Query 013883
Match_columns 434
No_of_seqs 296 out of 2751
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 08:21:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013883.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013883hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 7.4E-61 1.6E-65 473.0 39.6 324 109-434 28-359 (393)
2 KOG0257 Kynurenine aminotransf 100.0 7.2E-60 1.6E-64 443.5 30.8 345 90-434 11-383 (420)
3 PLN00175 aminotransferase fami 100.0 6.3E-57 1.4E-61 451.2 43.5 353 82-434 27-379 (413)
4 PRK06348 aspartate aminotransf 100.0 5.2E-52 1.1E-56 412.9 41.3 344 89-434 8-354 (384)
5 PRK09082 methionine aminotrans 100.0 2.8E-52 6.1E-57 415.1 39.2 348 87-434 8-356 (386)
6 PRK12414 putative aminotransfe 100.0 8.4E-52 1.8E-56 411.3 40.2 328 106-434 26-354 (384)
7 PRK07366 succinyldiaminopimela 100.0 7.7E-52 1.7E-56 412.4 39.4 327 108-434 29-359 (388)
8 PRK08912 hypothetical protein; 100.0 1.4E-51 3.1E-56 410.4 40.3 344 91-434 8-353 (387)
9 PRK08068 transaminase; Reviewe 100.0 4.7E-51 1E-55 406.9 40.3 325 108-434 31-358 (389)
10 PRK07682 hypothetical protein; 100.0 5.5E-51 1.2E-55 405.0 38.4 324 109-433 20-344 (378)
11 PRK07681 aspartate aminotransf 100.0 1.4E-50 3E-55 404.7 40.5 323 108-434 31-357 (399)
12 PRK07777 aminotransferase; Val 100.0 1.3E-50 2.9E-55 403.4 40.2 344 91-434 6-352 (387)
13 PRK06207 aspartate aminotransf 100.0 1.3E-50 2.8E-55 405.1 39.3 323 110-434 40-371 (405)
14 TIGR03540 DapC_direct LL-diami 100.0 3.2E-50 6.9E-55 400.2 40.7 325 107-433 27-354 (383)
15 PRK08960 hypothetical protein; 100.0 2.6E-50 5.6E-55 401.3 39.8 322 108-434 31-355 (387)
16 PRK07683 aminotransferase A; V 100.0 4.9E-50 1.1E-54 399.0 41.0 338 96-434 14-352 (387)
17 PRK09276 LL-diaminopimelate am 100.0 6E-50 1.3E-54 398.5 40.5 324 108-433 30-356 (385)
18 PRK08636 aspartate aminotransf 100.0 6.6E-50 1.4E-54 400.2 40.5 326 108-433 32-368 (403)
19 PRK05942 aspartate aminotransf 100.0 8E-50 1.7E-54 398.5 40.2 324 108-433 34-360 (394)
20 PRK09147 succinyldiaminopimela 100.0 5E-50 1.1E-54 400.4 38.2 320 108-434 28-359 (396)
21 PRK09148 aminotransferase; Val 100.0 1E-49 2.2E-54 398.7 40.0 326 108-433 29-358 (405)
22 PRK07309 aromatic amino acid a 100.0 2.8E-49 6.1E-54 394.1 41.2 344 89-434 9-357 (391)
23 PRK06290 aspartate aminotransf 100.0 3E-49 6.5E-54 395.0 40.4 323 109-433 44-374 (410)
24 PRK06108 aspartate aminotransf 100.0 2.9E-49 6.2E-54 393.3 39.6 322 109-433 24-350 (382)
25 PRK07337 aminotransferase; Val 100.0 6.2E-49 1.3E-53 391.6 39.5 323 108-434 29-357 (388)
26 TIGR03538 DapC_gpp succinyldia 100.0 5.3E-49 1.2E-53 392.6 38.2 320 108-434 27-358 (393)
27 PLN00143 tyrosine/nicotianamin 100.0 6.8E-49 1.5E-53 393.2 37.8 325 106-433 29-374 (409)
28 PRK05957 aspartate aminotransf 100.0 2E-48 4.4E-53 387.7 41.1 342 89-434 6-353 (389)
29 PLN02187 rooty/superroot1 100.0 1.2E-48 2.5E-53 395.7 39.4 324 108-433 65-408 (462)
30 PRK06107 aspartate aminotransf 100.0 1.7E-48 3.6E-53 389.9 40.1 326 108-434 32-371 (402)
31 PRK06855 aminotransferase; Val 100.0 5E-49 1.1E-53 396.6 36.3 322 109-434 32-398 (433)
32 PTZ00377 alanine aminotransfer 100.0 5.3E-49 1.1E-53 401.5 36.5 324 109-434 46-443 (481)
33 PRK13355 bifunctional HTH-doma 100.0 8.2E-49 1.8E-53 403.3 38.0 345 85-434 117-483 (517)
34 PLN00145 tyrosine/nicotianamin 100.0 1E-48 2.2E-53 393.5 37.7 324 108-434 51-395 (430)
35 PRK08361 aspartate aminotransf 100.0 1.7E-48 3.8E-53 388.6 38.8 322 109-434 33-359 (391)
36 PLN02656 tyrosine transaminase 100.0 3.5E-48 7.6E-53 388.2 37.8 325 107-434 29-374 (409)
37 PLN02231 alanine transaminase 100.0 2.4E-48 5.1E-53 397.6 36.5 342 89-434 109-495 (534)
38 PTZ00433 tyrosine aminotransfe 100.0 4.5E-48 9.8E-53 387.9 37.8 326 106-434 30-379 (412)
39 PRK08363 alanine aminotransfer 100.0 6E-48 1.3E-52 385.6 37.7 324 108-433 29-362 (398)
40 PRK07324 transaminase; Validat 100.0 2.5E-48 5.4E-53 384.6 34.2 316 107-434 24-341 (373)
41 TIGR01264 tyr_amTase_E tyrosin 100.0 1.6E-47 3.6E-52 382.9 38.6 322 109-434 31-370 (401)
42 TIGR03537 DapC succinyldiamino 100.0 1.2E-47 2.6E-52 377.1 36.9 317 111-434 2-322 (350)
43 PTZ00376 aspartate aminotransf 100.0 1.4E-48 3.1E-53 390.5 30.4 315 109-431 29-378 (404)
44 PRK07590 L,L-diaminopimelate a 100.0 1.2E-47 2.7E-52 384.5 36.7 317 108-434 33-380 (409)
45 PRK09275 aspartate aminotransf 100.0 3.2E-48 6.9E-53 391.6 31.7 317 110-434 101-486 (527)
46 PRK07550 hypothetical protein; 100.0 7.6E-47 1.7E-51 376.3 39.4 324 107-433 27-354 (386)
47 PRK08175 aminotransferase; Val 100.0 4.8E-47 1E-51 378.6 37.7 324 108-433 28-357 (395)
48 PLN02368 alanine transaminase 100.0 6.1E-48 1.3E-52 383.4 30.6 295 108-404 37-395 (407)
49 PRK05764 aspartate aminotransf 100.0 1E-46 2.2E-51 376.5 39.5 326 108-434 30-362 (393)
50 PRK05839 hypothetical protein; 100.0 5.6E-47 1.2E-51 375.2 36.8 310 108-433 23-340 (374)
51 PRK09257 aromatic amino acid a 100.0 1.3E-47 2.7E-52 383.0 31.5 315 109-431 26-373 (396)
52 PLN02450 1-aminocyclopropane-1 100.0 1.2E-47 2.5E-52 389.0 31.4 321 110-434 39-398 (468)
53 PRK15481 transcriptional regul 100.0 8.4E-47 1.8E-51 381.0 34.1 309 110-434 86-398 (431)
54 PLN02397 aspartate transaminas 100.0 4.1E-47 9E-52 381.3 31.3 314 109-431 48-396 (423)
55 PRK07568 aspartate aminotransf 100.0 9.5E-46 2.1E-50 369.9 39.8 319 109-434 30-358 (397)
56 TIGR03801 asp_4_decarbox aspar 100.0 2.2E-46 4.8E-51 377.7 31.5 317 110-434 95-485 (521)
57 PLN02376 1-aminocyclopropane-1 100.0 2.6E-46 5.6E-51 380.5 31.9 322 110-434 47-406 (496)
58 PRK09265 aminotransferase AlaT 100.0 2.6E-45 5.6E-50 367.3 38.5 323 108-434 32-370 (404)
59 TIGR01265 tyr_nico_aTase tyros 100.0 3.9E-45 8.4E-50 365.7 39.6 324 108-434 30-372 (403)
60 PRK07865 N-succinyldiaminopime 100.0 1.3E-45 2.8E-50 364.6 35.5 305 109-433 27-336 (364)
61 COG1167 ARO8 Transcriptional r 100.0 2.7E-45 5.9E-50 369.9 38.0 318 109-434 89-421 (459)
62 COG1168 MalY Bifunctional PLP- 100.0 2.8E-45 6.1E-50 341.7 34.3 323 108-434 24-355 (388)
63 PLN02607 1-aminocyclopropane-1 100.0 1.4E-45 2.9E-50 371.2 32.3 321 110-434 48-405 (447)
64 TIGR03539 DapC_actino succinyl 100.0 2E-44 4.4E-49 355.0 36.3 306 108-433 20-330 (357)
65 TIGR03542 DAPAT_plant LL-diami 100.0 2.7E-44 5.8E-49 359.6 37.1 314 108-433 32-372 (402)
66 PRK01533 histidinol-phosphate 100.0 6.6E-45 1.4E-49 358.8 30.7 299 109-429 29-327 (366)
67 KOG0259 Tyrosine aminotransfer 100.0 8.3E-44 1.8E-48 329.2 33.1 322 110-434 62-404 (447)
68 PRK06836 aspartate aminotransf 100.0 1.5E-43 3.2E-48 353.3 37.8 314 109-434 33-362 (394)
69 PRK02610 histidinol-phosphate 100.0 7E-44 1.5E-48 353.2 34.1 309 110-433 29-347 (374)
70 PF00155 Aminotran_1_2: Aminot 100.0 3.3E-45 7.2E-50 361.6 24.3 320 110-434 2-339 (363)
71 PRK09440 avtA valine--pyruvate 100.0 1.2E-43 2.6E-48 356.7 34.1 319 108-434 29-373 (416)
72 PRK03158 histidinol-phosphate 100.0 6.7E-44 1.4E-48 351.8 31.2 303 110-433 30-332 (359)
73 PRK06358 threonine-phosphate d 100.0 2.2E-43 4.7E-48 347.1 34.1 302 110-433 20-324 (354)
74 PLN02672 methionine S-methyltr 100.0 1.1E-42 2.4E-47 370.8 40.2 320 108-433 696-1050(1082)
75 PRK05166 histidinol-phosphate 100.0 5.1E-43 1.1E-47 346.8 32.9 305 109-433 36-342 (371)
76 PRK03317 histidinol-phosphate 100.0 4.3E-43 9.4E-48 347.1 32.2 305 110-430 27-335 (368)
77 PRK07392 threonine-phosphate d 100.0 9E-43 2E-47 343.7 33.8 301 110-433 23-328 (360)
78 PRK14809 histidinol-phosphate 100.0 6.6E-43 1.4E-47 344.4 32.5 298 110-434 31-329 (357)
79 PRK09105 putative aminotransfe 100.0 7.1E-43 1.5E-47 345.0 31.6 294 109-427 43-336 (370)
80 PLN03026 histidinol-phosphate 100.0 3.9E-42 8.5E-47 341.1 33.1 300 109-432 52-352 (380)
81 PRK08056 threonine-phosphate d 100.0 9.3E-42 2E-46 335.9 34.0 301 110-433 21-324 (356)
82 COG0079 HisC Histidinol-phosph 100.0 4.8E-42 1E-46 333.5 31.4 299 110-431 23-322 (356)
83 PRK04870 histidinol-phosphate 100.0 7.2E-42 1.6E-46 336.9 32.6 300 109-434 26-328 (356)
84 PRK08153 histidinol-phosphate 100.0 1.1E-41 2.4E-46 336.8 33.0 301 110-431 33-335 (369)
85 PRK08637 hypothetical protein; 100.0 8.5E-42 1.8E-46 340.0 32.3 317 110-430 4-356 (388)
86 PRK05387 histidinol-phosphate 100.0 1E-41 2.2E-46 335.6 31.8 296 110-430 25-321 (353)
87 COG1448 TyrB Aspartate/tyrosin 100.0 2.5E-42 5.3E-47 322.1 24.5 339 74-432 3-374 (396)
88 PRK06225 aspartate aminotransf 100.0 1.1E-40 2.4E-45 331.3 36.1 312 108-433 27-343 (380)
89 PRK02731 histidinol-phosphate 100.0 6.2E-41 1.3E-45 331.7 32.5 305 109-433 32-337 (367)
90 PRK07908 hypothetical protein; 100.0 2.8E-40 6.1E-45 324.7 33.8 295 108-433 21-316 (349)
91 PRK14808 histidinol-phosphate 100.0 4.4E-40 9.6E-45 320.9 32.1 290 109-429 19-309 (335)
92 PRK01688 histidinol-phosphate 100.0 1.2E-40 2.6E-45 327.2 28.3 295 110-433 29-326 (351)
93 PRK03321 putative aminotransfe 100.0 2.6E-40 5.6E-45 325.4 30.1 299 110-429 23-322 (352)
94 PRK14807 histidinol-phosphate 100.0 9.5E-40 2.1E-44 321.0 33.8 296 110-432 23-321 (351)
95 TIGR01141 hisC histidinol-phos 100.0 3.5E-40 7.6E-45 323.7 30.5 301 110-433 20-321 (346)
96 PRK06425 histidinol-phosphate 100.0 4.3E-40 9.4E-45 320.9 30.2 286 110-433 17-302 (332)
97 PRK04781 histidinol-phosphate 100.0 1.1E-39 2.4E-44 321.8 31.1 296 110-433 32-333 (364)
98 KOG0256 1-aminocyclopropane-1- 100.0 6.6E-40 1.4E-44 305.9 25.0 293 139-434 114-429 (471)
99 PRK00950 histidinol-phosphate 100.0 1.2E-38 2.5E-43 314.8 31.9 296 110-433 35-331 (361)
100 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1E-38 2.3E-43 310.9 30.7 286 110-433 18-304 (330)
101 PRK03967 histidinol-phosphate 100.0 1.2E-38 2.5E-43 311.4 30.9 285 110-431 19-304 (337)
102 PRK04635 histidinol-phosphate 100.0 8.1E-39 1.8E-43 314.8 28.5 290 110-431 32-324 (354)
103 PRK08354 putative aminotransfe 100.0 7.6E-38 1.6E-42 302.4 32.7 276 110-434 9-284 (311)
104 KOG1411 Aspartate aminotransfe 100.0 1.2E-39 2.5E-44 297.7 16.4 338 70-428 25-397 (427)
105 PRK06959 putative threonine-ph 100.0 1.4E-37 3E-42 303.7 30.9 278 110-430 25-303 (339)
106 PRK05664 threonine-phosphate d 100.0 2.7E-37 5.8E-42 300.9 31.7 276 110-429 21-297 (330)
107 PRK13238 tnaA tryptophanase/L- 100.0 1.9E-36 4.1E-41 304.9 31.0 308 107-434 34-388 (460)
108 KOG1412 Aspartate aminotransfe 100.0 4.6E-37 1E-41 277.0 21.4 340 71-430 4-379 (410)
109 cd00609 AAT_like Aspartate ami 100.0 3.8E-34 8.2E-39 280.5 36.6 317 112-433 1-322 (350)
110 KOG0634 Aromatic amino acid am 100.0 2.5E-35 5.5E-40 277.5 26.1 290 139-434 93-429 (472)
111 COG3977 Alanine-alpha-ketoisov 100.0 1.8E-34 3.8E-39 259.3 26.7 320 107-434 28-373 (417)
112 KOG0258 Alanine aminotransfera 100.0 9.6E-33 2.1E-37 256.3 27.7 339 88-434 58-440 (475)
113 cd00617 Tnase_like Tryptophana 100.0 2.6E-31 5.6E-36 264.2 28.6 305 107-429 9-358 (431)
114 TIGR03576 pyridox_MJ0158 pyrid 100.0 2.5E-29 5.4E-34 245.3 32.8 282 117-433 28-313 (346)
115 TIGR01822 2am3keto_CoA 2-amino 100.0 1.2E-29 2.6E-34 253.4 29.6 297 107-428 36-349 (393)
116 PRK06939 2-amino-3-ketobutyrat 100.0 2.4E-29 5.2E-34 251.4 29.4 303 107-430 40-355 (397)
117 PLN02822 serine palmitoyltrans 100.0 1.1E-29 2.5E-34 257.9 27.4 307 108-430 108-437 (481)
118 TIGR00858 bioF 8-amino-7-oxono 100.0 6.1E-29 1.3E-33 245.1 30.3 299 108-432 15-329 (360)
119 PRK10534 L-threonine aldolase; 100.0 2.3E-29 4.9E-34 245.8 23.3 292 112-431 2-305 (333)
120 KOG0633 Histidinol phosphate a 100.0 1.4E-29 3.1E-34 223.6 17.7 311 93-428 25-342 (375)
121 TIGR01825 gly_Cac_T_rel pyrido 100.0 3.7E-28 7.9E-33 242.0 30.2 300 108-429 32-342 (385)
122 PRK02627 acetylornithine amino 100.0 1.6E-27 3.4E-32 238.3 26.6 306 108-431 38-364 (396)
123 PRK05958 8-amino-7-oxononanoat 100.0 7.7E-27 1.7E-31 232.3 30.8 302 107-431 37-350 (385)
124 PRK13392 5-aminolevulinate syn 100.0 3.4E-27 7.5E-32 236.8 28.3 297 110-431 47-360 (410)
125 PLN02721 threonine aldolase 100.0 2.7E-27 5.9E-32 232.9 26.7 300 110-433 6-324 (353)
126 cd06502 TA_like Low-specificit 100.0 5.4E-27 1.2E-31 229.3 24.8 289 121-430 8-310 (338)
127 cd06454 KBL_like KBL_like; thi 100.0 2.3E-26 5E-31 225.8 29.3 300 110-430 2-313 (349)
128 PLN02483 serine palmitoyltrans 100.0 2.1E-26 4.6E-31 234.4 29.4 296 109-429 100-427 (489)
129 cd00613 GDC-P Glycine cleavage 100.0 2.5E-26 5.4E-31 229.8 27.0 300 110-429 21-369 (398)
130 PRK10874 cysteine sulfinate de 100.0 1.1E-25 2.3E-30 225.5 31.3 300 110-433 19-358 (401)
131 TIGR00707 argD acetylornithine 100.0 1.9E-26 4.1E-31 229.2 25.0 299 109-431 27-351 (379)
132 PRK01278 argD acetylornithine 100.0 4E-26 8.6E-31 227.6 26.9 301 109-431 31-358 (389)
133 cd00378 SHMT Serine-glycine hy 100.0 6.6E-26 1.4E-30 227.0 28.4 300 110-429 20-339 (402)
134 TIGR03392 FeS_syn_CsdA cystein 99.9 1.7E-25 3.6E-30 223.9 30.2 299 110-433 16-355 (398)
135 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 7.2E-26 1.6E-30 224.1 26.1 260 149-430 54-338 (370)
136 PRK03244 argD acetylornithine 99.9 8.5E-26 1.8E-30 225.9 23.7 305 108-430 42-363 (398)
137 TIGR01821 5aminolev_synth 5-am 99.9 5.8E-25 1.3E-29 220.1 29.0 296 110-430 46-358 (402)
138 cd00610 OAT_like Acetyl ornith 99.9 1.6E-25 3.5E-30 225.0 25.0 311 108-430 35-384 (413)
139 PRK09064 5-aminolevulinate syn 99.9 1.4E-24 3E-29 217.8 29.3 297 109-430 46-359 (407)
140 PRK02948 cysteine desulfurase; 99.9 5E-25 1.1E-29 219.1 25.4 297 113-432 3-322 (381)
141 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.5E-24 5.5E-29 212.5 29.2 258 148-428 46-329 (361)
142 PF12897 Aminotran_MocR: Alani 99.9 2.8E-24 6.1E-29 201.7 27.2 326 93-433 8-379 (425)
143 TIGR01976 am_tr_V_VC1184 cyste 99.9 2.9E-24 6.3E-29 214.8 29.0 297 111-433 18-360 (397)
144 PRK07179 hypothetical protein; 99.9 3.1E-24 6.7E-29 215.2 29.2 293 108-427 53-357 (407)
145 PRK05093 argD bifunctional N-s 99.9 1.3E-24 2.9E-29 217.4 26.1 300 108-430 39-369 (403)
146 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 5.7E-24 1.2E-28 209.3 30.0 269 150-433 31-326 (355)
147 PRK00451 glycine dehydrogenase 99.9 2.1E-24 4.5E-29 219.1 27.3 297 110-433 69-414 (447)
148 TIGR01979 sufS cysteine desulf 99.9 7.6E-24 1.7E-28 212.2 31.0 296 110-431 18-359 (403)
149 cd06451 AGAT_like Alanine-glyo 99.9 5.6E-24 1.2E-28 209.7 29.5 289 123-432 10-324 (356)
150 PLN02409 serine--glyoxylate am 99.9 5.6E-24 1.2E-28 212.6 29.1 290 127-431 20-338 (401)
151 PRK09295 bifunctional cysteine 99.9 1.3E-23 2.8E-28 210.6 31.5 298 110-432 23-363 (406)
152 PRK02936 argD acetylornithine 99.9 4.6E-24 1E-28 211.9 27.8 303 108-431 28-349 (377)
153 PRK07049 methionine gamma-lyas 99.9 2.3E-24 5.1E-29 215.8 25.0 221 140-387 78-311 (427)
154 PLN02242 methionine gamma-lyas 99.9 1.6E-24 3.6E-29 216.2 23.3 217 148-393 78-303 (418)
155 PLN02855 Bifunctional selenocy 99.9 1.5E-23 3.2E-28 211.4 29.9 298 110-432 32-377 (424)
156 PRK13393 5-aminolevulinate syn 99.9 2.9E-23 6.2E-28 208.1 31.5 296 110-430 46-358 (406)
157 TIGR02326 transamin_PhnW 2-ami 99.9 2E-23 4.4E-28 206.3 29.6 293 124-433 11-331 (363)
158 PRK04073 rocD ornithine--oxo-a 99.9 3.5E-24 7.6E-29 213.9 23.7 298 108-430 39-366 (396)
159 PRK06234 methionine gamma-lyas 99.9 9.2E-24 2E-28 210.4 25.8 240 118-387 29-284 (400)
160 TIGR00713 hemL glutamate-1-sem 99.9 5.2E-24 1.1E-28 214.6 24.2 307 108-430 47-393 (423)
161 PRK08247 cystathionine gamma-s 99.9 2.5E-23 5.3E-28 205.3 27.1 225 148-404 54-287 (366)
162 PRK13479 2-aminoethylphosphona 99.9 7.8E-23 1.7E-27 202.4 29.8 265 149-432 40-331 (368)
163 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 7.1E-23 1.5E-27 203.8 29.0 296 110-428 19-348 (387)
164 cd06453 SufS_like Cysteine des 99.9 7.3E-23 1.6E-27 203.0 28.0 284 123-432 11-338 (373)
165 PLN03227 serine palmitoyltrans 99.9 8E-23 1.7E-27 203.3 27.7 298 112-429 1-339 (392)
166 PRK00011 glyA serine hydroxyme 99.9 9.5E-23 2E-27 205.1 28.2 300 110-429 26-343 (416)
167 cd06450 DOPA_deC_like DOPA dec 99.9 3.8E-23 8.2E-28 202.8 23.0 276 124-430 12-312 (345)
168 PRK08088 4-aminobutyrate amino 99.9 7E-23 1.5E-27 206.1 25.1 316 109-433 41-393 (425)
169 TIGR03235 DNA_S_dndA cysteine 99.9 6.6E-23 1.4E-27 201.8 24.4 289 122-433 9-324 (353)
170 PRK00854 rocD ornithine--oxo-a 99.9 6E-23 1.3E-27 205.6 24.2 297 109-430 41-370 (401)
171 PRK04260 acetylornithine amino 99.9 2.6E-22 5.6E-27 199.1 28.0 301 109-431 29-347 (375)
172 PRK12381 bifunctional succinyl 99.9 1.3E-22 2.8E-27 203.0 24.7 305 109-430 39-368 (406)
173 TIGR03403 nifS_epsilon cystein 99.9 3.5E-22 7.5E-27 198.8 26.8 289 123-433 11-324 (382)
174 TIGR01977 am_tr_V_EF2568 cyste 99.9 6.2E-22 1.3E-26 196.5 28.6 299 114-433 3-337 (376)
175 TIGR01437 selA_rel uncharacter 99.9 5.3E-22 1.1E-26 195.5 27.4 273 123-429 25-332 (363)
176 PRK13520 L-tyrosine decarboxyl 99.9 1.5E-21 3.2E-26 193.4 30.7 293 122-431 31-340 (371)
177 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.3E-21 2.8E-26 193.3 29.1 193 125-341 11-208 (376)
178 PTZ00125 ornithine aminotransf 99.9 2.7E-22 5.9E-27 200.8 24.2 308 109-431 31-365 (400)
179 PRK06460 hypothetical protein; 99.9 1.1E-21 2.3E-26 194.1 26.6 211 147-387 46-261 (376)
180 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3.2E-21 6.8E-26 191.3 29.8 276 125-428 14-321 (379)
181 TIGR03402 FeS_nifS cysteine de 99.9 2.3E-21 4.9E-26 192.7 28.0 283 122-433 10-321 (379)
182 TIGR03812 tyr_de_CO2_Arch tyro 99.9 5.7E-21 1.2E-25 189.4 30.0 290 123-430 32-344 (373)
183 TIGR03246 arg_catab_astC succi 99.9 1.6E-21 3.4E-26 194.7 26.0 299 108-429 34-363 (397)
184 PRK08133 O-succinylhomoserine 99.9 9.9E-22 2.2E-26 195.2 23.4 210 148-387 63-277 (390)
185 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 8.4E-21 1.8E-25 188.1 29.5 276 127-429 13-318 (375)
186 COG0156 BioF 7-keto-8-aminopel 99.9 6.4E-21 1.4E-25 185.3 26.4 297 108-430 38-352 (388)
187 PRK06767 methionine gamma-lyas 99.9 5.3E-21 1.1E-25 189.9 25.7 251 148-431 63-332 (386)
188 PRK08249 cystathionine gamma-s 99.9 6.1E-21 1.3E-25 189.7 26.0 210 148-387 66-280 (398)
189 TIGR02080 O_succ_thio_ly O-suc 99.9 4.5E-21 9.8E-26 189.7 23.3 217 140-387 46-268 (382)
190 COG0520 csdA Selenocysteine ly 99.9 9.4E-20 2E-24 180.3 32.1 299 110-433 22-365 (405)
191 PRK07503 methionine gamma-lyas 99.9 5.8E-21 1.2E-25 190.4 23.1 210 148-387 67-283 (403)
192 PRK08045 cystathionine gamma-s 99.9 1E-20 2.2E-25 187.3 24.5 216 141-387 48-269 (386)
193 PRK07810 O-succinylhomoserine 99.9 1.1E-20 2.4E-25 188.2 24.8 210 148-387 72-287 (403)
194 cd00614 CGS_like CGS_like: Cys 99.9 1.8E-20 3.8E-25 185.3 26.1 212 147-388 41-258 (369)
195 PRK07505 hypothetical protein; 99.9 3.3E-20 7.2E-25 185.7 28.1 296 108-430 45-361 (402)
196 PRK14012 cysteine desulfurase; 99.9 3E-20 6.5E-25 186.2 27.3 293 112-433 5-328 (404)
197 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 8.7E-22 1.9E-26 197.3 15.9 239 148-426 59-309 (418)
198 PRK07504 O-succinylhomoserine 99.9 1.4E-20 3.1E-25 187.3 24.0 210 148-387 67-282 (398)
199 TIGR02006 IscS cysteine desulf 99.9 4.7E-20 1E-24 184.6 27.8 260 112-392 5-288 (402)
200 PLN00144 acetylornithine trans 99.9 2.3E-20 5E-25 185.0 25.0 305 109-430 15-348 (382)
201 TIGR01325 O_suc_HS_sulf O-succ 99.9 3.9E-20 8.5E-25 183.3 26.5 210 148-387 56-270 (380)
202 PRK08776 cystathionine gamma-s 99.9 3E-20 6.5E-25 185.0 24.9 209 149-387 63-277 (405)
203 PRK00062 glutamate-1-semialdeh 99.9 1.9E-20 4.1E-25 188.4 23.7 303 108-430 49-395 (426)
204 PRK06777 4-aminobutyrate amino 99.9 4.2E-20 9.1E-25 185.4 25.7 314 109-433 40-391 (421)
205 PLN02624 ornithine-delta-amino 99.9 3E-20 6.5E-25 188.8 24.7 304 108-431 74-414 (474)
206 PRK07050 cystathionine beta-ly 99.9 4.8E-20 1E-24 183.2 25.3 210 148-387 67-282 (394)
207 TIGR01328 met_gam_lyase methio 99.9 2.6E-20 5.6E-25 185.0 23.4 210 148-387 61-277 (391)
208 PRK07811 cystathionine gamma-s 99.9 3.8E-20 8.2E-25 183.7 24.5 212 146-387 61-278 (388)
209 TIGR01885 Orn_aminotrans ornit 99.9 3E-20 6.4E-25 186.0 23.9 303 108-431 36-372 (401)
210 PRK09028 cystathionine beta-ly 99.9 5E-20 1.1E-24 181.8 24.9 237 120-387 34-277 (394)
211 PRK04366 glycine dehydrogenase 99.9 1.8E-19 3.9E-24 183.6 29.6 301 113-428 72-410 (481)
212 PRK09792 4-aminobutyrate trans 99.9 1.1E-19 2.3E-24 182.4 27.5 311 109-429 40-387 (421)
213 PLN02651 cysteine desulfurase 99.9 1.8E-19 3.8E-24 178.2 28.0 285 122-433 10-325 (364)
214 TIGR00700 GABAtrnsam 4-aminobu 99.9 6.5E-20 1.4E-24 184.3 25.0 316 109-433 33-390 (420)
215 PRK08861 cystathionine gamma-s 99.9 6.2E-20 1.3E-24 181.3 23.9 210 148-387 55-270 (388)
216 PRK04612 argD acetylornithine 99.9 2.4E-19 5.3E-24 178.8 28.2 308 108-430 39-372 (408)
217 PLN02955 8-amino-7-oxononanoat 99.9 3.3E-19 7.1E-24 177.3 28.5 289 110-430 103-423 (476)
218 TIGR03588 PseC UDP-4-keto-6-de 99.9 7.7E-19 1.7E-23 174.6 30.9 275 125-429 10-325 (380)
219 cd00616 AHBA_syn 3-amino-5-hyd 99.9 8.4E-19 1.8E-23 172.4 30.3 270 129-428 3-297 (352)
220 cd00615 Orn_deC_like Ornithine 99.9 3.5E-20 7.6E-25 177.6 19.8 221 148-385 61-293 (294)
221 COG4992 ArgD Ornithine/acetylo 99.9 1.3E-19 2.8E-24 173.1 22.7 298 108-431 41-368 (404)
222 PRK06918 4-aminobutyrate amino 99.8 5.2E-19 1.1E-23 179.2 28.0 315 108-433 53-413 (451)
223 PRK07582 cystathionine gamma-l 99.8 3.4E-19 7.5E-24 175.6 26.0 212 141-387 47-264 (366)
224 TIGR01324 cysta_beta_ly_B cyst 99.8 5.5E-19 1.2E-23 174.3 27.0 217 140-387 42-266 (377)
225 PRK08574 cystathionine gamma-s 99.8 2E-19 4.2E-24 178.3 23.0 210 147-387 54-269 (385)
226 PRK07269 cystathionine gamma-s 99.8 3.3E-19 7.1E-24 175.2 23.9 227 147-403 55-287 (364)
227 PRK05939 hypothetical protein; 99.8 2.9E-18 6.3E-23 170.4 28.9 163 140-329 39-207 (397)
228 PRK08360 4-aminobutyrate amino 99.8 1.9E-18 4E-23 174.1 27.5 308 109-429 41-394 (443)
229 PRK15407 lipopolysaccharide bi 99.8 1.8E-17 3.9E-22 166.7 33.6 203 112-340 26-246 (438)
230 PRK05968 hypothetical protein; 99.8 1.3E-18 2.9E-23 172.8 24.7 250 148-432 65-334 (389)
231 TIGR01329 cysta_beta_ly_E cyst 99.8 2E-18 4.4E-23 170.8 24.7 260 140-432 39-323 (378)
232 PRK05937 8-amino-7-oxononanoat 99.8 4.9E-18 1.1E-22 168.2 27.2 287 110-428 5-314 (370)
233 COG1104 NifS Cysteine sulfinat 99.8 1.9E-18 4.2E-23 165.3 23.2 290 121-434 11-327 (386)
234 PRK06058 4-aminobutyrate amino 99.8 3E-18 6.4E-23 173.2 26.0 313 108-432 55-411 (443)
235 PRK06702 O-acetylhomoserine am 99.8 2.3E-18 4.9E-23 171.5 23.5 211 148-387 63-310 (432)
236 TIGR03531 selenium_SpcS O-phos 99.8 1.4E-17 3.1E-22 165.6 28.7 265 148-425 103-386 (444)
237 PRK08248 O-acetylhomoserine am 99.8 2.2E-18 4.7E-23 172.8 22.6 156 148-329 66-225 (431)
238 PRK08064 cystathionine beta-ly 99.8 3.1E-18 6.7E-23 170.2 23.1 209 148-387 56-270 (390)
239 PRK07495 4-aminobutyrate amino 99.8 2.1E-17 4.5E-22 165.8 28.7 310 109-429 40-387 (425)
240 PLN02509 cystathionine beta-ly 99.8 7.4E-18 1.6E-22 169.4 25.3 221 138-387 123-349 (464)
241 PRK05967 cystathionine beta-ly 99.8 5.1E-18 1.1E-22 167.3 23.5 220 140-387 56-280 (395)
242 PRK07671 cystathionine beta-ly 99.8 6E-18 1.3E-22 167.3 23.0 209 148-387 52-266 (377)
243 TIGR02407 ectoine_ectB diamino 99.8 2.2E-17 4.7E-22 165.3 27.0 309 108-430 34-379 (412)
244 COG0399 WecE Predicted pyridox 99.8 5E-17 1.1E-21 157.0 28.4 271 124-426 14-311 (374)
245 COG0075 Serine-pyruvate aminot 99.8 5.7E-17 1.2E-21 156.4 27.5 267 149-432 37-330 (383)
246 PRK13580 serine hydroxymethylt 99.8 3.8E-17 8.3E-22 162.8 27.1 306 109-429 49-399 (493)
