S R+ E+ E Q + K E + ISP K+ +
Sbjct: 472 HITKPVLKPNNQQSSANRTDEDDVENQVNATTPSAKKNELDGSSTSSPSEFISPLKRTRI 531
Query: 286 S 286
S
Sbjct: 532 S 532
>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 707
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 135/248 (54%), Gaps = 21/248 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+K +WS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 400
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 401 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD--KEEFRTMWVIGLVFKK 458
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V
Sbjct: 459 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHELLPNHVL- 515
Query: 228 EGYKRTRH 235
KR +H
Sbjct: 516 --QKRKKH 521
>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
AltName: Full=Polynucleotide adenylyltransferase alpha-A
gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
Length = 715
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 136/246 (55%), Gaps = 18/246 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 250 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 309
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y++Y+ + A
Sbjct: 310 NVSVSTRAVMIEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQR 369
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L + P P E ++ K + +GL K
Sbjct: 370 LEWVGLVESKIRILVGSLEKNEFITLAHVNPRSFPAPSENME--KEEFRTMWVIGLVFKK 427
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI----PPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ+ P +V P
Sbjct: 428 ME-NSENLSVDLTYDIQSFTDTVDRQAINSKMF-ETEMKIAAMHVKRKQLHQLQPSHVSP 485
Query: 228 EGYKRT 233
+ K +
Sbjct: 486 KKKKHS 491
>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
Length = 629
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 143/304 (47%), Gaps = 40/304 (13%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I+E L VW+PR D++H MPIITPAYP M +++
Sbjct: 258 IVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPRLYPGDRSHRMPIITPAYPAMCATH 317
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST +M ++F+ G I +++ QWSALF + FF YR YLQ+ N D
Sbjct: 318 NVTESTQMIMTEEFKRGADIVDKIVFGSLQWSALFAKHDFFHKYRYYLQIIASTGNPDLQ 377
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH------CA-------- 167
+ W G VESR+RQL + +E L HP+ + D + C + CA
Sbjct: 378 IKWAGTVESRIRQLVMKLEYVDALTL-AHPFIKGF-DQTLHCLNDEEVRLCASGEVPEAV 435
Query: 168 ---------------------FFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY-MF 204
FF+GL +P + G ++ DI EF + M+ +
Sbjct: 436 LRRKKEEAEGKEGASTVHTTTFFIGLAIEPKQPGSTGPRRLDISYPTTEFTKLVKMWDKY 495
Query: 205 WKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPE 264
+ M I V HI+ +P YVF EG K R S R N K++K E
Sbjct: 496 DESSMGIVVRHIKNSSLPDYVFEEGAKPNLK-RAKSTNRGQGKSNNTTPDQPNKKQKKYE 554
Query: 265 SVDQ 268
D+
Sbjct: 555 VFDK 558
>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
Length = 497
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 129/232 (55%), Gaps = 16/232 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRK--NRRDKTHHMPIITPAYPCMNS 59
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSDRYHLMPIITPAYPQQNS 77
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 78 TYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEK 137
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQR 174
L W G VES++R L +E++ + L Q P P E D K + +GL
Sbjct: 138 QRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVF 195
Query: 175 KPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
K E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 196 KKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 245
>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
Length = 739
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P + D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKDNPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++R+Q+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRRQL 493
>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
Length = 857
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 192/419 (45%), Gaps = 81/419 (19%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 274 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 333
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G +I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 334 NVSESTKKVILTEFNRGMSITDEIMLGRVNWDRLFEAPSFFYRYRHFIVLLVNSQTADDH 393
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS---------------- 160
L W G VES++R L +ER+ + L +C V +
Sbjct: 394 LEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFELKKGAVTANNSQNNSGNEDDLKQQQ 453
Query: 161 ---------KPCA------HCAF-FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY-- 202
KP C+ F+GL+ + E + D+ S++ F + M+
Sbjct: 454 QQQQQQKDEKPATSTVAAPFCSLWFIGLEFERSENL----NIDLTESIQNFTEHVIMHGV 509
Query: 203 --MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRK 260
K GM I H++RKQ+ Y+ + KR R +S E+ N + T RK
Sbjct: 510 NIKMLKEGMAIDARHVKRKQLSVYLDADFLKRER--------KSMESHNNFNTTMLANRK 561
Query: 261 KDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSG-TGSNVEPVIPDKRVLNQEIAE 319
+ + + + + + P +Q S A SS R +G+ V L++ + E
Sbjct: 562 R----LSTELAQSQDPLPPGQQQS------AASSNRGRESGAKVHR-------LSESLNE 604
Query: 320 GGDVSN-SSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQ 377
D SN SS + V + + S + GNNG+ E S S C D +S+
Sbjct: 605 --DNSNASSDMGGVMPTTPTASQMNAPSFKAKAGGNNGTTESS-------SSCLDNNSE 654
>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
Length = 739
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 130/234 (55%), Gaps = 14/234 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFQAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
E E D+ ++ F + +IN MF + M+I H++RKQ+ P +
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHPLL 497
>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 709
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 135/248 (54%), Gaps = 21/248 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+K +WS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 400
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 401 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD--KEEFRTMWVIGLVFKK 458
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFP 227
E E D+ ++ F + +IN MF + M+I H++RKQ +P +V
Sbjct: 459 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQLHELLPNHVL- 515
Query: 228 EGYKRTRH 235
KR +H
Sbjct: 516 --QKRKKH 521
>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
Length = 820
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 157/319 (49%), Gaps = 49/319 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD---------------------- 158
L W G VES++R L +ER+ + L +P E+
Sbjct: 396 LEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQG 455
Query: 159 -----TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFWKPGM 209
TS P +F+GL+ + E + D+ S++ F + M+ K GM
Sbjct: 456 SQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEHVMMHGVNIKMLKEGM 510
Query: 210 EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK----DPES 265
I H++RKQ+ Y+ + KR R +S E+ N + T RK+ +S
Sbjct: 511 TIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFNTTLLANRKRLSTELAQS 562
Query: 266 VDQDGPEKRQSISPQKQDS 284
D P ++QS + +DS
Sbjct: 563 QDPLPPGQQQSSGNRGRDS 581
>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
Length = 506
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 137/240 (57%), Gaps = 8/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---VDTSKPCAHCA-FFMGL---QR 174
L W G VES++R L +ER+ + L H P + + K + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E V +DI+ + N K GM+I +H+++KQ+ Y+ E ++ +
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKK 505
>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 375
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 76/83 (91%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFFRV+T W+WPNPVMLCAI+ +LGFS+WDPRKN RD+ H MPIITPAYPCMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSS 327
Query: 61 YNVSTSTLRVMMDQFQYGNTICE 83
YNVSTSTLRV+M+QFQ+GN +C+
Sbjct: 328 YNVSTSTLRVIMEQFQFGNKVCQ 350
>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
Length = 508
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 133/231 (57%), Gaps = 8/231 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---VDTSKPCAHCA-FFMGL---QR 174
L W G VES++R L +ER+ + L H P + + K + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
+ E V +DI+ + N K GM+I +H+++KQ+ Y+
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 133/231 (57%), Gaps = 8/231 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---VDTSKPCAHCA-FFMGL---QR 174
L W G VES++R L +ER+ + L H P + + K + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
+ E V +DI+ + N K GM+I +H+++KQ+ Y+
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
Length = 818
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 156/319 (48%), Gaps = 49/319 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 278 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 337
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 338 NVSESTKKVILTEFNRGMNITDEIMLGRISWERLFEAPSFFYRYRHFIVLLVNSQTADDH 397
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEY------------------------ 156
L W G VES++R L +ER+ + L +P E+
Sbjct: 398 LEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFRKGQSANNSQNNSGNEDDLKQSQG 457
Query: 157 ---VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFWKPGM 209
TS P +F+GL+ + E + D+ S++ F + M+ K GM
Sbjct: 458 NQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEHVTMHGVNIKMLKEGM 512
Query: 210 EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK----DPES 265
I H++RKQ+ Y+ + KR R +S E+ N + RK+ +S
Sbjct: 513 TIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFNNTLLANRKRLSTELAQS 564
Query: 266 VDQDGPEKRQSISPQKQDS 284
D P ++QS + +DS
Sbjct: 565 QDPLPPGQQQSSGNRGRDS 583
>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
Length = 548
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
Length = 835
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 48/323 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 277 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 336
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 337 NVSESTKKVILTEFNRGMNITDEIMLGRIPWDRLFEAPSFFYRYRHFIVLLVNSQTADDH 396
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD---------------------- 158
L W G VES++R L +ER+ + L +P E+
Sbjct: 397 LEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANSSQNNSGNEDDLKQSQG 456
Query: 159 -----TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFWKPGM 209
TS P +F+GL+ + E + D+ S++ F + M+ K GM
Sbjct: 457 SQSSVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEHVMMHGVNIKMLKEGM 511
Query: 210 EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQD 269
I H++RKQ+ Y+ + KR R +S E+ N + RK+ + Q
Sbjct: 512 TIDARHVKRKQLSLYLDADFLKRER--------KSMESHNNFNNTLLANRKRLSTELAQS 563
Query: 270 G---PEKRQSISPQKQDSLSPDH 289
P +QS + +DS + H
Sbjct: 564 QDSLPSGQQSSGNRGRDSGAKIH 586
>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
Length = 642
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 132/229 (57%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR + D+ H MPIITPAYP NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVSPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGL-QRK 175
L W G VES++R L +E++ + L Q P P E D + + +GL +K
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE--FRTMWVIGLVLKK 446
Query: 176 P--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
P EV+ +DI+ + ++ +IN MF + M+I H++RK++
Sbjct: 447 PENSEVLSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLKRKEL 494
>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
Length = 699
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 134/257 (52%), Gaps = 40/257 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAE------LGFSVWDPRKNRRDKTHHMPIITPAYP 55
+++RFF +Y W+W NPV+LC I E +GF VW+P N +D+ H MPIITPA+P
Sbjct: 268 IINRFFYIYKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLNPQDRAHVMPIITPAFP 327
Query: 56 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVA 115
MNS++NV+ +TL V+ D+ Q I +++E +KA W ++ P+LFFE +++++QV +++
Sbjct: 328 SMNSTHNVTHTTLGVITDELQRAYRIIQDIENDKATWHDVWSPFLFFEKHKHFIQVKMLS 387
Query: 116 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 175
N W GW+ES+LR L +E T+ LQ P+P + + A F
Sbjct: 388 NNEQAFHKWIGWIESKLRFLVRKLE--TFKGLQVRPWPKAIQEQDE--AKDGFIFAQSMY 443
Query: 176 PGEVVQEGQQ---------------------FDIRGSVEEFKLSINMYMFW------KPG 208
G V+ D+RG++ +F + M W K
Sbjct: 444 IGLVLNNSNSNNGSSSTGVTGVSNSSGTAPVVDLRGAILDF---VGFIMNWSEVENYKDS 500
Query: 209 MEICVSHIRRKQIPPYV 225
+++ V H+R K +P ++
Sbjct: 501 IDLKVRHLRAKDLPKHL 517
>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 514
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
3'- Datp And Magnesium Chloride
Length = 514
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 129/230 (56%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D K + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRTMWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 493
>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
Length = 815
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 145/292 (49%), Gaps = 45/292 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYP----------------------- 153
L W G VES++R L +ER+ + L +C +
Sbjct: 396 LEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQG 455
Query: 154 HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFWKPGM 209
++ TS P +F+GL+ + E + D+ S++ F + M+ K GM
Sbjct: 456 NQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEHVMMHGVNIKMLKEGM 510
Query: 210 EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 261
I H++RKQ+ Y+ + KR R +S E+ N + RK+
Sbjct: 511 TIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFNNTLLANRKR 554
>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
Length = 827
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 145/292 (49%), Gaps = 45/292 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYP----------------------- 153
L W G VES++R L +ER+ + L +C +
Sbjct: 396 LEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQG 455
Query: 154 HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFWKPGM 209
++ TS P +F+GL+ + E + D+ S++ F + M+ K GM
Sbjct: 456 NQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEHVMMHGVNIKMLKEGM 510
Query: 210 EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 261
I H++RKQ+ Y+ + KR R +S E+ N + RK+
Sbjct: 511 TIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFNNTLLANRKR 554
>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
Length = 814
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 145/292 (49%), Gaps = 45/292 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYP----------------------- 153
L W G VES++R L +ER+ + L +C +
Sbjct: 396 LEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQG 455
Query: 154 HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFWKPGM 209
++ TS P +F+GL+ + E + D+ S++ F + M+ K GM
Sbjct: 456 NQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEHVMMHGVNIKMLKEGM 510
Query: 210 EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 261
I H++RKQ+ Y+ + KR R +S E+ N + RK+
Sbjct: 511 TIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFNNTLLANRKR 554
>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
Length = 659
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 144/292 (49%), Gaps = 45/292 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD---------------------- 158
L W G VES++R L +ER+ + L +P E+
Sbjct: 396 LEWCGLVESKVRLLISNLERNPHIALAHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQG 455
Query: 159 -----TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFWKPGM 209
TS P +F+GL+ + E + D+ S++ F + M+ K GM
Sbjct: 456 NQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEHVMMHGVNIKMLKEGM 510
Query: 210 EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 261
I H++RKQ+ Y+ + KR R +S E+ N + RK+
Sbjct: 511 TIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFNNTLLANRKR 554
>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
leucogenys]
Length = 735
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 138/255 (54%), Gaps = 12/255 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----------QCHPYPHEYVDTSKPCAHCAFFM 170
L W G VES++R L +ER+ + L + H + YV P + +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFPWDNFSESR 446
Query: 171 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 230
+ + Q + + ++ + N+ M K GM+I +H+++KQ+ Y+ E
Sbjct: 447 KXENAESVNIXXXQSYIQSFTDTVYRQANNINML-KEGMKIEATHVKKKQLHHYLPAEIL 505
Query: 231 KRTRHPRLASQQRSS 245
++ + L+ RSS
Sbjct: 506 QKKKKQSLSDVNRSS 520
>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
Length = 629
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 146/299 (48%), Gaps = 37/299 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I+E L VW+P+ D++H MPIITPAYP M S++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPAYPAMCSTH 315
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST ++ ++F+ G I ++V + A W+ LF + FF YR YLQV N +
Sbjct: 316 NVTQSTQMIVTEEFKKGADIVDKVIVGSATWADLFRKHDFFHKYRYYLQVIASTDNTETQ 375
Query: 122 LAWKGWVESRLRQLTLMIE-----------------------RDTYGKLQCHPYPH---- 154
+ W G VESRLRQL + +E D + C P
Sbjct: 376 IKWAGTVESRLRQLVMKLEYVDSLILAHPFIKGFDQVCHCSTEDEIRSVACGEIPEAVRK 435
Query: 155 ------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY-MFWK 206
+ V+ ++ AF++GL+ +P G ++ DI EF + M+ + +
Sbjct: 436 RKAEDIKNVEGAQTVYSTAFYIGLEIEPKPAGATGPRKLDISYPTTEFTKLVKMWEKYNE 495
Query: 207 PGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPES 265
M I V H++ +P YVF EG ++ R R + + ++ N + G ++ PES
Sbjct: 496 TTMGIYVRHMKSTSLPDYVFDEGERQPRQNRKRPKNNAGKSSN--ASPDGPNKRPRPES 552
>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 556
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 137/288 (47%), Gaps = 48/288 (16%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I++ L VW+PR D++H MPIITPAYP M +++
Sbjct: 258 IVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPRLYPADRSHRMPIITPAYPSMCATH 317
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M ++F+ G+ I E+V + QWS LF + FF YR YLQV + D
Sbjct: 318 NVSQSTQMIMTEEFKKGSEIVEKVIMGTTQWSELFVKHDFFHKYRYYLQVIASTGDPDLH 377
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC--------------- 166
+ W G VESR+RQL + +E + H +V + HC
Sbjct: 378 IKWAGTVESRIRQLVMKLEY-----VDSLTLAHPFVKGFEQVTHCLTDDEVRDAAQGEIS 432
Query: 167 -----------------------AFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY 202
F++GL +P + G ++ DI EF + M+
Sbjct: 433 DAIAKRKKEDIEGKEGASVVYSTTFYIGLAIEPKQAGAVGPRRLDISYPTTEFTKQVKMW 492
Query: 203 -MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 249
+ + M I V HI+ +P +VF EG R PR A ++ + G+
Sbjct: 493 EKYDESAMGIVVRHIKSTALPDHVFDEG---ERQPRSALKRPKTAKGS 537
>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 492
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WP PV+L +E +LGF VWDPR N D+ H MPIITPAYP NS++
Sbjct: 275 LVHKFFLVFSQWPWPKPVLLKQPEENKLGFPVWDPRINVADRFHLMPIITPAYPQQNSTF 334
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M +F+ G I +E+ L + +W LFEP FF Y++++ + +
Sbjct: 335 NVSVSTRTIMRQEFKQGLAITDEIMLGRTEWIKLFEPPNFFGKYKHFIVLMATTMTKEHH 394
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC------AHCAFFMGLQRK 175
L W G VES++R L +ER Y ++ H P + PC +F+GLQ
Sbjct: 395 LEWYGLVESKIRILISNLERHPYIEI-AHVNPESF----PPCEPDGDKLQSMWFIGLQFS 449
Query: 176 PGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRR 218
E V +DIR V+ K K ME+ + ++RR
Sbjct: 450 KTEHVNVDLTYDIRSFVDTVKRQATAINILKQDMEVDIKYVRR 492
>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
Length = 659
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 145/292 (49%), Gaps = 45/292 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYP----------------------- 153
L W G VES++R L +ER+ + L +C +
Sbjct: 396 LEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQG 455
Query: 154 HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFWKPGM 209
++ TS P +F+GL+ + E + D+ S++ F + M+ K GM
Sbjct: 456 NQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEHVMMHGVNIKMLKEGM 510
Query: 210 EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 261
I H++RKQ+ Y+ + KR R +S E+ N + RK+
Sbjct: 511 TIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFNNTLLANRKR 554
>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
Length = 652
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 139/292 (47%), Gaps = 44/292 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PVML I++ L VW+P+ D+ H MPIITPAYP M +++
Sbjct: 265 IVSRFFIIMYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATH 324
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST +M ++F+ + I + + + KA WS LF + FF YR YLQV D
Sbjct: 325 NVTQSTQMIMTEEFKKASDIVDNIIVGKASWSDLFAKHDFFHKYRYYLQVIASTGGPDVQ 384
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--------------------------- 154
+ W G VESR+RQL + +E L HP+
Sbjct: 385 IKWSGTVESRIRQLVMKLEYVESLAL-AHPFIKGFEQVSYCLTDEEVRAVAQGEISEAIA 443
Query: 155 -------EYVDTSKPCAHCAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMY-M 203
E V+ F++GL R+PG V ++ DI EF + M+
Sbjct: 444 KRKKEDIEGVEGGSAVYSTTFYIGLVVEPRQPGSV--GPRRLDISYPTTEFTKLVKMWEK 501
Query: 204 FWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGS 255
F + M I V HIR +P YVF EG R PRLA ++ +++ + + S
Sbjct: 502 FDENKMGIVVRHIRSAILPDYVFDEG---ERQPRLAQKRPNTKTTDRFNNTS 550
>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
Length = 561
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 133/249 (53%), Gaps = 34/249 (13%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELG----FSVWDPRKNRRDKTHHMPIITPAYPC 56
+++S FFR+Y+ W+WP PV LC I + VWDP + RD+ H MPIITPAYP
Sbjct: 271 VVLSAFFRLYSQWQWPKPVKLCPIIRHQHAGLRQLKVWDP-TDPRDRRHLMPIITPAYPS 329
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEV---------ELNKAQWSALFEPYLFFESYRN 107
MNS+YNV+ STLR+MM++F G IC +V ++ W L EP FF Y++
Sbjct: 330 MNSTYNVTHSTLRIMMEEFARGQQICADVLAAAGSDGTGVSPRDWERLLEPSDFFARYKH 389
Query: 108 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA 167
YLQ++I A N DDL W+G VESRLR L +E + HP+P + +
Sbjct: 390 YLQIEITAGNMDDLKKWRGHVESRLRLLVQRLE--VLPPVSVHPWP----EADERGTSVF 443
Query: 168 FFMGLQRKPGEVVQE----GQQFDIRGSVEEFKLSIN-------MYMFW---KPGMEICV 213
F+ GL+ + ++ +E + D+ VE + + + + W P M + V
Sbjct: 444 FYFGLRLETDKIAREEGTKRARIDLNSPVESWLSTPDPRDTRSVPVLHWPERTPDMLVHV 503
Query: 214 SHIRRKQIP 222
+ ++R Q+P
Sbjct: 504 TPLKRAQLP 512
>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
Length = 459
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 145/292 (49%), Gaps = 45/292 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 76 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHPMPIITPAYPQQNSTF 135
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 136 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 195
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYP----------------------- 153
L W G VES++R L +ER+ + L +C +
Sbjct: 196 LEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQG 255
Query: 154 HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFWKPGM 209
++ TS P +F+GL+ + E + D+ S++ F + M+ K GM
Sbjct: 256 NQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEHVMMHGVNIKMLKEGM 310
Query: 210 EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 261
I H++RKQ+ Y+ + KR R +S E+ N + RK+
Sbjct: 311 TIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFNNTLLANRKR 354
>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
98AG31]
Length = 529
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 131/263 (49%), Gaps = 39/263 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELG--FSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
+V+RFF V + W WP+PV+L AI +G VW+P+ +D+ H MPIITPAYPCM S
Sbjct: 251 IVNRFFAVLSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIYPQDRGHRMPIITPAYPCMCS 310
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
++NV+ ST +VMM +F+ G + + + AQWSALFE + FF YRNY+Q+ + AD
Sbjct: 311 THNVTKSTAQVMMTEFKRGLAVTDAIATGSAQWSALFEKHDFFTRYRNYIQITASSPEAD 370
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH-------------- 165
L W G VESRLR L L +E + HP+ + +T+
Sbjct: 371 AHLKWAGTVESRLRLLVLKVEEIETVDM-AHPFIKGFSNTTYALNRQEVSLVQGGDMPNE 429
Query: 166 --------------------CAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMYM- 203
C+FF+GL P V G ++ DI V EF + +
Sbjct: 430 IASRIPEDYENRADVEVVHTCSFFVGLLVHPKPVGHVGPRKLDITYPVGEFTRMVKQWEG 489
Query: 204 FWKPGMEICVSHIRRKQIPPYVF 226
+ + M I V HI++ P +
Sbjct: 490 YSEDKMSISVRHIKKSVYPSFFL 512
>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
Length = 880
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 146/296 (49%), Gaps = 50/296 (16%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 287 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPIITPAYPQQNSTF 346
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G +I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 347 NVSESTKKVILTEFNRGMSITDEIMLGRVSWDRLFEAPSFFYRYRHFIVLLVNSQTADDH 406
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPY------------------------ 152
L W G VES++R L +ER+ + L +C
Sbjct: 407 LEWCGLVESKVRLLIGNLERNPHIVLAHVNPKCFELKKGAASANNSQNNSGNEEDLKQQQ 466
Query: 153 --PHEYVDTSKPCAHCAF-FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY----MFW 205
P + T+ P C+ F+GL+ + E + D+ S++ F + M+
Sbjct: 467 QQPAQTAVTTAP--FCSLWFIGLEFERSENL----NIDLTESIQNFTEHVIMHGLNIKML 520
Query: 206 KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 261
K GM I H++RKQ+ Y+ + KR R +S E+ N + RK+
Sbjct: 521 KEGMAIDARHLKRKQLSLYLDADFLKRER--------KSMESHNNFNNTLLANRKR 568
>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
Length = 698
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 133/251 (52%), Gaps = 20/251 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+V+RFFRV+ W WP PV L A++E L W+P N D H MPIITPAYP MNS+
Sbjct: 316 IVARFFRVFHNWSWPTPVWLKAMEEDRSLALPNWNPVINASDARHLMPIITPAYPSMNST 375
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI-VAANAD 119
+NVS STLRVM ++F G + ++E+ K W LFE FF Y+ Y+Q+ N D
Sbjct: 376 HNVSMSTLRVMTEEFARGMQVTLDIEVGKVGWPVLFEKNNFFTRYKTYIQISARTEENQD 435
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-----VDTSKPCAHCAFFMGLQR 174
+ W+G+VES+LR +E G HPYP + ++ +P F+ G+
Sbjct: 436 EHRQWEGFVESKLRMFLQWLE-SAPGVDYVHPYPKTFSQTDTTESGQPVYLTIFYFGMMF 494
Query: 175 KPGEVVQEG---QQFDIRGSVEEFKLSI---NMYMFWKPGMEICVSHIRRKQIPPYVFPE 228
K QEG + ++ V +F+ +I N P +++ V ++R Q+P VF
Sbjct: 495 KK----QEGTDPRVIELGNIVRDFREAIKNQNASFVNNPRVDLVVLPMKRPQLPENVFEG 550
Query: 229 GYK--RTRHPR 237
G + T+ P+
Sbjct: 551 GVRPAPTKRPK 561
>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
Length = 872
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 146/302 (48%), Gaps = 56/302 (18%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPIITPAYP NS++
Sbjct: 288 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPIITPAYPQQNSTF 347
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +V++ +F G I +E+ L + W LFE FF YR+++ + + + ADD
Sbjct: 348 NVSESTKKVILTEFNRGMNITDEIMLGRVPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 407
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEY------------------------ 156
L W G VES++R L +ER+ + L +P E+
Sbjct: 408 LEWCGLVESKVRLLIGNLERNAHIALAHVNPKCFEFKKGQSANSSQNNSGNEDDPKQTQQ 467
Query: 157 -------------VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY- 202
V +S C+ +F+GL+ + + + D+ S++ F + M+
Sbjct: 468 QQTNNQANAAASTVTSSPFCS--MWFIGLEFERSDNL----NIDLTESIQNFTEHVIMHG 521
Query: 203 ---MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKR 259
K GM I H++RKQ+ Y+ + KR R +S EN N + R
Sbjct: 522 VNIKMLKEGMTIDARHVKRKQLSLYLDADFLKRER--------KSMENHNNFNNTLLANR 573
Query: 260 KK 261
K+
Sbjct: 574 KR 575
>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 628
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 40/284 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M +++
Sbjct: 261 IVSRFFIIMYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPADRAHRMPIITPAYPSMCATH 320
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST +M ++F+ + I ++V +NKA WS LF + FF YR YLQV + +
Sbjct: 321 NVTQSTQMIMTEEFKKASEIVDKVIINKASWSDLFARHDFFHKYRYYLQVIASTGSPELQ 380
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--------------------------- 154
+ W G VESR+RQL + +E L HP+
Sbjct: 381 VKWSGTVESRVRQLVMKLEYVESLAL-AHPFIKGFEQVSYCINDEEVRSVAQGEVSEAVA 439
Query: 155 -------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY-MFW 205
E ++ + F++GL +P + G ++ DI EF + M+ F
Sbjct: 440 RRKKEDIEGIEGASAVYSTTFYIGLAVEPKQPGAVGPRRLDISYPTTEFTKLVKMWEKFD 499
Query: 206 KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 249
+ M I V HI+ +P YVF +G R PRLA ++ E +
Sbjct: 500 EQKMGIVVRHIKSSALPEYVFDDG---ERQPRLAQKRPKKETTD 540
>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 615
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 147/306 (48%), Gaps = 43/306 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I++ L VW+P+ D++H MPIITPAYP M +++
Sbjct: 258 IVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITPAYPAMCATH 317
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST +M ++F+ G I ++V + A WS LF + FF YR YLQV N+D
Sbjct: 318 NVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKYRYYLQVIASTGNSDLQ 377
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--------------------------- 154
+ W G VESR+RQL + +E L HP+
Sbjct: 378 IKWAGTVESRIRQLIMKLEYVESLTL-AHPFIKGFDQVAYCLNEEEVRAIAQGETSPAIA 436
Query: 155 -------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY-MFW 205
E + + P F++GL +P + G ++ DI EF + ++ +
Sbjct: 437 ARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPTIEFTKQVKLWEKYD 496
Query: 206 KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGL--KRKKDP 263
+ M + V HIR +P YVF G + P +Q+R+ G + T + KR++
Sbjct: 497 ESTMGLIVRHIRSSSLPDYVFDPGER----PPKVTQKRTKGPGKTHNTSPDMPNKRQRSS 552
Query: 264 ESVDQD 269
+SV D
Sbjct: 553 QSVTTD 558
>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
Length = 860
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 145/274 (52%), Gaps = 17/274 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV++FF +++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 404 LVNKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTY 463
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST V++++ ++G + E+ K+ W LFE FF+ Y++Y+ + +
Sbjct: 464 NVSTSTRAVVVEELKHGLAVTNEILQGKSDWPKLFEQPNFFQKYKHYIVLTASTYTEEHH 523
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKPG 177
L W G VES++R L +ER+ + + H P + + C + F+G+ +
Sbjct: 524 LEWVGLVESKIRVLVGNLERNEFINI-AHVNPQSFPGNQEHCKQSRYVSMWFLGIIFRKL 582
Query: 178 EVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
E E + D+ ++ F ++ N K GM+I ++++RK + Y P G +
Sbjct: 583 ENT-ESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHL-HYFLPAGTLQK 640
Query: 234 RHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD 267
R +++S N ++ TG KR ES++
Sbjct: 641 R------KKQSILNISQNATGLRCKRASSNESLN 668
>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
Length = 716
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 183/407 (44%), Gaps = 42/407 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF +++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 266 LVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTY 325
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST V++++ ++G + E+ ++ W LFE FF+ Y++Y+ + +
Sbjct: 326 NVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYKHYIVLTASTYTEEHH 385
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGL---QR 174
L W G VES++R L +ER+ + + H P + + C + F+G+ +
Sbjct: 386 LEWVGLVESKIRVLVGNLERNEFINI-AHVNPQSFPGNQEHCKQSRYVSMWFLGIIFRKL 444
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ E + +DI+ + N K GM+I ++++RK + Y P G + R
Sbjct: 445 ESAESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHL-HYFLPAGTLQKR 503
Query: 235 HPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 294
+ N Q SGL+ K+ + + S +P SLS +S
Sbjct: 504 --------KKQSMLNISQNASGLRCKRASSNESLNSSRDNHSRTPYNSSSLSMISKLDTS 555
Query: 295 V----RSGTGSNVE----------------PVIPDKRVLNQEIAEGGDVSNSSVITSV-- 332
R+ +N E PVI K I G S+ ++ T +
Sbjct: 556 TAEMERTNGANNREKMTHVPVSPVSKGISIPVIGSKMEAAVAIRTSGAPSDCTIPTVIGR 615
Query: 333 --TSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQ 377
S++ +C G+ ++G+ N+ S P S S C S+
Sbjct: 616 NAISQLTTCFVQGHHELSGTQITNSKSA-APKRPHSPASKECSKRSK 661
>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
bisporus H97]
Length = 615
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 147/306 (48%), Gaps = 43/306 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I++ L VW+P+ D++H MPIITPAYP M +++
Sbjct: 258 IVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITPAYPAMCATH 317
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST +M ++F+ G I ++V + A WS LF + FF YR YLQV N+D
Sbjct: 318 NVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKYRYYLQVIASTGNSDLQ 377
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--------------------------- 154
+ W G VESR+RQL + +E L HP+
Sbjct: 378 IKWAGTVESRIRQLIMKLEYVESLTL-AHPFIKGFDQVAYCLNEEEVRAIAQGETSPAIA 436
Query: 155 -------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY-MFW 205
E + + P F++GL +P + G ++ DI EF + ++ +
Sbjct: 437 ARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPTIEFTKQVKLWEKYD 496
Query: 206 KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGL--KRKKDP 263
+ M + V HIR +P YVF G + P +Q+R+ G + T + KR++
Sbjct: 497 ESTMGLIVRHIRSSSLPDYVFDPGER----PPKVTQKRTKGPGKTHNTSPDMPNKRQRSS 552
Query: 264 ESVDQD 269
+SV D
Sbjct: 553 QSVTTD 558
>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 1765
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 2 LVSRFFRVYTMWRWPN-PVMLCAIDE----AELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ RFF +Y+ W+W + PV + I E +L W P R+ M IITP +PC
Sbjct: 1362 LIERFFFLYSHWKWHDLPVYVEHIQEDVANTKLNADQWRPEFRDRNS---MMIITPCFPC 1418
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
MN+++NVS +TLR++ +Q QYGN I +++ N+ +S LF+P+ FF+ Y+++LQ++IVA
Sbjct: 1419 MNTAHNVSPTTLRIIQEQLQYGNRIINKIKKNEKTFSDLFKPFNFFKRYKHFLQINIVAT 1478
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEY 156
N +D + WKG VESRLR+LT + E+ + KL Q HPYP+ +
Sbjct: 1479 NKNDHIVWKGHVESRLRKLTKLFEQSIHNKLIQVHPYPNPF 1519
>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
Length = 670
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 122/229 (53%), Gaps = 14/229 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
LV++FF V+T W WP PV+L + + ELGF+ WDPR N D+ H MPIITPAYP NS+
Sbjct: 262 LVNKFFLVFTKWAWPQPVLLKPPNTSTELGFAEWDPRVNVSDRFHLMPIITPAYPQQNST 321
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS ST V+ + Q G I +E+ KA W LFE FF Y++Y+ + A N DD
Sbjct: 322 YNVSQSTKTVIEQELQGGLAITQEIMQGKATWEKLFESSNFFGKYKHYIVLIASAGNEDD 381
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC----------AHCAFFM 170
L W G VES++R L +ER+ + KL H YP + + S P +F+
Sbjct: 382 HLKWVGLVESKIRVLVGNLERNPHIKL-AHVYP-KSISPSTPLDGSEEEKTDEHSTLWFI 439
Query: 171 GLQRKP-GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRR 218
GL+ +P G DI+ V + GM+I H++R
Sbjct: 440 GLEFQPLGPATNVNLTLDIQFFVNTVHRHSVTIKLLQEGMKIEAKHVKR 488
>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
Length = 723
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 125/227 (55%), Gaps = 8/227 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L ++ L VWDPR D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M+++F+ G I +E+ NKA WS LFE FF+ Y++Y+ + A
Sbjct: 327 NVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKHYIVLLASAQTEKQH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + ++
Sbjct: 387 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPKEGNDKEEFSTMWVIGIVFKKME 446
Query: 177 G-EVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
G E + FDI+ + ++ +I MF + M+I H++RKQ+
Sbjct: 447 GSENLNVDLTFDIQSFTDTVYRQAITSKMFEQ-DMKITAMHVKRKQL 492
>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
Length = 607
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 134/270 (49%), Gaps = 49/270 (18%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I++ L VW+P+ +D++H MPIITPAYP M +++
Sbjct: 256 IVSRFFVIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRSHRMPIITPAYPSMCATH 315
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV ST ++M ++FQ G I ++V L KA+WSALF + FF+ YR YLQV VAA+ D
Sbjct: 316 NVMQSTQQIMKEEFQRGCAIVDDVMLGKAEWSALFVKHDFFQRYRFYLQV--VAASRDLE 373
Query: 122 L--AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH-------------- 165
+ W G V S++RQL + +E KL HP+ + D C
Sbjct: 374 MQNKWSGTVASKIRQLVMRLEYVDALKL-AHPFIKGF-DVVYYCLSEEEAQVVTRGEIPP 431
Query: 166 ---------------------CAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMYM 203
+FF+GL KP E G ++ DI EF + M
Sbjct: 432 AVAQRKKEDVADKEGVITVHTTSFFIGLSIKPKEAGSTGPRRLDISYPTTEF---VKMTK 488
Query: 204 FWKP----GMEICVSHIRRKQIPPYVFPEG 229
W+ M I V HI+ +P +VF G
Sbjct: 489 MWEKYDESAMHIAVRHIKHTVLPDFVFEPG 518
>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
B]
Length = 629
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 159/358 (44%), Gaps = 54/358 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M +++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATH 315
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +M ++F+ G+ I ++V + KA WS LF + FF YR YLQV + +
Sbjct: 316 NVSASTQMIMTEEFKKGSEIVDKVIVGKANWSELFAKHDFFHKYRYYLQVIASTGSQELQ 375
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--------------------------- 154
W G VESR+RQL + +E L HP+
Sbjct: 376 TKWAGTVESRIRQLVMKLEYVDSLTL-AHPFIKGFEQVSCCLSDEEVRAVAQGEISEVIA 434
Query: 155 -------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY-MFW 205
E D + F++GL +P + G ++ DI EF + M+ +
Sbjct: 435 KRKKEDIEGKDGASTVYSTTFYIGLAIEPKQPGAVGPRKLDISYPTTEFTKLVKMWEKYD 494
Query: 206 KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ-RSSENGNEYQTGSGLKRKKDPE 264
M I V HI+ +P YVF G R PR A ++ ++S+N ++ S
Sbjct: 495 DSTMGIVVRHIKSTALPDYVFEPG---ERQPRSAQKRPKTSKNADKSNNTS--------- 542
Query: 265 SVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSG-TGSNVEPVIPDKRVLNQEIAEGG 321
D P K++ S +SL+ L P ++ G IP L + G
Sbjct: 543 ---PDMPNKKRRASNSVSESLATTPLPPQPFKTAQNGVTSTAAIPSPIALTAASSSNG 597
>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
Length = 615
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 132/268 (49%), Gaps = 38/268 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V++ W+WP PV+L D LGF VWDPR N D+ H MPIITPAYP NS++
Sbjct: 279 LLHKFFLVFSQWKWPQPVLLKPPDSVNLGFPVWDPRVNMSDRYHLMPIITPAYPQQNSTF 338
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS+ST V+M++F+ G I +E+ L K W LFE FF Y++++ + +AN D
Sbjct: 339 NVSSSTRTVIMEEFRLGLAITDEIMLGKCGWERLFEAANFFSRYKHFIVLLASSANTLDQ 398
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY------VDTSKPCA----------- 164
L W G VES++R L +ER+ + + H P Y + P A
Sbjct: 399 LPWCGLVESKIRHLITTLERNQHITI-AHVNPECYNSVPLNTNNGHPLALPPGTPVQTEE 457
Query: 165 HCAFFMGLQRKPGEVVQE-------GQQFDIRGSVEEFKLSINMYM-----------FWK 206
H A ++ GE+V G FD + I+ + +
Sbjct: 458 HGA--AEVKNDKGEIVANVCSMWFIGLVFDKTNVNVDLTYDISSFTKAVHYQAENTNVLR 515
Query: 207 PGMEICVSHIRRKQIPPYVFPEGYKRTR 234
GM I H+RRKQ+ Y+ P +R +
Sbjct: 516 EGMTIEARHVRRKQLHQYLSPSLLRREK 543
>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
magnipapillata]
Length = 351
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 142/253 (56%), Gaps = 15/253 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
LV +FF +Y+ W WP PV+L + E +L F +WDPR N D+ H MPIITPAYP NS+
Sbjct: 103 LVQKFFLIYSKWAWPQPVLLKQMPTENKLNFPIWDPRMNPADRFHLMPIITPAYPQQNST 162
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+NVS S+ VM D F+ G + EE+ + W ALF P FF+ Y++Y+ + + +++
Sbjct: 163 FNVSMSSRTVMQDAFKRGFQVMEEIYSKTSTWKALFAPANFFQKYKHYIVLSAYSNSSEH 222
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
L W+G VES++R L + +ER+ + KL +P ++ + S+ +F+GL+ + E
Sbjct: 223 HLEWEGLVESKIRILIVNLERNQFVKLAHVNPKSYDPILKSESGTVSRWFIGLEFQKPEG 282
Query: 180 VQEGQQFDIRGSVEEFKLSIN----MYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRH 235
+ + DI ++ F +++ ++ GM H+++KQ+ Y+ P R +
Sbjct: 283 TK-NVKVDITAEIQYFTSTVHKQACQIAIFREGMRTEARHVKKKQLSNYL-PNTVLRLK- 339
Query: 236 PRLASQQRSSENG 248
++SS NG
Sbjct: 340 ------KKSSLNG 346
>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
Length = 496
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 126/222 (56%), Gaps = 8/222 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---VDTSKPCAHCA-FFMGL---QR 174
L W G VES++R L +ER+ + L H P + + K + + +F+G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRV 445
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHI 216
+ E V +DI+ + N K GM+I +H+
Sbjct: 446 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHV 487
>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 671
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 133/262 (50%), Gaps = 37/262 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELG--FSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
+V+RFF V + W WP+PV+L I G +W+P+ +D+ H MPIITPAYPCM S
Sbjct: 264 IVNRFFAVLSQWNWPSPVLLKPIGPGPPGDQRRIWNPKIYPQDRGHRMPIITPAYPCMCS 323
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
++N++ ST ++MM +F+ G + +E+ W+ALF+ + FF YR YLQ+ + NA+
Sbjct: 324 THNITKSTAQIMMTEFKRGLAVTDEIATGTKPWAALFDKHDFFTRYRYYLQITASSPNAE 383
Query: 120 DLLAWKGWVESRLRQLTLMI----------------ERDTY-------GKLQCHPYPH-- 154
L W G VE+RLRQL + + ER++Y +Q P
Sbjct: 384 IQLKWAGTVEARLRQLVMKVEEVETVDLAHPFIKGFERESYYLTSDEVRAIQVGDVPPDV 443
Query: 155 --------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMYM-F 204
E + S +FF+GL +P G ++ DI V EF + + +
Sbjct: 444 KGRTLADIEGKEGSGAVYTSSFFIGLLVQPKPAGHTGPRKLDISYPVGEFTRMVKQWEGY 503
Query: 205 WKPGMEICVSHIRRKQIPPYVF 226
+ M I V +I+ Q+P YVF
Sbjct: 504 AEDSMGIIVRYIKGAQLPDYVF 525
>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
Length = 610
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 156/345 (45%), Gaps = 44/345 (12%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++VSRFF + W+WPNPV+L I+E L VW+P+ D+ H MPIITP YP M S+
Sbjct: 258 VIVSRFFIIMREWKWPNPVLLKQIEEGPLQVRVWNPKLYPSDRAHRMPIITPNYPSMCST 317
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+NVS ST ++ + + + I + + + A WS LF + FF YR YLQV NAD
Sbjct: 318 HNVSQSTQMIIKHELRRASEIVDRIIMGSATWSELFAKHDFFHKYRYYLQVIASTENADL 377
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH-----EYVDTSKPCAHCA-------- 167
L W G VESRLRQL + +E + HP+ Y+ T + A
Sbjct: 378 QLKWAGTVESRLRQLVMKLEY-VDSLVLAHPFIKGFDQTHYLLTEEEVRFVAQGFVSDVI 436
Query: 168 ---------------------FFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMYM-F 204
F++GL +P + G ++ DI EF + M+ F
