BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013883
(434 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 291 bits (745), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 213/345 (61%), Gaps = 1/345 (0%)
Query: 90 RLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVP 149
+L + TTIFTQMS LA +H AINL QGFP+FDGP ++++ + G NQYA GV
Sbjct: 11 KLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQ 70
Query: 150 EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA 209
AIA + ++ G + D + ++TVT+G TEA+ A I L+ GDEVI F P YDSY
Sbjct: 71 ALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP 130
Query: 210 TLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269
++++G +K + L+PP F + +E + +S+ TR +++NTPHNP+ ++ + + +
Sbjct: 131 AIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQ 190
Query: 270 LCIENDVLVFSDEVYDKLAF-EMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 328
+++ V SDEVY+ + F + H S+ + P + ER V ++S GKT+ +TGWK+G+ +A
Sbjct: 191 AIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVA 250
Query: 329 PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG 388
P ++ +R+ H +LTF+ +TP Q A LRA +Y L Y K+ ILV LN
Sbjct: 251 PAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESR 310
Query: 389 FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
++ P GTYF++VD++ D+ FC++L +E GV AIP SVF
Sbjct: 311 LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVF 355
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 208/348 (59%), Gaps = 3/348 (0%)
Query: 89 KRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGV 148
RL + TT+F +MS LA + GA+NLGQGFP+ DGP + AA AI G NQY G G
Sbjct: 5 SRLRPYATTVFAEMSALATRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGS 64
Query: 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE 208
AIA++ ++ G++ DPE EV VT G TEAIAA +LGL+ PG EV+L PFYDSY
Sbjct: 65 APLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYS 124
Query: 209 ATLSMAGAKIKCITLRPP--DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266
++MAGA + L P FA+ + L+ ++ TRA+++N+PHNPTG + + EL
Sbjct: 125 PVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAA 184
Query: 267 IASLCIENDVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGW 325
IA + + +++V +DEVY+ L F+ H+ +A GM ERT+T++S F+ TGWKIGW
Sbjct: 185 IAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW 244
Query: 326 AIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLN 385
A P L GVR A +L++ P Q A AL + + L+ A++ L GL
Sbjct: 245 ACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLT 304
Query: 386 AVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
+GF V S GTYF+ D P G++ FC L ++VGV AIP S F
Sbjct: 305 EIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAF 352
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 212/376 (56%), Gaps = 32/376 (8%)
Query: 88 AKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQA-IRDGKNQYARGH 146
AKR+E + ++ + + LA +NLGQGFP+ P +VK+ +A D NQY RG
Sbjct: 2 AKRIEGLDSNVWVEFTKLAADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGF 61
Query: 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS 206
G P A++ + K ++DP +E+ V G ++ +I GL++PGDEVI+ PFYD
Sbjct: 62 GHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDC 121
Query: 207 YEATLSMAGAKIKCITLRPP----------DFAIPIEELKSTISKNTRAILMNTPHNPTG 256
YE + MAGA I LR D+ EL+S S T+AI++NTPHNP G
Sbjct: 122 YEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLG 181
Query: 257 KMFTREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMNSLGKT 315
K++TR+EL VIA LC+++D L SDEVY+ L + H+ IA+LPGM+ERT+T+ S GKT
Sbjct: 182 KVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKT 241
Query: 316 FSLTGWKIGWAIAPPHLTWGVR--QAHSFLTFATSTPMQ-------WAATAALRAPETYY 366
FS+TGWK+GW+I P HL ++ Q +SF T A TP+Q W + PE Y+
Sbjct: 242 FSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCA--TPLQAALAEAFWIDIKRMDDPECYF 299
Query: 367 EELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHET---------DIAFCE 417
L ++ K+ +V LN+VG K G YF++ D + G + D F +
Sbjct: 300 NSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVK 359
Query: 418 YLIKEVGVVAIPTSVF 433
++ K + AIP S F
Sbjct: 360 WMTKHKKLTAIPVSAF 375
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/376 (38%), Positives = 211/376 (56%), Gaps = 32/376 (8%)
Query: 88 AKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQA-IRDGKNQYARGH 146
AKR+E + ++ + + LA +NLGQGFP+ P +VK+ +A D NQY RG
Sbjct: 2 AKRIEGLDSNVWVEFTKLAADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGF 61
Query: 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS 206
G P A++ + K ++DP +E+ V G ++ +I GL++PGDEVI+ PFYD
Sbjct: 62 GHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDC 121
Query: 207 YEATLSMAGAKIKCITLRPP----------DFAIPIEELKSTISKNTRAILMNTPHNPTG 256
YE + MAGA I LR D+ EL+S S T+AI++NTPHNP G
Sbjct: 122 YEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLG 181
Query: 257 KMFTREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMNSLGKT 315
K++TR+EL VIA LC+++D L SDEVY+ L + H+ IA+LPGM+ERT+T+ S G T
Sbjct: 182 KVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGXT 241
Query: 316 FSLTGWKIGWAIAPPHLTWGVR--QAHSFLTFATSTPMQ-------WAATAALRAPETYY 366
FS+TGWK+GW+I P HL ++ Q +SF T A TP+Q W + PE Y+
Sbjct: 242 FSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCA--TPLQAALAEAFWIDIKRMDDPECYF 299
Query: 367 EELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHET---------DIAFCE 417
L ++ K+ +V LN+VG K G YF++ D + G + D F +
Sbjct: 300 NSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVK 359
Query: 418 YLIKEVGVVAIPTSVF 433
++ K + AIP S F
Sbjct: 360 WMTKHKKLTAIPVSAF 375
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 206/382 (53%), Gaps = 32/382 (8%)
Query: 85 QQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDG--KNQY 142
Q A+RL+ + + LA +H +NLGQGFP+F PDF +A A+ NQY
Sbjct: 4 QLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQY 63
Query: 143 ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAP 202
+ G P +AS F + G E+DP + V VT G A+ L++ GDEVI+ P
Sbjct: 64 TKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEP 123
Query: 203 FYDSYEATLSMAGAKIKCITLRP-----------PDFAIPIEELKSTISKNTRAILMNTP 251
F+D YE MAG + ++L+P ++ + EL + T+A+++NTP
Sbjct: 124 FFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTP 183
Query: 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMN 310
+NP GK+F+REEL ++ASLC ++DV+ +DEVY + ++ HISIASLPGM+ERT+T+
Sbjct: 184 NNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIG 243
Query: 311 SLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAA-------LRAPE 363
S GKTFS TGWK+GW + P H+ +R H F T Q A + R P
Sbjct: 244 SAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPS 303
Query: 364 TYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHET-----------D 412
+Y+ + + + ++ L +VG K G+YF++ D + F + D
Sbjct: 304 SYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYD 363
Query: 413 IAFCEYLIKEVGVVAIPTSVFY 434
F +++IK G+VAIP S+FY
Sbjct: 364 RRFVKWMIKNKGLVAIPVSIFY 385
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 247 bits (631), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 205/382 (53%), Gaps = 32/382 (8%)
Query: 85 QQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDG--KNQY 142
Q A+RL+ + + LA +H +NLGQGFP+F PDF +A A+ NQY
Sbjct: 4 QLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQY 63
Query: 143 ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAP 202
+ G P +AS F + G E+DP + V VT G A+ L++ GDEVI+ P
Sbjct: 64 TKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEP 123
Query: 203 FYDSYEATLSMAGAKIKCITLRP-----------PDFAIPIEELKSTISKNTRAILMNTP 251
F+D YE MAG + ++L+P ++ + EL + T+A+++NTP
Sbjct: 124 FFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTP 183
Query: 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMN 310
+NP GK+F+REEL ++ASLC ++DV+ +DEVY + ++ HISIASLPGM+ERT+T+
Sbjct: 184 NNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIG 243
Query: 311 SLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAA-------LRAPE 363
S G TFS TGWK+GW + P H+ +R H F T Q A + R P
Sbjct: 244 SAGXTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPS 303
Query: 364 TYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHET-----------D 412
+Y+ + + + ++ L +VG K G+YF++ D + F + D
Sbjct: 304 SYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYD 363
Query: 413 IAFCEYLIKEVGVVAIPTSVFY 434
F +++IK G+VAIP S+FY
Sbjct: 364 RRFVKWMIKNKGLVAIPVSIFY 385
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 205/382 (53%), Gaps = 32/382 (8%)
Query: 85 QQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDG--KNQY 142
Q A+RL+ + + LA +H +NLGQGFP+F PDF +A A+ NQY
Sbjct: 4 QLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQY 63
Query: 143 ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAP 202
+ G P +AS F + G E+DP + V VT G A+ L++ GDEVI+ P
Sbjct: 64 TKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEP 123
Query: 203 FYDSYEATLSMAGAKIKCITLRP-----------PDFAIPIEELKSTISKNTRAILMNTP 251
F+D YE MAG + ++L+P ++ + EL + T+A+++NTP
Sbjct: 124 FFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTP 183
Query: 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMN 310
+NP GK+F+REEL ++ASLC ++DV+ +DEVY + ++ HISIASLPGM+ERT+T+
Sbjct: 184 NNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIG 243
Query: 311 SLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAA-------LRAPE 363
S G TFS TGWK+GW + P H+ +R H F T Q A + R P
Sbjct: 244 SAGXTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPS 303
Query: 364 TYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHET-----------D 412
+Y+ + + + ++ L +VG K G+YF++ D + F + D
Sbjct: 304 SYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYD 363
Query: 413 IAFCEYLIKEVGVVAIPTSVFY 434
F +++IK G+VAIP S+FY
Sbjct: 364 RRFVKWMIKNKGLVAIPVSIFY 385
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 207/391 (52%), Gaps = 30/391 (7%)
Query: 74 SDTIQKTNLQPQQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQ 133
S T +T + KR + +++ + LA ++ +NLGQGFP++ P + +A
Sbjct: 2 SSTSNETMHNKFDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDYHAPKYALNALAA 61
Query: 134 AIRDGK---NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL 190
A NQY RG G P A++ + + ++P EV VT G EA+ ATI G
Sbjct: 62 AANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGH 121
Query: 191 INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP---------PDFAIPIEELKSTISK 241
++ GDEVI+ PF+D YE + AG + I L+P D+ + EL++ ++
Sbjct: 122 VDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE 181
Query: 242 NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASLP 300
T+ I++NTPHNP GK+ R EL V+A+LC + +VL SDEVY+ + FE +HI I +LP
Sbjct: 182 KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLP 241
Query: 301 GMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAA-- 358
GM+ERT+T+ S GKTFSLTGWKIGWA P L ++ H + +TP+Q A
Sbjct: 242 GMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFE 301
Query: 359 -----LRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDI 413
L++PE Y+ + + AK+ + L VG G YF+V D + + D+
Sbjct: 302 TELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDL 361
Query: 414 A----------FCEYLIKEVGVVAIPTSVFY 434
F +++ K VG+ IP S FY
Sbjct: 362 TQETDARKDYRFTKWMTKSVGLQGIPPSAFY 392
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 206/391 (52%), Gaps = 30/391 (7%)
Query: 74 SDTIQKTNLQPQQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQ 133
S T +T + KR + +++ + LA ++ +NLGQGFP++ P + +A
Sbjct: 2 SSTSNETMHNKFDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDYHAPKYALNALAA 61
Query: 134 AIRDGK---NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL 190
A NQY RG G P A++ + + ++P EV VT G EA+ ATI G
Sbjct: 62 AANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGH 121
Query: 191 INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP---------PDFAIPIEELKSTISK 241
++ GDEVI+ PF+D YE + AG + I L+P D+ + EL++ ++
Sbjct: 122 VDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE 181
Query: 242 NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASLP 300
T+ I++NTPHNP GK+ R EL V+A+LC + +VL SDEVY+ + FE +HI I +LP
Sbjct: 182 KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLP 241
Query: 301 GMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAA-- 358
GM+ERT+T+ S G TFSLTGWKIGWA P L ++ H + +TP+Q A
Sbjct: 242 GMWERTITIGSAGXTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFE 301
Query: 359 -----LRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDI 413
L++PE Y+ + + AK+ + L VG G YF+V D + + D+
Sbjct: 302 TELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDL 361
Query: 414 A----------FCEYLIKEVGVVAIPTSVFY 434
F +++ K VG+ IP S FY
Sbjct: 362 TQETDARKDYRFTKWMTKSVGLQGIPPSAFY 392
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 132/353 (37%), Positives = 194/353 (54%), Gaps = 29/353 (8%)
Query: 90 RLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVP 149
R E K +IF +MS LA + GA+NLGQGFP+ P F+ +A +A+ ++QYA G+P
Sbjct: 6 RTEAAKESIFPRMSGLAQRLGAVNLGQGFPSNPPPPFLLEAVRRAL-GRQDQYAPPAGLP 64
Query: 150 EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA 209
A+A F V+PE V VTSG TEA+ + L+ PGDEV++ PF+D Y
Sbjct: 65 ALREALAEEFA------VEPES-VVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP 117
Query: 210 TLSMAGAKIKCITLR--PPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267
+AGAK + + L P F + + L+ ++ TRA+L+NTP NPTG +F EL I
Sbjct: 118 DAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAI 177
Query: 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAI 327
A L +D+ + SDEVYD+L + + ERT T+ S GK TG+++GW +
Sbjct: 178 ARLARAHDLFLISDEVYDELYYGERPRRLREF--APERTFTVGSAGKRLEATGYRVGWIV 235
Query: 328 AP----PHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILV 381
P P L G+RQ + +F+ TP+Q AL+ E +YE L+ Y ++ +L
Sbjct: 236 GPKEFMPRLA-GMRQ---WTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLA 291
Query: 382 EGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434
GL A+G +V+ GTYF++ + + AF L++E V IP S FY
Sbjct: 292 GGLRAMGLRVYVPEGTYFLMAELPGWD-----AF--RLVEEARVALIPASAFY 337
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 202/358 (56%), Gaps = 18/358 (5%)
Query: 87 VAKRLEKFK--TTIFTQMSMLAIKHGAINL---GQGFPNFDGPDFVKDAAIQAIRDGKNQ 141
+++R++ K T+ L ++ ++L G P+FD P+ VK+AA +A+ GK +
Sbjct: 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK 63
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFA 201
YA G+PE A+A +F++++GL V PE E VT G ++A+ +++PGDEVI+ +
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPE-ETIVTVGGSQALFNLFQAILDPGDEVIVLS 122
Query: 202 PFYDSYEATLSMAGAKIKCITLRPPDFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFT 260
P++ SY + AG + + P + +P E ++ I+ T+A+++N+P+NPTG ++
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY--ERTVTMNSLGKTFSL 318
+E L +A L +E+D + SDE+Y+ L +E +H S PG E T+T+N K F++
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAM 238
Query: 319 TGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAAL---RAPETYYEELKRDYSA 375
TGW+IG+A P + + S T + T QWA AL A + E + Y
Sbjct: 239 TGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRR 298
Query: 376 KKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
++ +L+EGL A+G K SG ++V++D +P + ++ E L+ E GV +P + F
Sbjct: 299 RRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPD-EVRAAERLL-EAGVAVVPGTDF 354
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 201/358 (56%), Gaps = 18/358 (5%)
Query: 87 VAKRLEKFK--TTIFTQMSMLAIKHGAINL---GQGFPNFDGPDFVKDAAIQAIRDGKNQ 141
+++R++ K T+ L ++ ++L G P+FD P+ VK+AA +A+ GK +
Sbjct: 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK 63
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFA 201
YA G+PE A+A +F++++GL V PE E VT G +A+ +++PGDEVI+ +
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPE-ETIVTVGGKQALFNLFQAILDPGDEVIVLS 122
Query: 202 PFYDSYEATLSMAGAKIKCITLRPPDFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFT 260
P++ SY + AG + + P + +P E ++ I+ T+A+++N+P+NPTG ++
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY--ERTVTMNSLGKTFSL 318
+E L +A L +E+D + SDE+Y+ L +E +H S PG E T+T+N K F++
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAM 238
Query: 319 TGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAAL---RAPETYYEELKRDYSA 375
TGW+IG+A P + + S T + T QWA AL A + E + Y
Sbjct: 239 TGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRR 298
Query: 376 KKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
++ +L+EGL A+G K SG ++V++D +P + ++ E L+ E GV +P + F
Sbjct: 299 RRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPD-EVRAAERLL-EAGVAVVPGTDF 354
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 194/352 (55%), Gaps = 30/352 (8%)
Query: 112 INLGQGFPNFDGPDFVKDAAIQAIR-DGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPE 170
INLGQGF ++ P F A +A+ NQY+ G P +++ + E+ E
Sbjct: 60 INLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAE 119
Query: 171 KEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP---- 226
VTVT+G E I + ++GL+N GDEVI+F PF+D Y + + G K+ + + PP
Sbjct: 120 N-VTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELD 178
Query: 227 -------DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVF 279
++ I E+ + I+ T+A+++NTPHNP GK+FTREEL + ++C++++V++
Sbjct: 179 QRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVII 238
Query: 280 SDEVYDKLAFEMDHISIASL-PGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVR 337
SDEVY+ L F IA+L P + + T+T+ S G +F+ TGW+IGW ++ L
Sbjct: 239 SDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGWVLSLNAELLSYAA 298
Query: 338 QAHSFLTFATSTPMQWAATAALRAPET--YYEELKRDYSAKKAILVEGLNAVGFKVFPSS 395
+AH+ + FA+ +P+Q A ++ Y+E+++++Y K I + +G
Sbjct: 299 KAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPE 358
Query: 396 GTYFVVVDHT--------PFGHET-----DIAFCEYLIKEVGVVAIPTSVFY 434
GTYFV+VD + P+ E D +LI E+GVVAIP + FY
Sbjct: 359 GTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFY 410
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 188/329 (57%), Gaps = 11/329 (3%)
Query: 112 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEK 171
I+LG G P+FD P +K+ A +A+ G Y G+ E AIA + KK +G+E DP+
Sbjct: 28 ISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKT 87
Query: 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAK-IKCITLRPPDFAI 230
E+ V G +A + + G+EV++ P + SY + +AG K ++ T +F +
Sbjct: 88 EIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRL 147
Query: 231 PIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF- 289
++ELK ++ TRA+++N+P NPTG + T+++L IA +E+D++V SDEVY+ +
Sbjct: 148 NVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYD 207
Query: 290 EMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATST 349
+ H SIASL GM+ERT+T+N KTF++TGW++G+ AP +W + + F + +
Sbjct: 208 DARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAP---SWIIERMVKFQMYNATC 264
Query: 350 P---MQWAATAALRAPETY--YEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDH 404
P +Q+AA AL+ ++ EE++++Y ++ ++ + LN +G G +++
Sbjct: 265 PVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRI 324
Query: 405 TPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
G T F E ++KE V +P S F
Sbjct: 325 RDTGL-TSKKFSELMLKEARVAVVPGSAF 352
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 188/329 (57%), Gaps = 11/329 (3%)