247 PRK13034 serine hydroxymethylt 99.8 8.4E-17 1.8E-21 161.3 29.8 297 110-429 29-346 (416)
248 PRK06084 O-acetylhomoserine am 99.8 7.4E-18 1.6E-22 168.8 22.0 156 148-329 60-219 (425)
249 PF00266 Aminotran_5: Aminotra 99.8 1.4E-16 2.9E-21 158.0 30.5 287 122-433 10-341 (371)
250 TIGR02618 tyr_phenol_ly tyrosi 99.8 1.2E-16 2.7E-21 157.0 29.2 273 138-427 63-374 (450)
251 COG0001 HemL Glutamate-1-semia 99.8 2.3E-17 4.9E-22 159.3 22.8 301 109-431 53-400 (432)
252 PRK08117 4-aminobutyrate amino 99.8 4.9E-17 1.1E-21 164.2 26.4 310 108-429 42-395 (433)
253 PF01041 DegT_DnrJ_EryC1: DegT 99.8 1.5E-16 3.2E-21 157.1 28.3 276 126-431 6-310 (363)
254 PRK06176 cystathionine gamma-s 99.8 4E-17 8.8E-22 161.5 22.4 209 148-387 52-266 (380)
255 PRK13237 tyrosine phenol-lyase 99.8 5.2E-16 1.1E-20 153.0 29.7 274 133-427 65-381 (460)
256 PRK09264 diaminobutyrate--2-ox 99.8 2.1E-16 4.5E-21 159.0 26.0 313 108-431 38-384 (425)
257 COG0160 GabT 4-aminobutyrate a 99.8 1.3E-16 2.8E-21 156.9 23.2 312 108-432 55-414 (447)
258 cd01494 AAT_I Aspartate aminot 99.8 3.7E-17 7.9E-22 142.9 16.3 165 149-329 3-170 (170)
259 PRK05964 adenosylmethionine--8 99.7 6E-16 1.3E-20 155.8 26.8 308 108-430 41-392 (423)
260 PRK03715 argD acetylornithine 99.7 7.8E-16 1.7E-20 153.2 27.2 301 108-429 35-361 (395)
261 TIGR00709 dat 2,4-diaminobutyr 99.7 7.3E-16 1.6E-20 155.6 27.1 311 108-430 38-402 (442)
262 KOG1360 5-aminolevulinate synt 99.7 4.3E-16 9.4E-21 146.0 23.0 294 112-429 175-485 (570)
263 PRK05994 O-acetylhomoserine am 99.7 2.4E-16 5.3E-21 158.2 22.6 155 148-328 65-223 (427)
264 PRK08593 4-aminobutyrate amino 99.7 1.4E-15 3E-20 153.6 26.4 311 108-429 41-397 (445)
265 PLN02482 glutamate-1-semialdeh 99.7 1.1E-15 2.4E-20 154.5 25.4 302 108-430 98-444 (474)
266 TIGR03372 putres_am_tran putre 99.7 2.1E-15 4.6E-20 151.3 26.3 300 108-429 74-410 (442)
267 PRK08134 O-acetylhomoserine am 99.7 9.2E-16 2E-20 153.9 23.0 155 148-328 66-224 (433)
268 PTZ00094 serine hydroxymethylt 99.7 3.6E-15 7.8E-20 151.3 27.6 300 110-428 35-362 (452)
269 TIGR01814 kynureninase kynuren 99.7 5.8E-15 1.3E-19 148.0 27.1 295 109-429 26-374 (406)
270 PLN03226 serine hydroxymethylt 99.7 9.6E-15 2.1E-19 148.0 28.7 304 110-431 35-376 (475)
271 PRK00615 glutamate-1-semialdeh 99.7 1.4E-15 2.9E-20 152.6 22.0 310 108-431 52-400 (433)
272 PRK07482 hypothetical protein; 99.7 5.6E-15 1.2E-19 149.7 26.5 310 108-429 49-421 (461)
273 KOG1368 Threonine aldolase [Am 99.7 2E-15 4.4E-20 136.7 20.2 288 124-433 35-340 (384)
274 PRK06541 hypothetical protein; 99.7 6E-15 1.3E-19 149.4 25.9 309 108-429 51-421 (460)
275 PLN02271 serine hydroxymethylt 99.7 1.4E-14 3.1E-19 145.1 27.9 271 144-429 188-495 (586)
276 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 4.5E-15 9.8E-20 146.0 23.4 217 140-387 47-274 (386)
277 PRK08114 cystathionine beta-ly 99.7 3.3E-15 7.2E-20 147.3 22.3 208 150-387 66-280 (395)
278 PRK07812 O-acetylhomoserine am 99.7 3.5E-15 7.6E-20 149.5 22.6 156 149-329 72-231 (436)
279 PRK11522 putrescine--2-oxoglut 99.7 9.1E-15 2E-19 147.8 25.4 307 108-430 81-418 (459)
280 PRK02769 histidine decarboxyla 99.7 3.3E-14 7.1E-19 140.3 28.7 243 148-400 63-325 (380)
281 PRK12389 glutamate-1-semialdeh 99.7 1.3E-14 2.9E-19 145.9 26.1 305 108-430 52-398 (428)
282 COG0112 GlyA Glycine/serine hy 99.7 1.3E-14 2.9E-19 137.0 24.1 300 110-429 27-344 (413)
283 COG2008 GLY1 Threonine aldolas 99.7 4.4E-15 9.6E-20 139.4 19.9 288 122-430 11-313 (342)
284 PF00464 SHMT: Serine hydroxym 99.7 4E-15 8.6E-20 145.3 20.3 264 148-428 64-359 (399)
285 KOG1549 Cysteine desulfurase N 99.7 4.9E-15 1.1E-19 142.6 20.2 200 110-330 43-257 (428)
286 TIGR01788 Glu-decarb-GAD gluta 99.7 4.2E-14 9.2E-19 141.4 27.6 294 122-427 52-388 (431)
287 PRK05965 hypothetical protein; 99.7 1.7E-14 3.6E-19 146.2 24.3 309 109-429 46-415 (459)
288 PRK05769 4-aminobutyrate amino 99.7 4.3E-14 9.3E-19 142.6 27.1 310 108-430 53-408 (441)
289 PRK07046 aminotransferase; Val 99.7 5E-14 1.1E-18 142.3 27.6 299 108-430 74-422 (453)
290 PRK07678 aminotransferase; Val 99.7 2.5E-14 5.5E-19 144.7 25.5 308 108-429 46-411 (451)
291 PRK06105 aminotransferase; Pro 99.7 4.5E-14 9.9E-19 143.1 26.8 311 109-430 48-419 (460)
292 PRK06917 hypothetical protein; 99.7 5.6E-14 1.2E-18 141.9 27.1 309 109-430 31-399 (447)
293 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.7E-14 3.6E-19 141.6 21.9 221 148-384 68-314 (417)
294 PLN02724 Molybdenum cofactor s 99.6 5.7E-14 1.2E-18 151.6 27.6 309 110-433 34-421 (805)
295 PRK07986 adenosylmethionine--8 99.6 2.2E-14 4.8E-19 143.8 22.6 308 108-430 42-393 (428)
296 PLN02414 glycine dehydrogenase 99.6 2.7E-14 5.8E-19 153.7 24.6 301 110-427 526-870 (993)
297 PLN02760 4-aminobutyrate:pyruv 99.6 6.8E-14 1.5E-18 142.8 26.4 311 108-430 88-461 (504)
298 PRK06938 diaminobutyrate--2-ox 99.6 5.6E-14 1.2E-18 142.4 25.4 312 108-430 62-427 (464)
299 PRK04013 argD acetylornithine/ 99.6 1.2E-14 2.7E-19 142.5 20.0 286 108-430 23-329 (364)
300 PRK06062 hypothetical protein; 99.6 9.2E-14 2E-18 140.5 26.8 244 108-361 52-332 (451)
301 PRK04311 selenocysteine syntha 99.6 4.4E-14 9.4E-19 142.2 23.4 246 123-387 98-376 (464)
302 PRK07481 hypothetical protein; 99.6 1.3E-13 2.7E-18 139.5 26.7 311 109-430 42-415 (449)
303 PLN03032 serine decarboxylase; 99.6 1.4E-13 3.1E-18 134.9 26.1 243 148-401 64-329 (374)
304 PRK12403 putative aminotransfe 99.6 2.4E-13 5.2E-18 137.8 28.6 244 109-361 54-342 (460)
305 PRK05639 4-aminobutyrate amino 99.6 1.9E-13 4.1E-18 138.3 27.8 309 108-430 52-410 (457)
306 PRK06082 4-aminobutyrate amino 99.6 1.5E-13 3.2E-18 139.2 27.0 309 108-430 71-420 (459)
307 KOG1359 Glycine C-acetyltransf 99.6 3.2E-14 7E-19 128.7 19.4 291 110-429 68-373 (417)
308 PRK06943 adenosylmethionine--8 99.6 1.4E-13 3E-18 139.2 26.5 310 108-430 53-416 (453)
309 PRK05613 O-acetylhomoserine am 99.6 4.5E-14 9.7E-19 141.6 22.6 155 149-328 72-231 (437)
310 PRK07483 hypothetical protein; 99.6 2E-13 4.4E-18 137.7 26.5 309 109-430 30-399 (443)
311 PRK07036 hypothetical protein; 99.6 1.8E-13 3.9E-18 138.8 26.2 312 108-430 50-422 (466)
312 PRK06173 adenosylmethionine--8 99.6 1.1E-13 2.5E-18 138.9 24.4 308 108-430 43-395 (429)
313 PRK09221 beta alanine--pyruvat 99.6 1.3E-13 2.8E-18 139.1 24.9 310 108-430 48-413 (445)
314 PRK13360 omega amino acid--pyr 99.6 2.2E-13 4.7E-18 137.4 26.4 310 108-430 45-410 (442)
315 PF01212 Beta_elim_lyase: Beta 99.6 1.2E-15 2.5E-20 144.7 8.5 252 123-393 7-276 (290)
316 PRK07480 putative aminotransfe 99.6 1.5E-13 3.2E-18 139.1 24.2 246 108-361 49-339 (456)
317 PRK07030 adenosylmethionine--8 99.6 4.1E-13 8.9E-18 136.1 27.4 308 109-429 47-415 (466)
318 PRK05630 adenosylmethionine--8 99.6 4.6E-13 9.9E-18 134.3 26.5 306 109-430 40-390 (422)
319 PRK08742 adenosylmethionine--8 99.6 3.2E-13 7E-18 136.9 25.3 247 108-361 63-359 (472)
320 KOG2862 Alanine-glyoxylate ami 99.6 7.1E-13 1.5E-17 121.1 24.6 289 126-430 27-346 (385)
321 TIGR00474 selA seryl-tRNA(sec) 99.6 2.3E-13 4.9E-18 136.7 23.8 197 123-338 93-310 (454)
322 PRK06931 diaminobutyrate--2-ox 99.6 5.2E-13 1.1E-17 135.3 25.8 314 108-430 57-421 (459)
323 PF04864 Alliinase_C: Allinase 99.6 2.5E-14 5.3E-19 133.4 14.8 295 112-434 1-335 (363)
324 COG0626 MetC Cystathionine bet 99.6 2.6E-13 5.7E-18 132.1 22.4 209 149-387 66-282 (396)
325 TIGR00508 bioA adenosylmethion 99.6 1E-12 2.2E-17 132.2 27.2 308 108-430 44-396 (427)
326 PRK06916 adenosylmethionine--8 99.6 1E-12 2.2E-17 133.3 26.2 309 109-430 56-425 (460)
327 PRK15029 arginine decarboxylas 99.6 8.8E-13 1.9E-17 138.4 26.2 189 148-350 207-425 (755)
328 KOG0053 Cystathionine beta-lya 99.6 2.6E-13 5.5E-18 130.6 20.1 185 150-360 81-271 (409)
329 cd00611 PSAT_like Phosphoserin 99.6 3.7E-13 8E-18 132.5 21.4 241 122-389 9-281 (355)
330 PRK06434 cystathionine gamma-l 99.6 3.7E-13 8E-18 132.8 21.3 204 149-387 67-278 (384)
331 PRK06149 hypothetical protein; 99.6 6.4E-13 1.4E-17 146.0 25.2 308 108-430 584-937 (972)
332 PRK06148 hypothetical protein; 99.6 6.6E-13 1.4E-17 146.1 25.2 309 108-430 623-977 (1013)
333 COG0076 GadB Glutamate decarbo 99.6 2E-12 4.3E-17 129.8 26.3 274 122-404 73-379 (460)
334 TIGR01364 serC_1 phosphoserine 99.6 2.2E-12 4.7E-17 126.4 25.8 281 124-431 4-316 (349)
335 COG0161 BioA Adenosylmethionin 99.6 1.1E-12 2.4E-17 128.6 23.5 296 124-430 62-413 (449)
336 PF06838 Met_gamma_lyase: Meth 99.5 2.5E-13 5.5E-18 127.5 17.3 225 152-394 56-303 (403)
337 PF00202 Aminotran_3: Aminotra 99.5 9E-14 2E-18 135.7 15.0 243 110-361 17-292 (339)
338 PRK05355 3-phosphoserine/phosp 99.5 1.5E-12 3.3E-17 128.0 23.7 286 122-431 13-326 (360)
339 PRK03080 phosphoserine aminotr 99.5 1.3E-12 2.7E-17 129.8 22.1 291 111-431 13-339 (378)
340 PRK06209 glutamate-1-semialdeh 99.5 2.2E-12 4.7E-17 130.0 22.8 297 108-429 47-380 (431)
341 PRK08297 L-lysine aminotransfe 99.5 5.6E-12 1.2E-16 127.3 25.3 309 108-431 44-411 (443)
342 KOG1401 Acetylornithine aminot 99.5 4.1E-12 8.9E-17 120.5 22.4 270 108-387 55-352 (433)
343 PLN02263 serine decarboxylase 99.5 5.1E-11 1.1E-15 118.9 29.9 247 147-401 130-396 (470)
344 PLN02974 adenosylmethionine-8- 99.5 1E-11 2.2E-16 132.4 24.8 311 110-429 366-787 (817)
345 TIGR00461 gcvP glycine dehydro 99.5 1.9E-11 4.1E-16 130.4 25.8 271 139-426 516-829 (939)
346 TIGR03251 LAT_fam L-lysine 6-t 99.5 8.5E-12 1.9E-16 125.7 22.2 308 109-431 38-404 (431)
347 KOG1357 Serine palmitoyltransf 99.5 2.6E-12 5.6E-17 122.9 17.0 261 147-428 179-462 (519)
348 KOG1404 Alanine-glyoxylate ami 99.5 1.9E-11 4.2E-16 115.2 22.4 294 124-433 68-408 (442)
349 COG2873 MET17 O-acetylhomoseri 99.5 5.4E-12 1.2E-16 118.4 18.6 155 149-329 65-223 (426)
350 TIGR02617 tnaA_trp_ase tryptop 99.5 2.3E-11 5.1E-16 118.9 23.5 294 110-426 42-388 (467)
351 PRK15400 lysine decarboxylase 99.5 1.3E-11 2.7E-16 128.5 22.9 221 148-386 197-441 (714)
352 PRK13578 ornithine decarboxyla 99.4 2.1E-11 4.6E-16 126.9 24.1 169 148-331 176-371 (720)
353 TIGR00699 GABAtrns_euk 4-amino 99.4 1.2E-11 2.6E-16 124.7 21.6 304 108-430 57-435 (464)
354 TIGR01365 serC_2 phosphoserine 99.4 2.5E-11 5.5E-16 119.1 22.8 260 148-432 37-340 (374)
355 PLN02880 tyrosine decarboxylas 99.4 1.1E-10 2.4E-15 119.0 27.5 296 126-429 98-448 (490)
356 PLN02590 probable tyrosine dec 99.4 3.2E-10 7E-15 115.9 29.9 295 126-428 146-495 (539)
357 PRK15399 lysine decarboxylase 99.4 1.3E-10 2.9E-15 120.9 25.2 186 148-350 197-403 (713)
358 PRK05367 glycine dehydrogenase 99.4 1.1E-10 2.3E-15 126.6 25.3 267 146-428 538-839 (954)
359 COG1103 Archaea-specific pyrid 99.4 7.8E-11 1.7E-15 105.9 19.6 171 148-338 63-241 (382)
360 PRK12566 glycine dehydrogenase 99.3 3.6E-10 7.7E-15 120.1 26.0 299 111-427 502-839 (954)
361 COG1982 LdcC Arginine/lysine/o 99.3 3.7E-10 8.1E-15 113.2 24.5 264 148-428 72-373 (557)
362 TIGR03799 NOD_PanD_pyr putativ 99.3 7.2E-10 1.6E-14 113.5 26.9 263 131-400 110-434 (522)
363 TIGR01366 serC_3 phosphoserine 99.3 1.8E-10 4E-15 113.5 21.9 251 149-431 44-326 (361)
364 PLN02452 phosphoserine transam 99.3 1.2E-09 2.7E-14 107.1 26.2 294 110-432 7-332 (365)
365 COG4100 Cystathionine beta-lya 99.3 3E-10 6.5E-15 103.6 19.4 175 152-337 67-257 (416)
366 KOG1402 Ornithine aminotransfe 99.3 1.3E-10 2.9E-15 107.1 15.3 281 124-430 77-396 (427)
367 PLN02994 1-aminocyclopropane-1 99.3 1.3E-11 2.7E-16 105.6 7.4 82 119-206 70-153 (153)
368 PF00282 Pyridoxal_deC: Pyrido 99.2 1.2E-09 2.7E-14 107.7 21.8 267 126-400 55-369 (373)
369 PRK12462 phosphoserine aminotr 99.2 6.2E-09 1.3E-13 101.3 24.7 292 110-431 4-330 (364)
370 COG1921 SelA Selenocysteine sy 99.2 3.8E-09 8.3E-14 101.6 21.9 221 124-361 40-268 (395)
371 KOG1358 Serine palmitoyltransf 99.1 1.7E-09 3.6E-14 102.2 15.7 300 107-429 92-423 (467)
372 PLN02414 glycine dehydrogenase 99.1 1.8E-08 3.9E-13 109.2 25.5 279 114-428 108-436 (993)
373 PRK05367 glycine dehydrogenase 99.1 2.8E-08 6E-13 108.1 25.8 281 114-427 81-408 (954)
374 PF03841 SelA: L-seryl-tRNA se 99.0 1E-09 2.2E-14 104.7 7.5 210 169-387 62-296 (367)
375 COG3033 TnaA Tryptophanase [Am 99.0 4.9E-08 1.1E-12 91.5 18.3 285 130-429 63-394 (471)
376 COG1003 GcvP Glycine cleavage 99.0 8.7E-08 1.9E-12 92.1 19.4 300 109-426 66-407 (496)
377 TIGR03811 tyr_de_CO2_Ent tyros 98.9 1.6E-06 3.4E-11 90.1 28.5 278 139-422 112-522 (608)
378 KOG1403 Predicted alanine-glyo 98.9 5.3E-08 1.1E-12 89.1 14.1 251 172-429 104-403 (452)
379 COG0403 GcvP Glycine cleavage 98.9 2.5E-06 5.4E-11 82.3 25.7 262 114-399 80-390 (450)
380 TIGR00461 gcvP glycine dehydro 98.9 8.7E-07 1.9E-11 95.3 25.2 283 115-429 70-399 (939)
381 KOG1383 Glutamate decarboxylas 98.9 6.8E-07 1.5E-11 86.8 21.8 268 147-427 117-410 (491)
382 COG3844 Kynureninase [Amino ac 98.8 9.3E-07 2E-11 82.1 20.6 287 110-426 31-366 (407)
383 KOG2467 Glycine/serine hydroxy 98.8 7.1E-07 1.5E-11 84.0 19.6 243 172-429 109-381 (477)
384 PF02347 GDC-P: Glycine cleava 98.7 1.4E-06 2.9E-11 86.2 17.3 224 140-387 95-364 (429)
385 PRK12566 glycine dehydrogenase 98.4 0.00017 3.6E-09 77.7 25.8 282 113-428 83-411 (954)
386 PF05889 SLA_LP_auto_ag: Solub 98.3 5.5E-05 1.2E-09 73.3 18.3 182 150-340 56-249 (389)
387 COG1932 SerC Phosphoserine ami 98.0 0.00047 1E-08 65.8 17.3 295 110-430 5-330 (365)
388 KOG0629 Glutamate decarboxylas 97.9 0.00024 5.2E-09 68.6 12.7 244 140-388 131-414 (510)
389 KOG1405 4-aminobutyrate aminot 97.7 0.00068 1.5E-08 64.0 13.2 181 231-427 254-449 (484)
390 KOG0628 Aromatic-L-amino-acid/ 97.5 0.0012 2.6E-08 64.5 12.4 147 140-289 103-279 (511)
391 PLN02672 methionine S-methyltr 96.9 0.036 7.9E-07 61.4 17.3 213 129-353 408-640 (1082)
392 KOG3843 Predicted serine hydro 96.5 0.02 4.3E-07 52.3 9.4 192 162-362 69-271 (432)
393 KOG2040 Glycine dehydrogenase 96.1 0.28 6.1E-06 50.5 15.7 269 140-426 569-880 (1001)
394 KOG2040 Glycine dehydrogenase 95.4 1.3 2.8E-05 45.9 17.5 279 114-422 123-445 (1001)
395 KOG2790 Phosphoserine aminotra 95.0 1.1 2.3E-05 41.9 14.1 251 150-422 52-328 (370)
396 KOG3846 L-kynurenine hydrolase 92.2 1.8 3.9E-05 40.8 10.6 114 169-286 128-255 (465)
397 PF05368 NmrA: NmrA-like famil 87.4 4.7 0.0001 36.8 9.6 97 174-280 2-99 (233)
398 COG2102 Predicted ATPases of P 84.7 13 0.00028 33.6 10.4 100 172-280 3-117 (223)
399 KOG1201 Hydroxysteroid 17-beta 79.7 23 0.0005 33.6 10.5 139 167-320 36-182 (300)
400 COG0031 CysK Cysteine synthase 77.2 29 0.00062 33.2 10.5 92 167-258 59-155 (300)
401 PRK10595 SOS cell division inh 76.6 36 0.00079 29.3 10.0 105 172-280 30-139 (164)
402 TIGR00290 MJ0570_dom MJ0570-re 75.6 35 0.00077 31.1 10.3 99 173-280 4-116 (223)
403 PF13460 NAD_binding_10: NADH( 75.1 14 0.00031 31.9 7.7 90 173-276 1-90 (183)
404 TIGR00623 sula cell division i 74.5 32 0.00069 29.8 9.1 89 187-280 53-143 (168)
405 KOG1465 Translation initiation 73.6 50 0.0011 31.3 10.7 129 172-317 164-298 (353)
406 PRK08265 short chain dehydroge 70.8 57 0.0012 30.1 11.1 94 172-269 8-108 (261)
407 COG0296 GlgB 1,4-alpha-glucan 69.2 6.8 0.00015 41.3 4.6 43 245-290 200-242 (628)
408 PRK05678 succinyl-CoA syntheta 68.7 15 0.00032 35.0 6.5 75 199-284 49-125 (291)
409 PF02662 FlpD: Methyl-viologen 68.1 19 0.00041 29.5 6.2 57 216-275 29-90 (124)
410 COG0552 FtsY Signal recognitio 68.0 20 0.00043 34.6 7.1 107 176-285 149-270 (340)
411 COG1105 FruK Fructose-1-phosph 67.1 62 0.0014 31.1 10.3 58 227-287 108-171 (310)
412 COG1091 RfbD dTDP-4-dehydrorha 66.1 59 0.0013 30.8 9.8 102 231-336 38-162 (281)
413 PRK04296 thymidine kinase; Pro 66.0 21 0.00046 31.5 6.7 94 181-286 18-117 (190)
414 TIGR00289 conserved hypothetic 66.0 85 0.0018 28.6 10.6 99 173-280 4-116 (222)
415 PLN02955 8-amino-7-oxononanoat 65.5 97 0.0021 31.8 12.0 137 139-286 109-261 (476)
416 COG1648 CysG Siroheme synthase 64.4 54 0.0012 29.6 8.9 87 172-279 14-101 (210)
417 PF10087 DUF2325: Uncharacteri 63.5 67 0.0014 24.8 9.6 71 202-280 10-80 (97)
418 COG1184 GCD2 Translation initi 63.4 95 0.0021 29.7 10.6 93 172-280 121-226 (301)
419 cd01422 MGS Methylglyoxal synt 62.4 47 0.001 26.7 7.5 63 214-280 44-106 (115)
420 PRK12447 histidinol dehydrogen 62.3 3.7 8E-05 40.9 1.1 35 11-45 358-392 (426)
421 PRK13769 histidinol dehydrogen 62.1 4.4 9.6E-05 39.5 1.6 33 10-42 311-343 (368)
422 TIGR00069 hisD histidinol dehy 62.0 3.7 8.1E-05 40.4 1.1 35 11-45 332-366 (393)
423 PRK13770 histidinol dehydrogen 61.8 3.9 8.4E-05 40.6 1.2 35 11-45 353-387 (416)
424 PF01902 ATP_bind_4: ATP-bindi 61.7 1.1E+02 0.0024 27.7 10.5 100 172-280 3-116 (218)
425 TIGR03573 WbuX N-acetyl sugar 61.3 81 0.0018 30.8 10.3 105 172-289 62-174 (343)
426 PRK06194 hypothetical protein; 61.1 1.1E+02 0.0024 28.4 11.2 92 172-267 8-110 (287)
427 cd06568 GH20_SpHex_like A subg 59.8 22 0.00047 34.6 6.0 70 207-280 23-93 (329)
428 KOG2741 Dimeric dihydrodiol de 59.5 27 0.00059 33.8 6.3 69 203-280 60-128 (351)
429 TIGR01019 sucCoAalpha succinyl 59.5 26 0.00057 33.3 6.3 75 199-284 47-123 (286)
430 TIGR00064 ftsY signal recognit 59.2 44 0.00096 31.5 7.8 98 181-284 87-202 (272)
431 PLN02926 histidinol dehydrogen 58.7 4.7 0.0001 40.2 1.2 35 11-45 366-400 (431)
432 PRK06483 dihydromonapterin red 58.5 96 0.0021 27.9 9.9 48 172-219 4-51 (236)
433 COG0505 CarA Carbamoylphosphat 58.3 33 0.00072 33.3 6.7 70 192-272 177-248 (368)
434 PRK12936 3-ketoacyl-(acyl-carr 58.2 1.4E+02 0.003 26.8 10.9 92 172-267 8-107 (245)
435 smart00642 Aamy Alpha-amylase 58.0 33 0.00072 29.6 6.3 28 260-287 68-95 (166)
436 cd06572 Histidinol_dh Histidin 58.0 4.5 9.9E-05 39.9 0.9 36 10-45 335-370 (390)
437 TIGR01470 cysG_Nterm siroheme 58.0 1.4E+02 0.0031 26.7 10.7 92 172-283 11-103 (205)
438 PRK00877 hisD bifunctional his 57.8 4.9 0.00011 40.1 1.1 36 10-45 362-397 (425)
439 PF00815 Histidinol_dh: Histid 57.5 5.1 0.00011 39.8 1.2 35 11-45 349-383 (412)
440 KOG1200 Mitochondrial/plastidi 57.4 72 0.0016 28.5 8.0 108 173-282 17-131 (256)
441 KOG1467 Translation initiation 56.2 1.1E+02 0.0024 31.1 10.0 131 145-285 324-472 (556)
442 PF01408 GFO_IDH_MocA: Oxidore 56.0 28 0.0006 27.7 5.2 22 259-280 97-118 (120)
443 PRK07063 short chain dehydroge 55.2 1.7E+02 0.0036 26.7 11.2 93 172-268 9-114 (260)
444 cd02742 GH20_hexosaminidase Be 55.1 26 0.00057 33.6 5.6 69 207-280 21-90 (303)
445 PRK10785 maltodextrin glucosid 55.0 36 0.00079 36.1 7.1 29 260-288 224-252 (598)
446 PF14258 DUF4350: Domain of un 54.9 75 0.0016 22.6 7.3 61 206-281 9-70 (70)
447 PLN00011 cysteine synthase 54.6 1.9E+02 0.0041 27.9 11.6 52 172-223 71-123 (323)
448 PRK06463 fabG 3-ketoacyl-(acyl 54.3 1.6E+02 0.0034 26.9 10.7 29 172-200 9-37 (255)
449 COG2984 ABC-type uncharacteriz 54.0 2.1E+02 0.0046 27.6 11.4 142 122-282 42-195 (322)
450 PRK07060 short chain dehydroge 53.6 1.7E+02 0.0036 26.3 10.8 89 172-266 11-103 (245)
451 PLN03013 cysteine synthase 53.1 1.7E+02 0.0036 29.6 11.1 78 145-223 149-229 (429)
452 cd06570 GH20_chitobiase-like_1 52.5 32 0.00069 33.2 5.7 63 207-280 23-86 (311)
453 PRK07067 sorbitol dehydrogenas 52.4 1.7E+02 0.0037 26.6 10.7 75 172-250 8-88 (257)
454 PRK05884 short chain dehydroge 52.0 1.1E+02 0.0025 27.4 9.1 71 173-249 3-76 (223)
455 COG1087 GalE UDP-glucose 4-epi 51.9 52 0.0011 31.5 6.7 96 172-280 2-114 (329)
456 PRK05867 short chain dehydroge 51.8 1.9E+02 0.0041 26.3 11.1 94 172-269 11-115 (253)
457 COG0826 Collagenase and relate 51.2 41 0.00088 33.0 6.3 7 275-281 94-100 (347)
458 PRK06500 short chain dehydroge 51.1 1.3E+02 0.0027 27.2 9.5 53 172-224 8-60 (249)
459 PLN02556 cysteine synthase/L-3 51.1 1.8E+02 0.0039 28.8 10.9 84 172-256 113-197 (368)
460 PRK12481 2-deoxy-D-gluconate 3 51.0 1.8E+02 0.0039 26.5 10.5 64 172-239 10-74 (251)
461 cd06562 GH20_HexA_HexB-like Be 50.8 27 0.00058 34.3 5.0 65 207-280 23-88 (348)
462 PRK08339 short chain dehydroge 50.5 2.1E+02 0.0045 26.4 11.0 93 172-269 10-114 (263)
463 TIGR03815 CpaE_hom_Actino heli 50.3 1E+02 0.0023 29.6 9.1 56 228-284 159-214 (322)
464 COG0352 ThiE Thiamine monophos 49.7 34 0.00073 30.9 5.1 91 232-331 24-115 (211)
465 PRK06182 short chain dehydroge 49.6 1.5E+02 0.0033 27.3 9.9 89 172-267 5-101 (273)
466 PRK06139 short chain dehydroge 49.4 2.1E+02 0.0045 27.7 11.0 94 172-269 9-113 (330)
467 PRK07424 bifunctional sterol d 49.3 2.1E+02 0.0045 28.8 11.1 92 172-269 180-271 (406)
468 COG0373 HemA Glutamyl-tRNA red 49.2 2.9E+02 0.0063 27.8 12.1 110 154-283 164-274 (414)
469 PF00106 adh_short: short chai 49.1 1.2E+02 0.0027 25.3 8.5 95 172-270 2-110 (167)
470 PRK05872 short chain dehydroge 49.1 2.1E+02 0.0046 26.9 10.9 93 172-268 11-113 (296)
471 PRK11761 cysM cysteine synthas 48.7 2.3E+02 0.0049 27.0 11.0 52 172-223 65-117 (296)
472 cd00532 MGS-like MGS-like doma 48.7 1.4E+02 0.0029 23.7 9.0 68 211-282 38-106 (112)
473 PRK10076 pyruvate formate lyas 47.9 2.1E+02 0.0046 25.8 11.4 22 259-280 190-211 (213)
474 cd00951 KDGDH 5-dehydro-4-deox 47.8 69 0.0015 30.4 7.2 54 226-280 14-74 (289)
475 PLN02565 cysteine synthase 46.4 2.5E+02 0.0054 27.1 10.9 81 141-222 37-120 (322)
476 TIGR01137 cysta_beta cystathio 46.1 1.8E+02 0.0039 29.4 10.5 76 147-223 39-116 (454)
477 PRK07231 fabG 3-ketoacyl-(acyl 46.1 2.2E+02 0.0048 25.5 10.6 76 172-251 7-90 (251)
478 PRK05876 short chain dehydroge 46.1 2.5E+02 0.0054 26.1 11.0 93 172-268 8-111 (275)
479 PRK08057 cobalt-precorrin-6x r 45.6 90 0.002 29.0 7.4 91 172-280 4-97 (248)
480 PRK08263 short chain dehydroge 45.5 2.1E+02 0.0045 26.5 10.1 91 172-266 5-103 (275)
481 PRK06935 2-deoxy-D-gluconate 3 45.3 2.3E+02 0.0051 25.7 10.4 74 172-249 17-98 (258)
482 TIGR03249 KdgD 5-dehydro-4-deo 45.3 84 0.0018 29.9 7.4 47 226-273 19-69 (296)
483 PRK07478 short chain dehydroge 45.2 2.4E+02 0.0051 25.6 10.5 94 172-269 8-113 (254)
484 TIGR03649 ergot_EASG ergot alk 44.9 1E+02 0.0022 28.8 7.9 88 173-276 2-97 (285)
485 PRK05096 guanosine 5'-monophos 44.3 1.1E+02 0.0023 29.8 7.7 111 172-283 98-221 (346)
486 PRK07825 short chain dehydroge 44.0 2.5E+02 0.0053 25.8 10.4 44 172-215 7-50 (273)
487 PF02571 CbiJ: Precorrin-6x re 44.0 79 0.0017 29.4 6.7 94 172-280 2-98 (249)
488 PF05621 TniB: Bacterial TniB 43.9 2E+02 0.0043 27.6 9.4 176 177-363 72-274 (302)
489 TIGR01138 cysM cysteine syntha 43.8 2.4E+02 0.0052 26.7 10.3 77 146-223 35-113 (290)
490 PRK08589 short chain dehydroge 43.6 2.7E+02 0.0058 25.7 10.9 52 172-224 8-62 (272)
491 cd00408 DHDPS-like Dihydrodipi 43.4 66 0.0014 30.2 6.3 46 227-273 12-61 (281)
492 PRK03620 5-dehydro-4-deoxygluc 43.3 89 0.0019 29.9 7.3 54 226-280 21-81 (303)
493 COG0300 DltE Short-chain dehyd 43.0 2.3E+02 0.005 26.6 9.6 96 172-269 8-113 (265)
494 KOG0023 Alcohol dehydrogenase, 43.0 3E+02 0.0064 26.8 10.2 98 182-279 193-325 (360)
495 KOG2697 Histidinol dehydrogena 43.0 5 0.00011 37.6 -1.3 34 12-45 376-409 (446)
496 PRK05717 oxidoreductase; Valid 42.9 2.6E+02 0.0056 25.4 11.0 53 172-224 12-64 (255)
497 PF01073 3Beta_HSD: 3-beta hyd 42.7 1.3E+02 0.0028 28.4 8.2 96 175-278 2-110 (280)
498 TIGR00683 nanA N-acetylneurami 42.2 96 0.0021 29.5 7.3 48 226-274 14-66 (290)
499 COG0141 HisD Histidinol dehydr 41.7 5.7 0.00012 39.4 -1.2 32 12-43 360-391 (425)
500 PRK06372 translation initiatio 41.5 2.6E+02 0.0056 26.1 9.6 98 172-280 88-190 (253)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.4e-61 Score=472.95 Aligned_cols=324 Identities=39% Similarity=0.738 Sum_probs=302.9
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
.++|||++|+|++++|+.+.+++.+++.++...|.+..|+++||+++++++.+.+|..++++++|++|+|+++++..++.