Sbjct: 437 SKRTKEDIEGKDGAQIVYTTTFYIGLAIEPKQPGAVGPRKLDISYPTAEFTKLVKMWENF 496
Query: 205 WKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPE 264
M I V HI+ +P YVF ++ + +L + S N + KK
Sbjct: 497 DDSKMGIVVRHIKSTMLPDYVFDPSERQPKQ-QLKRTKSSKSTSNNADASPDMPNKKRRS 555
Query: 265 SVDQ-DGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIP 308
S++ + P ++S +L P LA + S + S P+ P
Sbjct: 556 SLNMSETPRSESALS-----ALPPSPLADLNATSRSPSVKSPINP 595
>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
Length = 703
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 157/339 (46%), Gaps = 48/339 (14%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 62
+ RFF + W+WP PV+L I+E L VW+P+ D++H MPIITPAYP M S++N
Sbjct: 275 LRRFFIIMHQWQWPAPVLLKPIEEGPLQVRVWNPKLYPSDRSHRMPIITPAYPSMCSTHN 334
Query: 63 VSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL 122
V+ ST ++M +F+ I ++V + A+WS LF+P+ FF YR YLQ+ + +AD L
Sbjct: 335 VTLSTQQIMTAEFKRAADIVDKVFVGSAKWSELFQPHDFFSKYRYYLQITASSGSADVQL 394
Query: 123 AWKGWVESRLRQLTLMIER-DTYGKLQCHPYPHEYVDTSKPCAH---------------- 165
W G VESR+RQL + +E DT L HP+ + D C +
Sbjct: 395 KWSGTVESRIRQLVMKLEYVDTL--LLAHPFVKSF-DRVNYCINEEEQRAVSIGEVPAAV 451
Query: 166 ------------------CAFFMGLQ--RKPGEVVQEG-QQFDIRGSVEEFKLSINMYMF 204
F++GLQ RKP +G ++ DI EF + M+
Sbjct: 452 DKRTEQDLIAGQGGTVYTTTFYIGLQIERKPAG--DKGPRKLDISYPTNEFTKLVKMWDS 509
Query: 205 WKP-GMEICVSHIRRKQIPPYVF----PEGYKRTRHPRLASQQRSSENGNEYQTGSGLKR 259
+ P M + V +I+ +P YV PE K R +++ + N + +
Sbjct: 510 YDPDSMGVIVRYIKSTALPAYVHAGREPEPPKTGGVKRAKTKKANGSNAATAASPALANA 569
Query: 260 KKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSG 298
D + + R S + + +P L P V +G
Sbjct: 570 ATDDSDAEHLNKKHRASSFVPENATPTPAGLPPVPVENG 608
>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 119/222 (53%), Gaps = 6/222 (2%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI---DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
L+ +FF V++ W WPNPV+L I E +LGF WDPR N D+ H MPIITPAYP N
Sbjct: 262 LLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFKNWDPRTNPGDRYHLMPIITPAYPQQN 321
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
S++NVS ST ++M D+F G E+V KA W LF P FF YR+Y+ + +
Sbjct: 322 STFNVSMSTRKIMCDEFFIGLKNTEDVISGKANWDRLFTPPNFFHKYRHYIVLSASSNTE 381
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--VDTSKPCAHCAFFMGLQRKP 176
++ L W G VES++R L +E + Y KL H P Y +D+ +F+GL +
Sbjct: 382 EEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPLDSEGEKHVTRWFIGLMFEK 440
Query: 177 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRR 218
E V ++I+ + M +K GM H+RR
Sbjct: 441 LENVNINLTYEIQMFKNKVHAQAVKIMMFKEGMVTEAKHVRR 482
>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 600
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 131/277 (47%), Gaps = 40/277 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I++ L VW+P+ D++H MPIITPAYP M S++
Sbjct: 276 IVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRSHRMPIITPAYPAMCSTH 335
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST +M ++F+ G I ++V + A WS LF + FF YR YLQV NAD
Sbjct: 336 NVTASTQIIMTEEFKRGADIVDKVIVGSATWSELFAKHDFFHKYRYYLQVIASTGNADLQ 395
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS--------------------- 160
+ W G VESR+RQL + +E + HP+ + S
Sbjct: 396 IKWSGTVESRIRQLVMKLEY-VDSLILAHPFIRGFEQVSYCLSEDEVRAVAEGEISDSVA 454
Query: 161 -------------KPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY-MFW 205
P F++GL +P G ++ DI +F + M+ +
Sbjct: 455 GRKKEDIEGKEGAGPVYSTTFYIGLAIEPKPTGATGPRRLDISYPTTDFTKLVKMWEKYD 514
Query: 206 KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 242
+ M I V HI+ +P VF G R P+L ++
Sbjct: 515 EATMGIVVRHIKSSGLPDNVFEPG---ERPPKLVQKR 548
>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
Length = 560
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 130/242 (53%), Gaps = 30/242 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA-------ELGFSVWDPRKNRRDKTHHMPIITPAY 54
L+ +FF V+T W WP+PV+L D+ VWDPR D+ H MPIITPA+
Sbjct: 75 LIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSFQELVWDPRTRSCDRYHLMPIITPAF 134
Query: 55 PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIV 114
P NS++NV+ ST +V+M++ + G I E+ KA+WS LF+ FF Y++++ + V
Sbjct: 135 PEQNSTFNVTKSTRQVIMNELEEGLAITIEILSGKAEWSKLFDEVNFFSRYKHFIVLLCV 194
Query: 115 AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---------KPCAH 165
AAN +D L W G VES++R L +ER+ L CH P + S PC
Sbjct: 195 AANENDQLVWSGLVESKIRHLIGNLERNPCVSL-CHINPQHFTPISPLPIEISIENPCCQ 253
Query: 166 CAFFMGLQ-----RKPGEVVQEGQQF-DIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 219
+F+G++ +K ++ E QQF D +F+ N+Y PGM + S++RR
Sbjct: 254 -MWFIGMELNKQLKKNIDLTDEIQQFNDAVMRAADFQ---NVYC---PGMAVLPSYVRRA 306
Query: 220 QI 221
+
Sbjct: 307 DL 308
>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Anolis carolinensis]
Length = 678
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 136/260 (52%), Gaps = 14/260 (5%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 62
V+R + ++ WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+YN
Sbjct: 230 VNRCYSSFSFREWPNPVLLKEPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYN 289
Query: 63 VSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL 122
VSTST +M+++F++G + +E+ K+ W L EP FF+ Y++Y+ + ++ + L
Sbjct: 290 VSTSTRAIMVEEFKHGLVVADEIFQGKSDWPKLLEPPNFFQKYKHYIVLTASSSTEEHHL 349
Query: 123 AWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP--- 176
W G VES++R L +ER+ T + +P + +F+G+ K
Sbjct: 350 EWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNRTQPKESDYVSLWFLGIIFKKAEN 409
Query: 177 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT--- 233
E V +DI+ + N K GM+I +H+++KQ+ Y+ + ++
Sbjct: 410 AESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHYYLPADLLQKRKKS 469
Query: 234 -----RHPRLASQQRSSENG 248
RH RL ++ S +N
Sbjct: 470 MPDVGRHTRLVLKRTSLDNS 489
>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
Length = 429
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 99/155 (63%), Gaps = 1/155 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L +ER+ + L H P +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSF 420
>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
Length = 465
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 99/155 (63%), Gaps = 1/155 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L +ER+ + L H P +
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSF 420
>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
Length = 689
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 159/311 (51%), Gaps = 28/311 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFS--VWDPRKNRRDKTHHMPIITPAYPCMNS 59
+V +FF V+ W WP PV+L +E LG + VW+P+ N D H MPIITPAYP NS
Sbjct: 258 IVLKFFFVFEKWNWPQPVLLRKAEEDVLGLNLQVWNPQVNPGDAHHLMPIITPAYPQQNS 317
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
++NV+ ST VM+++F+ G IC ++++ K W LFEP FF Y++Y+ + A ++D
Sbjct: 318 TFNVTKSTRDVMLNEFRRGLDICRDIDVGKLSWDILFEPIKFFSLYKHYIVICATAIDSD 377
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKL-QCHP--YPHEYVDTSKPCAHCAFFMGLQ--R 174
LL W G VES++R L +E + K+ +P YP D++ +H +F+GL+
Sbjct: 378 LLLKWSGLVESKIRILIGKLEDNENIKIAHVNPTSYPRIVPDSTD--SHLMWFIGLEFCV 435
Query: 175 KPGEV----VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 230
PG V E Q F I V+ L + + + G ++ V H RR+ + Y+ P+
Sbjct: 436 GPGGVNITLTYEIQMF-INSVVKSPALQSSPDL--RNGTQLDVKHARRRDLSDYLSPDIV 492
Query: 231 KRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHL 290
P L +++ E + LKR E V++ KR I PD L
Sbjct: 493 -----PPLPKKKKQFPIDIETPSPI-LKRVHKIERVEEPRVSKRIKIMDD------PDSL 540
Query: 291 APSSVRSGTGS 301
SS+ G +
Sbjct: 541 TDSSIGGGEAT 551
>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
Length = 657
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 124/221 (56%), Gaps = 12/221 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
L+ +FF +++ W WP PV+L + DE +L +VWDPR N D+ H MPIITPAYP NS+
Sbjct: 267 LLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVWDPRVNVSDRFHLMPIITPAYPQQNST 326
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNVS ST ++MMD+F+ + V NK +W +LF+P FF+ Y++Y+ + + D
Sbjct: 327 YNVSNSTRQIMMDEFKEALVVANNVYANKDEWGSLFQPSDFFQKYKHYIVLVARSDTEDH 386
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---VDTSKPCAHCAFFMGLQRKPG 177
L W G VES++R L +E++ + + H P + D P +F+GL K G
Sbjct: 387 QLEWVGLVESKIRILVGNLEKNPFICI-AHVNPKSFGPNEDDESPYI-AKWFVGLIFKTG 444
Query: 178 EVVQEGQQFDIRGSVEEF---KLSINMYMFWKPGMEICVSH 215
+DI+ ++ L+IN+ K GME+ V H
Sbjct: 445 TQTNIDLTYDIQNFMDIVYRQALTINLL---KKGMEVEVKH 482
>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
Length = 628
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 138/292 (47%), Gaps = 42/292 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I+E L VW+P+ D++H MPIITPAYP M +++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPAYPAMCATH 315
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST +M ++F+ G I ++V + A WS LF + FF YR YLQ I+A+ D
Sbjct: 316 NVTASTQMIMTEEFKKGADIVDKVIVGTATWSELFAKHDFFHKYRYYLQ--IIASTGDPA 373
Query: 122 L--AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
L W G VESRLRQL + +E +L HP+ + S + Q + E
Sbjct: 374 LQIKWAGTVESRLRQLVMKLEFVESLQL-AHPFIKGFEQISYCLSEEEMRAVAQGEVSEA 432
Query: 180 VQEGQQFDIR------------------------GSVEEFKLSIN--------MYMFW-- 205
V + ++ DI GSV KL I+ M W
Sbjct: 433 VAQRKKEDIEGKEGASQVYTSTFYIGLAIEARQAGSVGPRKLDISWPTTEFTKMVKSWDK 492
Query: 206 --KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGS 255
+ M I V HI+ +P YVF G +R P L ++ S G GS
Sbjct: 493 FDETKMGIIVRHIKSSTLPDYVFDAG-ERQPKPALTKKRPKSVKGTTRPNGS 543
>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
Length = 474
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 118/213 (55%), Gaps = 13/213 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQR 384
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E +T K + +GL K
Sbjct: 385 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSE--NTEKEEFRTMWVIGLVFKK 442
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMF 204
E E D+ ++ F + +IN MF
Sbjct: 443 ME-NSENLSVDLTYDIQSFTDTVYRQAINSKMF 474
>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
Length = 595
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 150/342 (43%), Gaps = 63/342 (18%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M S++
Sbjct: 260 IVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRAHRMPIITPAYPSMCSTH 319
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST +M ++F+ G I + V + AQWS LF + FF YR YLQ+ + D
Sbjct: 320 NVTASTQMIMTEEFKRGADIVDRVIVGTAQWSELFAKHDFFHKYRYYLQIIASTGDPDLQ 379
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--------------------------- 154
W G VESR+RQL + +E + HP+
Sbjct: 380 NKWSGTVESRIRQLVMKLEY-VESLILAHPFIKGFDQVSYCLNEDEVKAVVQGEISEAIA 438
Query: 155 -------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY-MFW 205
E + S+ F++GL +P G ++ DI ++F + M+ +
Sbjct: 439 SRKKEDIEGKEGSQTVYTTTFYIGLAIQPKPAGAVGPRRLDISYPTQDFSKLVKMWDKYD 498
Query: 206 KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPES 265
+ M I V HI+ +P VF G + P +Q+R K +
Sbjct: 499 ESKMGIIVRHIKSSALPDNVFDPGER----PAKVTQKRV---------------KGKSSN 539
Query: 266 VDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVI 307
+ + P KRQ S D++ P +GT + PV+
Sbjct: 540 ISSEQPNKRQRSSTSVADTIRPTE-------NGTSTGTTPVV 574
>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
Length = 667
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 139/311 (44%), Gaps = 59/311 (18%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W+WP PV+L I++ L VW+P+ D+ H MPIITPAYP M +++
Sbjct: 268 IVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATH 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM +F+ + + V + K W LF + FF Y+ YLQV + +AD
Sbjct: 328 NVSQSTQMVMTSEFKRAAEVVDRVIIGKTNWDELFAKHDFFFKYKYYLQVIASSGSADLQ 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQC-HPY------------------------PHEY 156
L W G VES++RQL + +E + C HP+ P E
Sbjct: 388 LKWHGTVESKIRQLVMKLE--LVPTITCAHPFIKGFDQVSECWNDHEVRLVATGDIPEEV 445
Query: 157 VDTSKPCAH------------------------------CAFFMGLQRKPGEVVQEGQQF 186
++ A F++GL +P + ++
Sbjct: 446 AQRTQKVAALPETDEAKQAAAEEAARVTEGKEGHRMIYTTTFYIGLSIEPKLAGEGPRKL 505
Query: 187 DIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS-QQRS 244
DI EF + + + + M I V HI+ Q+P YVF G R ++ +
Sbjct: 506 DISYPTAEFTGKVKQWEQYDEASMGIVVRHIKWTQLPGYVFEGGENRVSAAAVSKVNGKR 565
Query: 245 SENGNEYQTGS 255
+++GN+ + GS
Sbjct: 566 AKSGNKKKNGS 576
>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
(Polynucleotide adenylyltransferase gamma) (SRP RNA
3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
[Ciona intestinalis]
Length = 833
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 9/239 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
LV RFF V++ W WP PV+L +E+ L VWDPR N D+ H MPIITPAYP NS+
Sbjct: 256 LVQRFFWVFSQWEWPRPVLLKQPEESNTLNLPVWDPRYNPSDRLHLMPIITPAYPQQNST 315
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNV+ S+L VM +F G + E+ NK+ W L E FF Y++++ + A + ++
Sbjct: 316 YNVTRSSLTVMKGEFIDGYRVTAEIHENKSSWLKLLETPNFFNEYKHFIVLMASAESQEN 375
Query: 121 LLAWKGWVESRLRQLTLMIERDTY---GKLQCHPYPHEYVDTSKPCAHC-AFFMGLQRKP 176
W G VES++R L +ER+ Y + YP E + A+ +F+GL R
Sbjct: 376 FNLWTGLVESKIRILVGYLERNDYILIAHINQTGYPQEVKEKDVTTAYVNRWFLGL-RFV 434
Query: 177 GEVVQEGQQF--DIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 233
+++ DI+ + + +K GM++ ++ RR Q+P Y+ PE T
Sbjct: 435 KDLISTNINLTHDIQAFTDTLHRQAHNSKVFKEGMKVEATYSRRSQLPKYL-PESIAAT 492
>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
Length = 601
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF++++MW WP P+ L +++ WDP+ N+ D+ H MPIITPAYP N+S
Sbjct: 253 LVIKFFKIFSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQSDRCHLMPIITPAYPQQNTSV 312
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS STL ++ ++ G+ IC+E+E KA+WS LFE FF+ Y++Y ++ +
Sbjct: 313 NVSRSTLAILNEEIHRGHAICQEIEQKKAKWSELFEQTDFFQKYQHYAVLEASYTTEEKC 372
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L +ER+ L H +PH +
Sbjct: 373 LEWVGLVESKIRLLVSTLERNELVSL-AHVHPHAF 406
>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 620
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++SRFF + W WP P++L AI++ L VW+P+ D+TH MPIITPAYP M +++
Sbjct: 257 ILSRFFHIIGQWAWPQPILLKAIEDGPLNVRVWNPQIYPSDRTHLMPIITPAYPSMCATH 316
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST+++M ++ + G+ I E++ W+ LFE + FF YR YLQ+ I + N +
Sbjct: 317 NVTHSTMKIMQNELRRGSQIVEKIIQAGEPWANLFEKHDFFHMYRYYLQIIITSGNQEMY 376
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYP---------------------------- 153
W G VES++R L +E ++ HP+
Sbjct: 377 HKWAGTVESKIRLLVGKLELQEAVEI-AHPFTKGLDQVVCCLNDDEVRAVAKYEMDDEVL 435
Query: 154 ------HEYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY-MFW 205
HE D F++GL +P Q G ++ DI EF ++ ++ ++
Sbjct: 436 KRSETEHEGKDGVSKVFMKTFYIGLGVEPKPAGQTGPRKLDISYPTIEFVKTVKLWDLYE 495
Query: 206 KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLK--RKKDP 263
+ M I + +++ +P F G ++ + + +S + G G K + P
Sbjct: 496 EEQMGIVIRYVKHSALPDNCFEGGVRQALAGKGVKRTKS-------KAGDGKKPLSRTSP 548
Query: 264 ESVDQD-GPEKRQSISPQKQDSLSPDH 289
V D P K+ Q++DSL+ DH
Sbjct: 549 HDVSGDYSPHKK-----QRKDSLTGDH 570
>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
Length = 500
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 119/202 (58%), Gaps = 12/202 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDE--AELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
L+S+FF + T W WP+PVML A+++ A W+P+ N D++H MP+ITP+YP M +
Sbjct: 233 LISKFFHILTSWSWPSPVMLKAVEDGPAFANTKPWNPKLNPTDRSHRMPVITPSYPSMCT 292
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
++NV+ ST R++ + + I +++ A+W LFE + FF+ YR YLQ+ +VA N +
Sbjct: 293 THNVTQSTQRIITGEIKQAAKIVDKIMAGSAKWPQLFEAHSFFKMYRQYLQITVVADNYE 352
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
L W G VE+RLRQL + +E + +Q HP+ + +T C + +
Sbjct: 353 LQLKWTGLVEARLRQLVIKLEA-IHSVMQVHPFMDGFSET------CLYRTSTDK---VT 402
Query: 180 VQEGQQFDIRGSVEEFKLSINM 201
V +G+++D ++ + K+ +++
Sbjct: 403 VSQGEKYDNNRTIGKMKMEVDV 424
>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
Length = 539
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 9/237 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLC-AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
L+ +FF +Y +W WPNP+ + I+ +LGF W+P+ +D+ H MPIITP YP +NSS
Sbjct: 253 LLIKFFHLYHLWNWPNPLSITPCINPLQLGFPSWNPKVYPKDRLHLMPIITPCYPSINSS 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
YNV +STL VM +F+ + V WS L FF+ YR++LQV I + + +D
Sbjct: 313 YNVMSSTLDVMKTEFKNASLQVSNVRAKVLSWSELLTEASFFDKYRHFLQVQISSEDEED 372
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA-FFMGLQ-RKPGE 178
W WVESRLR + +E + +++ P+ + A+ + FF+ L ++P +
Sbjct: 373 FGRWVTWVESRLRTFFIRLEAIPFVRIR--PFARFFNFQELKGAYISWFFVALDFQRPED 430
Query: 179 VVQEGQQ----FDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
Q Q+ D +V F ++ + M++ V H+ R QIP +V Y+
Sbjct: 431 KRQNAQEPELTIDFSDAVRAFANHVDQWEERNSTMDLEVKHVVRSQIPAWVIDATYR 487
>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
Length = 512
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 131/250 (52%), Gaps = 22/250 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ +FFRVY W W PVMLC I E + F VWDPR N D+ H MP+ITPA+P
Sbjct: 262 LIQKFFRVYAQWNWKCPVMLCKIKEVPNIPGYMSFKVWDPRNNPTDRQHLMPVITPAFPS 321
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ----WSALFEPYLFFESYRNYLQVD 112
MNS++N++ +T R++ D+F+ N + +V AQ W + E F S++++L ++
Sbjct: 322 MNSTHNITLTTKRILTDEFKRANDLL-KVNAKGAQMKNIWERVLEKEDMFASHKHFLVIE 380
Query: 113 IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--EYVDTSKPCAHCAFFM 170
++A W+GW+ SR+R L IE T + P+P +Y A C FF
Sbjct: 381 VLATTEHVHGKWEGWIGSRMRFLIKKIE--TVPNILVRPWPEFFKYEHKEWDYASCVFFG 438
Query: 171 GLQRKPGEVVQEGQ----QFDIRGSVEEFKLSINMYM---FWKPGMEICVSHIRRKQIPP 223
++P + FD+R S++ FK IN + +K + + + +++ Q+P
Sbjct: 439 FKCKEPDNKTNSAEPANKTFDMRMSIKGFKEIINSWTEMEAYKDQIAVNIRYLKNSQLPH 498
Query: 224 YVFPEGYKRT 233
+V P KRT
Sbjct: 499 FVNPRR-KRT 507
>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 91/140 (65%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLV FF+++ W+W PVML I + G VWD R N+ ++ M IITPAYP NS+
Sbjct: 242 MLVYSFFQLWDAWQWSTPVMLTPIVDEGHGLRVWDERVNKAERFQLMKIITPAYPAQNST 301
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+NV+ STL V+ ++F+ G +C EV ++K +W +L+EP FF +++YLQV I A + DD
Sbjct: 302 FNVTHSTLHVLKNEFKRGREVCAEVLMSKKRWESLWEPLPFFTMHKHYLQVTIAAVSEDD 361
Query: 121 LLAWKGWVESRLRQLTLMIE 140
W+GWV SRLR L +E
Sbjct: 362 FKKWEGWVHSRLRMLVQGVE 381
>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
Length = 590
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 134/259 (51%), Gaps = 24/259 (9%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + + G I E++ L + +WS LF + FF + Y+ YL + + + +
Sbjct: 319 HNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNITASSTSKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-------------------DTS 160
W G VE++LR L + +++ ++ HP+P +V +++
Sbjct: 379 AQSVWSGLVEAKLRHLVIALDKKASIEV-AHPFPKAHVAALESANGSINMPGLGQTEESN 437
Query: 161 KPCAH-CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRR 218
H +++GL+ KP V + DI FK + ++PG+ ++ ++H+R
Sbjct: 438 NHTLHTTTYYIGLELKP-LVPGASRSLDISSETHMFKNMCTSWAQYQPGINDLTITHVRN 496
Query: 219 KQIPPYVFPEGYKRTRHPR 237
+P VF G R P+
Sbjct: 497 YDLPEDVFHPGETRPVRPK 515
>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
Length = 629
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 120/240 (50%), Gaps = 24/240 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAEL------GFSVWDPRKNRRDKTHHMPIITPAYP 55
L+ FF + W WP+PVML + VWDPR+N RDK H MPIITP YP
Sbjct: 346 LLHLFFETFANWNWPDPVMLTPEASRHVPPRNVDARPVWDPRENYRDKLHVMPIITPCYP 405
Query: 56 CMNSSYNVSTSTLRVMMDQFQYGNTICEEV-------ELNKAQWSALFEPYLFFESYRNY 108
MNSS+NV LR M D+F+ + E+ E K WS+LFE FF + Y
Sbjct: 406 SMNSSFNVGEPGLRRMRDEFRRAARVSREILSGTATGEDGKKGWSSLFERSGFFGQHGAY 465
Query: 109 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 168
L+VD+ A D+ L W G E+R+R L +E D +++ +P+ Y +K +F
Sbjct: 466 LRVDVAATTEDEFLRWFGLCEARMRLLIAGLESD---EIRAYPFARFYRRDTKEEYVSSF 522
Query: 169 FMGLQRKPGEVVQEGQQFDIRGS--VEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVF 226
F+ L+ G D+R V E+ +N + GM++ + ++R +P +VF
Sbjct: 523 FVALR------FASGVDRDVRWGERVSEYLHVVNSFEGRTAGMDLRLELLKRADLPRFVF 576
>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
Length = 511
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 125/233 (53%), Gaps = 11/233 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ +FF+V++MW W PV LC I + F VWDP + +D+ H MPIITPA+P
Sbjct: 262 LIEKFFKVFSMWNWIYPVTLCKIKRESGVPGLMSFKVWDPTNSLQDRQHLMPIITPAFPS 321
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVDIVA 115
MNS++NV+ +T RV+ ++ + + L Q W + E F Y+++L +++
Sbjct: 322 MNSTHNVTATTKRVVTEELSRAAQLLKTPNLTNTQLWEMVLEEEDVFSKYKHFLVIEVYG 381
Query: 116 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 175
++ W+GW+ SR+R L +E Y +++ P ++ D A AFF
Sbjct: 382 SSEHAHNKWEGWIGSRMRFLIKKLETLEYTQIRPLPGFFKFEDRDWEYASSAFFAFKHTA 441
Query: 176 PGEVVQEGQQFDIRGSVEEFKLSINMYM---FWKPGMEICVSHIRRKQIPPYV 225
P VV+ Q FDIR ++ FK IN + +K +++ + +++ KQ+P Y+
Sbjct: 442 P--VVEGYQSFDIRMPIQSFKEIINTWCDMETFKDQIDVNIRYLKSKQLPDYI 492
>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
Length = 556
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 98/160 (61%), Gaps = 2/160 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +YT W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD- 119
+N+++ST +V+M + G + ++ L K+ WSAL E + FF Y+ YL + ++D
Sbjct: 313 HNITSSTQKVIMSELARGAEVMNQINLGKSSWSALLERHDFFHKYKFYLCIVAATTSSDE 372
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 159
+ L W G VES+LR L L +E T G HPY ++ D+
Sbjct: 373 EHLKWSGLVESKLRHLVLKLEV-TDGIELAHPYVKDFSDS 411
>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Nasonia vitripennis]
Length = 383
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 128/246 (52%), Gaps = 7/246 (2%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK--THHMPIITPAYPCMNS 59
L+ +FF ++++W WP PV+L ++ + LG VWDPR N D+ H MPIITPAYP NS
Sbjct: 139 LIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNASDRPPYHLMPIITPAYPQQNS 198
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
++NV+ ST +M + + I +++ + KA W LFEP FF+ ++++ + +
Sbjct: 199 TFNVTISTRTIMEEAIKTVLAITKDIAMGKASWDKLFEPSNFFDEXKHFVILSASSLTNK 258
Query: 120 DLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
+ W G++ES++R L +R+ T+ + +P + + C + +GL +
Sbjct: 259 MSIEWSGFIESKIRHLIGSFDRNPNITFAHINPKSFPP--LKPEEDEHGCMWLIGLTFRK 316
Query: 177 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHP 236
E + DI+ ++ + + +K GM ++RRK + Y+ KR R
Sbjct: 317 AEKLSIDLTSDIKSFIKTTEGQVKKSNLFKDGMSQEAKYVRRKNLSNYIAANQIKRGRKT 376
Query: 237 RLASQQ 242
++QQ
Sbjct: 377 SSSTQQ 382
>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
Length = 618
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 35/259 (13%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++SRFF ++ +W+WP PV+L + + L VW+P N D+ H MP+ITPAYP M S++
Sbjct: 255 ILSRFFHIFLLWQWPEPVLLTPLKQGPLNVRVWNPHVNSADRMHKMPVITPAYPSMCSTH 314
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
N+S S++ V+ +++ G I + + + W+ LFEP FF YR YLQ+ + + D+
Sbjct: 315 NISHSSMAVIKAEWERGENIVNRIAVGQTTWAELFEPTDFFYKYRYYLQITASSQDMDNQ 374
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT--------SKPCAHCA------ 167
L W G VES+LR L +E G H Y E+ T K A A
Sbjct: 375 LKWSGTVESKLRTLGANLE-GAEGVTLAHIYVDEFEKTYSCKTEEEVKLVASGASTPEIS 433
Query: 168 --------------------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKP 207
F++GL G ++ D+ EF + + + P
Sbjct: 434 ARTEDDIKDVEGAVKLHTSNFYIGLSIDLGPKGSGSKKLDLSYPTCEFTKLVKRWEKYTP 493
Query: 208 GMEICVSHIRRKQIPPYVF 226
M I V +++ +P +VF
Sbjct: 494 EMGITVRYMKNIALPDFVF 512
>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
Length = 605
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 46/301 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V++ W+WP PV+L + + LGF VWDPR D+T
Sbjct: 273 LIEKFFLVFSQWKWPQPVLLKSPENVNLGFQVWDPRVTMSDRT----------------- 315
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
+M + F+ G I EE+ + KA W LFEP FF YR+Y+ + ++ A+D
Sbjct: 316 --------IMQEAFETGLAITEEIIMGKASWDKLFEPPNFFGKYRHYIVLLASSSTAEDQ 367
Query: 122 LAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGE 178
L W G VES++R L +ER+ T + +P + K + +F+GL K GE
Sbjct: 368 LEWCGLVESKIRHLIGTLERNPNITLAHINPESFPPLKPEAGKHVS--MWFIGLTFKKGE 425
Query: 179 VVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRL 238
+ DI+ VE + +K GM I H++RK + Y+ KR R
Sbjct: 426 NLNIDLTMDIKSFVETTERQAEQIKLFKNGMTIEAKHVKRKDLSNYIAANQIKRERKTSS 485
Query: 239 ASQQRSSENGN-----EYQTGSGLKRKKDPESVDQDGPEKR-----------QSISPQKQ 282
++Q+ + +GN Q L+++K +S++ + +++ QS + QK+
Sbjct: 486 STQRNGNSSGNGGVSPRNQGDQTLRKRKSDQSLESNDKKRKIQDSEQQHQHPQSTTQQKE 545
Query: 283 D 283
D
Sbjct: 546 D 546
>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
Length = 649
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 111/214 (51%), Gaps = 45/214 (21%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ +FFRVY++W W PV++ I++ FSVWDP KN +DK H MPIITPA+PC
Sbjct: 342 LIGKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVMPIITPAFPC 401
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELN---------------------------- 88
MNS++NV+ T +++D+F+ + I +E N
Sbjct: 402 MNSTHNVTYCTRSILIDEFKRAHYIINYMEANPGANVTFVMNQANGIVTPVSAPTTSSST 461
Query: 89 ---------KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMI 139
+ W+ + +P F SY+++L + I+A N +WKGW+ES++R L +
Sbjct: 462 TGSGSIPGSGSMWTNILQPLDLFASYKHFLHIQIMATNELIYNSWKGWIESKIRLLFKKL 521
Query: 140 ERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 172
E T +L+ PYP YV +C +FF+GL
Sbjct: 522 E--TINELKIRPYPKFYVYKKDKFYYCSSFFIGL 553
>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 323
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 130/237 (54%), Gaps = 15/237 (6%)
Query: 15 WPNPVMLCAI---DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVM 71
WP PV+L ++ ++ L F VWDPR N D H MPIITP YP N+++ V+ S+ +M
Sbjct: 3 WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62
Query: 72 MDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESR 131
++ + G I ++ + +W ALFEP FF+ Y++YL + + D L W G+ ES+
Sbjct: 63 TEELKDGFEIVSKIYEGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHGYAESK 122
Query: 132 LRQLTLMIERDTYGKL-QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQF-DIR 189
LR L +ER+ KL HP P ++ S C +F+GL V E Q F D+
Sbjct: 123 LRLLIGNLERNPCIKLAHVHPSPLGPLNESDDEHLCRWFIGLTF----VKIENQNFVDLT 178
Query: 190 GSVEEFKLSINMYMF----WKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 242
++ F +++ + K GM++ + H++R+Q+ YV PE +++ R+A+ Q
Sbjct: 179 FDIQSFTNTVHKQAYHINLMKDGMKVKIKHVKRRQLGLYVPPEILLQSK--RVAAAQ 233
>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
Length = 558
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 102/161 (63%), Gaps = 6/161 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FF +YT W WP PV+L +I++ L VW+PR D+ H MP+ITPAYP M +++
Sbjct: 254 IVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATH 313
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---NA 118
N+++ST +V++ + G++I +E+ K WS LFE + FF Y+ YL V VAA +A
Sbjct: 314 NITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSFFYKYKFYLCV--VAASIDSA 371
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 159
++ W G++ES+LRQL L +E G HPY ++ +T
Sbjct: 372 EEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSNT 411
>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
Length = 558
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 102/161 (63%), Gaps = 6/161 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FF +YT W WP PV+L +I++ L VW+PR D+ H MP+ITPAYP M +++
Sbjct: 254 IVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATH 313
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---NA 118
N+++ST +V++ + G++I +E+ K WS LFE + FF Y+ YL V VAA +A
Sbjct: 314 NITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSFFYKYKFYLCV--VAASIDSA 371
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 159
++ W G++ES+LRQL L +E G HPY ++ +T
Sbjct: 372 EEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSNT 411
>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
Length = 518
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 98/159 (61%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++SRFF V WRWP PV+L I++ L VW+PR +DK H MPIITPAYP M ++
Sbjct: 252 VILSRFFNVLLRWRWPQPVLLKKIEDGPLQARVWNPRIYSQDKLHRMPIITPAYPSMCAT 311
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAAN--- 117
+N++ ST +V++ + + G I E+ L + WSALFE + FF Y+ YL IVAA+
Sbjct: 312 HNITASTQKVILRELERGGQILNEIMLGQKPWSALFEKHHFFSDYKYYLS--IVAASKGT 369
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
A+ L W G+VES+LR L +E +L HPY +
Sbjct: 370 AEQQLKWSGFVESKLRHLVQKLELLDSIEL-AHPYVKTF 407
>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 98/160 (61%), Gaps = 2/160 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +YT W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYANDRLHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL-QVDIVAANAD 119
+N+++ST +V++ + + G + ++ L K WS LF+ + FF Y+ YL V A+ +
Sbjct: 313 HNITSSTQKVILSELEKGAEVVRQINLGKKSWSDLFDRHDFFHHYKFYLCVVAATVASDE 372
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 159
+ L W G +ES+LR L L +E T G HPY ++ D+
Sbjct: 373 EHLKWTGLIESKLRHLVLKLEV-TEGVELAHPYVKDFSDS 411
>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
Length = 527
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W+WP PV+L I++ L VW+PR D+ H MPIITPAYP M +++
Sbjct: 256 IVSRFFIILLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPTDRLHRMPIITPAYPSMCATH 315
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST VM ++F+ G+ + + + K W+ LFE FF Y+ YLQV + +AD
Sbjct: 316 NVTQSTQMVMTEEFRRGSEVVDRIFRGKTSWNELFEKNDFFHKYKYYLQVIASSGSADLQ 375
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W+G VESRLRQL + +E L HP+
Sbjct: 376 LKWQGTVESRLRQLIMKLEL-VPALLCAHPF 405
>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
putative [Candida dubliniensis CD36]
gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
Length = 558
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 102/162 (62%), Gaps = 6/162 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +YT W WP PV+L +I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---N 117
+N+++ST +V++ + G++I +++ K WS LFE + FF Y+ YL V VAA +
Sbjct: 313 HNITSSTQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCV--VAATIDS 370
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 159
A++ W G++ES+LRQL L +E G HPY ++ T
Sbjct: 371 AEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSHT 411
>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
Length = 501
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 130/233 (55%), Gaps = 23/233 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDE-----AELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
++ +FF+VY +W W PV++ I + + F VWDP+ N +D+ H MPIITPA+P
Sbjct: 262 IIHKFFKVYMLWNWKYPVVINKIKQPVNVPGLMMFKVWDPKTNPQDRLHLMPIITPAFPA 321
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
MNS++NV+ +T RVM+++F+ + + + ++ W+ L EP F ++++L + +VA+
Sbjct: 322 MNSTHNVTNTTKRVMINEFKRAHELLKTQ--SQMTWNDLLEPANIFNEFKHFLVIIVVAS 379
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF-FMGLQRK 175
+ W GW+ESR+R L +E + +L+ P+PH + + F+GL
Sbjct: 380 DEKAHSKWHGWIESRIRFLIRKLEAIEHTELR--PWPHSITMEDPDWTNSKWIFIGLSYN 437
Query: 176 PGEVVQEGQQFDIRGSVEEFKLSINMYMFWK------PGMEICVSHIRRKQIP 222
E QFDIR ++EFK N+ W+ +++ + ++++ Q+P
Sbjct: 438 K----TEESQFDIRTPIKEFK---NLIFSWQELTSYESKVDVRIEYMKKSQLP 483
>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
Length = 507
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 128/243 (52%), Gaps = 16/243 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDE-----AELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ +FFRVY++W+W PV LC I E + F VWDPR N +D+ H MPIITPA+P
Sbjct: 262 LIEKFFRVYSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLMPIITPAFPS 321
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVDIVA 115
MNS++NV+ +T RV+ ++ I + L + W + E F +Y+++L +++
Sbjct: 322 MNSTHNVTATTKRVITEELMRALEIFKTSNLTNVELWEKVLEEEDVFSNYKHFLVIEVYG 381
Query: 116 ANADDLL-AWKGWVESRLRQLTLMIERDTYGKLQCHPYP--HEYVDTSKPCAHCAFFMGL 172
+N W+GW+ SR+R L +E G P P ++ D + A AFF
Sbjct: 382 SNEHVAHNKWEGWIGSRMRFLISRLE--NLGNTYIRPIPGFFKFEDDNWDYASSAFF-AF 438
Query: 173 QRKPGEVVQEGQQFDIRGSVEEFKLSINMYM---FWKPGMEICVSHIRRKQIPPYVFPEG 229
+ G VV+ + DIR SV+ FK IN + ++ + + H++ Q+P YV
Sbjct: 439 KVISG-VVETSKTLDIRSSVQSFKDIINNWSDMEKYRDQISFNIKHLKNNQLPDYVLSNK 497
Query: 230 YKR 232
K+
Sbjct: 498 SKK 500
>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 40/315 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
+V +FF +Y W WP PV+L ID + SVW+P+ +RRD+ H MP+ITPAYP M S
Sbjct: 258 IVGKFFPIYYQWNWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCS 317
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEV-ELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
++N+++ST+ ++ + I +E+ + + W LFE FF Y+ Y+QV A+ +
Sbjct: 318 THNITSSTMSIIRKEMLRAMQITDEILKTPGSSWIPLFEKVDFFSMYKTYVQVVASASTS 377
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP------------------------YPH 154
D + W G VESR+R L +E +T + HP
Sbjct: 378 DGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRVFYCLTEEEQAAASQGELTA 436
Query: 155 EYVDTS---------KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMF 204
E +D + + +FF+GL+ + G+ ++ ++F + N +
Sbjct: 437 EMIDRTEEDVEGKEHRKIYTKSFFIGLEIEKKSKESGGRVLNLFYPSKKFCAVCQNWDKY 496
Query: 205 WKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENG--NEYQTGSGLKRKKD 262
+ M + + +R ++PPYVFP+G +++ QQ SE+ N+ G G ++
Sbjct: 497 NEMEMSVILRPAKRSELPPYVFPDGMPKSKKKTKRQQQNGSEDAGMNDGSEGQGPSKRTK 556
Query: 263 PESVDQDGPEKRQSI 277
E + E +Q +
Sbjct: 557 SEQTSFNNSELQQQL 571
>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
Length = 649
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 140/307 (45%), Gaps = 39/307 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V RFF + W WP PV+L +D+ ++G W+P+ D+ H MP+ITP YP M +++
Sbjct: 258 VVGRFFPIMHQWPWPAPVILKHVDDLQMGQRSWNPKLFPGDRAHRMPVITPVYPAMCATH 317
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST ++ ++ + G + + L ++WS LFE + FF YR +LQ+ A+A+
Sbjct: 318 NVSVSTFAIIEEELRRGTKLMNSIILGSSKWSELFEKHDFFHKYRYFLQIIASTASAEAQ 377
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--------------------------- 154
L W VE+++RQL +E L HP+
Sbjct: 378 LMWAPNVEAKIRQLVSKLELVESLTL-AHPFTKGFEQVFYCMNDDEIRSVAQGEVPDVIA 436
Query: 155 -------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSINMY-MFW 205
E V++ F++GL +P V G ++ DI EF M+ F
Sbjct: 437 RRRPQDIEGVESGSKVYSTTFYIGLAIEPRPVGAIGTRRLDISYPTTEFTKVAKMWERFD 496
Query: 206 KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSE--NGNEYQTGSGLKRKKDP 263
+ M + V HI+ +P YVF G ++ R + + RSS N N Y T L +
Sbjct: 497 EATMGLVVRHIKSSALPDYVFEPGERQPRSAQKRVKVRSSYPVNENSYPTNGELSYATNG 556
Query: 264 ESVDQDG 270
E +G
Sbjct: 557 ERSYTNG 563
>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
Length = 859
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 28/264 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLC------AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYP 55
LV +FF +YT W WP+PV+L A D L VWDPR D+ H MPI+TPA+P
Sbjct: 401 LVQKFFLLYTKWEWPHPVVLKETEVSHARDMPALQELVWDPRSRSGDRFHLMPIVTPAFP 460
Query: 56 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVA 115
NS++NV+ S+L+++M++ + G ++ KA+WSALFE FF Y+++L + ++
Sbjct: 461 QQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKAEWSALFEEVNFFSRYKHFLALLCLS 520
Query: 116 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--------VDTSKPCAHC- 166
A D L W G VES++R L +ER ++ CH + Y V S C
Sbjct: 521 ATEQDELVWCGLVESKIRFLIASLERRESIRV-CHVHTKYYQPRNDPLPVQVSLQNPRCR 579
Query: 167 AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEICVSHIRRKQIP 222
+F+GL ++ DI+ V+ F +N + GM + ++R+ ++
Sbjct: 580 LWFIGLDLNK----TVSRKIDIQHEVQSFMDLLNSMATTQNIYVEGMSVIPHYLRKAELV 635
Query: 223 PYV----FPEGYKRTRHPRLASQQ 242
++ +G K + R+A+ Q
Sbjct: 636 KWLKMEDLTKGRKAPKRRRIAASQ 659
>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
Length = 523
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 9/240 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ +FFRVY++W W PV LC I + + F VWDP+ N D+ H MPIITPA+P
Sbjct: 262 LIEKFFRVYSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDPQNNPHDRQHLMPIITPAFPS 321
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-FFESYRNYLQVDIVA 115
MNS++NV+ +T RVM D+ + I + K Q L F SY+++L +++
Sbjct: 322 MNSTHNVTATTKRVMTDELKRARDILKSPNTPKNQLLELVLEEEDIFSSYKHFLIIEVYG 381
Query: 116 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 175
A+ W+GW+ SR+R L +E +++ P ++ D+ A AFF
Sbjct: 382 ASEHAHGKWEGWIGSRMRFLIKKLENLPNTQIRPLPGFFKFEDSEWEYASSAFFALKCLS 441
Query: 176 PGEVVQEGQQFDIRGSVEEFKLSINMYM---FWKPGMEICVSHIRRKQIPPYVFPEGYKR 232
+ Q + DIR S++ FK IN + K +++ + H++ Q+P YV + K+
Sbjct: 442 NDKSGQGSKVLDIRSSIQSFKDIINGWTDMENLKDQIKVNIRHVKSSQLPDYVQAKNSKK 501
>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 513
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 125/230 (54%), Gaps = 14/230 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H PIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLXPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST V +++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRXVXVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++R L +E++ + L Q P P E D + + +GL K
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FRTXWVIGLVFKK 445
Query: 177 GEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 221
E E D+ ++ F + +IN F + +I H++RKQ+
Sbjct: 446 TE-NSENLSVDLTYDIQSFTDTVYRQAINSKXF-EVDXKIAAXHVKRKQL 493
>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
Length = 658
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W+WP PV+L I++ L VW+P+ D+ H MPIITPAYP M +++
Sbjct: 268 IVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATH 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM +F+ + + V + K WS LF + FF Y+ YLQV + +AD
Sbjct: 328 NVSQSTQMVMTSEFKRAAEVVDRVIIGKTHWSELFAKHDFFFKYKYYLQVIASSGSADLQ 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQC-HPY 152
L W G VES++RQL + +E + C HP+
Sbjct: 388 LKWHGTVESKIRQLVMKLE--LVPTITCAHPF 417
>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
Length = 554
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 117/204 (57%), Gaps = 12/204 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ + F +++ W WP PV+L I D A+L VWDPR+N D+ H MPIITPA+P
Sbjct: 261 LIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITPAFPQ 320
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NVS S+++V+ D+ + IC+++ +W L E FF Y +++ + + A
Sbjct: 321 QNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFFSKYHHFIALKLKAE 380
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
+ + LA+ G+ ESR+RQL ++E++ ++ P ++ D P +F+GL
Sbjct: 381 SVKEELAFGGFFESRIRQLVQILEKNQVIQV-AQINPRKFKDVKDP-KKSIWFIGL---- 434
Query: 177 GEVVQEGQQFDIRGSVEEFKLSIN 200
E V + D+ +++FK++I+
Sbjct: 435 -EFVANVKNVDLTSDIQQFKMNID 457
>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
knowlesi strain H]
gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
[Plasmodium knowlesi strain H]
Length = 637
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 38/207 (18%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAID-----EAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ +FFRVY++W W PV++ I+ + FSVWDP KN +DK H MPIITPA+PC
Sbjct: 339 LICKFFRVYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPEKNIKDKLHVMPIITPAFPC 398
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ------------------------- 91
MNS++NV+ T +++D+F+ + I +E+N
Sbjct: 399 MNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGVVTPVSAPSSSTTS 458
Query: 92 -----WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGK 146
W+ + +P F +Y+++L + I+A + +WKGW+ES++R L +E T +
Sbjct: 459 SSSNIWTNILQPLDLFGTYKHFLHIQIMATSELIYNSWKGWIESKIRLLFKKLE--TINE 516
Query: 147 LQCHPYPHEYVDTSKPCAHC-AFFMGL 172
L+ PYP YV +C +FF+ L
Sbjct: 517 LKIRPYPKFYVYQKDKFDYCSSFFIAL 543
>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
Length = 631
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 89/145 (61%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 62
V +FF V+ W+WP PV L D LGF VWD R N +D+ H MPIITPAYP NS+++
Sbjct: 475 VHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMPIITPAYPQPNSTFH 534
Query: 63 VSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL 122
VS+ST +VM+++F G I +E+ L KA W LFE FF YR + + + + N DD L
Sbjct: 535 VSSSTRKVMLNEFNSGMQITDEIMLGKAGWDKLFEAPSFFFKYRYVIVLLVTSNNTDDHL 594
Query: 123 AWKGWVESRLRQLTLMIERDTYGKL 147
W VES++R L +ER + L
Sbjct: 595 EWCEMVESKIRYLIQNLERILHINL 619
>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
Length = 360
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 102/162 (62%), Gaps = 6/162 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +YT W WP PV+L +I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 55 VIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 114
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---N 117
+N+++ST +V++ + G++I +++ K WS LFE + FF Y+ YL V VAA +
Sbjct: 115 HNITSSTQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCV--VAATIDS 172
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 159
A++ W G++ES+LRQL L +E G HPY ++ T
Sbjct: 173 AEEHKKWSGFIESKLRQLVLKLEVAE-GVEIAHPYVKDFSHT 213
>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
antarctica T-34]
Length = 672
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF ++ W+WP PV+L I++ L VW+P+ D+ H MPIITPAYP M +++
Sbjct: 268 IVSRFFIIFYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATH 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM +F+ + + V + K WS LF + F+ Y+ YLQV + +AD
Sbjct: 328 NVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWSELFAKHDFYFKYKYYLQVIASSGSADLQ 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQC-HPYPHEYVDTSKPCAHC--AFFMGLQRKPGE 178
L W G VES++RQL + +E + C HP+ + D C + + P E
Sbjct: 388 LKWHGTVESKIRQLVMKLE--LVPTITCAHPFIKGF-DQVSECHNDNEVRLVATGDIPDE 444
Query: 179 VVQEGQQFD 187
V Q Q+ D
Sbjct: 445 VAQRTQKVD 453
>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
Length = 554
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 117/204 (57%), Gaps = 12/204 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ + F +++ W+WP PV+L I D A+L VWDPR+N+ D+ H MPI+TPA+P
Sbjct: 266 LIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLMPIVTPAFPQ 325
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NVS S+++V+ ++ + C+ ++ W L E FF Y++++ + + A
Sbjct: 326 QNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEINFFSRYKHFISLSMTAE 385
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
D LA+ G+ ESR+RQL L++E++ KL H P ++ P +F+GLQ
Sbjct: 386 TEKDELAFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFKAAKDP-KKSVWFIGLQFD- 442
Query: 177 GEVVQEGQQFDIRGSVEEFKLSIN 200
+ + D+ +++FK +I+
Sbjct: 443 ----ENVKNLDLTKDIQQFKRNID 462
>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
Length = 563
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++VS+FFR+ + W WP PV+L ID+ L VW+P+ DK H MPIITPAYP M ++
Sbjct: 253 VIVSKFFRILSQWNWPQPVLLKPIDDGPLQVRVWNPKLYPSDKAHRMPIITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST V++ + I +++ K WSALFE + FF YR YL V + AD
Sbjct: 313 HNITPSTQTVILREMARAGLIVDDIMAGKKPWSALFEKHDFFHRYRYYLTVTAASKTADS 372
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VES+LR +E L HP+
Sbjct: 373 QLKWSGLVESKLRHFVTRLELVDAITL-AHPF 403
>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
Length = 672
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF ++ W+WP PV+L I++ L VW+P+ D+ H MPIITPAYP M +++
Sbjct: 268 IVSRFFIIFYQWKWPQPVLLTPIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATH 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM +F+ + + V + K W LF + FF Y+ YLQV + +AD
Sbjct: 328 NVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWCELFAKHDFFFKYKYYLQVIASSGSADLQ 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQC-HPY 152
L W G VES++RQL + +E + C HP+
Sbjct: 388 LKWHGTVESKIRQLVMKLE--LVPTITCAHPF 417
>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
Length = 631
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 32/201 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRKNRRDKTHHMPIITPAYPCM 57
L+ +FF+VY++W W PV+L I + + F VWDP KN +DK H MPIITPA+PCM
Sbjct: 331 LICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIITPAFPCM 390
Query: 58 NSSYNVSTSTLRVMMDQFQYGNTICEEVE----------LNK---------------AQW 92
NS++NV+ T +++++F+ ++I + +E +NK W
Sbjct: 391 NSTHNVTYCTRNILIEEFKRAHSIIQYMEDENNIKSSIRMNKLWPNNNVNNINNSSNNVW 450
Query: 93 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
+ EP F +Y+++L + I+ N +WKGW+ES++R L +E T +L+ P+
Sbjct: 451 MTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TINELKIRPF 508
Query: 153 PHEYVDTSKPCAHC-AFFMGL 172
P Y + +C +FF+ L
Sbjct: 509 PKFYFYKKEKSYYCSSFFIAL 529
>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
Length = 547
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 98/159 (61%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +YT W WP PV+L AI++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 252 VIVEKFFSIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRLHRMPVITPAYPSMCAT 311
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD- 119
+N+++ST +V++ + G ++ + + + WS LFE + FF YR YL V VAA D
Sbjct: 312 HNITSSTQKVIIQELLRGASVMKSIFEGEKTWSDLFERHNFFHRYRFYLCV--VAATVDS 369
Query: 120 --DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
+ W G+VES+LRQL L +E T G HPY ++
Sbjct: 370 AEEHHKWHGFVESKLRQLVLKLE-STEGIEIAHPYVKDF 407
>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
Length = 512
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 126/242 (52%), Gaps = 15/242 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDE-----AELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ +FFRV+++W+W PV LC I E + F VWDPR N +D+ H MPIITPA+P
Sbjct: 262 LIEKFFRVFSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLMPIITPAFPS 321
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVEL-NKAQWSALFEPYLFFESYRNYLQVDIVA 115
MNS++NV+ +T +V+ ++ I + L N W + E F +Y+++L +++
Sbjct: 322 MNSTHNVTATTKKVITEELMRALEIFKTPNLSNLELWEKVLEEQDVFSNYKHFLVIEVYG 381
Query: 116 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP--HEYVDTSKPCAHCAFFMGLQ 173
+ W+GW+ SR+R L +E G P P ++ D + A AFF +
Sbjct: 382 STEHAHGKWEGWIGSRMRFLISRLE--NLGNTHIRPIPGFFKFEDDNWDYASSAFF-AFK 438
Query: 174 RKPGEVVQEGQQFDIRGSVEEFKLSINMYM---FWKPGMEICVSHIRRKQIPPYVFPEGY 230
G V + + DIR +V+ FK IN + ++ + + H++ Q+P YV
Sbjct: 439 VISG-VAENSKTLDIRSAVQSFKDIINNWSDMEKYRDQISFNIKHLKNNQLPDYVLSNKS 497
Query: 231 KR 232
K+
Sbjct: 498 KK 499
>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
Length = 571
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 6/155 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +Y W WP PV+L I++ L VW+P+ D+ H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFHIYAQWSWPQPVLLKPIEDGPLQVRVWNPKLYPHDRQHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---N 117
+N+++ST ++++D+F+ G I ++ +NK+ WS L + FF Y+ YL IVAA +
Sbjct: 313 HNITSSTQKIILDEFKRGIDIMSQISMNKSTWSDLLARHTFFYKYKFYLC--IVAATQGS 370
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
++D L W G VESRLR L +E T G HPY
Sbjct: 371 SEDHLKWGGMVESRLRLLIQKLEM-TEGIEIAHPY 404
>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 100/159 (62%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +YT W WP PV+L AI++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 252 VIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPAYPSMCAT 311
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---N 117
+N+++ST +V++ + G++I + + + WS LF + FF YR YL V VAA +
Sbjct: 312 HNITSSTQKVILQELTRGSSIMKSILEGEKSWSDLFARHDFFHRYRFYLCV--VAATSES 369
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
A++ W G+VES+LRQL + +E T G HPY ++
Sbjct: 370 AEEHHKWHGFVESKLRQLVIKLE-STEGVELAHPYVKDF 407
>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
Length = 628
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 39/206 (18%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ +FFRVY++W W PV++ I++ FSVWDP KN +DK H MPIITPA+PC
Sbjct: 344 LICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVMPIITPAFPC 403
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ------------------------- 91
MNS++NV+ T +++D+F+ + I +E+N
Sbjct: 404 MNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGIVTPVSTPSSNSSS 463
Query: 92 -----WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGK 146
W+ + +P F +Y+++L + I+A N +WKGW+ES++R L +E T +
Sbjct: 464 SSSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGWIESKIRLLFKKLE--TINE 521
Query: 147 LQCHPYPHEYVDTSKPCAHCAFFMGL 172
L+ PYP YV K C F +
Sbjct: 522 LRIRPYPKFYV--YKKDNTCVFLKNI 545
>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
Length = 486
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 6/193 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI---DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
L+ +FF V++ W WPNPV+L I E +LGF +WDPR N D+ H MPIITPAYP N
Sbjct: 264 LLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFQIWDPRTNPGDRYHLMPIITPAYPQQN 323
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
S++VS ST ++M D+F E+V KA W LF P FF Y++Y+ + +
Sbjct: 324 FSFSVSMSTRKIMCDEFFIRLKNTEDVISGKANWDILFTPPNFFHKYKHYIVLSASSNTE 383
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--VDTSKPCAHCAFFMGLQRKP 176
++ L W G VES++R L +E + Y KL H P Y +D+ +F+GL +
Sbjct: 384 EEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPLDSEGEKHVTRWFIGLMCEK 442
Query: 177 GEVVQEGQQFDIR 189
E V ++I+
Sbjct: 443 LENVNINLTYEIQ 455
>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 99/159 (62%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +YT W WP PV+L AI++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 252 VIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPAYPSMCAT 311
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---N 117
+N+++ST +V++ + G+ I + + + WS LF + FF YR YL V VAA +
Sbjct: 312 HNITSSTQKVILQELTRGSNIMKSILEGEKSWSDLFARHDFFHRYRFYLCV--VAATSES 369
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
A++ W G+VES+LRQL + +E T G HPY ++
Sbjct: 370 AEEHHKWHGFVESKLRQLVIKLE-STEGVELAHPYVKDF 407
>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
Length = 842
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 133/270 (49%), Gaps = 28/270 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLC------AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYP 55
LV +FF +YT W WP+PV+L A D L VWDPR D+ H MPI+TPA+P
Sbjct: 397 LVQKFFLLYTKWEWPHPVVLKETEISHARDMPSLQELVWDPRSRSGDRFHLMPIVTPAFP 456
Query: 56 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVA 115
NS++NV+ S+L+++M++ + G ++ K WSALFE FF Y+++L + ++
Sbjct: 457 QQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKTGWSALFEEVNFFSRYKHFLALLCLS 516
Query: 116 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--------VDTSKPCAHC- 166
A D L W G VES++R L +ER ++ CH + Y V S C
Sbjct: 517 ATEQDELVWCGLVESKIRFLIASLERRESIRV-CHVHTKYYQPRNDPFPVQVSLQNPRCR 575
Query: 167 AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEICVSHIRRKQIP 222
+F+GL ++ DI+ V+ F +N + GM + ++R+ ++
Sbjct: 576 LWFIGLDLNKT----VSRKIDIQHEVQSFMDLLNSMATTQNIYVEGMSVIPHYLRKAELV 631
Query: 223 PYV----FPEGYKRTRHPRLASQQRSSENG 248
++ G K + R+A+ Q G
Sbjct: 632 KWLKMEDLTRGKKAPKRRRIATSQNQQATG 661
>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
Length = 626
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 111/218 (50%), Gaps = 49/218 (22%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRKNRRDKTHHMPIITPAYPCM 57
L+ +FFRVY++W W PV++ I + + F++WDP KN +DK H MPIITPA+PCM
Sbjct: 330 LICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIITPAFPCM 389
Query: 58 NSSYNVSTSTLRVMMDQFQYGNTICEEVELN----------------------------- 88
NS++NV+ T +++++F+ ++I ++LN
Sbjct: 390 NSTHNVTYCTRSILIEEFKRAHSIINYMDLNPDADIGQVMEHVNNLMSYGNAININNVGK 449
Query: 89 -------------KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 135
+ WS + EP+ F++Y+++L + I+ N WKGW+ES++R L
Sbjct: 450 SGDNENVNIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIESKIRLL 509
Query: 136 TLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 172
+E T +L+ P+P Y +C +FF+ L
Sbjct: 510 FKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545
>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
Length = 560
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 98/160 (61%), Gaps = 2/160 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +YT W WP PV+L I++ L VW+PR D+ H MPIITPAYP M ++
Sbjct: 253 VIVDKFFNIYTKWNWPQPVLLKPIEDGPLQVKVWNPRLYTNDRNHRMPIITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI-VAANAD 119
+N+++ST +V++ + G I +++L K WS LF+ + FF Y+ YL + + AN +
Sbjct: 313 HNITSSTQKVILSELVKGVDIVGDIKLGKRTWSDLFQRHDFFFRYKFYLCIVVGTKANEE 372
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 159
+ W G+VES+LR L +E T G HPY ++ D+
Sbjct: 373 EHSKWSGFVESKLRLLVQKLEA-TSGIEIAHPYVKDFNDS 411
>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
Length = 558
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 98/159 (61%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +YT W WP PV+L +I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 254 VIVEKFFSIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD- 119
+N+++ST +V++ + G++I ++ WS LF+ + +F +Y+ YL V VAA D
Sbjct: 314 HNITSSTQKVILKELSRGSSIMNDINTGNKTWSDLFKRHEYFHAYKFYLCV--VAATVDT 371
Query: 120 --DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G+VESRLRQL L +E T G HPY ++
Sbjct: 372 SEQHKKWSGFVESRLRQLVLKLEV-TDGIEFAHPYVKDF 409
>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
Length = 554
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 24/230 (10%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
MLVSRFF +Y W+WP PV L S D+ HHMPII P +P S
Sbjct: 289 MLVSRFFWIYAHWQWPTPVTLVETQPDHADGS---------DRHHHMPIIIPVHPYSCCS 339
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVEL------NKAQWSALFEPYLFFESYRNYLQVDIV 114
YNV+ STL+ + +F G ++E N W+ LFE + F SY ++Q+ +
Sbjct: 340 YNVTRSTLQKLKSEFSRGWDAIMKMETKWGTLPNSGDWNILFERFPFCSSYEYFIQIYVT 399
Query: 115 AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQR 174
A++ DD +W+GWVESR R L L E+ C P P+ Y D + HC F GL+
Sbjct: 400 ASDEDDFRSWRGWVESRFRHLLLKFEK---LPAYCDPNPYPYFDKNVKEPHCYFLWGLK- 455
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPY 224
+++ D+ +EF+L ++ +PG ++ ++ + R Q+P +
Sbjct: 456 -----LRKNISVDMADLEDEFRLYLSNGYEGRPGCDVHLTLLNRFQLPSF 500
>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
Length = 598
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V+RFF + W+WP PV+L +++ L VW+P+ D++H MPIITPAYP M +++
Sbjct: 257 IVNRFFLIMYQWKWPQPVLLRPLEDGPLQVRVWNPKLYPADRSHRMPIITPAYPSMCATH 316
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST ++M+ +F+ G + + L QWS LF FF+ +++YLQ+ + +++
Sbjct: 317 NVTESTRKIMIQEFKNGIDVASNIILGSGQWSDLFVKSDFFQQFKHYLQITSSSYSSETQ 376
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VE++LRQL L +E +L HPY
Sbjct: 377 LMWSGLVEAKLRQLVLKLETVDMIEL-AHPY 406
>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
Length = 555
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 95/153 (62%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF++ + W+WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD- 119
+N++ ST +V++ +F+ G I ++ NK W+ LF+ + FF Y+ YL + D
Sbjct: 314 HNITESTKKVILKEFERGMKITNDIFSNKLTWNDLFKKHTFFYDYKFYLTITTATKGTDE 373
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
D L W G VES++R L L +E G HPY
Sbjct: 374 DHLKWSGLVESKVRLLILKLEA-LPGITLTHPY 405
>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 599
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 134/299 (44%), Gaps = 64/299 (21%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + + G I E++ L + +WS LF + FF + Y+ YL + + + +
Sbjct: 319 HNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNITASSTSKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----------------------- 156
W G VE++LR L + +++ ++ HP+P +
Sbjct: 379 AQSVWSGLVEAKLRHLVIALDKKASIEV-AHPFPKGFERVHRCKDEKEIEVAKSGLTRFQ 437
Query: 157 --------VDTSKPCAHCA-----------------------------FFMGLQRKPGEV 179
D + AH A +++GL+ KP V
Sbjct: 438 VKGTKTATTDETNDPAHVAALESANGSINMPGLGQTEESNNHTLHTTTYYIGLELKP-LV 496
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHPR 237
+ DI FK + ++PG+ ++ ++H+R +P VF G R P+
Sbjct: 497 PGASRSLDISSETHMFKNMCTSWAQYQPGINDLTITHVRNYDLPEDVFHPGETRPVRPK 555
>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
Length = 587
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 133/299 (44%), Gaps = 64/299 (21%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 247 VIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 306
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + + G I E++ L + +WS LF + FF + Y+ YL + + + +
Sbjct: 307 HNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNITASSTSKE 366
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----------------------- 156
W G VE++LR L + +++ + HP+P +
Sbjct: 367 AQSVWSGLVEAKLRHLVIALDKKASIDV-AHPFPKGFERVHSCKDEKEIEVAKSGLTRFQ 425
Query: 157 --------VDTSKPCAHCA-----------------------------FFMGLQRKPGEV 179
D + AH A +++GL+ KP V
Sbjct: 426 VKGTKTATTDETNDPAHVAALESANGSINMPGLGQTEDSNNHTLHTTTYYIGLELKP-LV 484
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHPR 237
+ DI FK + ++PG+ ++ ++H+R +P VF G R P+
Sbjct: 485 PGASRSLDISSETHMFKNMCTSWAQYQPGINDVTITHVRNYDLPEDVFHPGETRPVRPK 543
>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
Length = 599
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 133/299 (44%), Gaps = 64/299 (21%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + + G I E++ L + +WS LF + FF + Y+ YL + + + +
Sbjct: 319 HNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNITASSTSKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----------------------- 156
W G VE++LR L + +++ + HP+P +
Sbjct: 379 AQSVWSGLVEAKLRHLVIALDKKASIDV-AHPFPKGFERVHSCKDEKEIEVAKSGLTRFQ 437
Query: 157 --------VDTSKPCAHCA-----------------------------FFMGLQRKPGEV 179
D + AH A +++GL+ KP V
Sbjct: 438 VKGTKTATTDETNDPAHVAALESANGSINMPGLGQTEDSNNHTLHTTTYYIGLELKP-LV 496
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHPR 237
+ DI FK + ++PG+ ++ ++H+R +P VF G R P+
Sbjct: 497 PGASRSLDISSETHMFKNMCTSWAQYQPGINDVTITHVRNYDLPEDVFHPGETRPVRPK 555
>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 644
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 152/342 (44%), Gaps = 50/342 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
++ +FF +Y W WP PV+L ID + SVW+P+ +RRD+ H MP+ITPAYP M S
Sbjct: 258 IIGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCS 317
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEV-ELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
++N+++ST+ ++ + I +E+ + + W LFE FF Y+ Y+QV A+ +
Sbjct: 318 THNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVDFFSMYKTYVQVVASASTS 377
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP------------------------YPH 154
D + W G VESR+R L +E +T + HP
Sbjct: 378 DGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRLFYCLTEEEQAAASQGELTA 436
Query: 155 EYVDTS---------KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMF 204
E +D + + +FF+GL+ + G+ ++ ++F + N +
Sbjct: 437 EMIDRTEEDVKDKEHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKFCAVCQNWDKY 496
Query: 205 WKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPE 264
+ M + + +R ++P YVFP+G +++ QQ S + G
Sbjct: 497 NEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNGSGDAGMNDGSEG-------- 548
Query: 265 SVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPV 306
GP KR ++ P P+ V G++ P+
Sbjct: 549 ----QGPSKRTKSEQTSINNFEPQQQLPNGVPVPNGADPVPL 586
>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
Length = 598
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 64/312 (20%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + Q G I +++ L + +W LF + FF + Y+ YL + + +
Sbjct: 319 HNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------------------------- 154
W G VES++R L ++R + HP+P
Sbjct: 379 AESVWSGLVESKIRHLVGALDRKATIAI-AHPFPKGFERVHRVSSEEEIEAVKTGSTKYQ 437
Query: 155 ------EYVDTSKPCAHCA-----------------------------FFMGLQRKPGEV 179
E D K AH A +++GL+ KP E
Sbjct: 438 DKGTKTETTDEMKDAAHQAAAQNGAENTDVAAAENKPVDDTHVMYTTTYYIGLELKPLE- 496
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHPRL 238
+ DI + FK + + ++PG+ ++ ++H+R +P VF G R P+
Sbjct: 497 PGASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDLPEDVFQPGETRPTRPKK 556
Query: 239 ASQQRSSENGNE 250
+++ +G +
Sbjct: 557 KIVKKAEISGQK 568
>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
Length = 582
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 114/198 (57%), Gaps = 12/198 (6%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF++ + W+WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD- 119
+N++ ST +V++ + G I ++ NK W+ LF+ + FF Y+ YL V + A N D
Sbjct: 314 HNITESTKKVILGELGRGIRITNDIFTNKKTWADLFQRHTFFHEYKFYLTV-MAATNGDS 372
Query: 120 -DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGE 178
L W G VES++R L L +E T K+ HPY +KP A++ + + +
Sbjct: 373 EQHLKWSGMVESKVRLLVLKLEALTGIKI-AHPY-------TKPF-ETAYYYHNEEERKK 423
Query: 179 VVQEGQQFDIRGSVEEFK 196
+V + ++EFK
Sbjct: 424 IVDNYGTYKTEDVLKEFK 441
>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
Length = 513
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 129/243 (53%), Gaps = 22/243 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI----DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCM 57
L+ + F V++ W WP+PV+L + D L VWDPR+N D+ H MPIITP++P
Sbjct: 239 LIQKVFFVFSTWNWPSPVILKHMENRFDMQNLSQLVWDPRRNYADRLHLMPIITPSFPEQ 298
Query: 58 NSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAAN 117
NS++NVS STL+V+ ++ + ICE V+ KA W L E FF YR+ + V I A
Sbjct: 299 NSTHNVSRSTLQVIQNEMKEAFKICEHVQKGKATWKDLLEETNFFCKYRHLIAVSINAEK 358
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA-----HCAFFMGL 172
+ + G+ ESR+RQL ++ER++ ++ V+T K A +F+GL
Sbjct: 359 EKEDTDFAGFFESRIRQLVQLLERNSQVQI-------AQVNTRKFKAPFSPGKSQWFIGL 411
Query: 173 QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG-MEICVSHIRRKQIPPYVFPEGYK 231
E +Q + D+ ++ FK I K G ++I +++++ ++ Y+ K
Sbjct: 412 -----EFIQAAKNLDLTEEIKRFKKIIGNQAKEKIGTVQIDAAYVKKSKLITYISAAELK 466
Query: 232 RTR 234
R +
Sbjct: 467 RGK 469
>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
Length = 613
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 49/218 (22%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRKNRRDKTHHMPIITPAYPCM 57
L+ +FFRVY++W W PV++ I + + F++WDP KN +DK H MPIITPA+PCM
Sbjct: 330 LICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIITPAFPCM 389
Query: 58 NSSYNVSTSTLRVMMDQFQYGNTICEEVELN----------------------------- 88
NS++NV+ T +++++F+ ++I ++ N
Sbjct: 390 NSTHNVTYCTRSILIEEFKRAHSIINYMDSNPDADISQVMEHVNNLMSHGNAININNVGK 449
Query: 89 -------------KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 135
+ WS + EP+ F++Y+++L + I+ N WKGW+ES++R L
Sbjct: 450 SGDNENVNIHNNNSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIESKIRLL 509
Query: 136 TLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 172
+E T +L+ P+P Y +C +FF+ L
Sbjct: 510 FKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545
>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
Length = 558
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 127/269 (47%), Gaps = 48/269 (17%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V RFF + W+WP PV+L I+E L +W+P+ D+ H MPIITP+YP MNS++
Sbjct: 255 IVRRFFGIMWRWQWPQPVLLKQIEEGPLEVRIWNPQVYPSDRAHRMPIITPSYPSMNSTH 314
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST VM+ +F+ G I +++ +A W+ LF + FF +R+YLQ + A+ADD
Sbjct: 315 NVSYSTQTVMIHEFKRGLDIVGQIQKGEASWADLFNKHTFFTDFRHYLQ---IVASADDQ 371
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQC-HPYPHEYV----------------------- 157
+ W QL L ++ +Q P+ +
Sbjct: 372 HSHDKW------QLVLRLDAQEGSIIQVTRPFIKGFERIYHCISDDERRAATEGRFSDLK 425
Query: 158 --------DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFW---- 205
D + AFF+GL+ KP + +Q +I EF N+ W
Sbjct: 426 AAEGRPAGDKTTTVYTTAFFLGLEFKPKDGNSGTRQLNISFPTGEF---CNLVKKWETYD 482
Query: 206 KPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
+ M + V HI+R ++P +V+ +R R
Sbjct: 483 ETKMRVNVRHIKRSELPEFVYESPAERPR 511
>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 642
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 50/342 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
+V +FF +Y W WP PV+L ID + SVW+P+ +RRD+ H MP+ITPAYP M S
Sbjct: 258 IVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCS 317
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEV-ELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
++N+++ST+ ++ + I +E+ + + W LFE FF Y+ Y+QV A+ +
Sbjct: 318 THNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVDFFSMYKTYVQVVASASTS 377
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP------------------------YPH 154
D + W G VESR+R L +E +T + HP
Sbjct: 378 DGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRVFYCLTEEEQAAASQGELTA 436
Query: 155 EYVDTS---------KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMF 204
E +D + + +FF+GL+ + G+ ++ ++F + N +
Sbjct: 437 EMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKFCAVCQNWDKY 496
Query: 205 WKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPE 264
+ M + + +R ++P YVFP+G +++ QQ S + G
Sbjct: 497 NEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNGSGDAGMNDGSEG-------- 548
Query: 265 SVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPV 306
GP KR ++ P P+ V G++ P+
Sbjct: 549 ----QGPSKRTKSEQTLINNFEPQQQLPNGVPVPNGADPVPL 586
>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
Length = 598
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 138/317 (43%), Gaps = 72/317 (22%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + Q G I +++ L + W+ LF + FF + Y+ YL + + +
Sbjct: 319 HNVSMSTKAVILRELQRGGDIVDKIFLKQMTWNDLFARHSFFTQDYKYYLSITASSKTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------------------------- 154
W G VES++R L ++R + HP+P
Sbjct: 379 AESVWSGLVESKIRHLVGALDRKNTIAV-AHPFPKGFERVHLVSSEEEAEAVKNGSTKYQ 437
Query: 155 ------EYVDTSKPCAHCA-----------------------------FFMGLQRKPGEV 179
E D + AH A +++GL+ KP E
Sbjct: 438 DKGTKTETTDETNDIAHQAAAQNGVENAEVEPVGQKENGDSRTIYTTTYYIGLELKPLE- 496
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKR------ 232
+ DI + FK + + ++PG+ ++ ++H+R +P VF G R
Sbjct: 497 PGASRSLDISTDAQIFKSTCTSWAGYQPGINDLAITHVRNFDLPDDVFQPGETRPTRPKK 556
Query: 233 --TRHPRLASQQRSSEN 247
R P +Q+R E+
Sbjct: 557 KIIRRPEAGAQKRGIES 573
>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 643
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 50/342 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
+V +FF +Y W WP PV+L ID + SVW+P+ +RRD+ H MP+ITPAYP M S
Sbjct: 259 IVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCS 318
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEV-ELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
++N+++ST+ ++ + I +E+ + + W LFE FF Y+ Y+QV A+ +
Sbjct: 319 THNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVDFFSMYKTYVQVVASASTS 378
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP------------------------YPH 154
D + W G VESR+R L +E +T + HP
Sbjct: 379 DGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRVFYCLTEEEQAAASQGELTA 437
Query: 155 EYVDTS---------KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMF 204
E +D + + +FF+GL+ + G+ ++ ++F + N +
Sbjct: 438 EMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKFCAVCQNWDKY 497
Query: 205 WKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPE 264
+ M + + +R ++P YVFP+G +++ QQ S + G
Sbjct: 498 NEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNGSGDAGMNDGSEG-------- 549
Query: 265 SVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPV 306
GP KR ++ P P+ V G++ P+
Sbjct: 550 ----QGPSKRTKSEQTLINNFEPQQQLPNGVPVPNGADPVPL 587
>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 576
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 1 MLVSRFFRVYTMWRWPNPVML---CAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCM 57
++V +FF V++ W WP PV L A + GFSVWD R N D+ H MPIITP YP
Sbjct: 264 VVVQKFFLVFSQWPWPKPVHLRTQTAAHQHLGGFSVWDSRTNVADRYHLMPIITPVYPEQ 323
Query: 58 NSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAAN 117
NS++N S ST +M F+ G + E + K W LF P FF Y+ ++ + VA
Sbjct: 324 NSTFNTSLSTRTIMTKAFKEGLAVTENILKGKGTWHDLFSPPEFFGQYKTFIMLTAVANT 383
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
+DLL W G VES++R L + +ER ++ +P + V KP P
Sbjct: 384 KEDLLTWYGLVESKIRTLIISLERVPCIEIAHVNPKSYNKVKEDKP-------------P 430
Query: 177 GEVVQEGQQFDIRGSVE 193
E V+E Q+ + S E
Sbjct: 431 AEPVKEQQEESPKASAE 447
>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
Length = 574
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 99/155 (63%), Gaps = 6/155 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF++ W+WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFKILLEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---N 117
+N++ ST +V++ +F+ G + ++ NK W+ LF+ + FF Y+ YL V VA+ +
Sbjct: 314 HNITDSTKKVILQEFERGVQVTNDIFTNKKTWADLFKKHEFFHKYKFYLTV--VASTRGS 371
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
+ L W G+VES+LR L L +E KL HPY
Sbjct: 372 TEQHLKWSGFVESKLRLLVLKLETLAGIKL-AHPY 405
>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
Length = 564
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 99/162 (61%), Gaps = 6/162 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +YT W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHKMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA-- 118
+N+++ST +V+M++ + G+ + ++ LN W+ LF+ + FF Y+ YL I+AA
Sbjct: 313 HNINSSTQKVIMNELERGSELMAQISLNNKTWADLFQRHDFFHRYKFYLC--IIAATEGT 370
Query: 119 -DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 159
++ W G VES+LR L +E T G HPY ++ D+
Sbjct: 371 NEEHSKWSGMVESKLRILIQKLEL-TDGIALAHPYVKDFSDS 411
>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
Length = 598
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V+RFF + T W WP PV+L I++ L VW+P+ D+ H MP+ITPAYP M S+
Sbjct: 254 VIVARFFHILTRWSWPQPVLLKPIEDGPLQVRVWNPKIYANDRLHKMPVITPAYPSMCST 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N+ ST +V++++ Q G + ++ NK W LF+ + FF Y+ YL V +D+
Sbjct: 314 HNICESTKKVILNELQRGVEVTTDIFTNKKTWGDLFQKHDFFYKYKFYLTVMASTKGSDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 159
L W G VES+LR L L +E + G HPY + T
Sbjct: 374 QHLKWSGLVESKLRLLVLKLEVLS-GINLAHPYTKPFEST 412
>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
Length = 594
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 95/154 (61%), Gaps = 4/154 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF + T W WP PV+L I++ L VW+PR +D++H MP+ITPAYP M ++
Sbjct: 254 VILTRFFHILTKWNWPQPVLLKPIEDGPLQVRVWNPRIYAQDRSHKMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI-VAANAD 119
+N+S ST +V++ + + G I E+ NK WS LF+ + FF Y+ YL V + +++
Sbjct: 314 HNISESTKKVILAELERGAQISSEIFSNKKTWSDLFQKHDFFYKYKFYLTVMASTSGSSE 373
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQ-CHPY 152
L W G VES+LR L +E T G + HP+
Sbjct: 374 QHLKWSGLVESKLRLLVQKLE--TLGGINLAHPF 405
>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +Y+ W WP PV+L I++ L VW+PR D++H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRSHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL-QVDIVAANAD 119
+N+++ST +++ +F+ G I ++ + K +W LF + FF Y+ YL V +A+
Sbjct: 313 HNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEFFFRYKFYLCVVASTKGSAE 372
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 158
+ L W G VES+LR L +E T G HPY + D
Sbjct: 373 EHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
Length = 428
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 64/298 (21%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 89 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 148
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + Q G I +++ L + +W LF + FF + Y+ YL + + +
Sbjct: 149 HNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKE 208
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------------------------- 154
W G VES++R L ++R + HP+P
Sbjct: 209 AESVWSGLVESKIRHLVGALDRKATIAI-AHPFPKGFERVHRVSSEEEIEAVKTGSTKYQ 267
Query: 155 ------EYVDTSKPCAHCA-----------------------------FFMGLQRKPGEV 179
E D K AH A +++GL+ KP E
Sbjct: 268 DKGTKTETTDEMKDAAHQAAAQNGAENTDVAAAENKPVDDTHVMYTTTYYIGLELKPLE- 326
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHP 236
+ DI + FK + + ++PG+ ++ ++H+R +P VF G R P
Sbjct: 327 PGASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDLPEDVFQPGETRPTRP 384
>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 64/299 (21%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ T W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHTDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N+S ST V++ + Q G I +++ + W+ LF + FF + Y+ YLQ+ + +
Sbjct: 319 HNISLSTKAVILRELQRGGDIVDKIFAKQLTWNDLFTRHTFFSKDYKYYLQITASSKTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------------------------- 154
W G VES+LR L ++R + HP+P
Sbjct: 379 ADSVWSGLVESKLRHLVGALDRKNIIAV-AHPFPKGFERIHVVKDDAEAEQVKNGSTKYQ 437
Query: 155 ------EYVDTSKPCAHCA-----------------------------FFMGLQRKPGEV 179
E D +K AH A +++GL+ KP E
Sbjct: 438 AQGTKTETTDQTKDPAHTAAAENGAQDIQVPDPETKGAVDSRTIYTTTYYIGLELKPLE- 496
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHPR 237
+ DI FK + + ++ G+ ++ ++H+R +P VF G R P+
Sbjct: 497 PGASRSLDISTDANIFKSTCTSWQGFQEGINDLSITHVRSFDLPDDVFEPGETRPVRPK 555
>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 639
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 94/152 (61%), Gaps = 1/152 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++++FFR+ + W+WP PV+L I++ L VW+P+ + D+ H MPIITPAYP M S+
Sbjct: 309 VVIAKFFRILSQWKWPQPVLLKPIEDGPLQVRVWNPKIYKGDQAHRMPIITPAYPSMCST 368
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +V++++ I +++ WS LF + FF Y+ YL + + +A+
Sbjct: 369 HNITESTQKVIINEMNRAGDIADKILNGTLPWSTLFAKHTFFHQYKYYLVIVAASKSAEM 428
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VES++RQL L +E KL HP+
Sbjct: 429 QLKWSGLVESKVRQLVLRLEYVDEIKL-AHPF 459
>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 533
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 6/147 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ RFF++ W WPN + L +AELG VW+ R N H MPIITPAYP MNSS
Sbjct: 249 LLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARAN---SWHCMPIITPAYPVMNSSA 305
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA---LFEPYLFFESYRNYLQVDIVAANA 118
NVS TL VM +F G + + K SA LFEP FF Y +YL VD++A++
Sbjct: 306 NVSRFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSE 365
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYG 145
D+ AW GWVESRLR++T ++ G
Sbjct: 366 DEHRAWVGWVESRLRKVTNRFRMESVG 392
>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
Length = 1547
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 93/155 (60%), Gaps = 6/155 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++VS+FF++Y W+WP PV+L I++ L +W+P+ +D+ H MP+ITPAYP M ++
Sbjct: 1215 VIVSKFFQIYLQWKWPQPVLLKPIEDGPLPVRIWNPKLYGQDRLHRMPVITPAYPSMCAT 1274
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST ++++ + Q G I +++ K W LF + FF +Y+ YL V + A D
Sbjct: 1275 HNITASTQKIILKEMQRGLEIMNDIQFGKRTWKDLFAKHDFFFAYKFYLTV--ITATRDS 1332
Query: 121 L---LAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VES+LR L +E G + HPY
Sbjct: 1333 YEAHLKWSGMVESKLRLLVQKLEV-VNGIVLAHPY 1366
>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 572
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF++ + W+WP PV+L I++ L VW+P+ +D+ H MP+ITPAYP M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRCHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI-VAANAD 119
+N++ ST +V++ +F+ G I + NKA W LF+ + FF Y+ YL V N +
Sbjct: 314 HNITESTKKVILKEFERGVEITNNIFSNKATWEDLFKRHTFFHDYKFYLTVTASTKGNDE 373
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VES++R L L +E G HPY
Sbjct: 374 QHLKWSGLVESKVRLLILKLEA-LPGIKSAHPY 405
>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
Length = 393
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 150/343 (43%), Gaps = 74/343 (21%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 50 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 109
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + Q G I +++ L + +W LF + FF + Y+ YL + + +
Sbjct: 110 HNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKE 169
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------------------------- 154
W G VES++R L ++R + HP+P
Sbjct: 170 AESVWSGLVESKIRHLVGALDRKATIAI-AHPFPKGFERVHRVSSEEEIEAVKTGSTKYQ 228
Query: 155 ------EYVDTSKPCAHCA-----------------------------FFMGLQRKPGEV 179
E D K AH A +++GL+ KP E
Sbjct: 229 DKGTKTETTDEMKDAAHQAAAQNGAENTDVAAAENKPVDDTHVMYTTTYYIGLELKPLE- 287
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHPRL 238
+ DI + FK + + ++PG+ ++ ++H+R +P VF G R P+
Sbjct: 288 PGASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDLPEDVFQPGETRPTRPKK 347
Query: 239 ASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQK 281
+++ +G +K++ ES+D +K + Q+
Sbjct: 348 KIIKKAEISG----------QKRNIESLDVSARKKAKVAYEQR 380
>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 97/153 (63%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF++ + W+WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD- 119
+N++ ST +V++++F G + ++ NK W+ LF+ + FF Y+ YL + + +D
Sbjct: 314 HNITESTKKVILEEFARGIQVTNDIFSNKGTWADLFQKHDFFYKYKFYLTITVSTKGSDE 373
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
+ L W G VES+ R L L +E KL HP+
Sbjct: 374 EHLKWSGLVESKTRLLVLKLEALAGIKL-AHPF 405
>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
Length = 684
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 117/217 (53%), Gaps = 27/217 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV R F +++ W WP+PV+L + D L +WDPR D+ H MPIITPA+P
Sbjct: 284 LVHRMFFIFSTWTWPHPVLLKELNQDRNDIPTLCELIWDPRHKNTDRFHLMPIITPAFPE 343
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NV+ ST +++ D+ IC ++ +A+WSALFE FF Y++++ + + A
Sbjct: 344 QNSTHNVTRSTHQIIKDEIWEALEICRDIHDGRAKWSALFEEVNFFSRYKHFIALIMAAP 403
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF-------- 168
N ++ L++ G++ESR+R L +ER+ + H P+++ KP + F
Sbjct: 404 NEEEELSYGGFLESRIRLLVQSLERNP-DIILAHNDPNKH----KPSKNAKFDVSPENKR 458
Query: 169 ----FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINM 201
F+GL E + + D+ ++ FK ++ +
Sbjct: 459 ITVWFIGL-----EFAEHAKNLDLTNEIQRFKTNVEL 490
>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +Y+ W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL-QVDIVAANAD 119
+N+++ST +++ +F+ G I ++ + K +W LF + FF Y+ YL V +A+
Sbjct: 313 HNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEFFFRYKFYLCVVASTKGSAE 372
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 158
+ L W G VES+LR L +E T G HPY + D
Sbjct: 373 EHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
Length = 572
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 4/154 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++VS+FF + T W WP PV+L I++ L VW+PR +D+ H MP+ITPAYP M ++
Sbjct: 254 VIVSKFFHILTQWNWPQPVLLKPIEDGPLQVRVWNPRVYPQDRQHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +V++++ Q G+ I ++ +K QW LF + FF Y+ YL + I DD
Sbjct: 314 HNITASTQKVILNELQRGSLIMNDIISHKKQWEDLFVKHDFFYKYKFYLNI-IAFTRGDD 372
Query: 121 --LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VES+LR L +E + G HPY
Sbjct: 373 EQHLKWSGLVESKLRLLVQKLE-NFQGINLAHPY 405
>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
Length = 566
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 89/152 (58%), Gaps = 1/152 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FFR+ W WP P++L I++ L +W+P+ DK H MPIITPAYP M ++
Sbjct: 253 VIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +++ + I +++ + WSALF+ + FF Y++YL + A A+
Sbjct: 313 HNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLTITAAAKTAEA 372
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VES+LR L +E L HP+
Sbjct: 373 QLKWAGLVESKLRHLVTRLELVDAIAL-AHPF 403
>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
Length = 694
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 178/388 (45%), Gaps = 50/388 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ RFF V W+WP + LC +A LG VW+ ++ MPI+TPAYP MNSS+
Sbjct: 262 LLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAGH-NRYQVMPILTPAYPSMNSSF 320
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNK--AQWSALFEPYLFFESYRNYLQVDIVAANAD 119
NVST +L VM ++F+ G TI ++V L+K ++W LFEP FF +++YL V++ +
Sbjct: 321 NVSTHSLTVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSDFFAVHQHYLAVEVYTEKQE 379
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCH------PYPHEYVDTSKPCA--------- 164
+ AW G+ ESR+R+L +E Y C +P +V + A
Sbjct: 380 EEAAWCGFCESRMRKL---VESLAYNPALCRLRAYTKKFPLSFVTGGEAPAGEQPNGAAL 436
Query: 165 ------HCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK--PGMEICVSHI 216
F++G ++ ++ I SVE FK + ++Y + K P M++ V+ +
Sbjct: 437 AQPSKFGVCFYVGFDIDRRQL--RSREVSIDNSVEYFK-NNDLYRWNKRTPTMDVRVTPV 493
Query: 217 RRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD------QDG 270
K +P VF + R R+A ++ + + + S D +DG
Sbjct: 494 VWKALPESVFEDMGGRAVA-RVARREFMKKKKEDEKKAEEAAAPSPSPSGDEGTHSQEDG 552
Query: 271 PEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGD-VSNSSVI 329
E S QK SL+ D + +G GS +P PD E+ G + V+N+ V
Sbjct: 553 DELSCS---QKAASLAND------MANGKGSISQPGSPDPAADGAEVTNGTESVNNTPVK 603
Query: 330 TSVTSEVGSCEDVGNESVAGSSEGNNGS 357
GS E G G + GS
Sbjct: 604 PKKVVSSGSPEMTGKRDRDGKALAGAGS 631
>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
Length = 547
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 10/167 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF++Y+ W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---N 117
+N++ ST V+M +F G + ++ A W LFE + FF Y+ YL IVAA +
Sbjct: 313 HNITKSTKDVIMSEFNRGVNVMAQIHAGTASWGLLFERHRFFFQYKFYLC--IVAATKSS 370
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY--PHE--YVDTS 160
+ + L W G +ES++R L +E T G HPY P E YV TS
Sbjct: 371 SAEHLKWSGMIESKVRLLVQKLEL-TEGITLAHPYVKPFENSYVGTS 416
>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 127/236 (53%), Gaps = 14/236 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA-ELG---FSVWDPRKNRRDKTHHMPIITPAYPCM 57
LV RFF + + W W NPV LC I ++ E+G F VW+P++ D++H MP+ITPA+P M
Sbjct: 266 LVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHLMPVITPAFPSM 325
Query: 58 NSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAAN 117
NS+YNV+ +T R++M + + + + + + W L + FF +Y Y+Q+ + A +
Sbjct: 326 NSTYNVTETTKRIIMGEIERAHKLTLPKK-EQVDWELLCHKFPFFCNYLYYVQIRVSALS 384
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---VDTSKPCAHCAFFMGLQR 174
+ +KG+VESRLR L M+E +T G P+P E VD C +++GL
Sbjct: 385 STAYRKYKGFVESRLRLLVRMLE-NTPGIKSVRPWPEEMPYVVDGEVRENSCCWYIGLDF 443
Query: 175 KPGEVVQEGQQF--DIRGSVEEFKLSINMYM---FWKPGMEICVSHIRRKQIPPYV 225
+ GQ D+R F IN + + E+ +++I R ++P ++
Sbjct: 444 PKLSSMAAGQTVTCDLRNCTSGFFDRINEWSEKDTYHGQFEMDIAYISRPKLPEHL 499
>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
Length = 594
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FFR+ W+WP PV+L I+E L VW+P+ DK H MPIITPAYP M +++
Sbjct: 260 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
NVS ST V++ + + G I +++ + + W+ LF + FF + Y+ YL + + + D
Sbjct: 320 NVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDA 379
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + ++ HP+P +
Sbjct: 380 QSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
Length = 639
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV R F ++ W WP+PV+L + D L VWDPR+ D+ H MPIITPA+P
Sbjct: 257 LVHRMFFIFATWTWPHPVLLNELNSERTDVGALIDLVWDPRRKSTDRFHLMPIITPAFPQ 316
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NV+ ST++V+ + G IC ++ K W ALF+ FF Y++Y+ + + A
Sbjct: 317 QNSTHNVTRSTMQVIRTEICEGLEICRDISEGKCGWDALFKEVNFFSRYKHYIALLMAAP 376
Query: 117 NADDLLAWKGWVESRLRQLTLMIERD-----TYGKLQCH-PYPHEYVDTSKPCAHCAF-F 169
N ++ L + G++ESR+R L +ER+ + H P P+ D S F
Sbjct: 377 NEEEELNYGGFLESRIRLLVQSLERNQDIVIAHNDPNKHKPSPNAKFDVSPENKRITLWF 436
Query: 170 MGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM------EICVSHIRRKQIPP 223
+GL E V+ + D+ + FK ++ + G+ EI + +++R ++
Sbjct: 437 IGL-----EFVEHTKSLDLTSEIHRFKTNVELQASGVKGIGPNCTVEIDMFYVKRNKLFQ 491
Query: 224 YVFPEGYKRTRH 235
+ R RH
Sbjct: 492 IISNADLIRGRH 503
>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
Length = 594
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FFR+ W+WP PV+L I+E L VW+P+ DK H MPIITPAYP M +++
Sbjct: 260 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
NVS ST V++ + + G I +++ + + W+ LF + FF + Y+ YL + + + D
Sbjct: 320 NVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDA 379
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + ++ HP+P +
Sbjct: 380 QSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
Length = 600
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FFR+ W+WP PV+L I+E L VW+P+ DK H MPIITPAYP M +++
Sbjct: 260 VVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
NVS ST V++ + + G I +++ + + W+ LF + FF + Y+ YL + + + D
Sbjct: 320 NVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDA 379
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + ++ HP+P +
Sbjct: 380 QSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
[Aspergillus nidulans FGSC A4]
Length = 601