Query: 112 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEK 171
I+LG G P+FD P +K+ A +A+ G Y G+ E AIA + KK +G+E DP+
Sbjct: 29 ISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKT 88
Query: 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAK-IKCITLRPPDFAI 230
E+ V G +A + + G+EV++ P + SY + +AG K ++ T +F +
Sbjct: 89 EIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRL 148
Query: 231 PIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF- 289
++ELK ++ TRA+++N+P NPTG + T+++L IA +E+D++V SDEVY+ +
Sbjct: 149 NVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYD 208
Query: 290 EMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATST 349
+ H SIASL GM+ERT+T+N KTF++TGW++G+ AP +W + + F + +
Sbjct: 209 DARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAP---SWIIERMVKFQMYNATC 265
Query: 350 P---MQWAATAALRAPETY--YEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDH 404
P +Q+AA AL+ ++ EE++++Y ++ ++ + LN +G G +++
Sbjct: 266 PVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRI 325
Query: 405 TPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
G T F E ++KE V +P S F
Sbjct: 326 RDTGL-TSKKFSELMLKEARVAVVPGSAF 353
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 201/358 (56%), Gaps = 18/358 (5%)
Query: 87 VAKRLEKFK--TTIFTQMSMLAIKHGAINL---GQGFPNFDGPDFVKDAAIQAIRDGKNQ 141
+++R++ K T+ L ++ ++L G P+FD P+ VK+AA +A+ GK +
Sbjct: 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK 63
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFA 201
YA G+PE A+A +F++++GL V PE E VT G ++A+ +++PGDEVI+ +
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPE-ETIVTVGGSQALFNLFQAILDPGDEVIVLS 122
Query: 202 PFYDSYEATLSMAGAKIKCITLRPPDFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFT 260
P++ SY + AG + + P + +P E ++ I+ T+A+++N+P+NPTG ++
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY--ERTVTMNSLGKTFSL 318
+E L +A L +E+D + SDE+Y+ L +E +H S PG E T+T+N K F++
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAM 238
Query: 319 TGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAAL---RAPETYYEELKRDYSA 375
TGW+IG+A P + + T + T QWA AL A + E + Y
Sbjct: 239 TGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRR 298
Query: 376 KKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
++ +L+EGL A+G K SG ++V++D +P + ++ E L+ E GV +P + F
Sbjct: 299 RRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPD-EVRAAERLL-EAGVAVVPGTDF 354
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 200/358 (55%), Gaps = 18/358 (5%)
Query: 87 VAKRLEKFK--TTIFTQMSMLAIKHGAINL---GQGFPNFDGPDFVKDAAIQAIRDGKNQ 141
+++R++ K T+ L ++ ++L G P+FD P+ VK+AA +A+ GK +
Sbjct: 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK 63
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFA 201
YA G+PE A+A +F++++GL V PE E VT G +A+ +++PGDEVI+ +
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPE-ETIVTVGGKQALFNLFQAILDPGDEVIVLS 122
Query: 202 PFYDSYEATLSMAGAKIKCITLRPPDFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFT 260
P++ SY + AG + + P + +P E ++ I+ T+A+++N+P+NPTG ++
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY--ERTVTMNSLGKTFSL 318
+E L +A L +E+D + SDE+Y+ L +E +H S PG E T+T+N F++
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAXAFAM 238
Query: 319 TGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAAL---RAPETYYEELKRDYSA 375
TGW+IG+A P + + S T + T QWA AL A + E + Y
Sbjct: 239 TGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRR 298
Query: 376 KKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
++ +L+EGL A+G K SG ++V++D +P + ++ E L+ E GV +P + F
Sbjct: 299 RRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPD-EVRAAERLL-EAGVAVVPGTDF 354
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 188/328 (57%), Gaps = 13/328 (3%)
Query: 112 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEK 171
+ L G P+FD P+ VK+AA +A+ GK +YA G+PE A+A +F++++GL V PE
Sbjct: 34 VALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPE- 92
Query: 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIP 231
E VT G ++A+ +++PGDEVI+ +P++ SY + AG + + P + +P
Sbjct: 93 ETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVP 152
Query: 232 -IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE 290
E ++ I+ T+A+++N+P+NPTG ++ +E L +A L +E+D + SDE+Y+ L +E
Sbjct: 153 DPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYE 212
Query: 291 MDHISIASLPGMY--ERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348
+H S PG E T+T+N K F++TGW+IG+A P + + T +
Sbjct: 213 GEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPD 268
Query: 349 TPMQWAATAAL---RAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHT 405
T QWA AL A + E + Y ++ +L+EGL A+G K SG ++V++D +
Sbjct: 269 TIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTS 328
Query: 406 PFGHETDIAFCEYLIKEVGVVAIPTSVF 433
P + ++ E L+ E GV +P + F
Sbjct: 329 PIAPD-EVRAAERLL-EAGVAVVPGTDF 354
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 188/328 (57%), Gaps = 13/328 (3%)
Query: 112 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEK 171
+ L G P+FD P+ VK+AA +A+ GK +YA G+PE A+A +F++++GL V PE
Sbjct: 34 VALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPE- 92
Query: 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIP 231
E VT G ++A+ +++PGDEVI+ +P++ SY + AG + + P + +P
Sbjct: 93 ETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVP 152
Query: 232 -IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE 290
E ++ I+ T+A+++N+P+NPTG ++ +E L +A L +E+D + SDE+Y+ L +E
Sbjct: 153 DPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYE 212
Query: 291 MDHISIASLPGMY--ERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348
+H S PG E T+T+N K F++TGW+IG+A P + + T +
Sbjct: 213 GEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPD 268
Query: 349 TPMQWAATAAL---RAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHT 405
T QWA AL A + E + Y ++ +L+EGL A+G K SG ++V++D +
Sbjct: 269 TIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTS 328
Query: 406 PFGHETDIAFCEYLIKEVGVVAIPTSVF 433
P + ++ E L+ E GV +P + F
Sbjct: 329 PIAPD-EVRAAERLL-EAGVAVVPGTDF 354
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 177 bits (449), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 175/330 (53%), Gaps = 11/330 (3%)
Query: 107 IKHG--AINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSG 164
IK G INL G P+F P+ V + A++ ++ G+ +Y G+ E IA R +
Sbjct: 37 IKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYK 96
Query: 165 LEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCI-TL 223
++ P+ +V VT+G +A+ + L++PGDEVI+F+P + SY + +AG + + T
Sbjct: 97 KDISPD-QVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETF 155
Query: 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEV 283
+F +EE++ + T+A+L+N+P+NPTG ++ RE L + L + + + SDEV
Sbjct: 156 MSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEV 215
Query: 284 YDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 343
YD L + + SI + ++R V +N K+ S+TGW++G+ I+ + V + S
Sbjct: 216 YDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHT 275
Query: 344 TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVD 403
T +T Q+AA AL +Y + + + +K +VE L +G K G +++
Sbjct: 276 TSCINTVAQYAALKALEVDNSY---MVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFK 332
Query: 404 HTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
D+ FCE L++E V +P S F
Sbjct: 333 V----RGDDVKFCERLLEEKKVALVPGSAF 358
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 185/357 (51%), Gaps = 11/357 (3%)
Query: 86 QVAKRLEKFK--TTIFTQMSMLAIKHGAINL---GQGFPNFDGPDFVKDAAIQAIRDGKN 140
++A R+E T+ A+K I++ G P+F+ P + +AA A+ GK
Sbjct: 2 KLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKT 61
Query: 141 QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILF 200
+Y G P AIA + ++D+GL + + VT+G ++I +L +I PGDEVI+
Sbjct: 62 RYGPAAGEPRLREAIAQKLQRDNGLCYGADN-ILVTNGGKQSIFNLMLAMIEPGDEVIIP 120
Query: 201 APFYDSYEATLSMA-GAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMF 259
APF+ SY + +A G + T F + E+++ I+ T+ ++ NTP NPTG ++
Sbjct: 121 APFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVY 180
Query: 260 TREELNVIASLCIENDVLVFSDEVYDKLAF-EMDHISI-ASLPGMYERTVTMNSLGKTFS 317
T +E+ IA + +E + V SDE+Y+K+ + + H+SI A+ P YER+V + KT++
Sbjct: 181 TPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYA 240
Query: 318 LTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKK 377
+TGW++G+ P L + T T Q+ A AA + +E+ ++ ++
Sbjct: 241 MTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERR 300
Query: 378 AILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
+++ LNA+ G + G +++ G + + FC L+ + V +P + F
Sbjct: 301 RYMLDALNAMPGLECPKPDGAFYMFPSIAKTGR-SSLDFCSELLDQHQVATVPGAAF 356
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 164/311 (52%), Gaps = 19/311 (6%)
Query: 101 QMSMLAIKHGAINLGQGFP-NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRF 159
++ IK +N+G +F P+ +K+A +AI++G N Y G+PE AI R
Sbjct: 32 ELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVERE 91
Query: 160 KKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAK-I 218
K+ +G+++ P+ +V VT+ TEA+ L++PGDE+++ P Y Y + G K +
Sbjct: 92 KRKNGVDITPD-DVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPV 150
Query: 219 KCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLV 278
+ T+ D+ I++++ I+ T+AI + P+NPTG ++ ++ L I ++ E ++ V
Sbjct: 151 EYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPV 210
Query: 279 FSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWA--IAPPHLTWGV 336
SDE+YD + +E +HIS SL + MN L K + TGW++G+ + P + V
Sbjct: 211 ISDEIYDLMTYEGEHISPGSLTKDVP-VIVMNGLSKVYFATGWRLGYMYFVDPENKLSEV 269
Query: 337 RQAHSFLT---FATSTPMQWAATAALRAPETYYEEL------KRDYSAKKAILVEGLNAV 387
R+A L +TP Q+AA A L P Y +E +RDY K+ + G++
Sbjct: 270 REAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTT 329
Query: 388 ----GFKVFPS 394
F +FP
Sbjct: 330 KPQGAFYIFPK 340
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 171/353 (48%), Gaps = 12/353 (3%)
Query: 90 RLEKFKTTIFTQMSMLAIKHGA--INLGQGFPNFDGP---DFVKDAAIQAIRDGKNQYAR 144
RL + I ++ M A + G I+L G P DGP V+ A R+ + Y+
Sbjct: 16 RLPPYVFNITAELKMAARRRGEDIIDLSMGNP--DGPTPPHIVEKLCTVAQREDTHGYST 73
Query: 145 GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFY 204
G+P AI+ ++ +++DPE E VT G E +A +L ++ GD +++ P Y
Sbjct: 74 SRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSY 133
Query: 205 DSYEATLSMAGAKIKCITLRPP-DFAIPIEE-LKSTISKNTRAILMNTPHNPTGKMFTRE 262
+ +AGA+++ + L P DF +E ++ +I K R +++ P NPT + +
Sbjct: 134 PIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPK-PRMMILGFPSNPTAQCVELD 192
Query: 263 ELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMNSLGKTFSLTGW 321
+ +L + DV+V D Y + ++ SI +PG + V +L K++++ GW
Sbjct: 193 FFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGW 252
Query: 322 KIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381
+IG+ + P L + + S+ + T TP+Q AA AAL + ++ R Y ++ +LV
Sbjct: 253 RIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLV 312
Query: 382 EGLNAVGFKV-FPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
+GL G+ V P + Y P+ H + F + L+++ V P F
Sbjct: 313 KGLREAGWMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGF 365
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 169/352 (48%), Gaps = 28/352 (7%)
Query: 87 VAKRLEKFKTTIFTQMSMLAIKHG-------AINLGQGFPNFDGPDFVKDAAIQAIRDGK 139
++KRL F++ F M +LA+ I+L G P+F+ P + D I+++++GK
Sbjct: 2 LSKRLLNFES--FEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGK 59
Query: 140 NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVIL 199
Y G+ E I+ +K ++ P+ + +T G + + + +I+ GDEV++
Sbjct: 60 THYTDSRGILELREKISELYKDKYKADIIPDN-IIITGGSSLGLFFALSSIIDDGDEVLI 118
Query: 200 FAPFYDSYEATLSMAGAK-IKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
P Y Y+ + GAK + C DF + E L+ +S T+AI++N+P NP G++
Sbjct: 119 QNPCYPCYKNFIRFLGAKPVFC------DFTV--ESLEEALSDKTKAIIINSPSNPLGEV 170
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSL 318
RE I EN + SDE+Y+ L +E S E+T+ +N +++
Sbjct: 171 IDRE----IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAM 226
Query: 319 TGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAAL-RAPETYYEELKRDYSAKK 377
TGW+IG+ I+ + + + L + T Q+AA A + E + +++ ++
Sbjct: 227 TGWRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRR 286
Query: 378 AILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429
++++ + G++V G Y+V + G E F L+KE V P
Sbjct: 287 RLVLKYVKDFGWEVNNPIGAYYVFPNIGEDGRE----FAYKLLKEKFVALTP 334
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 151/299 (50%), Gaps = 19/299 (6%)
Query: 112 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQ---YARGHGVPEFNSAIASRFKKDSGLEVD 168
+N+GQ P+ P+ + I + K + Y+ G+ E A AS +K+ ++V
Sbjct: 48 LNIGQ--PDLKTPEVF----FERIYENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVK 101
Query: 169 PEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPD- 227
PE V VT+G +EAI + + NPGDE+++ PFY +Y A +AG K+ +T R +
Sbjct: 102 PEN-VLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRXEEG 160
Query: 228 FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKL 287
FAIP + L+S I++ T+ I+++ P NPTG ++ ++E + + + + + DEVY ++
Sbjct: 161 FAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEI 219
Query: 288 AFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 347
F + S S+ ++ V ++S+ FS G ++G I + A
Sbjct: 220 VFRGEFASALSIES--DKVVVIDSVSXKFSACGARVGCLITRNEEL--ISHAXKLAQGRL 275
Query: 348 STPM--QWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPS-SGTYFVVVD 403
+ P+ Q + L +++++ ++ Y + +++ L G K F SG +++ +
Sbjct: 276 APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAE 334
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 154/351 (43%), Gaps = 6/351 (1%)
Query: 87 VAKRLEKFKTTIFTQMSMLAIKHGA---INLGQGFPNFDGPDFVKDAAIQAIRDGKNQ-Y 142
++ +L + F + I+HG IN G P+ P + D +A+ +NQ Y
Sbjct: 22 ISNKLANIPDSYFGKTXGRKIEHGPLPLINXAVGIPDGPTPQGIIDHFQKALTIPENQKY 81
Query: 143 ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAP 202
HG F AI +++ + +D E EV + G + A +INPGD V+L P
Sbjct: 82 GAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDP 141
Query: 203 FYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTRE 262
Y Y A + +A K + L PP + ++ S I T+ I + P+NPTG T+E
Sbjct: 142 GYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKE 201
Query: 263 ELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWK 322
+ + D + D Y F+ + SI + + + + SL K ++ +G++
Sbjct: 202 VFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNXSGFR 261
Query: 323 IGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVE 382
+G+A+ +++ + +Q AA AL + + EE + ++
Sbjct: 262 VGFAVGNKDXIQALKKYQTHTNAGXFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEA 321
Query: 383 GLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
L + G +V ++ TP G++++ F ++L++E ++ P F
Sbjct: 322 XLAKADLPFVHAKGGIYVWLE-TPPGYDSE-QFEQFLVQEKSILVAPGKPF 370
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 153/332 (46%), Gaps = 21/332 (6%)
Query: 118 FPNFDGPDFVKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFK-KDSGLEVDPEKEVTV 175
F N V A A+ GK N YA G +AS + ++ LE K+V +
Sbjct: 44 FGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLSSREEVASYYHCPEAPLEA---KDVIL 100
Query: 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEE 234
TSGC++AI + L NPG +++ P + Y G ++K L P + I +++
Sbjct: 101 TSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWEIDLKQ 160
Query: 235 LKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF-EMDH 293
L+S I + T +++N P NP G +F++ L I ++ V + +DE+Y + F + +
Sbjct: 161 LESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIYGDMVFSDCKY 220
Query: 294 ISIASLPGMYERTVTMNSLGKTFSLTGWKIGW-AIAPPHLTWG--VRQAHSFLT---FAT 347
+A+L ++ L + + GW++GW I +G +R L+
Sbjct: 221 EPMATL-STNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGP 279
Query: 348 STPMQWAATAAL-RAPETYYEELKRDYSAKKAILVEGLNAV-GFK-VFPSSGTYFVV--- 401
T +Q A + L R P+ +Y++ + + L+A+ G + V PS Y +V
Sbjct: 280 CTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQPVRPSGAMYLMVGIE 339
Query: 402 VDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
++H P E D+ F E LI E V +P + F
Sbjct: 340 MEHFP-EFENDVEFTERLIAEQSVHCLPATCF 370
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 150/332 (45%), Gaps = 21/332 (6%)
Query: 118 FPNFDGPDFVKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFK-KDSGLEVDPEKEVTV 175
F N V A A+ GK N YA G IAS + ++ LE K+V +
Sbjct: 67 FGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEA---KDVIL 123
Query: 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEE 234
TSGC++AI + L NPG +++ P + Y+ G ++K L P + I +++
Sbjct: 124 TSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQ 183
Query: 235 LKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF-EMDH 293
L+ I + T +++N P NP G +F++ L I ++ V + +DE+Y + F + +
Sbjct: 184 LEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKY 243
Query: 294 ISIASLPGMYERTVTMNSLGKTFSLTGWKIGW-AIAPPHLTWG--VRQAHSFLT---FAT 347
+A+L ++ L K + + GW++GW I +G +R L+
Sbjct: 244 EPLATL-STDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGP 302
Query: 348 STPMQWAATAAL-RAPETYYEELKRDYSAKKAILVEGLNAV-GFK-VFPSSGTYFVV--- 401
T +Q A + L R P +Y + + L A+ G + V PS Y +V
Sbjct: 303 CTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIE 362
Query: 402 VDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
++H P E D+ F E L+ E V +P + F
Sbjct: 363 MEHFP-EFENDVEFTERLVAEQSVHCLPATCF 393
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 133/300 (44%), Gaps = 24/300 (8%)
Query: 133 QAIRDGKNQ--YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL 190
QAI D Q Y + E A+ K + D E ++ G AI+ I
Sbjct: 51 QAIHDYAEQLVYGYTYASDELLQAVLDWEKSEHQYSFDKE-DIVFVEGVVPAISIAIQAF 109
Query: 191 INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPD--FAIPIEELKSTISKN-TRAIL 247
G+ V++ +P Y + ++ + K+ +L+ + F I E+L++ I +N + L
Sbjct: 110 TKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYL 169
Query: 248 MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA-FEMDHISIASL-PGMYER 305
+ PHNP G+++ RE L I LC ++ V++ SDE++ L F +H+S ++ P +
Sbjct: 170 LCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDF 229
Query: 306 TVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPET 364
+ ++S KTF++ G K +AI P L + + + + AT ET
Sbjct: 230 ALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIAT------ET 283
Query: 365 YYEELKRDYSAKKAILVEGLN---------AVGFKVFPSSGTYFVVVDHTPFGHETDIAF 415
Y K A KA+L E + A KV GTY + +D + +G D F
Sbjct: 284 AYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALF 343
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 137/334 (41%), Gaps = 41/334 (12%)
Query: 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRD----GKNQYARGHGVPEFNSAIASRFKKDS 163
K + G P+ P V D + + D + Y G E +AIA
Sbjct: 34 KENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTH 93
Query: 164 GLEVDPEKEVTVTSGCTEAIAATILGLINPG-DEVILFAPFYDSYEATLSMAGAKIKCIT 222
G + + + T G +++ L + DE I AP++ Y+ ++ AGA++ +
Sbjct: 94 GTHFNADN-LYXTXGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVP 152
Query: 223 LRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLC------IENDV 276
F I + L+ I+ +TR +++N+P+NP+G +++ E + ++ L I +