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~ 107 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFL 107 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHH
Confidence 37999999999999999999999999988644777999999999999999999999999998569999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC--CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP--PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~--~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
++++|||+|++++|.|+.|...+..+|++++.++++. .+|.+|++.+++++++++|+|++++||||||.+++++++++
T Consensus 108 a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~ 187 (393)
T COG0436 108 ALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKA 187 (393)
T ss_pred HhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHH
Confidence 9999999999999999999999999999999999864 37999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhhccc
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLT 344 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~ 344 (434)
|+++|++||++||.||+|.+|.|++. +.++..+.+..+++|.++||||.++|+|||+||++++ +++++.+.+++....
T Consensus 188 i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~~ 267 (393)
T COG0436 188 IVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYLT 267 (393)
T ss_pred HHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhcc
Confidence 99999999999999999999999984 7777777665689999999999999999999999999 889999999999999
Q ss_pred cCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhC-CCEeec-CCeeEEEeeecCCCCCCCHHHHHHHHH
Q 013883 345 FATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAV-GFKVFP-SSGTYFVVVDHTPFGHETDIAFCEYLI 420 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ll 420 (434)
++++.+.|.++..+|+.. .++++.+++.|++||+.+.+.|.+. ||.+.. ++|+||+|++++.. .++.+|+.+|+
T Consensus 268 ~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~--~d~~~f~~~Ll 345 (393)
T COG0436 268 SCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL--LDSEEFAKKLL 345 (393)
T ss_pred cCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC--CCHHHHHHHHH
Confidence 999999999999999987 3588889999999999999999987 599988 89999999998654 47899999999
Q ss_pred HhcCeEEECCCCCC
Q 013883 421 KEVGVVAIPTSVFY 434 (434)
Q Consensus 421 ~~~GV~v~pG~~F~ 434 (434)
+++||.|+||+.|+
T Consensus 346 ~~~gV~v~PG~~Fg 359 (393)
T COG0436 346 EEAGVAVVPGSGFG 359 (393)
T ss_pred HhCCEEEecccccC
Confidence 99999999999995
No 2
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=7.2e-60 Score=443.47 Aligned_cols=345 Identities=46% Similarity=0.810 Sum_probs=317.3
Q ss_pred HhhhccccHHHHHHHHhhcCCeeE-eCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCC
Q 013883 90 RLEKFKTTIFTQMSMLAIKHGAIN-LGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEV 167 (434)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~i~-l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~ 167 (434)
+++.....++.++.+++...+..+ |++|.|++++|+.+.+++++++.+. .++|.+.+|+++|+++|++.+...+|..+
T Consensus 11 ~l~~~~~~vw~e~~~la~e~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~ 90 (420)
T KOG0257|consen 11 NLSTSKPYVWTEINRLAAEHKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLL 90 (420)
T ss_pred cccccCCcHHHHHHHHHHhcCCCCcccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhcccc
Confidence 344445567778888877777778 9999999999999999999999885 78999999999999999999999999999
Q ss_pred CCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC-------CCCCCCCHHHHHhhcc
Q 013883 168 DPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR-------PPDFAIPIEELKSTIS 240 (434)
Q Consensus 168 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-------~~~~~~d~~~l~~~i~ 240 (434)
+++++|++|.|+.+++..++++++++||+|++.+|.|..|...+.++|..++.|+.. .++|.+|++.++.+++
T Consensus 91 ~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t 170 (420)
T KOG0257|consen 91 DPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT 170 (420)
T ss_pred CCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc
Confidence 998899999999999999999999999999999999999999999999999999988 4679999999999999
Q ss_pred cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccc
Q 013883 241 KNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 241 ~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
++||+|++|+||||||.++++|++++|+++|++||+++|.||+|..+.|++. +..+..+++++++++.++||+|+||++
T Consensus 171 ~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~T 250 (420)
T KOG0257|consen 171 EKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVT 250 (420)
T ss_pred CCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeee
Confidence 9999999999999999999999999999999999999999999999999985 788999999999999999999999999
Q ss_pred cceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCCh--------HHHHHHHHHHHHHHHHHHHHhhhCCCEe
Q 013883 320 GWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPE--------TYYEELKRDYSAKKAILVEGLNAVGFKV 391 (434)
Q Consensus 320 G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~--------~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 391 (434)
|||+||+++++.+...++.++....+..+++.|.|.++++.... .+..++...|+++|+.|.+.|.++|+++
T Consensus 251 GWrlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v 330 (420)
T KOG0257|consen 251 GWRLGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKV 330 (420)
T ss_pred eeeeeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999988887643 4456699999999999999999999999
Q ss_pred ecCCeeEEEeeecC-----CC--C---CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 392 FPSSGTYFVVVDHT-----PF--G---HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 392 ~~~~~~~~~~~~~~-----~~--~---~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
..++|++|+|++++ ++ + ..++..++..|+++.||.+.|++.||
T Consensus 331 ~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~ 383 (420)
T KOG0257|consen 331 TGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFG 383 (420)
T ss_pred ccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcC
Confidence 99999999999987 11 1 11456789999999999999999998
No 3
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=6.3e-57 Score=451.25 Aligned_cols=353 Identities=88% Similarity=1.358 Sum_probs=320.9
Q ss_pred CCchHHHHHhhhccccHHHHHHHHhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHh
Q 013883 82 LQPQQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKK 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 161 (434)
...+.+.+++...+...+..+......++.|||+.|.|++++++.+.+++.+++.++...|++..|.++||+++++++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~ 106 (413)
T PLN00175 27 QQPLQVAKRLEKFKTTIFTQMSSLAIKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKK 106 (413)
T ss_pred CcccchhHHhhcCCCCHHHHHHHHhhcCCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 44455677777777777888877777789999999999999999999999998887667899999999999999999999
Q ss_pred hcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc
Q 013883 162 DSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK 241 (434)
Q Consensus 162 ~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~ 241 (434)
.+|.+++++++|++|+|+++++.+++.+++++||+|++++|+|..|...++..|++++.++++++++++|++.+++.+.+
T Consensus 107 ~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~ 186 (413)
T PLN00175 107 DTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTS 186 (413)
T ss_pred HhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCc
Confidence 99998988756999999999999999999999999999999999999999999999999999876789999999999988
Q ss_pred CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccc
Q 013883 242 NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGW 321 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~ 321 (434)
++++|++++||||||.+++.+++++|+++|++|+++||+||+|.++.|++.+.++..+.+..+++|+++||||.|+++|+
T Consensus 187 ~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~ 266 (413)
T PLN00175 187 KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGW 266 (413)
T ss_pred CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcch
Confidence 99999999999999999999999999999999999999999999999876656666666556899999999999999999
Q ss_pred eeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEe
Q 013883 322 KIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVV 401 (434)
Q Consensus 322 R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 401 (434)
|+||+++++++++.+...+....++.+.+.|.++..+|++.+.+++++++.|+++++.+.+.|++.|+.+.+++|+||+|
T Consensus 267 RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~~f~~ 346 (413)
T PLN00175 267 KIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGTYFVM 346 (413)
T ss_pred heeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEE
Confidence 99999999999999998888778999999999999999887788999999999999999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 402 VDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 402 ~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+++.+.+..++.+++++|++++||.+.||+.||
T Consensus 347 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~ 379 (413)
T PLN00175 347 VDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFY 379 (413)
T ss_pred EeccccCCCCHHHHHHHHHHhCCEEEeCchHhC
Confidence 997554544578999999988899999999885
No 4
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-52 Score=412.93 Aligned_cols=344 Identities=29% Similarity=0.558 Sum_probs=299.7
Q ss_pred HHhhhccccHHHHHHHHh-hcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC
Q 013883 89 KRLEKFKTTIFTQMSMLA-IKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEV 167 (434)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~ 167 (434)
+++.........++.... ..++.|||+.|.|++++++.+.+.+..........|++..|.++||+++++++.+.+|..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~ 87 (384)
T PRK06348 8 KKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSF 87 (384)
T ss_pred HHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Confidence 334344444444444433 2357899999999998888877766666555567899999999999999999998899999
Q ss_pred CCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEE
Q 013883 168 DPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAI 246 (434)
Q Consensus 168 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i 246 (434)
+++ +|++|+|+++++..++.+++++||+|++++|+|..+...+...|++++.+++++ +++.+|++.+++++++++++|
T Consensus 88 ~~~-~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 166 (384)
T PRK06348 88 KRN-EIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAI 166 (384)
T ss_pred Chh-hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEE
Confidence 998 899999999999999999999999999999999999999999999999998753 467899999999998899999
Q ss_pred EecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeE
Q 013883 247 LMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWA 326 (434)
Q Consensus 247 ~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~ 326 (434)
++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++...++..+.+..+++++++||||.+|++|+|+||+
T Consensus 167 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~ 246 (384)
T PRK06348 167 ILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYV 246 (384)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceee
Confidence 99999999999999999999999999999999999999999887655555566544689999999999999999999999
Q ss_pred EeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecC
Q 013883 327 IAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHT 405 (434)
Q Consensus 327 ~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 405 (434)
++++++++.+...+....++.+.+.|.++..+|.+.+++++++++.++++++.+.+.|++. ++.+.+++||||+|++++
T Consensus 247 v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~ 326 (384)
T PRK06348 247 IAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIK 326 (384)
T ss_pred ecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecc
Confidence 9999999999888877778899999999999998878889999999999999999999886 788889999999999985
Q ss_pred CCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 406 PFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 406 ~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
..+. ++.++++++++++||.+.||+.|+
T Consensus 327 ~~~~-~~~~l~~~l~~~~gv~v~pg~~f~ 354 (384)
T PRK06348 327 KTGL-SSVEFCEKLLKEAHVLVIPGKAFG 354 (384)
T ss_pred cCCC-CHHHHHHHHHHhCCEEEcCchhhc
Confidence 4333 578899999888899999999884
No 5
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=2.8e-52 Score=415.09 Aligned_cols=348 Identities=42% Similarity=0.740 Sum_probs=308.3
Q ss_pred HHHHhhhccccHHHHHHHHhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCC
Q 013883 87 VAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLE 166 (434)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~ 166 (434)
.+.++.+.+..++..+..+....++|+|+.|.|++++++.+.+++.+.+......|.+..|.++||+++++++.+.+|..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~ 87 (386)
T PRK09082 8 PQSKLPNVGTTIFTVMSALAAEHGAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQ 87 (386)
T ss_pred hhhHhhccCccHHHHHHHHHhhCCEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Confidence 34455555566666666655566899999999999988999999998887766789999999999999999999888988
Q ss_pred CCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEE
Q 013883 167 VDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAI 246 (434)
Q Consensus 167 ~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i 246 (434)
.+++++|++|+|+++++.+++..++++||+|++++|+|..+...++..|++++.++.+++++.+|++.+++.++++++++
T Consensus 88 ~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 167 (386)
T PRK09082 88 YDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLI 167 (386)
T ss_pred CCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEE
Confidence 77754799999999999999999999999999999999999999999999999999986678999999999998899999
Q ss_pred EecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeee
Q 013883 247 LMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGW 325 (434)
Q Consensus 247 ~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~ 325 (434)
++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..++..+.+..+++++++||||.+|++|+|+||
T Consensus 168 ~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ 247 (386)
T PRK09082 168 ILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGY 247 (386)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhh
Confidence 9999999999999999999999999999999999999999998653 445555655568999999999999999999999
Q ss_pred EEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecC
Q 013883 326 AIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHT 405 (434)
Q Consensus 326 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 405 (434)
+++++++++.+++......++++.+.|.++..+|+..++++++++..++++++.+.+.|++.|+.+.+++|+||+|++++
T Consensus 248 iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~ 327 (386)
T PRK09082 248 CVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQLVDYS 327 (386)
T ss_pred hhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeEEEEEecc
Confidence 99999999999988877788999999999999998557788999999999999999999999999999999999999986
Q ss_pred CCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 406 PFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 406 ~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+....++.+++++|++++||.+.||+.|+
T Consensus 328 ~~~~~~~~~~~~~l~~~~~v~v~pg~~f~ 356 (386)
T PRK09082 328 AISDLDDVEFCQWLTREHGVAAIPLSVFY 356 (386)
T ss_pred ccCCCCHHHHHHHHHHhCCEEEeCcHHhC
Confidence 43223578899998888999999999884
No 6
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=8.4e-52 Score=411.29 Aligned_cols=328 Identities=38% Similarity=0.682 Sum_probs=290.3
Q ss_pred hhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 106 AIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 106 ~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
....+.|+|+.|.|++++++.+.+++.+++.+....|++..|.++||+++++++.+.+|..++++++|++|+|+++++..
T Consensus 26 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~ 105 (384)
T PRK12414 26 AAQHDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYA 105 (384)
T ss_pred HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHH
Confidence 34457899999999999899999999888776667899999999999999999999889877763379999999999999
Q ss_pred HHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 186 TILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 186 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
++++++++||+|++++|+|..+...++..|++++.++++++++.+|++.+++++++++++|++++||||||.+++.++++
T Consensus 106 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~ 185 (384)
T PRK12414 106 AISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLA 185 (384)
T ss_pred HHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHH
Confidence 99999999999999999999999999999999999999866788999999999988999999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT 344 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~ 344 (434)
+|+++|++||++||+||+|.++.|++. ..++..+....+++++++||||.||++|+|+||+++++++++.+........
T Consensus 186 ~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~ 265 (384)
T PRK12414 186 RLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMV 265 (384)
T ss_pred HHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhhee
Confidence 999999999999999999999988763 2344444444578999999999999999999999999999999998887778
Q ss_pred cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcC
Q 013883 345 FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVG 424 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~G 424 (434)
++.+.+.|.++..+|+++.. ..++++.|+++++.+.+.|++.|+.+.+++|+||+|+++.+....++.+++.++++++|
T Consensus 266 ~~~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~g 344 (384)
T PRK12414 266 FSADTPMQHAFAEALAEPAS-YLGLGAFYQRKRDLLARELAGSRFELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDAR 344 (384)
T ss_pred cCCCcHHHHHHHHHhcCChH-HHHHHHHHHHHHHHHHHHHHhCCCeecCCCcceEEEEcccccCCCCHHHHHHHHHHhCC
Confidence 89999999999999987553 44678899999999999999999999999999999998754322246788878888889
Q ss_pred eEEECCCCCC
Q 013883 425 VVAIPTSVFY 434 (434)
Q Consensus 425 V~v~pG~~F~ 434 (434)
|.+.||+.|+
T Consensus 345 V~v~pg~~f~ 354 (384)
T PRK12414 345 VATIPLSAFY 354 (384)
T ss_pred EEEecchhhc
Confidence 9999999874
No 7
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=7.7e-52 Score=412.44 Aligned_cols=327 Identities=26% Similarity=0.424 Sum_probs=284.7
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
+.++|+|+.|.|++++++.+.+++.+.+.+. ...|++..|.++||+++++++.+.+|+.++++++|++|+|+++++.++
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~ 108 (388)
T PRK07366 29 GKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHL 108 (388)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHH
Confidence 4578999999999999999999998887643 467999999999999999999998999898874599999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+.+++++||+|++++|+|+.|...++..|++++.+|++++ ++.+|++.+++.+.+++++|++++||||||.+++.++++
T Consensus 109 ~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~ 188 (388)
T PRK07366 109 PLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQ 188 (388)
T ss_pred HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHH
Confidence 9999999999999999999999999999999999999853 477899999888877899999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCC--CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMD--HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 343 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~--~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~ 343 (434)
+|+++|++||++||+||+|.+|.+++. ..++..+....+++++++||||.||++|+|+||+++++++++++.+.+...
T Consensus 189 ~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~~~~ 268 (388)
T PRK07366 189 EAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAVV 268 (388)
T ss_pred HHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHHHhhc
Confidence 999999999999999999999998764 334555544456789999999999999999999999999999998888766
Q ss_pred ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhc
Q 013883 344 TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEV 423 (434)
Q Consensus 344 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~ 423 (434)
..+.....+.++..+|.+.+++++++++.++++++.+.+.|++.|+.+..+++++|+|+++++....++.+++++|++++
T Consensus 269 ~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~ 348 (388)
T PRK07366 269 DFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQT 348 (388)
T ss_pred ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCcccCCCHHHHHHHHHHhC
Confidence 66654545556666666557899999999999999999999999998888999999999986421124678888888888
Q ss_pred CeEEECCCCCC
Q 013883 424 GVVAIPTSVFY 434 (434)
Q Consensus 424 GV~v~pG~~F~ 434 (434)
||.+.||+.|+
T Consensus 349 gv~v~pg~~f~ 359 (388)
T PRK07366 349 GVAASPGSGFG 359 (388)
T ss_pred CEEEeCchHhC
Confidence 99999998873
No 8
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-51 Score=410.40 Aligned_cols=344 Identities=47% Similarity=0.843 Sum_probs=300.4
Q ss_pred hhhccccHHHHHHHHhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCC
Q 013883 91 LEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPE 170 (434)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~ 170 (434)
++..+...+..+......+++++|+.|.|+.+.++.+.+.+.+.+.+....|++..|.++||+++++++++.+|..++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~ 87 (387)
T PRK08912 8 FADLPTTIFEVMSQLAREHGAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPE 87 (387)
T ss_pred HhhCCCCHHHHHHHHHhhCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCc
Confidence 33334444444555455568999999999988788888888887766667899999999999999999998889888886
Q ss_pred CcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecC
Q 013883 171 KEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNT 250 (434)
Q Consensus 171 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~ 250 (434)
++|++|+|+++++.+++..++++||+|++++|+|+.+..+++..|++++.++++++++++|++.+++.++++++++++++
T Consensus 88 ~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~ 167 (387)
T PRK08912 88 TEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNN 167 (387)
T ss_pred ccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeC
Confidence 57999999999999999999999999999999999999999999999999999766789999999999988999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC-CCccccCCCCCCCceEEEccCChhhccccceeeeEEeC
Q 013883 251 PHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 251 p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
||||||.+++.+++++|+++|++||++||+||+|.++.+++ ...++..+.+..+++++++||||.||++|+|+||++++
T Consensus 168 p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~ 247 (387)
T PRK08912 168 PLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAA 247 (387)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecC
Confidence 99999999999999999999999999999999999998875 33445555444578999999999999999999999999
Q ss_pred hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCC-
Q 013883 330 PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFG- 408 (434)
Q Consensus 330 ~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~- 408 (434)
+++++.+........++.+...|.++..+|...++++++++++++++++.+.+.|++.|+.+.+++|+||+|+++++.+
T Consensus 248 ~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g~~~l~~~l~~~~~ 327 (387)
T PRK08912 248 PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQGTYFLTVDLAPLGL 327 (387)
T ss_pred HHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEecccccCC
Confidence 9999999887776677888888999988887767889999999999999999999999999999999999999986533
Q ss_pred CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 409 HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 409 ~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
..++.+++++|++++||.+.||..|+
T Consensus 328 ~~~~~~~~~~l~~~~gV~v~pg~~f~ 353 (387)
T PRK08912 328 AEDDVAFCRRLVEEAGVAAIPVSAFY 353 (387)
T ss_pred CCCHHHHHHHHHhcCCEEEecchhhC
Confidence 23577899998888899999999884
No 9
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=4.7e-51 Score=406.86 Aligned_cols=325 Identities=24% Similarity=0.444 Sum_probs=286.8
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
+++.|+|+.|.|+.+.++.+.+++.+++... ...|++..|.++||+++++++.+.+|.+++++++|++|+|+++++..+
T Consensus 31 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~ 110 (389)
T PRK08068 31 GHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVEL 110 (389)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHH
Confidence 4578999999999888888888888887653 467999999999999999999988898888864699999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+.+++++||+|++++|+|..|...++..|++++.+|++++ ++.+|++.+++.+.+++++|++++||||||.+++.++++
T Consensus 111 ~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~ 190 (389)
T PRK08068 111 PQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFE 190 (389)
T ss_pred HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHH
Confidence 9999999999999999999999999999999999999753 678899999999988899999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCC-CCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEM-DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT 344 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~ 344 (434)
+|+++|++||++||+||+|.++.+++ ...++....+..+++++++||||.||++|+|+||+++++++++.+........
T Consensus 191 ~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~~~ 270 (389)
T PRK08068 191 ETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDHLF 270 (389)
T ss_pred HHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhhcc
Confidence 99999999999999999999988865 23343333334568899999999999999999999999999999988877666
Q ss_pred cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcC
Q 013883 345 FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVG 424 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~G 424 (434)
.+.+.+.|.++..+|.+..+++++++++++++++.+.+.|++.|+.+.+++|++|+|+++++ + .++.+++++|++++|
T Consensus 271 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~g~~~~~v~~~~-~-~~~~~~~~~l~~~~g 348 (389)
T PRK08068 271 VSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGWEVDAPKGSFFAWMPVPK-G-YTSEQFADLLLEKAH 348 (389)
T ss_pred CCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCC-C-CCHHHHHHHHHHhCC
Confidence 66677788888888876678899999999999999999999999998899999999998853 2 257889999988789
Q ss_pred eEEECCCCCC
Q 013883 425 VVAIPTSVFY 434 (434)
Q Consensus 425 V~v~pG~~F~ 434 (434)
|.|.||+.|.
T Consensus 349 i~v~pg~~f~ 358 (389)
T PRK08068 349 VAVAPGNGFG 358 (389)
T ss_pred EEEecchHhC
Confidence 9999998773
No 10
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=5.5e-51 Score=405.00 Aligned_cols=324 Identities=31% Similarity=0.574 Sum_probs=291.3
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
++.|+|+.|.|++++++.+.+++.+++.+....|.+..|.++||+++++++++.+|..++++++|++|+|+++++.+++.
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 99 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMR 99 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 47899999999998888888888888776567799989999999999999999889888876479999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
+++++||+|++++|+|+.+...++..|.+++.++.+. +++++|++.+++++.++++++++++||||||.+++.+++++|
T Consensus 100 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l 179 (378)
T PRK07682 100 AIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEI 179 (378)
T ss_pred HhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHH
Confidence 9999999999999999999999999999999999864 368999999999998899999999999999999999999999
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~ 347 (434)
+++|++|++++|+||+|.++.+++...++..+.+..+++++++||||.||++|+|+||+++++++++.+........+++
T Consensus 180 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~~~ 259 (378)
T PRK07682 180 AVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMMCA 259 (378)
T ss_pred HHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhccCC
Confidence 99999999999999999999987654455555554578999999999999999999999999999999988776666788
Q ss_pred chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEE
Q 013883 348 STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v 427 (434)
+.+.|.++..+|++.+.+++++++.++++++.+.+.|++.|+.+.+++|+||+|+.+.+.+. ++.+++++|++++||.+
T Consensus 260 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~g~~~~~~~~~~~~~-~~~~~~~~ll~~~gv~v 338 (378)
T PRK07682 260 PTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGAFYAFPSISSTGL-SSEEFAEQLLLEEKVAV 338 (378)
T ss_pred CHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCeeEEEEEeccCCCC-CHHHHHHHHHHhCCEEE
Confidence 99999999999988767889999999999999999999999998899999999998754443 57789999887789999
Q ss_pred ECCCCC
Q 013883 428 IPTSVF 433 (434)
Q Consensus 428 ~pG~~F 433 (434)
.||..|
T Consensus 339 ~pg~~f 344 (378)
T PRK07682 339 VPGSVF 344 (378)
T ss_pred cCchhh
Confidence 999877
No 11
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-50 Score=404.72 Aligned_cols=323 Identities=27% Similarity=0.476 Sum_probs=288.2
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCC-CCcEEEcCChHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDP-EKEVTVTSGCTEAIAA 185 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~~i~~t~G~~~ai~~ 185 (434)
+++.|+|+.|.|++++++.+.+++.+.+.+. .+.|+ ..|.++||+++++++.+.+|..+++ + +|++|+|+++++..