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 65/299 (21%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 261 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 320
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N+S ST V++ + Q G I +++ +A W+ LF+ + FF + Y+ YL V + +
Sbjct: 321 HNISMSTKAVILRELQRGGDIVDKIWAKQATWNDLFKKHSFFTNDYKYYLGVTASSRTKE 380
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------------------------- 154
W G VES++R L ++R + HP+P
Sbjct: 381 AESVWSGLVESKVRHLVGALDRKPTIAV-AHPFPKGFERIHIVSNEEEAEAVKNGSLKYQ 439
Query: 155 ------EYVDTSKPCAHCA------------------------------FFMGLQRKPGE 178
E D K AH A +++GL+ KP E
Sbjct: 440 DKGTKTETTDEIKDAAHQAAAQSGREDTDVPGAANNTAANDGRIIYTTTYYIGLELKPVE 499
Query: 179 VVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHP 236
+ DI + FK + ++PG+ ++ ++H+R +P +F EG R P
Sbjct: 500 -PGASRSLDISSDAQFFKSMCTSWPGYQPGINDLSITHVRNYDLPEDLFQEGEARPTRP 557
>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
Length = 701
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 129/255 (50%), Gaps = 38/255 (14%)
Query: 2 LVSRFFRVYTMWRWPN-PVMLCAIDEAEL----GFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ RFF VY++W+W N PV+LC I E + F +W+P+ N +D+ H +PIITPA+P
Sbjct: 365 LIHRFFTVYSIWKWKNSPVLLCKIKEHTVEGLSNFKIWNPKVNVQDRHHLLPIITPAFPS 424
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICE----EVELNKAQWSALFEPYLFFESYRNYLQVD 112
MNS++NVS ST RV+ D+F I + + E++ + L L F S++++L++
Sbjct: 425 MNSTHNVSLSTKRVITDEFANAKRIFDVWDKKKEISWTEALHLVLKPLDFTSFKHFLELQ 484
Query: 113 IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP-------HEYVDTSKPCAH 165
I A N W GWVES++R L +ER C P+ E T +P
Sbjct: 485 IFAQNETVHRKWLGWVESKVRFLVRQLERLA----ACPPFAAGGHTPKSEAAMTVRPIP- 539
Query: 166 CAFFMGLQRKPG-----------EVVQEGQQFDIRGSVEEFKLSINMY---MFWKPGMEI 211
C F ++PG Q+ D+R + EF IN + + +++
Sbjct: 540 CTFSF---QEPGWEYASSMLVALNFAQQPCVIDLRPAAGEFVDLINQWPERAQLEGQIQL 596
Query: 212 CVSHIRRKQIPPYVF 226
V H+RR Q+P YV
Sbjct: 597 RVKHVRRSQLPAYVL 611
>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 590
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 135/321 (42%), Gaps = 77/321 (23%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N+S ST V++ + Q G + +++ + + W LF + FF Y+ YL + + +
Sbjct: 319 HNISMSTKAVILRELQRGGDMVDKIFMKQLSWHDLFARHTFFTHDYKYYLSITASSKTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----------------------- 156
W G VES+LR L ++R + HP+P +
Sbjct: 379 AESVWSGLVESKLRHLVGALDRKPIIAV-AHPFPKGFERVHLIKNEQDMEAVKNGSTQHQ 437
Query: 157 --------VDTSKPCAHCA----------------------------------FFMGLQR 174
D +K AH A +++GL+
Sbjct: 438 AKGTKTAMTDETKDAAHQAAVQNTLENAEVPGPAEGTVEGTVDNEGQTVYTTTYYIGLEL 497
Query: 175 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG-----MEICVSHIRRKQIPPYVFPEG 229
KP E Q + DI + FK + + PG ME+ V+H+R +P VF G
Sbjct: 498 KPLEPGQ-SRSLDISTDSQIFKSTCTSW----PGYQEEVMELAVTHVRSFDLPDDVFQPG 552
Query: 230 YKRTRHPRLASQQRSSENGNE 250
R P+ +RS G +
Sbjct: 553 ETRASRPKKKVTKRSETAGQK 573
>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
Length = 587
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++S+FF++ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 258 VVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKIYPSDRGHLMPIITPAYPSMCAT 317
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N++ ST +++ + ++ I + + + W LFE + FF + YR YL V A + D
Sbjct: 318 HNITKSTKSIIIREMKHAAEIMDGIMVGNLSWDKLFERHSFFTNGYRYYLSVVAAAKDKD 377
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
LL W G VES+LR L + +E KL HP+
Sbjct: 378 TLLGWSGLVESKLRHLVMKLEILETIKL-AHPF 409
>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
Length = 616
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 94/157 (59%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++ +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 276 VIIGKFFRIMNQWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 335
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N+S ST V++ + + G I +++ + + +WS LF + FF + Y+ YL + + +
Sbjct: 336 HNISLSTKAVILRELKRGGDIVDKIFMGQLRWSDLFAKHSFFSKDYKYYLSITASSTTKE 395
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L L ++R + ++ HP+P +
Sbjct: 396 AQSVWSGLVESKLRHLVLALDRKSSIEV-AHPFPKGF 431
>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
Length = 449
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 92/178 (51%), Gaps = 29/178 (16%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI--------DEAELG-FSVWDPRKNRRDKTHHMPIITP 52
+V RFFR++ W WPNPV++ A DE+ ++ W+PR N RD+ H PI+TP
Sbjct: 274 VVGRFFRIFDGWDWPNPVLIAAPGAPPSSAGDESVASRYAAWNPRLNPRDRAHLAPIVTP 333
Query: 53 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA------------------ 94
A+P MNSSYNV LR + D+ G VE A W A
Sbjct: 334 AHPTMNSSYNVGAPQLRAIKDELSKGLETTRRVEKLAAHWRADESPTGDRAADLRDAWRR 393
Query: 95 LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
LF P FF +R+Y+QVD+ AA+ L W W ESRLR L + + DT G ++ P+
Sbjct: 394 LFAPSDFFARHRHYVQVDVSAADDAGLRKWNAWCESRLRNLVVAL--DTPGYVRARPH 449
>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
Length = 599
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 92/156 (58%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FFR+ W+WP PV+L I+E L VW+P+ DK H MPIITPAYP M +++
Sbjct: 260 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
NVS ST V++ + + G I + + + + W+ LF + FF + Y+ YL + + + D
Sbjct: 320 NVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFFSQDYKYYLSITSASRSKDA 379
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + ++ HP+P +
Sbjct: 380 QSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
Length = 493
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FFR+ W+WP PV+L I+E L VW+P+ DK H MPIITPAYP M +++
Sbjct: 153 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 212
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
NVS ST V++ + + G I +++ + + W+ LF + FF + Y+ YL + + + D
Sbjct: 213 NVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDA 272
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + ++ HP+P +
Sbjct: 273 QSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 307
>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
Length = 630
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 139/275 (50%), Gaps = 33/275 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVML--CAIDEAE---LGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV R F +++ W WP+PV+L A D + L VWDP K DK H MPIITPA+P
Sbjct: 259 LVHRMFFIFSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPEKKSSDKFHLMPIITPAFPE 318
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NV+ S+ +++ D+ ICE++ KA+W LFE FF Y++++ + + A
Sbjct: 319 QNSTHNVTRSSSQIIKDEIWEALEICEQINDGKAKWKDLFEEVNFFSRYKHFIALIMAAP 378
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF-------- 168
N ++ L++ G++ESR+R L +ER+ + H P+++ KP + F
Sbjct: 379 NEEEELSYGGFLESRIRLLVQSLERNP-DIILAHNDPNKH----KPSKNAKFDVSPENKR 433
Query: 169 ----FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM------EICVSHIRR 218
F+GL E + D+ ++ FK + + G+ EI + H+++
Sbjct: 434 ITVWFIGL-----EFSEHATSLDLTNEIQRFKTNFELQASSVKGIGPTCQVEIDMFHVKQ 488
Query: 219 KQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT 253
+ + + R R + +S++++ N + T
Sbjct: 489 RNLIQVISAADLSRGRRWKKSSKKQNKGNSSNKLT 523
>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
Length = 599
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 92/156 (58%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FFR+ W+WP PV+L I+E L VW+P+ DK H MPIITPAYP M +++
Sbjct: 260 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
NVS ST V++ + + G I + + + + W+ LF + FF + Y+ YL + + + D
Sbjct: 320 NVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFFSQDYKYYLSITSASRSKDA 379
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + ++ HP+P +
Sbjct: 380 QSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
Length = 603
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 130/295 (44%), Gaps = 65/295 (22%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N+S ST V++ + Q G I +++ L + W+ LF + FF + Y+ YL + + +
Sbjct: 319 HNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFTQDYKYYLSITASSRTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------------------------- 154
W G VES++R L ++R + HP+P
Sbjct: 379 AEAVWSGLVESKIRHLVGALDRKPTIAV-AHPFPKGFERVHIVSNEEEAEAVKNGSTKYQ 437
Query: 155 ------EYVDTSKPCAHCA------------------------------FFMGLQRKPGE 178
E D K AH A +++GL+ KP E
Sbjct: 438 DKGTKTETTDERKDAAHQAAALSGVENAEVEPVGEKSANGDSHIIYTTTYYIGLELKPLE 497
Query: 179 VVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKR 232
+ DI + FK + + ++PG+ ++ ++H+R +P VF G R
Sbjct: 498 -PGASRSLDISTDAQIFKSTCTSWAGYQPGINDLSITHVRNFDLPDDVFQPGETR 551
>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 579
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 41/269 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VS+FF + W WP PVML I+E ++G VW+P+ D+ H MPIITPA+P M +++
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
V STLR+M ++F ++I +++ NK W ALFE + FF + ++ YL V + +
Sbjct: 323 TVMPSTLRIMKEEFGRADSILQDIFANKKDWKALFERHTFFTKDHKYYLSVVAASRTKEA 382
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY------PHEYVDTS-KPCAH-------- 165
+ G V+S++R + I+ G PY H D K A
Sbjct: 383 NSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRITDDQFKEVAQGSLDYLIP 442
Query: 166 ---------------------CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI-NMYM 203
F++GL GE + DI V +FK I + +
Sbjct: 443 KSEADAEGTLEANGDTTIVHTTTFYIGLTLPTGEAT---KSLDISYPVSQFKSYITDSDL 499
Query: 204 FWKPGMEICVSHIRRKQIPPYVFPEGYKR 232
+ + M + V H R +P VF EG R
Sbjct: 500 YNEDLMSVKVVHTRSSALPDDVFVEGETR 528
>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 664
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 118/240 (49%), Gaps = 14/240 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLC--AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
+L+ RFF V++ W WP PV + + AE W P+ N D+ H MPIITP YP +N
Sbjct: 396 VLLHRFFLVFSKWTWPTPVWIARPYLGNAEADGVQWCPQTNHHDRAHLMPIITPGYPSVN 455
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKA--QWSALFEPYLFFESYRNYLQVDIVAA 116
S+ NV+ +TLR+M ++FQ G I EE+ A W LF P F Y NYL + + A
Sbjct: 456 SAVNVNRATLRIMQEEFQRGRYIVEEITEKYAFGNWQNLFTPSEFLVRYDNYLVMRVQAL 515
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA--FFMGLQ- 173
N +DL W ++ SRLR+L +E + HPYP T P + + + +G +
Sbjct: 516 NEEDLDQWSNYIASRLRKLVESLEVAIPIR-SVHPYPVLMPGTQDPGVNASGYYLLGFEV 574
Query: 174 --RKPG----EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFP 227
RK G + +E + + ++ KPGM+I + + +P V P
Sbjct: 575 ENRKRGCKSNTLCEEAKACTVSAMRYFIATEVDQCTERKPGMKIDLQYANWNALPLCVLP 634
>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
Length = 598
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 97/157 (61%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++S+FF++ + W+WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N+S ST +V++ + Q G + +++ N+ W LF+ + FF Y+ YL V + +D+
Sbjct: 314 HNISESTKKVILSELQRGVEVTQKIFSNELSWEDLFKKHDFFFKYKFYLTVMVSTKGSDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G+VES+LR L +E G HP+ Y
Sbjct: 374 QHLKWSGFVESKLRLLVQKLEV-LPGINLAHPFIEPY 409
>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
Length = 567
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 95/153 (62%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF++ + W+WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST RV++ + + G +I ++ NK WS LF + FF Y+ YL V D+
Sbjct: 314 HNITESTKRVILQELENGISITNDIFSNKKTWSDLFTKHNFFYKYKFYLTVMASTRGTDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VES++R L L +E KL HP+
Sbjct: 374 ENLKWSGMVESKVRLLVLKLEALPGIKL-AHPF 405
>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 691
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 185/401 (46%), Gaps = 55/401 (13%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ RFF V W+WP + LC +A+LG VW+ ++ MPI+TPAYP MNSS+
Sbjct: 262 LLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAGH-NRYQVMPILTPAYPSMNSSF 320
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNK--AQWSALFEPYLFFESYRNYLQVDIVAANAD 119
NVST +L VM ++F+ G TI ++V L+K ++W LFEP FF +++YL V++ D
Sbjct: 321 NVSTHSLTVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSEFFAVHQHYLAVEVYTEKQD 379
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCH------PYPHEYVDT----------SKPC 163
+ AW + ESR+R+L +E Y C + YV +P
Sbjct: 380 EEQAWCSFCESRMRKL---VESLAYNPALCRLRVYTKKFSLSYVTAGEAPVGGQSNGQPP 436
Query: 164 AH-----CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK--PGMEICVSHI 216
A F++G ++ ++ I SVE FK + ++Y + K P M++ V+ +
Sbjct: 437 AQPSKFGACFYVGFDIDRRQL--RSREVSIDSSVEYFK-NNDLYRWNKRTPTMDVRVTPV 493
Query: 217 RRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQS 276
K +P VF E RT A+++ + E + + P +G ++
Sbjct: 494 LWKALPESVFEEMGGRTVA--RAARREFMKKKKEEEKKAEEAAAPSPSPSGDEGTHSQED 551
Query: 277 ----ISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSV 332
QK SL+ + + +G GS +P PD A+GG+V+ + + +
Sbjct: 552 GDDLTCSQKAASLA------TEMANGKGSISQPGSPDP------AADGGEVNGTDSVNNT 599
Query: 333 TSEVGSCEDVGNESVAGSSEGNNGSVEG----SNNPVSSQS 369
+ + G + ++ +VEG NP+S S
Sbjct: 600 PVKAKQVVSTTSPEKTGKRDRDDKAVEGVGGSDGNPLSDNS 640
>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 92/155 (59%), Gaps = 6/155 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +Y W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA-- 118
+N+++ST +++M +F+ G I ++ N W+ L + FF +Y+ YL IVAA
Sbjct: 313 HNITSSTQKIIMKEFRRGIDIMNQINGNNKTWANLLARHTFFHNYKFYLC--IVAATKGP 370
Query: 119 -DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
++ + W G VESRLR L +E T G HPY
Sbjct: 371 YEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPY 404
>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
Length = 630
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 143/302 (47%), Gaps = 38/302 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFS--VWDPRKNRRDKTHHMPIITPAYPCMNS 59
L+ +FF +++ W WP PV L ++A GF+ VWDPR N D++H MPIITPAYP NS
Sbjct: 251 LLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPIITPAYPHQNS 310
Query: 60 SYNVSTSTLRVM----MDQFQYGNTICEEV----ELNKAQWSALFEPYLFFESYRNYLQV 111
++NVS STL VM D ++ I ++ E N W+ LF FF Y++++ +
Sbjct: 311 TFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLWADLFTRTDFFNKYKHFIVL 370
Query: 112 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT---------SKP 162
A + W G VES +R+L +ER+ Y + H VD+ P
Sbjct: 371 SATADQQEQYQKWIGLVESNIRKLVNDLERNEYILI-----AHVNVDSIELDPAEEGQSP 425
Query: 163 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-------KLSINMYMFWKPGMEICVSH 215
C +F+GL EV ++ ++ F +S N Y P M + +
Sbjct: 426 RYVCRWFLGLSFHRCEV---KPNINLTSDIQRFTDLLHQAAISHNNYT---PDMRVEARY 479
Query: 216 IRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQ 275
++R + ++ PE RT + + R S+ + Q+ K+ ++ ES + E ++
Sbjct: 480 VKRHNLVKFLTPE-LARTLKLSKSKEGRKSKTNAQNQSNGNTKKAEESESKNSQSKENKE 538
Query: 276 SI 277
+
Sbjct: 539 KL 540
>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
Length = 557
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FF +YT W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M +++
Sbjct: 254 IVEKFFTIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCATH 313
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD- 120
N+++ST +V+M + + G I V + W+ LFE + FF Y+ YL + + A ADD
Sbjct: 314 NITSSTQKVIMKELERGAEIMSLVASGEKTWADLFERHSFFHDYKFYLCI-VAATLADDE 372
Query: 121 -LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G +ES+LR L +E T G HPY ++
Sbjct: 373 EHHKWSGMIESKLRILVQKLEV-TDGIALAHPYVKDF 408
>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF++++ W+WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VVLNRFFKIFSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD- 119
+N++ ST +++ +F G + ++ NK W LF+ + FF Y+ YL + D
Sbjct: 314 HNITESTKTIILKEFARGVQVTNDIFSNKGNWGDLFKKHTFFYEYKFYLTITASTRGTDE 373
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 159
+ L W G VES+LR L L +E G HPY + T
Sbjct: 374 EHLKWSGLVESKLRLLILKLEA-LPGINLAHPYTKPFEST 412
>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 92/155 (59%), Gaps = 6/155 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +Y W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VVVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA-- 118
+N+++ST +++M +F+ G I ++ N W+ L + FF +Y+ YL IVAA
Sbjct: 313 HNITSSTQKIIMKEFRRGIDIMNQISGNNKTWANLLARHTFFHNYKFYLC--IVAATKGS 370
Query: 119 -DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
++ + W G VESRLR L +E T G HPY
Sbjct: 371 YEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPY 404
>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 143/302 (47%), Gaps = 38/302 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFS--VWDPRKNRRDKTHHMPIITPAYPCMNS 59
L+ +FF +++ W WP PV L ++A GF+ VWDPR N D++H MPIITPAYP NS
Sbjct: 264 LLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPIITPAYPHQNS 323
Query: 60 SYNVSTSTLRVM----MDQFQYGNTICEEV----ELNKAQWSALFEPYLFFESYRNYLQV 111
++NVS STL VM D ++ I ++ E N W+ LF FF Y++++ +
Sbjct: 324 TFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLWADLFTRTDFFNKYKHFIVL 383
Query: 112 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT---------SKP 162
A + W G VES +R+L +ER+ Y + H VD+ P
Sbjct: 384 SATADQQEQYQKWIGLVESNIRKLVNDLERNEYILI-----AHVNVDSIELDPAEEGQSP 438
Query: 163 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-------KLSINMYMFWKPGMEICVSH 215
C +F+GL EV ++ ++ F +S N Y P M + +
Sbjct: 439 RYVCRWFLGLSFHRCEV---KPNINLTSDIQRFTDLLHQAAISHNNYT---PDMRVEARY 492
Query: 216 IRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQ 275
++R + ++ PE RT + + R S+ + Q+ K+ ++ ES + E ++
Sbjct: 493 VKRHNLVKFLTPE-LARTLKLSKSKEGRKSKTNAQNQSNGNTKKAEESESKNSQSKENKE 551
Query: 276 SI 277
+
Sbjct: 552 KL 553
>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 496
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 17/187 (9%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELG----------FSVWDPRKNRRDKTHHMPII 50
+L+++FF +Y W+WPN V L + + +VW+P N RDK H MPII
Sbjct: 254 VLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVANPRDKAHLMPII 313
Query: 51 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 110
TPAYP MNSSYNV +R++ ++ G I + + L A W+ LFE FF + Y+Q
Sbjct: 314 TPAYPAMNSSYNVGEPQMRLIREEIARGWRITKGISLGIANWANLFERSDFFWRFELYVQ 373
Query: 111 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY----PHEYVDTSKPCA-H 165
VDI A +A D W GW+ESR+R + ++ D ++ +P+ P+ Y+ ++ A
Sbjct: 374 VDISARSAADHRLWFGWIESRMR--SFLVCLDQIDMVEAYPFVNPLPNPYLTNAETGAVG 431
Query: 166 CAFFMGL 172
+FF+GL
Sbjct: 432 NSFFIGL 438
>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
Length = 552
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 95/155 (61%), Gaps = 6/155 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++ +FF++Y+ W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---N 117
+N++ ST +++M++F G I E+ + WS L E + FF Y+ YL V VAA N
Sbjct: 313 HNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCV--VAATKSN 370
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
A++ L + G VES+LR L +E+ G HPY
Sbjct: 371 AEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPY 404
>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
Length = 438
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 94/181 (51%), Gaps = 21/181 (11%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + W WP PV+L I+E L VW+P+ D+ H MPIITPAYP M +++
Sbjct: 165 IVSRFFIIMYQWTWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATH 224
Query: 62 NVSTSTLRVMMDQFQ----------------YGNTICEEVELNKAQWSALFEPYLFFESY 105
NV+ ST +M ++F+ G+ I + V + A WS LF + FF Y
Sbjct: 225 NVTASTQMIMTEEFKKGQLEFYSPGRYLLFLAGSEIVDRVIVGSADWSELFSKHDFFHKY 284
Query: 106 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 165
R YLQV +++ + W G VESR+RQL + +E + H ++ + H
Sbjct: 285 RYYLQVIASTGSSELQIKWAGTVESRIRQLVMKLEY-----VDSLTLAHPFIKGFEQVLH 339
Query: 166 C 166
C
Sbjct: 340 C 340
>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
Length = 557
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++ +FF++Y+ W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 258 VILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCAT 317
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL-QVDIVAANAD 119
+N++ ST +++M++F G I E+ + WS L E + FF Y+ YL V +NA+
Sbjct: 318 HNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCVVAATKSNAE 377
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
+ L + G VES+LR L +E+ G HPY
Sbjct: 378 EHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPY 409
>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
Length = 843
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 128/265 (48%), Gaps = 30/265 (11%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 62
+ +FF V+ WRWPNPVML +AELG VW+ + + P+ITPAYP MNS+ +
Sbjct: 294 LRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQA-ANMRQVAPMITPAYPAMNSTLS 352
Query: 63 VSTSTLRVMMDQFQYGNTICEEVELN-------------KAQWSALFEPYLFFESYRNYL 109
VS TL+++ ++F G+ I +++ + W LFEP FF +Y YL
Sbjct: 353 VSRQTLQILHEEFCRGHGIVDKLYKDYQRGAIDPADVESGGMWGELFEPSDFFIAYPYYL 412
Query: 110 QVDIVAANADDLLAWKGWVESRLRQL-TLMIERDT-YGKLQCHPYPHEY--VDTSKPCAH 165
+ I D AW G+VESRLR+L + M+ R K+Q P + D + H
Sbjct: 413 SLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKFDVCCADKTALLTH 472
Query: 166 C------AFFMGLQRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMFWKPGMEICVSHIRR 218
+F+G + ++ G+Q DI + F K + + PGM+I
Sbjct: 473 AQRANSITYFIGF--RVDKLRMRGEQLDIERQLSNFRKFELGRFHPLVPGMDILPKSFGV 530
Query: 219 KQIPPYVFPEGYKRTRHPRLASQQR 243
K++P F Y+ +LA+ +R
Sbjct: 531 KELPTICFDGTYEGG---KLAAMKR 552
>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 579
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 85/135 (62%), Gaps = 1/135 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FF++ W+WP PV+L I+ L VW+P+ N D+ H MPIITPAYP M +++
Sbjct: 261 IVMKFFKIIDKWQWPQPVLLKNIETGTLNLQVWNPQINHTDRRHIMPIITPAYPSMCTTH 320
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
NV+ ST+ V+ + + G I + V + KA+W LFE + FF SY+ YL + + +++
Sbjct: 321 NVTRSTMAVIHKELKRGGEIADRVMMGKAKWKDLFEKHTFFTSSYKYYLCIITASTSSEA 380
Query: 121 LLAWKGWVESRLRQL 135
W G+VES++R L
Sbjct: 381 QTKWAGFVESKVRLL 395
>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
Length = 655
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 116/217 (53%), Gaps = 27/217 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV R F +++ W WP+PV+L + D L VWDPR+ D+ H MPIITPA+P
Sbjct: 259 LVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITPAFPE 318
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NV+ ST V+ ++ IC ++ K++W+ALFE FF Y++++ + + A
Sbjct: 319 QNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHFIALIMAAP 378
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF-------- 168
N ++ L + G++ESR+R L +ER+ + H P+++ KP + F
Sbjct: 379 NEEEELNYGGFLESRIRLLVQSLERN-QDIIIAHNDPNKH----KPSPNAKFDVNPENKR 433
Query: 169 ----FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINM 201
F+GL E + + D+ ++ FK ++ +
Sbjct: 434 VTVWFIGL-----EFAEHAKTLDLTNEIQRFKTNVEL 465
>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
Length = 408
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAE--LGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
+V FF++ W WP+PVML A+++ W+P+ N D++H MPIITP+YP M S
Sbjct: 259 VVYHFFQILVHWSWPSPVMLKAVEDGPPLAATRPWNPKLNPTDRSHRMPIITPSYPSMCS 318
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
++NV ST R++M + + I +++ A W+ LF+ + FFE Y YLQ+ +VA N +
Sbjct: 319 THNVIPSTQRIIMGEIKQAAEIVQKIRTGSATWARLFQSHNFFEIYMQYLQITVVADNYN 378
Query: 120 DLLAWKGWVESRLRQLTL 137
L W G VE+RLRQL L
Sbjct: 379 LQLKWAGLVEARLRQLLL 396
>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
Length = 567
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 98/153 (64%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF++ + W+WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI-VAANAD 119
+N++ ST +V++++F G I ++ +K WS LF + FF Y+ YL + A+ +
Sbjct: 314 HNITDSTKKVILEEFSRGIQITNDIFSSKKSWSDLFNKHEFFYKYKFYLTITASTRASDE 373
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
+ L W G VES++R L L +E + K+ HP+
Sbjct: 374 EHLKWSGLVESKVRLLVLKLEALSGIKI-AHPF 405
>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
Length = 204
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 89/152 (58%), Gaps = 1/152 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FFR+ W WP P++L I++ L +W+P+ DK H MPIITPAYP M ++
Sbjct: 21 VIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSMCAT 80
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +++ + I +++ + WSALF+ + FF Y++YL + A A+
Sbjct: 81 HNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLTITAAAKTAEA 140
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VES+LR L +E L HP+
Sbjct: 141 QLKWAGLVESKLRHLVTRLELVDAIAL-AHPF 171
>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
Length = 599
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ T W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N+S ST V++ + Q G + +++ + W+ LF + FF + Y+ YLQ+ + +
Sbjct: 319 HNISLSTKAVILRELQRGGDMVDKIFAKQLTWNDLFTRHTFFSKDYKYYLQITASSKTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + HP+P +
Sbjct: 379 AESVWSGLVESKLRHLVGALDRKNIIAI-AHPFPKGF 414
>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I+E L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNQWNWPQPVLLKPIEEGPLQMKVWNPKIYHGDRYHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + + G I +++ L + W+ LF + FF + Y+ YL + + +
Sbjct: 319 HNVSLSTKAVLLRELKRGGDIVDKIFLGQLTWNDLFTRHTFFSQDYKYYLSITSSSRGKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + ++ HP+P +
Sbjct: 379 AQSVWSGLVESKLRHLVGALDRKSSIEV-AHPFPKGF 414
>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 624
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 154/358 (43%), Gaps = 75/358 (20%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V RFF + +MW+WP PV+L I+E L VW+P+ D+ H MPIITPAYP M S++
Sbjct: 256 IVRRFFLIMSMWKWPQPVVLKKIEEGNLNMRVWNPKIYPSDRAHKMPIITPAYPSMCSTH 315
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV T ++ ++ + G + + +A+W+ LF + FF Y+ YLQ + A+ DD
Sbjct: 316 NVMNCTFEIIQEELKRGQELIVRITNGEAKWADLFTKHTFFSQYQYYLQ---IIASCDDE 372
Query: 122 LAWKGW---VESRLRQLTLMIERDTYGKL-QCHPYPHEYVDT------------------ 159
K W VES+ RQL +E G L + HP+ + T
Sbjct: 373 EIQKKWSKTVESKGRQLVGKLEES--GTLARVHPFVKGFNKTYYTVTMQEHADIVLGNVP 430
Query: 160 -----------------SKPCAH-CAFFMGLQ--RKPGEVVQEG-QQFDIRGSVEEF-KL 197
+ H F++G++ R P V G ++ DI EF K
Sbjct: 431 PAVANRTEEEAKQIESNERQVIHTTTFYIGMEITRPPPSVTTTGPRKLDISIPTSEFMKT 490
Query: 198 SINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGL 257
+ + ++ M I V HI+ +P VF EG R R GL
Sbjct: 491 ARSWELYQNDIMGIAVRHIKNSALPDEVF-EGAPRPR--------------------KGL 529
Query: 258 KR-KKDPESVDQDGPE----KRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDK 310
KR K +D +G + +R S Q ++P L P+ + + S+ P K
Sbjct: 530 KRVAKSKVPIDGEGAQATKRRRPSDDGQTPTPVNPQSLVPAQLPAIPASDFAQAGPPK 587
>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
Length = 601
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+NVS ST V++ + + G + +++ + + +WS LF + FF + Y+ YL ++ + + +
Sbjct: 319 HNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + ++ HP+P +
Sbjct: 379 AQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
Length = 601
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+NVS ST V++ + + G + +++ + + +WS LF + FF + Y+ YL ++ + + +
Sbjct: 319 HNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + ++ HP+P +
Sbjct: 379 AQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
Length = 601
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+NVS ST V++ + + G + +++ + + +WS LF + FF + Y+ YL ++ + + +
Sbjct: 319 HNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + ++ HP+P +
Sbjct: 379 AQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
Length = 811
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 125/253 (49%), Gaps = 30/253 (11%)
Query: 2 LVSRFFRVYTMWRWPN-PVMLCAIDE----AELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV RFF VY++W W N PV+LC I E F VW+P+ N +D+ H +PIITPA+P
Sbjct: 473 LVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIITPAFPS 532
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICE----EVELNKAQWSALFEPYLFFESYRNYLQVD 112
MNS++NVS ST RV+ ++F I + + E++ + L L F S++++L++
Sbjct: 533 MNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEALHLVLKPLDFTSFKHFLELQ 592
Query: 113 IVAANADDLLAWKGWVESRLRQLTLMIERDTYG--------------KLQCHPYPHEYVD 158
+ A N W GWVES++R L +ER G + P P +
Sbjct: 593 VFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAAMTVRPIPCTF-S 651
Query: 159 TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY---MFWKPGMEICVSH 215
+P CA M + Q+ D+R + EF IN + +++ V H
Sbjct: 652 FQEPGWECASSMLVAL---NFAQQPCVIDLRPAAGEFVDLINQWPERAQLDGQIQLRVKH 708
Query: 216 IRRKQIPPYVFPE 228
+RR Q+P YV +
Sbjct: 709 LRRSQLPAYVLKQ 721
>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 795
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 125/253 (49%), Gaps = 30/253 (11%)
Query: 2 LVSRFFRVYTMWRWPN-PVMLCAIDE----AELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV RFF VY++W W N PV+LC I E F VW+P+ N +D+ H +PIITPA+P
Sbjct: 462 LVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIITPAFPS 521
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICE----EVELNKAQWSALFEPYLFFESYRNYLQVD 112
MNS++NVS ST RV+ ++F I + + E++ + L L F S++++L++
Sbjct: 522 MNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEALHLVLKPLDFTSFKHFLELQ 581
Query: 113 IVAANADDLLAWKGWVESRLRQLTLMIERDTYG--------------KLQCHPYPHEYVD 158
+ A N W GWVES++R L +ER G + P P +
Sbjct: 582 VFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAAMTVRPIPCTF-S 640
Query: 159 TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY---MFWKPGMEICVSH 215
+P CA M + Q+ D+R + EF IN + +++ V H
Sbjct: 641 FQEPGWECASSMLVALN---FAQQPCVIDLRPAAGEFVDLINQWPERAQLDGQIQLRVKH 697
Query: 216 IRRKQIPPYVFPE 228
+RR Q+P YV +
Sbjct: 698 LRRSQLPAYVLKQ 710
>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
Length = 568
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF + + W WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +V++ +F G I ++ NK W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L + +E T K+ HP+ +
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEVLTGIKI-AHPFTKPF 409
>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 94/152 (61%), Gaps = 3/152 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VS+FF++ W WP PV+L I+E L VW+P+ +DK H MPIITPAYP M S++
Sbjct: 273 VVSKFFQIMYRWEWPLPVLLKPIEEGPLAVRVWNPKIYPQDKAHRMPIITPAYPSMCSTH 332
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST V +F+ +++ L + +W+ LF+ FF Y+ YLQV I ++N D+
Sbjct: 333 NVTVSTQTVTTQEFERAAVTTDKIMLGREKWTVLFQKNDFFHRYKYYLQV-IASSNDDEK 391
Query: 122 -LAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G+VESRLRQL + +E + HPY
Sbjct: 392 QLMWAGFVESRLRQLVMKLELAENLDI-AHPY 422
>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 778
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 125/253 (49%), Gaps = 30/253 (11%)
Query: 2 LVSRFFRVYTMWRWPN-PVMLCAIDE----AELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV RFF VY++W W N PV+LC I E F VW+P+ N +D+ H +PIITPA+P
Sbjct: 443 LVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIITPAFPS 502
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICE----EVELNKAQWSALFEPYLFFESYRNYLQVD 112
MNS++NVS ST RV+ ++F I + + E++ + L L F S++++L++
Sbjct: 503 MNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEALHLVLKPLDFTSFKHFLELQ 562
Query: 113 IVAANADDLLAWKGWVESRLRQLTLMIERDTYG--------------KLQCHPYPHEYVD 158
+ A N W GWVES++R L +ER G + P P +
Sbjct: 563 VFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAAMTVRPIPCTF-S 621
Query: 159 TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY---MFWKPGMEICVSH 215
+P CA M + Q+ D+R + EF IN + +++ V H
Sbjct: 622 FQEPGWECASSMLVAL---NFAQQPCVIDLRPAAGEFVDLINQWPERAQLDGQIQLRVKH 678
Query: 216 IRRKQIPPYVFPE 228
+RR Q+P YV +
Sbjct: 679 LRRSQLPAYVLKQ 691
>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
Length = 557
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++++FF + W+WP+PV+L I++ L VW+P+ D+ H MPIITPAYP M S++
Sbjct: 255 VIAKFFTILYQWKWPHPVLLKEIEDGPLKVRVWNPKIYPSDRAHRMPIITPAYPSMCSTH 314
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV ST VM +F+ G I + + WS LF + FF Y++YLQ+ A+
Sbjct: 315 NVGPSTQEVMRQEFKRGMDILDGIHKGTTTWSQLFNKHEFFSKYKHYLQIIASGQTAESQ 374
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
W G VES++RQL +E G HP+
Sbjct: 375 KKWSGAVESKVRQLVSKLEL-VDGIELAHPF 404
>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
Length = 375
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 73/105 (69%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 106
NVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y+
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 372
>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
adhaerens]
Length = 405
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FF V+ W W PV+L + E++L + W P N D++ M IITP YP NS++
Sbjct: 234 IVQKFFLVFNQWNWQQPVLLTRMVESDLNLNGWTP-SNFSDRSQLMQIITPVYPHQNSTF 292
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST +++++ + G IC E+ L A+W+ FEP FF Y++Y+ + A + D+
Sbjct: 293 NVSKSTKTILLEEIERGLKICNEIFLRNAKWTDAFEPADFFGRYKHYIVLTAKATSEDNY 352
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR+L L +ER+ Y + H P Y
Sbjct: 353 KEWIGLVESKLRKLVLTLERNEYFDI-VHINPKSY 386
>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 569
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF + + W WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +V++ +F+ G I ++ NK W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L + +E K+ HP+ +
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
Length = 579
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + Q G I +++ L + +W LF + FF + Y+ YL + + +
Sbjct: 319 HNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES++R L ++R + HP+P +
Sbjct: 379 AESVWSGLVESKIRHLVGALDRKATIAI-AHPFPKGF 414
>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 677
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 130/256 (50%), Gaps = 39/256 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ RFF V W+WP + LC ++ +LG VW+ ++ H MPI+TPAYP MNSS+
Sbjct: 262 LLLRFFMVLANWKWPLAIQLCKTEDVKLGLEVWNANVGN-NRYHVMPILTPAYPSMNSSF 320
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNK--AQWSALFEPYLFFESYRNYLQVDIVAANAD 119
NVST +L VM +F+ I +E+ LN+ +W LFE FF ++YL VD+ N +
Sbjct: 321 NVSTHSLAVMKQEFERALKIVQEI-LNRGAVEWDPLFESSDFFAVQQHYLAVDVYTTNRE 379
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCH------PYPHEYV---------------- 157
D AW + ESR+R+L IE Y + CH +P +V
Sbjct: 380 DEQAWCSFCESRIRKL---IESLAYIPMLCHLRAFPKRFPLSFVGQDQDEKIETPTDRNN 436
Query: 158 ---DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK--PGMEIC 212
+T K A F++G ++ ++ I SV+ FK + ++Y + K M++
Sbjct: 437 EEKETFKYGA--CFYVGFDIDRRQL--RSREVSIDSSVDYFKHN-DLYRWNKRSDSMDVR 491
Query: 213 VSHIRRKQIPPYVFPE 228
++ + K +P YVF E
Sbjct: 492 ITPVLWKNLPDYVFEE 507
>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 395
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 62
V +FF V+ W+WP PV L D LGF VWD R N +D+ H M IITPAYP NS+++
Sbjct: 244 VHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAYPQQNSTFH 303
Query: 63 VSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL 122
VS+ST +VM+++F I +E+ L KA W LFE FF YR ++ + + + N DD L
Sbjct: 304 VSSSTRKVMLNEFNSDMQITDEIMLGKAGWDKLFEAPSFFFKYRYFIVLLVTSNNTDDHL 363
Query: 123 AWKGWVESRLRQLTLMIER 141
ES++R L +ER
Sbjct: 364 E-----ESKIRYLIQNLER 377
>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
Length = 557
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 95/161 (59%), Gaps = 6/161 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++ +FF +Y+ W WP PV+L I++ L VW+P+ D+ H MP+ITPAYP M ++
Sbjct: 253 VIIEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPKLYAPDRQHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---N 117
+N+++ST +V++ +FQ G I + WS LFE + FF Y+ YL IVAA N
Sbjct: 313 HNITSSTQKVILSEFQRGIEIMNGINSGSKTWSDLFERHDFFFRYKFYLC--IVAATKSN 370
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 158
+++ L + G VES+LR L +E G HPY + D
Sbjct: 371 SEEHLKYGGMVESKLRLLVQKLEL-VEGIELAHPYVKTFED 410
>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
Length = 569
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF + + W WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +V++ +F+ G I ++ NK W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDFFYRYKFYLEITAYTRGSDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L + +E K+ HP+ +
Sbjct: 374 QHLKWGGLVESKVRLLIMKLEVLAGIKI-AHPFTKPF 409
>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
Length = 583
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 150/326 (46%), Gaps = 49/326 (15%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+NVS ST V++ + + G + +++ + + +WS LF + FF + Y+ YL ++ + +
Sbjct: 319 HNVSMSTKSVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTTKE 378
Query: 120 DLLAWKGWVESRLRQLTL----------MIERDTYG--KLQCHPYPHEYVDTSKPCAHCA 167
W G VES+LR L I+ G K Q D + H A
Sbjct: 379 AQAIWSGLVESKLRHLGFERVHICKTDAEIDAVKAGSMKYQADDTKTATTDETNDPTHVA 438
Query: 168 -----------------------------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLS 198
+++GL+ KP + DI FK +
Sbjct: 439 AAENANENVAIAEAEKPAEENKYTVYTTTYYIGLELKP-LAPGASRSLDISSDTHMFKNT 497
Query: 199 INMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGL 257
+ ++PG+ ++ +SH+R +P VF G R P+ +++ ++ ++ +T +
Sbjct: 498 CTSWAQYQPGVNDLNISHVRNYDLPDDVFQPGEVRPTRPKKKVVKKAEQSVSQKRTIDAV 557
Query: 258 KRKKDPES-----VDQDGPEKRQSIS 278
++ PES V Q+G + +I+
Sbjct: 558 DGQELPESASKRHVSQNGMVTQATIA 583
>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
Length = 599
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + Q G I +++ L + W+ LF + FF Y+ YL + + +
Sbjct: 319 HNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFTRDYKYYLSITASSRTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES++R L ++R + + HP+P +
Sbjct: 379 AEAVWSGLVESKIRHLVGALDRKSTIAV-AHPFPKGF 414
>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
Length = 569
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 93/154 (60%), Gaps = 4/154 (2%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF++ + W+WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST V++ + G + ++ K W+ LF + FF Y+ YL + A DD
Sbjct: 314 HNITESTKAVILKELNRGIQVTNDIFAYKKTWADLFTKHDFFFQYKYYLTI-TAATRGDD 372
Query: 121 --LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VES+LR LTL +E KL HP+
Sbjct: 373 EEHLKWSGLVESKLRLLTLKLETIPGIKL-AHPF 405
>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
Length = 597
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N+S ST V++ + Q G I +++ + + W LF + FF Y+ YL + + +
Sbjct: 319 HNISMSTKAVILRELQRGGDIVDKIFMKQLSWQDLFARHTFFTHDYKYYLSITASSKTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + HP+P +
Sbjct: 379 AESVWSGLVESKLRHLVGALDRKPIVAV-AHPFPKGF 414
>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
Length = 609
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + Q G I +++ L + W+ LF + FF Y+ YL + + +
Sbjct: 319 HNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFTRDYKYYLSITASSRTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES++R L ++R + + HP+P +
Sbjct: 379 AEAVWSGLVESKIRHLVGALDRKSTIAV-AHPFPKGF 414
>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
Length = 566
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 123/269 (45%), Gaps = 41/269 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VS+FF + W WP PVML I+E ++G VW+P+ D+ H MPIITPA+P M +++
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
V STLR+M ++F + I +++ NK W ALFE + FF + ++ YL V + +
Sbjct: 323 TVMPSTLRIMKEEFGRADKILQDIFANKKDWKALFERHTFFTKDHKYYLSVVAASRTKEA 382
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY------PHEYVDTS-KPCAHCAF----- 168
+ G V+S++R + I+ G PY H D K A +
Sbjct: 383 NSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRITDDQFKEVAQGSLDYHIP 442
Query: 169 ------------------------FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI-NMYM 203
++GL GE + DI V +FK I + +
Sbjct: 443 KSEMDAEGALEANGDTTVVYTTTFYIGLTLPTGEAT---KSLDISYPVSQFKSYITDSDL 499
Query: 204 FWKPGMEICVSHIRRKQIPPYVFPEGYKR 232
F + M + V H R +P VF EG R
Sbjct: 500 FNEDLMSVKVVHTRSSALPDDVFVEGETR 528
>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 138/326 (42%), Gaps = 65/326 (19%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF V WRWP PV+L I L VW+P+ + D H MP+ITPAYP M ++
Sbjct: 259 VIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N++ S++ ++ + + G I EE+ + K WS LF + FF + YR Y+ V + N +
Sbjct: 319 FNITRSSMTIIQRELRRGLEISEEIMVGKRPWSDLFVKHTFFTQGYRYYISVVSASKNKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----------------------- 156
W G+VES++R L +E+ + L HP+ Y
Sbjct: 379 AHKVWSGYVESKVRMLVQKLEQHSSIAL-AHPFNKGYDRRHLCKNDHEIEQVQEGSLEFV 437
Query: 157 --------------------VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 196
D+S P + + E+ + + D+ V+EFK
Sbjct: 438 IKDEGKGQTSEEKNPKLEENQDSSAPTSPVEVYTTTHYIGIELEEGAKSLDLSYQVDEFK 497
Query: 197 LSINMYMFW----KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ 252
+ + + +P + + V H+R +P VF G E + +
Sbjct: 498 VLCTSWKKYEDELRPLVSLGVQHVRNFNLPDDVFEAG----------------ETKPQKK 541
Query: 253 TGSGLKRKKDPESVDQDGPEKRQSIS 278
+ L KK + D P KRQ S
Sbjct: 542 SAKSLASKKRGPTEDNTPPAKRQQAS 567
>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
24927]
Length = 1294
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++VS+FFR+ W WP PV+L I++ L VW+PR DK H MPIITPAYP M S+
Sbjct: 943 VIVSKFFRILGQWAWPQPVLLKPIEDGPLNVRVWNPRLYPSDKNHLMPIITPAYPSMCST 1002
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N++ ST ++ + I + + K W LFE + FF + Y+ YL V+ A +
Sbjct: 1003 HNITPSTKAAILGEMAKAADIVDRIITGKGNWKQLFERHTFFTKDYKYYLAVNASAKEQE 1062
Query: 120 DLLAWKGWVESRLRQLTLMIE 140
+ W G VES++R L + +E
Sbjct: 1063 ASVKWSGLVESKIRHLVMKLE 1083
>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
Length = 400
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
NVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y+ Y+ +++A A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKYK-YVFYNLLAMFA 380
>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
Length = 568
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF + + W WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +V++ +F G I ++ NK W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L + +E K+ HP+ +
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
Length = 580
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N+S ST V++ + Q G I +++ L + W+ LF + FF + Y+ YL + + +
Sbjct: 319 HNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFTQDYKYYLSITASSRTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES++R L ++R + HP+P +