Sbjct: 153 ADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPI 212
Query: 277 LVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL---- 332
+ +DE Y ++ + D I + + Y+ T+ S K+ SL G +IG+ + P +
Sbjct: 213 FIIADEPYREIVY--DGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKA 270
Query: 333 -----TWGVRQAHSFLT----FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEG 383
G +A ++ F AT + A Y + +L EG
Sbjct: 271 ELYAAVCGAGRALGYVCAPSLFQKXIVKCQGATGDINA-----------YKENRDLLYEG 319
Query: 384 LNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCE 417
L +G+ F G ++ V + AFCE
Sbjct: 320 LTRIGYHCFKPDGAFYXFVKAL---EDDSNAFCE 350
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 18/299 (6%)
Query: 139 KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVI 198
K Y G P F +++ + V PE+ + T+G T A + LI PGD VI
Sbjct: 56 KLNYGWIEGSPAFKKSVSQLYTG-----VKPEQ-ILQTNGATGANLLVLYSLIEPGDHVI 109
Query: 199 LFAPFYDSYEATLSMAGAKIKCITLRPPDFAIP-IEELKSTISKNTRAILMNTPHNPTGK 257
P Y GA++ + + +P +E+L+ I T+ I +N +NPTG
Sbjct: 110 SLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGA 169
Query: 258 MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS 317
+ R L + + E + SDEVY + E+D + S+ +Y++ + +NSL T+S
Sbjct: 170 VXDRTYLEELVEIASEVGAYILSDEVYRSFS-ELD---VPSIIEVYDKGIAVNSLSXTYS 225
Query: 318 LTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKK 377
L G +IGW A +T +R + A AL + E +
Sbjct: 226 LPGIRIGWVAANHQVTDILRDYRDYTXICAGVFDDLVAQLALAHYQEILERNRHILEENL 285
Query: 378 AIL---VEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
AIL +E V + T FV + + FC L++E GV+ +P + F
Sbjct: 286 AILDQWIEEEPLVSYIRPAVVSTSFVKIAVDXPXED----FCLQLLQEHGVLLVPGNRF 340
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 134/290 (46%), Gaps = 21/290 (7%)
Query: 135 IRDGKNQYARGH--GVPEFNS----AIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188
I++ Y R H G FN A+ +K+ V E ++ G AI+ +
Sbjct: 79 IKEAIINYGREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKE-DILFIDGVVPAISIALQ 137
Query: 189 GLINPGDEVILFAPFYDSYEATLSMAGAKI--KCITLRPPDFAIPIEEL-KSTISKNTRA 245
GD V++ +P Y + T+ + ++ + + F I E+L K I N +
Sbjct: 138 AFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKI 197
Query: 246 ILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA-FEMDHISIASLPGMYE 304
L+ +PHNP G+++ ++L IA LC ++ V++ SDE++ LA F H S+ +L Y+
Sbjct: 198 YLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYK 257
Query: 305 R-TVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS-----TPMQWAATAA 358
T+ ++S KTF++ G K +AI +R+ + A + T A AA
Sbjct: 258 DFTIILSSATKTFNIAGTKNSFAIIQNE---SLRRKFQYRQLANNQHEVPTVGMIATQAA 314
Query: 359 LRAPETYYEELKRDYSAKKAILVEGLNA-VGFKVFPSSGTYFVVVDHTPF 407
+ + + EELK ++++ L A KV GTY V +D + +
Sbjct: 315 FQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAY 364
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 131/306 (42%), Gaps = 20/306 (6%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFA 201
Y +G+PE +A+ KK LEV PE + +T G T A+ LI+PGD VI
Sbjct: 71 YTPANGIPELREELAAFLKKYDHLEVSPEN-IVITIGGTGALDLLGRVLIDPGDVVITEN 129
Query: 202 PFYDSYEATLSMAGAKIKCI-----TLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTG 256
P Y + GAKI+ + +R I+ELK+ K + T NP G
Sbjct: 130 PSYINTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMG 189
Query: 257 KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTF 316
+ E + + + D+L+ D Y+ + +E I R + +L K
Sbjct: 190 VTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVL 249
Query: 317 SLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRD---- 372
TG++IGW IA + V + F Q+ A L+ Y+E+ +
Sbjct: 250 G-TGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLK--RGYFEKYHLEGALL 306
Query: 373 -YSAKKAILVEGL-NAVGFKVF--PSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428
Y K+ I+++ L N + F P +G + V+ P G + I+F L++ GVV +
Sbjct: 307 GYKEKRDIMLKALENHLPNAEFTKPIAGMF--VMFFLPEGADG-ISFANELMEREGVVVV 363
Query: 429 PTSVFY 434
P FY
Sbjct: 364 PGKPFY 369
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 8/264 (3%)
Query: 151 FNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT 210
F A ++ G+ +DP +E G E +A +L L P D ++L Y SY
Sbjct: 68 FLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGA 127
Query: 211 LSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASL 270
+A + I LR A ++ + + + + +L+N P+NPTG + L
Sbjct: 128 ARVASLRTFLIPLREDGLA-DLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGL 186
Query: 271 CIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP 330
++ + + D Y +E + S +LPG ER V + SL K+++L G+++G+A+
Sbjct: 187 ARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE 246
Query: 331 HLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFK 390
+ + + F + AL+ P+ R Y + + E L V
Sbjct: 247 EALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV-LS 305
Query: 391 VFPSSGTYFVV------VDHTPFG 408
+ P T ++ VD FG
Sbjct: 306 LLPPRATMYLWGRLPEGVDDLEFG 329
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 127/318 (39%), Gaps = 17/318 (5%)
Query: 117 GFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVT 176
G P P +A +++ Y G+P IA + + G+++DP + V +T
Sbjct: 39 GQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGR-VVIT 97
Query: 177 SGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELK 236
G + L + GD V + AP Y SY L G + P + P+
Sbjct: 98 PGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADF 157
Query: 237 STISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISI 296
+ + + + + +P NPTG + SDE+Y + +E ++
Sbjct: 158 AGL--DLAGLXVASPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTA 215
Query: 297 ASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV-RQAHSFLTFATSTPMQWAA 355
L + +NS K FS TGW++GW + P V R A + A A+
Sbjct: 216 LEL---TDECYVINSFSKYFSXTGWRVGWXVVPEDQVRVVERIAQNXFICAPH-----AS 267
Query: 356 TAALRAPETYYEELKRD---YSAKKAILVEGLNAVGF-KVFPSSGTYFVVVDHTPFGHET 411
A A EL+ + Y A + + +E L GF ++ P G ++V D + ++
Sbjct: 268 QVAALAALDCDAELQANLDVYKANRKLXLERLPKAGFTRIAPPDGAFYVYADVSDLTDDS 327
Query: 412 DIAFCEYLIKEVGVVAIP 429
AF ++++ GV P
Sbjct: 328 R-AFAAEILEKAGVAVTP 344
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 140/330 (42%), Gaps = 17/330 (5%)
Query: 111 AINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKD-SGLEVDP 169
A+ L G P P + DA ++ + +Y G+PE A A+ K+ GL VD
Sbjct: 32 AVPLHIGEPKHPTPKVITDALTASLHE-LEKYPLTAGLPELRQACANWLKRRYDGLTVDA 90
Query: 170 EKEVTVTSGCTEAIAATILGLINPGDEVILFA-----PFYDSYEATLSMAGAKIKCITLR 224
+ E+ G EA+ + + ++NP + I A PFY YE + G +I
Sbjct: 91 DNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCP 150
Query: 225 PPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
P F + + K T+ + + +P+NP+G + + + L + ++ SDE Y
Sbjct: 151 APSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECY 210
Query: 285 DKLAFEMDH-----ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA 339
++ F+ + + A L ++ + SL ++ G + G+ L
Sbjct: 211 SEIYFDGNKPLGCLQAAAQLGRSRQKLLXFTSLSXRSNVPGLRSGFVAGDAELLKNFLLY 270
Query: 340 HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYF 399
++ A S P+Q A+ AA E + + +R Y K ++ L V F V +++
Sbjct: 271 RTYHGSAXSIPVQRASIAAWDD-EQHVIDNRRLYQEKFERVIPILQQV-FDVKLPDASFY 328
Query: 400 VVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429
+ + P G D+AF L ++ + +P
Sbjct: 329 IWL-KVPDG--DDLAFARNLWQKAAIQVLP 355
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 18/264 (6%)
Query: 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITL--RPPDFAIPIE 233
SG AI+A + +PGD++++ P Y+ + + + G ++ L +++
Sbjct: 91 ASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVIEGNGRRVISSDLIYENSKYSVNWA 150
Query: 234 ELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD 292
+L+ ++ + R + PHNP G ++ EE+ IA LC ++ VL+ SDE++ L +
Sbjct: 151 DLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDE 210
Query: 293 HISIASLPGMYERT--VTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLTFATST 349
I+ A + V++ S TF+L AI P P L R SF
Sbjct: 211 DITPAFTVDWDAKNWVVSLISPSXTFNLAALHAACAIIPNPDLR--ARAEESFFLAGIGE 268
Query: 350 PMQWAATAALRAPET---YYEELKR----DYSAKKAILVEGLNAVGFKVFPSSGTYFVVV 402
P A AA+ A E + ELK+ +++ + L + + V KV S+ +Y V
Sbjct: 269 PNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEV--KVLDSNASYLAWV 326
Query: 403 DHTPFGHETDIAFCEYLIKEVGVV 426
D + G + FC+YL ++ G++
Sbjct: 327 DISALGXNAE-DFCKYLREKTGLI 349
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 131/315 (41%), Gaps = 31/315 (9%)
Query: 146 HGVPEFNSAIASRFKKDSGLEV--DPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPF 203
HG+PEF AIA +K G V DPE+ V + G T A I L +PGD ++ +P+
Sbjct: 83 HGLPEFRKAIAKFMEKTRGGRVRFDPER-VVMAGGATGANETIIFCLADPGDAFLVPSPY 141
Query: 204 YDSYEATLS-MAGAKIKCITLRPPD-FAIPIEELKSTISK------NTRAILMNTPHNPT 255
Y ++ L G ++ I + F I + +K + +++ P NP
Sbjct: 142 YPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPL 201
Query: 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASLPGMYERTVT------ 308
G ++ L + S ++++ + DE+Y F+ +SIA + E T
Sbjct: 202 GTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVH 261
Query: 309 -MNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYY 366
+ SL K L G+++G + + R+ SF +T T AA+ + E +
Sbjct: 262 IVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQY---FLAAMLSDEKFV 318
Query: 367 EELKRD----YSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHE----TDIAFCEY 418
+ R+ + GL VG K ++ F +D P E ++++
Sbjct: 319 DNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRV 378
Query: 419 LIKEVGVVAIPTSVF 433
+I +V + P S F
Sbjct: 379 IINDVKLNVSPGSSF 393
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 16/236 (6%)
Query: 112 INLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGH----GVPEFNSAIASRFK-----K 161
I L G P D A I+ +++ +Q G+ G PE A+A+ ++ K
Sbjct: 36 IKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHK 95
Query: 162 DSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCI 221
+ + V + SG + I I + + GD ++ P + YE G +
Sbjct: 96 EELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFY 155
Query: 222 TLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280
RP D+ ++E++ T+ +++ P NP G F+R+ + I L E + +FS
Sbjct: 156 NCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFS 215
Query: 281 DEVYDKLAFE-MDHISIASLPGMYERTVTMNSLGKT---FSLTGWKIGWAI-APPH 331
DE+Y + F+ D + + +E TV LG T + GW++GW + PH
Sbjct: 216 DEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPH 271
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 126/267 (47%), Gaps = 11/267 (4%)
Query: 151 FNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT 210
+N +I + + ++ E + + G AI+ I L D++++ P Y + +
Sbjct: 72 YNESIVNWLYRRHNWKIKSE-WLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSV 130
Query: 211 LSMAGAKI---KCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267
+ ++ L ++ + E++++ I K+ + ++ PHNP G+++T++EL +
Sbjct: 131 VKNNNRELIISPLQKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKL 189
Query: 268 ASLCIENDVLVFSDEVY-DKLAFEMDHISIASLPGMYER-TVTMNSLGKTFSLTGWKIGW 325
+C++++V + SDE++ D + + HI +AS+ +E+ T+T + KTF++ G + +
Sbjct: 190 GDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSY 249
Query: 326 AIAPPHLTWG-VRQAHSFLTFATSTPMQWAAT-AALRAPETYYEELKR--DYSAKKAILV 381
+ P + + A + + + AT A+ E++ E + + AI
Sbjct: 250 VVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKY 309
Query: 382 EGLNAVGFKVFPSSGTYFVVVDHTPFG 408
N KV GTY + VD + G
Sbjct: 310 INENMPKLKVRKPEGTYLLWVDFSALG 336
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 80/150 (53%), Gaps = 5/150 (3%)
Query: 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPD--FAIPIE 233
T+G A+ + PGD VI+ P Y + + KI L D + I +
Sbjct: 95 TAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQ 154
Query: 234 EL-KSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEV-YDKLAFEM 291
+L K + KN +A+L +PHNP G+++ ++EL I + +++D++++SDE+ +D +
Sbjct: 155 KLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGY 214
Query: 292 DHISIASL-PGMYERTVTMNSLGKTFSLTG 320
+H S+ + ++T+T + KTF++ G
Sbjct: 215 EHTVFQSIDEQLADKTITFTAPSKTFNIAG 244
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 92/183 (50%), Gaps = 8/183 (4%)
Query: 168 DPEKE-VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP 226
D +KE + ++G A++ +I + V++ P Y + ++ ++ L+
Sbjct: 79 DIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNNRQLCVSPLQKQ 138
Query: 227 D--FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
+ +AI E L+ + + L+ +PHNP G+++ +EEL + SLC + +V+V +DE++
Sbjct: 139 NDTYAIDFEHLEKQFQQGVKLXLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIH 198
Query: 285 DKLAF-EMDHISIASL-PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSF 342
+ + + H ASL + RT+T + TF++ G + I P +RQA +
Sbjct: 199 SDIIYADHTHTPFASLSEELAARTITCXAPSXTFNIAGLQASIIIIPNE---KLRQAFTS 255
Query: 343 LTF 345
+ +
Sbjct: 256 IQY 258
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 117/282 (41%), Gaps = 27/282 (9%)
Query: 146 HGVPEFNSAIASRFKKDSGLEV--DPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPF 203
HG+P F A+ + G +V DP + +T+G T A I L +PG+ V++ P+
Sbjct: 86 HGLPAFKKAMVDFMAEIRGNKVTFDP-NHLVLTAGATSANETFIFCLADPGEAVLIPTPY 144
Query: 204 YDSYEATLSM-AGAKIKCITLRPPD-FAI---PIEELKSTISKNT---RAILMNTPHNPT 255
Y ++ L G +I I + F I +EE K + +L+ P NP
Sbjct: 145 YPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPL 204
Query: 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASL---------PGMYER 305
G TR EL ++ S + + + SDE+Y AF IS+ + +++R
Sbjct: 205 GTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQR 264
Query: 306 TVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA-TSTPMQWAATAAL---RA 361
+ SL K L G+++G + + V A +F S+ Q +A L +
Sbjct: 265 VHVVYSLSKDLGLPGFRVGAIYSNDDMV--VAAATKMSSFGLVSSQTQHLLSAMLSDKKL 322
Query: 362 PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVD 403
+ Y E + ++ LV GL G + F VD
Sbjct: 323 TKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVD 364
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 117/282 (41%), Gaps = 27/282 (9%)
Query: 146 HGVPEFNSAIASRFKKDSGLEV--DPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPF 203
HG+P F A+ + G +V DP + +T+G T A I L +PG+ V++ P+
Sbjct: 86 HGLPAFKKAMVDFMAEIRGNKVTFDP-NHLVLTAGATSANETFIFCLADPGEAVLIPTPY 144
Query: 204 YDSYEATLSM-AGAKIKCITLRPPD-FAI---PIEELKSTISKNT---RAILMNTPHNPT 255
Y ++ L G +I I + F I +EE K + +L+ P NP
Sbjct: 145 YPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPL 204
Query: 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASL---------PGMYER 305
G TR EL ++ S + + + SDE+Y AF IS+ + +++R
Sbjct: 205 GTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQR 264
Query: 306 TVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA-TSTPMQWAATAAL---RA 361
+ SL K L G+++G + + V A +F S+ Q +A L +
Sbjct: 265 VHVVYSLSKDLGLPGFRVGAIYSNDDMV--VAAATKMSSFGLVSSQTQHLLSAMLSDKKL 322
Query: 362 PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVD 403
+ Y E + ++ LV GL G + F VD
Sbjct: 323 TKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVD 364
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 117/282 (41%), Gaps = 27/282 (9%)
Query: 146 HGVPEFNSAIASRFKKDSGLEV--DPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPF 203
HG+P F A+ + G +V DP + +T+G T A I L +PG+ V++ P+
Sbjct: 84 HGLPAFKKAMVDFMAEIRGNKVTFDP-NHLVLTAGATSANETFIFCLADPGEAVLIPTPY 142
Query: 204 YDSYEATLSM-AGAKIKCITLRPPD-FAI---PIEELKSTISKNT---RAILMNTPHNPT 255
Y ++ L G +I I + F I +EE K + +L+ P NP
Sbjct: 143 YPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPL 202
Query: 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASL---------PGMYER 305
G TR EL ++ S + + + SDE+Y AF IS+ + +++R
Sbjct: 203 GTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQR 262
Query: 306 TVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA-TSTPMQWAATAAL---RA 361
+ SL K L G+++G + + V A +F S+ Q +A L +
Sbjct: 263 VHVVYSLSKDLGLPGFRVGAIYSNDDMV--VAAATKMSSFGLVSSQTQHLLSAMLSDKKL 320
Query: 362 PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVD 403
+ Y E + ++ LV GL G + F VD
Sbjct: 321 TKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVD 362
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 122/299 (40%), Gaps = 24/299 (8%)
Query: 144 RGHGVPEFN-SAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAP 202
RG+G P+F A+ + +D KE+ ++ G + +L P V + P
Sbjct: 69 RGYG-PDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLF-RLLSFFGPNQTVAIQDP 126
Query: 203 FYDSYEATLSMAGAK--IKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFT 260
Y +Y + GAK I L+ F E + + + +P+NPTG +
Sbjct: 127 SYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE-----DTHIDILCLCSPNNPTGTVLN 181
Query: 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLT 319
+++L I IE+++L+ D Y + SI +P + +NS K
Sbjct: 182 KDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFA 241
Query: 320 GWKIGWAIAPPHLTWG-----VRQAHSFL--TF-ATSTPMQWAATAALR-APETYYEELK 370
G ++GW + P LT+ ++ FL TF S P Q A A L P+ E
Sbjct: 242 GIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQL---EAI 298
Query: 371 RDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429
Y +L + L A GF+VF ++ V T + +D ++ ++E + P
Sbjct: 299 HYYRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQ-ANISDRDLFDFFLREYHIAITP 356
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 17/261 (6%)
Query: 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEV 167
K ++LG G P F+ P F++DA ++ N Y + +A FK+ +E+
Sbjct: 22 KKRGLDLGIGEPQFETPKFIQDA-LKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIEL 80
Query: 168 DPEKEVTVTSGCTEAI----AATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITL 223
E E+ T G E + + + NP + PFY YE AK L
Sbjct: 81 K-ENELISTLGSREVLFNFPSFVLFDYQNPT--IAYPNPFYQIYEGAAKFIKAKSLLXPL 137
Query: 224 -RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDE 282
+ DF + E + + +++N+P+NPTG+ + EEL L +++D ++ +DE
Sbjct: 138 TKENDFTPSLNEKEL---QEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDE 194
Query: 283 VYDKLAFEMDHISIAS---LPG--MYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVR 337
Y ++ S+ L G ++ + ++SL K S G + G+ L +
Sbjct: 195 CYSEIYENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYK 254
Query: 338 QAHSFLTFATSTPMQWAATAA 358
++L + ++ +Q A+ AA
Sbjct: 255 AFRAYLGYTSANAIQKASEAA 275
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 117/276 (42%), Gaps = 21/276 (7%)
Query: 146 HGVPEFNSAIASRFKKDSGLEV--DPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPF 203
HG+P F A+ + G +V DP + +T+G T A I L +PG+ V++ P+
Sbjct: 69 HGLPAFKKAMVDFMAEIRGNKVTFDP-NHLVLTAGATSANETFIFCLADPGEAVLIPTPY 127
Query: 204 YDSYEATLSM-AGAKIKCITLRPPD-FAI---PIEELKSTISKNT---RAILMNTPHNPT 255
Y ++ L G +I I + F I +EE K + +L+ P NP
Sbjct: 128 YPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPL 187
Query: 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASL--PGMYERTVTMNSL 312
G TR EL ++ S + + + SDE+Y AF IS+ + +++R + SL
Sbjct: 188 GTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDEVWQRVHVVYSL 247
Query: 313 G-KTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA-TSTPMQWAATAAL---RAPETYYE 367
K L G+++G + + V A +F S+ Q +A L + + Y
Sbjct: 248 SXKDLGLPGFRVGAIYSNDDMV--VAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIA 305
Query: 368 ELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVD 403
E + ++ LV GL G + F VD
Sbjct: 306 ENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVD 341