T Consensus 31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~-~I~it~G~~~al~~ 108 (399)
T PRK07681 31 GHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADK-EVLLLMGSQDGLVH 108 (399)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCC-eEEECCCcHHHHHH
Confidence 4578999999999999999999988877642 34565 3799999999999999999999998 6 89999999999999
Q ss_pred HHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHH
Q 013883 186 TILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 186 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
++.+++++||+|++++|+|+.|...++..|++++.+|++++ ++.+|++.+++++.+++++|++++||||||.+++.+++
T Consensus 109 ~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~ 188 (399)
T PRK07681 109 LPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFF 188 (399)
T ss_pred HHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHH
Confidence 99999999999999999999999999999999999999754 57899999999998889999999999999999999999
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 343 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~ 343 (434)
++|+++|++||++||+||+|.++.+++. ..++..+....+++|+++||||.||++|+|+||+++++++++.+...+...
T Consensus 189 ~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~~~ 268 (399)
T PRK07681 189 KEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNT 268 (399)
T ss_pred HHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHHhhc
Confidence 9999999999999999999999988653 334455554557899999999999999999999999999999998887767
Q ss_pred ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhc
Q 013883 344 TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEV 423 (434)
Q Consensus 344 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~ 423 (434)
.++.+.+.|.++..+|++..+++++.++.++++++.+.+.|++.|+++..+++++|+|+++++ +. ++.+++.+|++++
T Consensus 269 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~g~f~~~~l~~-~~-~~~~~~~~l~~~~ 346 (399)
T PRK07681 269 DYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMFVWAEIPK-GW-TSLSFAYALMDRA 346 (399)
T ss_pred ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeeEEEEECCC-CC-CHHHHHHHHHHhC
Confidence 788999999999999998778899999999999999999999999988888999999999853 22 5778999999878
Q ss_pred CeEEECCCCCC
Q 013883 424 GVVAIPTSVFY 434 (434)
Q Consensus 424 GV~v~pG~~F~ 434 (434)
||.+.||+.|.
T Consensus 347 gv~v~pg~~f~ 357 (399)
T PRK07681 347 NVVVTPGHAFG 357 (399)
T ss_pred CEEEeCChhhC
Confidence 99999998773
No 12
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.3e-50 Score=403.40 Aligned_cols=344 Identities=49% Similarity=0.845 Sum_probs=301.5
Q ss_pred hhhccccHHHHHHHHhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCC
Q 013883 91 LEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPE 170 (434)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~ 170 (434)
+...+...+.++..+....+++||+.|.|+.+.++.+.+++.+.+......|++..|.++||+++++++.+.+|.+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~ 85 (387)
T PRK07777 6 LRPFGTTIFAEMSALAVRTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPD 85 (387)
T ss_pred hhhcCccHHHHHHHHHhhCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Confidence 34445555666666666678999999999988888788888887776667899999999999999999998899888776
Q ss_pred CcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC--CCCCCHHHHHhhcccCCcEEEe
Q 013883 171 KEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP--DFAIPIEELKSTISKNTRAILM 248 (434)
Q Consensus 171 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~--~~~~d~~~l~~~i~~~~~~i~~ 248 (434)
++|++|+|+++++.+++.+++++||+|+++.|+|..+...+...|.+++.++++++ ++.+|++.+++++++++++|++
T Consensus 86 ~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l 165 (387)
T PRK07777 86 TEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIV 165 (387)
T ss_pred CcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEE
Confidence 46999999999999999999999999999999999999999999999999999763 4779999999999889999999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEE
Q 013883 249 NTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAI 327 (434)
Q Consensus 249 ~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~ 327 (434)
++||||||.+++.+++++|+++|++|++++|+||+|.++.|++. +.++..+.+..+++++++||||.||++|+|+||++
T Consensus 166 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~ 245 (387)
T PRK07777 166 NSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWAC 245 (387)
T ss_pred cCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEe
Confidence 99999999999999999999999999999999999999988653 33455554446789999999999999999999999
Q ss_pred eChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCC
Q 013883 328 APPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF 407 (434)
Q Consensus 328 ~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 407 (434)
+++++++.+........++.+.+.|.++..+|...++|++++++.++++++.+.+.|++.|+++.+++|+||+|+++.+.
T Consensus 246 ~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~ 325 (387)
T PRK07777 246 GPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAGTYFLCADPRPL 325 (387)
T ss_pred cCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCcceEEEeccccc
Confidence 99999999988877667788889999999999877788999999999999999999999999999999999999987543
Q ss_pred CCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 408 GHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 408 ~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+..++.+++++|++++||.|.||+.|+
T Consensus 326 ~~~~~~~~~~~l~~~~gv~v~pg~~f~ 352 (387)
T PRK07777 326 GYDDGTEFCRALPERVGVAAIPMSVFY 352 (387)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchHhC
Confidence 333678999999888899999999874
No 13
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-50 Score=405.07 Aligned_cols=323 Identities=19% Similarity=0.312 Sum_probs=286.6
Q ss_pred CeeEeCCCCCC-CCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCC-CCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGFPN-FDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDP-EKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~p~-~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~~i~~t~G~~~ai~~~ 186 (434)
+.|+|+.|.|+ +++++.+.+++.+++... ...|++..|.++||+++++++.+.+|.++++ + +|++|+|+++++..+
T Consensus 40 ~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~-~I~it~Ga~~al~~~ 118 (405)
T PRK06207 40 RPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAAD-ELIITPGTQGALFLA 118 (405)
T ss_pred CceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-CEEEeCCcHHHHHHH
Confidence 67999999988 456778888888877653 4679999999999999999999999988888 6 899999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC----CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP----PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTRE 262 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~----~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e 262 (434)
+.+++++||+|++++|+|+.+...++..|++++.++++. .++++|++.+++++++++++|++++||||||.+++.+
T Consensus 119 ~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e 198 (405)
T PRK06207 119 VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAE 198 (405)
T ss_pred HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHH
Confidence 999999999999999999999999999999999999862 3588999999999988999999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhh
Q 013883 263 ELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS 341 (434)
Q Consensus 263 ~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~ 341 (434)
++++|+++|++||++||+||+|.++.|++. ..++..+....+++++++||||.|+++|+|+||+++++++++.++..+.
T Consensus 199 ~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~~~ 278 (405)
T PRK06207 199 EIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKLQA 278 (405)
T ss_pred HHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHHHh
Confidence 999999999999999999999999998764 3344444445689999999999999999999999999999999998887
Q ss_pred ccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHH
Q 013883 342 FLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLI 420 (434)
Q Consensus 342 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll 420 (434)
....+.+.+.|.++..+|++...++++.++.++++++.+.+.|++. |+.+.++++++|+|+++++.+. ++.+++++|+
T Consensus 279 ~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~-~~~~~~~~l~ 357 (405)
T PRK06207 279 IVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAV-SLHDFVKILR 357 (405)
T ss_pred HhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCC-CHHHHHHHHH
Confidence 7777888899999999998766678888888999999999999887 8888889999999999864333 4678999998
Q ss_pred HhcCeEEECCCCCC
Q 013883 421 KEVGVVAIPTSVFY 434 (434)
Q Consensus 421 ~~~GV~v~pG~~F~ 434 (434)
+++||.+.||+.|+
T Consensus 358 ~~~gV~v~pG~~F~ 371 (405)
T PRK06207 358 LQAGVIVTPGTEFS 371 (405)
T ss_pred HhcCEEEeCchHhC
Confidence 77899999999874
No 14
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=3.2e-50 Score=400.25 Aligned_cols=325 Identities=28% Similarity=0.498 Sum_probs=289.4
Q ss_pred hcCCeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 107 IKHGAINLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 107 ~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
.++++++|+.|.|++++++.+.+++.+++.. ....|++..|.++||+++++++.+.+|..++++++|++|+|+++++..
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~ 106 (383)
T TIGR03540 27 EGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAH 106 (383)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHH
Confidence 3458899999999998889999998887754 346899999999999999999998889888876469999999999999
Q ss_pred HHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHH
Q 013883 186 TILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 186 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
+++.++++||+|++++|+|+.+...++..|++++.+|++++ ++.+|++.+++++.+++++|++++||||||.+++.+++
T Consensus 107 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~ 186 (383)
T TIGR03540 107 IPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFF 186 (383)
T ss_pred HHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHH
Confidence 99999999999999999999999999999999999999754 57789999999998899999999999999999999999
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCC-CCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 343 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~ 343 (434)
++|+++|++||++||+||+|.++.+++ ...++..+....+++++++||||.||++|+|+||+++++++++.+...+...
T Consensus 187 ~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~ 266 (383)
T TIGR03540 187 KELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTNV 266 (383)
T ss_pred HHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHHhc
Confidence 999999999999999999999998865 3345555544456789999999999999999999999999999888877666
Q ss_pred ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhc
Q 013883 344 TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEV 423 (434)
Q Consensus 344 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~ 423 (434)
..+.+.+.|.++..+|++.++|++++++.++++++.+.+.|++.|+.+.++++++|+|+++++ +. ++.+++++|++++
T Consensus 267 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~-~~-~~~~~~~~ll~~~ 344 (383)
T TIGR03540 267 DSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPKATFYVWVPVPE-GY-TSAEFAARLLEET 344 (383)
T ss_pred ccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCCcceEEEEECCC-CC-CHHHHHHHHHHHC
Confidence 677888999999999998788999999999999999999999999999999999999999853 32 5778999988888
Q ss_pred CeEEECCCCC
Q 013883 424 GVVAIPTSVF 433 (434)
Q Consensus 424 GV~v~pG~~F 433 (434)
||.+.||+.|
T Consensus 345 gi~v~~g~~f 354 (383)
T TIGR03540 345 GVVVTPGVGF 354 (383)
T ss_pred CEEEecchhh
Confidence 9999999877
No 15
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-50 Score=401.28 Aligned_cols=322 Identities=26% Similarity=0.496 Sum_probs=287.5
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+++.++|+.|.|++++++.+.+++.+.+......|.+..|.++||+++++++.+.+|..++++ +|++|+|+++++..++
T Consensus 31 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~it~G~~~al~~~~ 109 (387)
T PRK08960 31 GHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPE-RILVTPGGSGALLLAS 109 (387)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChh-hEEEccCcHHHHHHHH
Confidence 457899999999998899999999988876556799999999999999999999999999998 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
.+++++||+|++++|+|+.+...+...|.+++.++++.+ ++.+|++.++++++++++++++++||||||.+++.+++++
T Consensus 110 ~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~ 189 (387)
T PRK08960 110 SLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAA 189 (387)
T ss_pred HHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHH
Confidence 999999999999999999999999999999999999754 5789999999999988999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~ 346 (434)
|+++|++||++||+||+|.++.+++...++.. ..+++++++||||.+|++|+|+||++++++++++++........+
T Consensus 190 l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~---~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~ 266 (387)
T PRK08960 190 LSQALRARGGHLVVDEIYHGLTYGVDAASVLE---VDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLAQNLYIS 266 (387)
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCChhh---ccCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHHHHhhhccC
Confidence 99999999999999999999988654434333 346899999999999999999999999999999998887767778
Q ss_pred CchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEe-ecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcC
Q 013883 347 TSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKV-FPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVG 424 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~G 424 (434)
.+.+.|.++..+|.+ ..+++++++..++++++.+.+.|++.|+.+ ..++|++|+|++++..+. ++.+++++|++++|
T Consensus 267 ~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~~-~~~~~~~~ll~~~g 345 (387)
T PRK08960 267 ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGG-DAFAFCRHFLETEH 345 (387)
T ss_pred CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccccCC-CHHHHHHHHHHhCC
Confidence 899999999999975 357899999999999999999999988775 468899999999854322 46789988888889
Q ss_pred eEEECCCCCC
Q 013883 425 VVAIPTSVFY 434 (434)
Q Consensus 425 V~v~pG~~F~ 434 (434)
|.+.||+.|.
T Consensus 346 i~v~pg~~f~ 355 (387)
T PRK08960 346 VAFTPGLDFG 355 (387)
T ss_pred EEEcCchHhC
Confidence 9999998873
No 16
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=4.9e-50 Score=399.05 Aligned_cols=338 Identities=32% Similarity=0.550 Sum_probs=296.6
Q ss_pred ccHHHHHHHHh-hcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEE
Q 013883 96 TTIFTQMSMLA-IKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVT 174 (434)
Q Consensus 96 ~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~ 174 (434)
...+.+..... ..++.|+|+.|.|++++++.+.+++.+.+.+....|++..|.++||+++++++.+.+|..++++.+|+
T Consensus 14 ~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~ 93 (387)
T PRK07683 14 ISGIRQFSNMVQNYDNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEII 93 (387)
T ss_pred ccHHHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEE
Confidence 33334433333 34578999999999888889999999988776678999999999999999999988898888864799
Q ss_pred EcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCC
Q 013883 175 VTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNP 254 (434)
Q Consensus 175 ~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NP 254 (434)
+|+|+++++.+++..++++||+|++++|+|.+|...++..|++++.++.+++++.+|.+.+++.++++++++++++||||
T Consensus 94 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NP 173 (387)
T PRK07683 94 VTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNP 173 (387)
T ss_pred EeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999988767888999999999889999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHH
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~ 334 (434)
||.+++.+++++|+++|+++|++||+||+|.++.+++...++..+.+.++++++++||||.+|++|+|+||+++++++++
T Consensus 174 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~ 253 (387)
T PRK07683 174 TGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAK 253 (387)
T ss_pred CCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHH
Confidence 99999999999999999999999999999999988765555666555567899999999999999999999999999999
Q ss_pred HHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHH
Q 013883 335 GVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIA 414 (434)
Q Consensus 335 ~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (434)
++.........+++.+.|.++..+|.+.+.++++++..++++++.+.+.|++.|+.+.+++|++|+|+.+.+.+. ++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 332 (387)
T PRK07683 254 HILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIGHFTM-SSFD 332 (387)
T ss_pred HHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCeeEEEEEecccCCC-CHHH
Confidence 988776555566788899999999988777888899999999999999999999998899999999998754333 4678
Q ss_pred HHHHHHHhcCeEEECCCCCC
Q 013883 415 FCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 415 ~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++.++++++||.+.||+.|.
T Consensus 333 ~~~~ll~~~gI~v~pg~~f~ 352 (387)
T PRK07683 333 FALDLVEEAGLAVVPGSAFS 352 (387)
T ss_pred HHHHHHHhCCEEEcCchhhC
Confidence 88888888899999998873
No 17
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=6e-50 Score=398.51 Aligned_cols=324 Identities=31% Similarity=0.549 Sum_probs=288.3
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
+++.++|+.|.|++++++.+.+++.+++... ...|++..|.++||+++++++++.+|.+++++++|++|+|+++++..+
T Consensus 30 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~ 109 (385)
T PRK09276 30 GVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHI 109 (385)
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHH
Confidence 4578999999999999999999998887653 467999999999999999999988898888874599999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+..++++||+|++++|+|+.|...++..|++++.++++++ ++.+|++.+++.+.+++++|++++||||||.+++.++++
T Consensus 110 ~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~ 189 (385)
T PRK09276 110 PLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFE 189 (385)
T ss_pred HHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999999753 577899999998888999999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCC-CCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEM-DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT 344 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~ 344 (434)
+|+++|++||++||+||+|.++.+++ ...++..+....+++++++||||.||++|+|+||+++++++++.+...+....
T Consensus 190 ~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~~ 269 (385)
T PRK09276 190 EVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVKSNVD 269 (385)
T ss_pred HHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHHHHHHHhhcc
Confidence 99999999999999999999998864 23455555444567899999999999999999999999999999988776666
Q ss_pred cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcC
Q 013883 345 FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVG 424 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~G 424 (434)
.+.+.+.|.++..+|.+.+.|+++++++++++++.+.+.|++.|+.+.++++++|+|+++++ +. ++.+++++|++++|
T Consensus 270 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~l~~~ll~~~g 347 (385)
T PRK09276 270 SGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLGLEVEPPKATFYVWAPVPK-GY-TSAEFATLLLDKAG 347 (385)
T ss_pred CCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEECCC-CC-CHHHHHHHHHHhCC
Confidence 67788899999999987778899999999999999999999999998889999999999853 22 57789999988789
Q ss_pred eEEECCCCC
Q 013883 425 VVAIPTSVF 433 (434)
Q Consensus 425 V~v~pG~~F 433 (434)
|.+.||+.|
T Consensus 348 i~v~~g~~f 356 (385)
T PRK09276 348 VVVTPGNGF 356 (385)
T ss_pred EEECCchhh
Confidence 999999876
No 18
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-50 Score=400.21 Aligned_cols=326 Identities=23% Similarity=0.449 Sum_probs=282.3
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
+++.++|+.|.|+.+.++.+.+++.+.+.. ....|++..|.++||+++++++.+.+|+.++++++|++|+|+++++..+
T Consensus 32 ~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~ 111 (403)
T PRK08636 32 GEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHL 111 (403)
T ss_pred CCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHH
Confidence 457899999999987777777777666554 3578999999999999999999998999888864699999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHH----Hhhcc---cCCcEEEecCCCCCcccC
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEEL----KSTIS---KNTRAILMNTPHNPTGKM 258 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l----~~~i~---~~~~~i~~~~p~NPTG~~ 258 (434)
+.+++++||+|++++|+|+.+...++..|++++.|+++. +++++|++.+ +++++ .+++++++++||||||.+
T Consensus 112 ~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~ 191 (403)
T PRK08636 112 VQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTAT 191 (403)
T ss_pred HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCcc
Confidence 999999999999999999999999999999999999863 4588998754 55553 468899999999999999
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHH
Q 013883 259 FTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVR 337 (434)
Q Consensus 259 ~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~ 337 (434)
+|.+++++|+++|++||++||+||+|.++.+++. ..++..++...+++++++||||.||++|+|+||+++++++++.+.
T Consensus 192 ~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~ 271 (403)
T PRK08636 192 VEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGALK 271 (403)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHHHHHH
Confidence 9999999999999999999999999999988753 345555554446788899999999999999999999999999998
Q ss_pred HHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCC-CCCHHHHH
Q 013883 338 QAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFG-HETDIAFC 416 (434)
Q Consensus 338 ~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 416 (434)
+......++.+.+.|.++..+++..+++++++++.++++++.+.+.|++.|+.+.++++|+|+|+++++.. ..++.+++
T Consensus 272 ~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~l~ 351 (403)
T PRK08636 272 KIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANAGWELQKPRASMFVWAKIPEPARHLGSLEFS 351 (403)
T ss_pred HHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCcceEEEEECCCccCCCCHHHHH
Confidence 87766667888889999888887667889999999999999999999999998889999999999986421 12467898
Q ss_pred HHHHHhcCeEEECCCCC
Q 013883 417 EYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 417 ~~Ll~~~GV~v~pG~~F 433 (434)
.++++++||.+.||..|
T Consensus 352 ~~ll~~~gV~v~pg~~f 368 (403)
T PRK08636 352 KQLLTEAKVAVSPGIGF 368 (403)
T ss_pred HHHHHhCCEEEecchhh
Confidence 88888889999999887
No 19
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8e-50 Score=398.53 Aligned_cols=324 Identities=28% Similarity=0.534 Sum_probs=285.8
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
+++.++|+.|.|+.++++.+.+++.+.+... ...|++..|.++||+++++++++.+|.+++++++|++|+|+++++..+
T Consensus 34 g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~ 113 (394)
T PRK05942 34 GLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHL 113 (394)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHH
Confidence 4578999999998877777777776666543 468999999999999999999988898888874589999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+.+++++||+|++++|+|+.+...+...|++++.++++. .++.+|++.+++.+.+++++|++++||||||.+++.++++
T Consensus 114 ~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~ 193 (394)
T PRK05942 114 ALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFE 193 (394)
T ss_pred HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHH
Confidence 999999999999999999999999999999999999975 3578999999999988999999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT 344 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~ 344 (434)
+|+++|++||++||+||+|.++.+++. ..++..+....+.+++++||||.||++|+|+||+++++++++.++..+....
T Consensus 194 ~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~~~~~ 273 (394)
T PRK05942 194 EIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKTNLD 273 (394)
T ss_pred HHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHHHHhhcc
Confidence 999999999999999999999988653 3344445443567899999999999999999999999999999988877667
Q ss_pred cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcC
Q 013883 345 FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVG 424 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~G 424 (434)
++.+.+.|.++..+|+..++++++++++++++++.+.+.|++.|+.+.++++++|+|++++. +. ++.+++.++++++|
T Consensus 274 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~~~~~~~-~~-~~~~~~~~~l~~~g 351 (394)
T PRK05942 274 YGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGELGWNIPPTKATMYLWVPCPV-GM-GSTDFALNVLQKTG 351 (394)
T ss_pred cCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeeEEEEECCC-CC-CHHHHHHHHHHHCC
Confidence 88889999999999987778899999999999999999999999998899999999999853 22 46788888888889
Q ss_pred eEEECCCCC
Q 013883 425 VVAIPTSVF 433 (434)
Q Consensus 425 V~v~pG~~F 433 (434)
|.+.||+.|
T Consensus 352 V~v~~g~~f 360 (394)
T PRK05942 352 VVVTPGNAF 360 (394)
T ss_pred EEEeCChhh
Confidence 999999877
No 20
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=5e-50 Score=400.36 Aligned_cols=320 Identities=24% Similarity=0.377 Sum_probs=281.3
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLE-VDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~-~~~~~~i~~t~G~~~ai~~~ 186 (434)
+.+.|+|+.|.|++++++.+.+++.+.+. ....|++..|.++||+++++++.+.+|.. ++++++|++|+|+++++..+
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~ 106 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAF 106 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHH
Confidence 45899999999999989999999887765 45789999999999999999999988988 88854799999999999999
Q ss_pred HHHccCC---CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHH
Q 013883 187 ILGLINP---GDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTRE 262 (434)
Q Consensus 187 ~~~l~~~---gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e 262 (434)
+++++++ ||.|++++|+|..|..+++..|++++.+|+++ +++++|++.+++.+.++++++++++||||||.+++.+
T Consensus 107 ~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~ 186 (396)
T PRK09147 107 AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLD 186 (396)
T ss_pred HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHH
Confidence 9999999 89999999999999999999999999999975 3578999999988877899999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcCcCCccccCCCCcccc------CCC-CCCCceEEEccCChhhccccceeeeEEeChhhHHH
Q 013883 263 ELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIA------SLP-GMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG 335 (434)
Q Consensus 263 ~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~------~~~-~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~ 335 (434)
++++|+++|++||++||+||+|.++.|++...... .+. ...+++++++||||.++++|+|+||++++++++++
T Consensus 187 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~ 266 (396)
T PRK09147 187 DWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKK 266 (396)
T ss_pred HHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHHH
Confidence 99999999999999999999999998876322211 111 13579999999999999999999999999999999
Q ss_pred HHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHH
Q 013883 336 VRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAF 415 (434)
Q Consensus 336 l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (434)
+.+.+.....+.+.+.|.++...+.+ ++++++.++.++++++.+.+.|++. +.+..+++++|+|++++ .++.++
T Consensus 267 ~~~~~~~~~~~~~~~~q~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~~g~f~~~~~~----~~~~~~ 340 (396)
T PRK09147 267 FLLYRTYHGCAMPPAVQAASIAAWND-EAHVRENRALYREKFDAVTPILAPV-LDVQLPDAGFYLWAKVP----GDDTEF 340 (396)
T ss_pred HHHHhhhcccCCCHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCeeEEEEEECC----CCHHHH
Confidence 88777666678888999998888864 5688999999999999999999885 66678899999999985 147789
Q ss_pred HHHHHHhcCeEEECCCCCC
Q 013883 416 CEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 416 ~~~Ll~~~GV~v~pG~~F~ 434 (434)
+.+|++++||.+.||+.|+
T Consensus 341 ~~~ll~~~gv~v~pg~~f~ 359 (396)
T PRK09147 341 ARRLYADYNVTVLPGSYLA 359 (396)
T ss_pred HHHHHHhCCEEEeCCcccc
Confidence 9999888899999999873
No 21
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1e-49 Score=398.74 Aligned_cols=326 Identities=26% Similarity=0.493 Sum_probs=282.5
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
+++.|+|+.|.|++++++.+.+++.+.+.. ....|++..|.++||+++++++++.+|..++++++|++|+|+++++..+
T Consensus 29 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~ 108 (405)
T PRK09148 29 GADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANM 108 (405)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHH
Confidence 457899999999988888888888877654 3478999999999999999999988898888864799999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCC-CCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPD-FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~-~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+..++++||+|++++|+|+.|...+...|++++.++++.++ +-.+++...+...++++++++++||||||.+++.++++
T Consensus 109 ~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~ 188 (405)
T PRK09148 109 AQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYK 188 (405)
T ss_pred HHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHH
Confidence 99999999999999999999999999999999999987533 43445554444456889999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCC-ccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDH-ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT 344 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~ 344 (434)
+|+++|++||++||+||+|.++.|++.. .++..++...+++++++||||.+|++|+|+||+++++++++.+...+....
T Consensus 189 ~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~~~~ 268 (405)
T PRK09148 189 DVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSYLD 268 (405)
T ss_pred HHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999886532 334444444567889999999999999999999999999999998887777
Q ss_pred cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCC-CCCCHHHHHHHHHHhc
Q 013883 345 FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF-GHETDIAFCEYLIKEV 423 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ll~~~ 423 (434)
++.+.+.|.++..+|++.++++++++..++++++.+.+.|++.|+.+..+++|+|+|+++++. ...++.+++.+|++++
T Consensus 269 ~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~ 348 (405)
T PRK09148 269 YGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKA 348 (405)
T ss_pred cCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhC
Confidence 888999999999999877788999999999999999999999998888899999999998542 1113578989888878
Q ss_pred CeEEECCCCC
Q 013883 424 GVVAIPTSVF 433 (434)
Q Consensus 424 GV~v~pG~~F 433 (434)
||.+.||+.|
T Consensus 349 gV~v~pg~~f 358 (405)
T PRK09148 349 DVAVAPGVGF 358 (405)
T ss_pred CEEEeCchhh
Confidence 9999999877
No 22
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=2.8e-49 Score=394.09 Aligned_cols=344 Identities=31% Similarity=0.565 Sum_probs=293.3
Q ss_pred HHhhhccccHHHHHHH-HhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC
Q 013883 89 KRLEKFKTTIFTQMSM-LAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEV 167 (434)
Q Consensus 89 ~~~~~~~~~~~~~~~~-~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~ 167 (434)
+++.........++.. ....++.|+|+.|.|++.+++.+.+++.+++......|.+..|.++||+++++++++.+|+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~ 88 (391)
T PRK07309 9 KQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDY 88 (391)
T ss_pred hhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Confidence 3344444444455544 233368999999999998888899999888776556799999999999999999999899888
Q ss_pred CCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc---CCc
Q 013883 168 DPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK---NTR 244 (434)
Q Consensus 168 ~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~---~~~ 244 (434)
+++++|++|+|+++++.+++.+++++||+|++++|+|.++..+++..|++++.++.++.++.+|++.+++++++ +++
T Consensus 89 ~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 168 (391)
T PRK07309 89 APENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLK 168 (391)
T ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeE
Confidence 76448999999999999999999999999999999999999999999999999998765678999999998864 588
Q ss_pred EEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhcccccee
Q 013883 245 AILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKI 323 (434)
Q Consensus 245 ~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~ 323 (434)
+|++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..++..+ ..+++++++||||.||++|+|+
T Consensus 169 ~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~g~~GlRv 246 (391)
T PRK07309 169 AVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY--LPDQTILINGLSKSHAMTGWRI 246 (391)
T ss_pred EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh--ccCCEEEEecChhhccCcccee
Confidence 999999999999999999999999999999999999999999998543 3343333 2478999999999999999999
Q ss_pred eeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeee
Q 013883 324 GWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVD 403 (434)
Q Consensus 324 G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 403 (434)
||+++++++++.+.........+++.+.|.++..+|++...+...++..++++++.+.+.|++.|+.+.+++|++|+|++
T Consensus 247 G~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~~~~~~ 326 (391)
T PRK07309 247 GLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGAFYIFAK 326 (391)
T ss_pred EEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEE
Confidence 99999999999998776655667889999999999988655567788899999999999999999999999999999998
Q ss_pred cCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 404 HTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 404 ~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+++....++.++++++++++||.+.||+.|+
T Consensus 327 l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~ 357 (391)
T PRK07309 327 IPAGYNQDSFKFLQDFARKKAVAFIPGAAFG 357 (391)
T ss_pred CCCCCCCCHHHHHHHHHHhCCEEEeCchhhC
Confidence 7542122467888888888899999999874
No 23
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3e-49 Score=394.96 Aligned_cols=323 Identities=27% Similarity=0.427 Sum_probs=286.7
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCCCCcEEEcCChHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLE-VDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~-~~~~~~i~~t~G~~~ai~~~ 186 (434)
.++|+|+.|.|++.+++.+.+++.+++... ...|++ .|.++||+++++++.+.+|+. ++++++|++|+|+++++..+
T Consensus 44 ~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~ 122 (410)
T PRK06290 44 MELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAML 122 (410)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHH
Confidence 368999999999999999998888776543 456875 799999999999999888988 88864699999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+.+++++||+|++++|+|+.|...++..|++++.+|++++ ++.+|++.+++++.+++++|++++||||||.+++.++++
T Consensus 123 ~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~ 202 (410)
T PRK06290 123 PSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYE 202 (410)
T ss_pred HHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHH
Confidence 9999999999999999999999999999999999999864 577899999999988899999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTF 345 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~ 345 (434)
+|+++|++||++||+||+|.++.+++...++..+....+++|+++||||.+|++|+|+||+++++++++.+...+.....