Sbjct: 379 AEAVWSGLVESKIRHLVGALDRKPTIAV-AHPFPKGF 414
>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
Length = 555
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +Y+ W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD- 119
+N+++ST +V++ +FQ G + ++ + K WS L E + FF Y+ YL IVAA
Sbjct: 313 HNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLC--IVAATRST 370
Query: 120 --DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
+ L + G VES+LR L +E G HPY +
Sbjct: 371 YAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPYVKSF 408
>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
adenylyltransferase a
gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
Length = 555
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FF +Y+ W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD- 119
+N+++ST +V++ +FQ G + ++ + K WS L E + FF Y+ YL IVAA
Sbjct: 313 HNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLC--IVAATRST 370
Query: 120 --DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
+ L + G VES+LR L +E G HPY +
Sbjct: 371 YAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPYVKSF 408
>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228305|prf||1802393A poly(A) polymerase
Length = 568
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF + + W WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +V++ +F G I ++ NK W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L + +E K+ HP+ +
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
Length = 394
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
NVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y+ Y+ +++A A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKYK-YVFYNLLAMFA 380
>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
Length = 537
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF + + W WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +V++ +F G I ++ NK W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L + +E K+ HP+ +
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
Conformation
Length = 530
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF + + W WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +V++ +F G I ++ NK W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L + +E K+ HP+ +
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
Oligo(A)
Length = 525
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF + + W WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 250 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 309
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +V++ +F G I ++ NK W+ LFE FF Y+ YL++ +D+
Sbjct: 310 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 369
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L + +E K+ HP+ +
Sbjct: 370 QHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 405
>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
Length = 599
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NVS ST V++ + Q G + +++ + + W+ LF + FF + Y+ YL++ + +
Sbjct: 319 HNVSMSTKNVILRELQRGGDMVDKIFMKQLTWNDLFARHSFFTKDYKYYLRITAASTTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES++R L ++R + HP+P +
Sbjct: 379 ADSVWSGLVESKIRHLVGALDRKPTIAV-AHPFPKGF 414
>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
Length = 593
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V +FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M ++
Sbjct: 276 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 335
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N+S ST V++ + + G + + + + + +WS LF + FF Y+ YL ++ + +
Sbjct: 336 HNISMSTKAVILRELRRGGDMVDNIFVGQRRWSDLFARHSFFSGDYKYYLSINSTSTTKE 395
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G VES+LR L ++R + ++ HP+P +
Sbjct: 396 AQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 431
>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
Length = 546
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF + + W WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ ST +V++ +F G I ++ NK W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L + +E K+ HP+ +
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
Length = 559
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
M+V +FF V + W+WP + L ++ L WDP NR DK H MP+ITPAYPCMNS+
Sbjct: 259 MIVQKFFFVISNWQWPRAITLQTREKGPLAEKEWDPTLNRWDKMHLMPVITPAYPCMNST 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
++ ST V++ + + G+ I EE+ K QW LF FF E+Y++Y+ V +
Sbjct: 319 MSIMPSTKAVLLTELKRGHDIMEEIYGGKKQWKDLFVKQKFFSEAYQHYICVITAGKTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIER 141
AW G V+SRLR+L IE+
Sbjct: 379 AQQAWSGLVQSRLRRLIQGIEQ 400
>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
Length = 593
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 135/311 (43%), Gaps = 68/311 (21%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF V + WRWP PV+L I+ L VW+P+ + D H MPIITPAYP M ++
Sbjct: 263 VIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLMPIITPAYPSMCAT 322
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N++ S++ ++ + Q G I E+V + K W+ LF + FF + Y+ Y+ V + D
Sbjct: 323 FNITRSSMTIIKRELQRGLEITEQVMVGKQSWNDLFVKHTFFTTGYKYYISVVSASKARD 382
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV---------------------- 157
W G++ES++R L +E + L HP+ Y
Sbjct: 383 AHKLWSGYIESKVRMLVQKLEHHPHIAL-AHPFVKGYSRRHLCKDETQIEQVQEGSLDFV 441
Query: 158 ----------------------------DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIR 189
TS ++GL+ + G + D+
Sbjct: 442 VSDDVQLDGESNEQNGEQKEAAEGEAEKQTSSEVFTTTHYIGLELEEG-----AKSLDLS 496
Query: 190 GSVEEFKLSINMYMFW----KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 245
V+EFK+ + + KP + I V H+R +P VF K+ Q++SS
Sbjct: 497 YQVDEFKVLCTAWQKYQDELKPLVSIGVQHVRNFNLPDDVFGADEKK-------PQKKSS 549
Query: 246 ENGNEYQTGSG 256
+ N + G+
Sbjct: 550 KGANGKKRGAA 560
>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
Length = 375
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 109/230 (47%), Gaps = 47/230 (20%)
Query: 18 PVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 77
PV L D LGF VWDPR N + + MPIITPAYP NS+++VS+ST ++M+++F
Sbjct: 187 PVFLKRPDTVNLGFQVWDPRVNVQGRFDLMPIITPAYPQQNSTFHVSSSTRKIMLNEFNR 246
Query: 78 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTL 137
G I +E+ L KA W LFE FF YR ++ + + + N DDLL W G VES++R L
Sbjct: 247 GMQITDEIMLGKAGWDKLFEAPSFFFKYRYFIVLLVTSNNTDDLLEWCGLVESKIRYLIQ 306
Query: 138 MIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKL 197
+ER + L AH K E ++G + + R
Sbjct: 307 NLERILHINL----------------AHVHI------KVLETTRDGMKTEAR-------- 336
Query: 198 SINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSEN 247
H+RRKQ+ Y+ P KR R + ++R N
Sbjct: 337 -----------------HVRRKQLNQYLDPNLLKRERKNQRLLRRRKCAN 369
>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
Length = 608
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF V + WRWP PV+L I+ L VW+P+ + D H MPIITPAYP M ++
Sbjct: 259 VIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N++ S++ ++ + Q G I E+V + K WS LF + FF + Y+ Y+ V + +
Sbjct: 319 FNITRSSMSIIKRELQRGLEISEQVMVGKQPWSDLFVKHTFFTTGYKYYISVVSASKAKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G++ES++R L +E+ + L HPY Y
Sbjct: 379 PHKLWAGYIESKVRMLVQKLEQHPHIAL-AHPYVKGY 414
>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
Length = 407
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++ +FF + W WP + L +E LG VWDPR RD MP+ITPAYP MNS Y
Sbjct: 259 VLLKFFILLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGTRDSLALMPVITPAYPAMNSLY 318
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVEL----NKAQWSALFEPYLFFESYRNYLQVDIVAAN 117
NV STL VM ++F +C +WS LF P FF + Y+Q+++ A +
Sbjct: 319 NVQRSTLEVMTEEFAAAADVCTSFLHCPPGKPIEWSRLFTPVPFFTQHSFYIQLEVSADS 378
Query: 118 ADDLLAWKGWVESRLRQLTLMIE 140
DL+ W GWV SR+R+L +E
Sbjct: 379 EGDLVLWDGWVSSRIRRLVRNLE 401
>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FF + W WP+P+ L A ++ LG + WDP N DK H MP+ITPAYPCMNS++
Sbjct: 260 IVQKFFWLLHTWAWPSPIYLQAREKGPLGKTEWDPTTNPGDKRHLMPVITPAYPCMNSTH 319
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
++ ST+ V+ + G I E+ K W LF + FF ++Y++Y+ + A D
Sbjct: 320 TITPSTMAVLKKESDRGEKIMNEIYEGKRPWKDLFAKHTFFSDAYQHYICIITAARTKDA 379
Query: 121 LLAWKGWVESRLRQLTLMIER 141
AW G V+SR+++L IE+
Sbjct: 380 QQAWSGLVQSRVKRLLAGIEQ 400
>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
8797]
Length = 576
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 93/163 (57%), Gaps = 12/163 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF++Y+ W+WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VIINRFFKIYSDWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA--NA 118
+N++ ST +++ + Q G I ++ NK W+ LF+ + FF Y+ YL +
Sbjct: 314 HNITESTKSIILQELQRGIQITNDIFTNKKTWNDLFKRHDFFYKYKFYLTITASTREHTG 373
Query: 119 DD---------LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
DD L W G VES+ R L + +E G HPY
Sbjct: 374 DDGEKTGGDEQHLKWSGLVESKARLLVMKLEA-LEGIKVAHPY 415
>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 328
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 83/145 (57%), Gaps = 9/145 (6%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 62
V +FF V++ W+W +PV L D LGF VWDPR N + + H MPIITPAYP
Sbjct: 181 VHKFFLVFSRWKWSHPVFLKRPDTVNLGFQVWDPRVNVQGRFHLMPIITPAYP------- 233
Query: 63 VSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL 122
ST +VM+++F G I +E+ L KA W LFE FF YR + + + + N DDLL
Sbjct: 234 --HSTRKVMLNEFSRGMQITDEIMLGKAGWDKLFEAPSFFFKYRYIIVLLVTSNNTDDLL 291
Query: 123 AWKGWVESRLRQLTLMIERDTYGKL 147
W VES++R L +ER + L
Sbjct: 292 EWCELVESKIRYLIQNLERILHINL 316
>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 94/157 (59%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++++RFF + + W WP PV+L I++ L VW+P+ +D++H MP+ITPAYP M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+N++ T +V++ +F G I ++ NK W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITECTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
L W G VES++R L + +E K+ HP+ +
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
Length = 487
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 23/209 (11%)
Query: 2 LVSRFFRVYTMWRWPN-PVMLCAIDEAELGFSVWDPRKNRRDKTHH--MPIITPAYPCMN 58
L+ RFF +++ W+W PV++ DE +W + + H M I+TP YP +N
Sbjct: 250 LIERFFFIFSQWKWNELPVVIQKCDE------IWRNSLFEQQQKQHNVMSILTPVYPYIN 303
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
S+YNVS T ++ +Q + N I +++ L++ QWS L + FF+ Y YLQ+ ++ N
Sbjct: 304 SAYNVSNCTFTIIEEQLKLANIIMQKICLSELQWSDLLKKIQFFDIYYTYLQIRALSKNK 363
Query: 119 DDLLAWKGWVESRLRQLTLMI-ERDTYGKLQCHPYPH----EYV-----DTSKPCAHC-- 166
DDL+ WK +ES+LR+L M+ E D ++ H YP +YV DT +
Sbjct: 364 DDLIQWKSHIESKLRKLNKMLDEGDVNKAIEFHLYPKSFQTDYVQGDENDTPGSLFNFSE 423
Query: 167 AFFMGLQRKPGEVVQEGQQFDIRGSVEEF 195
+FF G++ K E+V+E + DI + +F
Sbjct: 424 SFFYGIRIKDEELVKE--KLDIENIIRQF 450
>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
Length = 1333
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 138/269 (51%), Gaps = 23/269 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV + F V++ W +P+P++LC D L W +N D+ H MPIITPA+P
Sbjct: 1068 LVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWG--RNHADRFHLMPIITPAFPE 1125
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NVS ST+ V+ + IC +V K W LFE F+ Y++++ + + A
Sbjct: 1126 QNSTHNVSRSTMEVIKKEMADALIICNDVFEGKCDWKFLFEEVNFYSQYKHFVVMKLDAK 1185
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
+ ++ G++ESRLR L ER+ KL H P + TSK + +F+GL+
Sbjct: 1186 KEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPKKCQPTSK--SQSLWFIGLEF-- 1240
Query: 177 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRKQIPPYVFPEGYKRT 233
EVV + D+ ++ FK ++N+ G +E+ +S+++R Q+ Y+ K+
Sbjct: 1241 DEVV---KNMDLTREIDNFKWNLNVQAKQIAGFEDVELDISYVKRSQLIKYLPAAELKK- 1296
Query: 234 RHPRLASQQRSSENGNEYQTGSGLKRKKD 262
R + S+E+ E GLKRK D
Sbjct: 1297 --GRFFVAKGSAEDNKE--NAGGLKRKCD 1321
>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
Length = 552
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++ +FF++Y+ W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VILEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---N 117
+N+++ST +++M +F G I V + WS L E + FF Y+ YL V VAA N
Sbjct: 313 HNITSSTQKIIMSEFDRGVEIMNGVVSGQKSWSDLLERHDFFHKYKFYLCV--VAATKSN 370
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
++ + G VES+LR L +E+ G HPY +
Sbjct: 371 TEEHSKYSGMVESKLRLLVQKLEQ-VEGVELAHPYVKSF 408
>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Otolemur garnettii]
Length = 735
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 120/229 (52%), Gaps = 13/229 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV FF V++ W PNPV++ ++ L VWD R N D+ PIITPAYP NS+Y
Sbjct: 269 LVHXFFLVFSKWEXPNPVLVKQPEKCNLNLPVWDSRVNPSDRYQFAPIITPAYPQQNSTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
+ S ST V++++F+ +I + + L+K + S LFE +FF+ Y++Y+ + A
Sbjct: 329 SASISTQMVVVEEFKXSLSITDXL-LSKVEXSKLFEAPIFFQKYKDYIVLLAGAPTEKQR 387
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
L W G VES++ L +E++ + L Q P P E D + C + +GL K
Sbjct: 388 LEWVGLVESKIXILIGSLEKNEFITLAHVNPQAFPAPKENPDKKEFCT--VWVIGLVFKK 445
Query: 177 GEVVQE---GQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 221
E + DI+ + ++ + N MF + M I +H++RKQ+
Sbjct: 446 TENYKNLSVNLXHDIQAFTDTVYRQARNSKMF-EVDMRIAATHVKRKQL 493
>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
Length = 598
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FFR+ W+WP PV+L I L VW+PR + D H MPIITPAYP M +++
Sbjct: 261 VVLKFFRIMEKWQWPTPVLLTHIASGPLQVKVWNPRIYKHDSFHLMPIITPAYPSMCATH 320
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
N++ ST ++ + + G I +++ K QW LF + FF E Y+ YL V + +
Sbjct: 321 NITRSTKEIIQRELKRGGNITDQIMSGKLQWKDLFAKHTFFTEGYKYYLSVISASTTREA 380
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
W G VES++R L L +E L HP+
Sbjct: 381 QNIWGGLVESKIRLLVLSLEGHDSIAL-AHPF 411
>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
Length = 551
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 93/155 (60%), Gaps = 6/155 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++S+FF + W WP PV+L I++ L VW+PR DK H MP+ITPAYP M ++
Sbjct: 252 VIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPAYPSMCAT 311
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---N 117
+N++ ST +V++ +FQ G+ I E+ +WS LF + FF Y+ YL V +AA +
Sbjct: 312 HNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDFFRRYKFYLTV--IAATKGS 369
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
+++ + G VES+LR L +E + L HP+
Sbjct: 370 SEEQKKFAGMVESKLRLLVQKLENNENINL-AHPF 403
>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
Length = 908
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 93/155 (60%), Gaps = 6/155 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++S+FF + W WP PV+L I++ L VW+PR DK H MP+ITPAYP M ++
Sbjct: 609 VIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPAYPSMCAT 668
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---N 117
+N++ ST +V++ +FQ G+ I E+ +WS LF + FF Y+ YL V +AA +
Sbjct: 669 HNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDFFRRYKFYLTV--IAATKGS 726
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
+++ + G VES+LR L +E + L HP+
Sbjct: 727 SEEQKKFAGMVESKLRLLVQKLENNENINL-AHPF 760
>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
Length = 620
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 18/176 (10%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF V WRWP PV+L ID L VW+P+ + D H MP+ITPAYP M ++
Sbjct: 259 VIVNKFFLVIGQWRWPQPVLLKPIDSGPLPVRVWNPKVYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N++ S++ ++ + + G I E++ + K WS LF + FF S YR Y+ V + + +
Sbjct: 319 FNITRSSMTIIQRELRRGLEISEQIMVGKRPWSDLFVKHTFFTSGYRYYISVISASKDKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 175
W G+VES++R L KL+ HP S AH AF G R+
Sbjct: 379 AHKIWSGYVESKVRMLV--------QKLEQHP--------SIALAH-AFNKGYDRR 417
>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
Length = 386
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 71/108 (65%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L ++ L VWDPR D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 109
NVS ST +M+++F+ G I +E+ NKA WS LFE FF+ Y+ L
Sbjct: 327 NVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
1558]
Length = 648
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
+V++FF ++ W WPNPV+L I+ + SVW+P+ +RRD H MPIITPAYP M +
Sbjct: 254 IVAKFFPIFYQWGWPNPVLLKKIESGPPNMHHSVWNPKLDRRDMAHRMPIITPAYPSMCT 313
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNK-AQWSALFEPYLFFESYRNYLQVDIVAANA 118
++N++ ST+ V+ ++ + + + N + W LFE FF Y++Y+QV A+ +
Sbjct: 314 THNITASTMSVIKNEMLRAMQVTDRIMSNPGSSWMELFEQIDFFSMYKSYVQVIASASTS 373
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 151
+ + W G VESR+R L +E ++ + HP
Sbjct: 374 EGIKDWGGTVESRIRTLVQDLE-NSDNIITAHP 405
>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
Length = 526
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 138/267 (51%), Gaps = 23/267 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCA-----IDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV + F V++ W +P+P++LC D L W +N D+ H MPIITPA+P
Sbjct: 261 LVQKVFYVFSTWNYPSPIVLCMPTRERSDMLALDNLCWG--RNHADRFHLMPIITPAFPE 318
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NVS ST+ V+ + IC ++ K+ W LFE F+ Y++++ + + A
Sbjct: 319 QNSTHNVSRSTMEVIKKEMADALVICNDIFEGKSDWKFLFEEVNFYSQYKHFVVMKLDAK 378
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
+ ++ G++ESRLR L ER+ KL H P + TSK A +F+GL+
Sbjct: 379 KEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPKKCQPTSK--AQSIWFIGLEFD- 434
Query: 177 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRKQIPPYVFPEGYKRT 233
EVV + D+ ++ FK ++N+ G +E+ +S+++R Q+ Y+ K+
Sbjct: 435 -EVV---KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDISYVKRSQLIKYLPAAELKKG 490
Query: 234 RHPRLASQQRSSENGNEYQTGSGLKRK 260
R + SSE+ E GLKRK
Sbjct: 491 ---RFFVAKGSSEDNKE--NAGGLKRK 512
>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 575
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 149/296 (50%), Gaps = 51/296 (17%)
Query: 2 LVSRFFRVYTMWRW--PNPVMLCAI--DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCM 57
L++ FF+ YT W W NP++L I D + F++ +T MPIITPA+P M
Sbjct: 283 LLNYFFKAYTQWEWNYQNPILLTEIKNDRNSVNFTIEADLFYEEKQTDLMPIITPAFPSM 342
Query: 58 NSSYNVSTSTLRVMMDQFQYGNTICEEV------------ELNKAQWSALFEPYLFFESY 105
N+++NVS ST R M+ +F+ G I E + E+N W LF+ + FF+SY
Sbjct: 343 NATFNVSHSTKRAMLIEFEKGLKITEALLARNEDGSKLHQEMN---WRRLFKKFNFFKSY 399
Query: 106 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTY---GKLQCHPYPHEY---VDT 159
+++Q+ I++ +A+D W G++ES++R+L +E+ G ++ P+P Y +
Sbjct: 400 VHFIQIQILSKSAEDHKKWTGFIESKIRKLLQQLEKLNELKGGCMEFRPWPKSYHLENNL 459
Query: 160 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK------LSIN---MYMFWKPGME 210
P +F G++ K E + + D+ +++ F +S++ M M ++
Sbjct: 460 DFPMDDTYYF-GIRIKKNESDAQ-MRIDLTDTIKIFYKKLREWISVDHKLMQMIVDKLVD 517
Query: 211 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESV 266
I +++IRR+ +P + P G ++N NE + G +++ D + +
Sbjct: 518 IKINYIRRETLPDVIRPRG---------------AQNLNEQDSALGKRQRVDSQRI 558
>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
Length = 528
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 137/269 (50%), Gaps = 23/269 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCA-----IDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV + F V++ W +P+P++LC D L W +N D+ H MPIITPA+P
Sbjct: 263 LVQKVFYVFSTWNYPSPIVLCMPTRERADMLTLDNLCWG--RNHADRFHLMPIITPAFPE 320
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NVS ST+ V+ + IC ++ K W LFE F+ Y++++ + + A
Sbjct: 321 QNSTHNVSRSTMEVIKKEMADALVICNDIFDGKCDWKFLFEEVNFYSQYKHFVVMKLDAK 380
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
+ ++ G++ESR RQL ER+ G H P + TSK A +F+GL+
Sbjct: 381 KEETENSYGGFLESRFRQLIGAFERNR-GIKMAHLNPKKCQPTSK--AQSLWFIGLEF-- 435
Query: 177 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRKQIPPYVFPEGYKRT 233
+VV + D+ ++ FK ++N+ G +E+ +S+ +R Q+ Y+ P K+
Sbjct: 436 DDVV---KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDISYAKRSQLIKYMPPAELKKG 492
Query: 234 RHPRLASQQRSSENGNEYQTGSGLKRKKD 262
R + S+E+ E GLKRK D
Sbjct: 493 ---RFFVAKGSAEDNKE--NAGGLKRKCD 516
>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
Length = 577
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VS+FF + W WP PV+L I+E +G VW+P+ D++H MPIITPA+P M S++
Sbjct: 261 IVSKFFSLMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYHGDRSHLMPIITPAFPSMCSTH 320
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
V STLR+M ++FQ + I + + W ALFE + FF + ++ YL + + +
Sbjct: 321 TVMPSTLRIMQEEFQRADQIMQHIFAGTKTWDALFERHSFFTKDHKYYLTIVAASRTQEA 380
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 153
+ G V+S++R + I+ G PYP
Sbjct: 381 HERFNGLVQSKVRHIVKGIDDGQTGIDTARPYP 413
>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
Length = 435
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 71/108 (65%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L ++ L VWDPR D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 109
NVS ST +M+++F+ G I +E+ NKA WS LFE FF+ Y+ L
Sbjct: 327 NVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
Length = 436
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 71/108 (65%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L ++ L VWDPR D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 109
NVS ST +M+++F+ G I +E+ NKA WS LFE FF+ Y+ L
Sbjct: 327 NVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
Length = 436
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 71/108 (65%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L ++ L VWDPR D+ H MPIITPAYP NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 109
NVS ST +M+++F+ G I +E+ NKA WS LFE FF+ Y+ L
Sbjct: 327 NVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 612
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF V + WRWP PV+L I+ L VW+PR + D H MP+ITPAYP M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPRVYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N++ S+++V+ + I E + + K WS LF + FF + Y+ Y+ V A + +
Sbjct: 319 FNITRSSMKVINRELSRALQISESIMVGKRPWSDLFVKHTFFTQGYKYYISVISSAKSKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIER 141
D W G+VES++R L +E+
Sbjct: 379 DHKIWSGYVESKVRMLVQKLEQ 400
>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
Length = 527
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 138/269 (51%), Gaps = 23/269 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV + F V++ W +P+P++LC D L W +N D+ H MPIITPA+P
Sbjct: 262 LVQKVFYVFSTWNYPSPIVLCMPTRERPDMLTLDNLCWG--RNHADRFHLMPIITPAFPE 319
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NVS ST+ V+ + IC +V K W LFE F+ Y++++ + + A
Sbjct: 320 QNSTHNVSRSTMEVIKKEMADALVICNDVFEGKCDWKHLFEELNFYSQYKHFVVLKLDAK 379
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
+ ++ G++ESRLR L ER+ KL H P + TSK A +F+GL+
Sbjct: 380 KEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPKKCQPTSK--AQSLWFIGLEF-- 434
Query: 177 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRKQIPPYVFPEGYKRT 233
EVV + D+ ++ FK ++N+ PG +E+ +S+++R Q+ Y+ K+
Sbjct: 435 DEVV---KNMDLTREIDNFKWNLNVQAKQIPGFEDVELDISYVKRSQLIKYLPAAELKKG 491
Query: 234 RHPRLASQQRSSENGNEYQTGSGLKRKKD 262
R + S + N+ G LKRK D
Sbjct: 492 RF----HVAKGSSDDNKENAGV-LKRKCD 515
>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
Length = 604
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF + W WP PV+L A++E L VW+P+ R D+ H MPIITPAYP M ++
Sbjct: 262 VIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLMPIITPAYPSMCAT 321
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N++ S + V+ + Q G I + V L+K W LF + FF S Y+ Y+ V + +
Sbjct: 322 FNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTFFTSGYKYYISVVTTSTTKE 381
Query: 120 DLLAWKGWVESRLRQLTLMIER 141
W G+VES++R L +E+
Sbjct: 382 AHKIWSGYVESKVRVLVQGLEQ 403
>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
Length = 544
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++ +FFR+ + W+WP PV+L AI +L VW+PR + D H MPIITP+YP M +++
Sbjct: 261 VILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYHLMPIITPSYPSMCATH 320
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
N++ ST ++ + G I + + KA W LF + FF ++Y+ YL V + +
Sbjct: 321 NITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTFFTKNYKYYLSVISASTTKEA 380
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VES++R L +E L HP+
Sbjct: 381 QLIWAGLVESKVRLLVANVENHESIAL-AHPF 411
>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++ +FFR+ W+WP PV+L I +L VW+PR + D H MPIITP+YP M +++
Sbjct: 261 IILKFFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRVYKSDSFHLMPIITPSYPSMCATH 320
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
NV+ ST ++ + G I + + + KA W LF+ + FF ++Y+ YL V + +
Sbjct: 321 NVTKSTKEIICRELARGGNIVDRIMMGKAPWKDLFQKHTFFTKNYKYYLSVISASTTKEA 380
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VES++R L +E L HP+
Sbjct: 381 QLIWAGLVESKVRLLVTNLETHESIAL-AHPF 411
>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
Length = 358
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 14/193 (7%)
Query: 39 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 98
N D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE
Sbjct: 2 NPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEA 61
Query: 99 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYP 153
FF+ Y++Y+ + A L W G VES++R L +E++ + L Q P P
Sbjct: 62 PNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAP 121
Query: 154 HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPG 208
E D K + +GL K E E D+ ++ F + +IN MF +
Sbjct: 122 KENPD--KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVD 177
Query: 209 MEICVSHIRRKQI 221
M+I H++RKQ+
Sbjct: 178 MKIAAMHVKRKQL 190
>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 512
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 25/207 (12%)
Query: 2 LVSRFFRVYTMWRWPN-PVMLCAIDEAELGFSV----WDPRKNRRDKTHHMPIITPAYPC 56
++ RFF +Y+ W+W + V + I E + W P +M IITP +PC
Sbjct: 267 IIERFFFLYSRWKWHDMAVQIEYIQEDIYNQMICGNQWVPE---NKGISNMMIITPCFPC 323
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA--LFEPYLFFESYRNYLQVDIV 114
+N +YNV+ STLRV+ +QFQYG I +E++ N++ + LF+P+ FF+ Y +LQ+ I+
Sbjct: 324 INCAYNVTESTLRVIQEQFQYGYRILDEIQKNQSHYDYQDLFKPFEFFKRYNAFLQIRIL 383
Query: 115 AANADDLLAWKGWVESRLRQLTLMIERDTYGK-LQCHPYPHEYVDTSKP------CAHCA 167
A N ++ WKG VE LR+LT +IE K + HP+ +++D C
Sbjct: 384 AKNKNEYFQWKGHVEINLRKLTKIIENGKLSKIILIHPFS-KFIDLCLKEQLGDYSLGCV 442
Query: 168 FFMGLQRKPGEVVQEGQQFDIRGSVEE 194
+F G++ K Q DI+ S EE
Sbjct: 443 YFYGIKVKDN-------QNDIQISFEE 462
>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
Length = 596
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++VS+FF + W WPNPV+L I++ L VW+P+ R D+ H MPIITPAYP M ++
Sbjct: 260 VIVSKFFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRGDQFHIMPIITPAYPSMCAT 319
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
YN+S S+L ++ + + + I + + + QW LF + FF S Y+ Y+ V + D
Sbjct: 320 YNISQSSLSIIKRELERASEISQMIISGRQQWKDLFVKHTFFTSDYKYYISVISASTEKD 379
Query: 120 DLLAWKGWVESRLRQLTLMIER 141
W G+VES++R L +ER
Sbjct: 380 AQNTWSGFVESKVRVLVQGLER 401
>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
Length = 74
Score = 116 bits (291), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/55 (89%), Positives = 51/55 (92%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYP 55
MLVSRFFRVYT WRWPNPVMLC I+E ELGFSVWDPRKN RD+THHMPIITPAYP
Sbjct: 20 MLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPRDRTHHMPIITPAYP 74
>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
heterostrophus C5]
Length = 578
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 42/269 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VS+FF + W WP PVML I+E +LG VW+P+ D+ H MPIITPA+P M +++
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
V STLR+M D+F + I + + W+ALFE + FF + ++ YL V + +
Sbjct: 323 TVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFTKDHKYYLSVVAASRTKEA 382
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH---------------------EYV-- 157
+ G V+S++R + I+ G PY + EY+
Sbjct: 383 NSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRCKDDQFHEVTQGSLEYMIP 442
Query: 158 -------------DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI-NMYM 203
D + F++GL P + DI V +F+ I + +
Sbjct: 443 ASEVPADGTAPADDDTHIIYTTTFYIGLTLPPDAT----KSLDISYPVSQFRSYITDSDL 498
Query: 204 FWKPGMEICVSHIRRKQIPPYVFPEGYKR 232
+ + M + V H R +P VF G R
Sbjct: 499 YDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
Length = 573
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++ +FFR+ + W+WP PV+L AI +L VW+PR + D H MPIITP+YP M +++
Sbjct: 261 VILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYHLMPIITPSYPSMCATH 320
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
N++ ST ++ + G I + + KA W LF + FF ++Y+ YL V + +
Sbjct: 321 NITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTFFTKNYKYYLSVISASTTKEA 380
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
L W G VES++R L +E L HP+
Sbjct: 381 QLIWAGLVESKVRLLVANVENHESIAL-AHPF 411
>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
ND90Pr]
Length = 571
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 42/269 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VS+FF + W WP PVML I+E +LG VW+P+ D+ H MPIITPA+P M +++
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADD 120
V STLR+M D+F + I + + W+ALFE + FF + ++ YL V + +
Sbjct: 323 TVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFTKDHKYYLSVVAASRTKEA 382
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH---------------------EYV-- 157
+ G V+S++R + I+ G PY + EY+
Sbjct: 383 NSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRCKDDQFHEVTQGSLEYMIP 442
Query: 158 -------------DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI-NMYM 203
D + F++GL P + DI V +F+ I + +
Sbjct: 443 ASEVPADGTAPADDDTHIIYTTTFYIGLTLPPDAT----KSLDISYPVSQFRSYITDSDL 498
Query: 204 FWKPGMEICVSHIRRKQIPPYVFPEGYKR 232
+ + M + V H R +P VF G R
Sbjct: 499 YDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 611
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 90/145 (62%), Gaps = 6/145 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDE---AEL--GFSVWDPRKNRRDKTHHMPIITPAYPC 56
+V +FF V + W WP PVML I++ A+L GF VW+P D+ + MPIITPA+P
Sbjct: 264 IVDKFFFVISHWDWPTPVMLKDIEQLKNADLNKGFRVWNPAIYPGDRKNIMPIITPAFPS 323
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVA 115
M ++YN+S S +V++++ + G I ++ KA+WS LF+ + FF + ++ YL + +
Sbjct: 324 MCATYNISKSGKKVILNELKRGGEITNKIFAGKAKWSDLFKKHTFFTADHKYYLSITASS 383
Query: 116 ANADDLLAWKGWVESRLRQLTLMIE 140
NAD AW G VES++R + +E
Sbjct: 384 LNADSAKAWAGLVESKVRIFVMQLE 408
>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
Length = 505
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 120/237 (50%), Gaps = 22/237 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FF +++ W+WP PV+L + + VWDP+ DK H MP+ITPAYP M +++
Sbjct: 257 IVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATH 316
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST V+ +F + I + E N + +FE FF YR +++V +++ +D
Sbjct: 317 NVSNSTQHVITMEFTRAHKILSDPERN--DFRRIFELSDFFSRYRLFVEVLAMSSCEEDF 374
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-------------VDTSKPCAHCAF 168
W+G++ES++R L E L P+P + ++ K C AF
Sbjct: 375 PKWEGYLESKIRILASKFE-AVDDVLYAIPFPKAFRVAEESIEKIGPRMEGMKKCT--AF 431
Query: 169 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
F+ + P +G++ + V+EF + Y GM I V+ ++RK + ++
Sbjct: 432 FIAIDVIP----VKGKKVIVEQQVKEFIEFVREYEGRASGMRIEVNSLKRKDVQGFL 484
>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
Length = 425
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 8/206 (3%)
Query: 47 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 106
MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR
Sbjct: 1 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYR 60
Query: 107 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC 166
+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 61 HYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDN 119
Query: 167 AF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 219
+ F+G+ + + E V +DI+ + N K GM+I +H+++K
Sbjct: 120 NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKK 179
Query: 220 QIPPYVFPEGYKRTRHPRLASQQRSS 245
Q+ Y+ E ++ + L+ RSS
Sbjct: 180 QLHHYLPAEILQKKKKQSLSDVNRSS 205
>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
Length = 604
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 136/276 (49%), Gaps = 41/276 (14%)
Query: 2 LVSRFFRVYTMW-----------------RWPN-PVMLCAIDEAELGFSVWDPRKNRRDK 43
++ +FFRVY+ W W N P+ + +D+ LG WDPR N RD+
Sbjct: 265 ILCKFFRVYSDWYGSNWIKHAREIWLAHGEWMNSPIKIKDVDDLHLGKRQWDPRSNPRDR 324
Query: 44 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ--WSALFEPYLF 101
MPIITP YP N+++NV+ STL ++ +F G+ +C+++ + WSA++EP F
Sbjct: 325 YDLMPIITPVYPQQNAAFNVNESTLHRIVTEFSRGHRVCQDIMRASSNVPWSAVWEPIRF 384
Query: 102 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD--- 158
F+ Y+ +++V AA D ++G VES +R L L ++ T YP Y +
Sbjct: 385 FDEYQYFVRVVASAATESDRTEFEGLVESTVRHLVLNLQY-TDNVAYAMAYPKAYHEDPV 443
Query: 159 --------TSKPCAHCAFFMGLQ---RKPGEVVQEGQQFDIRGSVEEF-----KLSINMY 202
T+ P A+++ L+ ++ G + + D++G + F ++ M
Sbjct: 444 ADKDGTEATTGPW-RTAWYLALEFGIKQEGRIEPAPSKLDLQGPLVAFYGRLRDRTVTMS 502
Query: 203 MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRL 238
+ + M + V +++ ++P Y++P G R RL
Sbjct: 503 RYDETTMNVDVQAMKQSKLPGYLYPGGVNPHRKVRL 538
>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
Length = 575
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF V WRWP PV+L I L VW+P+ + D H MP+ITPAYP M ++
Sbjct: 263 VIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLMPVITPAYPSMCAT 322
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N++ S++ V+ + + G I E++ + K WS LF + FF S YR Y+ V + + +
Sbjct: 323 FNITRSSMSVIQRELRRGLEISEQIMVGKRPWSDLFVKHTFFTSGYRYYISVVSASKDKE 382
Query: 120 DLLAWKGWVESRLRQLTLMIER 141
W G+VES++R L +E+
Sbjct: 383 AHKVWSGYVESKVRMLVQKLEQ 404
>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
Length = 923
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 15 WPNPVML----CAIDEAELGFS--VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTL 68
WP PV+L + + +GF +WDPR + D+ H MPIITPA+P NS++NVS++T
Sbjct: 463 WPKPVLLKNSITSQNHGYIGFQELIWDPRVKQSDRYHLMPIITPAFPQQNSTFNVSSTTR 522
Query: 69 RVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWV 128
++ G + EV W LFEP FF Y++Y+ + AA DL+ W G V
Sbjct: 523 SILQKFLHEGFLVSTEVICKGLSWPKLFEPSNFFVKYKHYIVISCFAATRADLITWSGLV 582
Query: 129 ESRLRQLTLMIERDTYGKLQCHPYPHEY--VDTSKPCAHCAFFMGLQRKPGEVVQEG--- 183
ES++R L E +T G L H P ++ ++ + +GL E+ +EG
Sbjct: 583 ESKMRYLIGQFEHNT-GVLLAHVNPEQFSPLEEHGDGVESFWVVGL-----EMNKEGIGA 636
Query: 184 QQFDIRGSVEEFKLSINMYMF----WKPGMEICVSHIRRKQI 221
+ D+ ++ F SI W+ GM++ + RR+++
Sbjct: 637 KNIDLTSDIQSFVDSIMRQALNSDVWRQGMKVEAKYRRRREL 678
>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
Length = 587
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 6/154 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FF++Y+ W WP PV+L I++ L VW+P+ D+ H MP+ITPAYP M +++
Sbjct: 256 IVEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPKLYSLDRQHRMPVITPAYPSMCATH 315
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA--- 118
N++ ST ++++D+FQ G TI + W L + + FF Y+ YL V VAA
Sbjct: 316 NITASTQKIILDEFQRGTTIMHGILDGTKNWLDLLQRHDFFHRYKFYLCV--VAATKSTY 373
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
++ L + G ES+LR L +E G HPY
Sbjct: 374 EEHLKYSGMFESKLRLLVQKLEM-VPGVELAHPY 406
>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
Length = 501
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FF Y+ W+WP PV LC+I + VWDP+ DK H MP+ITP YP +NS++
Sbjct: 251 IVCKFFETYSSWKWPTPVQLCSIVDHNYNLKVWDPKVYPADKYHKMPVITPVYPSINSTH 310
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV+ ST ++ + GN E+ +KA +S LFE FF+ ++ +++V I N++DL
Sbjct: 311 NVTQSTFILICSELARGN----ELMRSKAPFSKLFEVSGFFKKHKMFIEVRI---NSEDL 363
Query: 122 LA---WKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 163
A W+G+++S++R L +E L P+P + T + C
Sbjct: 364 QAFNIWEGYIQSKIRILCTKLENLENISLAA-PFPKAF--TGRSC 405
>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 570
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 18/176 (10%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF V + WRWP PV+L I+ L VW+P+ + D H MP+ITPAYP M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N+S S++ ++ + + G I E + + K WS LF + FF S Y+ Y+ V + + +
Sbjct: 319 FNISRSSMAIINRELRRGLEISESIMVGKQPWSDLFVKHTFFTSDYKYYISVISASKSKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 175
W G+VES++R L KL+ HP S AH AF G +R+
Sbjct: 379 AHNVWSGYVESKVRMLV--------QKLEQHP--------SIALAH-AFNKGYERR 417
>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
Length = 410
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++ +FF + W WP + L ++ +G VWDPR RD MP+ITPAYP MNS Y
Sbjct: 259 VLLKFFILLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGTRDSLALMPVITPAYPAMNSLY 318
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKA----QWSALFEPYLFFESYRNYLQVDIVAAN 117
NV STL VM +F +C + W LF P FF + Y+Q+++ A +
Sbjct: 319 NVQRSTLEVMTAEFAAAAEVCTSFLRCRGGQPLDWDRLFMPVPFFTQHTFYIQIEVSADS 378
Query: 118 ADDLLAWKGWVESRLRQLTLMIE 140
DL+ W GWV SR+R+L +E
Sbjct: 379 EQDLVLWDGWVSSRIRRLVRNLE 401
>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
Length = 572
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 18/176 (10%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF V + WRWP PV+L I+ L VW+P+ + D H MP+ITPAYP M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N+S S++ ++ + + G I E + + K WS LF + FF S Y+ Y+ V + + +
Sbjct: 319 FNISRSSMAIINRELRRGLEISESIMVGKRPWSDLFVKHTFFTSDYKYYISVISASKSKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 175
W G+VES++R L KL+ HP S AH AF G +R+
Sbjct: 379 AHNVWSGYVESKVRMLV--------QKLEQHP--------SIALAH-AFNKGYERR 417
>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
Length = 528
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 137/269 (50%), Gaps = 23/269 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV + F V++ W +P+P++LC D L W +N D+ H MPIITPA+P
Sbjct: 263 LVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWG--RNHADRFHLMPIITPAFPE 320
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS++NVS ST+ V+ + TIC +V K W LFE F+ Y++++ + + A
Sbjct: 321 QNSTHNVSRSTMEVIKKEMTDALTICNDVFEGKCDWKHLFEEVNFYSQYKHFVVMKLDAK 380
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
+ ++ G++ESRLR L ER+ KL H P + TSK + +F+GL+
Sbjct: 381 KEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPKKCQPTSK--SQSLWFIGLEF-- 435
Query: 177 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRKQIPPYVFPEGYKRT 233
EVV + D+ + FK ++N+ G +E+ +S+++R + Y+ K+
Sbjct: 436 DEVV---KNMDLTREINNFKWNLNVQAKQIAGFEDVELDISYVKRSHLIKYLPAAELKKG 492
Query: 234 RHPRLASQQRSSENGNEYQTGSGLKRKKD 262
R ++ S +N + G+KRK D
Sbjct: 493 RF--FVAKASSDDNK---ENAGGMKRKCD 516
>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
Length = 575
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF + W WP PV+L A++E L VW+P+ R D+ H MPIITPAYP M ++
Sbjct: 262 VIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLMPIITPAYPSMCAT 321
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N++ S + V+ + Q G I + V L+K W LF + FF S Y+ Y+ V + +
Sbjct: 322 FNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTFFTSGYKYYISVVTTSTTKE 381
Query: 120 DLLAWKGWVESRLRQLTL 137
W G+VES++++ +L
Sbjct: 382 AHKIWSGYVESKVQEGSL 399
>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
Length = 607
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+V++FF V W+WP+P+ L A ++ L WDP+KN RDK H MP+ITPAYP MN++
Sbjct: 260 IVAKFFWVVKNWQWPSPIYLQAREKGPSLNQQEWDPQKNFRDKRHLMPVITPAYPVMNAT 319
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+ ++ ST V++ + G+ I ++ K QW L + FF S Y++Y+ + + D
Sbjct: 320 HTITRSTKEVLIRELNRGHEIMADIYSGKKQWRDLLIKHEFFTSAYQHYIVIVTASKTKD 379
Query: 120 DLLAWKGWVESRLR 133
D AW G V SRLR
Sbjct: 380 DQQAWAGLVTSRLR 393
>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
Length = 496
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 84/156 (53%), Gaps = 5/156 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
M+V FF +++ W WP PV L + A L VWDPR N D+ H MPI+TP+YP NS
Sbjct: 265 MIVYLFFTIFSQWPWPKPVRLRECEYIASLCLPVWDPRLNPSDQYHLMPILTPSYPSQNS 324
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
+YNV S ++ + + G + ++K WS LFE FF+ YR+Y+ V +V
Sbjct: 325 TYNVQRSNRIIIERELKQGLNVVRASMMHKGSWSNLFEAAFFFQ-YRHYVVVIVVGNTKH 383
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKL---QCHPY 152
+ G VESRLR L E + Y K+ CH Y
Sbjct: 384 TFIELCGLVESRLRVLVSNFEVNRYVKMAHVNCHAY 419
>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
Length = 505
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 118/235 (50%), Gaps = 18/235 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FF +++ W+WP PV+L + + VWDP+ DK H MP+ITPAYP M +++
Sbjct: 257 IVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATH 316
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST V+ +F + I +E N + +FE FF Y+ +++V ++ +
Sbjct: 317 NVSNSTQHVITMEFSRAHEILSNLEKN--DFRRIFELSDFFGRYKLFVEVLAMSTLEEGF 374
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY------VDTSKPCAH-----CAFFM 170
W+G+VESR+R L E L P+P + + KP A AFF+
Sbjct: 375 TKWEGYVESRIRILASKFEA-VDDILYAIPFPKAFRVLEESIGKIKPGAEEVKRCTAFFI 433
Query: 171 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
+ P +G++ + V+EF + Y + M I ++ ++RK + ++
Sbjct: 434 AIDVIP----VKGKKVVVEQQVKEFMEFVKEYEGKESNMWIEINSLKRKDVQGFL 484
>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
Length = 635
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF V + WRWP PV+L I+ L +W+P+ + D H MP+ITPAYP M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRIWNPKLYKGDTYHLMPVITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N++ S++ ++ + + I E + + K WS LF + FF + Y+ Y+ V A +
Sbjct: 319 FNITRSSMAIINRELKRALQISESIMVGKRPWSDLFVKHTFFTAGYKYYISVTSAAKTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIER 141
W G+VES++R L +E+
Sbjct: 379 AHTIWSGYVESKVRMLVQKLEQ 400
>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
Length = 435
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 8/200 (4%)
Query: 42 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 101
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 1 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 60
Query: 102 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 161
F+ YR+Y+ + A+ ++ W G VES++R L +ER+ + L H P + +
Sbjct: 61 FQKYRHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 119
Query: 162 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 214
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 120 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 179