>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
pdb|3HDO|B Chain B, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 15/227 (6%)
Query: 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPI 232
+ +G E + I G+E+ P Y Y + GA+++ L DF I
Sbjct: 85 IIXANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG-DFRI-- 141
Query: 233 EELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD 292
+ + TP+ P G F E ++ +A C VL DE Y + A E +
Sbjct: 142 --AGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGXLVL---DETYAEFA-ESN 195
Query: 293 HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQ 352
+ + +E V +L K++SL G +IG AIA P + + + + Q
Sbjct: 196 ALELVR---RHENVVVTRTLSKSYSLAGXRIGLAIARPEVIAALDKIRDH--YNLDRLAQ 250
Query: 353 WAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYF 399
A AALR + Y E R + L ++G+ V PS G Y
Sbjct: 251 AACVAALRD-QAYLSECCRRIRETREWFTTELRSIGYDVIPSQGNYL 296
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 90/229 (39%), Gaps = 21/229 (9%)
Query: 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPI 232
V+V +G E I +L D + F P Y Y GAK + L D IP
Sbjct: 79 VSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPL-TKDLRIP- 132
Query: 233 EELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD 292
+ + + + + P+NPTG +F REE+ I ++ V DE Y +E
Sbjct: 133 ---EVNVGEGD-VVFIPNPNNPTGHVFEREEIERI----LKTGAFVALDEAY----YEFH 180
Query: 293 HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQ 352
S YE + + K FSL ++G+ +A + L F S Q
Sbjct: 181 GESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVR--LPFNVSYVSQ 238
Query: 353 WAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVV 401
A AL E +EE + ++ + L +G+++ S G + V
Sbjct: 239 MFAKVALDHREI-FEERTKFIVEERERMKSALREMGYRITDSRGNFVFV 286
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 90/229 (39%), Gaps = 21/229 (9%)
Query: 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPI 232
V+V +G E I +L D + F P Y Y GAK + L D IP
Sbjct: 91 VSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPL-TKDLRIP- 144
Query: 233 EELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD 292
+ + + + + P+NPTG +F REE+ I ++ V DE Y +E
Sbjct: 145 ---EVNVGEGD-VVFIPNPNNPTGHVFEREEIERI----LKTGAFVALDEAY----YEFH 192
Query: 293 HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQ 352
S YE + + K FSL ++G+ +A + L F S Q
Sbjct: 193 GESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVR--LPFNVSYVSQ 250
Query: 353 WAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVV 401
A AL E +EE + ++ + L +G+++ S G + V
Sbjct: 251 MFAKVALDHREI-FEERTKFIVEERERMKSALREMGYRITDSRGNFVFV 298
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 134/327 (40%), Gaps = 60/327 (18%)
Query: 144 RGHGVPEFNS----AIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVIL 199
RG+G+ + N AIA F +D L V EV V+ G I+ L L+ + +
Sbjct: 106 RGYGLEQGNKTLRKAIAETFYRD--LHVK-SNEVFVSDGAQSDISRLQL-LLGSNVTIAV 161
Query: 200 FAPFYDSYEATLSMAG---------AKIKCITLRP--------PDFAIPIEELKSTISKN 242
P + +Y + + G K + + P PD A+ +
Sbjct: 162 QDPTFPAYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDLAM---------TPR 212
Query: 243 TRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM 302
T I +P+NPTG + +R++L+ + N ++ D Y + SI +PG
Sbjct: 213 TDVIFFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGA 272
Query: 303 YERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG-----VRQAHSFLT--FATSTPMQWAA 355
E + ++S K TG ++GW+I P L + + H +T F ++ + A
Sbjct: 273 REVAIEVSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAG 332
Query: 356 TAA---------LRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTP 406
A +R+ YY+E + IL++ L ++G KV+ ++ V
Sbjct: 333 GLACLSSGGLKEIRSVNNYYKE-------NRKILMDTLVSLGLKVYGGVNAPYLWVHFK- 384
Query: 407 FGHETDIAFCEYLIKEVGVVAIPTSVF 433
G ++ F E +++ ++ +P S F
Sbjct: 385 -GSKSWDVFNE-ILENTHIITVPGSGF 409
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 133/345 (38%), Gaps = 35/345 (10%)
Query: 112 INLGQGFPNFDG--PDFVKDAAIQAIR---DGKNQYARGHGVPEFNSAIASRFKKDSGLE 166
I+L G PN + ++D ++ + D QY G + K G+
Sbjct: 34 ISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS 93
Query: 167 VDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFY-------DSYEAT-----LSMA 214
D ++ +TSG +A+ +NPGD V++ AP Y + YE L
Sbjct: 94 QD--NDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE 151
Query: 215 GAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN 274
G K++ + + ++ELKS K + T NP G + + L E
Sbjct: 152 GMKVEILEEK-------LKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEY 204
Query: 275 DVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334
D +V D+ Y +L + + R + + + K + G++IGW + P +
Sbjct: 205 DFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIR 263
Query: 335 GVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAV---GF 389
+ A T+ Q A + E + E+++ Y ++ ++E L G
Sbjct: 264 KMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGV 323
Query: 390 KVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434
K G F+ V P G ++ E IK+ GV +P FY
Sbjct: 324 KWTKPEGGMFIWV-TLPDGIDSK-KMLERAIKK-GVAYVPGEAFY 365
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 133/345 (38%), Gaps = 35/345 (10%)
Query: 112 INLGQGFPNFDG--PDFVKDAAIQAIR---DGKNQYARGHGVPEFNSAIASRFKKDSGLE 166
I+L G PN + ++D ++ + D QY G + K G+
Sbjct: 79 ISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS 138
Query: 167 VDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFY-------DSYEAT-----LSMA 214
D ++ +TSG +A+ +NPGD V++ AP Y + YE L
Sbjct: 139 QD--NDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE 196
Query: 215 GAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN 274
G K++ + + ++ELKS K + T NP G + + L E
Sbjct: 197 GMKVEILEEK-------LKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEY 249
Query: 275 DVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334
D +V D+ Y +L + + R + + + K + G++IGW + P +
Sbjct: 250 DFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIR 308
Query: 335 GVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAV---GF 389
+ A T+ Q A + E + E+++ Y ++ ++E L G
Sbjct: 309 KMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGV 368
Query: 390 KVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434
K G F+ V P G ++ E IK+ GV +P FY
Sbjct: 369 KWTKPEGGMFIWV-TLPDGIDSK-KMLERAIKK-GVAYVPGEAFY 410
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 99/253 (39%), Gaps = 38/253 (15%)
Query: 112 INLGQGFPNFDGPD-FVKDAAIQAIRDGKN------------QYARGHGVPEFNSAIAS- 157
I+L G PN P+ F A+ + +GK QY+ G+PE S +
Sbjct: 34 ISLAGGLPN---PNMFPFKTAVITVENGKTIQFGEEMMKRALQYSPSAGIPELLSWLKQL 90
Query: 158 --RFKKDSGLEVDPEK---EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS 212
+ + P + ++ VTSG + + +INPGD V+L P Y +L
Sbjct: 91 QIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH 150
Query: 213 MAGAKIKCITLRPPDFAIPIEELKSTIS-----------KNTRAILMNTP--HNPTGKMF 259
G I I + + I + L+ +S KNT L P +NPTG
Sbjct: 151 PLGCNI--INVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSL 208
Query: 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319
T E I L + D L+ D+ Y L F + + R + +S K S +
Sbjct: 209 TSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKIIS-S 267
Query: 320 GWKIGWAIAPPHL 332
G +IG+ P L
Sbjct: 268 GLRIGFLTGPKPL 280
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 99/253 (39%), Gaps = 38/253 (15%)
Query: 112 INLGQGFPNFDGPD-FVKDAAIQAIRDGKN------------QYARGHGVPEFNSAIAS- 157
I+L G PN P+ F A+ + +GK QY+ G+PE S +
Sbjct: 34 ISLAGGLPN---PNMFPFKTAVITVENGKTIQFGEEMMKRALQYSPSAGIPELLSWLKQL 90
Query: 158 --RFKKDSGLEVDPEK---EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS 212
+ + P + ++ VTSG + + +INPGD V+L P Y +L
Sbjct: 91 QIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXKVFEMIINPGDNVLLDEPAYSGTLQSLH 150
Query: 213 MAGAKIKCITLRPPDFAIPIEELKSTIS-----------KNTRAILMNTP--HNPTGKMF 259
G I I + + I + L+ +S KNT L P +NPTG
Sbjct: 151 PLGCNI--INVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSL 208
Query: 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319
T E I L + D L+ D+ Y L F + + R + +S K S +
Sbjct: 209 TSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKIIS-S 267
Query: 320 GWKIGWAIAPPHL 332
G +IG+ P L
Sbjct: 268 GLRIGFLTGPKPL 280
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 85/225 (37%), Gaps = 21/225 (9%)
Query: 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPI 232
V+V +G E I L D + F P Y Y GAK + L D IP
Sbjct: 79 VSVGNGADEIIYVXXLXF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPL-TKDLRIP- 132
Query: 233 EELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD 292
+ + + + + P+NPTG +F REE+ I ++ V DE Y +E
Sbjct: 133 ---EVNVGEGD-VVFIPNPNNPTGHVFEREEIERI----LKTGAFVALDEAY----YEFH 180
Query: 293 HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQ 352
S YE + + K FSL ++G+ +A + L F S Q
Sbjct: 181 GESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVR--LPFNVSYVSQ 238
Query: 353 WAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGT 397
A AL E +EE + ++ L G+++ S G
Sbjct: 239 XFAKVALDHREI-FEERTKFIVEERERXKSALREXGYRITDSRGN 282
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 99/253 (39%), Gaps = 38/253 (15%)
Query: 112 INLGQGFPNFDGPD-FVKDAAIQAIRDGKN------------QYARGHGVPEFNSAIAS- 157
I+L G PN P+ F A+ + +GK QY+ G+PE S +
Sbjct: 34 ISLAGGLPN---PNMFPFKTAVITVENGKTIQFGEEMMKRALQYSPSAGIPELLSWLKQL 90
Query: 158 --RFKKDSGLEVDPEK---EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS 212
+ + P + ++ VTSG + + +INPGD V+L P Y +L
Sbjct: 91 QIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH 150
Query: 213 MAGAKIKCITLRPPDFAIPIEELKSTIS-----------KNTRAILMNTP--HNPTGKMF 259
G I I + + I + L+ +S KNT L P +NPTG
Sbjct: 151 PLGCNI--INVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSL 208
Query: 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319
T E I L + D L+ D+ Y L F + + R + +S K S +
Sbjct: 209 TSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-S 267
Query: 320 GWKIGWAIAPPHL 332
G +IG+ P L
Sbjct: 268 GLRIGFLTGPKPL 280
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 12/194 (6%)
Query: 237 STISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISI 296
ST+ + T I +P+NPTG TRE+L + +N ++ D Y + + SI
Sbjct: 194 STVGR-TDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSI 252
Query: 297 ASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW--GVRQAHSF-----LTFATST 349
+PG E S K TG ++GW + P L + G A F F ++
Sbjct: 253 FEIPGAEEVAXETASFSKYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGAS 312
Query: 350 PMQWAATAALRAPETYYEELK--RDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF 407
+ A A PE K Y I+++ ++G+ V+ +V V H P
Sbjct: 313 NISQAGALACLTPEGLEAXHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWV-HFPN 371
Query: 408 GHETDIAFCEYLIK 421
D+ F E L K
Sbjct: 372 QSSWDV-FAEILEK 384
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 99/253 (39%), Gaps = 38/253 (15%)
Query: 112 INLGQGFPNFDGPD-FVKDAAIQAIRDGKN------------QYARGHGVPEFNSAIAS- 157
I+L G PN P+ F A+ + +GK QY+ G+PE S +
Sbjct: 34 ISLAGGLPN---PNMFPFKTAVITVENGKTIQFGEEMMKRALQYSPSAGIPELLSWLKQL 90
Query: 158 --RFKKDSGLEVDPEK---EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS 212
+ + P + ++ VTSG + + +INPGD V+L P Y +L
Sbjct: 91 QIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH 150
Query: 213 MAGAKIKCITLRPPDFAIPIEELKSTIS-----------KNTRAILMNTP--HNPTGKMF 259
G I I + + I + L+ +S KNT L P +NPTG
Sbjct: 151 PLGCNI--INVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSL 208
Query: 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319
T E I L + D L+ D+ Y L F + + R + +S K S +
Sbjct: 209 TSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-S 267
Query: 320 GWKIGWAIAPPHL 332
G +IG+ P L
Sbjct: 268 GLRIGFLTGPKPL 280
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 12/194 (6%)
Query: 237 STISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISI 296
ST+ + T I +P+NPTG TRE+L + +N ++ D Y + + SI
Sbjct: 194 STVGR-TDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSI 252
Query: 297 ASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW--GVRQAHSF-----LTFATST 349
+PG E + S K TG ++GW + P L + G A F F ++
Sbjct: 253 FEIPGAEEVAMETASFSKYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGAS 312
Query: 350 PMQWAATAALRAPETY--YEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF 407
+ A A PE ++ Y I+++ ++G+ V+ +V V H P
Sbjct: 313 NISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWV-HFPN 371
Query: 408 GHETDIAFCEYLIK 421
D+ F E L K
Sbjct: 372 QSSWDV-FAEILEK 384
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 99/253 (39%), Gaps = 38/253 (15%)
Query: 112 INLGQGFPNFDGPD-FVKDAAIQAIRDGKN------------QYARGHGVPEFNSAIAS- 157
I+L G PN P+ F A+ + +GK QY+ G+PE S +
Sbjct: 34 ISLAGGLPN---PNMFPFKTAVITVENGKTIQFGEEMMKRALQYSPSAGIPELLSWLKQL 90
Query: 158 --RFKKDSGLEVDPEK---EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS 212
+ + P + ++ VTSG + + +INPGD V+L P Y +L
Sbjct: 91 QIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH 150
Query: 213 MAGAKIKCITLRPPDFAIPIEELKSTIS-----------KNTRAILMNTP--HNPTGKMF 259
G I I + + I + L+ +S KNT L P +NPTG
Sbjct: 151 PLGCNI--INVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSL 208
Query: 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319
T E I L + D L+ D+ Y L F + + R + +S K S +
Sbjct: 209 TSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-S 267
Query: 320 GWKIGWAIAPPHL 332
G +IG+ P L
Sbjct: 268 GLRIGFLTGPKPL 280
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 12/194 (6%)
Query: 237 STISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISI 296
ST+ + T I +P+NPTG TRE+L + +N ++ D Y + + SI
Sbjct: 194 STVGR-TDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSI 252
Query: 297 ASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW--GVRQAHSF-----LTFATST 349
+PG E + S + TG ++GW + P L + G A F F ++
Sbjct: 253 FEIPGAEEVAMETASFSQYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGAS 312
Query: 350 PMQWAATAALRAPETY--YEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF 407
+ A A PE ++ Y I+++ ++G+ V+ +V V H P
Sbjct: 313 NISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWV-HFPN 371
Query: 408 GHETDIAFCEYLIK 421
D+ F E L K
Sbjct: 372 QSSWDV-FAEILEK 384
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 116/294 (39%), Gaps = 23/294 (7%)
Query: 155 IASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM- 213
+A R +G VD + +T G A+ + + GD+V + P Y + +
Sbjct: 87 LAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFF 146
Query: 214 ----AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269
++ ++ + + L+ R L + P+NP G +++ EE+ IA+
Sbjct: 147 EGEXVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAA 206
Query: 270 LCIENDVLVFSDEVYDKLAF---EMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWA 326
L V +D++Y +L + H+ A E VT+ T SL+G+++G A
Sbjct: 207 LAARYGATVIADQLYSRLRYAGASYTHLR-AEAAVDAENVVTIXGPSXTESLSGYRLGVA 265
Query: 327 IAPPHLTWGVRQAHSFLTFATSTPMQWAATAALR-----APETYYEELKRDYSAKKAIL- 380
+ + + ++ + Q A LR AP + + R + + +L
Sbjct: 266 FGSRAIIARXEKLQAIVSLRAAGYSQ----AVLRGWFDEAPGWXEDRIARHQAIRDELLH 321
Query: 381 -VEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433
+ G V F P +G+Y + P F + L + GVV P + F
Sbjct: 322 VLRGXEGV-FARTPQAGSY--LFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEF 372
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 127 VKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186
+ +A Q + G Y+R EF +AIA F +D + V ++
Sbjct: 46 IIEALNQRLMHGVFGYSRWKN-DEFLAAIAHWFSTQHYTAIDSQT-VVYGPSVIYMVSEL 103
Query: 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITL--RPPDFAIPIEELKSTISK-NT 243
I G+ V++ P YD++ + + + L + + + +L++ ++K
Sbjct: 104 IRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPEC 163
Query: 244 RAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY-DKLAFEMDHI 294
+ +L+ +P NPTGK++T +EL ++A LC + V V SDE++ D + E HI
Sbjct: 164 KIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHI 215
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 12/194 (6%)
Query: 237 STISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISI 296
ST+ + T I +P+NPTG TRE+L + +N ++ D Y + + SI
Sbjct: 194 STVGR-TDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSI 252
Query: 297 ASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW--GVRQAHSF-----LTFATST 349
+PG E + S TG ++GW + P L + G A F F ++
Sbjct: 253 FEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGAS 312
Query: 350 PMQWAATAALRAPETY--YEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF 407
+ A A PE ++ Y I+++ ++G+ V+ +V V H P
Sbjct: 313 NISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWV-HFPN 371
Query: 408 GHETDIAFCEYLIK 421
D+ F E L K
Sbjct: 372 QSSWDV-FAEILEK 384
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 98/253 (38%), Gaps = 38/253 (15%)
Query: 112 INLGQGFPNFDGPD-FVKDAAIQAIRDGKN------------QYARGHGVPEFNSAIAS- 157
I+L G PN P+ F A+ + +GK QY+ G+PE S +
Sbjct: 34 ISLAGGLPN---PNMFPFKTAVITVENGKTIQFGEEMMKRALQYSPSAGIPELLSWLKQL 90
Query: 158 --RFKKDSGLEVDPEK---EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS 212
+ + P + ++ VTSG + + +INPGD V+L P Y +L
Sbjct: 91 QIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH 150
Query: 213 MAGAKIKCITLRPPDFAIPIEELKSTIS-----------KNTRAILMNTP--HNPTGKMF 259
G I I + + I + L+ +S KNT L P +NPTG
Sbjct: 151 PLGCNI--INVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSL 208
Query: 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319
T E I L + D L+ D+ Y L F + + R + +S S +
Sbjct: 209 TSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXIIS-S 267
Query: 320 GWKIGWAIAPPHL 332
G +IG+ P L
Sbjct: 268 GLRIGFLTGPKPL 280
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 98/253 (38%), Gaps = 38/253 (15%)
Query: 112 INLGQGFPNFDGPD-FVKDAAIQAIRDGKN------------QYARGHGVPEFNSAIAS- 157
I+L G PN P+ F A+ + +GK QY+ G+PE S +
Sbjct: 36 ISLAGGLPN---PNMFPFKTAVITVENGKTIQFGEEMMKRALQYSPSAGIPELLSWLKQL 92
Query: 158 --RFKKDSGLEVDPEK---EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS 212
+ + P + ++ VTSG + + +INPGD V+L P Y +L
Sbjct: 93 QIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH 152
Query: 213 MAGAKIKCITLRPPDFAIPIEELKSTIS-----------KNTRAILMNTP--HNPTGKMF 259
G I I + + I + L+ +S KNT L P +NPTG
Sbjct: 153 PLGCNI--INVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSL 210
Query: 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319
T E I L + D L+ D+ Y L F + + R + +S S +
Sbjct: 211 TSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXIIS-S 269
Query: 320 GWKIGWAIAPPHL 332
G +IG+ P L
Sbjct: 270 GLRIGFLTGPKPL 282
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 152/369 (41%), Gaps = 55/369 (14%)
Query: 118 FPNF-DGPDFVKDAAIQAIR-------DGKNQYARGHGVPEFNSAIASRF-KKDSGLEVD 168
+PN D P F +DA +A R + Y+ GV +A+ ++D G+ D
Sbjct: 93 YPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPAD 152
Query: 169 PEKEVTVTSGCTEAIAATILGLINPGDE----VILFAPFYDSYEATLSMAGA-KIKCITL 223
P+ + +T+G ++ I+ + L++ G + V++ P Y Y A +S A ++
Sbjct: 153 PDN-IYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLD 211
Query: 224 RPPDFAIPIEELKSTISK-----NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLV 278
+A+ + EL+ + + + + + + P NPTG++ +R+ + + E + +