T Consensus 203 ~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~~~~ 282 (410)
T PRK06290 203 EVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNNDS 282 (410)
T ss_pred HHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHHHhcccc
Confidence 99999999999999999999998876544555555445778999999999999999999999999999999888877777
Q ss_pred CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCC-----CCCHHHHHHHHH
Q 013883 346 ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFG-----HETDIAFCEYLI 420 (434)
Q Consensus 346 ~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Ll 420 (434)
+.+.+.|.++..+|++. +++++.++.++++++.+.+.|++.|+.+.+++|+||+|+++++.. ..++.+++++|+
T Consensus 283 ~~~~~~q~aa~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll 361 (410)
T PRK06290 283 GQFIAIQKAGIYALDHP-EITEKIREKYSRRLDKLVKILNEVGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLI 361 (410)
T ss_pred CCcHHHHHHHHHHhhCc-HHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHH
Confidence 77889999999999874 688889999999999999999999999999999999999885421 135789999999
Q ss_pred HhcCeEEECCCCC
Q 013883 421 KEVGVVAIPTSVF 433 (434)
Q Consensus 421 ~~~GV~v~pG~~F 433 (434)
++.+|.+.||+.|
T Consensus 362 ~~~~v~~~p~~~~ 374 (410)
T PRK06290 362 KEKLISTVPWDDA 374 (410)
T ss_pred HhCCEEEECCccc
Confidence 9888899999866
No 24
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-49 Score=393.35 Aligned_cols=322 Identities=29% Similarity=0.543 Sum_probs=288.6
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
+++|+|+.|+|++++++.+.+++.+.+.+....|.+..|.++||+++++++.+.+|..++++ +|++|+|+++++..++.
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~-~i~~t~g~~~al~~~~~ 102 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPE-RIAVTSSGVQALMLAAQ 102 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcc-eEEEeCChHHHHHHHHH
Confidence 47899999999999999999999998887666799999999999999999998889888888 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC--CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP--PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~--~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
.++++||+|++++|+|..+...++.+|++++.+|+++ .++.+|++.+++.++++++++++++||||||.+++.+++++
T Consensus 103 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~ 182 (382)
T PRK06108 103 ALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRA 182 (382)
T ss_pred HhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence 9999999999999999999999999999999999974 34679999999999888999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccC-C-CCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFE-M-DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT 344 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~-~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~ 344 (434)
|+++|+++|+++|+||+|.++.++ + ....+..+....+++++++||||.||++|+|+||+++++++++.+........
T Consensus 183 l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~ 262 (382)
T PRK06108 183 ILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNT 262 (382)
T ss_pred HHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhcc
Confidence 999999999999999999999886 2 22333444444578999999999999999999999999999999888776667
Q ss_pred cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhc
Q 013883 345 FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEV 423 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~ 423 (434)
.+++.+.|.++..+|.+.++++++++++++++++.+.+.|++. |+.+.++++++|+|+++.+. .++.+++++|++++
T Consensus 263 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~--~~~~~~~~~ll~~~ 340 (382)
T PRK06108 263 SCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGV--TDSLALAKRLVDEA 340 (382)
T ss_pred cCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCC--CCHHHHHHHHHHhC
Confidence 7889999999999999877888999999999999999999887 89988999999999987532 25778999998888
Q ss_pred CeEEECCCCC
Q 013883 424 GVVAIPTSVF 433 (434)
Q Consensus 424 GV~v~pG~~F 433 (434)
||.+.||+.|
T Consensus 341 gV~v~pg~~f 350 (382)
T PRK06108 341 GLGLAPGTAF 350 (382)
T ss_pred CEEEeCchhh
Confidence 9999999876
No 25
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=6.2e-49 Score=391.58 Aligned_cols=323 Identities=28% Similarity=0.522 Sum_probs=285.9
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+++.++|+.|.|++++++.+.+++.+.+......|++..|.++||+++++++++.+|..++++ +|++|+|+++++..++
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~t~G~~~al~~~~ 107 (388)
T PRK07337 29 GRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPE-RIVVTAGASAALLLAC 107 (388)
T ss_pred CCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChH-hEEEecCcHHHHHHHH
Confidence 457899999999998888899999888876667899999999999999999999899989998 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
..++++||+|++++|+|+.+...+...|++++.+++++ .++++|++.+++.+++++++|++++||||||.+++.+++++
T Consensus 108 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~ 187 (388)
T PRK07337 108 LALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRR 187 (388)
T ss_pred HHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHH
Confidence 99999999999999999999999999999999999975 46899999999999989999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~ 346 (434)
|+++|+++++++|+||+|.++.+++...+... ..+++++++||||.+|++|+|+||+++++++++.+.........+
T Consensus 188 i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~---~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~~~~~ 264 (388)
T PRK07337 188 IVEAVRARGGFTIVDEIYQGLSYDAAPVSALS---LGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQNLFIC 264 (388)
T ss_pred HHHHHHHCCCEEEEeccccccccCCCCcChhh---ccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHHHhccC
Confidence 99999999999999999999888654333332 346899999999999999999999999999999998887766778
Q ss_pred CchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEe-ecCCeeEEEeeecCCC---CCCCHHHHHHHHHH
Q 013883 347 TSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKV-FPSSGTYFVVVDHTPF---GHETDIAFCEYLIK 421 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~Ll~ 421 (434)
.+.+.|.++..++.+. .+++++.+..++++++.+.+.|++.|+.+ ..+++|+|+|+++++. +..++.+++.+|++
T Consensus 265 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~ 344 (388)
T PRK07337 265 ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLH 344 (388)
T ss_pred CChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHH
Confidence 8999999999999753 35678889999999999999999988765 4678999999998642 12257789989888
Q ss_pred hcCeEEECCCCCC
Q 013883 422 EVGVVAIPTSVFY 434 (434)
Q Consensus 422 ~~GV~v~pG~~F~ 434 (434)
++||.+.||+.|+
T Consensus 345 ~~gv~v~pg~~f~ 357 (388)
T PRK07337 345 DAGVVLVPGRDFG 357 (388)
T ss_pred hCCEEEeCchhhC
Confidence 8899999999874
No 26
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=5.3e-49 Score=392.60 Aligned_cols=320 Identities=26% Similarity=0.410 Sum_probs=279.5
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCCCCcEEEcCChHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLE--VDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~--~~~~~~i~~t~G~~~ai~~ 185 (434)
+.+.++|+.|.|++++++.+.+++.+.+. ....|++..|.++||+++++++.+.+|.+ ++++++|++|+|+++++..
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~ 105 (393)
T TIGR03538 27 SKPPIALSIGEPKHPTPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFA 105 (393)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHH
Confidence 45789999999999999999999988765 45789999999999999999999888876 6775479999999999999
Q ss_pred HHHHccCCCCe--EEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHH
Q 013883 186 TILGLINPGDE--VILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTRE 262 (434)
Q Consensus 186 ~~~~l~~~gd~--Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e 262 (434)
++.++++|||+ |++++|+|..|...+...|++++.++++++ ++.+|++.+++++.+++++|++++||||||.+++.+
T Consensus 106 ~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~~~s~~ 185 (393)
T TIGR03538 106 FAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLD 185 (393)
T ss_pred HHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcCcccCHH
Confidence 99999999986 999999999999999999999999999753 578999999998888899999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcCcCCccccCCC--Ccccc-C---CC-CCCCceEEEccCChhhccccceeeeEEeChhhHHH
Q 013883 263 ELNVIASLCIENDVLVFSDEVYDKLAFEMD--HISIA-S---LP-GMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG 335 (434)
Q Consensus 263 ~l~~i~~la~~~~~~iI~Deay~~~~~~~~--~~~~~-~---~~-~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~ 335 (434)
++++|+++|++||++||+||+|.++.+++. ..+.. . .. ...+++++++||||.++++|+|+||+++++++++.
T Consensus 186 ~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~ 265 (393)
T TIGR03538 186 TLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKA 265 (393)
T ss_pred HHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHHH
Confidence 999999999999999999999999987642 22211 1 11 13578999999999999999999999999999999
Q ss_pred HHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHH
Q 013883 336 VRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAF 415 (434)
Q Consensus 336 l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (434)
+...+.....+.+.+.|.++...|.+ ++++++.++.++++++.+.+.|++. +.+..+++++|+|++++ .++.++
T Consensus 266 ~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~gg~f~~~~~~----~~~~~~ 339 (393)
T TIGR03538 266 FLRYRTYHGCAMPIPTQLASIAAWND-EQHVRENRALYREKFAAVLEILGQV-LDLELPDAGFYLWPKVP----GDDEAF 339 (393)
T ss_pred HHHHHHhhccCcCHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHhh-CcccCCCeeEEEEEECC----CCHHHH
Confidence 88877666677889999998888865 5688999999999999999999875 55668899999999985 246789
Q ss_pred HHHHHHhcCeEEECCCCCC
Q 013883 416 CEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 416 ~~~Ll~~~GV~v~pG~~F~ 434 (434)
+++|++++||.+.||+.|+
T Consensus 340 ~~~l~~~~gV~v~pg~~f~ 358 (393)
T TIGR03538 340 ARALYEEENVTVLPGRFLA 358 (393)
T ss_pred HHHHHHHCCEEEeCCcccc
Confidence 9998888899999999873
No 27
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=6.8e-49 Score=393.16 Aligned_cols=325 Identities=25% Similarity=0.424 Sum_probs=276.9
Q ss_pred hhcCCeeEeCCCCCC----CCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 106 AIKHGAINLGQGFPN----FDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 106 ~~~~~~i~l~~g~p~----~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
+.++++|+|++|.|+ +++++.+.+++.+++.+. ...|.+..|.++||+++++++.+.+|..++++ +|++|+|++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~I~it~G~~ 107 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPD-DVYLTLGCK 107 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHh-hEEEecChH
Confidence 456689999999998 899999999999888764 46799999999999999999999999889998 899999999
Q ss_pred HHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCC
Q 013883 181 EAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMF 259 (434)
Q Consensus 181 ~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~ 259 (434)
+++.+++.+++++||.|++++|+|+.|...+...|++++.+++++ +++.+|++.++++++++++++++++||||||.++
T Consensus 108 ~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~ 187 (409)
T PLN00143 108 HAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVY 187 (409)
T ss_pred HHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCcc
Confidence 999999999999999999999999999999999999999999863 4678999999999988899999999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC-ccccCCCCCCCceEEEccCChhhccccceeeeEEeC-h-hhH---
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDH-ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-P-HLT--- 333 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~-~~~--- 333 (434)
+.+++++|+++|++||++||+||+|.++.+++.. .++..+. ..+++++++||||.|+++|+|+||++++ + .++
T Consensus 188 s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~-~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~ 266 (409)
T PLN00143 188 SYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFA-SIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQIC 266 (409)
T ss_pred CHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhc-ccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhH
Confidence 9999999999999999999999999999987542 3333343 3468999999999999999999999993 3 332
Q ss_pred ---HHHHHHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEe--ecCCeeEEEeeecCCC
Q 013883 334 ---WGVRQAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKV--FPSSGTYFVVVDHTPF 407 (434)
Q Consensus 334 ---~~l~~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~~~~~~~~~~~ 407 (434)
..+...... ....+.+.|.++..+|++ ..+++++.++.++++++.+.+.|++++... ..++|++|+|++++..
T Consensus 267 ~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~ 345 (409)
T PLN00143 267 EIADSIKKALNP-APFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLL 345 (409)
T ss_pred HHHHHHHHHHhc-cCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchh
Confidence 333333322 223578899999999986 367899999999999999999998875332 3688999999998532
Q ss_pred ---CCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 408 ---GHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 408 ---~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+..++.+++.++++++||.++||+.|
T Consensus 346 ~~~~~~~~~~~~~~ll~~~gV~v~pg~~f 374 (409)
T PLN00143 346 LLEDIEDDMEFCLKLAKEESLIILPGVTV 374 (409)
T ss_pred hcCCCCCHHHHHHHHHHhCCEEEeCcccc
Confidence 22346788888888889999999987
No 28
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-48 Score=387.69 Aligned_cols=342 Identities=26% Similarity=0.530 Sum_probs=292.8
Q ss_pred HHhhhccccHHHHHHHH-hhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCC
Q 013883 89 KRLEKFKTTIFTQMSML-AIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLE 166 (434)
Q Consensus 89 ~~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~ 166 (434)
+++...+...+..+... +..++.++|+.|.|++++++.+.+++.+.+... ...|.+..|.+++|+++++++.+.+|..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~ 85 (389)
T PRK05957 6 SRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIE 85 (389)
T ss_pred HHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 33434444444333322 223578999999999999999999998877643 3579999999999999999999888988
Q ss_pred CC-CCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcE
Q 013883 167 VD-PEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRA 245 (434)
Q Consensus 167 ~~-~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~ 245 (434)
++ ++ +|++|+|+++++..++..++++||+|++++|+|..+...++..|++++.++.+ +++++|++.+++++++++++
T Consensus 86 ~~~~~-~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~kl 163 (389)
T PRK05957 86 LNNEQ-AIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD-DNYQLQPEAIEQAITPKTRA 163 (389)
T ss_pred CCCCC-eEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC-CCCCcCHHHHHHhcCcCceE
Confidence 77 55 89999999999999999999999999999999999999999999999999986 36889999999999989999
Q ss_pred EEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceee
Q 013883 246 ILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIG 324 (434)
Q Consensus 246 i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G 324 (434)
|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..+...+.+..+++++++||||.+|++|+|+|
T Consensus 164 v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 243 (389)
T PRK05957 164 IVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIG 243 (389)
T ss_pred EEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeE
Confidence 99999999999999999999999999999999999999999988652 22344444456789999999999999999999
Q ss_pred eEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-C-CEeecCCeeEEEee
Q 013883 325 WAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-G-FKVFPSSGTYFVVV 402 (434)
Q Consensus 325 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g-~~~~~~~~~~~~~~ 402 (434)
|+++++++++++.........+.+.+.|.++..+|++..+++++.++.++++++.+.+.|+++ + +.+.+++|++|+|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~ 323 (389)
T PRK05957 244 YMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFL 323 (389)
T ss_pred EEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEE
Confidence 999999999999988876677888899999999998877788888899999999999999987 5 37778999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 403 DHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 403 ~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++.. +. ++.+++++|++++||.+.||+.|+
T Consensus 324 ~~~~-~~-~~~~~~~~l~~~~gv~v~pg~~f~ 353 (389)
T PRK05957 324 KVNT-DL-NDFELVKQLIREYRVAVIPGTTFG 353 (389)
T ss_pred eCCC-CC-ChHHHHHHHHHHCCEEEccchhhC
Confidence 9743 33 578999999887899999999873
No 29
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.2e-48 Score=395.71 Aligned_cols=324 Identities=23% Similarity=0.453 Sum_probs=277.3
Q ss_pred cCCeeEeCCCCCC----CCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 108 KHGAINLGQGFPN----FDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 108 ~~~~i~l~~g~p~----~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
..++|+|++|.|+ +.+++.+.+++.++++.+ ...|.+..|.++||+++|+++++.++..++++ +|++|+|++++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~-~I~it~G~~~a 143 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPE-DIFLTAGCNQG 143 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcc-cEEEeCCHHHH
Confidence 4579999999998 556788899998888764 36799999999999999999998889899998 89999999999
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCH
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTR 261 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~ 261 (434)
+..++.++++|||+|++++|+|+.|...+...|++++.+++.+ +++++|++.++++++++++++++++||||||.+++.
T Consensus 144 l~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~ 223 (462)
T PLN02187 144 IEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSH 223 (462)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCH
Confidence 9999999999999999999999999999999999999999864 468999999999998899999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hh----hHHH
Q 013883 262 EELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PH----LTWG 335 (434)
Q Consensus 262 e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~----~~~~ 335 (434)
+++++|+++|++||++||+||+|.++.|++. ..++..+.. ..++++++||||.|+++|+|+||++++ ++ ++..
T Consensus 224 e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~-~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~ 302 (462)
T PLN02187 224 DHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFAS-IVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKV 302 (462)
T ss_pred HHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhcc-CCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHH
Confidence 9999999999999999999999999998763 334444433 246999999999999999999999984 32 3345
Q ss_pred HHHHhhcccc--CCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCE--eecCCeeEEEeeecCC---C
Q 013883 336 VRQAHSFLTF--ATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFK--VFPSSGTYFVVVDHTP---F 407 (434)
Q Consensus 336 l~~~~~~~~~--~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~--~~~~~~~~~~~~~~~~---~ 407 (434)
+...+..... +++.+.|.++..+|++ .++|++++++.++++++.+.+.|++.+.. +..|+|++|+|+++.. .
T Consensus 303 ~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~ 382 (462)
T PLN02187 303 LQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMD 382 (462)
T ss_pred HHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCC
Confidence 6555554444 4578999999999985 46899999999999999999999987543 2368899999997642 1
Q ss_pred CCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 408 GHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 408 ~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+..++.+++.++++++||.+.||+.|
T Consensus 383 ~~~~~~~~~~~ll~~~gV~v~pG~~f 408 (462)
T PLN02187 383 NIKDDIDFCVKLAREENLVFLPGDAL 408 (462)
T ss_pred CCCCHHHHHHHHHhhCCEEEECcccc
Confidence 22246688888888889999999987
No 30
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-48 Score=389.91 Aligned_cols=326 Identities=29% Similarity=0.554 Sum_probs=290.2
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
++++++|+.|.|++++++.+.+++.+++.+...+|.+..|.++||+++++++.+.+|..++++ +|++|+|+++++..++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~ 110 (402)
T PRK06107 32 GRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADN-EITVGGGAKQAIFLAL 110 (402)
T ss_pred cCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChh-hEEEeCCHHHHHHHHH
Confidence 457899999999999889999999998876667899999999999999999998889988888 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
.+++++||+|++++|+|..|...+...|.+++.++++. +++.+|++.++++++++++++++++||||||.+++.+++++
T Consensus 111 ~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~ 190 (402)
T PRK06107 111 MATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRA 190 (402)
T ss_pred HHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHH
Confidence 99999999999999999999999999999998888864 45789999999999888999999999999999999999999
Q ss_pred HHHHHHHc-CcEEEEcCcCCccccCCC-CccccCC-CCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc
Q 013883 267 IASLCIEN-DVLVFSDEVYDKLAFEMD-HISIASL-PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 343 (434)
Q Consensus 267 i~~la~~~-~~~iI~Deay~~~~~~~~-~~~~~~~-~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~ 343 (434)
|+++|++| ++++|+||+|.++.|++. ..++..+ .+..+++++++||||.||++|+|+||+++++++++.+...+...
T Consensus 191 l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~ 270 (402)
T PRK06107 191 LADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQS 270 (402)
T ss_pred HHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHhc
Confidence 99999998 999999999999988653 3344444 23357899999999999999999999999999999999988877
Q ss_pred ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCC-------C--CCCHH
Q 013883 344 TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPF-------G--HETDI 413 (434)
Q Consensus 344 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-------~--~~~~~ 413 (434)
..+++.+.|.++..+|...+.++++.++.++++++.+.+.|++. |+.+.+++||||+|+++... + ..++.
T Consensus 271 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (402)
T PRK06107 271 SSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQ 350 (402)
T ss_pred ccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeecccccccccccccCCCCHH
Confidence 88999999999999998667789999999999999999999987 88888999999999987421 1 12567
Q ss_pred HHHHHHHHhcCeEEECCCCCC
Q 013883 414 AFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 414 ~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+++++|++++||.+.||+.|.
T Consensus 351 ~~~~~l~~~~gv~v~pg~~Fg 371 (402)
T PRK06107 351 DVVLYLLDSAGVAVVQGTAYG 371 (402)
T ss_pred HHHHHHHHhCCEEEeCccccC
Confidence 889889888899999999883
No 31
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=5e-49 Score=396.55 Aligned_cols=322 Identities=23% Similarity=0.391 Sum_probs=272.3
Q ss_pred CCeeEeCCCCC---CCCCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 109 HGAINLGQGFP---NFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 109 ~~~i~l~~g~p---~~~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
.++++|++|.| ++++|+.+.+++.+++.+ ....|.+..|.++||+++++++.+.+|..++++ +|++|+|+++++.
T Consensus 32 ~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~-~I~it~G~~~al~ 110 (433)
T PRK06855 32 VKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPD-DIIFFNGLGDAIA 110 (433)
T ss_pred ccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHh-HEEEcCcHHHHHH
Confidence 46799999999 678999999998887754 346899999999999999999999899999998 8999999999999
Q ss_pred HHHHHccCCCCeEEEcCCCchhHHHH-HHHcCCEEEEEEcCC-CCCCCCHHHHHhhcc--cCCcEEEecCCCCCcccCCC
Q 013883 185 ATILGLINPGDEVILFAPFYDSYEAT-LSMAGAKIKCITLRP-PDFAIPIEELKSTIS--KNTRAILMNTPHNPTGKMFT 260 (434)
Q Consensus 185 ~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~--~~~~~i~~~~p~NPTG~~~~ 260 (434)
+++. ++++||.|++++|+|+.|... ....|++++.+++++ +++++|++.++++++ ++++++++++||||||.+++
T Consensus 111 ~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s 189 (433)
T PRK06855 111 KIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYP 189 (433)
T ss_pred HHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCC
Confidence 9885 889999999999999998755 345699999999875 468899999999986 35789999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeC-----h---h
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-----P---H 331 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-----~---~ 331 (434)
.+++++|+++|++||++||+||+|.++.|++. ..++..+.. .+++|+++||||.++++|+|+||++++ + +
T Consensus 190 ~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~ 268 (433)
T PRK06855 190 KEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKK 268 (433)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcC-cCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHH
Confidence 99999999999999999999999999998763 345555432 236799999999999999999999983 2 2
Q ss_pred hHHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCC
Q 013883 332 LTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFG 408 (434)
Q Consensus 332 ~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~ 408 (434)
+++.+...+. ...+++.+.|.++..+|++. ++++++++..|+++++.+.+.|++. |+.+.+++|+||+|+++++..
T Consensus 269 ~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~ 347 (433)
T PRK06855 269 YINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGV 347 (433)
T ss_pred HHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeecccccc
Confidence 2333333322 24567889999999999875 6789999999999999999999886 888889999999999986421
Q ss_pred -------------------------CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 409 -------------------------HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 409 -------------------------~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
..++.+++.+|++++||.+.||+.|+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~ 398 (433)
T PRK06855 348 LNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFC 398 (433)
T ss_pred ccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCC
Confidence 11467888888888999999999984
No 32
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=5.3e-49 Score=401.50 Aligned_cols=324 Identities=24% Similarity=0.429 Sum_probs=270.9
Q ss_pred CCeeEeCCCCCC----------------CCC-------------cHHHHHHHHHHHHc---CCCCCCCCCCcHHHHHHHH
Q 013883 109 HGAINLGQGFPN----------------FDG-------------PDFVKDAAIQAIRD---GKNQYARGHGVPEFNSAIA 156 (434)
Q Consensus 109 ~~~i~l~~g~p~----------------~~~-------------~~~v~~~~~~~~~~---~~~~Y~~~~G~~~lr~~ia 156 (434)
.++|+|++|+|+ +.. |..+.+++.++++. ....|++..|+++||++++
T Consensus 46 ~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia 125 (481)
T PTZ00377 46 DSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVA 125 (481)
T ss_pred ceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHH
Confidence 489999999996 655 33666666666554 2466999999999999999
Q ss_pred HHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc-CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHH
Q 013883 157 SRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI-NPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEE 234 (434)
Q Consensus 157 ~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~ 234 (434)
+++.+.+|..++++ +|++|+|+++++..++++++ ++||+|++++|+|+.|...++..|++++.+++++ ++|++|++.
T Consensus 126 ~~~~~~~g~~~~~~-~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~ 204 (481)
T PTZ00377 126 AFIERRDGVPKDPS-DIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEE 204 (481)
T ss_pred HHHHHhcCCCCChh-hEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHH
Confidence 99999999999998 89999999999999999998 7999999999999999999999999999999985 468999999
Q ss_pred HHhhccc------CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC--CccccC----CCCC
Q 013883 235 LKSTISK------NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD--HISIAS----LPGM 302 (434)
Q Consensus 235 l~~~i~~------~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~--~~~~~~----~~~~ 302 (434)
+++++++ ++|++++++||||||.+++.+++++|+++|++||++||+||+|.++.|+++ +.++.. +...
T Consensus 205 l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~ 284 (481)
T PTZ00377 205 LEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAE 284 (481)
T ss_pred HHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhccc
Confidence 9999875 789999999999999999999999999999999999999999999998542 233322 2211
Q ss_pred ---CCceEEEccCChh-hccccceeeeEEe---ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC-------hHHHH-
Q 013883 303 ---YERTVTMNSLGKT-FSLTGWKIGWAIA---PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP-------ETYYE- 367 (434)
Q Consensus 303 ---~~~~i~i~S~SK~-~g~~G~R~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~-------~~~~~- 367 (434)
..++++++||||. ++++|||+||+++ ++++++++.+.+. ...+++.+.|.++..+|+.. +.+.+
T Consensus 285 ~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~ 363 (481)
T PTZ00377 285 YNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLAS-INLCSNVVGQLMTGLMCNPPREGDASYPLYKRE 363 (481)
T ss_pred ccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhh-eecCCChHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 1368999999998 5999999999996 8999999988764 34578999999999999642 22433
Q ss_pred --HHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecC-CCC---------CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 368 --ELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHT-PFG---------HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 368 --~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+++..++++++.+.+.|+++ |+.+.+++|+||+|+++. +.+ ..++.+++.++++++||.+.||+.|+
T Consensus 364 ~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~ 443 (481)
T PTZ00377 364 RDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFG 443 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccC
Confidence 34456899999999999987 899999999999998753 111 12355677888888999999999884
No 33
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=8.2e-49 Score=403.29 Aligned_cols=345 Identities=24% Similarity=0.401 Sum_probs=282.5
Q ss_pred hHHHHHhhhccccHHHHHHHH-----hhcCCeeEeCCCCC---CCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHH
Q 013883 85 QQVAKRLEKFKTTIFTQMSML-----AIKHGAINLGQGFP---NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIA 156 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~~g~p---~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia 156 (434)
+..++++.....++...+... ..+.++|+|+.|+| ++++|+.+.+++.+++.. ...|++..|.++||++++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia 195 (517)
T PRK13355 117 FKKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD-TEGYSDSKGLFSARKAIM 195 (517)
T ss_pred CChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCcChHHHHHHHH
Confidence 445666655555544433221 23468999999999 577788899888887764 467999999999999999
Q ss_pred HHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHH
Q 013883 157 SRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEEL 235 (434)
Q Consensus 157 ~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l 235 (434)
+++.+.++..++++ +|++|+|+++++.+++.+++++||+|++++|+|+.|...+...|++++.++++++ +|.+|++.+
T Consensus 196 ~~~~~~~~~~~~~~-~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l 274 (517)
T PRK13355 196 QYAQLKGLPNVDVD-DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDI 274 (517)
T ss_pred HHHHhcCCCCCChh-HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHH
Confidence 99987776678888 8999999999999999999999999999999999999999999999999998764 589999999
Q ss_pred HhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC-CCccccCCCCCCCceEEEccCCh
Q 013883 236 KSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASLPGMYERTVTMNSLGK 314 (434)
Q Consensus 236 ~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK 314 (434)
++++++++++|++++||||||.+++.+++++|+++|++||++||+||+|.+|.|++ .+.++..+.. ...+++++||||
T Consensus 275 ~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~-~~~vi~~~S~SK 353 (517)
T PRK13355 275 RSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAP-DLFCVTFSGLSK 353 (517)
T ss_pred HHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCC-CCeEEEEecchh
Confidence 99999999999999999999999999999999999999999999999999999876 3445544422 234678899999
Q ss_pred hhccccceeeeEEeC--hhh----HHHHHHHhhccccCCchHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHhh
Q 013883 315 TFSLTGWKIGWAIAP--PHL----TWGVRQAHSFLTFATSTPMQWAATAALRAP---ETYYEELKRDYSAKKAILVEGLN 385 (434)
Q Consensus 315 ~~g~~G~R~G~~~~~--~~~----~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~---~~~~~~~~~~~~~~~~~l~~~L~ 385 (434)
.|+++|||+||++++ +++ ++.+... ....++.+.++|.++..+|... .+++++. .++.++|+.+.+.|+
T Consensus 354 ~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~~L~ 431 (517)
T PRK13355 354 SHMIAGYRIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYNALN 431 (517)
T ss_pred hccCcccceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 999999999999954 443 3344333 2344678899999999999753 3455554 345567899999999
Q ss_pred hC-CCEeecCCeeEEEeeecCCC--CCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 386 AV-GFKVFPSSGTYFVVVDHTPF--GHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 386 ~~-g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++ |+.+.+++|+||+|+++... +..++.+++.++++++||.++||+.|.
T Consensus 432 ~~~g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~ 483 (517)
T PRK13355 432 AIPGISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFN 483 (517)
T ss_pred cCCCcccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhC
Confidence 88 89999999999999887532 233567888888888999999999883
No 34
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1e-48 Score=393.46 Aligned_cols=324 Identities=27% Similarity=0.469 Sum_probs=279.1
Q ss_pred cCCeeEeCCCCCC----CCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 108 KHGAINLGQGFPN----FDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 108 ~~~~i~l~~g~p~----~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.++|+|++|.|+ +++++.+.+++.++++.+ ...|++..|.++||+++++++.+.+|.+++++ +|++|+|++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~v~it~G~~~a 129 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTD-DIYLTAGCAQA 129 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChh-hEEEeCCHHHH
Confidence 4479999999985 777889999999988764 35799999999999999999999899999998 89999999999
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCH
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTR 261 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~ 261 (434)
+.+++..++++||+|++++|+|+.|...+...|++++.+++.+ +++.+|++.++++++++++++++++||||||.+++.
T Consensus 130 l~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~ 209 (430)
T PLN00145 130 IEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSY 209 (430)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999999764 468999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEe--ChhhHH----
Q 013883 262 EELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA--PPHLTW---- 334 (434)
Q Consensus 262 e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~--~~~~~~---- 334 (434)
+++++|+++|+++|++||+||+|.+|.|++. ..++..+.. .+++++++||||.|+++|||+||+++ ++.++.
T Consensus 210 ~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~ 288 (430)
T PLN00145 210 EHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGE-VAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKV 288 (430)
T ss_pred HHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcc-cCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHH
Confidence 9999999999999999999999999998763 344444443 56899999999999999999999997 344433
Q ss_pred --HHHHHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCEe-ecCCeeEEEeeecCCC--
Q 013883 335 --GVRQAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFKV-FPSSGTYFVVVDHTPF-- 407 (434)
Q Consensus 335 --~l~~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~-- 407 (434)
.++... ....+++.+.|.++..+|++ .+++++++++.++++++.+.+.|++. |+.+ ..|+|+||+|++++..
T Consensus 289 ~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~ 367 (430)
T PLN00145 289 VDSIRNYL-NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCL 367 (430)
T ss_pred HHHHHHHh-cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhc
Confidence 333332 23345678999999999987 46789999999999999999999986 7775 4799999999987531
Q ss_pred -CCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 408 -GHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 408 -~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+..++.+++.+|++++||.+.||+.|.
T Consensus 368 ~~~~~~~~~~~~ll~~~gV~v~pG~~fg 395 (430)
T PLN00145 368 SGIKDDMDFCCKLAKEESVVVLPGSALG 395 (430)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeCccccC
Confidence 222577899999999999999999873
No 35
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-48 Score=388.65 Aligned_cols=322 Identities=33% Similarity=0.576 Sum_probs=287.3
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
++.|+|+.|.|++++++.+.+++.+++.+....|.+..|.++||+++++++.+.+|..++++ +|++|+|+++++.+++.