Query: 215 HIRRKQIPPYVFPEGYKRTR 234
H+++KQ+ Y+ E ++ +
Sbjct: 180 HVKKKQLHHYLPAEILQKKK 199
>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
Length = 506
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 118/235 (50%), Gaps = 18/235 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FF +++ W+WP PV+L + + VWDP+ DK H MP+ITPAYP M +++
Sbjct: 257 IVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATH 316
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST V+ +F + I E N + +FE FF Y+ +++V ++ + +
Sbjct: 317 NVSNSTQHVITMEFSRAHEILSNPEKN--DFRRIFELSDFFSRYKLFVEVLAMSTSEEGF 374
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY------VDTSKPCAH-----CAFFM 170
W+G+VES++R L E L P+P + + +P A AFF+
Sbjct: 375 AKWEGYVESKIRILASKFEA-VDDILYAIPFPKAFRVGEESIRKIRPGASEVKKCTAFFI 433
Query: 171 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
+ P +G++ + V+EF I Y + M I V+ +++K I ++
Sbjct: 434 AIDIIP----VKGKKVVVEQQVKEFMEFIKEYEGKESSMRIEVNSLKKKDIQGFL 484
>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
Length = 624
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF V + WRWP PV+L I+ L VW+P+ + D H MP+ITPAYP M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLMPVITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N++ S++ ++ + + I E + + WS LF + FF + Y+ Y+ V A +
Sbjct: 319 FNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFFTAGYKYYISVISAAKTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G+VES++R L +E+ L HP+ Y
Sbjct: 379 SHTIWSGYVESKVRMLVQKLEQHQSIAL-AHPFNKGY 414
>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
Length = 631
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF + W WP PV+L ++ L VW+P+ + D+ H MP+ITPAYP M ++
Sbjct: 264 VIVNKFFHIMRRWPWPQPVLLKHVEGGPLQVRVWNPKLYKGDQFHLMPVITPAYPSMCAT 323
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
YN++ S + V+ + Q G I + + L ++ WS LF + FF + Y+ Y+ V + + +
Sbjct: 324 YNITRSAMTVIQQELQRGCDITDAIMLGRSPWSDLFVKHTFFTQGYKYYISVITSSTDKE 383
Query: 120 DLLAWKGWVESRLRQLTLMIER 141
W G+VES++R L +E+
Sbjct: 384 AHKVWSGYVESKVRVLVQGLEQ 405
>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
Length = 432
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 14/185 (7%)
Query: 47 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 106
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
Query: 107 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSK 161
+Y+ + A L W G VES++R L +E++ + L Q P P E D K
Sbjct: 61 HYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--K 118
Query: 162 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHI 216
+ +GL K E E D+ ++ F + +IN MF + M+I H+
Sbjct: 119 EEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 176
Query: 217 RRKQI 221
+RKQ+
Sbjct: 177 KRKQL 181
>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
Length = 700
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 21/176 (11%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR------------------- 41
++V +FFR+ W WP PV+L I++ L VW+P+ +
Sbjct: 266 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQLCFFIPKALTDFSFQIYHG 325
Query: 42 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 101
D+ H MPIITPAYP M +++NVS ST V++ + + G + +++ + + +WS LF + F
Sbjct: 326 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSF 385
Query: 102 FES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
F + Y+ YL ++ + + + W G VES+LR L ++R + ++ HP+P +
Sbjct: 386 FSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 440
>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
Length = 599
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 96/177 (54%), Gaps = 22/177 (12%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR------------------- 41
++V +FFR+ W WP PV+L I++ L VW+P+ +
Sbjct: 266 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQLCFFFIPRALADFSFQIYH 325
Query: 42 -DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 100
D+ H MPIITPAYP M +++NVS ST V++ + + G + +++ + + +WS LF +
Sbjct: 326 GDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHS 385
Query: 101 FFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
FF + Y+ YL ++ + + + W G VES+LR L ++R + ++ HP+P +
Sbjct: 386 FFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 441
>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
Length = 711
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF V + WRWP PV+L I+ L VW+P+ + D H MP+ITPAYP M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLMPVITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+N++ S++ ++ + + I E + + WS LF + FF + Y+ Y+ V A +
Sbjct: 319 FNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFFTAGYKYYISVISAAKTKE 378
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G+VES++R L +E+ L HP+ Y
Sbjct: 379 SHTIWSGYVESKVRMLVQKLEQHQSIAL-AHPFNKGY 414
>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
Length = 619
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF + W WP PV+L ++ L VW+P+ + D+ H MP+ITPAYP M ++
Sbjct: 264 VIVNKFFHIMRRWPWPQPVLLKQVEGGPLQVRVWNPKLYKGDQFHLMPVITPAYPSMCAT 323
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
YN++ S + V+ + Q G I + + L + WS LF + FF + Y+ Y+ V + + +
Sbjct: 324 YNITRSAMTVIQQELQRGCDITDAIMLGRNPWSDLFVKHTFFTQGYKYYISVITSSTDKE 383
Query: 120 DLLAWKGWVESRLRQLTLMIER 141
W G+VES++R L +E+
Sbjct: 384 AHKVWSGYVESKVRVLVQGLEQ 405
>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
Length = 653
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 125/255 (49%), Gaps = 30/255 (11%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPRKNRRDKTHHMPIITPAYPC 56
+V R F +++ W WP+PV+L A+D+ L +WDPRK D+ H MPIITPA+P
Sbjct: 259 IVHRMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPRKKNSDRFHLMPIITPAFPE 318
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD---- 112
NS++NV+ ST ++ ++ G IC+++ KA W LF+ FF Y++Y+ +
Sbjct: 319 QNSTHNVTRSTCHIIRNEICEGLEICKDITEGKATWEDLFKEVKFFSRYKHYIGISDHGY 378
Query: 113 IVAANADDLLAWKGWVESRLRQLTLMIERD-----TYGKLQCH-PYPHEYVDTSKPCAHC 166
I +L W+ ++ESR+R L +ER+ + H P P+ D
Sbjct: 379 IHRRRGIEL--WR-FLESRIRLLVQSLERNQDILIAHNDTNKHRPSPNAKFDVRPENTRI 435
Query: 167 A-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM------EICVSHIRRK 219
+F+GL E + D+ ++ F+ ++ + G+ EI + +++R
Sbjct: 436 TIWFIGL-----EFAEHATNLDLTSEIQRFRTNVELQASGVKGIGPNSQVEIDMFYMKRT 490
Query: 220 QIPPYVFPEGYKRTR 234
++ + K+ R
Sbjct: 491 RLFSIIGAAALKKGR 505
>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
Length = 575
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 118/268 (44%), Gaps = 42/268 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR--DKTHHMPIITPAYPCMNS 59
++S+FF + W+WP PVML + E G VW+P D H MP+ITPA+P M S
Sbjct: 261 ILSKFFNLMHKWQWPRPVMLKEHELPEFGLRVWNPAHQSYPPDARHLMPVITPAFPAMCS 320
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANA 118
++ V+TST ++MM++FQ + I +V + W ALF + FF + ++ YL V +
Sbjct: 321 THTVTTSTKQIMMEEFQRADKIVRDVFNGQGTWEALFNNHSFFTQDHKYYLSVIAASRTK 380
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-------------------VDT 159
+ L + G V+S++R L I+ G P+P + +D
Sbjct: 381 EADLTFHGLVQSKVRLLVAGIDDGQTGIDMARPFPEGFERVHRCKNEDEVEAVTKGSLDY 440
Query: 160 SKPCAHC--------------AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFW 205
P + F++GL R P +E DI F+ I +
Sbjct: 441 MIPVSQVPAAGTTEDHIIYTMTFYIGL-RLP----KERSTLDISYITNHFRSKITESKLY 495
Query: 206 KPG-MEICVSHIRRKQIPPYVFPEGYKR 232
G M + V H R +P +F G R
Sbjct: 496 DEGTMSVKVVHTRNTALPDDLFKPGEVR 523
>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
Length = 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 34/263 (12%)
Query: 15 WPNPVML------CAIDEAELGFSVWDPRKNRRDKT------HHMPIITPAYPCMNSSYN 62
WP+PV+L A D L VWDPR D+ H MPI+TPA+P NS++N
Sbjct: 37 WPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTFN 96
Query: 63 VSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL 122
V+ S+L+++M++ + G ++ KA WSALFE FF Y+++L + ++A D L
Sbjct: 97 VTKSSLKIIMNEIEEGLVTINDIMKGKAGWSALFEEVNFFSRYKHFLALLCLSATEQDEL 156
Query: 123 AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--------VDTSKPCAHC-AFFMGLQ 173
W G VES++R L +ER ++ CH + Y V S C +F+GL
Sbjct: 157 VWCGLVESKIRFLIASLERRESIRV-CHVHTKYYQPRNDPFPVQVSLQNPRCRLWFIGLD 215
Query: 174 RKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEICVSHIRRKQIPPYV---- 225
++ DI+ V+ F +N + GM + ++R+ ++ ++
Sbjct: 216 LNKT----VSRKIDIQHEVQSFMDLLNSMATTQNIYVEGMSVIPHYLRKAELVKWLKMED 271
Query: 226 FPEGYKRTRHPRLASQQRSSENG 248
G K + R+A+ Q G
Sbjct: 272 LTRGKKAPKRRRIATSQNQQATG 294
>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 632
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF + W WP PV+L ++ L VW+P+ + D+ H MP+ITPAYP M ++
Sbjct: 264 VIVNKFFHIMRRWPWPQPVLLKNVEGGPLQVRVWNPKVYKGDQFHLMPVITPAYPSMCAT 323
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
YN++ S + V+ + G I + + + K WS LF + FF + Y+ Y+ V + + +
Sbjct: 324 YNITRSAMTVIQQELTRGCEITDNIMVGKNPWSDLFVKHTFFTQGYKYYISVITASTDKE 383
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP-GE 178
W G+VES++R L +E+ L H + Y + C +Q
Sbjct: 384 AHKIWSGYVESKVRVLVQGLEQHQSIAL-AHAFNKGY-ERRHRCTSDEEVQQIQAGSLNF 441
Query: 179 VVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHI 216
+V++ Q D G+++E KL + PG++ +I
Sbjct: 442 LVKDSQATDDAGALKEEKLETKAELNGIPGLKTETDNI 479
>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 367
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 86/148 (58%), Gaps = 14/148 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V+ WRWPNPVML +AELG VW+ + + P++TPAYP MNS+
Sbjct: 221 LLRKFFLVFKSWRWPNPVMLTKPHDAELGLPVWNSFQ-AANMRQVAPMVTPAYPAMNSTL 279
Query: 62 NVSTSTLRVMMDQFQYGNTICEEV-------ELNKAQ------WSALFEPYLFFESYRNY 108
+VS TL+++ ++F G+ + +++ L+K + W LFEP FF Y Y
Sbjct: 280 SVSRQTLQILHEEFCRGHNVVDKLYKDFQKGALDKDKIESGDIWKELFEPSDFFIGYPYY 339
Query: 109 LQVDIVAANADDLLAWKGWVESRLRQLT 136
L + IV + D AW G+VESRLR+L
Sbjct: 340 LSLCIVGPSQADAQAWAGFVESRLRKLV 367
>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 633
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF + W WP PV+L I + L VW+PR + D H MP+ITPAYP M ++
Sbjct: 261 VIVNKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRVYKGDSYHLMPVITPAYPSMCAT 320
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+NV+ S++ V+ + Q I + + W +F + FF + ++ Y+QV + + +
Sbjct: 321 FNVTRSSMTVIKRELQLAAEITNNIMCSTKPWKDMFAKHTFFTKDFKYYMQVISASRDKE 380
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
W G+VES++R L +ER HE + ++P F G +R
Sbjct: 381 AHKIWSGFVESKVRMLVQSLER------------HESIAVARP-----FIKGFER--FHR 421
Query: 180 VQEGQQF 186
+ G+QF
Sbjct: 422 YRNGEQF 428
>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
NZE10]
Length = 610
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 89/157 (56%), Gaps = 6/157 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
++V++FF V WRWP+PV LC + A +LG V +N +K MPIITP +PCMN+
Sbjct: 258 VIVNKFFMVMGKWRWPDPVTLCKREPAPDLGHYVAQWPENPWEKADKMPIITPVFPCMNA 317
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANA 118
+ ++ S L V++ +FQ I ++ K +W ALF FF E Y++YL + +
Sbjct: 318 TGGLTASNLEVILREFQRALKITNDIHNGKQEWQALFARQTFFTEDYKHYLCLVTGSRTK 377
Query: 119 DDLLAWKGWVESRLRQLTLMIE---RDTYGKLQCHPY 152
+ AW G+V SRLR+L IE T KL HP+
Sbjct: 378 EAQQAWSGFVSSRLRKLVSSIESPQSKTAVKL-IHPF 413
>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
Length = 661
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 5/144 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS---VWDPRKNRRDKTHHMPIITPAYPCM 57
++V++FF + W WP PV+L I E + + VW+P+ D+ H MPIITPAYP M
Sbjct: 258 VVVNKFFHIMLKWPWPLPVLLKDI-EYNISVTRAPVWNPKLYSSDRNHRMPIITPAYPAM 316
Query: 58 NSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAA 116
+++N++ S+ V+M + + G + EE+ +A W ALF + FF S +R YL V +
Sbjct: 317 CATHNINRSSKVVIMQELEKGVQVTEEIMTGRAPWKALFTKHTFFTSDFRYYLTVISSSR 376
Query: 117 NADDLLAWKGWVESRLRQLTLMIE 140
D W G++ESR+R L IE
Sbjct: 377 TKDAQNVWSGFIESRVRVLVNKIE 400
>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
Length = 108
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 69/104 (66%)
Query: 33 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 92
VWDPR N D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+W
Sbjct: 1 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEW 60
Query: 93 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLT 136
S LFE FF+ Y++Y+ + A L W G VES++R L
Sbjct: 61 SKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILV 104
>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
Length = 677
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 44/266 (16%)
Query: 2 LVSRFFRVYTMWRWPNPVMLC-----AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV RFF V WRWP P+++ + E+ WDP+ N D+ H MPIITP +P
Sbjct: 391 LVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQ---WDPQHNIHDRAHLMPIITPGFPA 447
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVEL----NKAQWSALFEPYLFFESYRNYLQVD 112
+N++ NV+ STLRV+ ++F G I +++ + + W+ LF P Y +++ ++
Sbjct: 448 VNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVAIE 507
Query: 113 IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP-------HEYVDTSKPCAH 165
+ A N + L W +V SR R+L ++ T HP P HE ++ +
Sbjct: 508 LRAPNEEALAEWSSFVASRTRKLVETLQH-TPSISALHPLPDLVRAQGHETDESDAVVGY 566
Query: 166 CAFFMGL--------QRKPGE---------VVQEGQQFDIRGSVEE-----FKLSINMYM 203
FF+G Q + G+ + + Q+ + SV +N
Sbjct: 567 --FFIGYTVNVPSTPQPRRGDRRHSARSPVITKNSQEELAKNSVASATRYFLATELNTAA 624
Query: 204 FWKPGMEICVSHIRRKQIPPYVFPEG 229
KPGM++ +++ +P +FP G
Sbjct: 625 EKKPGMQVDINYRSWNDLPSAIFPGG 650
>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 677
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 44/266 (16%)
Query: 2 LVSRFFRVYTMWRWPNPVMLC-----AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
LV RFF V WRWP P+++ + E+ WDP+ N D+ H MPIITP +P
Sbjct: 391 LVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQ---WDPQHNIHDRAHLMPIITPGFPA 447
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVEL----NKAQWSALFEPYLFFESYRNYLQVD 112
+N++ NV+ STLRV+ ++F G I +++ + + W+ LF P Y +++ ++
Sbjct: 448 VNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVAIE 507
Query: 113 IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP-------HEYVDTSKPCAH 165
+ A N + L W +V SR R+L ++ T HP P HE ++ +
Sbjct: 508 LRAPNEEALAEWSSFVASRTRKLVETLQH-TPSISALHPLPDLVRAQGHETDESDAVVGY 566
Query: 166 CAFFMGL--------QRKPGE---------VVQEGQQFDIRGSVEE-----FKLSINMYM 203
FF+G Q + G+ + + Q+ + SV +N
Sbjct: 567 --FFIGYTVNVPPTPQPRRGDRRHSARSPVITKNSQEELAKNSVASATRYFLATELNTAA 624
Query: 204 FWKPGMEICVSHIRRKQIPPYVFPEG 229
KPGM++ +++ +P +FP G
Sbjct: 625 EKKPGMQVDINYRSWNDLPSAIFPGG 650
>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
10762]
Length = 594
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V RFF + W WP PV L E+ L WDP +R D H MPI+TPA P N++
Sbjct: 257 LIVQRFFFIVKRWNWPKPVFLQHKVESSLVIREWDPNTSRHDAGHLMPILTPAVPSTNTA 316
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANAD 119
+ V ST VMM + + G I ++ W ALFE + FF + Y++Y+ V + + D
Sbjct: 317 HTVGPSTKMVMMRELERGEQIIADIYSKSKPWKALFERHNFFTTAYKHYICVVTASKSKD 376
Query: 120 DLLAWKGWVESRLRQLTLMIE 140
AW G V+S+++ L IE
Sbjct: 377 AQDAWAGLVQSKIKWLVQGIE 397
>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
Length = 473
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 15/226 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V ++F Y+ W WP P++L I + VWD +K D+ H MPIITPAYP M S++
Sbjct: 254 IVCKYFEYYSNWTWPEPILLKPIVDHHYNLKVWDNQKYPADRYHKMPIITPAYPSMCSTH 313
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NV ST ++ +F+ I +N + +F+ FF Y+ Y+ + V A+ + +
Sbjct: 314 NVFQSTFDLICREFRRSTEIINN-SINSTDFLQIFDNTDFFRKYKLYINIK-VKADKESI 371
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 181
+W G+VES++R L E + P+P ++ C FF+G+ E+++
Sbjct: 372 KSWSGFVESKVRILCSKFEA-VESIVAAIPFPKPFIKDET----CNFFIGI-----EILK 421
Query: 182 EGQQ---FDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPY 224
G Q + G ++EF +N + M+I +S ++K + +
Sbjct: 422 TGSQNKKIYVDGQIKEFIDFLNEWNGKTAIMKIEISAEKKKSMQTF 467
>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
Length = 359
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 7 FRVYTMWRWPNPVMLCAID-EAELGFS--VWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 63
FR++ W W PV++ + ELG VW+P++N R + PI+TP YP NS+YNV
Sbjct: 151 FRIFAEWDWQKPVLVRDVQLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNV 210
Query: 64 STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLA 123
ST VM+ +F+ + + + W+ LF+ + FF SY+ Y+Q+++ A ++
Sbjct: 211 MASTRDVMVAEFKRARDVTLSILKGETTWATLFKEFPFFTSYKYYIQIEVSAKTSEVFNN 270
Query: 124 WKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
W G+VES++R+ T MIE + + H YP +
Sbjct: 271 WYGFVESQIRRYTRMIEGNK--SIVIHVYPTSF 301
>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
Length = 372
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 71/111 (63%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++ +FF++Y+ W WP PV+L I++ L VW+PR D+ H MP+ITPAYP M ++
Sbjct: 253 VILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCAT 312
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 111
+N++ ST +++M++F G I E+ + WS L E + FF Y+ YL V
Sbjct: 313 HNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCV 363
>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
Length = 704
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
M+V FF +++ W WP PV L + A L VWDPR N D+ H MPI+TP+YP NS
Sbjct: 261 MIVYLFFTIFSQWPWPKPVRLRESEYIASLCLPVWDPRLNPSDQYHLMPILTPSYPSQNS 320
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
+YNV S ++ + + G + ++K WS LFE FF+ YR+Y+ V +V
Sbjct: 321 TYNVQRSNRIIIERELKQGLNVVRASMMHKRSWSNLFEAAFFFQ-YRHYVVVIVVGNVKH 379
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKL---QCHPY 152
+ G VESRLR L E + Y K+ C Y
Sbjct: 380 TFIELCGLVESRLRVLVSNFEVNRYVKMAHINCRAY 415
>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
Length = 508
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 87/169 (51%), Gaps = 44/169 (26%)
Query: 14 RWPNPVMLCAIDE--AELGFS------VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVST 65
+WP P++L I+E EL FS VW+PR D+ H MPIITP+YP M S++NV+
Sbjct: 77 KWPQPILLQQIEEEVKELDFSKRMNFRVWNPRVC--DRNHLMPIITPSYPSMCSTHNVTR 134
Query: 66 STLRVMMDQFQY------------------GNTICEEVELNKAQWSALFEPYLFFESYRN 107
ST+ VM D+F G+ I E++ +A+WS LF + FF+ YR
Sbjct: 135 STMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRAEWSELFAKHDFFQKYRY 194
Query: 108 YLQVDIVAANADDLLAW----------------KGWVESRLRQLTLMIE 140
YLQ+ + A+D L W G VESRLRQL + +E
Sbjct: 195 YLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQLVMKLE 243
>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
Length = 388
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 15/167 (8%)
Query: 33 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 92
VWDPR N D+ H MPIITPA+P NS++NVS STL ++ ++ + IC+++ A W
Sbjct: 156 VWDPRINYSDRFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKSALLICDQIHAGSATW 215
Query: 93 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 152
+ LFE FF YR+++ + + + + G+ ESR+RQL ++ER+ KL H
Sbjct: 216 NNLFEEVNFFSRYRHFVALSMNEESNE------GFFESRIRQLVQIMERNCQVKL-AHIN 268
Query: 153 PHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 199
P ++ +F+GL E+++ + D+ +E FK ++
Sbjct: 269 PKKFKSVQNA---SVWFLGL-----ELIENVKNLDLTAEIEGFKKNV 307
>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
Length = 531
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 62/95 (65%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 62
V +FF V+ W+WP PV L D LGF VWD R N +D+ H M IITPAYP NS+++
Sbjct: 227 VHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAYPQQNSTFH 286
Query: 63 VSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 97
VS+ST +VM+++F I +E+ L KA W LFE
Sbjct: 287 VSSSTRKVMLNEFNSDMQITDEIMLGKAGWDKLFE 321
>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
Length = 505
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 22/237 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V +FF +++ W+WP PV+L + + VWDP+ DK H MP+ITPAYP M +++
Sbjct: 257 IVCKFFELFSSWKWPTPVVLRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATH 316
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
NVS ST V+ +F + I E N + +F+ FF Y+ + ++ ++ +
Sbjct: 317 NVSNSTQHVISMEFARAHEILSSPEKN--DFRKIFDLSDFFSRYKLFAEILAMSTEEEGF 374
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-------------VDTSKPCAHCAF 168
W+G+VES++R L E L P+P + + K C AF
Sbjct: 375 PKWEGYVESKVRILASKFEA-VDDILYAIPFPKAFRVAEENIGKIKYGMQDLKKCT--AF 431
Query: 169 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
F+ + P +G++ + V+EF +N Y + M I ++ +++K + ++
Sbjct: 432 FIAIDVIP----VKGKKVVVEQQVKEFVDFMNEYEGKERSMRIEINSLKKKDVQNFL 484
>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 675
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 11/154 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
++V++FF + W WP PV+L I+ +VW+P+ D+ H MPIITPAYP M
Sbjct: 261 VIVNKFFHIMVKWPWPLPVLLKDIEYGCPVTRVAVWNPKLYASDRNHKMPIITPAYPSMC 320
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAAN 117
+++NV ST+ V+ + + G I +E+ + + W LF + FF + ++ YL V +
Sbjct: 321 ATHNVGNSTMAVIQQELEKGAQITDEIMVGRRPWKDLFTKHTFFTNGFKYYLTVISSSRT 380
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 151
AW G++ESR+R L KL+ HP
Sbjct: 381 KQAQNAWSGFIESRVRLLV--------NKLEMHP 406
>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
Length = 590
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 107/196 (54%), Gaps = 20/196 (10%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+++ RFF + + W WP P+ML I++ L VW+P+ DK H MPIITPAYP M ++
Sbjct: 259 VVLGRFFYLMSTWPWPRPIMLKEIEDGPLQVRVWNPQIYPGDKRHLMPIITPAYPSMCAT 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N++ ST +V+ + + I ++ K +W LF+ + FF + ++ YL IVAA+ D
Sbjct: 319 HNITHSTQKVIKRELLRASQITSDILSEKRRWRDLFDRHTFFTQDFKYYLS--IVAASHD 376
Query: 120 DLLA--WKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG 177
W VES++R+L +IE+ P E V+ ++P F G +R
Sbjct: 377 KEAQDNWSSSVESKVRKLVGLIEQS----------PAEDVELAQP-----FNKGFKRVHH 421
Query: 178 EVVQEGQQFDIRGSVE 193
+E ++ ++GSV+
Sbjct: 422 CKTEEEKEEVLQGSVK 437
>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 632
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAID--EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
++V +FF + W WP PV+L I+ ++ +VW+P+ D+ H MPIITP+YP M
Sbjct: 262 VVVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIITPSYPSMC 321
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAAN 117
+++NV S++ V+ + + G I EE+ L K W LFE + FF + ++ YL V
Sbjct: 322 ATHNVGRSSMAVIQQELERGVQIAEEIMLGKRPWKDLFEKHTFFTNGFKFYLTVISSGRT 381
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 151
+ W G+VESR+R L KL+ HP
Sbjct: 382 KEAQNTWSGFVESRVRVLV--------QKLELHP 407
>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
Length = 632
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAID--EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
++V +FF + W WP PV+L I+ ++ +VW+P+ D+ H MPIITP+YP M
Sbjct: 262 VIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIITPSYPSMC 321
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAAN 117
+++NV S++ V+ + + G I EE+ L K W LFE + FF + ++ YL V
Sbjct: 322 ATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKHTFFTNGFKFYLTVISSGRT 381
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 151
+ W G+VESR+R L KL+ HP
Sbjct: 382 KEAQNTWSGFVESRVRVLV--------QKLELHP 407
>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
Length = 632
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAID--EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
++V +FF + W WP PV+L I+ ++ +VW+P+ D+ H MPIITP+YP M
Sbjct: 262 VIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIITPSYPSMC 321
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAAN 117
+++NV S++ V+ + + G I EE+ L K W LFE + FF + ++ YL V
Sbjct: 322 ATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKHTFFTNGFKFYLTVISSGRT 381
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 151
+ W G+VESR+R L KL+ HP
Sbjct: 382 KEAQNTWSGFVESRVRVLV--------QKLELHP 407
>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
Length = 695
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAID---EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
LV RFF V WRWP P+++ + + G WDP N D+ H MPIITP +P +N
Sbjct: 410 LVHRFFSVLASWRWPTPILVAHPSNGGKVDNGVQ-WDPAHNIHDRAHLMPIITPGFPAVN 468
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVEL----NKAQWSALFEPYLFFESYRNYLQVDIV 114
++ NV+ STLRV+ ++F G I +++ + + W+ LF P Y +++ +++
Sbjct: 469 TAVNVNLSTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHIAIELR 528
Query: 115 AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 153
A N + L W +V SR R+L ++ T HP P
Sbjct: 529 APNEEALAEWSSFVASRTRKLVETLQH-TPSVATLHPLP 566
>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
Length = 1061
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 65/292 (22%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+ RFF+V + W+WP PVML I +A LGF +WDPR++ D++H MPIITPAYP MNSS
Sbjct: 696 IFVRFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMNSSV 755
Query: 62 NVSTSTLRVMMDQFQYGNTICE-------------------EVELNKA------------ 90
VS T V+ ++ + E E +L A
Sbjct: 756 QVSQPTFSVIYEELWRARYLAEIAVGISKPFPTAAPSPESSEADLKAAVVCMATSMPSFD 815
Query: 91 -----------------------QWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGW 127
W LF+P FF Y +Y+ + AA+ + W +
Sbjct: 816 QPLNAVDSTEGVVQTTQGFGEGSAWDKLFQPSNFFIRYSSYMVFNFQAASESAMHKWGKF 875
Query: 128 VESRLRQLTLMIER-DTYGKLQCHP--YPHEYVDTSKPCAHCAFFMGLQ--RKPGEVVQE 182
V+SRLR+L + ++ P +PH D + F+G++ + + +Q
Sbjct: 876 VQSRLRKLVDNLHHMSPVSRVHAFPRYFPHT-CDAERRGPGSCMFIGIEFHYRRHQTIQP 934
Query: 183 GQQFDIRGSVEE---FKLSINMYMF--WKPGMEICVSHIRRKQIPPYVFPEG 229
+++ ++E+ F L+ ++ +P M + +++P +VF G
Sbjct: 935 KDDPEVKKTLEQAIRFFLATDLQQMEDKQPDMTADAKVLSWEELPEFVFRLG 986
>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
Length = 756
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 28/252 (11%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 62
+ +FF V+ WRWPNPVML +AELG VW+ + + P+ITPAYP MNS+ +
Sbjct: 231 LRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQA-ANMRQVAPMITPAYPAMNSTLS 289
Query: 63 VSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL 122
VS TL+++ ++F G+ I ++ L++ Y R ++ I D
Sbjct: 290 VSRQTLQILHEEFCRGHGIVDK----------LYKDYQRGRD-RPGGRLCITGPTLHDAQ 338
Query: 123 AWKGWVESRLRQL-TLMIERDT-YGKLQCHPYPHEY--VDTSKPCAHC------AFFMGL 172
AW G+VESRLR+L + M+ R K+Q P + D + H +F+G
Sbjct: 339 AWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKFDVCCADKTALLTHAQRANSITYFIGF 398
Query: 173 QRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 231
+ ++ G+Q DI + F K + + PGM+I K++P F Y+
Sbjct: 399 --RVDKLRMRGEQLDIERQLSNFRKFELGRFHPLVPGMDILPKSFGVKELPTICFDGTYE 456
Query: 232 RTRHPRLASQQR 243
+LA+ +R
Sbjct: 457 ---GGKLAAMKR 465
>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
++V++FF + W WP PV+L I+ +VW+P+ D+ H MPIITP+YP M
Sbjct: 260 VIVNKFFHIMLKWPWPLPVLLKDIEYGCPVTRVAVWNPKIYASDRNHRMPIITPSYPSMC 319
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAAN 117
+++NV S++ V+ D+ + G + E++ K W LF + FF S +R YL V +
Sbjct: 320 ATHNVGRSSMAVIKDELEKGVQVTEDIMRGKRPWKDLFTKHTFFTSGFRYYLTVISSSRT 379
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 151
W G+VESR+R L KL+ HP
Sbjct: 380 KKAQNVWSGFVESRVRLLV--------NKLEMHP 405
>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
Length = 616
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF + W WP PV+L AI++ L +W+P+ D+ H MPIITPAYP M ++
Sbjct: 261 VVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCAT 320
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N++ S+ V+ + + + + K W LF+ + FF + ++ Y+QV + + +
Sbjct: 321 FNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFKYYIQVIAASKDKE 380
Query: 120 DLLAWKGWVESRLRQLTLMIER 141
W G+VES++R L +ER
Sbjct: 381 SHKLWSGFVESKVRLLVQGLER 402
>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
Length = 611
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF + W WP PV+L AI++ L +W+P+ D+ H MPIITPAYP M ++
Sbjct: 261 VVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCAT 320
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N++ S+ V+ + + + + K W LF+ + FF + ++ Y+QV + + +
Sbjct: 321 FNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFKYYIQVIAASKDKE 380
Query: 120 DLLAWKGWVESRLRQLTLMIER 141
W G+VES++R L +ER
Sbjct: 381 SHKLWSGFVESKVRLLVQGLER 402
>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
Length = 484
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
++V++FF + W WP PV+L AI++ L +W+P+ D+ H MPIITPAYP M ++
Sbjct: 134 VVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCAT 193
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANAD 119
+N++ S+ V+ + + + + K W LF+ + FF + ++ Y+QV + + +
Sbjct: 194 FNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFKYYIQVIAASKDKE 253
Query: 120 DLLAWKGWVESRLRQLTLMIER 141
W G+VES++R L +ER
Sbjct: 254 SHKLWSGFVESKVRLLVQGLER 275
>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
hominis]
Length = 696
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 48/259 (18%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++ ++F +Y W+WP PVML I+ VWDP+ + DK H MP+ITP+YP M S++
Sbjct: 429 IICKYFELYKEWKWPMPVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTH 488
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA--- 118
N+ ST++ ++ + + + E A+W+ F FF+ YR++L V I+ NA
Sbjct: 489 NIMNSTMKRYKEELERAHKLLVE----GAEWNEFFRGTDFFQRYRSFLAVFILLKNAGCT 544
Query: 119 --DDLLA--------------------WKGWVESRLRQLTLMIER--------------D 142
+D + W+G V SR+R L+ +E D
Sbjct: 545 TNNDARSEQEITNEQASGAKETSMHKMWQGHVNSRIRFLSTKLETVEQLDSAPPFPQTFD 604
Query: 143 TYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY 202
G L HP ++ + C+ F+ L + + + F I +EEFK + +
Sbjct: 605 MCGFLGLHPLA--FIPKNALCSLT--FIALDMADSKQLLRKKVF-IDAPIEEFKEMVFDW 659
Query: 203 MFWKPGMEICVSHIRRKQI 221
M++ + ++RK +
Sbjct: 660 DKRTEDMDLVMRAMKRKDV 678
>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
Length = 652
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDE--AELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
++V++FF + W WP PV+L I+ VW+P+ D+ H MPIITPAYP M
Sbjct: 260 VIVNKFFNIMLKWPWPLPVLLKDIEYNGPVTRVPVWNPKLYASDRNHKMPIITPAYPSMC 319
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAAN 117
+++NV S++ V+ + + G + EE+ L + W LF + FF S ++ YL V +
Sbjct: 320 ATHNVGRSSMVVIQQELKKGAEVTEEIMLGRRPWKDLFTKHTFFTSGFKYYLTVISSSRT 379
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 151
W G++ESR+R L K++ HP
Sbjct: 380 KKAQNVWSGFIESRVRLLV--------NKIEMHP 405
>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
CCMP2712]
Length = 336
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI--DEAELGFSVWDPRKNRR-DKTHHMPIITPAYPCMN 58
L+ FF Y W+WP PV L I + +L VW D+ H MPII+P YP N
Sbjct: 154 LLYFFFFTYCQWKWPQPVELAEIVANSHDLNLPVWGYGATEMSDRRHLMPIISPCYPAQN 213
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
++ VS STL++M + F +C+++ KA W LFEP F +Y N+LQ+ A +
Sbjct: 214 TAALVSRSTLKIMKEMFIRAMGVCKQIHEGKAGWCDLFEPVDLFSTYANFLQIQASARSK 273
Query: 119 DDLLAWKGWVESRLRQLTLMIER--DTYGKLQCHPYPHEYVDTSK 161
D WKG+ + + + +ER D Y + HP Y K
Sbjct: 274 ADHNMWKGFCAANIHNMISYLERCPDAYLD-RAHPIQRSYAKPRK 317
>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
Length = 554
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP NS+Y
Sbjct: 203 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 262
Query: 62 NVSTSTLRVMMDQFQ 76
NVSTST VM+++F+
Sbjct: 263 NVSTSTRTVMVEEFK 277
>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 508
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 12/233 (5%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML FF + W WP P+ + + EL WDP D MPIITPAYP NS
Sbjct: 262 MLALYFFSEISQWTWPTPIYINRPNYGEL--LSWDP-TTESDHNDVMPIITPAYPSTNSQ 318
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+ +TS+ ++ + I + WSA+ E + FFESY+NY+++DI A D
Sbjct: 319 RSATTSSRNRIIQEMVKALQIMPNIITGDLPWSAVCEDHEFFESYKNYIEIDIRAEGLAD 378
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHP-YPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
WKG V S++++L +E +++C P +P + + + F+GL+ + +
Sbjct: 379 YNWWKGTVISKVKRLITSLE--AIERVKCAPIFPSSFDRENNNKYQGSIFIGLETEKTK- 435
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSH---IRRKQIPPYVFPEG 229
EG++ + +++++ I Y + + + I RK+IP + FP G
Sbjct: 436 DDEGKKVNPSAAIKKYLEEI--YKLTNRPLSTKIENPQVINRKKIPDFCFPNG 486
>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
Length = 572
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 134/279 (48%), Gaps = 27/279 (9%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAE-------LGFSVWDPRKNRRDKTHHMPIITPA 53
+L+ +FF +Y W++ + +++ +E + WDP + R + +ITP
Sbjct: 273 LLLEKFFHLYKHWKFEDAIIVAPPEECQAPDGQERYNLHAWDPTR-RHFSRRPLTVITPT 331
Query: 54 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 113
YP NS++NV+ S L V+ ++ N++ + + ++ ++ LFEP +FF+ Y ++Q+++
Sbjct: 332 YPMDNSTFNVTDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAMFFKQYGTFVQIEV 391
Query: 114 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH-------PYPHEYVDTSK----P 162
+ + + A+ G+VES++R+L + G H P P E++ P
Sbjct: 392 LGSE-KHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIPAEHLGGGDPEDGP 450
Query: 163 CAHCAFFMGLQRKPGEVVQ---EGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 219
+ F++GL+ V GQ D V+EF L I++ + + I V ++R+
Sbjct: 451 WQNIFFYLGLKFDDNLVRHMKASGQSVDFTQPVKEFLLGIHITDPTQTSISIKV--VKRR 508
Query: 220 QIPPYVFPEGYKRTRHP--RLASQQRSSENGNEYQTGSG 256
+P +V E Y +++ RL + E+ + G
Sbjct: 509 ALPEWVKKEYYSQSKFEGMRLEDEHGELESAKKRALGEA 547
>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 126/237 (53%), Gaps = 26/237 (10%)
Query: 2 LVSRFFRVYTMWRWPN-PVMLCAIDE----AELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ RFF +Y+ WRW + PV + I + ++L W P + M IITP +PC
Sbjct: 268 LLERFFFLYSRWRWQDFPVQVEYIVDDVANSKLSADQWRP-----EYKSSMMIITPCFPC 322
Query: 57 MNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVA 115
MN ++NVS++TLR++ +Q +G TIC +++ +S LF+ + FF+ Y+++L++ I+A
Sbjct: 323 MNCAHNVSSTTLRIIQEQLWHGYETIC-KIQNGSKNYSDLFKSFKFFKKYKHFLEIKILA 381
Query: 116 ANADDLLAWKGWVESRLRQLTLMIERDTY-GKLQCHPYP---HEYVDTS-----KPCAHC 166
N +D WKG VES LR+LT + E Y L+ HPYP ++D + K C
Sbjct: 382 TNKNDYTVWKGHVESGLRKLTRLFESPQYMNLLEVHPYPSYIENFLDDTQSQKNKYKFQC 441
Query: 167 AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK--PGMEICVSHIRRKQI 221
++ GL E + +++ + F + MY K M I SH+ R ++
Sbjct: 442 KYYYGLMCLQSE---NNESINLKEACVYFVEQLEMYPMNKVLESMNIQCSHLLRSEL 495
>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
Length = 507
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 62
+ +FF V++ W WP PV++ + + VW+P+ N K MP+ITP YP + S++N
Sbjct: 241 IEKFFEVFSKWAWPQPVIIKEVPDCNYNLKVWNPKVNVHHKNDKMPVITPVYPPLCSTHN 300
Query: 63 VSTSTLRVMMDQFQYGNTICEEVELNKAQ----WSALFEPYLFFESYRNYLQVDIVAANA 118
++TSTL VM +FQ G I E NK + L E FF ++ Y + + N+
Sbjct: 301 ITTSTLFVMKREFQRGTAIFAESLQNKTEPFKVLDELCEDTDFFTRHKTYFMIAMACDNS 360
Query: 119 DDLLAWKGWVESRLRQLTLMIE 140
+ + G+ E+R+R +E
Sbjct: 361 KEFGRFMGFAETRVRMFAQKLE 382
>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Query: 20 MLCA--IDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 77
ML A I+E L VW+P+ D+ H MPIITPAYP M +++NVS ST V++ + +
Sbjct: 243 MLVARPIEEGPLQMKVWNPKIYHGDRYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKR 302
Query: 78 GNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLT 136
G I +++ L + W+ LF + FF + Y+ YL + + + W G VES+LR L
Sbjct: 303 GGDIVDKIFLGQLTWNDLFTRHTFFSQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLV 362
Query: 137 LMIERDTYGKLQCHPYPHEY 156
++R + ++ HP+P +
Sbjct: 363 GALDRKSSIEV-AHPFPKGF 381
>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
Length = 708
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++ ++F +Y W+WP PVML I+ VWDP+ + DK H MP+ITP+YP M S++
Sbjct: 418 MICKYFELYKEWKWPTPVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTH 477
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIV 114
N+ ST++ ++ + G+ + E +W F FF+ Y+++L V I+
Sbjct: 478 NIINSTMKRYKEELERGHRLLAE----GKEWKEFFRSTDFFQRYKSFLAVFIL 526
>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
anophagefferens]
Length = 402
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 28/180 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVW--DPRKNRRDKTHH------MPIITPA 53
L+ +FF ++ W WP P +LC + GF VW + + R +H MPI+TPA
Sbjct: 224 LLCKFFAIFAKWDWPAPAILCRPLDHGYGFEVWGQNAEQLRGRMAYHNLRNNLMPIVTPA 283
Query: 54 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ---------------WSALFEP 98
YP MNS+ NV+ + V+ D+F G +C+ + A+ W L E
Sbjct: 284 YPAMNSAANVNPWSFAVLRDEFARGAEVCKRIVARHAELAENGAVDPDVGGPLWDELVEK 343
Query: 99 YLFFESYRNYLQVDIVA-ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQ-CHPYPHEY 156
FF+ Y YL V+++ +D +KG++ SRLR+L +E+ + L+ H +P EY
Sbjct: 344 TDFFDKYDAYLAVNVLGDGEKEDFDNFKGFLSSRLRKL---VEKMGHLPLKMIHLFPKEY 400
>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 28/225 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA-YPCMNSS 60
L++ FF ++ W+WP PV+L ++ T P + P PC +
Sbjct: 250 LLANFFYIFAHWQWPTPVVLL---------------EDTYPATGAPPGLMPIQLPCGSHQ 294
Query: 61 Y---NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAAN 117
Y N++ ST +M +F G+ + ++ W LFE Y + +Y + ++ + AAN
Sbjct: 295 YCNSNITRSTFYKIMAEFLRGHNLTKDYLKPNFSWKNLFELYPYENTYTWFTKIHLSAAN 354
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG 177
+DL W GWV+SR R L IE + YG C P P EYV+T + F+ GLQ +
Sbjct: 355 QEDLSDWVGWVKSRFRCLLSKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRTI 411
Query: 178 EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 222
V DI EF ++N F P I +S ++ Q+P
Sbjct: 412 NVS------DIESVETEFLKNLNSGSFQGPVGRIQLSVVKESQLP 450
>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 799
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 33/195 (16%)
Query: 6 FFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVST 65
FF V + W+WP P+ML +A+LG W + RD+TH MPIITPAYP MNSS V+
Sbjct: 503 FFYVLSEWQWPKPIMLNIPYDAKLGLECWSFQ--LRDRTHVMPIITPAYPQMNSSAQVTA 560
Query: 66 STLRVMMDQFQYGNTICEEVELNKA-------------------------QWSALFEPYL 100
STL V+ ++ + E L+ W L++P
Sbjct: 561 STLSVIKEELWRARDLLEREILSSITSHQQDQRTRKEAGALEKPDTDTFLSWDVLYQPSS 620
Query: 101 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 160
FF Y Y+ + I ++ +L W+ +V SRL +L M++ L H YP V+
Sbjct: 621 FFVRYDWYVGLTI-QIDSSELGRWETFVCSRLHKLVKMLQDLPMIDL-VHGYPQFLVNK- 677
Query: 161 KPCAHCAFFMGLQRK 175
A + F+GL+R+
Sbjct: 678 ---AGSSLFLGLKRR 689
>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 706
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 37/189 (19%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA-----------ELGFSVWDPRKNRRDKTHHMPII 50
+++RFFR Y W PNP + A LG WDPR+++ D P++
Sbjct: 255 MITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRG-WDPRESKSDAMALFPVL 313
Query: 51 TPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKAQ----------WSALFEPY 99
TPA P N+ YNV+ + LR + D+FQ G + + +++ ++ A+ WS + EP
Sbjct: 314 TPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVLEPA 373
Query: 100 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL----------TLMIERDTYGKLQC 149
FF +++YLQ+ + ++A+ A+ VESR+R L TL + Y +L+
Sbjct: 374 PFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTL----EDYRQLRL 429
Query: 150 HPYPHEYVD 158
H PH + D
Sbjct: 430 HLNPHRFED 438
>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
Length = 554
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 18/139 (12%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 62
V + F V++ W+ LGF +WDPR N + + H M IITPAYP NS+++
Sbjct: 416 VHKCFLVFSRWKL----------RQNLGFQLWDPRVNVQGQFHLMSIITPAYPQQNSTFH 465
Query: 63 VSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL 122
VS ST +VM+++F G I +E+ L+KA W L SY + + N DD L
Sbjct: 466 VSRSTRKVMLNEFNRGMQITDEIMLDKAGWDKLIATL----SYSTL----VTSNNTDDHL 517
Query: 123 AWKGWVESRLRQLTLMIER 141
W G VES++R L +ER
Sbjct: 518 EWCGLVESKIRYLIQNLER 536
>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 777
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 46/260 (17%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAEL-----GFSV---WDPRKNRRDKTHHMPIITPAY 54
V FF + W+WP PV L +++A + G +V W+P + RD H PI+TPAY
Sbjct: 399 VQLFFETFANWKWPTPVSLIDLNDASITTPPPGAAVLPSWNPAIHIRDGLHVCPILTPAY 458
Query: 55 PCMNSSYNVSTSTLRVMMDQFQY-GNTICEEVELN------------KAQWSALFE---P 98
P MNSSYNV+ LR M + QY + I V+ + K W L+
Sbjct: 459 PVMNSSYNVALPQLRRMTEALQYTAHKIARWVDRSHTTYNRGVPVRRKIPWHRLWSLNAG 518
Query: 99 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH-EYV 157
++F +++Y+ I A + + W VESRLR L +E H +PH +
Sbjct: 519 WVF--RHQHYVHATIRAPQGEAFVTWFRLVESRLRVLISSLETP-----DSHAWPHGRFF 571
Query: 158 DTSKPCA---------HCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG 208
+ P A FF+GL+ D+R +F +N ++
Sbjct: 572 YRNVPIAPYDELNGLREAHFFIGLR-----FASHVDTADVRTLTLDFLRQVNGWIGRDSS 626
Query: 209 MEICVSHIRRKQIPPYVFPE 228
M++ + H+ +P +V E
Sbjct: 627 MDLSLGHVTLPNLPRFVLDE 646
>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 18/234 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+L+S FF+ ++ W WP PV A+++ L P R+ MPI P P
Sbjct: 346 VLMSSFFKTFSGWPWPTPV---ALEDGRL------PTGGTRETRALMPIQLPCSPYGYCH 396
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
N++ ST + + G+ + ++ W+ +FEP+ + + Y ++++ + ++N D+
Sbjct: 397 SNITKSTFYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDE 456
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L W GWV+SR R L +E + G C P P E++D + FF G+Q PG +
Sbjct: 457 LGDWVGWVKSRFRFLLAKVE-EVQG--LCDPNPTEFIDPDAGEPNVVFFWGVQ--PGRI- 510
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
DI ++F +IN + P ++ +S I Q+P Y + R R
Sbjct: 511 ---NFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGYAXLDTGSRNR 561
>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 18/224 (8%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+L+S FF+ ++ W WP PV A+++ L P R+ MPI P P
Sbjct: 305 VLMSSFFKTFSGWPWPTPV---ALEDGRL------PTGGTRETRALMPIQLPCSPYGYCH 355
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
N++ ST + + G+ + ++ W+ +FEP+ + + Y ++++ + ++N D+
Sbjct: 356 SNITKSTFYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDE 415
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
L W GWV+SR R L +E + G C P P E++D + FF G+Q PG +
Sbjct: 416 LGDWVGWVKSRFRFLLAKVE-EVQG--LCDPNPTEFIDPDAGGPNVVFFWGVQ--PGRI- 469
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPY 224
DI ++F +IN + P ++ +S I Q+P Y
Sbjct: 470 ---NFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGY 510
>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
Length = 426
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
LV FF + W WP+PV + +I A +L WDP++N +D MPI+TP +P N++
Sbjct: 191 LVYTFFAQFASWPWPHPVQIASIKFASDLNIFSWDPQRNAQDGRDLMPILTPVFPNKNAA 250
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
+ V +T +++ D+ I +V W LFE Y + +R++L + + + ++
Sbjct: 251 FTVRQATRKIVTDELIRARDIVSDVLRGSGTWEKLFERYDLRDDHRHFLLLTLQTTSKEE 310
Query: 121 LLAWKGWVESRLRQLTLMIERDTY 144