Sbjct: 212 EENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFL 271
Query: 279 FSDEVYDKLAFEMD---HISIASLPGM---YERTVTMNSLGKT----FSLTGWKIGWAIA 328
+DEVY + D H L M Y V + S T G++ G+ +
Sbjct: 272 LADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGY-ME 330
Query: 329 PPHLTWGVR-QAHSFLTFATSTPM--QWAATAALRAP---ETYYEELKRDYS------AK 376
+L ++ Q L+ P+ Q A + P E +E+ R+ AK
Sbjct: 331 VINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAK 390
Query: 377 KAILVEGL-NAV-GFKVFPSSGTYFVV--------VDHTPFGHET--DIAFCEYLIKEVG 424
KA L E L N V G P G + H+ D+ +C L++E G
Sbjct: 391 KAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETG 450
Query: 425 VVAIPTSVF 433
+ +P S F
Sbjct: 451 ICVVPGSGF 459
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 154 AIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFA-PFYDSYEATLS 212
A+ + + +G V PE +V V+ G E I I PG + IL+ P Y Y +
Sbjct: 62 AVIENYAQYAG--VKPE-QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAE 118
Query: 213 MAGAKIKCITLRPPD-FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLC 271
G ++C T+ D + + ++ + + + + + +P+NPTG++ ++ + L
Sbjct: 119 TIG--VECRTVPTLDNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLEL- 174
Query: 272 IENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 328
+V +DE Y + S+A Y + +L K F+L G + G+ +A
Sbjct: 175 TRGKAIVVADEAYIEFC---PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA 228
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 154 AIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFA-PFYDSYEATLS 212
A+ + + +G V PE +V V+ G E I I PG + IL+ P Y Y +
Sbjct: 62 AVIENYAQYAG--VKPE-QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAE 118
Query: 213 MAGAKIKCITLRPPD-FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLC 271
G ++C T+ D + + ++ + + + + + +P+NPTG++ ++ + L
Sbjct: 119 TIG--VECRTVPTLDNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLEL- 174
Query: 272 IENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 328
+V +DE Y + S+A Y + +L K F+L G + G+ +A
Sbjct: 175 TRGKAIVVADEAYIEFC---PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA 228
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 81/210 (38%), Gaps = 19/210 (9%)
Query: 136 RDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGD 195
R+G + Y G A+AS F +G D E+ ++ G IA I +
Sbjct: 101 REGYSGYGAEQGQGALREAVASTFYGHAGRAAD---EIFISDGSKCDIA-RIQMMFGSKP 156
Query: 196 EVILFAPFYDSYEATLSMAGA----------KIKCITLRPPDFAIPIEELKSTISKNTRA 245
V + P Y Y T M G I+ + P + P + +K T
Sbjct: 157 TVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFP----DLSKAKRTDI 212
Query: 246 ILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYE 304
I +P+NPTG TR +L + + +N ++ D Y D +I +PG E
Sbjct: 213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADE 272
Query: 305 RTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334
+ S K TG ++GW + P L +
Sbjct: 273 VAIETCSFSKYAGFTGVRLGWTVVPKALKY 302
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 17/300 (5%)
Query: 130 AAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189
A + I N+Y V E +A+ K +G+ V + + +G E + +
Sbjct: 51 ATVDKIATELNRYPERDAV-ELRDELAAYITKQTGVAVTRDN-LWAANGSNEILQQLLQA 108
Query: 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITL-RPPDFAIPIE-ELKSTISKNTRAIL 247
PG + F P Y + + G + I + R DF I ++ L+ +K +
Sbjct: 109 FGGPGRTALGFQPSYSMH--PILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVF 166
Query: 248 MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTV 307
+ TP+NPTG + + +++ I ++ +V DE Y + F + L + V
Sbjct: 167 VTTPNNPTGDVTSLDDVERIINVA---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLV 221
Query: 308 TMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYE 367
++ K F G ++G+ +A P V L + S Q AA ALR
Sbjct: 222 VSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVR--LPYHLSALSQAAAIVALRHSADTLG 279
Query: 368 ELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCE--YLIKEVGV 425
+++ S ++ + L +G+ V PS + D + H AF + LI++VG+
Sbjct: 280 TVEK-LSVERVRVAARLEELGYAVVPSESNFVFFGDFSD-QHAAWQAFLDRGVLIRDVGI 337
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 17/300 (5%)
Query: 130 AAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189
A + I N+Y V E +A+ K +G+ V + + +G E + +
Sbjct: 54 ATVDKIATELNRYPERDAV-ELRDELAAYITKQTGVAVTRDN-LWAANGSNEILQQLLQA 111
Query: 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITL-RPPDFAIPIE-ELKSTISKNTRAIL 247
PG + F P Y + + G + I + R DF I ++ L+ +K +
Sbjct: 112 FGGPGRTALGFQPSYSMH--PILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVF 169
Query: 248 MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTV 307
+ TP+NPTG + + +++ I ++ +V DE Y + F + L + V
Sbjct: 170 VTTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAYAE--FSPSPSATTLLEKYPTKLV 224
Query: 308 TMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYE 367
++ K F G ++G+ +A P V L + S Q AA ALR
Sbjct: 225 VSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVR--LPYHLSALSQAAAIVALRHSADTLG 282
Query: 368 ELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCE--YLIKEVGV 425
+++ S ++ + L +G+ V PS + D + H AF + LI++VG+
Sbjct: 283 TVEK-LSVERVRVAARLEELGYAVVPSESNFVFFGDFSD-QHAAWQAFLDRGVLIRDVGI 340
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 11/154 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI-NPGDEVILF 200
Y+ G+ AIAS G + + ++ +T G + + + LI N D +++
Sbjct: 130 YSHSQGIHGLRDAIASGIASRDGFPANAD-DIFLTDGASPGVHLMMQLLIRNEKDGILVP 188
Query: 201 APFYDSYEATLSMAGAKI--------KCITLRPPDFAIPIEELKSTISKNTRAILMNTPH 252
P Y Y A++++ G + L D +E+ +S N RA+++ P
Sbjct: 189 IPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSR-GINVRALVVINPG 247
Query: 253 NPTGKMFTREELNVIASLCIENDVLVFSDEVYDK 286
NPTG++ E I C +++ +DEVY +
Sbjct: 248 NPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQE 281
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 122/300 (40%), Gaps = 17/300 (5%)
Query: 130 AAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189
A + I N+Y V E +A+ K +G+ V + + +G E + +
Sbjct: 54 ATVDKIATELNRYPERDAV-ELRDELAAYITKQTGVAVTRDN-LWAANGSNEILQQLLQA 111
Query: 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITL-RPPDFAIPIE-ELKSTISKNTRAIL 247
PG + F P Y + + G + I + R DF I ++ L+ +K +
Sbjct: 112 FGGPGRTALGFQPSYSMH--PILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVF 169
Query: 248 MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTV 307
+ TP+NPTG + + +++ I ++ +V DE Y + F + L + V
Sbjct: 170 VTTPNNPTGDVTSLDDVERIINVA---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLV 224
Query: 308 TMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYE 367
++ F G ++G+ +A P V L + S Q AA ALR
Sbjct: 225 VSRTMSXAFDFAGGRLGYFVANPAFIDAVMLVR--LPYHLSALSQAAAIVALRHSADTLG 282
Query: 368 ELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCE--YLIKEVGV 425
+++ S ++ + L +G+ V PS + D + H AF + LI++VG+
Sbjct: 283 TVEK-LSVERVRVAARLEELGYAVVPSESNFVFFGDFSD-QHAAWQAFLDRGVLIRDVGI 340
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 128/333 (38%), Gaps = 42/333 (12%)
Query: 127 VKDAAIQAIR---DGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183
+K A++ + D QY G A+A +K + + + E+ +G +A+
Sbjct: 61 IKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDIPMS-KVEIMTVAGSQQAL 119
Query: 184 AATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDF-AIPIEELKSTIS-- 240
+NPGD +++ AP Y A I+ P+F +IP+++ +
Sbjct: 120 DLIGRVFLNPGDPIVVEAPTY----------LAAIQAFKYYDPEFISIPLDDKGMRVDLL 169
Query: 241 -----------KNTRAIL-MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA 288
K + + ++T NP G + + + L E D L+ D Y +L
Sbjct: 170 EEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELR 229
Query: 289 FEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348
+ + Y R + + + K + G++IGW A PHL + A + T+
Sbjct: 230 YSGEPTPPIKHFDDYGRVIYLGTFSKILA-PGFRIGWVAAHPHLIRKMEIAKQSIDLCTN 288
Query: 349 TPMQWAATAALRAPETYYEE----LKRDYSAKKAILVEGLNAV---GFKVFPSSGTYFVV 401
T Q A A Y +E + Y ++ ++E L G + G FV
Sbjct: 289 TFGQ--AIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVR 346
Query: 402 VDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434
V P G +T + + K GV +P F+
Sbjct: 347 VT-LPEGIDTKLMMERAVAK--GVAYVPGEAFF 376
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 169 PEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDF 228
P + +G TE+I GL P +I+ P + Y L+ +G +I+ +LR D
Sbjct: 75 PASWILAGNGETESIFTVASGL-KPRRAMIV-TPGFAEYGRALAQSGCEIRRWSLREADG 132
Query: 229 AIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY-DKL 287
+ + ++ + + + TP+NPTG + R L IA C ++ + DE + D +
Sbjct: 133 WQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFI 192
Query: 288 AFEMDHI-SIASLPGMYERTVTMNSLGKTFSLTGWKIGWAI 327
E I ++ P ++ + SL K +++ G ++G+ +
Sbjct: 193 PHETGFIPALKDNPHIW----VLRSLTKFYAIPGLRLGYLV 229
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 94/229 (41%), Gaps = 31/229 (13%)
Query: 117 GFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVD-PEKEVT 174
G P P + IQ +R+G + Y G+PE ASRF K + +D P +
Sbjct: 52 GVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQE-ASRFAK-LFVNIDIPARACV 109
Query: 175 VTSGCTEAIAATIL----GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAI 230
T G + + L N + P ++ + + G K + L F
Sbjct: 110 PTVGSXQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDL----FEY 165
Query: 231 PIEELKSTISKNTR-----AILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYD 285
E+L+ + + +I+ + P+NPT + T EEL +I L ++DV+V D Y
Sbjct: 166 RGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCXTDEELRIIGELATKHDVIVIEDLAYF 225
Query: 286 KLAFEMDHISIASLPG--MYERTV---TMN-----SLGKTFSLTGWKIG 324
F D+ S PG +Y+ +V T N S FS G +IG
Sbjct: 226 GXDFRKDY----SHPGEPLYQPSVANYTDNYILALSSSXAFSYAGQRIG 270
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 229 AIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA 288
I + +++ R+IL+ P+NP G +F E LN + L D V DE++ L
Sbjct: 137 GINLHDVEKGFQAGARSILLCNPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIHAPLV 196
Query: 289 FEMDHISIASL 299
F+ H A +
Sbjct: 197 FDGQHTVAAGV 207
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGSCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 163 SGLEVDPEK-EVTVTSGCTEAIA-----ATILGLINPGDEVILFAPFYDSYEATLSMAGA 216
+G V PE ++ G T A+A I GL+ GD+V + P + Y +A
Sbjct: 156 AGGAVPPESVDLFAVEGGTAAMAYIFESLRISGLLKAGDKVAIGMPVFTPYIEIPELAQY 215
Query: 217 KIKCITLRP-PD--FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE 273
+K + + PD + EL + + P NP + L+ + ++ E
Sbjct: 216 DLKEVPIHADPDNGWQYSDAELDKLKDPDVKIFFCVNPSNPPSVKMDQRSLDRVRAIVAE 275
Query: 274 N--DVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIG 324
D+L+ +D+VY A E + + P T+ + S K F TGW++G
Sbjct: 276 QRPDLLILTDDVYGTFADEFQSL-FSVCP---RNTLLVYSFSKYFGATGWRLG 324
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 102/261 (39%), Gaps = 31/261 (11%)
Query: 153 SAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS 212
S+ A R K +V EV + +G E I+ L PG +V P + Y +
Sbjct: 68 SSEALRAKLKEVXQVPAGXEVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQ 127
Query: 213 MAGAKIKCITLRPPDFAIPIEELKSTISKNTRAIL-MNTPHNPTGKMFTREELNVI---- 267
AG + + LR DF + + +++ AI+ + P+NPTG +F + I
Sbjct: 128 FAGLEFVGVPLRA-DFTLDRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAA 186
Query: 268 -ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY-ERTVTMNSLGKTFSLTGWKIGW 325
S+C LV DE Y A E + + RTV+ L G ++G+
Sbjct: 187 QGSVCRS---LVVVDEAYQPFAQESWXSRLTDFGNLLVXRTVS------KLGLAGIRLGY 237
Query: 326 AIAPPHLTW-----GVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380
P W VR ++ +T + A+ +E A+++ +
Sbjct: 238 VAGDPQ--WLEQLDKVRPPYNVNVLTEATALFALEHVAV------LDEQAAQLRAERSRV 289
Query: 381 VEGLNA-VGFKVFPSSGTYFV 400
EG A G VFPS+ + +
Sbjct: 290 AEGXAAHGGVTVFPSAANFLL 310
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPG 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGWCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPG 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVRRVWVSNPG 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGYCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVRRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
pdb|1ARI|B Chain B, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
Length = 396
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 HPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGFCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 13/158 (8%)
Query: 176 TSGCTEAIAATILGL-----INPGDEVILFAPFYDSYEATLSMAGAKIKCITL---RPPD 227
T G T AI L + GD++ + P + Y + ++ + L D
Sbjct: 170 TEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKND 229
Query: 228 FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVL-VFSDEVYDK 286
+ I E++ + +A+++ P NPT K F LN I +N L + SDEVY
Sbjct: 230 WEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLXIISDEVYG- 288
Query: 287 LAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIG 324
AF + SI S+ T + S F TGW++G
Sbjct: 289 -AFVPNFKSIYSVVPY--NTXLVYSYSXLFGCTGWRLG 323
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G + A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D + A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAFQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 24/232 (10%)
Query: 167 VDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP 226
V PE EV +T+G +A+ ++ G V+L AP Y + G + +T+
Sbjct: 89 VRPE-EVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRF--LTVPAG 145
Query: 227 DFAIPIEELKSTISKNTRAILMNTP--HNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
+ ++ L+ + + L P NPTG + + + +E ++V D+ Y
Sbjct: 146 EEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAY 205
Query: 285 DKLAFEMDHISIASLPGMYE--------RTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV 336
+L F A LP ++E + + S K S G ++ +A+A P +
Sbjct: 206 RELYF-----GEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQKL 259
Query: 337 RQAHSFLTFATSTPMQWAATAALRAPETYYEEL---KRDYSAKKAILVEGLN 385
QA T Q L+ E + E L +R Y K ++ L+
Sbjct: 260 VQAKQGADLHTPMLNQMLVHELLK--EGFSERLERVRRVYREKAQAMLHALD 309
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 202 PFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTR 261
P +D Y A ++++G ++ + D + + +S++ +L N P NPTG+ +
Sbjct: 98 PGFDGYRARIAVSG--LRHFEIGLTDDLLLDPNDLAQVSRDDCVVLAN-PSNPTGQALSA 154
Query: 262 EELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY-ERTVTMNSLGKTFSLTG 320
EL+ + +L+ DE Y +D+ S + Y E + S K++ L G
Sbjct: 155 GELDQLRQRA--GKLLI--DETY------VDYSSFRARGLAYGENELVFRSFSKSYGLAG 204
Query: 321 WKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAAL---RAPETYYEELKRDYSAKK 377
++G P L ++ F T A AAL RA E + + A++
Sbjct: 205 LRLGALFGPSELIAAXKRKQWFCNVGTLDLH--ALEAALDNDRAREAHIAKTL----AQR 258
Query: 378 AILVEGLNAVGFKVFPSSGTYFVVVDHT 405
+ + L +G++V SS FV+V++
Sbjct: 259 RRVADALRGLGYRV-ASSEANFVLVENA 285
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|3ZZK|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|4A00|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
Length = 396
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 88/231 (38%), Gaps = 17/231 (7%)
Query: 110 GAINLGQG-FPNFDGPDFVKDAAIQAIR-----DGKNQYARGHGVPEFNSAIASR-FKKD 162
G INLGQG + + G V + +A + + Y G+PEF F K
Sbjct: 27 GKINLGQGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKG 86
Query: 163 SGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKC 220
S L D T G T A +AA L V + P + ++++ + AG +++
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVRE 146
Query: 221 ITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEND 275
DF I L + + + HNPTG T E+ +A L +E
Sbjct: 147 YAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKG 205
Query: 276 VLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIG 324
L D A E D + + M++ + +S K F L ++G
Sbjct: 206 WLPLFDFAQQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVG 256
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
Length = 396
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSHNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm.
pdb|4F5M|B Chain B, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm
Length = 406
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 80 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 139
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 140 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 198
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S F
Sbjct: 199 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNF 258
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 259 GLYNERVG 266
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli
L-Aspartate Aminotransferase
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms At Ph 6.0
pdb|2QBT|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph 8.0)
pdb|2QA3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph6.5)
pdb|2QB2|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Dihydro-2thiophenecarboylic Acid (Sadta) Via Two
Mechanisms (At Ph 7.0).
pdb|2QB3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-aspartate Aminotransferase By
(s)-4,5-dihydro-2-thiophenecarboxylic Acid (sadta) Via
Two Mechanisms (at Ph 7.5)
pdb|3QN6|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An
Active-Site Mutant Of Aspartate Aminotransferase From
Escherichia Coli
pdb|4DBC|A Chain A, Substrate Activation In Aspartate Aminotransferase
Length = 396
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSANF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6.
pdb|4F5K|B Chain B, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6
Length = 406
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G + A +AA L V + P
Sbjct: 80 GLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPT 139
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ +++A + AG +++ DF I L + + + HNPTG
Sbjct: 140 WPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGAD 198
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKL--AFEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y E D + + M++ + +S F
Sbjct: 199 PTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRGLEEDAEGLRAFAAMHKELIVASSCSXNF 258
Query: 317 SLTGWKIG 324
SL ++G
Sbjct: 259 SLYNERVG 266
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 108/271 (39%), Gaps = 20/271 (7%)
Query: 170 EKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFA 229
E+E+ T+G E I L++ + P + Y + GA+++ I L D
Sbjct: 84 EEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNALIEGAEVREIPLL-QDGE 142
Query: 230 IPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLC--IENDVLVFSDEVYDKL 287
+E + I + T + + P+NPTG EL I + + +DVLV DE Y +
Sbjct: 143 HDLEGXLNAIDEKTTIVWICNPNNPTGNYI---ELADIQAFLDRVPSDVLVVLDEAYIEY 199
Query: 288 AFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL-TFA 346
L Y+ + + K + L ++G+ IA + +RQ + F
Sbjct: 200 VTPQPE-KHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEI---IRQLNIVRPPFN 255
Query: 347 TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTP 406
T++ Q A A++ E + + K K++P++G FV++D
Sbjct: 256 TTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGN-FVLID--- 311
Query: 407 FGHETDIAFC-----EYLIKEVGVVAIPTSV 432
G E F Y+ + + PT+V
Sbjct: 312 LGIEAGTIFSYLEKNGYITRSGAALGFPTAV 342
>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4.