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~ 111 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVD-NVIVTAGAYEATYLAFE 111 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcc-cEEEeCChHHHHHHHHH
Confidence 57899999999998889999999888877667798889999999999999998888889998 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
+++++||+|++++|+|..+...+...|++++.++++++ ++.+|++.+++.++++++++++++||||||.+++.+++++|
T Consensus 112 ~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l 191 (391)
T PRK08361 112 SLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAI 191 (391)
T ss_pred HhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHH
Confidence 99999999999999999999999999999999999764 57899999999999899999999999999999999999999
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~ 346 (434)
+++|++++++||+||+|.++.+++. ..++..+ ..+++++++||||.+|++|+|+||+++++++++.+...+.....+
T Consensus 192 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~ 269 (391)
T PRK08361 192 ADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKY--APDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIGN 269 (391)
T ss_pred HHHHHHcCeEEEEEcccccceeCCCCCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhccC
Confidence 9999999999999999999987643 2333333 246899999999999999999999999999999888777666778
Q ss_pred CchHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhc
Q 013883 347 TSTPMQWAATAALRAPE--TYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEV 423 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~ 423 (434)
.+.+.|.++..+|++.. ++++++++.++++++.+.+.|+++ |+.+.+++|++|+|+++++.+. ++.+++++|++++
T Consensus 270 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~-~~~~l~~~l~~~~ 348 (391)
T PRK08361 270 VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETGM-SSEDFAEWLLEKA 348 (391)
T ss_pred CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCCC-CHHHHHHHHHHhC
Confidence 88999999999998753 578899999999999999999987 8888899999999999864343 5778999988878
Q ss_pred CeEEECCCCCC
Q 013883 424 GVVAIPTSVFY 434 (434)
Q Consensus 424 GV~v~pG~~F~ 434 (434)
||.+.||+.|+
T Consensus 349 gv~v~pg~~f~ 359 (391)
T PRK08361 349 RVVVIPGTAFG 359 (391)
T ss_pred CEEEcCchhhC
Confidence 99999998874
No 36
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=3.5e-48 Score=388.19 Aligned_cols=325 Identities=24% Similarity=0.451 Sum_probs=280.8
Q ss_pred hcCCeeEeCCCCCC----CCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 107 IKHGAINLGQGFPN----FDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 107 ~~~~~i~l~~g~p~----~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
.+.++|+|++|.|+ +++++.+.+++.+++.+. ...|.+..|.++||+++++++++.+|..++++ +|++|+|+++
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~ 107 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLD-DVFITSGCTQ 107 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcc-cEEEeCChHH
Confidence 44589999999998 788999999999888764 46899999999999999999999889999998 8999999999
Q ss_pred HHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCC
Q 013883 182 AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFT 260 (434)
Q Consensus 182 ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~ 260 (434)
++..++.+++++||+|++++|+|+.|...+...|++++.+++++ +++.+|++.++++++++++++++++||||||.+++
T Consensus 108 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s 187 (409)
T PLN02656 108 AIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYS 187 (409)
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999964 46789999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeC--------hh
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP--------PH 331 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~--------~~ 331 (434)
.+++++|+++|++||++||+||+|.+|.|++. ..++..+. ..+++++++||||.|+++|+|+||++++ ++
T Consensus 188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~ 266 (409)
T PLN02656 188 YQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFG-SIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPK 266 (409)
T ss_pred HHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhc-ccCcEEEEcccchhccCcceeEEEEEEeCcccccccHH
Confidence 99999999999999999999999999998763 23433342 2468999999999999999999999984 57
Q ss_pred hHHHHHHHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCC-CE-eecCCeeEEEeeecCCC-
Q 013883 332 LTWGVRQAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVG-FK-VFPSSGTYFVVVDHTPF- 407 (434)
Q Consensus 332 ~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~-~~~~~~~~~~~~~~~~~- 407 (434)
+++.+.+.... ..+++.+.|.++..+|++ .++++++.+++++++++.+.+.|++++ +. +.+++|++|+|++++..
T Consensus 267 ~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~ 345 (409)
T PLN02656 267 IVERIKKYFDI-LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSL 345 (409)
T ss_pred HHHHHHHHHhh-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhh
Confidence 88888776543 346788999999999985 367899999999999999999999874 33 35789999999997421
Q ss_pred --CCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 408 --GHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 408 --~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+..++.+++.++++++||.+.||+.|.
T Consensus 346 ~~~~~~~~~~~~~~l~~~gV~v~pg~~fg 374 (409)
T PLN02656 346 LEDISDDIDFCFKLAREESVIILPGTAVG 374 (409)
T ss_pred cCCCCCHHHHHHHHHHhCCEEEecchhcC
Confidence 122355777777788899999999873
No 37
>PLN02231 alanine transaminase
Probab=100.00 E-value=2.4e-48 Score=397.59 Aligned_cols=342 Identities=21% Similarity=0.376 Sum_probs=283.3
Q ss_pred HHhhhccccHHHHHHHHhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHc--C--CCCCCCCCCcHHHHHHHHHHHHhhcC
Q 013883 89 KRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRD--G--KNQYARGHGVPEFNSAIASRFKKDSG 164 (434)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~--~--~~~Y~~~~G~~~lr~~ia~~l~~~~g 164 (434)
+.+.+.+...++++..+...++.|+|+.+.+.++. .+.+.+.+.+.+ + ...|++..|.++||+++++++.+++|
T Consensus 109 ~~~~~~~~~~~r~v~~~~~~p~~i~~~~~~~~fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g 186 (534)
T PLN02231 109 QSLGQQPITFFREVLALCDHPSLLDKSETHGLFSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDG 186 (534)
T ss_pred HHcCCCccHHHHHHHHhccCCccCCCCCccccCCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccC
Confidence 34556667777888888888899999988777766 444444455554 2 46799999999999999999999999
Q ss_pred CCCCCCCcEEEcCChHHHHHHHHHHccC-CCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhccc-
Q 013883 165 LEVDPEKEVTVTSGCTEAIAATILGLIN-PGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISK- 241 (434)
Q Consensus 165 ~~~~~~~~i~~t~G~~~ai~~~~~~l~~-~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~- 241 (434)
.+++++ +|++|+|+++++.+++..++. +||.|+++.|+|+.|...+...|++++.++++++ +|++|++.|++++++
T Consensus 187 ~~~~pe-~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~ 265 (534)
T PLN02231 187 FPADPN-DIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDA 265 (534)
T ss_pred CCCCcc-cEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHH
Confidence 999999 899999999999999999984 8999999999999999999999999999999863 589999999998865
Q ss_pred -----CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC--CCccccCCCC------CCCceEE
Q 013883 242 -----NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM--DHISIASLPG------MYERTVT 308 (434)
Q Consensus 242 -----~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~--~~~~~~~~~~------~~~~~i~ 308 (434)
++|++++++||||||.+++.+++++|+++|++||++||+||+|.++.|++ .+.++..+.. ...++++
T Consensus 266 ~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~ 345 (534)
T PLN02231 266 RSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVS 345 (534)
T ss_pred hhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEE
Confidence 68999999999999999999999999999999999999999999999953 2334443321 1236899
Q ss_pred EccCChhh-ccccceeeeEEe---ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC-------hH---HHHHHHHHHH
Q 013883 309 MNSLGKTF-SLTGWKIGWAIA---PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP-------ET---YYEELKRDYS 374 (434)
Q Consensus 309 i~S~SK~~-g~~G~R~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~-------~~---~~~~~~~~~~ 374 (434)
++||||.+ |++|+|+||+++ ++++++++.+... ...+.+.+.|.++..+++.+ ++ +.+++++.|+
T Consensus 346 l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~ 424 (534)
T PLN02231 346 FQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLA 424 (534)
T ss_pred EeccCcccccCCccceEEEEEecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 99999976 899999999986 6889998887765 45677888999999999642 22 2335678999
Q ss_pred HHHHHHHHHhhhC-CCEeecCCeeEEEeeecC-CCC---------CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 375 AKKAILVEGLNAV-GFKVFPSSGTYFVVVDHT-PFG---------HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 375 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++++.+.+.|+++ |+.+.+++|+||+|+++. +.. ..++..++.+|++++||.++||+.|+
T Consensus 425 ~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg 495 (534)
T PLN02231 425 RRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFG 495 (534)
T ss_pred HHHHHHHHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccC
Confidence 9999999999987 899999999999996542 111 12345577889988999999999985
No 38
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=4.5e-48 Score=387.90 Aligned_cols=326 Identities=24% Similarity=0.442 Sum_probs=280.2
Q ss_pred hhcCCeeEeCCCCCC----CCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhc------CCCCCCCCcEE
Q 013883 106 AIKHGAINLGQGFPN----FDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDS------GLEVDPEKEVT 174 (434)
Q Consensus 106 ~~~~~~i~l~~g~p~----~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~------g~~~~~~~~i~ 174 (434)
..+++.|+|+.|.|+ +.+++.+.+++.+.+... ...|++..|.++||+++++++++.+ |..++++ +|+
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~-~i~ 108 (412)
T PTZ00433 30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKD-NVV 108 (412)
T ss_pred CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChh-hEE
Confidence 356689999999987 457888999888877653 4689999999999999999998754 4668888 899
Q ss_pred EcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCC
Q 013883 175 VTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHN 253 (434)
Q Consensus 175 ~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~N 253 (434)
+|+|+++++.+++.+++++||+|++++|+|..+...++..|++++.+++++ .++++|++.+++++++++++|++++|||
T Consensus 109 it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~N 188 (412)
T PTZ00433 109 LCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSN 188 (412)
T ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCC
Confidence 999999999999999999999999999999999999999999999999975 4689999999999988999999999999
Q ss_pred CcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEe--C-
Q 013883 254 PTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA--P- 329 (434)
Q Consensus 254 PTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~--~- 329 (434)
|||.+++.+++++|+++|++||++||+||+|.+|.+++. ..++..+.. ..++++++||||.||++|+|+||+++ +
T Consensus 189 PtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~ 267 (412)
T PTZ00433 189 PCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDT-TVPRVILGGTAKNLVVPGWRLGWLLLVDPH 267 (412)
T ss_pred CCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccC-CCceEEEccchhhcCCCCeeEEEEEEeCCc
Confidence 999999999999999999999999999999999988753 234445533 23589999999999999999999997 2
Q ss_pred ---hhhHHHHHHHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeec
Q 013883 330 ---PHLTWGVRQAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDH 404 (434)
Q Consensus 330 ---~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 404 (434)
+++++.++.... ..++.+.+.|.++..+|.+ .++++++.++.++++++.+.+.|++. |+.+.++++++|+|+++
T Consensus 268 ~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l 346 (412)
T PTZ00433 268 GNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRL 346 (412)
T ss_pred ccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEe
Confidence 456666666543 3467899999999999986 46889999999999999999999885 78888999999999987
Q ss_pred CCC---CCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 405 TPF---GHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 405 ~~~---~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+.. +..++.+++++|++++||.+.||+.|+
T Consensus 347 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~ 379 (412)
T PTZ00433 347 DLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFH 379 (412)
T ss_pred chhhcCCCCCHHHHHHHHHHhcCEEEeCccccC
Confidence 431 122467899999887899999999883
No 39
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=6e-48 Score=385.65 Aligned_cols=324 Identities=30% Similarity=0.528 Sum_probs=281.7
Q ss_pred cCCeeEeCCCCC---CCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFP---NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p---~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+.++|+|+.|.| ++++++.+.+++.+++.+....|++..|.++||+++++++++.+|+.++++ +|++|+|+++++.
T Consensus 29 ~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~it~G~~~al~ 107 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPD-DVRVTAAVTEALQ 107 (398)
T ss_pred CCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChh-hEEEeCCHHHHHH
Confidence 457899999999 678889999999888876656799899999999999999999999999998 8999999999999
Q ss_pred HHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEE-EcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHH
Q 013883 185 ATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCI-TLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREE 263 (434)
Q Consensus 185 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~ 263 (434)
+++.+++++||+|++++|+|..+...++..|++++.+ +.+++++.+|++.+++++++++++|++++||||||.+++.++
T Consensus 108 ~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~ 187 (398)
T PRK08363 108 LIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKT 187 (398)
T ss_pred HHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHH
Confidence 9999999999999999999999999999999999888 455556789999999999888999999999999999999999
Q ss_pred HHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEe--ChhhHHHHHHHhh
Q 013883 264 LNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA--PPHLTWGVRQAHS 341 (434)
Q Consensus 264 l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~--~~~~~~~l~~~~~ 341 (434)
+++|+++|+++|+++|+||+|.++.+++...++..+.. .+++++++||||.|+++|+|+||+++ ++++++.+.....
T Consensus 188 ~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~ 266 (398)
T PRK08363 188 LKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTK-DVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAID 266 (398)
T ss_pred HHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCc-CCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHH
Confidence 99999999999999999999999988765545555543 45799999999999999999999997 6777666554332
Q ss_pred c---cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHH
Q 013883 342 F---LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCE 417 (434)
Q Consensus 342 ~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (434)
. ..++.+.+.|.++..+|.+.++++++.+++++++++.+.+.|+++ |+.+.+++|+||+|+++++....++.+++.
T Consensus 267 ~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~~~~ 346 (398)
T PRK08363 267 KLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWKDDKEFVL 346 (398)
T ss_pred HHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCCCHHHHHH
Confidence 1 246789999999999998767899999999999999999999887 888888999999998875421224667877
Q ss_pred HHHHhcCeEEECCCCC
Q 013883 418 YLIKEVGVVAIPTSVF 433 (434)
Q Consensus 418 ~Ll~~~GV~v~pG~~F 433 (434)
++++++||.+.||+.|
T Consensus 347 ~~l~~~gV~v~~g~~f 362 (398)
T PRK08363 347 DVLHEAHVLFVHGSGF 362 (398)
T ss_pred HHHHhCCEEEeCchhh
Confidence 7778889999999987
No 40
>PRK07324 transaminase; Validated
Probab=100.00 E-value=2.5e-48 Score=384.62 Aligned_cols=316 Identities=27% Similarity=0.360 Sum_probs=281.8
Q ss_pred hcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 107 IKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 107 ~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
.+.++++|+.|+|+++.++.+ +++.+++.+....|++..|.++||+++++++.+ ++++ +|++|+|+++++.++
T Consensus 24 ~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~-----~~~~-~vi~t~G~~~al~~~ 96 (373)
T PRK07324 24 AESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQN-----VKPE-NILQTNGATGANFLV 96 (373)
T ss_pred ccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhcC-----CChh-hEEEcCChHHHHHHH
Confidence 345899999999999988888 888888887777999999999999999999862 5677 899999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+.+++++||+|+++.|+|..+...++..|++++.+|+++ .++.+|++.+++++++++|+|++++||||||.+++.++++
T Consensus 97 ~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~ 176 (373)
T PRK07324 97 LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLE 176 (373)
T ss_pred HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHH
Confidence 999999999999999999999999999999999999976 3577899999999988999999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTF 345 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~ 345 (434)
+|+++|++||++||+||+|.++.+++...++.. ..+++|+++||||.+|++|+|+||+++++++++++++.+....+
T Consensus 177 ~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~---~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~ 253 (373)
T PRK07324 177 EIVEIARSVDAYVLSDEVYRPLDEDGSTPSIAD---LYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYTMI 253 (373)
T ss_pred HHHHHHHHCCCEEEEEccccccccCCCCCChhh---ccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcEEe
Confidence 999999999999999999999988654333333 35688999999999999999999999999999999998887778
Q ss_pred CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcC
Q 013883 346 ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVG 424 (434)
Q Consensus 346 ~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~G 424 (434)
+.+.+.|.++..+|++.+.+++++++.++++++.+.+.|++. ++.+..|+++++.|+.+.. +. ++.+|+++|++++|
T Consensus 254 ~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~-~~-~~~~~~~~ll~~~g 331 (373)
T PRK07324 254 CAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDV-DM-PSEDFCLKLLKETG 331 (373)
T ss_pred cCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCC-CC-CHHHHHHHHHHhcC
Confidence 889999999999998777789999999999999999999886 7888889999888887743 22 57899999998889
Q ss_pred eEEECCCCCC
Q 013883 425 VVAIPTSVFY 434 (434)
Q Consensus 425 V~v~pG~~F~ 434 (434)
|.+.||+.|+
T Consensus 332 v~v~pg~~F~ 341 (373)
T PRK07324 332 VLLVPGNRFD 341 (373)
T ss_pred EEEECccccC
Confidence 9999999884
No 41
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.6e-47 Score=382.86 Aligned_cols=322 Identities=26% Similarity=0.445 Sum_probs=275.2
Q ss_pred CCeeEeCCCCCC----CCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 109 HGAINLGQGFPN----FDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 109 ~~~i~l~~g~p~----~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
.+.++|+.|.|+ +++++.+.+++.+++.+. ...|.+..|.++||+++++++++. +..++++ +|++|+|+++++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~~~-~i~~t~G~~~al 108 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIEAD-DVVLCSGCSHAI 108 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCCHH-HEEECcChHHHH
Confidence 467999999985 778888999988887764 357999999999999999999864 5568888 899999999999
Q ss_pred HHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHH
Q 013883 184 AATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTRE 262 (434)
Q Consensus 184 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e 262 (434)
.+++.+++++||+|++++|+|..|...++..|++++.++++.+ ++++|++.++++++++++++++++||||||.+++.+
T Consensus 109 ~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~ 188 (401)
T TIGR01264 109 EMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQ 188 (401)
T ss_pred HHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999999998753 589999999999988899999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeCh------hhHHH
Q 013883 263 ELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP------HLTWG 335 (434)
Q Consensus 263 ~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~------~~~~~ 335 (434)
++++|+++|+++|++||+||+|.+|.+++. ..++..+.. ..++|+++||||.|+++|+|+||+++++ ++++.
T Consensus 189 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~ 267 (401)
T TIGR01264 189 HLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSS-TVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDG 267 (401)
T ss_pred HHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCC-CCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHH
Confidence 999999999999999999999999988753 334444432 2358999999999999999999999874 34444
Q ss_pred HHHHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCC---CCC
Q 013883 336 VRQAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPF---GHE 410 (434)
Q Consensus 336 l~~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~---~~~ 410 (434)
++.... ..++++.+.|.++..+|.+ .+++++++++.++++++.+.+.|+++ |+.+..+++|+|+|+++... +..
T Consensus 268 ~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~ 346 (401)
T TIGR01264 268 LVKLSQ-RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFK 346 (401)
T ss_pred HHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCC
Confidence 444432 2467789999999999975 36789999999999999999999988 78877899999999997531 122
Q ss_pred CHHHHHHHHHHhcCeEEECCCCCC
Q 013883 411 TDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 411 ~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++.+++++|++++||.+.||+.|.
T Consensus 347 ~~~~~~~~l~~~~gI~v~pg~~f~ 370 (401)
T TIGR01264 347 NDVEFTERLVAEQSVFCLPGSCFE 370 (401)
T ss_pred CHHHHHHHHHHhCCEEEeCchhcC
Confidence 467899998878899999999873
No 42
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.2e-47 Score=377.07 Aligned_cols=317 Identities=26% Similarity=0.436 Sum_probs=279.6
Q ss_pred eeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc
Q 013883 111 AINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL 190 (434)
Q Consensus 111 ~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l 190 (434)
.++|+.|.|++++++.+.+++.+... ....|++..|.++||+++++++.+.+|+.++++++|++|+|+++++..++..+
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~ 80 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVF 80 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHH
Confidence 57999999999989999999888765 35679999999999999999999999998888657999999999999999999
Q ss_pred cCCC---CeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 191 INPG---DEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 191 ~~~g---d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
+++| |+|+++.|+|..|...++..|++++.+++++ .++.+|++.++++++++++++++++||||||.+++.+++++
T Consensus 81 ~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~ 160 (350)
T TIGR03537 81 IDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKE 160 (350)
T ss_pred cCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHH
Confidence 9887 6999999999999999999999999999974 46789999999999889999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~ 346 (434)
|+++|++||++||+||+|..+.+++...++..+ ..++++++.||||.+|++|+|+||++++++++++++..+.....+
T Consensus 161 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
T TIGR03537 161 TIAMCREHGIILCSDECYTEIYFGEPPHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFGVA 238 (350)
T ss_pred HHHHHHHcCcEEEEeccccccccCCCCCchhhc--CcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhhccC
Confidence 999999999999999999998776543333333 357899999999999999999999999999999998887666667
Q ss_pred CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 347 TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
.+...|.++..+|.+ ++++++.+.+++++++.+.+.|++.|+++.++++++|+|++++. + .++.+++++|++ +||.
T Consensus 239 ~~~~~q~~~~~~l~~-~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~~~~~~~~-~-~~~~~l~~~L~~-~gv~ 314 (350)
T TIGR03537 239 SPDFVQAAAKAAWSD-DNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYLWVKVPS-G-IDAKDYALRLLE-NGIV 314 (350)
T ss_pred CCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEEEEEECCC-C-CCHHHHHHHHHH-CCEE
Confidence 777788888888875 56888889999999999999999999998899999999998853 2 257789999876 5999
Q ss_pred EECCCCCC
Q 013883 427 AIPTSVFY 434 (434)
Q Consensus 427 v~pG~~F~ 434 (434)
|.||..|.
T Consensus 315 v~~g~~f~ 322 (350)
T TIGR03537 315 VAPGENFG 322 (350)
T ss_pred EcCchhhC
Confidence 99999873
No 43
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-48 Score=390.51 Aligned_cols=315 Identities=18% Similarity=0.215 Sum_probs=258.6
Q ss_pred CCeeEeCCCCC-CCCCcHHHHHHHHHHH----H-cCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEE--EcCChH
Q 013883 109 HGAINLGQGFP-NFDGPDFVKDAAIQAI----R-DGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVT--VTSGCT 180 (434)
Q Consensus 109 ~~~i~l~~g~p-~~~~~~~v~~~~~~~~----~-~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~--~t~G~~ 180 (434)
+++|||+.|.| +++++..+.+.+.+++ . ....+|.+..|+++||+++++++.+..+..++++ +|+ .|.|++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~-~v~~~~t~G~~ 107 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEK-RIATVQALSGT 107 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccC-eEEEeeccCcc
Confidence 47899999986 5666666666666654 2 2347899999999999999999987776777888 788 589999
Q ss_pred HHHHHHHH---HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcc---cCCcEEEecCCCC
Q 013883 181 EAIAATIL---GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTIS---KNTRAILMNTPHN 253 (434)
Q Consensus 181 ~ai~~~~~---~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~---~~~~~i~~~~p~N 253 (434)
+++.+++. ++++|||+|++++|+|+.|...++..|++++.+|+.+ +++++|++.++++++ ++++++++++|||
T Consensus 108 ~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~N 187 (404)
T PTZ00376 108 GALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHN 187 (404)
T ss_pred hHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 99888764 6789999999999999999999999999999999954 468999999999885 3467778899999
Q ss_pred CcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC---CCccccCCCCCCCceEEEccCChhhccccceeeeE---E
Q 013883 254 PTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM---DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWA---I 327 (434)
Q Consensus 254 PTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~---~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~---~ 327 (434)
|||.+++.+++++|+++|++|+++||+||+|.+|.+++ ...++..+....+++++++||||.|+++|+|+||+ +
T Consensus 188 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~ 267 (404)
T PTZ00376 188 PTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVC 267 (404)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEe
Confidence 99999999999999999999999999999999998864 12233444444568999999999999999999998 5
Q ss_pred eChhhHHHH----HHHhhccccCCchHHHHHHHHHHhCCh---HH---HHHHHHHHHHHHHHHHHHhhhCC----CEeec
Q 013883 328 APPHLTWGV----RQAHSFLTFATSTPMQWAATAALRAPE---TY---YEELKRDYSAKKAILVEGLNAVG----FKVFP 393 (434)
Q Consensus 328 ~~~~~~~~l----~~~~~~~~~~~~~~~q~a~~~~L~~~~---~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~ 393 (434)
+++++++.+ .+.......+.+.+.|.++..+|++.+ +| +++++++++++|+.+.+.|++.+ |.+.+
T Consensus 268 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~ 347 (404)
T PTZ00376 268 ANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHII 347 (404)
T ss_pred CCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc
Confidence 687755543 333333445567889999999998742 33 56677899999999999999874 56678
Q ss_pred CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 394 SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
++||||+|+++ +.+++++|++++||.+.||.
T Consensus 348 p~gg~f~~~~~-------~~~~~~~L~~~~~v~v~p~~ 378 (404)
T PTZ00376 348 NQIGMFSFTGL-------TKEQVERLIEKYHIYLLDNG 378 (404)
T ss_pred cCceEEEecCC-------CHHHHHHHHHhCCEeecCCC
Confidence 89999999986 35899999999999999983
No 44
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.2e-47 Score=384.51 Aligned_cols=317 Identities=24% Similarity=0.357 Sum_probs=268.5
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHc-----CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRD-----GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+++.++|+.|.|++++++.+.+++.+++.+ ....|.+..|.++||+++++++.+.+|..++++ +|++|+|++++
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~-~I~it~Ga~~a 111 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISAD-EIFISDGAKCD 111 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChh-hEEECCCHHHH
Confidence 347899999999999999999999888765 346799999999999999999988899999998 89999999999
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCE-----------EEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecC
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAK-----------IKCITLRPP-DFAIPIEELKSTISKNTRAILMNT 250 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~-----------~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~ 250 (434)
+.+++ .++++||+|++++|+|+.|...++..|.+ ++.++++++ ++.+|++ .+++++|++++
T Consensus 112 l~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~------~~~~k~i~l~n 184 (409)
T PRK07590 112 TGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP------EEKVDIIYLCF 184 (409)
T ss_pred HHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc------ccCceEEEEeC
Confidence 99864 56789999999999999999999999997 888998743 3545532 25789999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeC
Q 013883 251 PHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 251 p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
||||||.+++.+++++|+++|++||++||+||+|.+|.+++. ..++..++...+++|+++||||.+|++|+|+||++++
T Consensus 185 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~ 264 (409)
T PRK07590 185 PNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP 264 (409)
T ss_pred CCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcC
Confidence 999999999999999999999999999999999999988654 2345555444467999999999999999999999999
Q ss_pred hhhHHHH------------HHHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCe
Q 013883 330 PHLTWGV------------RQAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSG 396 (434)
Q Consensus 330 ~~~~~~l------------~~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 396 (434)
+++++.+ .........+.+.+.|.++..+|.+ ..++++++++.++++++.+.+.|++.|+.+.++++
T Consensus 265 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~g 344 (409)
T PRK07590 265 KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAGFEVYGGVN 344 (409)
T ss_pred HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCc
Confidence 9988621 1112212235788999999999975 45788999999999999999999999988888899
Q ss_pred eEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 397 TYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++|+|+++++ +. ++.+++.+|++++||.+.||+.|+
T Consensus 345 ~~f~wi~~~~-~~-~~~~~~~~l~~~~gv~v~pg~~f~ 380 (409)
T PRK07590 345 APYIWVKTPD-GM-SSWDFFDKLLQEANVVGTPGSGFG 380 (409)
T ss_pred ceEEEEECCC-CC-CHHHHHHHHHHHCCEEEeChhHhC
Confidence 9999999854 22 467889889888899999998873
No 45
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-48 Score=391.57 Aligned_cols=317 Identities=23% Similarity=0.359 Sum_probs=259.0
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhh-cCCCCCC--CCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKD-SGLEVDP--EKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~-~g~~~~~--~~~i~~t~G~~~ai~~~ 186 (434)
++|||++|.|++++++.+.+.+ +++. + ..|+++.|.++||+++++++.+. .+....+ +++|++|+|+++++..+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~-~~~~-~-~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~ 177 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELV-DGII-G-DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYI 177 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHH-HHHh-c-CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 5799999999999999999855 4443 2 35999999999999999966543 3332222 23899999999999999
Q ss_pred HHH-----ccCCCCeEEEcCCCchhHHHHHHHcCC--EEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccC
Q 013883 187 ILG-----LINPGDEVILFAPFYDSYEATLSMAGA--KIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258 (434)
Q Consensus 187 ~~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~G~--~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~ 258 (434)
+.+ +++|||+|++++|+|+.|..++...|. +++.++.++ .+|++|++.+++++++++|+|++++||||||.+
T Consensus 178 ~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v 257 (527)
T PRK09275 178 FDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVA 257 (527)
T ss_pred HHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCC
Confidence 886 689999999999999999999888754 555555554 458999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHH--cCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh-----
Q 013883 259 FTREELNVIASLCIE--NDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH----- 331 (434)
Q Consensus 259 ~~~e~l~~i~~la~~--~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~----- 331 (434)
++.+++++|+++|++ +|++||+||+|..|.+ .+.++... .++++++++||||.||++|||+||++++++
T Consensus 258 ~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~s~~~~--~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~ 333 (527)
T PRK09275 258 MSDESLEKIADIVNEKRPDLMIITDDVYGTFVD--DFRSLFAV--LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDK 333 (527)
T ss_pred CCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc--cccCHHHh--CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHH
Confidence 999999999999965 4999999999999874 33343333 357999999999999999999999999976
Q ss_pred hHHHH--------------------------------HHHhhccccCCchHHHHHH-----HHHHhCChHHHHHHHHHHH
Q 013883 332 LTWGV--------------------------------RQAHSFLTFATSTPMQWAA-----TAALRAPETYYEELKRDYS 374 (434)
Q Consensus 332 ~~~~l--------------------------------~~~~~~~~~~~~~~~q~a~-----~~~L~~~~~~~~~~~~~~~ 374 (434)
+++.+ +++....+.+.+.+.|.++ .++|+..+++.+++++.++
T Consensus 334 ~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~ 413 (527)
T PRK09275 334 LIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIR 413 (527)
T ss_pred HHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 33222 5666677889999999873 3456666788999999999
Q ss_pred HHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCC--------------CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 375 AKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFG--------------HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 375 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+|++.+.+.|. .++...+++|+||+|+++...+ ..++.+|+.+|++++||.+.||+.|+
T Consensus 414 ~Rr~~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg 486 (527)
T PRK09275 414 RRYKALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFG 486 (527)
T ss_pred HHHHHHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhC
Confidence 99999988883 3444467999999999985431 12578999999999999999999984
No 46
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=7.6e-47 Score=376.26 Aligned_cols=324 Identities=25% Similarity=0.392 Sum_probs=283.8
Q ss_pred hcCCeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 107 IKHGAINLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 107 ~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
.+.+.++|+.|.|++++++.+.+++.+.+.+ ....|.+..|.++||+++++++.+.+|..++++ +|++|+|+++++..
T Consensus 27 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~ 105 (386)
T PRK07550 27 ADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPE-QVHITSGCNQAFWA 105 (386)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc-eEEEecCcHHHHHH
Confidence 3457899999999988888999988887754 346799989999999999999999999989888 89999999999999
Q ss_pred HHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHH
Q 013883 186 TILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 186 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
++.+++++||+|++++|+|..+...++..|++++.+++++ .++.+|++.+++++++++++|++++||||||.+++.+++
T Consensus 106 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~ 185 (386)
T PRK07550 106 AMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELL 185 (386)
T ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHH
Confidence 9999999999999999999999999999999999999975 467789999999999899999999999999999999999
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCCC-ccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMDH-ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 343 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~ 343 (434)
++|+++|++||++||+||+|.+|.+++.. ..+....+..++++++.||||.+|++|+|+||+++++++++.+.......