L+ G ++SRLR L +E + Y
Sbjct: 311 LVVVGGLIDSRLRDLAQALEDEQY 334
>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 505
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V RFF VY W+W + G S R+ D+ H MP+ITP +P N++Y
Sbjct: 277 IVERFFFVYARWQW--------TATRDYGNSNVPLRRYTSDRHHVMPVITPIFPTHNTTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQ---------WSALFEPYLFFESYRNYLQVD 112
NV S RV++ + + G I E + +NK+ W+ L P+ FF+ YR +L ++
Sbjct: 329 NVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQFLLLE 388
Query: 113 IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 153
I A L +KG VESR+R L +E K+ P+P
Sbjct: 389 ISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVLPQPHP 429
>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
Length = 1051
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 83/292 (28%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++ +FF +Y+ W+WPNPV+L + +WDP+ ++ D+ H MPIITPAYP + S++
Sbjct: 739 ILYKFFEIYSNWKWPNPVLLKHNVDRNFNLKIWDPKVHQTDRMHKMPIITPAYPSICSTH 798
Query: 62 NVSTST-------LRVMMDQFQ--------------YGN-------------------TI 81
NV+ +T L+ +D F+ +G+ I
Sbjct: 799 NVTNTTLGVINEELKRCLDIFKESKNIDSSFDETKIFGHESDINCASKQSIDPKSKKLKI 858
Query: 82 CEEVELN---KAQW---------------------SALFEPYLFFESYRNYLQVDIVAAN 117
E+ E N K +W LF+ FF+ Y+ YL + +
Sbjct: 859 GEDHENNINTKVKWDLNNLSFDNLKVFYEKFYGLLKKLFQQSDFFKKYKFYLNIKLTN-- 916
Query: 118 ADDLLAWKGWVESRLRQLTLMIERD---TYG-KLQCHPYPHEYVDTSKPCAHCAFFMGLQ 173
DD WKG++ES++R L +E + G ++ P+P +V FF+GL
Sbjct: 917 -DD--KWKGFIESKIRLLCAKLENSEGFSIGYMIKAVPFPQSFVYND----FVHFFVGLD 969
Query: 174 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 225
K + + +I V +F +N + G EI + ++K+I ++
Sbjct: 970 YK------DRIKINIDKPVNDFLRILNDWDKKDEGSEISIKINKKKEIGEFL 1015
>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 687
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 2 LVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDPRKNRRDKTHHMPIIT 51
+V RFFR+Y W PNP + L + WDPR+++ D P++T
Sbjct: 252 MVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRGWDPRESKSDALALFPVLT 311
Query: 52 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE-----VELNKAQ------WSALFEPYL 100
PA P N+ YNV+ + LR + D+F G+ IC VE K + WS + EP
Sbjct: 312 PAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPHGIWSKILEPVK 371
Query: 101 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 135
FF Y+ YL V + +A+ + VES++R L
Sbjct: 372 FFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFL 406
>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
Length = 687
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 2 LVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDPRKNRRDKTHHMPIIT 51
+V RFFR+Y W PNP + L + WDPR+++ D P++T
Sbjct: 252 MVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRGWDPRESKSDALALFPVLT 311
Query: 52 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE-----VELNKAQ------WSALFEPYL 100
PA P N+ YNV+ + LR + D+F G+ IC VE K + WS + EP
Sbjct: 312 PAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPHGIWSKILEPVK 371
Query: 101 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 135
FF Y+ YL V + +A+ + VES++R L
Sbjct: 372 FFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFL 406
>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
Length = 709
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 37/189 (19%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA-----------ELGFSVWDPRKNRRDKTHHMPII 50
+V+RFFR Y W PNP + A LG WDPR+++ D P++
Sbjct: 255 MVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRG-WDPRESKSDAMALFPVL 313
Query: 51 TPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKAQ----------WSALFEPY 99
TPA P N+ YNV+ + LR + D+FQ G + + +++ ++ A+ WS + EP
Sbjct: 314 TPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVLEPA 373
Query: 100 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL----------TLMIERDTYGKLQC 149
FF +++YLQ+ + ++A+ A+ VESR+R L TL + Y +L+
Sbjct: 374 PFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTL----EDYRQLRL 429
Query: 150 HPYPHEYVD 158
H P + D
Sbjct: 430 HLNPRRFED 438
>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 436
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 17/148 (11%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+V RFF VY W+W + G S R+ D+ H MP+ITP +P N++Y
Sbjct: 277 IVERFFFVYARWQW--------TATRDYGNSNAPRRRYTSDRHHVMPVITPIFPTHNTTY 328
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQ---------WSALFEPYLFFESYRNYLQVD 112
NV S RV++ + + G I E + +NK+ W+ L P+ FF+ YR +L ++
Sbjct: 329 NVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQFLLLE 388
Query: 113 IVAANADDLLAWKGWVESRLRQLTLMIE 140
I A L +KG VESR+R L +E
Sbjct: 389 ISAETEKAFLKFKGLVESRIRVLVKNLE 416
>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
Length = 506
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 62
+ +FF V++ W WP PV++ + + VW+P+ N + K MP+ITP YP + S++N
Sbjct: 241 IEKFFDVFSKWPWPQPVIIKEVPDCNYNLKVWNPKINPQHKNDKMPVITPVYPPLCSTHN 300
Query: 63 VSTSTLRVMMDQFQYGNTICEEVELNK---AQWSALFEPYLFFESYRNYLQVDIVAANAD 119
++ STL V +F G I E K L E FF ++ Y + + N
Sbjct: 301 ITNSTLFVAKKEFLRGVAIFSENADKKDPMKILDQLCEDADFFTRHKTYFMIALACDNPK 360
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV---DTSK--------PC----- 163
+ + G+ E+R+R +E + + +P +Y+ TSK C
Sbjct: 361 EFSRFMGFAETRVRMFAQKLE-NIENIEYAYTFPKKYILEDVTSKNVPLLKELKCGDDSY 419
Query: 164 AHCAFFMGLQRKPGEV-VQEGQQFDIRGSVEEFKLSINMY 202
A AFF+G+ ++ + ++ +++ V EFK S+ Y
Sbjct: 420 AFGAFFIGIDFSTVKLPLNASKKMNLKKPVLEFKSSLETY 459
>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
Length = 700
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 37/189 (19%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA-----------ELGFSVWDPRKNRRDKTHHMPII 50
+V+RFFR Y W PNP + A LG WDPR+++ D P++
Sbjct: 255 MVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRG-WDPRESKSDAMALFPVL 313
Query: 51 TPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKAQ----------WSALFEPY 99
TPA P N+ YNV+ + LR + D+FQ G + + +++ ++ A+ WS + EP
Sbjct: 314 TPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVLEPA 373
Query: 100 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL----------TLMIERDTYGKLQC 149
FF +++YLQ+ + ++A+ A+ VESR+R L TL + Y +L+
Sbjct: 374 PFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTL----EDYRQLRL 429
Query: 150 HPYPHEYVD 158
H P + D
Sbjct: 430 HLNPRRFED 438
>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L S FF +++ W WP PV L D+A L W P D MPI+ P +P +
Sbjct: 303 LFSMFFDIFSHWPWPLPVALH--DQAPL----WGP-----DGCSLMPIVMPCFPPEFCAS 351
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
+++ ST + ++ + G + +++ W+ +F PY + Y ++L + + A ++L
Sbjct: 352 SITKSTFNKIKEELRRGFALTKDIRNVDIDWTWIFAPYPYTVKYEHFLHMVLSAPTTEEL 411
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 181
W GWV+SR R L L +E + C P P E V+ + + FF GL + ++
Sbjct: 412 RDWVGWVKSRFRNLILKLES---LDVDCDPDPSEKVNHTIAAPNVVFFWGLIYRSTKISA 468
Query: 182 EGQQFDIRGSV 192
+ D SV
Sbjct: 469 SSLKNDFMKSV 479
>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
Length = 492
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+S FF Y W WP PVML + G S P ++ + MPI P P
Sbjct: 236 LISNFFATYATWPWPTPVML------QDGMS--SPAEDFIETRSFMPIRLPCSPHEYCHS 287
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
N++ ST + +F G+++ +++ W+ +FEP+ + + Y ++++ + A + D++
Sbjct: 288 NITKSTYYRIRTEFLRGHSLTKDLLKPDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEV 347
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 172
W GWV+SR R L L +E + QC P P EY D + F+ GL
Sbjct: 348 GDWVGWVKSRFRALLLKLEG---LQGQCDPSPVEYADRDVSEPNVVFYWGL 395
>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 709
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 37/189 (19%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA-----------ELGFSVWDPRKNRRDKTHHMPII 50
+++RFFR Y W PNP + A LG WDPR+++ D P++
Sbjct: 255 MITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRG-WDPRESKSDAMALFPVL 313
Query: 51 TPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKAQ----------WSALFEPY 99
TPA P N+ YNV+ + LR + D+FQ G + + ++ ++ + WS + EP
Sbjct: 314 TPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSNDLGMSAVEAEAKFGPFGVWSRVLEPA 373
Query: 100 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL----------TLMIERDTYGKLQC 149
FF +R+YL + + ++A+ A+ VESR+R L TL + Y +L+
Sbjct: 374 PFFGKFRHYLHIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTL----EDYRQLRL 429
Query: 150 HPYPHEYVD 158
H P + D
Sbjct: 430 HLNPRRFED 438
>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 554
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 20/160 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYP---CMN 58
L + FF ++ W W PV L P +R ++MPI+ P P CM+
Sbjct: 320 LFTMFFEIFAHWDWQIPVNLHG-----------QPTNCKRSDGYYMPIVMPCTPPELCMS 368
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
N++ T + + ++ G + +++ + +W+ LF P+ + Y+ +L++ + + +
Sbjct: 369 ---NMTKCTFKKIREELMRGYALTKDLWRHDFEWTWLFAPFPYATRYQQFLRIALCSPTS 425
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 158
++L W GWV+SR RQL L +ER+ L+C PY E VD
Sbjct: 426 EELRDWTGWVKSRFRQLILKLERN---GLECDPYSSEEVD 462
>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
Length = 338
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAI--DEAELGFSVWD-PRKNRRDKTHHMPIITPAYPCMN 58
L+ FF Y+ W+WP PV L + + +L VW D+ H MPIITP YP N
Sbjct: 224 LLYFFFFTYSQWKWPQPVGLTEVIANSHDLNLPVWGFGATEMSDRRHLMPIITPCYPAQN 283
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 98
++ NVS STL+VM ++F IC+++ A+WS LFEP
Sbjct: 284 ATANVSKSTLKVMQEEFTRAKDICKQILEGNAEWSDLFEP 323
>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 26/224 (11%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L++ FF + +W+WP PV+L D + MPI PC + Y
Sbjct: 224 LLANFFYTFALWQWPTPVVLLE-----------DTYPSTGAPPGLMPI---QLPCGSHQY 269
Query: 62 ---NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
++ ST ++ +F G+ + ++ W LFE Y + +Y + ++ + AAN
Sbjct: 270 CNSTITRSTFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQ 329
Query: 119 DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGE 178
+DL W GWV+SR R L + IE + YG C P P EYV+T + F+ GLQ +
Sbjct: 330 EDLSDWVGWVKSRFRCLLIKIE-EVYG--ICDPNPTEYVETYTKQPNIVFYWGLQLRTIN 386
Query: 179 VVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 222
V DI +F ++N F I ++ ++ Q+P
Sbjct: 387 VS------DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 424
>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L++ FF + W+WP PV+L D + MPI P +
Sbjct: 248 LLANFFYTFAHWQWPTPVVLLE-----------DTYPSTGAPPGLMPIQLPCGSHQYCNS 296
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
++ ST ++ +F G+ + ++ W LFE Y + +Y + ++ + AAN +DL
Sbjct: 297 TITRSTFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDL 356
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 181
W GWV+SR R L + IE + YG C P P EYV+T + F+ GLQ + V
Sbjct: 357 SDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRTINVS- 412
Query: 182 EGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 222
DI +F ++N F I ++ ++ Q+P
Sbjct: 413 -----DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 448
>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
Length = 677
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 2 LVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFS-VWDPRKNRRDKTHHMPIIT 51
+V RFFR+Y W PNP + L + WDPR+++ D P++T
Sbjct: 252 MVVRFFRIYHAWFSPNPQGSGKENRAIYLTETMRVKTNLGRCWDPRESKSDALALFPVLT 311
Query: 52 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE---VELNKAQ--------WSALFEPYL 100
PA P N+ +NV+ + LR + +F G+ IC + +N+ + WS + EP
Sbjct: 312 PAVPYGNACFNVTMTNLRQLCAEFSRGHNICSSCIGMNVNETKEKFGPHGLWSKILEPVK 371
Query: 101 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL------TLMIERDTYGKLQCHPYPH 154
FF Y+ Y+ V + ++A+ + VES++R L + +++ +Q H P
Sbjct: 372 FFGEYKYYMHVQVTCSDAELYQGYVEAVESKIRFLWAGTAESRAQSIESFPHIQLHLNPR 431
Query: 155 EY 156
Y
Sbjct: 432 RY 433
>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L++ FF + W+WP PV+L D + MPI P +
Sbjct: 223 LLANFFYTFAHWQWPTPVVLLE-----------DTYPSTGAPPGLMPIQLPCGSHQYCNS 271
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
++ ST ++ +F G+ + ++ W LFE Y + +Y + ++ + AAN +DL
Sbjct: 272 TITRSTFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDL 331
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 181
W GWV+SR R L + IE + YG C P P EYV+T + F+ GLQ + V
Sbjct: 332 SDWVGWVKSRFRCLLIKIE-EVYG--ICDPNPTEYVETYTKQPNIVFYWGLQLRTINVS- 387
Query: 182 EGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 222
DI +F ++N F I ++ ++ Q+P
Sbjct: 388 -----DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 423
>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
Length = 613
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 99/191 (51%), Gaps = 20/191 (10%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAE-------LGFSVWDPRKNRRDKTHHMPIITPA 53
+L+ +FF +Y W++ + +++ +E + WDP ++ + + +ITP
Sbjct: 273 LLLEKFFFLYKHWKFEDAIIVAPPEECQAPDGQERYNLHSWDPTRHHFSR-RPLTVITPT 331
Query: 54 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 113
YP NS++N++ S L V+ ++ N++ + + ++ ++ LFEP +FF+ Y ++Q+++
Sbjct: 332 YPMANSTFNITDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAMFFKQYGTFVQIEV 391
Query: 114 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH-------PYPHEYVDTSK----P 162
+ + + A+ G+VES++R+L + G H P P E++ P
Sbjct: 392 LGSE-KHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIPAEHLGGGDPEDGP 450
Query: 163 CAHCAFFMGLQ 173
+ F++GL+
Sbjct: 451 WQNIFFYLGLK 461
>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 645
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 2 LVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDPRKNRRDKTHHMPIIT 51
+V RFFR+Y W PNP + L + WDPR+++ D P++T
Sbjct: 252 IVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLT 311
Query: 52 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-----------WSALFEPYL 100
PA P N+ +NV+ + LR + +F G+ IC + A+ WS L EP
Sbjct: 312 PAVPYGNACFNVTLTNLRQLCAEFARGHEICSSSLVASAEEAKSRFGPHGIWSRLLEPVK 371
Query: 101 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 135
FF +Y+ YL V + +A+ + VES++R L
Sbjct: 372 FFGNYKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 406
>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 113
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEA-ELG---FSVWDPRKNRRDKTHHMPIITPAYPCM 57
LV RFF + + W W NPV LC I ++ E+G F VW+P++ D++H MP+ITPA+P M
Sbjct: 26 LVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHLMPVITPAFPSM 85
Query: 58 NSSYNVSTSTLRVMMDQFQYGNTI 81
NS+YNV+ +T R++M + + + +
Sbjct: 86 NSTYNVTETTKRIIMGEIERAHKL 109
>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 645
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 21/155 (13%)
Query: 2 LVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDPRKNRRDKTHHMPIIT 51
+V RFFR+Y W PNP + L + WDPR+++ D P++T
Sbjct: 252 IVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLT 311
Query: 52 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-----------WSALFEPYL 100
PA P N+ +NV+ + LR + +F G+ IC + A+ WS L EP
Sbjct: 312 PAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVK 371
Query: 101 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 135
FF ++ YL V + +A+ + VESR+R L
Sbjct: 372 FFGEHKYYLHVLVSCTDAEAYQGYVDAVESRIRFL 406
>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 406
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 21/155 (13%)
Query: 2 LVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDPRKNRRDKTHHMPIIT 51
+V RFFR+Y W PNP + L + WDPR+++ D P++T
Sbjct: 13 IVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLT 72
Query: 52 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-----------WSALFEPYL 100
PA P N+ +NV+ + LR + +F G+ IC + A+ WS L EP
Sbjct: 73 PAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVK 132
Query: 101 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 135
FF ++ YL V + +A+ + VES++R L
Sbjct: 133 FFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 167
>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 108/257 (42%), Gaps = 42/257 (16%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSV---WDPRKNRRDKTHHMPIITPAYPCMN 58
LV +FF Y W W PV L +++ LG + W P N D + M I+TP YP N
Sbjct: 249 LVEKFFWHYKRWDWAIPVELQHVED--LGITHIPHWSPINNYHDMSV-MKILTPVYPSQN 305
Query: 59 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 118
+SY V+ STL + + ++ +++ KA W L++ FF Y +Y+ V + +
Sbjct: 306 ASYTVTRSTLYRIKRELDRAESVVQKIADGKATWPRLWKQIPFFGVYSHYICVQALTNSE 365
Query: 119 DDLLAWKGWVESRLRQLTLMI--------------------ERD--TYGKLQCHPYPHEY 156
D ++G VES +R L + E+D T H P EY
Sbjct: 366 QDRTLYEGLVESTVRNLVTSLEFHPAVTYAIPIPKAFRRSPEKDPSTLEDEDTHERPPEY 425
Query: 157 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINM----YMFWKPGMEIC 212
C +F+GL P + +Q DI + +F+ + + P M
Sbjct: 426 ------CWRTLWFIGLVFDP----KATEQLDILTVMSDFERRVRFKESRMTRYDPSMRYT 475
Query: 213 VSHIRRKQIPPYVFPEG 229
V + R +IP ++ E
Sbjct: 476 VDPMARDEIPTWLHAEA 492
>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 336
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ +FF V+ WRWP P++L +A G VW R P+ITPAYP MNS+
Sbjct: 229 LLRKFFLVFKTWRWPQPLLLTKPHDAGYGLPVWSVATAVR---QVAPMITPAYPAMNSTL 285
Query: 62 NVSTSTLRVMMDQFQYGNTICEEV----ELNKAQ---WSALFEPYLFFESY 105
VS TL+++ ++F G+T+ +++ + N AQ W+ LFEP FF +Y
Sbjct: 286 AVSRQTLQILQEEFNRGHTVVDQLWKDYQKNPAQELNWNTLFEPSDFFINY 336
>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+S FF Y MW WP PVML + + +V D + R +MPI P P
Sbjct: 224 LISNFFSTYAMWPWPTPVML----QDGMSSNVEDVIETR----FYMPIRLPCSPYEYCHS 275
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNK--AQWSALFEPYLFFESYRNYLQVDIVAANAD 119
NV+ ST + +F G+++ ++ K + +FEP+ + +Y ++++ + A + D
Sbjct: 276 NVTKSTFTKIRAEFLRGHSMTRDLLKLKLDSDVGRIFEPFPYSTNYTRFVKIYLSAPDQD 335
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQR 174
+L W GWV+S R L L +E + C P P EYVD + F+ GL R
Sbjct: 336 ELGDWVGWVKSHFRCLLLKLEA---VQGFCDPNPMEYVDMDASEPNVVFYWGLNR 387
>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 645
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 21/155 (13%)
Query: 2 LVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDPRKNRRDKTHHMPIIT 51
+V RFFR+Y W PNP + L + WDPR+++ D P++T
Sbjct: 252 IVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLT 311
Query: 52 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-----------WSALFEPYL 100
PA P N+ +NV+ + LR + +F G+ IC + A+ WS L EP
Sbjct: 312 PAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVK 371
Query: 101 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 135
FF ++ YL V + +A+ + VES++R L
Sbjct: 372 FFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 406
>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
Length = 494
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 106/230 (46%), Gaps = 7/230 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++ FF W WP P+ + S WDP + ++D MPIITPAYP +NS +
Sbjct: 254 IIVMFFNDLATWTWPEPIYINTPTTGNR--SNWDPTR-QQDHKDCMPIITPAYPTINSLH 310
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
+ + S+ M +F+ G + ++A W + + FF +R +++V +VA
Sbjct: 311 SATKSSRNRMTVEFKRGFKVASACLKSEASWERIIDSPKFFVRHRKFVEVLVVATEEKVY 370
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-VDTSKPCAHCA-FFMGLQRKPGEV 179
+ +V+SR+R L + IE + +P E+ + + C+ F++GL +
Sbjct: 371 TEFMKFVQSRVRFLAINIETQLRHVSHAYIWPVEFPANGYRGNEFCSVFYIGLSYHVPKD 430
Query: 180 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 229
+ + D+ +++ I P ++ + + K +P ++FP G
Sbjct: 431 ENQSRTLDLTSPAKKWVDDIRQKA--PPNADVILDVVDTKDLPSFLFPNG 478
>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
Length = 671
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 2 LVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFS-VWDPRKNRRDKTHHMPIIT 51
+V RFFR+Y W PNP + L + WDPR+++ D P++T
Sbjct: 252 MVVRFFRIYHSWFSPNPHESGKENRAIYLTETMRVKTSLGRCWDPRESKSDALALFPVLT 311
Query: 52 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE---VELNKAQ--------WSALFEPYL 100
PA P N+ YNV+ + LR + +F G+ IC + +N + W+ + EP
Sbjct: 312 PAVPYGNACYNVTITNLRQLCSEFARGHEICSSCIGMSVNDTRTKFGKYGLWNKILEPVK 371
Query: 101 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 135
F YR YL + I + + + VES++R L
Sbjct: 372 VFGEYRYYLHIQITCTDPEAYQGYVDAVESKIRFL 406
>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
Length = 519
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L + FF +++ W WP PV L +D+ P R MPI+ P P +
Sbjct: 282 LFNSFFDIFSHWHWPLPVSL--LDQ---------PTPWRPHCCSFMPIVMPCSPPEFCAS 330
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
+++ ST + ++ Q G + + W+ LF P+ + Y+++L++ + A A++L
Sbjct: 331 SITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEEL 390
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG---- 177
W GWV+SR R L L +E + G + C P P E D S + FF GL +
Sbjct: 391 RDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNIC 447
Query: 178 -----EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 213
E + DI G + I M + W + CV
Sbjct: 448 IDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 488
>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 546
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L + FF +++ W WP PV L +D+ P R MPI+ P P +
Sbjct: 309 LFNSFFDIFSHWHWPLPVSL--LDQ---------PTPWRPHCCSFMPIVMPCSPPEFCAS 357
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
+++ ST + ++ Q G + + W+ LF P+ + Y+++L++ + A A++L
Sbjct: 358 SITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEEL 417
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG---- 177
W GWV+SR R L L +E + G + C P P E D S + FF GL +
Sbjct: 418 RDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNIC 474
Query: 178 -----EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 213
E + DI G + I M + W + CV
Sbjct: 475 IDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 515
>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
Length = 382
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 8/183 (4%)
Query: 70 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 129
VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++ L W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 130 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGL---QRKPGEVVQE 182
S++R L +ER+ + L H P + + + F+G+ + + E V
Sbjct: 63 SKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNI 121
Query: 183 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 242
+DI+ + N K GM+I +H+++KQ+ Y+ E ++ + L+
Sbjct: 122 DLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVN 181
Query: 243 RSS 245
RSS
Sbjct: 182 RSS 184
>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
Length = 519
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L + FF +++ W WP PV L D+ P R MPI+ P P +
Sbjct: 282 LFNSFFDIFSHWHWPLPVSL--FDQ---------PTPWRPHCCSFMPIVMPCSPPEFCAS 330
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
+++ ST + ++ Q G + + W+ LF P+ + Y+++L++ + A A++L
Sbjct: 331 SITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEEL 390
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG---- 177
W GWV+SR R L L +E + G + C P P E D S + FF GL +
Sbjct: 391 RDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNIC 447
Query: 178 -----EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 213
E + DI G + I M + W + CV
Sbjct: 448 IDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 488
>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
Length = 550
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAE---LGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
VS FF++Y+ W W PV+ IDE+E + + + D K R DK M IITPAYP N+
Sbjct: 281 VSLFFQIYSQWNWKVPVV---IDESEQEIICYYLQDEDK-RNDKI--MQIITPAYPFFNT 334
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
++ V T + + +FQ G W+ + P+ FF+ ++ ++ + IV+ ++
Sbjct: 335 TFKVHKITFQTIFQEFQIGAQ-------KLGDWNEVLRPFDFFDCFQYFVALSIVSKTSE 387
Query: 120 DLLAWKGWVESRLRQLTLMI--ERDTYG----KLQCHPYPHEYVDTSKPCAHCAFFMGLQ 173
+ W G+ E++L +L ++ + Y +L+ P E ++ +F+G++
Sbjct: 388 NFHKWTGFCEAQLPKLLKLVGNNEEVYDTKSFELRITPEGEENLERDH-AKSLTYFLGIK 446
Query: 174 RKPGEVVQEGQQFDIRGSVEEFKLSIN 200
+ + QE +R + +F + +N
Sbjct: 447 K----LKQEAWPLFLRLPITQFAIELN 469
>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 545
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 28/186 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVML------CAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYP 55
L + FF+ + W W PV L C E L MPI+ P P
Sbjct: 318 LFAVFFQTFAHWPWQVPVSLHDELTTCLHSEGRL-----------------MPIVMPCTP 360
Query: 56 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVA 115
+ V+ +L+ + ++ G + + + QWS LFEP+ + + Y+ +L++ + A
Sbjct: 361 PEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRA 420
Query: 116 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 175
+L W GWV+SR R L L +ER ++C P P E VD + + F+ GL
Sbjct: 421 PTIAELGDWAGWVKSRFRFLILKLER---AGIECDPCPSEEVDHTDNDPNVVFYWGL--I 475
Query: 176 PGEVVQ 181
P ++Q
Sbjct: 476 PKRIIQ 481
>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
gi|194707762|gb|ACF87965.1| unknown [Zea mays]
Length = 430
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 28/186 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVML------CAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYP 55
L + FF+ + W W PV L C E L MPI+ P P
Sbjct: 203 LFAVFFQTFAHWPWQVPVSLHDELTTCLHSEGRL-----------------MPIVMPCTP 245
Query: 56 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVA 115
+ V+ +L+ + ++ G + + + QWS LFEP+ + + Y+ +L++ + A
Sbjct: 246 LEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRA 305
Query: 116 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 175
+L W GWV+SR R L L +ER ++C P P E VD + + F+ GL
Sbjct: 306 PTIAELGDWAGWVKSRFRFLILKLER---AGIECDPCPSEEVDHTDNDPNVVFYWGL--I 360
Query: 176 PGEVVQ 181
P ++Q
Sbjct: 361 PKRIIQ 366
>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 990
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 5 RFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 58
RFF+V + W+WP PVML I +A LGF +WDPR++ D++H MPIITPAYP MN
Sbjct: 656 RFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMN 709
>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 431
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L + FF +++ W WP PV L +D+ P R MPI+ P P +
Sbjct: 194 LFNSFFDIFSHWHWPLPVSL--LDQ---------PTPWRPHCCSFMPIVMPCSPPEFCAS 242
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
+++ ST + ++ Q G + + W+ LF P+ + Y+++L++ + A A++L
Sbjct: 243 SITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEEL 302
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG---- 177
W GWV+SR R L L +E + G + C P P E D S + FF GL +
Sbjct: 303 RDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNIC 359
Query: 178 -----EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 213
E + DI G + I M + W + CV
Sbjct: 360 IDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 400
>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
Length = 431
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L + FF +++ W WP PV L +D+ P R MPI+ P P +
Sbjct: 194 LFNSFFDIFSHWHWPLPVSL--LDQ---------PTPWRPHCCSFMPIVMPCSPPEFCAS 242
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
+++ ST + ++ Q G + + W+ LF P+ + Y+++L++ + A A++L
Sbjct: 243 SITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEEL 302
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG---- 177
W GWV+SR R L L +E + G + C P P E D S + FF GL +
Sbjct: 303 RDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNIC 359
Query: 178 -----EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 213
E + DI G + I M + W + CV
Sbjct: 360 IDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 400
>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 904
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L++ FF VY W W PV + + R K+ MPI+TP P NS+
Sbjct: 740 LLAEFFEVYNHWDWQQPVAI----------TPGSARYKPGHKSDKMPIVTPTPPFNNSAR 789
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELN-KAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
NV+ STL M +F I + + N +A + L +P FF+ Y YL V++ + ++D+
Sbjct: 790 NVARSTLTEMQQEFFRAFDITQAPQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDE 849
Query: 121 LLAWKGWVESRLRQLTLMIERD--TYGKLQCHPYPHEYVD 158
+ GW+ESRL L +E++ TY + P+P +V+
Sbjct: 850 VTKCLGWLESRLIALIFDLEKNPQTYAR----PFPGTFVN 885
>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1230
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 24/167 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L++ FF VY W W PV + G + + P K+ MPI+TP P NS+
Sbjct: 963 LLAEFFEVYNHWDWQQPVAITP------GSARYKPGH----KSDKMPIVTPTPPFNNSAR 1012
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELN-KAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
NV+ STL M +F I + + N +A + L +P FF+ Y YL V++ + ++D+
Sbjct: 1013 NVARSTLTEMQQEFFRAFDITQASQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDE 1072
Query: 121 LLAWK-------GWVESRLRQLTLMIERD--TYGKLQCHPYPHEYVD 158
+ W GW+ESRL L +E++ TY + P+P +V+
Sbjct: 1073 VTKWPTNFSLSLGWLESRLIALIFDLEKNPQTYAR----PFPGTFVN 1115
>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 430
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 28/186 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVML------CAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYP 55
L + FF+ + W W PV L C E L MPI+ P P
Sbjct: 203 LFAVFFQTFAHWPWQVPVSLHDELTTCLHSEGRL-----------------MPIVMPCTP 245
Query: 56 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVA 115
+ V+ +L+ + ++ G + + + QWS LFEP+ + + Y+ +L++ + A
Sbjct: 246 PEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRA 305
Query: 116 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 175
+L W GWV+SR R L L +ER ++C P P E VD + + F+ GL
Sbjct: 306 PTIAELGDWAGWVKSRFRFLILKLER---AGIECDPCPSEEVDHTDNDPNVVFYWGL--I 360
Query: 176 PGEVVQ 181
P ++Q
Sbjct: 361 PKRIIQ 366
>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 265
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 28/186 (15%)
Query: 2 LVSRFFRVYTMWRWPNPVML------CAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYP 55
L + FF+ + W W PV L C E L MPI+ P P
Sbjct: 38 LFAVFFQTFAHWPWQVPVSLHDELTTCLHSEGRL-----------------MPIVMPCTP 80
Query: 56 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVA 115
+ V+ +L+ + ++ G + + + QWS LFEP+ + + Y+ +L++ + A
Sbjct: 81 PEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRA 140
Query: 116 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 175
+L W GWV+SR R L L +ER ++C P P E VD + + F+ GL
Sbjct: 141 PTIAELGDWAGWVKSRFRFLILKLER---AGIECDPCPSEEVDHTDNDPNVVFYWGL--I 195
Query: 176 PGEVVQ 181
P ++Q
Sbjct: 196 PKRIIQ 201
>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 21/146 (14%)
Query: 3 VSRFFRVYTMWRWPNPVMLCAIDEAELGFS--------VWDPRKNRR-DKTHHMPIITPA 53
VS FF++Y+ W W PV+ IDE+E F W +++R DK M IITPA
Sbjct: 257 VSLFFQIYSQWNWKIPVV---IDESEQDFIQIETFKTLCWKRDEDKRNDKI--MQIITPA 311
Query: 54 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 113
YP N+++ V+ T + + +FQ G W+ + P FF+ ++ ++ + I
Sbjct: 312 YPFFNTTFKVNKITFQTIFQEFQIGAQ-------KLGDWNEVLRPLDFFDCFQYFVAISI 364
Query: 114 VAANADDLLAWKGWVESRLRQLTLMI 139
V+ ++++ W G+ E++L +L +I
Sbjct: 365 VSKSSENFHKWTGFCEAQLPKLLKLI 390
>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 34/37 (91%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 37
MLVSRFFRVYT WRWPNPVMLC+I+E +LGF VWDPR
Sbjct: 251 MLVSRFFRVYTQWRWPNPVMLCSIEEDDLGFPVWDPR 287
>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 550
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 31/229 (13%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L + FF +++ W WP PV L +D+ P R MPI+ P P +
Sbjct: 305 LFNSFFDIFSHWHWPLPVSL--LDQ---------PTPWRPHCCSFMPIVMPCSPPEFCAS 353
Query: 62 NVSTSTLRVMMDQFQYGNTI-------CEEVELN-KAQWSALFEPYLFFESYRNYLQVDI 113
+++ ST + ++ Q G + E+ + N W+ LF P+ + Y+++L++ +
Sbjct: 354 SITRSTFNKIKEELQRGFALTKLGVCTVEQGDRNGDINWTELFAPFPYTVRYKHFLRIVL 413
Query: 114 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 173
A A++L W GWV+SR R L L +E + G + C P P E D S + FF GL
Sbjct: 414 SAPVAEELRDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMIEPNVVFFWGLM 470
Query: 174 RKPG---------EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 213
+ E + DI G + I M + W + CV
Sbjct: 471 YRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 519
>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
Length = 455
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 20/194 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L + FF ++ W W PV L P RR MPI+ P P +
Sbjct: 221 LFTIFFDIFAHWNWQIPVSLHG-----------QPTNCRRPDGSFMPILLPCTPPEFCTS 269
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
N++ T + + ++ G + +E + +W LF P+ + Y +L++ + A +++L
Sbjct: 270 NMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEEL 329
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 181
W GWV+SR R L L +E ++C P D+++ H F + G + +
Sbjct: 330 RDWAGWVKSRFRNLILKLESI---GVECDP------DSTEEVDHTVFEPSIVCHWGLIYK 380
Query: 182 EGQQFDIRGSVEEF 195
DI E+F
Sbjct: 381 TSTHIDISSLGEDF 394
>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 534
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 110/256 (42%), Gaps = 43/256 (16%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAEL----GF---SVWDPRKNRRDKTHHMP------ 48
LV RFFRVY+ W W + +E GF VW P R +P
Sbjct: 257 LVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPKRTTTDQPLPLAASPM 316
Query: 49 -IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE--VELNKAQ-WSALFEPYLFFE- 103
+ITPAYP MNS++ V+ T+ + + + G I V+L + W L EP FF+
Sbjct: 317 AVITPAYPSMNSTFGVTRMTMDTIKKELERGAGIISSKGVDLRSRECWETLLEPIHFFDY 376
Query: 104 ---SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLM----IERDTYGKLQCHPYPHEY 156
Y+ +LQ++I A+ + +G V S+L+ L L + + K +
Sbjct: 377 DQGGYKQFLQIEIGGASELSHKSAEGLVNSKLKPLLLRKMPEVAPEDTNKAPYRAWTGAV 436
Query: 157 V--DTSKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEF------KLSINMYMFWKP 207
D K +C A F+GL PG D+R +V EF +L+ M +
Sbjct: 437 ALEDPYKEYPYCSALFVGLSIPPG--------MDLRPAVREFMERLGIELATQMPEYKAG 488
Query: 208 GM-EICVSHIRRKQIP 222
GM ++ V H+ +P
Sbjct: 489 GMFDVRVRHVAGPSLP 504
>gi|361066261|gb|AEW07442.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142733|gb|AFG52754.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142735|gb|AFG52755.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142737|gb|AFG52756.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142739|gb|AFG52757.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142741|gb|AFG52758.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142743|gb|AFG52759.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142745|gb|AFG52760.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142747|gb|AFG52761.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142749|gb|AFG52762.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142751|gb|AFG52763.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142753|gb|AFG52764.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142755|gb|AFG52765.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142757|gb|AFG52766.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142759|gb|AFG52767.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
Length = 104
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 43/57 (75%)
Query: 183 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA 239
G+QFDIR +V+EF+ S+ MY WKPGMEI VSHI+R+ IP +VFP G + R +++
Sbjct: 1 GEQFDIRVTVDEFRHSVKMYTLWKPGMEINVSHIKRRSIPSFVFPGGVRPPRTTKMS 57
>gi|224141617|ref|XP_002324163.1| predicted protein [Populus trichocarpa]
gi|222865597|gb|EEF02728.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 33/39 (84%)
Query: 139 IERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG 177
IERDT G LQCHPYP+EY+D SK C HCAFFMGLQRK G
Sbjct: 6 IERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEG 44
>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 493
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++++FF V + WRWP PVML + + +W + D MPIITP YP NSS+
Sbjct: 267 ILNKFFLVMSQWRWPEPVMLLP-EGYGVSSQLWSITQMPWDI---MPIITPVYPQQNSSF 322
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
NVS STL VM + G I +++ + + W + F P + Y +Y+ + D
Sbjct: 323 NVSKSTLLVMKNALTEGVRITDDILMERCDWKSFFHPVHIADMYEHYVVLQTFRYTTD 380
>gi|344249366|gb|EGW05470.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 63
Score = 74.3 bits (181), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 47 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 106
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
Length = 343
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 120/273 (43%), Gaps = 61/273 (22%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++ + F V++ W+WP+PV+L + C++S
Sbjct: 110 IIQKVFFVFSTWKWPSPVVL------------------------------KQFGCVDSKL 139
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
STL ++ ++ + IC++++ A W+ LFE FF Y++++ + I N D
Sbjct: 140 ANLKSTLHIIQEEMKSALEICDQIQKGNATWNDLFEEINFFSRYKHFVALTI---NEDTN 196
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 181
+ G+ ES++RQL +IER++ K H P + + +F+GL E +
Sbjct: 197 I---GFFESKIRQLVQIIERNSQVK-TAHINPRKLKNIRN---ESTWFLGL-----EFTE 244
Query: 182 EGQQFDIRGSVEEFKLSINMYMFWKPG----MEICVSHIRRKQIPPYVFPEGYKRTRHPR 237
+ D+ +E FK NM G +++ ++++R + ++ KR R +
Sbjct: 245 NAKNLDLTSEIEGFKR--NMARQQSKGIVGQIQLDATYVKRSDLIKFISLGDLKRGRFVK 302
Query: 238 ---LASQQRSSENGNEYQTGSGLKRKKDPESVD 267
A+++R + +G+ +T K P +D
Sbjct: 303 SKTAANRKRPASSGDSTET-------KKPRVID 328
>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 2479]
gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 8904]
Length = 573
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 127/302 (42%), Gaps = 65/302 (21%)
Query: 47 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 106
MP+ITPAYP M S++N++ ST+ ++ ++ + + W LF P FF YR
Sbjct: 241 MPVITPAYPSMCSTHNITQSTMTIIKNEMLRDKIVNNP----GSSWVELFTPVDFFSLYR 296
Query: 107 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP--------------- 151
Y+QV A++A DL K W+ + ++ L + T L HP
Sbjct: 297 TYVQVVASASSAQDL---KDWLRTLVQDLEM-----TDNVLLAHPQVNGISKTYICLTEE 348
Query: 152 ---------YPHE--------YVDTSKPCAHCA-FFMGL--QRKPGEVVQEGQQFDIRGS 191
P E Y D + FF+GL ++KP + Q+ +Q ++ +
Sbjct: 349 EQAQASQGELPPEAMMRKEEDYADKEHTKVYTKNFFIGLDIEKKPKD-GQQPRQLNLYYA 407
Query: 192 VEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEG-------YKRTRHPRLASQQR 243
+ F + + + + M + + +R ++P + FP+G KR + ++
Sbjct: 408 SKRFCFACQSWDKYNEQDMSVILRPCKRSELPAFCFPDGQPPKKKKGKRAQQEKVGDAAL 467
Query: 244 SSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNV 303
++E QTGS + E D+ GP KR P P+ P V S TG++
Sbjct: 468 ATE-AEGGQTGSQQAGESAGEITDEQGPSKRSKAEPD------PNGAVP--VPSATGADP 518
Query: 304 EP 305
P
Sbjct: 519 AP 520
>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 112/259 (43%), Gaps = 37/259 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR--DKTHHMPIITPAYPCMNS 59
L+S FF ++ W WP PV S+ DP R D MPI+ P P
Sbjct: 300 LLSLFFDIFVHWPWPLPV------------SLLDPPVPCRGPDGCSLMPIMLPCIPPEFC 347
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
S + + ST + ++ G + ++ WS LF P+ + Y+ +L++ + A +
Sbjct: 348 SSSTTESTFSKIKEELWRGYALSKDTRSTDFNWSWLFAPFPYGARYKCFLRIVLSAPMGE 407
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
+L W GWV+SR R L L +E + G + C P P E VD + + FF GL +
Sbjct: 408 ELRDWVGWVKSRFRNLLLKLE--SLG-VYCDPDPSEQVDHTITDPNVVFFWGL------I 458
Query: 180 VQEGQQFDIRGSVEEFKLSI--NMYMFWKPGMEIC------VSHIRRKQIPPYVFPEGYK 231
+ Q I E+F S+ N+Y G E C +S + Q+P VF
Sbjct: 459 YRRNIQICISSLKEDFMKSVCNNIY-----GKEKCAHSDITMSIVGPPQLPKSVFDLSVY 513
Query: 232 RTRHPR-LASQQRSSENGN 249
+ P+ + Q +N N
Sbjct: 514 SEKLPQHMMGHQLMKQNYN 532
>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
Length = 1210
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 8/78 (10%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAE----LGFSVWDPRKNRRDKTHHMPIITPAYPC 56
MLV FF++++ W WP PV L E+E L VWDPR N D+ H MPI+TP+YP
Sbjct: 1133 MLVYLFFKIFSQWPWPKPVRL---RESEYIPSLCLPVWDPRLNLMDQYHLMPILTPSYPS 1189
Query: 57 MNSSYNVSTSTLRVMMDQ 74
NS+YNV S R+++++
Sbjct: 1190 QNSAYNVQRSN-RIILER 1206
>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+S FF ++ W WP PV L +D L D MPI+ P P S
Sbjct: 300 LLSLFFDIFVHWPWPLPVSL--LDPPVLC--------GGPDGCSLMPIMLPCIPPEFCSS 349
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
+ + ST + ++ + G + ++ + WS LF P+ + Y+ +L++ + A D+L
Sbjct: 350 STTESTFSKIKEELRRGYALSKDTRSTDSDWSWLFAPFPYGARYKCFLRIVLSAPMEDEL 409
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL-QRKPGEVV 180
W GWV+SR R L L +E + G + C P P + VD + + FF GL R+ ++
Sbjct: 410 RDWVGWVKSRFRNLLLKLE--SLG-VYCDPDPSKQVDHTITDPNVVFFWGLIYRRSIQIC 466
Query: 181 QEGQQFDIRGSV 192
+ D SV
Sbjct: 467 TNSLKEDFMKSV 478
>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
Length = 454
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L + FF ++ W W PV L P RR MPI+ P P +
Sbjct: 221 LFTIFFDIFAHWNWQIPVSLHG-----------QPTNCRRPDGSFMPILLPCTPPEFCTS 269
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
N++ T + + ++ G + +E + +W LF P+ + Y +L++ + A +++L
Sbjct: 270 NMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEEL 329
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 181
W GWV+SR L+++ ++ G ++C P D+++ H F + G + +
Sbjct: 330 RDWAGWVKSR---FNLILKLESIG-VECDP------DSTEEVDHTVFEPSIVCHWGLIYK 379
Query: 182 EGQQFDIRGSVEEF 195
DI E+F
Sbjct: 380 TSTHIDISSLGEDF 393
>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
Length = 472
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L + FF ++ W W PV L P RR MPI+ P P +
Sbjct: 239 LFTIFFDIFAHWNWQIPVSLHG-----------QPTNCRRPDGSFMPILLPCTPPEFCTS 287
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
N++ T + + ++ G + +E + +W LF P+ + Y +L++ + A +++L
Sbjct: 288 NMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEEL 347
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 181
W GWV+SR L+++ ++ G ++C P D+++ H F + G + +
Sbjct: 348 RDWAGWVKSR---FNLILKLESIG-VECDP------DSTEEVDHTVFEPSIVCHWGLIYK 397
Query: 182 EGQQFDIRGSVEEF 195
DI E+F
Sbjct: 398 TSTHIDISSLGEDF 411
>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
Length = 83
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 37/58 (63%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 59
LV +FF V W WPNPV+L +E L VWDPR N D+ H MPIITPAYP NS
Sbjct: 26 LVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNS 83
>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 707
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++ +FF Y+ W+WP +L FS P + ++++ M I TPAYP NS+
Sbjct: 388 IIEQFFLQYSSWKWPTMEVLLG------PFS--QPEERQKNQKFEMSIYTPAYPEYNSTE 439
Query: 62 NVSTSTLRVMMDQFQYGNTIC-EEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
V L ++ + + N I EE++ +A W L + F Y ++++D++ D+
Sbjct: 440 RVKKINLEIIDYKIKEANRIIQEEIKTGQAPWDRLIQEEDFLNKYTKFIEIDLIRIERDE 499