pdb|4F5I|B Chain B, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4
Length = 406
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G + A +AA L V + P
Sbjct: 80 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPT 139
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ +++A + AG +++ DF I L + + + HNPTG
Sbjct: 140 WPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 198
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKL--AFEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y E D + + M++ + +S F
Sbjct: 199 PTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRGLEEDAEGLRAFAAMHKELIVASSCSXNF 258
Query: 317 SLTGWKIG 324
SL ++G
Sbjct: 259 SLYNERVG 266
>pdb|3RQ1|A Chain A, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|B Chain B, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|C Chain C, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|D Chain D, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
Length = 418
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 125/330 (37%), Gaps = 55/330 (16%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEV--TVTSGCTEAIAATILGLINPGDEVIL 199
YA G+P+F A +K+ PE + T+G T I I PGDEV+
Sbjct: 76 YAPIAGIPDFLCAA----EKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLT 131
Query: 200 FAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI----SKNTRAILM-NTP-HN 253
++ +Y S G + +L E ++ + +K T +++ NTP +N
Sbjct: 132 ADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNN 191
Query: 254 PTGKMFTREE----LNVIASLCI--ENDVLVFSDEVYDKLAFEMDHI-----SIASLPGM 302
PTG ++ LN + L N+V++ D Y + E D + + LP
Sbjct: 192 PTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKE 251
Query: 303 YERTVTMNSLGKTFSLTGWKIGWAI-----------------APPHLTWG--VRQAHSFL 343
T SL K F+ G ++G I + TW R A
Sbjct: 252 I-LTCVCYSLSKGFTXYGQRVGAXIGISDDEEIADEFFEVNKSTSRATWSNICRPAXRTX 310
Query: 344 TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVD 403
+ P ++ A R Y +L RD + I + VG P G +F+ +
Sbjct: 311 ANIVADPAKFKEYEAER---NCYYQLIRD---RADIFKQEAAQVGLPXLPYRGGFFITIP 364
Query: 404 HTPFGHETDIAFCEYLIKE-VGVVAIPTSV 432
++ A CE L KE + V+A+ +
Sbjct: 365 -----TDSANAICEELKKEHIYVIALANGI 389
>pdb|4EMY|A Chain A, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|B Chain B, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|C Chain C, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|D Chain D, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548
Length = 413
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEEL 235
T G T AI + I ++ GD +I ++ Y G K DFA I+
Sbjct: 107 TPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVY 166
Query: 236 KSTISKNTR-----AILMNTP-HNPTGKMFTREELNVIASL 270
K I + R A L+N+P +NPTG + EE + + +
Sbjct: 167 KEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITF 207
>pdb|1E5E|A Chain A, Methionine Gamma-Lyase (Mgl) From Trichomonas Vaginalis In
Complex With Propargylglycine
pdb|1E5E|B Chain B, Methionine Gamma-Lyase (Mgl) From Trichomonas Vaginalis In
Complex With Propargylglycine
pdb|1E5F|A Chain A, Methionine Gamma-Lyase (Mgl) From Trichomonas Vaginalis
pdb|1E5F|B Chain B, Methionine Gamma-Lyase (Mgl) From Trichomonas Vaginalis
Length = 404
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 176 TSGCTEAIAATILGLINPGDEVI----LFAPFYDSYEATLSMAGAKIKCITLRPPDFAIP 231
TS AIAAT+L ++ GD +I L+ + +E L+ G ++ I + AIP
Sbjct: 83 TSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFI-----NTAIP 137
Query: 232 IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
E+K + NT+ + TP NPT K+ E V + VLV +D +
Sbjct: 138 -GEVKKHMKPNTKIVYFETPANPTLKIIDMER--VCKDAHSQEGVLVIADNTF 187
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
pdb|1TOG|B Chain B, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G + A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNF 248
Query: 317 SLTGWKIG 324
+L ++G
Sbjct: 249 ALYNERVG 256
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOK|A Chain A, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
pdb|1TOK|B Chain B, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
Length = 396
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G + A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNF 248
Query: 317 SLTGWKIG 324
+L ++G
Sbjct: 249 ALYNERVG 256
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASC|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1SPA|A Chain A, Role Of Asp222 In The Catalytic Mechanism Of Escherichia
Coli Aspartate Aminotransferase: The Amino Acid Residue
Which Enhances The Function Of The Enzyme-Bound Coenzyme
Pyridoxal 5'-Phosphate
Length = 396
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L Y A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFAFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT
pdb|1ARH|B Chain B, Aspartate Aminotransferase, Y225rR386A MUTANT
Length = 396
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G T A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D A E D + + M++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFARQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOI|A Chain A, Hydrocinnamic Acid-Bound Structure Of Hexamutant + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 71/188 (37%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G + A +AA L V + P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 WPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y A E D + + M++ + +S F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNF 248
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 249 GLYNERVG 256
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 70/188 (37%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G + A +AA L V + P
Sbjct: 80 GLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPS 139
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ +++A + AG +++ DF I L + + + HNPTG
Sbjct: 140 WPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGAD 198
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKL--AFEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y E D + + M++ + +S F
Sbjct: 199 PTLEQWQTLAQLSVEKGWLPLIDFAYQGFGRGLEEDAEGLRAFAAMHKELIVASSYSXNF 258
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 259 GLYNERVG 266
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 70/188 (37%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G + A +AA L V + P
Sbjct: 80 GLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPS 139
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ +++A + AG +++ DF I L + + + HNPTG
Sbjct: 140 WPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGAD 198
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKL--AFEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y E D + + M++ + +S F
Sbjct: 199 PTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRGLEEDAEGLRAFAAMHKELIVASSCSXNF 258
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 259 GLYNERVG 266
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 70/188 (37%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G + A +AA L V + P
Sbjct: 80 GLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPS 139
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ +++A + AG +++ DF I L + + + HNPTG
Sbjct: 140 WPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGAD 198
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKL--AFEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y E D + + M++ + +S F
Sbjct: 199 PTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRGLEEDAEGLRAFAAMHKELIVASSCSXNF 258
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 259 GLYNERVG 266
>pdb|2RFV|A Chain A, High Resolution Structure Of L-Methionine Gamma-Lyase From
Citrobacter Freundii
Length = 398
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 13/169 (7%)
Query: 119 PNFDGPDFVKDAAIQAIRDGKNQYA---RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV 175
P F FV D+A Q G ++A G+ + +K + E +
Sbjct: 30 PIFQTSTFVFDSAEQ----GAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLAT 85
Query: 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEEL 235
SG + AI T+L L GD ++ + Y A LS + K I +R D A P EE+
Sbjct: 86 ASGIS-AITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFG-INVRFVDAAKP-EEI 142
Query: 236 KSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
++ + T+ + + TP NPT + ++ +A + + L+ D +
Sbjct: 143 RAAMRPETKVVYIETPANPT---LSLVDIETVAGIAHQQGALLVVDNTF 188
>pdb|3VK2|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK3|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK4|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
Length = 398
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 170 EKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFA 229
E + + SG AI +T+ L+ PGDEV+L Y A L + + LR D A
Sbjct: 81 EAGLALASGMG-AITSTLWTLLRPGDEVLLGNTLYGHTFAFLHHGIGEFG-VKLRHVDMA 138
Query: 230 IPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
++ L++ ++ TR I +P NP M ++ +A + ++ V D Y
Sbjct: 139 -DLQALEAAMTPATRVIYFESPANPNMHM---ADIAGVAKIARKHGATVVVDNTY 189
>pdb|1Y4I|A Chain A, Crystal Structure Of Citrobacter Freundii
L-Methionine-Lyase
Length = 398
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 13/169 (7%)
Query: 119 PNFDGPDFVKDAAIQAIRDGKNQYA---RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV 175
P F FV D+A Q G ++A G+ + +K + E +
Sbjct: 30 PIFQTSTFVFDSAEQ----GAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLAT 85
Query: 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEEL 235
SG + AI T+L L GD ++ + Y A LS + K I +R D P EE+
Sbjct: 86 ASGIS-AITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFG-INVRFVDAGKP-EEI 142
Query: 236 KSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
++ + T+ + + TP NPT + ++ +A + + L+ D +
Sbjct: 143 RAAMRPETKVVYIETPANPT---LSLVDIETVAGIAHQQGALLVVDNTF 188
>pdb|1GC0|A Chain A, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|B Chain B, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|C Chain C, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|D Chain D, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|A Chain A, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|B Chain B, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|C Chain C, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|D Chain D, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1UKJ|A Chain A, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|B Chain B, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|C Chain C, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|D Chain D, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|2O7C|A Chain A, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|B Chain B, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|C Chain C, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|D Chain D, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
Length = 398
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 170 EKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFA 229
E + + SG AI +T+ L+ PGDEV+L Y A L + + LR D A
Sbjct: 81 EAGLALASGMG-AITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFG-VKLRHVDMA 138
Query: 230 IPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
++ L++ ++ TR I +P NP M ++ +A + ++ V D Y
Sbjct: 139 -DLQALEAAMTPATRVIYFESPANPNMHM---ADIAGVAKIARKHGATVVVDNTY 189
>pdb|1PG8|A Chain A, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|B Chain B, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|C Chain C, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|D Chain D, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
Length = 398
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 170 EKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFA 229
E + + SG AI +T+ L+ PGDEV+L Y A L + + LR D A
Sbjct: 81 EAGLALASGMG-AITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFG-VKLRHVDMA 138
Query: 230 IPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
++ L++ ++ TR I +P NP M ++ +A + ++ V D Y
Sbjct: 139 -DLQALEAAMTPATRVIYFESPANPNMHM---ADIAGVAKIARKHGATVVVDNTY 189
>pdb|3B8X|A Chain A, Crystal Structure Of
Gdp-4-Keto-6-Deoxymannose-3-Dehydratase (Cold) H188n
Mutant With Bound Gdp-Perosamine
pdb|3B8X|B Chain B, Crystal Structure Of
Gdp-4-Keto-6-Deoxymannose-3-Dehydratase (Cold) H188n
Mutant With Bound Gdp-Perosamine
Length = 390
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 125 DFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE--- 181
D ++ AIQ++ D K + G V ++ + A F + V V+SG T
Sbjct: 14 DDLEYKAIQSVLDSK-MFTMGEYVKQYETQFAKTFG--------SKYAVMVSSGSTANLL 64
Query: 182 AIAATILG---LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKST 238
IAA + GDE+I+ A + + L G ++K + + I IE LK
Sbjct: 65 MIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEA 124
Query: 239 ISKNTRAIL-MNTPHNPT 255
++ +T+AIL +N NP
Sbjct: 125 VTDSTKAILTVNLLGNPN 142
>pdb|2GMS|A Chain A, E Coli Gdp-4-Keto-6-Deoxy-D-Mannose-3-Dehydratase With
Bound Hydrated Plp
pdb|2GMS|B Chain B, E Coli Gdp-4-Keto-6-Deoxy-D-Mannose-3-Dehydratase With
Bound Hydrated Plp
pdb|2GMU|A Chain A, Crystal Structure Of E Coli
Gdp-4-Keto-6-Deoxy-D-Mannose-3- Dehydratase Complexed
With Plp-Glutamate Ketimine Intermediate
pdb|2GMU|B Chain B, Crystal Structure Of E Coli
Gdp-4-Keto-6-Deoxy-D-Mannose-3- Dehydratase Complexed
With Plp-Glutamate Ketimine Intermediate
Length = 390
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 125 DFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE--- 181
D ++ AIQ++ D K + G V ++ + A F + V V+SG T
Sbjct: 14 DDLEYKAIQSVLDSK-MFTMGEYVKQYETQFAKTFG--------SKYAVMVSSGSTANLL 64
Query: 182 AIAATILG---LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKST 238
IAA + GDE+I+ A + + L G ++K + + I IE LK
Sbjct: 65 MIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEA 124
Query: 239 ISKNTRAIL-MNTPHNPT 255
++ +T+AIL +N NP
Sbjct: 125 VTDSTKAILTVNLLGNPN 142
>pdb|2R0T|A Chain A, Crystal Sructure Of
Gdp-4-Keto-6-Deoxymannose-3-Dehydratase With A Trapped
Plp-Glutamate Geminal Diamine
pdb|2R0T|B Chain B, Crystal Sructure Of
Gdp-4-Keto-6-Deoxymannose-3-Dehydratase With A Trapped
Plp-Glutamate Geminal Diamine
Length = 390
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 125 DFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE--- 181
D ++ AIQ++ D K + G V ++ + A F + V V+SG T
Sbjct: 14 DDLEYKAIQSVLDSK-MFTMGEYVKQYETQFAKTFG--------SKYAVMVSSGSTANLL 64
Query: 182 AIAATILG---LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKST 238
IAA + GDE+I+ A + + L G ++K + + I IE LK
Sbjct: 65 MIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEA 124
Query: 239 ISKNTRAIL-MNTPHNPT 255
++ +T+AIL +N NP
Sbjct: 125 VTDSTKAILTVNLLGNPN 142
>pdb|3GR9|A Chain A, Crystal Structure Of Cold H188k S187n
pdb|3GR9|B Chain B, Crystal Structure Of Cold H188k S187n
pdb|3GR9|C Chain C, Crystal Structure Of Cold H188k S187n
pdb|3GR9|D Chain D, Crystal Structure Of Cold H188k S187n
pdb|3GR9|E Chain E, Crystal Structure Of Cold H188k S187n
pdb|3GR9|F Chain F, Crystal Structure Of Cold H188k S187n
pdb|3GR9|G Chain G, Crystal Structure Of Cold H188k S187n
pdb|3GR9|H Chain H, Crystal Structure Of Cold H188k S187n
Length = 390
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 125 DFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE--- 181
D ++ AIQ++ D K + G V ++ + A F + V V+SG T
Sbjct: 14 DDLEYKAIQSVLDSK-MFTMGEYVKQYETQFAKTFG--------SKYAVMVSSGSTANLL 64
Query: 182 AIAATILG---LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKST 238
IAA + GDE+I+ A + + L G ++K + + I IE LK
Sbjct: 65 MIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEA 124
Query: 239 ISKNTRAIL-MNTPHNPT 255
++ +T+AIL +N NP
Sbjct: 125 VTDSTKAILTVNLLGNPN 142
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/218 (17%), Positives = 90/218 (41%), Gaps = 11/218 (5%)
Query: 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPI 232
+ + +G +E I +I + +++++ P Y YE G + + + I
Sbjct: 81 IVLGNGASEIIELSI----SLFEKILIIVPSYAEYEINAKKHGVSV-VFSYLDENMCIDY 135
Query: 233 EELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD 292
E++ S I + ++++ P+NP G + +E+ + L E + DE + + +
Sbjct: 136 EDIISKID-DVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPS 194
Query: 293 HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSFLTFATSTPM 351
+ + Y + ++ K F++ G + G+ I + ++ + + +
Sbjct: 195 SSFVGEIKN-YSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQN--PWNINCFA 251
Query: 352 QWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGF 389
+ AA L+ Y EE ++ +E LN +GF
Sbjct: 252 EMAAINCLKDT-NYIEESLLWIKKERKRFIEELNKIGF 288
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 69/188 (36%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G + A + A L V + P
Sbjct: 80 GLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVGADFLAKNTSVKRVWVSNPS 139
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ +++A + AG +++ DF I L + + + HNPTG
Sbjct: 140 WPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFHGCCHNPTGID 198
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKL--AFEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L D Y E D + + M++ + +S F
Sbjct: 199 PTLEQWQTLAQLSVEKGWLPLIDFAYQGFGRGLEEDAEGLRAFAAMHKELIVASSYSXNF 258
Query: 317 SLTGWKIG 324
L ++G
Sbjct: 259 GLYNERVG 266
>pdb|3TAT|A Chain A, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|B Chain B, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|C Chain C, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|D Chain D, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|E Chain E, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|F Chain F, Tyrosine Aminotransferase From E. Coli
Length = 397
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 14/91 (15%)
Query: 243 TRAILMNTP--HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKL-------AFEMDH 293
R+I++ P HNPTG T ++ + + + +++ F D Y A+ +
Sbjct: 172 ARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRA 231
Query: 294 ISIASLPGMYERTVTMNSLGKTFSLTGWKIG 324
I+ A LP + NS K FSL G ++G
Sbjct: 232 IASAGLPAL-----VSNSFSKIFSLYGERVG 257
>pdb|3JW9|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Citrobacter Freundii With S-Ethyl-Cysteine
Length = 398
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 13/169 (7%)
Query: 119 PNFDGPDFVKDAAIQAIRDGKNQYA---RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV 175
P F FV D+A Q G ++A G+ + +K + E +
Sbjct: 30 PIFQTSTFVFDSAEQ----GAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLAT 85
Query: 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEEL 235
SG + AI T+L L GD ++ + Y A LS + K I + D A P EE+
Sbjct: 86 ASGIS-AITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFG-INVSFVDAAKP-EEI 142
Query: 236 KSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
++ + T+ + + TP NPT + ++ +A + + L+ D +
Sbjct: 143 RAAMRPETKVVYIETPANPT---LSLVDIETVAGIAHQQGALLVVDNTF 188
>pdb|3MKJ|A Chain A, Methionine Gamma-Lyase From Citrobacter Freundii With
Pyridoximine-5'- Phosphate
Length = 398
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEEL 235
T+ AI T+L L GD ++ + Y A LS + K I + D A P EE+
Sbjct: 85 TASGISAITTTLLTLCQQGDHIVSASAIYGXTHAFLSHSMPKFG-INVSFVDAAKP-EEI 142
Query: 236 KSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
++ + T+ + + TP NPT + ++ +A + + L+ D +
Sbjct: 143 RAAMRPETKVVYIETPANPT---LSLVDIETVAGIAHQQGALLVVDNTF 188
>pdb|3JWA|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Citrobacter Freundii With Methionine Phosphinate
pdb|3JWB|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Citrobacter Freundii With Norleucine
Length = 398
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 13/169 (7%)
Query: 119 PNFDGPDFVKDAAIQAIRDGKNQYA---RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV 175
P F FV D+A Q G ++A G+ + +K + E +
Sbjct: 30 PIFQTSTFVFDSAEQ----GAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLAT 85