T Consensus 186 ~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~ 265 (386)
T PRK07550 186 HELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEKFMDTV 265 (386)
T ss_pred HHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHHHHhhc
Confidence 99999999999999999999998765322 22222223356899999999999999999999999999999988887777
Q ss_pred ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHh
Q 013883 344 TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKE 422 (434)
Q Consensus 344 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 422 (434)
..+++.+.|.++..+|.+.++|++++++.++++++.+.+.|++. ++.+ .+.+++|+|+++...+. ++.+++++|+++
T Consensus 266 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~g~~~~~~~~~~~~~-~~~~l~~~l~~~ 343 (386)
T PRK07550 266 AICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWEL-LASGAYFAYVRHPFPDR-PSREVARRLAKE 343 (386)
T ss_pred ccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcee-CCCceEEEEecCCCCCC-CHHHHHHHHHHh
Confidence 78889999999999998767888999999999999999999886 6765 46689999998753233 578999998888
Q ss_pred cCeEEECCCCC
Q 013883 423 VGVVAIPTSVF 433 (434)
Q Consensus 423 ~GV~v~pG~~F 433 (434)
+||.+.||+.|
T Consensus 344 ~gv~v~pg~~f 354 (386)
T PRK07550 344 AGILCLPGTMF 354 (386)
T ss_pred cCEEEeCchhh
Confidence 89999999877
No 47
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=4.8e-47 Score=378.64 Aligned_cols=324 Identities=25% Similarity=0.438 Sum_probs=281.3
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
++++++|+.|.|+...++.+.+.+.+.+.+ ....|++..|.++||+++++++.+.+|..++++++|++|+|+++++..+
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~ 107 (395)
T PRK08175 28 GEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHL 107 (395)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHH
Confidence 357899999999988888787777776654 3478999999999999999999988898888764699999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc---cCCcEEEecCCCCCcccCCCHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS---KNTRAILMNTPHNPTGKMFTREE 263 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~---~~~~~i~~~~p~NPTG~~~~~e~ 263 (434)
+..+++|||+|++++|+|+.+...+...|++++.+++++++ .+++.++++++ +++++|++++||||||.+++.++
T Consensus 108 ~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~--~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~ 185 (395)
T PRK08175 108 MLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGV--DFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEF 185 (395)
T ss_pred HHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCC--CcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHH
Confidence 99999999999999999999999999999999999997532 24778887776 37899999999999999999999
Q ss_pred HHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhc
Q 013883 264 LNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSF 342 (434)
Q Consensus 264 l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~ 342 (434)
+++|+++|++||++||+||+|.++.+++. ..++..++...+++++++||||.||++|+|+||+++++++++++.+.+..
T Consensus 186 ~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~~ 265 (395)
T PRK08175 186 FEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSY 265 (395)
T ss_pred HHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHHHhh
Confidence 99999999999999999999999988653 23444444335678999999999999999999999999999999888876
Q ss_pred cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCC-CCCHHHHHHHHHH
Q 013883 343 LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFG-HETDIAFCEYLIK 421 (434)
Q Consensus 343 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ll~ 421 (434)
..++.+.+.|.++..+|.+.+++++++++.++++++.+.+.|++.|+.+.++++++|+|+++++.. ..++.+++++|++
T Consensus 266 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~ 345 (395)
T PRK08175 266 HDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLN 345 (395)
T ss_pred cccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHH
Confidence 678888889999999998777889999999999999999999999998888999999999986421 1146789988888
Q ss_pred hcCeEEECCCCC
Q 013883 422 EVGVVAIPTSVF 433 (434)
Q Consensus 422 ~~GV~v~pG~~F 433 (434)
++||.|.||+.|
T Consensus 346 ~~gv~v~p~~~f 357 (395)
T PRK08175 346 EAKVCVSPGIGF 357 (395)
T ss_pred hCCEEEeCchhh
Confidence 889999999877
No 48
>PLN02368 alanine transaminase
Probab=100.00 E-value=6.1e-48 Score=383.45 Aligned_cols=295 Identities=19% Similarity=0.374 Sum_probs=251.2
Q ss_pred cCCeeEeCCCCCC--------C----------------------CCcHHHHHHHHHHHHc--CCCCCCCCCCcHHHHHHH
Q 013883 108 KHGAINLGQGFPN--------F----------------------DGPDFVKDAAIQAIRD--GKNQYARGHGVPEFNSAI 155 (434)
Q Consensus 108 ~~~~i~l~~g~p~--------~----------------------~~~~~v~~~~~~~~~~--~~~~Y~~~~G~~~lr~~i 155 (434)
+.++|+|++|+|+ + .+++.+.++....... ....|++..|.++||+++
T Consensus 37 g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~ai 116 (407)
T PLN02368 37 GKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEV 116 (407)
T ss_pred hhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHH
Confidence 3478999999996 3 1455565555432222 356899999999999999
Q ss_pred HHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc-CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHH
Q 013883 156 ASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI-NPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIE 233 (434)
Q Consensus 156 a~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~ 233 (434)
++++.+.+|..++++ +|++|+|+++++..++.+++ ++||+|++++|+|+.|...+...|++++.+++++ ++|++|++
T Consensus 117 a~~~~~~~g~~~~~~-~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~ 195 (407)
T PLN02368 117 AEFIERRDGYPSDPE-LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVN 195 (407)
T ss_pred HHHHHHhcCCCCChh-hEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHH
Confidence 999998889989998 89999999999999999987 7999999999999999999999999999999975 35899999
Q ss_pred HHHhhccc------CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC--CccccCCC-----
Q 013883 234 ELKSTISK------NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD--HISIASLP----- 300 (434)
Q Consensus 234 ~l~~~i~~------~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~--~~~~~~~~----- 300 (434)
.+++++++ +++++++++||||||.+++.+++++|+++|++||++||+||+|.++.|++. +.++..+.
T Consensus 196 ~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~ 275 (407)
T PLN02368 196 NLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGP 275 (407)
T ss_pred HHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcc
Confidence 99999864 689999999999999999999999999999999999999999999998763 33433221
Q ss_pred --CCCCceEEEccCChhh-ccccceeeeEE---eChhhHHHHHHHhhccccCCchHHHHHHHHHHhCCh-------HHH-
Q 013883 301 --GMYERTVTMNSLGKTF-SLTGWKIGWAI---APPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPE-------TYY- 366 (434)
Q Consensus 301 --~~~~~~i~i~S~SK~~-g~~G~R~G~~~---~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~-------~~~- 366 (434)
...+++|+++||||.| |++|||+||++ +++++++.+.+... ..++++.+.|.++..+|+.++ ++.
T Consensus 276 ~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~-~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~ 354 (407)
T PLN02368 276 PISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS-IALSPNVSGQIFMGLMVNPPKPGDISYDQFVR 354 (407)
T ss_pred cccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc-ccCCCCcHHHHHHHHHhCCCCCCCccHHHHHH
Confidence 1135899999999998 89999999999 48899998888753 467889999999999998542 234
Q ss_pred --HHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeec
Q 013883 367 --EELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDH 404 (434)
Q Consensus 367 --~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 404 (434)
+++++.|++||+.+.+.|+++ |+.+.+|+|+||+|+++
T Consensus 355 ~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i 395 (407)
T PLN02368 355 ESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQI 395 (407)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCC
Confidence 456899999999999999997 99999999999999876
No 49
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-46 Score=376.47 Aligned_cols=326 Identities=36% Similarity=0.707 Sum_probs=288.8
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
..+.++|+.|+|++++++.+.+++.+.+.+....|++..|..+||+++++++.+.+|..++++ +|++|+|+++++..++
T Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a~~~~~ 108 (393)
T PRK05764 30 GRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPS-QVIVTTGAKQALYNAF 108 (393)
T ss_pred cCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHH-HEEEeCCcHHHHHHHH
Confidence 347899999999999889999999888876666799999999999999999998888888888 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
.+++++||.|++++|+|..+..+++..|++++.++.++ .++.+|++.++++++++++++++++||||||.+++.+++++
T Consensus 109 ~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~ 188 (393)
T PRK05764 109 MALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEA 188 (393)
T ss_pred HHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999999975 35789999999999888999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCC-CccccCC-CCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMD-HISIASL-PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT 344 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~-~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~ 344 (434)
|+++|++||+++|+||+|.++.+++. ..++..+ .+..+++++++||||.+|++|+|+||+++++++++++........
T Consensus 189 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~~~ 268 (393)
T PRK05764 189 IADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSHST 268 (393)
T ss_pred HHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHHHhhcc
Confidence 99999999999999999999988653 2344444 334578999999999999999999999999999999988877667
Q ss_pred cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCC---CHHHHHHHHH
Q 013883 345 FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHE---TDIAFCEYLI 420 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Ll 420 (434)
.+++.+.|.++..+|+..+++++++++.++++++.+.+.|+++ |+.+.+++|++|+|+++.+.... ++.+++++|+
T Consensus 269 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~ 348 (393)
T PRK05764 269 SNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALL 348 (393)
T ss_pred cCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccccccCCHHHHHHHHH
Confidence 7889999999999998556788899999999999999999998 99988999999999987542111 2578888988
Q ss_pred HhcCeEEECCCCCC
Q 013883 421 KEVGVVAIPTSVFY 434 (434)
Q Consensus 421 ~~~GV~v~pG~~F~ 434 (434)
+++||.+.||+.|.
T Consensus 349 ~~~gi~v~~g~~f~ 362 (393)
T PRK05764 349 EEAGVAVVPGIAFG 362 (393)
T ss_pred HhCCEEEccccccC
Confidence 88899999998873
No 50
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=5.6e-47 Score=375.22 Aligned_cols=310 Identities=23% Similarity=0.374 Sum_probs=265.3
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+.++++|+.|.|++++++.+.+++.+... ....|++..|.++||+++++++.+.+|.+++++ +|++|+|+++++..++
T Consensus 23 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~-~I~it~G~~~al~~~~ 100 (374)
T PRK05839 23 EYKGLDLTIGEPQFETPKFIQDALKNNAH-LLNKYPKSAGEESLREAQRGFFKRRFKIELKEN-ELIPTFGTREVLFNFP 100 (374)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc-eEEEecCcHHHHHHHH
Confidence 34899999999999988888888877654 357899999999999999999999999989998 8999999999999988
Q ss_pred HHcc--CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHH
Q 013883 188 LGLI--NPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 188 ~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
..++ .+||.|++++|+|+.|...+...|++++.+++++ .++.+|++..+ + +++++|++++||||||.+++.+++
T Consensus 101 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~s~~~l 177 (374)
T PRK05839 101 QFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTLSLEEL 177 (374)
T ss_pred HHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCcccCHHHH
Confidence 8775 4789999999999999999999999999999975 35777765443 2 468999999999999999999999
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCCCccccCC-----CCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHH
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMDHISIASL-----PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA 339 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~-----~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~ 339 (434)
++|+++|++||++||+||+|.++.+++...++... ....+++++++||||.|+++|+|+||+++++++++++...
T Consensus 178 ~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~ 257 (374)
T PRK05839 178 IEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKYKAY 257 (374)
T ss_pred HHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHHHHHHHHH
Confidence 99999999999999999999998654433333221 1234799999999999999999999999999999998887
Q ss_pred hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHH
Q 013883 340 HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYL 419 (434)
Q Consensus 340 ~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 419 (434)
+.....+.+.+.|.++..+|.+ ++++++++++++++++.+.+.| ++. .+++++|+|+++. ++.+++++|
T Consensus 258 ~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l---~~~--~p~gg~fi~~~~~-----~~~~~~~~l 326 (374)
T PRK05839 258 RTYLGCASPLPLQKAAAVAWLD-DEHAEFFRNIYAKNLKLAREIL---GIT--IPPATFYVWLPVD-----NDEEFTKKL 326 (374)
T ss_pred HhhcCCCCChHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHhc---CCC--CCCeeEEEEEeCC-----ChHHHHHHH
Confidence 7666678899999999888875 6688899999999999988876 343 6789999999874 367899999
Q ss_pred HHhcCeEEECCCCC
Q 013883 420 IKEVGVVAIPTSVF 433 (434)
Q Consensus 420 l~~~GV~v~pG~~F 433 (434)
++++||.+.||+.|
T Consensus 327 ~~~~gi~v~pg~~f 340 (374)
T PRK05839 327 YQNEGIKVLPGSFL 340 (374)
T ss_pred HHHCCEEEeCchhh
Confidence 88789999999876
No 51
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=1.3e-47 Score=382.99 Aligned_cols=315 Identities=20% Similarity=0.260 Sum_probs=259.4
Q ss_pred CCeeEeCCCCC---CCCCc--HHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcE--EEcCChH
Q 013883 109 HGAINLGQGFP---NFDGP--DFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEV--TVTSGCT 180 (434)
Q Consensus 109 ~~~i~l~~g~p---~~~~~--~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i--~~t~G~~ 180 (434)
+++|||+.|.| +...| +.+.+++.++++++ ...|.+..|.++||+++++++.+..+..++++ +| ++|+|++
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~-~i~v~iT~Ga~ 104 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAG-RVATVQTPGGT 104 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccC-eEEEEecCCcc
Confidence 47899999963 33334 67888887776543 45799999999999999999987766666787 67 9999999
Q ss_pred HHHHHHHHHc--cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC-CCCCCCCHHHHHhhccc---CCcEEEecCCCCC
Q 013883 181 EAIAATILGL--INPGDEVILFAPFYDSYEATLSMAGAKIKCITLR-PPDFAIPIEELKSTISK---NTRAILMNTPHNP 254 (434)
Q Consensus 181 ~ai~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~---~~~~i~~~~p~NP 254 (434)
+++.++++.+ ++|||+|++++|+|+.|..+++..|++++.+|+. ++++++|++.++++++. +++++++++||||
T Consensus 105 ~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NP 184 (396)
T PRK09257 105 GALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNP 184 (396)
T ss_pred HHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 9999998766 5899999999999999999999999999999983 44689999999998763 3566677999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC-C-CccccCCCCCCCceEEEccCChhhccccceeeeEEe---C
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-D-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA---P 329 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~-~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~---~ 329 (434)
||.+++.+++++|+++|++||++||+||+|.+|.++. . ..++..+....+++++++||||.|+++|+|+||+++ +
T Consensus 185 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~ 264 (396)
T PRK09257 185 TGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAED 264 (396)
T ss_pred CCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCC
Confidence 9999999999999999999999999999999998752 2 334444444457899999999999989999999983 3
Q ss_pred hh----hHHHHHHHhhccccCCchHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHhhhCC----CEeecCC
Q 013883 330 PH----LTWGVRQAHSFLTFATSTPMQWAATAALRAP------ETYYEELKRDYSAKKAILVEGLNAVG----FKVFPSS 395 (434)
Q Consensus 330 ~~----~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~------~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~ 395 (434)
++ ++.+++...+....+++.+.|.++..+|.+. ++++++++++|+++++.+.+.|++.+ +.+..++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~ 344 (396)
T PRK09257 265 AEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQ 344 (396)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccc
Confidence 33 3444444444445667888999999999874 35677899999999999999999874 6778899
Q ss_pred eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 396 GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
||||+|+++ +.+++.+|++++||.+.|..
T Consensus 345 gg~~~w~~l-------~~~~~~~l~~~~~V~~~p~~ 373 (396)
T PRK09257 345 RGMFSYSGL-------TPEQVDRLREEFGVYAVGSG 373 (396)
T ss_pred ceEEEecCC-------CHHHHHHHHHcCCEEEcCCC
Confidence 999999987 23677888899999998853
No 52
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.2e-47 Score=388.99 Aligned_cols=321 Identities=24% Similarity=0.408 Sum_probs=267.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHH------------cCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCCCCcEEE
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIR------------DGKNQYARGHGVPEFNSAIASRFKKDSGL--EVDPEKEVTV 175 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~--~~~~~~~i~~ 175 (434)
+.|+|+.+++.++. +.+.+.+.+... .....|++..|.++||+++++++.+.+|. .++++ +|++
T Consensus 39 g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~-~Iii 116 (468)
T PLN02450 39 GIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN-KLVL 116 (468)
T ss_pred eeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH-HeEE
Confidence 68999999887766 666666554321 12345999999999999999999987774 47888 8999
Q ss_pred cCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH-HcCCEEEEEEcCC-CCCCCCHHHHHhhccc------CCcEEE
Q 013883 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS-MAGAKIKCITLRP-PDFAIPIEELKSTISK------NTRAIL 247 (434)
Q Consensus 176 t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~i~ 247 (434)
|+|+++++..++.++++|||.|++++|+|+.|...+. ..|++++.|++++ +++.+|++.+++++.+ ++++|+
T Consensus 117 t~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~ 196 (468)
T PLN02450 117 TAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVL 196 (468)
T ss_pred ccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEE
Confidence 9999999999999999999999999999999988888 5899999999874 5788999999988754 789999
Q ss_pred ecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCC--------CCCCceEEEccCChhhcc
Q 013883 248 MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLP--------GMYERTVTMNSLGKTFSL 318 (434)
Q Consensus 248 ~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~--------~~~~~~i~i~S~SK~~g~ 318 (434)
+++||||||.+++.+++++|+++|++||++||+||+|.++.|++. ..++..+. ...+++++++||||.||+
T Consensus 197 l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l 276 (468)
T PLN02450 197 ITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGL 276 (468)
T ss_pred EecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCC
Confidence 999999999999999999999999999999999999999888753 33322221 135789999999999999
Q ss_pred ccceeeeEEeChh-hHHHHHHHhhccccCCchHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHhhhCCCEeecC
Q 013883 319 TGWKIGWAIAPPH-LTWGVRQAHSFLTFATSTPMQWAATAALRAPE---TYYEELKRDYSAKKAILVEGLNAVGFKVFPS 394 (434)
Q Consensus 319 ~G~R~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 394 (434)
+|+|+||++++++ +++.+.+... ..+.+.+.|.++..+|++.. +++++++.+++++++.+.+.|++.|+.+.++
T Consensus 277 ~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~ 354 (468)
T PLN02450 277 PGFRVGAIYSNDEMVVSAATKMSS--FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKS 354 (468)
T ss_pred CCccEEEEEECCHHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC
Confidence 9999999999855 5565555432 23578899999999999853 4788899999999999999999999999999
Q ss_pred CeeEEEeeecCCCC----CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 395 SGTYFVVVDHTPFG----HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 395 ~~~~~~~~~~~~~~----~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++|+|+|+++.+.- .....+++++|++++||.+.||+.|+
T Consensus 355 ~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~ 398 (468)
T PLN02450 355 NAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCH 398 (468)
T ss_pred CceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccC
Confidence 99999999985321 11235688888888899999999874
No 53
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=8.4e-47 Score=381.02 Aligned_cols=309 Identities=19% Similarity=0.230 Sum_probs=267.8
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
..++|+.|.|+.+++|.+.+++.++... ...|++..|.++||+++++++++..+ .++ +|++|+|+++++..++.+
T Consensus 86 ~~i~L~~g~p~~~~~p~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~-~Iiit~G~~~al~~~~~~ 160 (431)
T PRK15481 86 PLHDLAGGNPDPQRLPDLSRYFARLSRT-PRLYGDAPVSPELHAWAARWLRDDCP---VAF-EIDLTSGAIDAIERLLCA 160 (431)
T ss_pred hhhhhhcCCCChhHhHHHHHHHHHhhhh-hhhcCCcCCCHHHHHHHHHHHhhccC---CcC-eEEEecCcHHHHHHHHHH
Confidence 5689999999888777777777765543 45799999999999999999875432 244 899999999999999999
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEec-CCCCCcccCCCHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMN-TPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~-~p~NPTG~~~~~e~l~~i~ 268 (434)
+++|||+|++++|+|+.|...++.+|++++.+|+++ .++|++.+++++++++++++++ +||||||.+++.+++++|+
T Consensus 161 l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~--~g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~ 238 (431)
T PRK15481 161 HLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDA--EGMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALR 238 (431)
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCC--CCCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHH
Confidence 999999999999999999999999999999999974 3589999999998889998887 9999999999999999999
Q ss_pred HHHHHc-CcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC
Q 013883 269 SLCIEN-DVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 269 ~la~~~-~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~ 347 (434)
++|++| +++||+||+|.+|.+++. .+. +....+++++++||||.|| +|+|+||+++++++++.+........++.
T Consensus 239 ~la~~~~~~~ii~De~Y~~~~~~~~-~~~--~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~~~~ 314 (431)
T PRK15481 239 NLLARYPQVLVIIDDHFALLSSSPY-HSV--IPQTTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGTQWV 314 (431)
T ss_pred HHHHhcCCceEEecCchhhhccCCC-CCC--CcCCCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhccccCC
Confidence 999999 999999999999976532 222 2223468999999999999 99999999999999999887666556778
Q ss_pred chHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCe
Q 013883 348 STPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGV 425 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV 425 (434)
+.+.|.++..+|++. +++++++++.++++++.+.+.|++.|+.+..+++|+|+|++++. ++.+++++|++ +||
T Consensus 315 s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~----~~~~~~~~l~~-~gV 389 (431)
T PRK15481 315 SHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDT----DSQATALTLAK-SGW 389 (431)
T ss_pred CHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCC----CHHHHHHHHHH-CCc
Confidence 999999999999985 46788999999999999999999999988789999999999853 46788888864 699
Q ss_pred EEECCCCCC
Q 013883 426 VAIPTSVFY 434 (434)
Q Consensus 426 ~v~pG~~F~ 434 (434)
.+.||+.|+
T Consensus 390 ~v~pg~~f~ 398 (431)
T PRK15481 390 LVREGEAFG 398 (431)
T ss_pred EEecCCccc
Confidence 999999884
No 54
>PLN02397 aspartate transaminase
Probab=100.00 E-value=4.1e-47 Score=381.26 Aligned_cols=314 Identities=18% Similarity=0.234 Sum_probs=248.8
Q ss_pred CCeeEeCCC-CCCCCCcHHHHHHHHHH----HHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcE-----EEcC
Q 013883 109 HGAINLGQG-FPNFDGPDFVKDAAIQA----IRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEV-----TVTS 177 (434)
Q Consensus 109 ~~~i~l~~g-~p~~~~~~~v~~~~~~~----~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i-----~~t~ 177 (434)
+.+|+|+.| .|+...++.+.+.+.++ +..+ ..+|++..|.++||+++++++.+..+...+++ +| +.++
T Consensus 48 ~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~-~i~~~~i~~g~ 126 (423)
T PLN02397 48 PVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKEN-RVATVQCLSGT 126 (423)
T ss_pred cceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcC-eeEeeecccch
Confidence 478999999 57876666555555444 3333 34799999999999999999976655444333 33 3344
Q ss_pred ChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC-CCCCCCCHHHHHhhcc---cCCcEEEecCCCC
Q 013883 178 GCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR-PPDFAIPIEELKSTIS---KNTRAILMNTPHN 253 (434)
Q Consensus 178 G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~---~~~~~i~~~~p~N 253 (434)
|+.+ +...+..++.|||+|++++|+|+.|...++..|++++.+|+. ++++++|++.+++.+. ++++++++++|||
T Consensus 127 Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~N 205 (423)
T PLN02397 127 GSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHN 205 (423)
T ss_pred HHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 4433 444444556799999999999999999999999999999984 3468999998888775 4678888999999
Q ss_pred CcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC---CCccccCCCCCCCceEEEccCChhhccccceeeeEE--e
Q 013883 254 PTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM---DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAI--A 328 (434)
Q Consensus 254 PTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~---~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~--~ 328 (434)
|||.+++.+++++|+++|++||++||+||+|.+|.+++ ...++..+....+++|+++||||.|+++|||+||++ +
T Consensus 206 PTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~ 285 (423)
T PLN02397 206 PTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVC 285 (423)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEe
Confidence 99999999999999999999999999999999999865 223333443334679999999999999999999985 4
Q ss_pred -ChhhHH----HHHHHhhccccCCchHHHHHHHHHHhCCh---HH---HHHHHHHHHHHHHHHHHHhhhCC----CEeec
Q 013883 329 -PPHLTW----GVRQAHSFLTFATSTPMQWAATAALRAPE---TY---YEELKRDYSAKKAILVEGLNAVG----FKVFP 393 (434)
Q Consensus 329 -~~~~~~----~l~~~~~~~~~~~~~~~q~a~~~~L~~~~---~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~ 393 (434)
+++++. .+....+...++++.+.|.++..+|++++ +| +++++++++++|+.+.+.|+++| |++..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~ 365 (423)
T PLN02397 286 KSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHIT 365 (423)
T ss_pred CCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccc
Confidence 555443 44455555566788889999999998742 34 67889999999999999999987 88889
Q ss_pred CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 394 SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
++|+||+|+++. .+|+++|++++||++.++.
T Consensus 366 p~gg~fl~~~l~-------~~~~~~Ll~~~~V~v~~~~ 396 (423)
T PLN02397 366 KQIGMFSFTGLN-------KEQVDRMTKEYHIYMTRDG 396 (423)
T ss_pred CCceEEEecCCC-------HHHHHHHHHhCCEEECCCC
Confidence 999999999872 4699999999999998765
No 55
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.5e-46 Score=369.92 Aligned_cols=319 Identities=30% Similarity=0.551 Sum_probs=277.8
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
.++++|+.|.|++++++.+.+++.+... ....|.+..|.++||+++++++. .+|..++++ +|++|+|+++++..++.
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~-~i~~t~G~~~al~~~~~ 106 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYK-KWGIDVEPD-EILITNGGSEAILFAMM 106 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHH-HhCCCCCcc-eEEEcCChHHHHHHHHH
Confidence 4689999999998888888888876643 45679999999999999999998 578888888 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCC-CCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFA-IPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~-~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
.++++||+|++++|+|..+...++..|++++.++++. .++. .+++.+++++++++++|++++||||||.+++.+++++
T Consensus 107 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~ 186 (397)
T PRK07568 107 AICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEM 186 (397)
T ss_pred HhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHH
Confidence 9999999999999999999999999999999999874 3344 3689999999889999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhhccc
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLT 344 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~ 344 (434)
|+++|+++|++||+||+|.+|.+++. ..++..+.+..+++++++||||.+|++|+|+||++++ +++++.+..... ..
T Consensus 187 i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~-~~ 265 (397)
T PRK07568 187 LAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQ-AR 265 (397)
T ss_pred HHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhh-cc
Confidence 99999999999999999999988763 3455555544689999999999999999999999985 678877765543 24
Q ss_pred cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHh-
Q 013883 345 FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKE- 422 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~- 422 (434)
++.+.+.|.++..+|++.++++++++..++++++.+.+.|++. |+.+..++|++|+|++++. .++.+++++|+++
T Consensus 266 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~---~~~~~~~~~l~~~~ 342 (397)
T PRK07568 266 LSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPV---DDAEDFAKWLLTDF 342 (397)
T ss_pred CCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCC---CCHHHHHHHHHhhc
Confidence 6889999999999998777899999999999999999999887 7888889999999998753 2577899988864
Q ss_pred ----cCeEEECCCCCC
Q 013883 423 ----VGVVAIPTSVFY 434 (434)
Q Consensus 423 ----~GV~v~pG~~F~ 434 (434)
+||.+.||+.||
T Consensus 343 ~~~~~gv~v~pg~~f~ 358 (397)
T PRK07568 343 NYNGETVMVAPASGFY 358 (397)
T ss_pred ccccceEEEeCchHhc
Confidence 699999998884
No 56
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=2.2e-46 Score=377.68 Aligned_cols=317 Identities=21% Similarity=0.328 Sum_probs=253.1
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHH-HHHHhhcCCCCCCCC--cEEEcCChHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIA-SRFKKDSGLEVDPEK--EVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia-~~l~~~~g~~~~~~~--~i~~t~G~~~ai~~~ 186 (434)
+.|+|++|.|++++++.+.+.+ +++.. ..|+++.|..+++++++ +++.+.++....+.+ +|++|+|+++++..+
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~-~~~~~--~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~ 171 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMC-DGIIG--DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYI 171 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHH-HHhhc--CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 5699999999999877765544 44332 25877777788887777 566665544333433 799999999999998
Q ss_pred HHH-----ccCCCCeEEEcCCCchhHHHHHHHc--CCEEEEEEcCCC-C-----CCCCHHHHHhhcccCCcEEEecCCCC
Q 013883 187 ILG-----LINPGDEVILFAPFYDSYEATLSMA--GAKIKCITLRPP-D-----FAIPIEELKSTISKNTRAILMNTPHN 253 (434)
Q Consensus 187 ~~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~--G~~~~~v~~~~~-~-----~~~d~~~l~~~i~~~~~~i~~~~p~N 253 (434)
+.+ +++|||+|++++|+|+.|..++... |++++.++.+++ + |.+|++.+++++++++|+|++++|||
T Consensus 172 ~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~N 251 (521)
T TIGR03801 172 FDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSN 251 (521)
T ss_pred HHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCC
Confidence 887 7899999999999999999998776 678888887642 2 88999999999888999999999999
Q ss_pred CcccCCCHHHHHHHHHHHHHc--CcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh
Q 013883 254 PTGKMFTREELNVIASLCIEN--DVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH 331 (434)
Q Consensus 254 PTG~~~~~e~l~~i~~la~~~--~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~ 331 (434)
|||.+++.+++++|+++|++| |++||+||+|..|.+ ++.++... .++++++++||||.||++|||+||++++++
T Consensus 252 PTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~sl~~~--~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 252 PPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--DFRSLFAE--LPYNTIGVYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--cccchhhh--CCCCEEEEEcchhhccCchhhhhhhhcCch
Confidence 999999999999999999987 999999999999875 33444333 357999999999999999999999999865
Q ss_pred -----hHH--------HH------------------------HHHhhccccCCchHHHH-----HHHHHHhCChHHHHHH
Q 013883 332 -----LTW--------GV------------------------RQAHSFLTFATSTPMQW-----AATAALRAPETYYEEL 369 (434)
Q Consensus 332 -----~~~--------~l------------------------~~~~~~~~~~~~~~~q~-----a~~~~L~~~~~~~~~~ 369 (434)
++. .+ +++....+.+.+.+.|. ++.++|+..++|.+++
T Consensus 328 ~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~~~ 407 (521)
T TIGR03801 328 NIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKAET 407 (521)
T ss_pred HHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHHHH
Confidence 221 11 44555566778888876 3445566667899999
Q ss_pred HHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCC--------------CCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 370 KRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGH--------------ETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++.+++|++.+.+.| ...+...+++|+||+|+++...+. .++.+++.+|++++||.+.||..|+
T Consensus 408 ~~~~~~R~~~l~~~L-g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg 485 (521)
T TIGR03801 408 KDICRRREKLLFRGL-GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFG 485 (521)
T ss_pred HHHHHHHHHHHHHhc-CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcC
Confidence 999999999999998 223334678999999999864321 1478999999999999999999985
No 57
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.6e-46 Score=380.46 Aligned_cols=322 Identities=22% Similarity=0.404 Sum_probs=263.4
Q ss_pred CeeEeCCCCCCC--CC-cHHHHHHHHHHHHc--------CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCCCCcEEEc
Q 013883 110 GAINLGQGFPNF--DG-PDFVKDAAIQAIRD--------GKNQYARGHGVPEFNSAIASRFKKDSG--LEVDPEKEVTVT 176 (434)
Q Consensus 110 ~~i~l~~g~p~~--~~-~~~v~~~~~~~~~~--------~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~~i~~t 176 (434)
+.|+|+..++.+ +. ++++++.....+.. ....|.+..|.++||+++++++++.+| +.++++ +|++|
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-~Ivit 125 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-RVVMS 125 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-hEEEc
Confidence 689999987655 33 45555443321111 124688899999999999999998888 668898 89999
Q ss_pred CChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH-HcCCEEEEEEcCC-CCCCCCHHHHHhhcc------cCCcEEEe
Q 013883 177 SGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS-MAGAKIKCITLRP-PDFAIPIEELKSTIS------KNTRAILM 248 (434)
Q Consensus 177 ~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~G~~~~~v~~~~-~~~~~d~~~l~~~i~------~~~~~i~~ 248 (434)
+|+++++..++.++++|||.|++++|+|+.+...+. ..|++++.|+++. +++++|++.+++++. .++|+|++
T Consensus 126 ~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l 205 (496)
T PLN02376 126 GGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLIL 205 (496)
T ss_pred cchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEE
Confidence 999999999999999999999999999999998887 5899999999975 468999999986542 36899999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC-CCccccCCCC-------CCCceEEEccCChhhcccc
Q 013883 249 NTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASLPG-------MYERTVTMNSLGKTFSLTG 320 (434)
Q Consensus 249 ~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~-~~~~~~~~~~-------~~~~~i~i~S~SK~~g~~G 320 (434)
++||||||.+++.+++++|+++|++||++||+||+|.++.|++ .+.++..+.. ..+++++++||||.||++|
T Consensus 206 ~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpG 285 (496)
T PLN02376 206 TNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPG 285 (496)
T ss_pred cCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCc
Confidence 9999999999999999999999999999999999999998876 3445444421 1245778999999999999
Q ss_pred ceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCe
Q 013883 321 WKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAP---ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSG 396 (434)
Q Consensus 321 ~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 396 (434)
+|+||++++ +.+.+.++.... ....+.+.|.++..+|++. ++++++++++++++++.+.+.|++.|+.+.++++
T Consensus 286 lRvG~li~~~~~l~~~~~~~~~--~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~a 363 (496)
T PLN02376 286 FRVGIVYSFNDSVVSCARKMSS--FGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNA 363 (496)
T ss_pred ceEEEEEECCHHHHHHHHHHhh--cCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCc
Confidence 999999995 555555554442 2357889999999999874 3566778899999999999999999999999999
Q ss_pred eEEEeeecCCCC-----CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 397 TYFVVVDHTPFG-----HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 397 ~~~~~~~~~~~~-----~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
|+|+|+++.+.. .++..+++++|+++.||.+.||+.|+
T Consensus 364 G~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~ 406 (496)
T PLN02376 364 GLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFR 406 (496)
T ss_pred eEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccC
Confidence 999999985421 11236788899888899999999884
No 58
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=2.6e-45 Score=367.29 Aligned_cols=323 Identities=26% Similarity=0.446 Sum_probs=264.4
Q ss_pred cCCeeEeCCCCC---CCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFP---NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p---~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+++.|+|+.|.| ++++++.+.+++.+.+.. ...|++..|.++||+++++++.+.....++++ +|++|+|+++++.