Query: 121 LLAWKGWVESRL--RQLTL--MIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGLQRK 175
+ + +L + LTL + +L+ P+P Y + C AF +G++ K
Sbjct: 500 TMREFKTQQDKLSVKLLTLFEFFSQKKPQELEIRPWPFFYKKKDQKYPQCSAFLIGIKAK 559
Query: 176 PGEVVQEGQQFDIRGSVEEFKL 197
+QE ++ + ++EF +
Sbjct: 560 SH--IQE--EYSFKNCIQEFAM 577
>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 417
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 42 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 101
D P++ PA P +N+++ V S L++ + +C V L+ +S L++PY
Sbjct: 203 DAADLFPVLNPAQPTVNAAHAVGRSGLQLFFKELLRAEQLCASVPLS---YSELWKPYNI 259
Query: 102 FESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHE 155
+ +R ++ V I +AA D + AWKG+VES+LR L +E + P+P
Sbjct: 260 LDEHRFFVGVHISCEHPSLAACEDTINAWKGYVESKLRMLVYSLE----CVAEVRPFPRP 315
Query: 156 YVDTSK-------PCAHC---AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 200
VD S HC AFF G++ +V + D+ + EF+ S+
Sbjct: 316 VVDESPREVTRSGVTMHCRSRAFFFGVRNGNKDVARS----DVEAAFSEFEFSVT 366
>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L + FF ++ W W PV L P R MPI+ P P +
Sbjct: 305 LFTMFFGIFAHWPWHIPVDLHG-----------QPTNCRHSDGCLMPIVMPCTPPELCAS 353
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
N++ T R + ++ G + +++ + +W+ +FEP+ + +Y +L++ + A +++L
Sbjct: 354 NMTEGTFRKIREELMRGYVLTKDLGSHDFEWAWIFEPFPYSTTYGQFLRIALCAPTSEEL 413
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 172
W GWV+SR L L +E ++C P + VD + + + GL
Sbjct: 414 HDWIGWVKSRFPYLILKLENI---GIECDPNSSQEVDHTVIKPNTVYHWGL 461
>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
Length = 293
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 38 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 97
K RR MPI+ P P + N++ T + + ++ G + +E + +W LF
Sbjct: 84 KARRPDGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFA 143
Query: 98 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 157
P+ + Y +L++ + A +++L W GWV+SR R L L +E + G ++C P
Sbjct: 144 PFPYATKYEEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLE--SIG-VECDP------ 194
Query: 158 DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK---PGMEICVS 214
D+++ H F + G + + DI E+F + ++ K ++ +S
Sbjct: 195 DSTEEVDHTVFEPSIVCHWGLIYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMS 254
Query: 215 HIRRKQIPPYVF 226
+R Q+P ++
Sbjct: 255 IVRSSQLPKSLY 266
>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 1024
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ FF ++ W WP PV L G + + P + +RD+ MP++ PA P N++
Sbjct: 822 LLDYFFEMFAAWPWPLPVTLTP------GTARYVP-EGKRDQ---MPVVAPALPPRNTAR 871
Query: 62 NVSTSTLRVMMDQFQYGNTICEEV--ELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
NVS STLRV+ ++ + E W ALF P + V + A +
Sbjct: 872 NVSRSTLRVLREELARASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAKAHE 931
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK---P 176
D GW+ L L +E D +L P+P S+P F +GL +
Sbjct: 932 DRQVAAGWILGHLTALVYRLEGDR--RLFLRPFP-----PSQP--EGPFRIGLSAQGPEA 982
Query: 177 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 213
G+ + ++ +++EF+ S + + PG + V
Sbjct: 983 GQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLSV 1019
>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
Length = 1080
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ FF ++ W WP PV L G + + P + +RD+ MP++ PA P N++
Sbjct: 878 LLDYFFEMFAAWPWPLPVTLTP------GTARYVP-EGKRDQ---MPVVAPALPPRNTAR 927
Query: 62 NVSTSTLRVMMDQFQYGNTICEEV--ELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
NVS STLRV+ ++ + E W ALF P + V + A +
Sbjct: 928 NVSRSTLRVLREELARASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAKAHE 987
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK---P 176
D GW+ L L +E D +L P+P S+P F +GL +
Sbjct: 988 DRQVAAGWILGHLTALVYRLEGDR--RLFLRPFP-----PSQP--EGPFRIGLSAQGPEA 1038
Query: 177 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 213
G+ + ++ +++EF+ S + + PG + V
Sbjct: 1039 GQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLSV 1075
>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
Length = 1021
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+S FF + W WP PV L R K +P+I PA P N++
Sbjct: 808 LLSHFFGTFAAWPWPQPVTLTPETA----------RYRPEGKRDLLPVIAPALPARNTAR 857
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKA--QWSALFEPYLFFESYRNYLQVDIVAANAD 119
NVS ST RV+ ++ + ++A W+ALF+P E+ L++ + A A+
Sbjct: 858 NVSRSTYRVIREELLRARELVARARSSRAPSSWAALFQPLSAHETSPAALRLSVDAPTAE 917
Query: 120 DLLAWKGWVESRLRQLTLMIERD 142
D GW+ + L +E D
Sbjct: 918 DREVVAGWILGHVTALVYRLEGD 940
>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 500
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 42 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 101
D P++ PA P +N+++ V S L++ + + +C V + +SAL+EPY
Sbjct: 286 DAADLFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCSLVPM---PYSALWEPYNV 342
Query: 102 FESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHE 155
+ +R ++ V I +AA D + AWKG+VES+LR +E + P+P
Sbjct: 343 LDEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRMFVYALE----CVAEVRPFPCP 398
Query: 156 YVD----------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 200
VD + C AFF G++ +V D+ + EF+ ++
Sbjct: 399 VVDEPPRAVTRRGVTVHCRSRAFFFGVRNGNKDVAHS----DVESAFREFEFAVT 449
>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
Length = 500
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 40/226 (17%)
Query: 1 MLVSRFFRVYTMWRWPN----PVMLCAIDEAELGFSV------WDPRKNRRDKTHHMPII 50
+++ FF +Y W + PV + +DE V WD D P++
Sbjct: 238 VILRFFFSLYVWWLLRDTRIAPVSIVPMDENAAIARVPGMPPPWDAVW---DAADLFPVL 294
Query: 51 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 110
PA P +N+++ V S L++ + + +C V ++ +SAL+ PY + +R ++
Sbjct: 295 NPARPTVNAAHAVGRSGLQLFLKELLRAEQLCALVPMS---YSALWAPYNILDEHRFFVG 351
Query: 111 VDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD------ 158
V I +AA + + AWKG+VES+LR +E + P+P VD
Sbjct: 352 VHISSEHQSLAACEEAINAWKGYVESKLRMFVYALE----CVAEVRPFPRPVVDEPPRAV 407
Query: 159 ----TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 200
+ C AFF G++ +V D+ + EF+ ++
Sbjct: 408 TRRGVTVHCRSRAFFFGVRNGNNDVAHS----DVEAAFREFEFAVT 449
>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
Length = 472
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 9/74 (12%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
+VSRFF + + W WP PV+L ++E + + DK H MPIITP +P M +++
Sbjct: 248 IVSRFFHIMSKWEWPQPVLLKPMEEGPIYPA---------DKAHRMPIITPGFPSMCATH 298
Query: 62 NVSTSTLRVMMDQF 75
NV+ ST +MM++F
Sbjct: 299 NVTNSTRSIMMNEF 312
>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
Length = 500
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 32/222 (14%)
Query: 1 MLVSRFFRVYTMWRWPN----PVMLCAIDEAELGFSV------WDPRKNRRDKTHHMPII 50
+++ FF +Y W + PV + DE V WD D P++
Sbjct: 238 VILRFFFSLYVWWLLRDTRIAPVSIVPTDENAAIARVPGMPPPWDAVW---DAADLFPVL 294
Query: 51 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 110
PA P +N+++ V S L++ + + +C V ++ +SAL+EPY + +R ++
Sbjct: 295 NPARPTVNAAHAVGRSGLQLFLKELLRAEQLCALVPMS---YSALWEPYNILDEHRFFVG 351
Query: 111 VDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY---PHEYVDTSK 161
V I +AA D + AWKG+VES+LR +E + P P V
Sbjct: 352 VHISSEHQSLAACEDTINAWKGYVESKLRMFVYALECVAEVRPFSRPVVDEPPRVVTRRG 411
Query: 162 PCAHC---AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 200
HC AFF G++ +V + D+ + EF+ ++
Sbjct: 412 VKVHCRSRAFFFGVRNGNKDV----EHSDVEAAFREFEFAVT 449
>gi|344252871|gb|EGW08975.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 384
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 70 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 129
V +++F+ G I +E+ L+KA+WS FE FF+ ++Y+ + A L W G VE
Sbjct: 2 VAVEEFKQGLAITDEILLSKAKWSKFFEAPNFFQKCKHYIVLLASAPTEKQRLEWVGLVE 61
Query: 130 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIR 189
S++R L +E++ + L H P E+ + +GL K E E D+
Sbjct: 62 SKIRILVGSLEKNEFITL-AHVNP-EF--------RTIWVIGLVFKKTE-NSENLNVDLT 110
Query: 190 GSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFPEGYKRTRH 235
++ F + +IN MF + M+ H++RKQ +P YV KR +H
Sbjct: 111 YDIQSFMDTVYRQAINSKMF-ELDMKTAAMHVKRKQLHQLLPSYVL---QKRKKH 161
>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 1239
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 66/233 (28%)
Query: 2 LVSRFFRVYTMWRWPNPVML------CAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYP 55
++ +FF VY W+W +PV + V D MPI+TP
Sbjct: 291 IIYKFFEVYADWKWFDPVFIRVGKKKDKTKLDLNKLQVLDAYSQ-----DIMPILTPNTN 345
Query: 56 CMNSSYNVSTSTLRVMMDQFQYGNTICEEV------------------------------ 85
NS+Y V + T + +F G + +E+
Sbjct: 346 PKNSAYRVCSHTFDTICKEFTRGKNLMKELIPQSQKTIKPHPAALAKLALDQEETKLTVD 405
Query: 86 -------------------ELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKG 126
+ K W LF+ + FF+ Y ++L++DI++ + L W G
Sbjct: 406 ALQIQESNQESQVQSPVQKQKQKQSWIKLFQKFRFFDQYEHFLKIDILSTDESAHLKWLG 465
Query: 127 WVESRLRQLT-LMIERDTYGKLQCHPYP---HEYVDTSKPCAHC--AFFMGLQ 173
+VES+LR+L L+ + + L+ +P E DT C ++F+G++
Sbjct: 466 YVESQLRRLMQLLQDIEQISGLRIYPRSFNREETQDTINNAFKCCDSYFIGIK 518
>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
Length = 589
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR--DKTHHMPIITPAYPCMNS 59
L+S FF ++ W WP PV S+ DP R D MPI+ P P
Sbjct: 354 LLSLFFDIFAHWPWPLPV------------SLLDPPVLCRGPDGCSLMPIMLPCNPPEFC 401
Query: 60 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 119
S + + ST + ++ + G + ++ WS LF + + Y+ +L++ + A +
Sbjct: 402 SSSTTESTFSKIKEELRRGYALTKDTRSTDFDWSWLFASFPYGARYKCFLRIVLSAPLDE 461
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 172
+L W GWV+SR R L L +E + G + C P E VD + + FF GL
Sbjct: 462 ELRDWVGWVKSRFRNLLLKLE--SLG-VYCDPDSSEQVDHTITEPNVVFFWGL 511
>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 482
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 46 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 105
H+ I+ AY C + V F + + + QWS LFEP+ + + Y
Sbjct: 289 HLAILA-AYVCRKFPDASVSGLFAVFFQTFAHWPWQVPDPLRHDFQWSWLFEPFPYDQKY 347
Query: 106 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 165
+ +L++ + A +L W GWV+SR R L L +ER ++C P P E VD + +
Sbjct: 348 QQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGIECDPCPSEEVDHTDNDPN 404
Query: 166 CAFFMGLQRKPGEVVQ 181
F+ GL P ++Q
Sbjct: 405 VVFYWGL--IPKRIIQ 418
>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
Length = 447
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 36 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSAL 95
P RR MPI+ P P + N++ T + + ++ G + +E + +W L
Sbjct: 269 PTNCRRPDGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWL 328
Query: 96 FEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHE 155
F P+ + Y +L++ + A +++L W GWV+SR L+++ ++ G ++C P E
Sbjct: 329 FAPFPYATKYEEFLRIALCAPTSEELRDWAGWVKSR---FNLILKLESIG-VECDPDSTE 384
Query: 156 YVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF 195
VD H F + G + + DI E+F
Sbjct: 385 EVD------HTVFEPSIVCHWGLIYKTSTHIDISSLGEDF 418
>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
Length = 763
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 111/301 (36%), Gaps = 78/301 (25%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV +FF V++ W WPNPV+L K D ++P+ P
Sbjct: 266 LVHKFFLVFSKWEWPNPVLL----------------KQPEDSNLNLPVWDP--------- 300
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
RV + P + +Y+ + A+ ++
Sbjct: 301 -------RVSI------------------------TPVFYLLMVLHYIVLTASASTEENH 329
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGLQRKP- 176
L W G VES++R L +ER+ Y L H P + + + F F+G+ K
Sbjct: 330 LEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENRNENDFVSMWFIGIIFKKV 388
Query: 177 --GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 234
E V +DI+ + N K GM+I +H+++KQ+ Y+ PE ++ +
Sbjct: 389 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHQYLPPEVVQKKK 448
Query: 235 HPRLASQQRSSENGNEYQ-------------TGSGLKRKKDPESVDQDGPEKRQSISPQK 281
+A RSS G+ + T SG P + + S+SP K
Sbjct: 449 R-SIAELNRSSNGGSSKRFSLDNSHLDSSRDTDSGTPFNSPPSKTSKPASDTDDSVSPPK 507
Query: 282 Q 282
Q
Sbjct: 508 Q 508
>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
Length = 460
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 46 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 105
H+ I+ AY C V F + + + QW+ LFEP+ + + Y
Sbjct: 257 HLAILA-AYVCRKFPDASVNGLFAVFFQTFAHWPWQVPDSLRHDFQWTWLFEPFPYDKKY 315
Query: 106 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 165
+ +L++ + A +L W GWV+SR R L L +ER ++C P P E VD + +
Sbjct: 316 QQFLRIALCAPTFAELRDWAGWVKSRFRLLILKLER---AGIECDPCPSEEVDHTDNDPN 372
Query: 166 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 200
F+ GL P ++ Q D E+F SI
Sbjct: 373 VVFYWGL--IPERII----QVDTSSLKEDFMESIT 401
>gi|344256545|gb|EGW12649.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 349
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 21/180 (11%)
Query: 70 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 129
VM+++ + G I +E+ L+KA+WS LFE FF+ Y++Y+ + A L VE
Sbjct: 2 VMVEELKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAHTEKQRLECVDLVE 61
Query: 130 SRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQ 184
S++ L +E++ + KL Q P P + D K + +GL K E E
Sbjct: 62 SKICILVGSLEKNEFIKLAHVNPQSFPAPKDNPD--KEEFRTMWVIGLVFKKTE-NSENL 118
Query: 185 QFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFPEGYKRTRH 235
D+ ++ F +IN MF + M+I H++RKQ +P ++ KR +H
Sbjct: 119 SVDLTYDIQSFTDTVYSQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHML---QKRKKH 174
>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
Length = 1034
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
+L++ FF++ + W P+ L G + RK+R P+IT PC NS+
Sbjct: 832 ILLAHFFQILSQHDWTQPIALTE------GGKQYPVRKSR----EWFPVITSIEPCQNST 881
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
NV+ ST ++ + G I EEV W+ LFE E +L + + +A +
Sbjct: 882 RNVTRSTAEILRRELGRGAEIAEEVLAGNTAWTTLFESADLPEQSNAFLVLTVSSAEVGE 941
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 153
L GW+E L + +E+ KL H P
Sbjct: 942 LEKCGGWLEGNTIGLAINLEQ----KLNIHVRP 970
>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 467
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
ML+ FF ++ W W + +D F + DP M ++T +YP +NS
Sbjct: 248 MLIFHFFEYFSSWDWD---IQLNLDSNTPDFQLNDP----------MILMTQSYPQINSL 294
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 120
V+TS+ + ++ + Q ++ ++ W LF+ FF YR +L +D++ N+
Sbjct: 295 RAVTTSSRKRIIKELQRALETTKKALISDLSWQELFKGGCFFADYRYFLCIDLIPTNSQI 354
Query: 121 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 180
G++ S+L +L ++E + G + + +P + K F++GL K G
Sbjct: 355 KDEIIGFLSSKLTRLVKILE-EIPGICEANIWPSKISYGGK----IIFYIGLNTKSG--- 406
Query: 181 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 221
+ + DI + F I+ K M I IR+K++
Sbjct: 407 -QSKTIDINHAKNNFISYISSSTLGK-AMSINFKIIRKKEL 445
>gi|226500652|ref|NP_001146769.1| uncharacterized protein LOC100280371 [Zea mays]
gi|219888671|gb|ACL54710.1| unknown [Zea mays]
Length = 214
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 201 MYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLK 258
MY WKPGM++ V+H+ R+Q+P YVF +GYK+ A+QQ S+ + S LK
Sbjct: 1 MYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCPTMHANQQEQSDGDGTFSPYLESQLK 60
Query: 259 RKKDPES---VDQDGPEKRQSISP 279
RK + VD KR S+SP
Sbjct: 61 RKYISDGDGHVDLCKSVKRASVSP 84
>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
IL3000]
Length = 356
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 39/202 (19%)
Query: 1 MLVSRFFRVYTMWR----WPNPVMLCAIDEAELGF----SVWDPRKNR--RDKTHHMPII 50
+L+ FF YT W +PV L A E+ W P KN RD P+I
Sbjct: 105 VLLRFFFLFYTQWMSRHDHISPVYLTATLESRGRIPGLPESWKPAKNECFRDL---FPVI 161
Query: 51 TPAYPCMNSSYNVSTSTLRVM---MDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 107
+PAYP +N + NV L + + Q Q + + + L K L+ PY E + +
Sbjct: 162 SPAYPYVNDASNVGRCGLESLYSEITQAQRVISASDTLSLEK-----LWRPYCIMEDFAH 216
Query: 108 YLQVDIVA-----ANADDLLA-WKGWVESRLRQLTLMIERDTYGKLQCHPYPHE------ 155
+L V++ + A+A+ +L W +V S+LR L +ER + + P+PH+
Sbjct: 217 FLLVEVSSLGDDMADAERILGRWGSYVGSKLRFLIYSVERFVHAR----PHPHKLRAKMD 272
Query: 156 --YVDTSKPCAHCAFFMGLQRK 175
+VD C+ F +G++ K
Sbjct: 273 GTFVDRKVCCSSIYFLIGVRSK 294
>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
Length = 167
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 52
LV +FF V++ W WPNPV+L ++ L VW PR D+ H MPIITP
Sbjct: 117 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSDRYHLMPIITP 167
>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
Length = 1067
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L++ FF + W P+ A+ +A +SV PR +PIIT PC N++
Sbjct: 884 LLANFFNHLNQYNWRQPI---ALTDAGKQYSVQVPRD-------LLPIITSIEPCQNTAR 933
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
N++ ST ++ +F + +E+ WS+LFEP + +L + ++ + L
Sbjct: 934 NITRSTAEILSGEFARATEMTQEIAAGNLDWSSLFEPINLQQESDIFLNLKLIGNDKQQL 993
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 156
G++E + ++L+I+ + +G + P+ Y
Sbjct: 994 EKECGYLEGYI--ISLIIQLENHG-IFVRPWAEMY 1025
>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 485
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 34 WDPRKNR-RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 92
WDPR++ RD +P+I PAYP +N + NV +L V + Y + +E
Sbjct: 277 WDPRRDACRDDL--LPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRLLSNLE---TPL 331
Query: 93 SALFEPYLFFESYRNYLQVDIVAANADD------LLAWKGWVESRLRQLTLMIERDTYGK 146
A++EPY + Y + V + ++ L W +V S+LR L +ER
Sbjct: 332 EAIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER----I 387
Query: 147 LQCHPYPHEYVD--------TSKPCAHCAFFMGLQRKPGEVVQEGQQF 186
+ PYP + D + + F +G++ K G + F
Sbjct: 388 VDARPYPQKLNDGPPRSAPKSGRFLKGSCFIVGIKEKVGRRFPQKNMF 435
>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 274
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 21/130 (16%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAEL----GF---SVWDPRKNRRDKTHHMP------ 48
LV RFFRVY+ W W + +E GF VW P R +P
Sbjct: 145 LVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPKRTTTDQPLPLAASPM 204
Query: 49 -IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE--VELNKAQ-WSALFEPYLFFE- 103
+ITPAYP MNS++ V+ ++ + + + G I V+L + W L EP FF+
Sbjct: 205 AVITPAYPSMNSTFGVTRMSMDTIKKELERGAGIISSKGVDLRSRECWETLLEPIHFFDY 264
Query: 104 ---SYRNYLQ 110
Y+ +LQ
Sbjct: 265 DQGGYKQFLQ 274
>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 285
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 34 WDPRKNR-RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 92
WDPR++ RD +P+I PAYP +N + NVS L V + Y + + E
Sbjct: 77 WDPRRDACRDDL--LPVINPAYPYVNDARNVSRCGLEVFYAELTYAHRLLSNSE---TPL 131
Query: 93 SALFEPYLFFESYRNYLQVDIVAANADD------LLAWKGWVESRLRQLTLMIERDTYGK 146
+++P+ ++Y + V++ + L W +V S+LR L +ER
Sbjct: 132 ETIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWSSYVLSKLRILLYALER----I 187
Query: 147 LQCHPYPHEYVDT---SKPCAHC-----AFFMGLQRKPGEVVQEGQQF 186
+ PYP + D S P + C +F +G++ K G + F
Sbjct: 188 VDARPYPQKLNDVPLRSVPKSGCFLKGSSFIVGIREKVGRRFPQKNMF 235
>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
Length = 1016
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L++ FF+ + W WP PV A+ + G+ +RD MP+I PA P N++
Sbjct: 813 LLAHFFQTFASWPWPQPV---ALTQETAGYRP----DGKRDL---MPVIAPAEPLRNTAR 862
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKA--QWSALFEPYLFFESYRNYLQVDIVAANAD 119
NVS ST R + ++ + + + W LF+P L++ + A +
Sbjct: 863 NVSRSTFRTVREELVRARELVTGARASSSPHAWEPLFQPVDAPRDLPARLRLSVEAPTPE 922
Query: 120 DLLAWKGWVESRLRQLTLMIERD 142
A GWV L L +E D
Sbjct: 923 AHEAAMGWVLGHLTALVYRLEGD 945
>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
Length = 494
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLC----AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
M++SRFF +++ W W PVML I+ ++ ++ N MPI++P +P
Sbjct: 240 MILSRFFSMWSQWPWQMPVMLTDYIPGINGTKIEYNSLAEFDNAV-----MPIVSPCHPV 294
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
N + V+ ST R+M +F+ G T+ + A LF P + + Y++++ + +
Sbjct: 295 CNVAPYVTKSTRRIMQIEFERGWTLLNKNAHPFAIIDKLFNPVNYTQRYKHFINIVTSST 354
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 176
W + +++ + +IE D LQ P KP + +Q K
Sbjct: 355 TITSHDTWVRKMATQIPRYLELIESDP-NILQAQP-------IMKPKQITIRYRTIQEKI 406
Query: 177 ----GEVVQEGQQFDIRGSVEEFKLSINMY 202
G+ +QE + D G++ L + Y
Sbjct: 407 SLQNGDTLQEAKLNDFAGTLSPGTLYLAYY 436
>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
AltName: Full=Polynucleotide adenylyltransferase
gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
Length = 522
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 2 LVSRFFRVYTMWRW-PNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
L+ +FF+VY+ W W PVML D+ N + K + I+TPA P N++
Sbjct: 233 LLEKFFQVYSSWDWLRTPVMLGTNDDF-----------NDKKKEGVIQILTPASPSENAA 281
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVDIVAANAD 119
++++ +L ++ + + G I E W+ LF+P F Y +++ + +++ +
Sbjct: 282 FSITKFSLEMIKRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLE 341
Query: 120 DLLAWKGWVESRLRQL 135
L G ES L L
Sbjct: 342 GLTTTIGKFESGLVNL 357
>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
Length = 522
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 2 LVSRFFRVYTMWRW-PNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
L+ +FF+VY+ W W PVML D+ N + K + I+TPA P N++
Sbjct: 233 LLEKFFQVYSSWDWLRTPVMLGTNDDF-----------NDKKKEGIIQILTPASPSENAA 281
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVDIVAANAD 119
++++ +L ++ + + G I E W+ LF+P F Y +++ + +++ +
Sbjct: 282 FSITKFSLEMIKRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLE 341
Query: 120 DLLAWKGWVESRLRQL 135
L G ES L L
Sbjct: 342 GLTTTIGKFESGLVNL 357
>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
Length = 521
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 2 LVSRFFRVYTMWRWPN-PVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
L+ +FF+VY+ W W PVML D+ N + K + I+TPA P N++
Sbjct: 233 LLEKFFQVYSSWDWLRAPVMLGTNDDF-----------NDKKKEGVIQILTPASPSENAA 281
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVDIVAANAD 119
++++ +L ++ + + G I E W+ LF+P F Y +++ + +++ +
Sbjct: 282 FSITKFSLELIKRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLE 341
Query: 120 DLLAWKGWVESRLRQL 135
L G ES L L
Sbjct: 342 GLTTTIGKFESGLVNL 357
>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1251
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 21/145 (14%)
Query: 2 LVSRFFRVYTMWRWPNPVML-----CAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 56
L+ FF W WP P++L + +G SV MP++TP +P
Sbjct: 1010 LMHAFFVHVANWPWPQPILLNMPLGATLPADAIGESV-------------MPVMTPTWPT 1056
Query: 57 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 116
NS+ VS STL VM + Q G + + + A A+ +P + L V +
Sbjct: 1057 RNSARVVSVSTLSVMRAELQRGADLTAAADCSLA---AVADPLGVSTLAKGILVVQLQCL 1113
Query: 117 NADDLLAWKGWVESRLRQLTLMIER 141
N +L GW+ SRL L +ER
Sbjct: 1114 NKSELERGAGWLLSRLGVLVHELER 1138
>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 285
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 24/168 (14%)
Query: 34 WDPRKNR-RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 92
WDPR++ RD +P+I PAYP +N + NV +L V + Y + +E
Sbjct: 77 WDPRRDACRDDL--LPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRLLSNLE---TPL 131
Query: 93 SALFEPYLFFESYRNYLQVDIVAANADD------LLAWKGWVESRLRQLTLMIERDTYGK 146
++EPY + Y + V + ++ L W +V S+LR L +ER
Sbjct: 132 ETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER----L 187
Query: 147 LQCHPYPHEYVD--------TSKPCAHCAFFMGLQRKPGEVVQEGQQF 186
+ PYP + D + + F +G++ K G + F
Sbjct: 188 VDARPYPQKLNDGPPRSVPKSGRFLKGSCFIVGIKEKVGRRFPQKNLF 235
>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 285
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 24/168 (14%)
Query: 34 WDPRKNR-RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 92
WDPR++ RD +P+I PAYP +N + NV L V + Y + +E
Sbjct: 77 WDPRRDACRDDL--LPVINPAYPYVNDARNVGRCGLEVFYAELTYAYRLLSNLE---TPL 131
Query: 93 SALFEPYLFFESYRNYLQVDIVAANADD------LLAWKGWVESRLRQLTLMIERDTYGK 146
++EPY + Y + V + ++ L W +V S+LR L +ER
Sbjct: 132 ETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER----I 187
Query: 147 LQCHPYPHEYVD-----TSKP---CAHCAFFMGLQRKPGEVVQEGQQF 186
+ PYP + D KP F +G++ K G + F
Sbjct: 188 VDARPYPQKLNDVPPRSVPKPGRFLKGSCFIVGIKEKVGRRFPQKNMF 235
>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
Length = 363
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 28 ELGFSV--WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV 85
ELGF W + + + ++TP YP MN++ +S S+L+ + Q + E++
Sbjct: 152 ELGFDEENWSDKPSNFSNHDSLVLLTPTYPRMNTARTISRSSLQFIRSQ---ARRVYEKI 208
Query: 86 ELNKAQWSALF---EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD 142
+ S L EPY FFE + Y +V + A+ + W G VES++R L +
Sbjct: 209 KSYVDGESTLLQMVEPYQFFEGFPIYFEVLVSASANSEFKDWLGLVESKIRYLVFFLSLR 268
Query: 143 TYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 172
+ +P P V S A C F++GL
Sbjct: 269 I-ENVALNPNP--IVSKSNSNAAC-FYIGL 294
>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
Length = 528
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 39 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQ 76
N D+ H MPIITPAYP NS+YNVSTST VM+++F+
Sbjct: 216 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFK 253
>gi|297726257|ref|NP_001175492.1| Os08g0278750 [Oryza sativa Japonica Group]
gi|255678316|dbj|BAH94220.1| Os08g0278750, partial [Oryza sativa Japonica Group]
Length = 103
Score = 53.1 bits (126), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 1 MLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFSVWDPRKNRR--DKTHHMP 48
ML+ RFFRV+ W+WP+PVMLCAI D+ ELG R +R + H+P
Sbjct: 40 MLLPRFFRVFARWKWPSPVMLCAIEHDDGELGLKRHPARHHRAACRRQRHLP 91
>gi|358342231|dbj|GAA49742.1| poly(A) polymerase [Clonorchis sinensis]
Length = 373
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 78 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTL 137
G T+ + L+K WS LFEP FF YR+Y+ V + + L G VESRLR L
Sbjct: 32 GLTVSSDALLHKQPWSNLFEPAFFFR-YRHYVVVIVTGSAKRSFLELCGLVESRLRVLVS 90
Query: 138 MIERDTYGKL---QCHPY 152
E + Y K+ C Y
Sbjct: 91 NFELNRYVKIAHVNCRSY 108
>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
Length = 1037
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 15/172 (8%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L++ FF++ + W + L ELG + + +PII+ PC N++
Sbjct: 818 LLANFFQILSQHNWRQTIAL-----TELG-----KQHQVKLPQDLLPIISSIEPCKNTAR 867
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
N++ ST +++ D+F I + + K W++L+EP L ++I+ +
Sbjct: 868 NITRSTAKILRDEFARAAEISTNILVGKDAWTSLYEPIDLTIGTNALLSIEILDTDEQCR 927
Query: 122 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 173
+ES + LT+ +E +L P+ + TS+ + F+ L+
Sbjct: 928 QKCSDLLESTIIGLTIQLE-----QLDVFVRPNPQISTSESKSIFTLFLQLR 974
>gi|261327018|emb|CBH09993.1| poly(A) polymerase [Trypanosoma brucei gambiense DAL972]
Length = 487
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 77/197 (39%), Gaps = 28/197 (14%)
Query: 2 LVSRFFRVYTMWR----WPNPVMLCAIDEAELGF----SVWDPRKNRRDKTHHMPIITPA 53
L+ FF YT W +PV L A E W P K++ P+I+PA
Sbjct: 237 LLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSKDK-ICCDLFPVISPA 295
Query: 54 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 113
YP +N + +V L + + I EV + ++EPY E Y +L V +
Sbjct: 296 YPYVNDASSVGRCGLEALYSEITRVQCILTEVRTLPLE--EMWEPYRIEEEYSTFLVVGV 353
Query: 114 ------VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHE-------YVDTS 160
+A L W +V SRLR L IER Q P P + +V S
Sbjct: 354 SCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPCPRKIRLKKDNHVGGS 409
Query: 161 KPCAHCAFFMGLQRKPG 177
F +G++ K G
Sbjct: 410 SCFLSVNFLIGVKAKEG 426
>gi|72386969|ref|XP_843909.1| poly(A) polymerase [Trypanosoma brucei]
gi|62359037|gb|AAX79486.1| poly(A) polymerase [Trypanosoma brucei]
gi|70800441|gb|AAZ10350.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 487
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 74/193 (38%), Gaps = 20/193 (10%)
Query: 2 LVSRFFRVYTMWR----WPNPVMLCAIDEAELGF----SVWDPRKNRRDKTHHMPIITPA 53
L+ FF YT W +PV L A E W P K++ P+I+PA
Sbjct: 237 LLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSKDK-ICCDLFPVISPA 295
Query: 54 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 113
YP +N + +V L + + C E ++EPY E Y +L V +
Sbjct: 296 YPYVNDASSVGRCGLEALYSEIT--RVQCILTEARTLPLEEMWEPYRIEEEYSTFLVVGV 353
Query: 114 ------VAANADDLLAWKGWVESRLRQLTLMIERDTYGK---LQCHPYPHEYVDTSKPCA 164
+A L W +V SRLR L IER + + P +V S
Sbjct: 354 SCAGHSMAETEQALSVWSSYVASRLRILIYSIERHAQARPCPRKIRPKKDNHVGGSSCFL 413
Query: 165 HCAFFMGLQRKPG 177
F +G++ K G
Sbjct: 414 SVNFLIGVKAKEG 426
>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 482
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 17/181 (9%)
Query: 2 LVSRFFRVYTMWRWP-NPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 60
L+ +FF Y W W NPVML V D R R+ K + +ITPA P NS
Sbjct: 233 LLEKFFHAYATWDWARNPVML----------GVSDDRPERK-KEEMVQVITPAAPRENSM 281
Query: 61 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVDIVAANAD 119
YN++ S+L ++ + G I + + W+ LF+ F Y +++ V + +
Sbjct: 282 YNMTRSSLELLKREMLRGERIVKGYKSEGGNDWNLLFKKRHCFCGYYIFVEFS-VRGSLE 340
Query: 120 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 179
L G ES++ + +E + ++ + P Y++ + +++G+ K +
Sbjct: 341 SLENKIGMFESKIVRFVRSLE-EMEEVIEVNVIPEGYLEVENAVDY--YYVGMNVKKDLL 397
Query: 180 V 180
V
Sbjct: 398 V 398
>gi|7108951|gb|AAF36551.1|AF201909_1 polyA polymerase [Trypanosoma brucei]
Length = 487
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 75/197 (38%), Gaps = 28/197 (14%)
Query: 2 LVSRFFRVYTMWR----WPNPVMLCAIDEAELGF----SVWDPRKNRRDKTHHMPIITPA 53
L+ FF YT W +PV L A E W P K++ P+I+PA
Sbjct: 237 LLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSKDK-ICCDLFPVISPA 295
Query: 54 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 113
YP +N + +V L + + C E ++EPY E Y +L V +
Sbjct: 296 YPYVNDASSVGRCGLEALYSEIT--RVQCILTEARTLPLEEMWEPYRIEEEYSTFLVVGV 353
Query: 114 ------VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHE-------YVDTS 160
+A L W +V SRLR L IER Q P P + +V S
Sbjct: 354 SCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPCPRKIRLKKDNHVGGS 409
Query: 161 KPCAHCAFFMGLQRKPG 177
F +G++ K G
Sbjct: 410 SCFLSVNFLIGVKAKEG 426
>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
Length = 253
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 32/89 (35%)
Query: 68 LRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGW 127
LRV +Q G+ +C+E IV A A W GW
Sbjct: 148 LRVTTEQLAVGDDVCQE----------------------------IVKAGA----MWVGW 175
Query: 128 VESRLRQLTLMIERDTYGKLQCHPYPHEY 156
VESRLRQL+ +E DT G L CH +P Y
Sbjct: 176 VESRLRQLSARVEADTSGVLLCHLHPQAY 204
>gi|294939632|ref|XP_002782536.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239894204|gb|EER14331.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 157
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 88 NKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL 147
N+ W+ L P+ FF+ YR +L ++I A L +KG VESR+R L +E K+
Sbjct: 16 NEVTWADLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKV 75
Query: 148 QCHPYP 153
P+P
Sbjct: 76 LPQPHP 81
>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
Length = 317
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 37
LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
Length = 304
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 37
LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
Length = 317
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 37
LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
Length = 303
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 37
LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 254 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 289
>gi|295664162|ref|XP_002792633.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278747|gb|EEH34313.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1260
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++ FF Y + W ++ I F PR NR + M I+T YP MN +
Sbjct: 857 ILRTFFNHYADFYWMEGMVYDMI------FHRKQPRYNRSPR-EGMVILTLHYPIMNVAR 909
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF-------EPYL------FFESYRNY 108
S S++R ++D+ +T+ E L +W++L +P L F +SY +Y
Sbjct: 910 TASISSMRTIVDEMDRADTLISEGRL---RWTSLVGITPQAGQPTLSNSADEFLKSYNSY 966
Query: 109 LQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 157
+++++ A L+ GW+ESR L I R LQ +P +
Sbjct: 967 IKINVQYWGLSLAKGSSLI---GWLESRCLFLLADIHR-KLPDLQTRIWPARFT 1016
>gi|340052780|emb|CCC47065.1| putative polynucleotide adenylyltransferase [Trypanosoma vivax
Y486]
Length = 486
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 27/183 (14%)
Query: 34 WDPRKNRRDKTHH--MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ 91
WDP +K H +P++ PAYP +N + V L V + + + E
Sbjct: 277 WDPAL---EKFSHDLLPVLNPAYPFVNDANAVGRCGLEVFYSEVTRAHHLLSTTE--SFP 331
Query: 92 WSALFEPYLFFESYRNYLQVDIVA------ANADDLLAWKGWVESRLRQLTLMIERDTYG 145
+++PY + + ++L V + +DL W +V S+LR L +E
Sbjct: 332 LEDVWKPYSITDDFSSFLLVQVSCDGNSEEGVENDLEVWSSYVASKLRILIYAVE----C 387
Query: 146 KLQCHPYPHEYVDTSKPCAH--------CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKL 197
+ PYPH+ D C F +G++ + Q+ Q +++EF+
Sbjct: 388 IVDARPYPHKLKDRVATSLLGPQHIRRGCVFLIGVRERKDR--QKLHQSMFSSALDEFRY 445
Query: 198 SIN 200
++
Sbjct: 446 AVQ 448
>gi|327293125|ref|XP_003231259.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
gi|326466375|gb|EGD91828.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
Length = 1216
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 33/177 (18%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV+ FF Y + W N +++ + + RR M I+T P +N +
Sbjct: 826 LVAMFFHHYAHFDWKNNMVVSPGVQT----------RYRRSLREPMVILTVHAPTINVAR 875
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-----------LFFESYRNYLQ 110
V+T +LR ++ F+ + E + A+WS + F +Y++Y++
Sbjct: 876 AVTTPSLRTIVSAFKRAEELMGE---DGAKWSNILNDISISHNNQTGAEKFLAAYKSYIK 932
Query: 111 VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 162
V++ A L+ GW+ESR +L ++R G + +P + P
Sbjct: 933 VNVQYWGPSPTQASSLI---GWLESRFFRLLNDLDRQVLG-IHGRIWPARFTSIDAP 985
>gi|212536855|ref|XP_002148583.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
gi|210068325|gb|EEA22416.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
Length = 1206
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
++S FF Y + W N ++ E F P+ +R + M I++ P +N ++
Sbjct: 821 IISDFFFYYENFDWKNDMVY------ETTFYTGTPKYHRLSR-EPMVILSIHPPKVNVAH 873
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP---YLFFESYRNYLQVDI--VAA 116
+ S++ + +F+ + EV A W + +P F E+Y +Y++VD+ A
Sbjct: 874 ASTVSSVHTLEQEFKRAAQLISEV---GATWKNIADPSGVVQFLEAYSSYIKVDVHYWAK 930
Query: 117 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 158
A A GW+E R L + I R + + +P + D
Sbjct: 931 AAAKGRALFGWLEFRCVSLLVNINRG-FPDIHARIWPARFTD 971
>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
Length = 309
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 37
+VSRFF + W WP PV+L I+E L VW+P+
Sbjct: 250 IVSRFFIIMYQWTWPQPVLLKQIEEGPLQVRVWNPK 285
>gi|340501019|gb|EGR27841.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 306
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 8/155 (5%)
Query: 47 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 106
M IITPAYP N++ V +++ + N + + W + E F Y+
Sbjct: 124 MHIITPAYPEYNTTDRVKMINFNIIVAKLIASNDYIQNQK--NIVWEKIVEKENFINHYK 181
Query: 107 NYLQVDIVAANADDL---LAWKGWVESRLRQLTLMIERDTYG--KLQCHPYPHEYVDTSK 161
++++D++ ++ +A K + RL L ++ Y K++ P+P +
Sbjct: 182 LFIEIDLIQNKKGEIGQFIAQKKYFALRLLNLFDQLKGIEYDPEKIEVRPWPIFFDKKDP 241
Query: 162 PCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEF 195
+C AF +GL+ K + VQ Q I G ++
Sbjct: 242 DYPYCAAFLIGLKNKMHQPVQYSLQEWIVGFAKQL 276
>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1151
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 41/199 (20%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LV+ FF Y + W N ++ ++ F PR NR + M ++ P N ++
Sbjct: 761 LVTSFFHHYGQFDWTNEMVY------DVFFHKKRPRYNRSAR-EPMVVLGFHAPNSNIAH 813
Query: 62 NVSTSTLRVMMDQFQY-GNTICEEVELNKAQWSALF----------EPYL----FFESYR 106
+ L+ ++ +F+ G +CE+ W A F P L F E+Y
Sbjct: 814 TSTVPGLQTLVKEFKAAGERLCEQ----GMTWDAFFGLGPTLSSVSSPSLGAAGFLETYH 869
Query: 107 NYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 161
N+++VDI L+ GWVESR L + I + T + +P + +
Sbjct: 870 NFVKVDIQFWGRTLTKGKSLV---GWVESRCISLIVEIHK-TLPNSEVRIWPGRFTNNET 925
Query: 162 PCA------HCAFFMGLQR 174
A H + +GL +
Sbjct: 926 SAADESRDYHGCYLIGLSK 944
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 36/129 (27%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGF-------------------SVWDPRKNRRD 42
+ +FF+ Y+ W WPNP++L + GF +W+P D
Sbjct: 555 FLLKFFKFYSSWEWPNPIIL------DQGFYDQENLLNPNGQQVKMNVKKIWNPISCIGD 608
Query: 43 KTHHMPIITP--------AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA 94
H MPII+P N++ V S L++ + +F+ I +++ K +
Sbjct: 609 SQHLMPIISPQIKINTQKTITSTNTADQVLNSNLQIYLYEFKRAYKIMKKIYKGKIKLKE 668
Query: 95 L---FEPYL 100
L FE ++
Sbjct: 669 LGSAFESFI 677
>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 413
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDE-AELG---FSVWDPR 37
LV RFF + + W W NPV LC I + +E+G F VW+P+
Sbjct: 266 LVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPK 305
>gi|376259447|ref|YP_005146167.1| dockerin-like protein [Clostridium sp. BNL1100]
gi|373943441|gb|AEY64362.1| dockerin-like protein [Clostridium sp. BNL1100]
Length = 504
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 358 VEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL--NAGLGSVLQSTSGI 415
+ G +++ SDC D D ++EN L A D +H EL+L N G +VL+S GI
Sbjct: 264 ITGGTLNITATSDCIDTDGDIIIENGTL-ALSAGDDGIHSELDLTFNGGTTTVLKSYEGI 322
Query: 416 DSETVVQKPVMRLSLTST 433
+ +TV +++T+T
Sbjct: 323 EGKTVTTVNNGTINITAT 340
>gi|302499068|ref|XP_003011530.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
gi|291175082|gb|EFE30890.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
Length = 1209
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 32/160 (20%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
LVS FF Y + W N +++ + + RR M I+T P +N +
Sbjct: 826 LVSMFFHYYAHFDWKNNMVVSPGVQT----------RYRRSLREPMVILTVHVPTINVAR 875
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-----------LFFESYRNYLQ 110
V+ +LR ++ F + E + A+WS + F +Y +Y++
Sbjct: 876 AVTAPSLRTIVSAFNRAEELMGE---DGARWSNILNDISISHNNQTGAEKFLTAYNSYIK 932
Query: 111 VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYG 145
V++ A L+ GW+ESR +L ++R G
Sbjct: 933 VNVQYWGPSPTQASSLI---GWLESRFFRLLNDLDRQALG 969
>gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
Length = 982
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 2 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 61
L+ FF + W P+ L + G S + RK+R MP+++ YP N++
Sbjct: 797 LLQNFFDLLAQHSWVIPIGL------QEGTSSYIVRKHR----DWMPVVSAFYPYKNTTR 846
Query: 62 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 121
N++ ST +V+ + Q + + +N W F + Y L +++ A+N +L
Sbjct: 847 NLTQSTAKVIQGEIQKARLLLQNTSIN---WLTFFAATDVQKEYTQLLILELSASNEQNL 903
Query: 122 LAWKGWVESRLRQLTLMIERDT 143
+G + L + L +E+
Sbjct: 904 ELAQGKLLGSLLGVILALEQQV 925
>gi|194696942|gb|ACF82555.1| unknown [Zea mays]
Length = 131
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 118 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG 177
++L W GWV+SR R L L +E + G + C P P E VD + + FF GL
Sbjct: 2 GEELRDWVGWVKSRFRNLLLKLE--SLG-VYCDPDPSEQVDHTITDPNVVFFWGL----- 53
Query: 178 EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM---EICVSHIRRKQIPPYVFPEGYKRTR 234
+ + Q I E+F S+ ++ K +I +S + Q+P VF +
Sbjct: 54 -IYRRNIQICISSLKEDFMKSVCNNIYGKEKCAHSDITMSIVGPPQLPKSVFDLSVYSEK 112
Query: 235 HPR-LASQQRSSENGN 249
P+ + Q +N N
Sbjct: 113 LPQHMMGHQLMKQNYN 128
>gi|221484307|gb|EEE22603.1| 4-nitrophenylphosphatase, putative [Toxoplasma gondii GT1]
Length = 593
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 17/123 (13%)
Query: 244 SSENGNEYQTGSGLKRKKD---------PESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 294
+S NG G L R+ D P ++ GPEK S+SP+ + LS D AP S
Sbjct: 20 ASSNGAMRSLGQRLSRQDDASGSCGSTCPAALSPSGPEKLHSLSPRAKSCLS-DSAAPPS 78
Query: 295 VRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV------GSCEDVGNESVA 348
T + V+ + G + ++++V+T + SE G C G E V+
Sbjct: 79 ASPLTLTRTA-VLTGSVTFREVPRAGAEATSNAVVTCICSECVTRLTDGCCARCGRECVS 137
Query: 349 GSS 351
++
Sbjct: 138 AAT 140
>gi|237838251|ref|XP_002368423.1| 4-nitrophenylphosphatase, putative [Toxoplasma gondii ME49]
gi|211966087|gb|EEB01283.1| 4-nitrophenylphosphatase, putative [Toxoplasma gondii ME49]
Length = 593
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Query: 244 SSENGNEYQTGSGLKRKKD---------PESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 294
+S NG G L R+ D P ++ GPEK S+SP+ + LS D AP S
Sbjct: 20 ASSNGAMRSLGQRLSRQDDASGSCGSTCPAALSPSGPEKLHSLSPRAKSCLS-DSAAPPS 78
Query: 295 VRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV------GSCEDVGNESVA 348
T + V+ + G + +++ V+T + SE G C G E V+
Sbjct: 79 ASPLTLTRTA-VLTGSVTFREVPRAGAEATSNGVVTCICSECVTRLTDGCCARCGRECVS 137
Query: 349 GSS 351
++
Sbjct: 138 AAT 140
>gi|221505715|gb|EEE31360.1| 4-nitrophenylphosphatase, putative [Toxoplasma gondii VEG]
Length = 593
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Query: 244 SSENGNEYQTGSGLKRKKD---------PESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 294
+S NG G L R+ D P ++ GPEK S+SP+ + LS D AP S
Sbjct: 20 ASSNGAMRSLGQRLSRQDDTSGSCGSTCPAALSPSGPEKLHSLSPRAKSCLS-DSAAPPS 78
Query: 295 VRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV------GSCEDVGNESVA 348
T + V+ + G + +++ V+T + SE G C G E V+
Sbjct: 79 ASPLTLTRTA-VLTGSVTFREVPRAGAEATSNGVVTCICSECVTRLTDGCCARCGRECVS 137
Query: 349 GSS 351
++
Sbjct: 138 AAT 140
>gi|431822613|gb|AGA84149.1| heparin binding antigen, partial [Neisseria meningitidis]
Length = 311
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 232 RTRHPRLASQQR---SSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPD 288
R RHP SQ S+EN TG+G D + +GP+ + DSL+P+
Sbjct: 16 RARHPHKVSQDMAAVSAEN-----TGNGGAATTDKPKNEDEGPQNDMPQNAADTDSLTPN 70
Query: 289 HLAPSSVRSGTGSNVEP-----VIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVG 343
H ++ +G N P P+ + D++N+ E+ G
Sbjct: 71 HTTAPNMPAGNMGNQAPDTGESAQPENKP---------DMANAGDGIQGDDPSAGGENAG 121
Query: 344 NESVAGSSEGNNGSVEGSNNPVSS 367
N + G+++ N GS NP SS
Sbjct: 122 NTAAQGTNQAENNQAAGSQNPASS 145
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,995,230,275
Number of Sequences: 23463169
Number of extensions: 296897502
Number of successful extensions: 850350
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 391
Number of HSP's that attempted gapping in prelim test: 847627
Number of HSP's gapped (non-prelim): 2177
length of query: 434
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 289
effective length of database: 8,957,035,862
effective search space: 2588583364118
effective search space used: 2588583364118
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)