Query: 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEEL 235
SG + AI T+L L GD ++ + Y A LS + K I + D A P EE+
Sbjct: 86 ASGIS-AITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFG-INVSFVDAAKP-EEI 142
Query: 236 KSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
++ + T+ + + TP NPT + ++ +A + + L+ D +
Sbjct: 143 RAAMRPETKVVYIETPANPT---LSLVDIETVAGIAHQQGALLVVDNTF 188
>pdb|1PFF|A Chain A, Crystal Structure Of Homocysteine Alpha-, Gamma-Lyase At
1.8 Angstroms
pdb|1PFF|B Chain B, Crystal Structure Of Homocysteine Alpha-, Gamma-Lyase At
1.8 Angstroms
Length = 331
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 176 TSGCTEAIAATILGLINPGDEVI----LFAPFYDSYEATLSMAGAKIKCITLRPPDFAIP 231
T+ AIAA++ + GD +I L+ + +E L G ++ I D A+P
Sbjct: 19 TASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFI-----DMAVP 73
Query: 232 IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
++ + NTR + TP NPT K+ E + + + D+LV D +
Sbjct: 74 -GNIEKHLKPNTRIVYFETPANPTLKVIDIE--DAVKQARKQKDILVIVDNTF 123
>pdb|3FSL|A Chain A, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|B Chain B, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|C Chain C, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|D Chain D, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|E Chain E, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|F Chain F, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
Length = 397
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 238 TISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKL-------AFE 290
T+ + +L HNPTG T ++ + + + +++ F D Y A+
Sbjct: 169 TLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYA 228
Query: 291 MDHISIASLPGMYERTVTMNSLGKTFSLTGWKIG 324
+ I+ A LP + NS K FSL G ++G
Sbjct: 229 IRAIASAGLPAL-----VSNSFSKIFSLYGERVG 257
>pdb|2CB1|A Chain A, Crystal Structure Of O-Actetyl Homoserine Sulfhydrylase
From Thermus Thermophilus Hb8,Oah2
Length = 412
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 33/186 (17%)
Query: 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNS------AIASRFKKD 162
HGA+ G P + V + + +G+ ++A G G A+ R K
Sbjct: 17 HGAV----GLPIYA----VAAYGFKTLEEGQERFATGEGYVYARQKDPTAKALEERLKAL 68
Query: 163 SGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVI----LFAPFYDSYEATLSMAGAKI 218
G E V + A A +L L+ PGDEV+ LF + LS+ G +
Sbjct: 69 EG-----ALEAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTV 123
Query: 219 KCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLV 278
+ + P E ++ +S TRA+ + T NP +L +A+L E V +
Sbjct: 124 RYVDPEP-------EAVREALSAKTRAVFVETVANPA---LLVPDLEALATLAEEAGVAL 173
Query: 279 FSDEVY 284
D +
Sbjct: 174 VVDNTF 179
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 128 KDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187
+DA ++A R KN+ + + +A+ + ++ + +T+G +E I A I
Sbjct: 39 RDAVVKANRYAKNE------ILXLGNKLAAHHQVEA-------PSILLTAGSSEGIRAAI 85
Query: 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNT--RA 245
+ ++++ Y E +AG K+ + ++A IE LK+ ++ +
Sbjct: 86 EAYASLEAQLVIPELTYGDGEHFAKIAGXKVTKVKXLD-NWAFDIEGLKAAVAAYSGPSI 144
Query: 246 ILMNTPHNPTGKMFTREELNV-IASLCIENDVLVFSDEVYDKLAFEMDHISIA-SLPGMY 303
+ + P+NPTG + + + IAS +V DE Y + + SI+ +
Sbjct: 145 VYLVNPNNPTGTITPADVIEPWIASKPANTXFIV--DEAYAEFVNDPRFRSISPXITQGA 202
Query: 304 ERTVTMNSLGKTFSLTGWKIGWAIAPP 330
E + + + K + G ++G+A+A P
Sbjct: 203 ENIILLKTFSKIHAXAGXRVGYAVAHP 229
>pdb|3HT4|A Chain A, Crystal Structure Of The Q81a77_baccr Protein From
Bacillus Cereus. Northeast Structural Genomics
Consortium Target Bcr213
pdb|3HT4|B Chain B, Crystal Structure Of The Q81a77_baccr Protein From
Bacillus Cereus. Northeast Structural Genomics
Consortium Target Bcr213
pdb|3HT4|C Chain C, Crystal Structure Of The Q81a77_baccr Protein From
Bacillus Cereus. Northeast Structural Genomics
Consortium Target Bcr213
pdb|3HT4|D Chain D, Crystal Structure Of The Q81a77_baccr Protein From
Bacillus Cereus. Northeast Structural Genomics
Consortium Target Bcr213
pdb|3HT4|E Chain E, Crystal Structure Of The Q81a77_baccr Protein From
Bacillus Cereus. Northeast Structural Genomics
Consortium Target Bcr213
pdb|3HT4|F Chain F, Crystal Structure Of The Q81a77_baccr Protein From
Bacillus Cereus. Northeast Structural Genomics
Consortium Target Bcr213
pdb|3HT4|G Chain G, Crystal Structure Of The Q81a77_baccr Protein From
Bacillus Cereus. Northeast Structural Genomics
Consortium Target Bcr213
pdb|3HT4|H Chain H, Crystal Structure Of The Q81a77_baccr Protein From
Bacillus Cereus. Northeast Structural Genomics
Consortium Target Bcr213
Length = 431
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 21/182 (11%)
Query: 156 ASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILF-APFYDSYEATLSMA 214
A F ++GL V P+ + SG T AI+ + G++ PGDE++ YD+ E + +
Sbjct: 75 ADVFGAEAGL-VRPQ----IISG-THAISTALFGILRPGDELLYITGKPYDTLEEIVGVR 128
Query: 215 GAKIKCITLRPPDF-AIPI--------EELKSTISKNTRAI-LMNTPHNPTGKMFTREEL 264
G + + A+P+ E + + I NT+ I + + T FT ++
Sbjct: 129 GKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSNTKXIGIQRSKGYATRPSFTISQI 188
Query: 265 NVIASLC--IENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWK 322
+ I+ DV+VF D Y + E + + + + ++ N G G+
Sbjct: 189 KEXIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGA--DLXAGSLIKNPGGGIVKTGGYI 246
Query: 323 IG 324
+G
Sbjct: 247 VG 248
>pdb|3NU8|A Chain A, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With The
Internal Aldimine
pdb|3NU8|B Chain B, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With The
Internal Aldimine
Length = 359
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 129 DAAIQ-AIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187
DA IQ +R G QY G V E +A V + ++ +G T+A+
Sbjct: 19 DAGIQRVLRHG--QYILGPEVTELEDRLADF--------VGAKYCISCANG-TDALQIVQ 67
Query: 188 LGL-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAI 246
+ L + PGDEVI Y + T+++ GAK + + P + + + L++ I+ T+AI
Sbjct: 68 MALGVGPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAI 127
Query: 247 LMNTPHNPTGKMFTREELNVIAS 269
+ P + G+ + +N IAS
Sbjct: 128 I---PVSLYGQCADFDAINAIAS 147
>pdb|3NU7|A Chain A, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With The
Cofactor Pmp
pdb|3NU7|B Chain B, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With The
Cofactor Pmp
pdb|3NUB|A Chain A, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With Product
As The External Aldimine
pdb|3NUB|B Chain B, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With Product
As The External Aldimine
Length = 359
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 129 DAAIQ-AIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187
DA IQ +R G QY G V E +A V + ++ +G T+A+
Sbjct: 19 DAGIQRVLRHG--QYILGPEVTELEDRLADF--------VGAKYCISCANG-TDALQIVQ 67
Query: 188 LGL-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAI 246
+ L + PGDEVI Y + T+++ GAK + + P + + + L++ I+ T+AI
Sbjct: 68 MALGVGPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAI 127
Query: 247 LMNTPHNPTGKMFTREELNVIAS 269
+ P + G+ + +N IAS
Sbjct: 128 I---PVSLYGQCADFDAINAIAS 147
>pdb|3PD6|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 19/231 (8%)
Query: 112 INLGQGFPNFDG------PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGL 165
+NLG G D P K A A ++ +Y G+ EF A A ++
Sbjct: 31 MNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENNE 90
Query: 166 EVDPEKEVTVTS----GCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCI 221
+ + VTV + G A+ + +V L P + ++ AG +++
Sbjct: 91 VLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGY 150
Query: 222 TLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDV 276
P DF+ +E++ S I + + +L HNPTG E+ IAS+ + ++
Sbjct: 151 RYYDPKTCGFDFSGALEDI-SKIPEQSVLLLHACAHNPTGVDPRPEQWKEIASVVKKKNL 209
Query: 277 LVFSDEVYDKLAFEMDHISIASLPGMYERTVTM---NSLGKTFSLTGWKIG 324
F D Y A ++ E+ + + S K L G ++G
Sbjct: 210 FAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVG 260
>pdb|3NYU|A Chain A, X-Ray Crystal Structure Of The Wbpe (Wlbe)
Aminotransferase From Pseudomonas Aeruginosa As The Plp
Internal Aldimine Adduct With Lysine 185
pdb|3NYU|B Chain B, X-Ray Crystal Structure Of The Wbpe (Wlbe)
Aminotransferase From Pseudomonas Aeruginosa As The Plp
Internal Aldimine Adduct With Lysine 185
pdb|3NYU|C Chain C, X-Ray Crystal Structure Of The Wbpe (Wlbe)
Aminotransferase From Pseudomonas Aeruginosa As The Plp
Internal Aldimine Adduct With Lysine 185
pdb|3NYU|D Chain D, X-Ray Crystal Structure Of The Wbpe (Wlbe)
Aminotransferase From Pseudomonas Aeruginosa As The Plp
Internal Aldimine Adduct With Lysine 185
Length = 367
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 129 DAAIQ-AIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187
DA IQ +R G QY G V E +A V + ++ +G T+A+
Sbjct: 19 DAGIQRVLRHG--QYILGPEVTELEDRLADF--------VGAKYCISCANG-TDALQIVQ 67
Query: 188 LGL-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAI 246
+ L + PGDEVI Y + T+++ GAK + + P + + + L++ I+ T+AI
Sbjct: 68 MALGVGPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAI 127
Query: 247 LMNTPHNPTGKMFTREELNVIAS 269
+ P + G+ + +N IAS
Sbjct: 128 I---PVSLYGQCADFDAINAIAS 147
>pdb|1VJO|A Chain A, Crystal Structure Of Alanine--Glyoxylate Aminotransferase
(Alr1004) From Nostoc Sp. At 1.70 A Resolution
Length = 393
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFY--DSYEATLSMAGAKIKCITLRPPDFAI 230
+ V+ T A ATI + PGD V++ Y + GA ++ I+ +P
Sbjct: 88 IAVSGTGTAAXEATIANAVEPGDVVLIGVAGYFGNRLVDXAGRYGADVRTIS-KPWGEVF 146
Query: 231 PIEELKSTISKNTRAIL-MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEV 283
+EEL++ + + AIL + TG R+ L + LC E L+ D V
Sbjct: 147 SLEELRTALETHRPAILALVHAETSTG---ARQPLEGVGELCREFGTLLLVDTV 197
>pdb|3NYS|A Chain A, X-Ray Structure Of The K185a Mutant Of Wbpe (Wlbe) From
Pseudomonas Aeruginosa In Complex With Plp At 1.45
Angstrom Resolution
pdb|3NYT|A Chain A, X-Ray Crystal Structure Of The Wlbe (Wpbe)
Aminotransferase From Pseudomonas Aeruginosa, Mutation
K185a, In Complex With The Plp External Aldimine Adduct
With Udp-3-Amino-2-N-Acetyl-Glucuronic Acid, At 1.3
Angstrom Resolution
Length = 367
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 129 DAAIQ-AIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187
DA IQ +R G QY G V E +A V + ++ +G T+A+
Sbjct: 19 DAGIQRVLRHG--QYILGPEVTELEDRLADF--------VGAKYCISCANG-TDALQIVQ 67
Query: 188 LGL-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAI 246
+ L + PGDEVI Y + T+++ GAK + + P + + + L++ I+ T+AI
Sbjct: 68 MALGVGPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAI 127
Query: 247 LMNTPHNPTGKMFTREELNVIAS 269
+ P + G+ + +N IAS
Sbjct: 128 I---PVSLYGQCADFDAINAIAS 147
>pdb|3MEB|A Chain A, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
pdb|3MEB|B Chain B, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
Length = 448
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA---FEMDHISIASLPGMYERTVT 308
HNP+G FT + + + E + F D Y A FE D ++ +
Sbjct: 212 HNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLV 271
Query: 309 MNSLGKTFSLTGWKIG 324
S K F L G +IG
Sbjct: 272 AQSFSKNFGLYGERIG 287
>pdb|3UAK|A Chain A, Crystal Structure Of De Novo Designed Cysteine Esterase
Ech14, Northeast Structural Genomics Consortium Target
Or54
pdb|3UAK|B Chain B, Crystal Structure Of De Novo Designed Cysteine Esterase
Ech14, Northeast Structural Genomics Consortium Target
Or54
Length = 406
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 67/188 (35%), Gaps = 11/188 (5%)
Query: 147 GVPEFNSAIASR-FKKDSGLEVDPEKEVTVTSGCTEA--IAATILGLINPGDEVILFAPF 203
G+PEF F K S L D T G A +AA L V ++ P
Sbjct: 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGHGALRVAADFLAKNTSVKRVWVYNPS 129
Query: 204 YDSYEATLSMAGAKIKCITLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258
+ ++ + AG +++ DF I L + + + HNPTG
Sbjct: 130 SNCSKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDV-VLFTGCCHNPTGID 188
Query: 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTF 316
T E+ +A L +E L Y A E D + + ++ + +S K F
Sbjct: 189 PTLEQWQTLAQLSVEKGWLPLFTFFYQGFARGLEEDAEGLRAFAAXHKELIVASSYSKNF 248
Query: 317 SLTGWKIG 324
L +G
Sbjct: 249 GLYNESVG 256
>pdb|3HLM|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3PD6|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 16/192 (8%)
Query: 112 INLGQG-FPNFDGPDFV-----KDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGL 165
+NLG G + + +G +V K A A ++ +Y G+ EF A A ++
Sbjct: 31 MNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENNE 90
Query: 166 EVDPEKEVTVTS----GCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCI 221
+ + VTV + G A+ + +V L P + ++ AG +++
Sbjct: 91 VLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGY 150
Query: 222 TLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDV 276
P DF+ +E++ S I + + +L HNPTG E+ IAS+ + ++
Sbjct: 151 RYYDPKTCGFDFSGALEDI-SKIPEQSVLLLHACAHNPTGVDPRPEQWKEIASVVKKKNL 209
Query: 277 LVFSDEVYDKLA 288
F D Y A
Sbjct: 210 FAFFDMAYQGFA 221
>pdb|1J9G|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S64c Mutant, Monomer Oxidised, At 2.4 Angstrom
Resolution
Length = 147
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG GD+ I
Sbjct: 7 YGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDCIEL 66
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 67 QDDFIPLFDSLEET-GAQGRKVAC 89
>pdb|1WSB|A Chain A, Flavodoxin Mutant- S64c
pdb|1WSW|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Dimer, Semiquinone State
pdb|1XYV|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Monomer, Semiquinone State
pdb|1XYY|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Homodimer, Oxidised State
Length = 148
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG GD+ I
Sbjct: 8 YGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDCIEL 67
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 68 QDDFIPLFDSLEET-GAQGRKVAC 90
>pdb|3AEJ|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Tetramer Containing Michaelis
Complex And Methionine- Pyridoxal-5'-Phosphate
pdb|3AEJ|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Tetramer Containing Michaelis
Complex And Methionine- Pyridoxal-5'-Phosphate
pdb|3AEJ|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Tetramer Containing Michaelis
Complex And Methionine- Pyridoxal-5'-Phosphate
pdb|3AEL|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine
Imine-Pyridoxamine-5'-Phosphate And Alpha-Amino-Alpha,
Beta-Butenoic Acid-Pyridoxal-5'-Phosphate
pdb|3AEL|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine
Imine-Pyridoxamine-5'-Phosphate And Alpha-Amino-Alpha,
Beta-Butenoic Acid-Pyridoxal-5'-Phosphate
pdb|3AEL|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine
Imine-Pyridoxamine-5'-Phosphate And Alpha-Amino-Alpha,
Beta-Butenoic Acid-Pyridoxal-5'-Phosphate
pdb|3AEL|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine
Imine-Pyridoxamine-5'-Phosphate And Alpha-Amino-Alpha,
Beta-Butenoic Acid-Pyridoxal-5'-Phosphate
pdb|3AEM|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Methionine Imine- Pyridoxamine-5'-Phosphate
pdb|3AEM|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Methionine Imine- Pyridoxamine-5'-Phosphate
pdb|3AEM|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Methionine Imine- Pyridoxamine-5'-Phosphate
pdb|3AEN|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Alpha-Amino-Alpha, Beta-Butenoic
Acid-Pyridoxal-5'-Phosphate
pdb|3AEN|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Alpha-Amino-Alpha, Beta-Butenoic
Acid-Pyridoxal-5'-Phosphate
pdb|3AEO|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine Alpha,
Beta-Enamine-Pyridoxamine- 5'-Phosphate
pdb|3AEO|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine Alpha,
Beta-Enamine-Pyridoxamine- 5'-Phosphate
pdb|3AEO|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine Alpha,
Beta-Enamine-Pyridoxamine- 5'-Phosphate
pdb|3AEO|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine Alpha,
Beta-Enamine-Pyridoxamine- 5'-Phosphate
pdb|3AEP|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Alpha-Amino-Alpha,
Beta-Butenoic Acid- Pyridoxal-5'-Phosphate
pdb|3AEP|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Alpha-Amino-Alpha,
Beta-Butenoic Acid- Pyridoxal-5'-Phosphate
pdb|3AEP|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Alpha-Amino-Alpha,
Beta-Butenoic Acid- Pyridoxal-5'-Phosphate
pdb|3AEP|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Alpha-Amino-Alpha,
Beta-Butenoic Acid- Pyridoxal-5'-Phosphate
Length = 389
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 21/116 (18%)
Query: 182 AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPI--------E 233
AI+++ L + GD +I Y G + T P F I + E
Sbjct: 86 AISSSTLAFLQKGDHLIAGDTLY----------GCTVSLFTHWLPRFGIEVDLIDTSDVE 135
Query: 234 ELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 289
++K+ NT+ + + +P NPT K+ ++ IA +C E + D + F
Sbjct: 136 KVKAAWKPNTKMVYLESPANPTCKV---SDIKGIAVVCHERGARLVVDATFTSPCF 188
>pdb|3ACZ|A Chain A, Crystal Structure Of Entamoeba Histolytica Methionine
Gamma-Lyase 1
pdb|3ACZ|B Chain B, Crystal Structure Of Entamoeba Histolytica Methionine
Gamma-Lyase 1
pdb|3ACZ|C Chain C, Crystal Structure Of Entamoeba Histolytica Methionine
Gamma-Lyase 1
pdb|3ACZ|D Chain D, Crystal Structure Of Entamoeba Histolytica Methionine
Gamma-Lyase 1
pdb|3AEJ|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Tetramer Containing Michaelis
Complex And Methionine- Pyridoxal-5'-Phosphate
pdb|3AEM|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Methionine Imine- Pyridoxamine-5'-Phosphate
pdb|3AEN|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Alpha-Amino-Alpha, Beta-Butenoic
Acid-Pyridoxal-5'-Phosphate
pdb|3AEN|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Alpha-Amino-Alpha, Beta-Butenoic
Acid-Pyridoxal-5'-Phosphate
Length = 389
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 21/116 (18%)
Query: 182 AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPI--------E 233
AI+++ L + GD +I Y G + T P F I + E
Sbjct: 86 AISSSTLAFLQKGDHLIAGDTLY----------GCTVSLFTHWLPRFGIEVDLIDTSDVE 135
Query: 234 ELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 289
++K+ NT+ + + +P NPT K+ ++ IA +C E + D + F
Sbjct: 136 KVKAAWKPNTKMVYLESPANPTCKV---SDIKGIAVVCHERGARLVVDATFTSPCF 188
>pdb|1F4P|A Chain A, Y98w Flavodoxin Mutant 1.5a (D. Vulgaris)
Length = 147
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG GD+ I
Sbjct: 7 YGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIEL 66
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 67 QDDFIPLFDSLEET-GAQGRKVAC 89
>pdb|1AKA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate- Binding Lysine Residue
Length = 401
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 16/192 (8%)
Query: 112 INLGQG-FPNFDGPDFV-----KDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGL 165
+NLG G + + +G +V K A+ A + +Y G+ +F A A ++
Sbjct: 31 MNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSE 90
Query: 166 EVDPEKEVTVT----SGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCI 221
+ VTV +G A + +V L P + ++ AG +++
Sbjct: 91 AFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAY 150
Query: 222 TLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDV 276
P DF +E++ S I + + +L HNPTG +E+ +AS+ + ++
Sbjct: 151 RYYDPKTCSLDFTGAMEDI-SKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNL 209
Query: 277 LVFSDEVYDKLA 288
L + D Y A
Sbjct: 210 LAYFDMAYQGFA 221
>pdb|7AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|7AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|A Chain A, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|B Chain B, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|1TAR|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAR|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1OXO|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1OXO|B Chain B, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1IVR|A Chain A, Structure Of Aspartate Aminotransferase
pdb|1AMA|A Chain A, Domain Closure In Mitochondrial Aspartate Aminotransferase
pdb|1MAP|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1MAQ|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1OXP|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Closed
Conformation
Length = 401
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 16/192 (8%)
Query: 112 INLGQG-FPNFDGPDFV-----KDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGL 165
+NLG G + + +G +V K A+ A + +Y G+ +F A A ++
Sbjct: 31 MNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSE 90
Query: 166 EVDPEKEVTVT----SGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCI 221
+ VTV +G A + +V L P + ++ AG +++
Sbjct: 91 AFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAY 150
Query: 222 TLRPP-----DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDV 276
P DF +E++ S I + + +L HNPTG +E+ +AS+ + ++
Sbjct: 151 RYYDPKTCSLDFTGAMEDI-SKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNL 209
Query: 277 LVFSDEVYDKLA 288
L + D Y A
Sbjct: 210 LAYFDMAYQGFA 221
>pdb|4H51|A Chain A, Crystal Structure Of A Putative Aspartate Aminotransferase
From Leishmania Major Friedlin
pdb|4H51|B Chain B, Crystal Structure Of A Putative Aspartate Aminotransferase
From Leishmania Major Friedlin
Length = 420
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 197 VILFAPFYDSYEATLSMAGAKIKCIT--LRPPDFAIPIEELKSTI---SKNTRAILMNTP 251
+ L P + ++ + AG K C P ++ E +K I + IL
Sbjct: 140 IYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCA 199
Query: 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA 288
HNPTG ++E+ N IASL + VF D Y A
Sbjct: 200 HNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYA 236
>pdb|1BU5|A Chain A, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
pdb|1BU5|B Chain B, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
Length = 147
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG GD+ I
Sbjct: 7 YGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIEL 66
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 67 QDDFIPLFDSLEET-GAQGRKVAC 89
>pdb|1C7E|A Chain A, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7E|B Chain B, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|A Chain A, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|B Chain B, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG GD+ I
Sbjct: 7 YGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIEL 66
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 67 QDDFIPLFDSLEET-GAQGRKVAC 89
>pdb|1I1O|A Chain A, Room Temperature Crystal Structure Flavodoxin D. Vulgaris
Mutant Y98h At 2.0 Ang. Resolution
Length = 147
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG GD+ I
Sbjct: 7 YGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIEL 66
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 67 QDDFIPLFDSLEET-GAQGRKVAC 89
>pdb|1AKQ|A Chain A, D95a Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1AKU|A Chain A, D95a Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1AKV|A Chain A, D95a Semiquinone Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG GD+ I
Sbjct: 7 YGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIEL 66
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 67 QDDFIPLFDSLEET-GAQGRKVAC 89
>pdb|1J8Q|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris Wild-Type At 1.35 Angstrom Resolution
pdb|2FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|3FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|4FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|5FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
Length = 147
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG GD+ I
Sbjct: 7 YGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIEL 66
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 67 QDDFIPLFDSLEET-GAQGRKVAC 89
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 142 YARGHGVPEFNSAIASRFKKDS-GLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILF 200
YA G+ E + +D+ L +D VT+ T ++ +N D ++L
Sbjct: 84 YAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLP 143
Query: 201 APFYDSYEATLSMA-GAKIKCITLRPPDFAIPIEELKSTI---SKNTRAILMNTPHNPTG 256
+ +Y+ + GA ++ + D + L + +K+ +++N P+NPTG
Sbjct: 144 EHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTG 203
Query: 257 KMFTREELNVI--ASLCIEN---DVLVFSDEVYDKLAFE 290
T +E+ I A + N V+ D+ Y L +E
Sbjct: 204 YTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYE 242
>pdb|1J9E|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S35c Mutant At 1.44 Angstrom Resolution
pdb|1XT6|A Chain A, S35c Flavodoxin Mutant In The Semiquinone State
Length = 147
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG GD+ I
Sbjct: 7 YGSTTGNTEYTAETIARELADAGYEVDCRDAASVEAGGLFEGFDLVLLGCSTWGDDSIEL 66
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 67 QDDFIPLFDSLEET-GAQGRKVAC 89
>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY4|B Chain B, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY5|A Chain A, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY5|B Chain B, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY8|A Chain A, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|1AY8|B Chain B, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|2AY1|A Chain A, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY1|B Chain B, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY2|A Chain A, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY2|B Chain B, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY3|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY3|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY4|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY4|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY5|A Chain A, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY5|B Chain B, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY6|A Chain A, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY6|B Chain B, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY7|A Chain A, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY7|B Chain B, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY8|A Chain A, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY8|B Chain B, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY9|A Chain A, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
pdb|2AY9|B Chain B, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
Length = 394
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI--AATILGLINPGDEVIL 199
YA G PEF A+ D GL+ + + T G T A+ A + + NP V +
Sbjct: 65 YAGLSGEPEFQKAMGELILGD-GLKSETTATL-ATVGGTGALRQALELARMANPDLRVFV 122
Query: 200 FAPFYDSYEATLSMAGAKIKCITLRPPDF---AIPIEELKSTIS---KNTRAILMNTPHN 253
P + ++ + ++ G ++ T R D + E +K+ ++ K +L HN
Sbjct: 123 SDPTWPNHVSIMNFMGLPVQ--TYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHN 180
Query: 254 PTGKMFTREELNVIASLCIENDVLVFSDEVY 284
PTG T ++ IAS+ + L D Y
Sbjct: 181 PTGANLTLDQWAEIASILEKTGALPLIDLAY 211
>pdb|1SVV|A Chain A, Initial Stuctural Analysis Of Leishmania Major Threonine
Aldolase
pdb|1SVV|B Chain B, Initial Stuctural Analysis Of Leishmania Major Threonine
Aldolase
Length = 359
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 136 RDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGD 195
RD Q+A G+G + + A A+R + L P+ +V SG T+ + P +
Sbjct: 36 RDNXTQHA-GYG-QDSHCAKAARLIGE--LLERPDADVHFISGGTQTNLIACSLALRPWE 91
Query: 196 EVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTR------AILMN 249
VI + S T ++ K +T PD + + +++S + +N ++
Sbjct: 92 AVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHXVIPKLVYI 151
Query: 250 TPHNPTGKMFTREELNVIASLCIENDVLVFSD 281
+ G +T++EL I++ C E+ + +F D
Sbjct: 152 SNTTEVGTQYTKQELEDISASCKEHGLYLFLD 183
>pdb|3ELP|B Chain B, Structure Of Cystationine Gamma Lyase
pdb|3ELP|A Chain A, Structure Of Cystationine Gamma Lyase
pdb|3ELP|C Chain C, Structure Of Cystationine Gamma Lyase
pdb|3ELP|D Chain D, Structure Of Cystationine Gamma Lyase
Length = 410
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 13/133 (9%)
Query: 182 AIAATILGLINPGDEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELKS 237
A TI L+ GD++I Y + S G KI + I+ L++
Sbjct: 97 AATVTITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSK------IKLLEA 150
Query: 238 TISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIA 297
I+ T+ + + TP NPT K+ E I D+++ D + F+ +++
Sbjct: 151 AITPETKLVWIETPTNPTQKVIDIEGCAHIVHK--HGDIILVVDNTFMSPYFQRP-LALG 207
Query: 298 SLPGMYERTVTMN 310
+ MY T MN
Sbjct: 208 ADISMYSATKYMN 220
>pdb|2NMP|A Chain A, Crystal Structure Of Human Cystathionine Gamma Lyase
pdb|2NMP|B Chain B, Crystal Structure Of Human Cystathionine Gamma Lyase
pdb|2NMP|C Chain C, Crystal Structure Of Human Cystathionine Gamma Lyase
pdb|2NMP|D Chain D, Crystal Structure Of Human Cystathionine Gamma Lyase
pdb|3COG|A Chain A, Crystal Structure Of Human Cystathionase (Cystathionine
Gamma Lyase) In Complex With Dl-Propargylglycine
pdb|3COG|B Chain B, Crystal Structure Of Human Cystathionase (Cystathionine
Gamma Lyase) In Complex With Dl-Propargylglycine
pdb|3COG|C Chain C, Crystal Structure Of Human Cystathionase (Cystathionine
Gamma Lyase) In Complex With Dl-Propargylglycine
pdb|3COG|D Chain D, Crystal Structure Of Human Cystathionase (Cystathionine
Gamma Lyase) In Complex With Dl-Propargylglycine
Length = 403
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 13/133 (9%)
Query: 182 AIAATILGLINPGDEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELKS 237
A TI L+ GD++I Y + S G KI + I+ L++
Sbjct: 93 AATVTITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSK------IKLLEA 146
Query: 238 TISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIA 297
I+ T+ + + TP NPT K+ E I D+++ D + F+ +++
Sbjct: 147 AITPETKLVWIETPTNPTQKVIDIEGCAHIVHK--HGDIILVVDNTFMSPYFQRP-LALG 203
Query: 298 SLPGMYERTVTMN 310
+ MY T MN
Sbjct: 204 ADISMYSATKYMN 216
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 239 ISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
I + T I ++ P NPTG + T EEL + L ++++ + D Y
Sbjct: 177 IGEETGXICVSRPTNPTGNVITDEELXKLDRLANQHNIPLVIDNAY 222
>pdb|1AAT|A Chain A, Oxoglutarate-Induced Conformational Changes In Cytosolic
Aspartate Aminotransferase
pdb|1AAT|B Chain B, Oxoglutarate-Induced Conformational Changes In Cytosolic
Aspartate Aminotransferase
Length = 411
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 71/196 (36%), Gaps = 20/196 (10%)
Query: 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA----IAATIL-----GLINPGDEV 197
G+PEF A ASR +K V G I A L G N V
Sbjct: 74 GLPEFR-ANASRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPV 132
Query: 198 ILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRA------ILMNTP 251
+ +P ++++ + AG K T R D A +L+ +S +A IL
Sbjct: 133 YVSSPTWENHNSVFMDAGFK-DIRTYRYWDAAKRGLDLQGLLSDMEKAPEFSIFILHACA 191
Query: 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA---FEMDHISIASLPGMYERTVT 308
HNPTG T +E IA++ + F D Y A E D ++
Sbjct: 192 HNPTGTDPTPDEWKQIAAVMKRRCLFPFFDSAYQGFASGNLEKDAWAVRYFVSEGFELFC 251
Query: 309 MNSLGKTFSLTGWKIG 324
S K F L ++G
Sbjct: 252 AQSFSKNFGLYNERVG 267
>pdb|1AKR|A Chain A, G61a Oxidized Flavodoxin Mutant
Length = 147
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG D+ I
Sbjct: 7 YGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWADDSIEL 66
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 67 QDDFIPLFDSLEET-GAQGRKVAC 89
>pdb|1AKT|A Chain A, G61n Oxidized Flavodoxin Mutant
Length = 147
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG D+ I
Sbjct: 7 YGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWNDDSIEL 66
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 67 QDDFIPLFDSLEET-GAQGRKVAC 89
>pdb|3DR4|A Chain A, Gdp-Perosamine Synthase K186a Mutant From Caulobacter
Crescentus With Bound Sugar Ligand
pdb|3DR4|B Chain B, Gdp-Perosamine Synthase K186a Mutant From Caulobacter
Crescentus With Bound Sugar Ligand
pdb|3DR4|C Chain C, Gdp-Perosamine Synthase K186a Mutant From Caulobacter
Crescentus With Bound Sugar Ligand
pdb|3DR4|D Chain D, Gdp-Perosamine Synthase K186a Mutant From Caulobacter
Crescentus With Bound Sugar Ligand
Length = 391
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPI 232
+ +G T A + I PGDEVI+ + Y + +++ GA + P F +
Sbjct: 75 IACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDA 134
Query: 233 EELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSD 281
+L++ I+ T+AI+ P + G++ +++ I + +++LV D
Sbjct: 135 AKLEALITPRTKAIM---PVHLYGQIC---DMDPILEVARRHNLLVIED 177
>pdb|3BN1|A Chain A, Crystal Structure Of Gdp-Perosamine Synthase
pdb|3BN1|B Chain B, Crystal Structure Of Gdp-Perosamine Synthase
pdb|3BN1|C Chain C, Crystal Structure Of Gdp-Perosamine Synthase
pdb|3BN1|D Chain D, Crystal Structure Of Gdp-Perosamine Synthase
Length = 373
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPI 232
+ +G T A + I PGDEVI+ + Y + +++ GA + P F +
Sbjct: 57 IACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDA 116
Query: 233 EELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSD 281
+L++ I+ T+AI+ P + G++ +++ I + +++LV D
Sbjct: 117 AKLEALITPRTKAIM---PVHLYGQIC---DMDPILEVARRHNLLVIED 159
>pdb|3DR7|A Chain A, Gdp-perosamine Synthase From Caulobacter Crescentus With
Bound Gdp-3-deoxyperosamine
pdb|3DR7|B Chain B, Gdp-perosamine Synthase From Caulobacter Crescentus With
Bound Gdp-3-deoxyperosamine
pdb|3DR7|C Chain C, Gdp-perosamine Synthase From Caulobacter Crescentus With
Bound Gdp-3-deoxyperosamine
pdb|3DR7|D Chain D, Gdp-perosamine Synthase From Caulobacter Crescentus With
Bound Gdp-3-deoxyperosamine
Length = 391
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPI 232
+ +G T A + I PGDEVI+ + Y + +++ GA + P F +
Sbjct: 75 IACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDA 134
Query: 233 EELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSD 281
+L++ I+ T+AI+ P + G++ +++ I + +++LV D
Sbjct: 135 AKLEALITPRTKAIM---PVHLYGQIC---DMDPILEVARRHNLLVIED 177
>pdb|1T57|A Chain A, Crystal Structure Of The Conserved Protein Mth1675 From
Methanobacterium Thermoautotrophicum
pdb|1T57|B Chain B, Crystal Structure Of The Conserved Protein Mth1675 From
Methanobacterium Thermoautotrophicum
pdb|1T57|C Chain C, Crystal Structure Of The Conserved Protein Mth1675 From
Methanobacterium Thermoautotrophicum
Length = 206
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 125 DFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSG---CTE 181
D +DA ++ G N YA H + I++RF + +E+ E V+ G C E
Sbjct: 95 DEARDALLE---RGVNVYAGSHALSGVGRGISNRFGGVTPVEIXAETLRXVSQGFKVCVE 151
Query: 182 -AIAATILGLINPGDEVI 198
AI A GLI +EVI
Sbjct: 152 IAIXAADAGLIPVDEEVI 169
>pdb|3MC6|A Chain A, Crystal Structure Of Scdpl1
Length = 497
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 215 GAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268
G K++ + L P + + + ++K I+KNT ++ + P+ P G E L IA
Sbjct: 179 GMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIA 232
>pdb|3MC6|C Chain C, Crystal Structure Of Scdpl1
Length = 497
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 215 GAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268
G K++ + L P + + + ++K I+KNT ++ + P+ P G E L IA
Sbjct: 179 GMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIA 232
>pdb|4F4E|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
pdb|4F4E|B Chain B, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
Length = 420
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 112 INLGQG-FPNFDGPDFVKDAAIQAIRDGKNQYA-----RGH----GVPEFNSAIASRFKK 161
+NLG G + N DG K ++A+RD + RG+ G+ +++++
Sbjct: 52 VNLGVGVYTNEDG----KIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLG 107
Query: 162 DSGLEVDPEKEVTVTS-GCTEA--IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKI 218
D + + VT + G T A I A L +NP +V + P ++++ A MAG ++
Sbjct: 108 DDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEV 167
>pdb|4EFF|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei
Length = 420
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 112 INLGQG-FPNFDGPDFVKDAAIQAIRDGKNQYA-----RGH----GVPEFNSAIASRFKK 161
+NLG G + N DG K ++A+RD + RG+ G+ +++++
Sbjct: 52 VNLGVGVYTNEDG----KIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLG 107
Query: 162 DSGLEVDPEKEVTVTS-GCTEA--IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKI 218
D + + VT + G T A I A L +NP +V + P ++++ A MAG ++
Sbjct: 108 DDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEV 167
>pdb|1AZL|A Chain A, G61v Flavodoxin Mutant From Desulfovibrio Vulgaris
Length = 147
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG D+ I
Sbjct: 7 YGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWVDDSIEL 66
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 67 QDDFIPLFDSLEET-GAQGRKVAC 89
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 232 IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284
+E L + AI + P NPTG + T EE +A + D+ + D Y
Sbjct: 196 LENLPALKEGRIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAY 248
>pdb|1AKW|A Chain A, G61l Oxidized Flavodoxin Mutant
Length = 147
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVIL- 199
Y G E+ + +R D+G EVD +V +G E +LG D+ I
Sbjct: 7 YGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWLDDSIEL 66
Query: 200 ---FAPFYDSYEATLSMAGAKIKC 220
F P +DS E T G K+ C
Sbjct: 67 QDDFIPLFDSLEET-GAQGRKVAC 89
>pdb|3FD0|A Chain A, Crystal Structure Of Putative Cystathionine Beta-Lyase
Involved In Aluminum Resistance (Np_470671.1) From
Listeria Innocua At 2.12 A Resolution
pdb|3FD0|B Chain B, Crystal Structure Of Putative Cystathionine Beta-Lyase
Involved In Aluminum Resistance (Np_470671.1) From
Listeria Innocua At 2.12 A Resolution
Length = 409
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 156 ASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVI-LFAPFYDSYEATL--- 211
AS FK ++ L V P+ + SG T AI+ + G++ PGDE++ + YD+ E +
Sbjct: 69 ASVFKTEAAL-VRPQ----IISG-THAISTVLFGILRPGDELLYITGEPYDTLEEIVGIR 122
Query: 212 SMAGAKIKCITLR------PPDFAIPIEELKSTISKNTRAILMNTPHNPTGK-MFTREEL 264
S +K + P+ I + IS NT+ I + + FT E++
Sbjct: 123 SEGQGSLKDFQIGYDAVPLLPNGEIDYPAVSKKISANTKXIGIQRSRGYADRPSFTIEKI 182
Query: 265 NVIASLC--IENDVLVFSDEVYDKL 287
+ I +++VF D Y +
Sbjct: 183 KEXVTFVKNINPNIIVFVDNCYGEF 207
>pdb|1O3U|A Chain A, Crystal Structure Of An Hepn Domain Protein (Tm0613) From
Thermotoga Maritima At 1.75 A Resolution
Length = 135
Score = 28.9 bits (63), Expect = 6.6, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 107 IKHGAINLGQGFPNFD--GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFK---- 160
++H +L GF N+ + A++A+ A G+ VP+F ++SRF+
Sbjct: 20 LEHAKHDLEHGFYNWACFSSQQAAEKAVKAVFQRXGAQAWGYSVPDFLGELSSRFEIPEE 79
Query: 161 -KDSGLEVD 168
D LE+D
Sbjct: 80 LMDHALELD 88
>pdb|1AJS|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 3/82 (3%)
Query: 246 ILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA---FEMDHISIASLPGM 302
+L HNPTG T E+ IAS+ + F D Y A E D +I
Sbjct: 187 VLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSE 246
Query: 303 YERTVTMNSLGKTFSLTGWKIG 324
S K F L ++G
Sbjct: 247 GFELFCAQSFSKNFGLYNERVG 268
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,268,525
Number of Sequences: 62578
Number of extensions: 493127
Number of successful extensions: 1560
Number of sequences better than 100.0: 196
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 1315
Number of HSP's gapped (non-prelim): 200
length of query: 434
length of database: 14,973,337
effective HSP length: 102
effective length of query: 332
effective length of database: 8,590,381
effective search space: 2852006492
effective search space used: 2852006492
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)