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-~i~~t~G~~~~l~ 109 (404)
T PRK09265 32 GHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT-AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVD-DIYIGNGVSELIV 109 (404)
T ss_pred CCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcc-cEEEeCChHHHHH
Confidence 457899999988 456778888887776653 46799999999999999999986555468888 8999999999999
Q ss_pred HHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHH
Q 013883 185 ATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREE 263 (434)
Q Consensus 185 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~ 263 (434)
.++.+++++||+|++++|+|..+...+...|++++.++.+. .++.+|++.+++++++++++|++++||||||.+++.++
T Consensus 110 ~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~ 189 (404)
T PRK09265 110 MAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKEL 189 (404)
T ss_pred HHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHH
Confidence 99999999999999999999999999999999999998864 35789999999999889999999999999999999999
Q ss_pred HHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEe--Chh----hHHHH
Q 013883 264 LNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA--PPH----LTWGV 336 (434)
Q Consensus 264 l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~--~~~----~~~~l 336 (434)
+++|+++|++||++||+||+|.++.|++. ..++..+.. ..++++++||||.+|++|+|+||+++ +++ +++.+
T Consensus 190 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~ 268 (404)
T PRK09265 190 LEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAP-DLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGL 268 (404)
T ss_pred HHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCC-CceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHH
Confidence 99999999999999999999999988753 334444432 24689999999999999999999996 343 33333
Q ss_pred HHHhhccccCCchHHHHHHHHHHhCChHH--HHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCC--CCCC
Q 013883 337 RQAHSFLTFATSTPMQWAATAALRAPETY--YEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPF--GHET 411 (434)
Q Consensus 337 ~~~~~~~~~~~~~~~q~a~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~--~~~~ 411 (434)
... ....++++.+.|.++..+|.+.+.+ +...+++++++++.+.+.|+++ |+.+.++++|+|+|++++.. +..+
T Consensus 269 ~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~ 347 (404)
T PRK09265 269 DML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYPIHD 347 (404)
T ss_pred HHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccCCCC
Confidence 322 2345788899999999999764321 1122356778899999999887 88888999999999987542 1223
Q ss_pred HHHHHHHHHHhcCeEEECCCCCC
Q 013883 412 DIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+.+++.++++++||.+.||+.|+
T Consensus 348 ~~~~~~~~l~~~gv~v~pg~~F~ 370 (404)
T PRK09265 348 DEQFVLDLLLQEKVLLVQGTGFN 370 (404)
T ss_pred HHHHHHHHHHhCCEEEECchhhC
Confidence 55666667778899999999883
No 59
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=3.9e-45 Score=365.74 Aligned_cols=324 Identities=25% Similarity=0.477 Sum_probs=277.2
Q ss_pred cCCeeEeCCCCCC----CCCcHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 108 KHGAINLGQGFPN----FDGPDFVKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 108 ~~~~i~l~~g~p~----~~~~~~v~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.+.++|+.|.|+ +++++.+.+++.+.+.... ..|.+..|..+||++++++++..++..++++ +|++|+|++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~ii~t~G~t~a 108 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTAD-DVVLTSGCSQA 108 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHH-HEEEecChHHH
Confidence 4589999999874 6788899999988876543 5798899999999999999998788888888 89999999999
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCH
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTR 261 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~ 261 (434)
+.+++.+++++||+|++++|+|..+...+...|++++.+++++ +++++|++.++++++++++++++++||||||.+++.
T Consensus 109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~ 188 (403)
T TIGR01265 109 IEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSR 188 (403)
T ss_pred HHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999998864 357899999999998899999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeCh--h-----hH
Q 013883 262 EELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP--H-----LT 333 (434)
Q Consensus 262 e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~--~-----~~ 333 (434)
+++++|+++|+++|++||+||+|.+|.+++. ..++..+.. ..++++++||||.|+++|+|+||++++. + ++
T Consensus 189 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~ 267 (403)
T TIGR01265 189 DHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFAS-IVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVL 267 (403)
T ss_pred HHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhcc-CCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHH
Confidence 9999999999999999999999999988763 234455533 3479999999999999999999999842 2 33
Q ss_pred HHHHHHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCC---
Q 013883 334 WGVRQAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFG--- 408 (434)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--- 408 (434)
+.+..... ...+++.+.|.++..+|.+ .+.++++.+++++++++.+.+.|+.. |+.+..+++++|+|++++...
T Consensus 268 ~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~ 346 (403)
T TIGR01265 268 QGLKNLLQ-RILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFPE 346 (403)
T ss_pred HHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccccCC
Confidence 33444332 2467889999999999975 46789999999999999999999987 788778899999999985421
Q ss_pred CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 409 HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 409 ~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
..++.+++++|++++||.+.||+.|+
T Consensus 347 ~~~~~~~~~~l~~~~gv~v~pg~~f~ 372 (403)
T TIGR01265 347 IKDDVDFCEKLVREESVICLPGSAFG 372 (403)
T ss_pred CCCHHHHHHHHHHhCCEEEeCccccC
Confidence 12577899998888899999999874
No 60
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.3e-45 Score=364.57 Aligned_cols=305 Identities=26% Similarity=0.420 Sum_probs=261.1
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCCCCcEEEcCChHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLE-VDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~-~~~~~~i~~t~G~~~ai~~~~ 187 (434)
.+.++|+.|.|..+.++.+.+++.+... ...|++..|.++||+++++++.+.+|++ ++++ +|++|+|+++++..++
T Consensus 27 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~-~I~it~G~~~~i~~~~ 103 (364)
T PRK07865 27 DGIVDLSVGTPVDPVPPVIQEALAAAAD--APGYPTTAGTPELREAIVGWLARRRGVTGLDPA-AVLPVIGSKELVAWLP 103 (364)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHh--hCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcc-cEEEccChHHHHHHHH
Confidence 4689999999987778888888876543 3579999999999999999999999987 8888 8999999999999988
Q ss_pred HHc-cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 188 LGL-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 188 ~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
..+ +++||+|++++|+|+.|...++..|++++.++ +++.++ ..++++|++++||||||.+++.+++++
T Consensus 104 ~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~--------~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~ 172 (364)
T PRK07865 104 TLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD--------SLTELG---PQRPALIWLNSPSNPTGRVLGVDHLRK 172 (364)
T ss_pred HHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC--------ChhhCC---cccceEEEEcCCCCCCCccCCHHHHHH
Confidence 888 79999999999999999999999999988774 223332 257899999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCC---CCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASL---PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 343 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~---~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~ 343 (434)
|+++|++||++||+||+|.++.+++........ ....+++++++||||.+|++|+|+||++++++++++++..+...
T Consensus 173 i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~~~~~ 252 (364)
T PRK07865 173 VVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEVRKHA 252 (364)
T ss_pred HHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHHHHHHHhc
Confidence 999999999999999999998886533222111 11347899999999999999999999999999999998877767
Q ss_pred ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhc
Q 013883 344 TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEV 423 (434)
Q Consensus 344 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~ 423 (434)
.++.+.+.|.++..+|.+ .+++++.+..++++++.+.+.|++.|+.+..+++++|+|+++.. +..+++++| +++
T Consensus 253 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~ 326 (364)
T PRK07865 253 GMMVPAPVQAAMVAALGD-DAHVREQRERYARRRAVLRPALEAAGFRVDHSEAGLYLWATRGE----DCWDTVAWL-AER 326 (364)
T ss_pred CCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCccEEEEEeCCC----CHHHHHHHH-HHC
Confidence 788899999999999986 66788899999999999999999999988889999999998632 456777766 456
Q ss_pred CeEEECCCCC
Q 013883 424 GVVAIPTSVF 433 (434)
Q Consensus 424 GV~v~pG~~F 433 (434)
||.+.||..|
T Consensus 327 gv~v~pg~~f 336 (364)
T PRK07865 327 GILVAPGDFY 336 (364)
T ss_pred CEEEeCcccc
Confidence 9999999876
No 61
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-45 Score=369.92 Aligned_cols=318 Identities=25% Similarity=0.419 Sum_probs=280.6
Q ss_pred CCeeEeCCCCCCCC--CcHHHHHHHHHHHHc---C-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 109 HGAINLGQGFPNFD--GPDFVKDAAIQAIRD---G-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 109 ~~~i~l~~g~p~~~--~~~~v~~~~~~~~~~---~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+..++|+.|.|+.. +.....+++.+.++. . ...|.+..|.++||+++++++....|+.++++ +|++|+|++++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~-~IiiT~G~q~a 167 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPE-QIVITSGAQQA 167 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcC-eEEEeCCHHHH
Confidence 67899999977653 344566666666543 2 46788889999999999999998999999999 99999999999
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEec-CCCCCcccCCC
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMN-TPHNPTGKMFT 260 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~-~p~NPTG~~~~ 260 (434)
+.++++.+++|||+|++++|+|.+...+++..|++++.||++ +.++|+|.+++.++. ++|+++++ +-|||||.++|
T Consensus 168 l~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms 245 (459)
T COG1167 168 LDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMS 245 (459)
T ss_pred HHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccC
Confidence 999999999999999999999999999999999999999998 678999999999977 67887664 56999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCc-cccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHH
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHI-SIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA 339 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~ 339 (434)
.+..++|+++|++||++||+||.|++|.|++... ++..+.. .++|++++||||.+. ||+|+||+++++++++++...
T Consensus 246 ~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~-~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~~ 323 (459)
T COG1167 246 LERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDA-PGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLRL 323 (459)
T ss_pred HHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCC-CCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHHH
Confidence 9999999999999999999999999999986543 4555543 689999999999998 999999999999999999999
Q ss_pred hhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhC---CCEeecCCeeEEEeeecCCCCCCCHHH
Q 013883 340 HSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAV---GFKVFPSSGTYFVVVDHTPFGHETDIA 414 (434)
Q Consensus 340 ~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (434)
+.....+++.+.|.+++..|.++ ++++++++..|+++++.+.+.|++. +..+..+.||||+|+++++ +. ++.+
T Consensus 324 k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~-~~-~~~~ 401 (459)
T COG1167 324 KQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPE-GI-DARE 401 (459)
T ss_pred HHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCC-CC-CHHH
Confidence 99999999999999999999964 7899999999999999999999986 3677899999999999854 33 5778
Q ss_pred HHHHHHHhcCeEEEC-CCCCC
Q 013883 415 FCEYLIKEVGVVAIP-TSVFY 434 (434)
Q Consensus 415 ~~~~Ll~~~GV~v~p-G~~F~ 434 (434)
+.++++++ ||.+.| |..|+
T Consensus 402 l~~~a~~~-gv~i~~~g~~f~ 421 (459)
T COG1167 402 LLAAALEK-GVVVTPLGSAFS 421 (459)
T ss_pred HHHHHHHC-CCEEEcCCcccc
Confidence 88888765 999999 88875
No 62
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-45 Score=341.74 Aligned_cols=323 Identities=28% Similarity=0.432 Sum_probs=293.4
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
.++++.|.+...|++.+|.+.+++++.++++.++|+ .+..++.+++++|..++++..++++ .|+++.|..-++..++
T Consensus 24 ~~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e-~i~~~p~VVpgi~~~I 100 (388)
T COG1168 24 NEDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPE-WIVFVPGVVPGISLAI 100 (388)
T ss_pred CCCcceeeeecccCCCCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcc-eEEEcCcchHhHHHHH
Confidence 358999999999999999999999999999989998 4667899999999999999999999 7999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC--CCCCCHHHHHhhcccC-CcEEEecCCCCCcccCCCHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP--DFAIPIEELKSTISKN-TRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~--~~~~d~~~l~~~i~~~-~~~i~~~~p~NPTG~~~~~e~l 264 (434)
+.+++|||.|++..|.|+++....+..|.+++..|+..+ .+.+|++.||+++.+. .++.++||||||||.+.+.|++
T Consensus 101 ~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL 180 (388)
T COG1168 101 RALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEEL 180 (388)
T ss_pred HHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHH
Confidence 999999999999999999999999999999999999753 4677999999999774 6999999999999999999999
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCC-CCccccCCCC-CCCceEEEccCChhhccccceeeeEEeChh-hHH-HHHHHh
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASLPG-MYERTVTMNSLGKTFSLTGWKIGWAIAPPH-LTW-GVRQAH 340 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~-~~~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~-~~~-~l~~~~ 340 (434)
.+|.++|++||+.||.||+|+++.+.| .+.++..+.. ..++.+.+.|.||+|+++|+.+++++.+.+ +.. .++.+.
T Consensus 181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~ 260 (388)
T COG1168 181 RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLK 260 (388)
T ss_pred HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHH
Confidence 999999999999999999999999998 6666666643 247899999999999999999999888644 323 345555
Q ss_pred hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--CCEeecCCeeEEEeeecCCCCCCCHHHHHHH
Q 013883 341 SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV--GFKVFPSSGTYFVVVDHTPFGHETDIAFCEY 418 (434)
Q Consensus 341 ~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (434)
.....+++.++..|..+++++++.|++++++-++.+++++.+.|++. ++++..|+|.|.+|+++.+++. ++.++.+.
T Consensus 261 ~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l-~d~~l~~~ 339 (388)
T COG1168 261 RNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGL-DDSELAEF 339 (388)
T ss_pred HhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCC-ChHHHHHH
Confidence 56678899999999999999999999999999999999999999986 8999999999999999999887 46799999
Q ss_pred HHHhcCeEEECCCCCC
Q 013883 419 LIKEVGVVAIPTSVFY 434 (434)
Q Consensus 419 Ll~~~GV~v~pG~~F~ 434 (434)
|+++.+|.+.+|..|.
T Consensus 340 ll~~akVal~~G~~FG 355 (388)
T COG1168 340 LLEEAKVALSPGSTFG 355 (388)
T ss_pred HHHhhcEeccCCCccC
Confidence 9999999999999985
No 63
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.4e-45 Score=371.23 Aligned_cols=321 Identities=23% Similarity=0.414 Sum_probs=265.3
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHH------------cCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCCCCcEEE
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIR------------DGKNQYARGHGVPEFNSAIASRFKKDSGL--EVDPEKEVTV 175 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~--~~~~~~~i~~ 175 (434)
+.|||+..++.+. .+++.+.+.+... .....|.+..|.++||+++|+++++.+|. .++++ +|++
T Consensus 48 g~i~l~~aeN~l~-~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~-~Ivi 125 (447)
T PLN02607 48 GVIQMGLAENQVS-FDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD-RIVL 125 (447)
T ss_pred ceEEEechhhhhh-HHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH-HeEE
Confidence 6899999876542 3334444444322 01245888899999999999999988773 58888 8999
Q ss_pred cCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH-HcCCEEEEEEcCC-CCCCCCHHHHHhhccc------CCcEEE
Q 013883 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS-MAGAKIKCITLRP-PDFAIPIEELKSTISK------NTRAIL 247 (434)
Q Consensus 176 t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~i~ 247 (434)
|+|+++++.+++.++++|||.|+++.|+|+++...+. ..|++++.|+++. +++.+|++.++++++. ++|+|+
T Consensus 126 t~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~ll 205 (447)
T PLN02607 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVL 205 (447)
T ss_pred cCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEE
Confidence 9999999999999999999999999999999988777 5899999999875 4578999999998864 789999
Q ss_pred ecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC-CCccccCCC------CCCCceEEEccCChhhcccc
Q 013883 248 MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASLP------GMYERTVTMNSLGKTFSLTG 320 (434)
Q Consensus 248 ~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~-~~~~~~~~~------~~~~~~i~i~S~SK~~g~~G 320 (434)
+++||||||.+++.+++++|+++|++||+++|+||+|.++.|++ .+.++..+. +..+++++++||||.||++|
T Consensus 206 l~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~G 285 (447)
T PLN02607 206 ITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPG 285 (447)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCc
Confidence 99999999999999999999999999999999999999988875 344444321 22578999999999999999
Q ss_pred ceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCe
Q 013883 321 WKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP---ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSG 396 (434)
Q Consensus 321 ~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 396 (434)
+|+||+++ +++++..++.... ...++.+.|.++..+|++. ++++++++++++++++.+.+.|++.|+.+.++++
T Consensus 286 lRvG~ivs~n~~l~~~~~~~~~--~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~a 363 (447)
T PLN02607 286 FRVGTIYSYNDKVVTTARRMSS--FTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNA 363 (447)
T ss_pred ceEEEEEEcCHHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCe
Confidence 99999998 5667666665542 2356888999999999985 3677888999999999999999999999999999
Q ss_pred eEEEeeecCCCC----CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 397 TYFVVVDHTPFG----HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 397 ~~~~~~~~~~~~----~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
|+|+|+++++.- .+...+++++|++++||.|.||+.|.
T Consensus 364 g~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~ 405 (447)
T PLN02607 364 GLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCH 405 (447)
T ss_pred eEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccC
Confidence 999999986431 12234788889888899999999873
No 64
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2e-44 Score=355.00 Aligned_cols=306 Identities=27% Similarity=0.407 Sum_probs=261.8
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLE-VDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~-~~~~~~i~~t~G~~~ai~~~ 186 (434)
.++.+||+.|+|+.+.++.+.+++.++.. ...|++..|.++||+++++++.+.+|++ ++++ +|++|+|+++++..+
T Consensus 20 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~-~I~it~G~~~~i~~~ 96 (357)
T TIGR03539 20 PDGIVDLSVGTPVDPVPPLIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLDPT-AVLPVIGTKELVAWL 96 (357)
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHh--hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcC-eEEEccChHHHHHHH
Confidence 34689999999988888888888876653 4679999999999999999999988987 9998 899999999999999
Q ss_pred HHHc-cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 187 ILGL-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 187 ~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+..+ +++||.|++++|+|+.+...++..|++++.++ |++.+. ..++++|++++||||||.+++.++++
T Consensus 97 ~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--------~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~ 165 (357)
T TIGR03539 97 PTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD--------DPTELD---PVGPDLIWLNSPGNPTGRVLSVDELR 165 (357)
T ss_pred HHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC--------ChhhcC---ccCccEEEEeCCCCCcCccCCHHHHH
Confidence 8888 79999999999999999999999999988763 233332 24789999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCCccccC---CCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDHISIAS---LPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSF 342 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~---~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~ 342 (434)
+|+++|++||++||+||+|.++.+++....... .....+++++++||||.||++|+|+||+++++++++.++..+..
T Consensus 166 ~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~~~~~ 245 (357)
T TIGR03539 166 AIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTVRKH 245 (357)
T ss_pred HHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHHHHHHHHhh
Confidence 999999999999999999999887654322211 11235689999999999999999999999999999999888776
Q ss_pred cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHh
Q 013883 343 LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKE 422 (434)
Q Consensus 343 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 422 (434)
..++++.+.|.++..+|++ .++++..+..++++++.+.+.|++.|+.+.++++++|+|+++.. +..++.++| ++
T Consensus 246 ~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~~~~~~~~~~~----~~~~~~~~l-~~ 319 (357)
T TIGR03539 246 AGLMVPAPVQAAMVAALGD-DGHVAEQKARYAARRAQLKPALEKAGFRIDHSEAGLYLWATRGE----DAWDTVDRL-AE 319 (357)
T ss_pred cccCCCHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCccEEEEEECCC----CHHHHHHHH-Hh
Confidence 6788999999999999976 56788889999999999999999999888899999999998632 456777776 56
Q ss_pred cCeEEECCCCC
Q 013883 423 VGVVAIPTSVF 433 (434)
Q Consensus 423 ~GV~v~pG~~F 433 (434)
+||.|.||..|
T Consensus 320 ~gV~v~pg~~f 330 (357)
T TIGR03539 320 LGILVAPGDFY 330 (357)
T ss_pred CCEEECCcccc
Confidence 69999999866
No 65
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=2.7e-44 Score=359.60 Aligned_cols=314 Identities=27% Similarity=0.396 Sum_probs=259.2
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-----CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDG-----KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.++++|+.|.|++++++.+.+++.+.+.+. ...|.|..|.++||+++++++.+. .++++ +|++|+|++++
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d-~I~it~Ga~~a 107 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPE-EIFISDGAKCD 107 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHH-HEEECCCcHHH
Confidence 3578999999999999999999998887652 256988899999999999986432 27787 89999999999
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCC-----------EEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecC
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEATLSMAGA-----------KIKCITLRP-PDFAIPIEELKSTISKNTRAILMNT 250 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~-----------~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~ 250 (434)
+..+ ..++.+||+|++++|+|..|..+++..|+ +++.++.++ +++.+|++. .+++++|++++
T Consensus 108 l~~l-~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i~l~n 181 (402)
T TIGR03542 108 VFRL-QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDIIYLCS 181 (402)
T ss_pred HHHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceEEEEeC
Confidence 9986 45668999999999999999999999999 999999864 345555422 14789999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeC
Q 013883 251 PHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 251 p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
||||||.+++.+++++|+++|++||++||+||+|.+|.+++. ..++..++...+++++++||||.||++|+|+||++++
T Consensus 182 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~ 261 (402)
T TIGR03542 182 PNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVP 261 (402)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEec
Confidence 999999999999999999999999999999999999987653 2344455444568999999999999999999999999
Q ss_pred hhhH--------HHHHHHhhccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEE
Q 013883 330 PHLT--------WGVRQAHSFLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFV 400 (434)
Q Consensus 330 ~~~~--------~~l~~~~~~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 400 (434)
++++ ..+.........+.+.+.|.++..+|.+. .+++++.+..++++++.+.+.|++.|+.+.++.+++|+
T Consensus 262 ~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~ 341 (402)
T TIGR03542 262 KELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAGFKVYGGEHAPYL 341 (402)
T ss_pred HHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcCceecCCCceeEE
Confidence 8876 22222222223467889999998888864 35677778899999999999999989888888899999
Q ss_pred eeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 401 VVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
|++++. +. ++.+++++|++++||.+.||+.|
T Consensus 342 ~v~l~~-~~-~~~~l~~~l~~~~gv~v~pg~~f 372 (402)
T TIGR03542 342 WVKTPE-GI-SSWDFFDFLLYQYHVVGTPGSGF 372 (402)
T ss_pred EEECCC-CC-CHHHHHHHHHHhCCEEEeCchhh
Confidence 999853 22 56789999988889999999877
No 66
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.6e-45 Score=358.77 Aligned_cols=299 Identities=20% Similarity=0.315 Sum_probs=258.9
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
.+.|+|+.|.+++++++.+++++.+.+.+ ...|+ ..|.++||++++++++ ++++ +|++|+|+++++.+++.
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~-~~~Yp-~~g~~~Lr~aia~~~~------~~~~-~I~vt~Gs~e~i~~~~~ 99 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLD-HALYP-DGGATTLRQTIANKLH------VKME-QVLCGSGLDEVIQIISR 99 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHHh-cCcCC-CCCHHHHHHHHHHHhC------CCcc-eEEECCCHHHHHHHHHH
Confidence 47899999999999999999998887655 34564 5688999999999985 6787 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+++++||+|++++|+|+.|...+...|++++.++++ ++++|++.++++++++++++++++||||||.+++.+++++|+
T Consensus 100 ~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~--~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~ 177 (366)
T PRK01533 100 AVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN--NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFI 177 (366)
T ss_pred HhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC--CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHHH
Confidence 999999999999999999999999999999999986 567999999999988999999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
++|++++ ++|+||+|.+|.+++...+........+++++++||||.||++|+|+||+++++++++.+++.+ ..++.+
T Consensus 178 ~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~--~~~~~~ 254 (366)
T PRK01533 178 EGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVR--LPFNVS 254 (366)
T ss_pred HhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhc--CCCCcC
Confidence 9998876 5677999998876543322222223457999999999999999999999999999999998765 358899
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
.+.|.++..+|++ .+|.++.++.++++++.+.+.++.+|+++.+++++ |+|+++. ++.++.+.|++ +||.|+
T Consensus 255 ~~~q~aa~~~l~~-~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~~~n-f~~~~~~-----~~~~~~~~l~~-~GI~Vr 326 (366)
T PRK01533 255 SLAQKAATIAFGD-DEFIEEIVRVNTEGLRQYESFCKENEIPFYQSQTN-FIFLPVE-----NGGEIYEACAH-AGFIIR 326 (366)
T ss_pred HHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCcCc-EEEEeCC-----CHHHHHHHHHH-CCcEEc
Confidence 9999999999976 67888888889999999999999899998888777 6777763 35678888865 699998
Q ss_pred C
Q 013883 429 P 429 (434)
Q Consensus 429 p 429 (434)
+
T Consensus 327 ~ 327 (366)
T PRK01533 327 P 327 (366)
T ss_pred c
Confidence 7
No 67
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.3e-44 Score=329.22 Aligned_cols=322 Identities=24% Similarity=0.482 Sum_probs=285.4
Q ss_pred CeeEeCCCCCC----CCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 110 GAINLGQGFPN----FDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 110 ~~i~l~~g~p~----~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
.+|.|+.|.|. +++.+.+.+++.++++.+ .+.|+|..|+...|+++|+|+.+...-.++++ +|++|+|+++||+
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~-DV~ltsGC~qAIe 140 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTAD-DVVLTSGCSQAIE 140 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcC-ceEEeccchHHHH
Confidence 57999999775 667888999999999886 47899999999999999999988888889998 8999999999999
Q ss_pred HHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHH
Q 013883 185 ATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREE 263 (434)
Q Consensus 185 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~ 263 (434)
.++.++.+||..|++|.|+|+-|...+...|++++.+.+-+ .+|.+|++.+|.++.++|.+++++||+||.|.+++.+-
T Consensus 141 ~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~H 220 (447)
T KOG0259|consen 141 LAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDH 220 (447)
T ss_pred HHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHH
Confidence 99999999999999999999999999999999999999865 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeCh--------hhHH
Q 013883 264 LNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP--------HLTW 334 (434)
Q Consensus 264 l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~--------~~~~ 334 (434)
+++|+++|+++++.||.||+|.+++|++. +.++..+.. ---++.++++||.|=.||||+||++... .+++
T Consensus 221 L~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fss-iVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q 299 (447)
T KOG0259|consen 221 LKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSS-IVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQ 299 (447)
T ss_pred HHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccc-cCceEeecccccccccCCceeeeEEEecccccccchHHHH
Confidence 99999999999999999999999999985 345555543 2357899999999999999999999742 3344
Q ss_pred HHHHHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCE-eecCCeeEEEeeecCCC---C
Q 013883 335 GVRQAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFK-VFPSSGTYFVVVDHTPF---G 408 (434)
Q Consensus 335 ~l~~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~---~ 408 (434)
.+.+... .+.+++.+.|.|+-..|+. +++++++....++.+.+...+.|++. ++. ..+|+|.||+|+++.-. .
T Consensus 300 ~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~ 378 (447)
T KOG0259|consen 300 GIKNFLD-IIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPD 378 (447)
T ss_pred HHHHHHh-ccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhcc
Confidence 5555443 5678899999999999987 58899999999999999999999997 777 56899999999987543 4
Q ss_pred CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 409 HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 409 ~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++++.+|+.+|.+|..|.+.||..|.
T Consensus 379 ~~dD~dFc~kL~~Eesv~~LPG~af~ 404 (447)
T KOG0259|consen 379 IEDDVDFCQKLAREESVICLPGQAFG 404 (447)
T ss_pred ccccHHHHHHHhhhcceEEecccccc
Confidence 66889999999999999999999884
No 68
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-43 Score=353.28 Aligned_cols=314 Identities=26% Similarity=0.496 Sum_probs=267.7
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDG---KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
.++++|+.|.|++++++.+.+++.+.+++. ...|.+..|.+++|+++++++++.++..++++ +|++|+|+++++..
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~G~~~al~~ 111 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTAD-HIVMTCGAAGALNV 111 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcC-cEEEeCChHHHHHH
Confidence 467999999999888889999888877643 46798989999999999999999889888898 89999999999999
Q ss_pred HHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 186 TILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 186 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
++..++++||.|++++|+|..+...++..|++++.++.+++++++|++.++++++++++++++++||||||.+++.++++
T Consensus 112 ~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~ 191 (394)
T PRK06836 112 ALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLK 191 (394)
T ss_pred HHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHH
Confidence 99999999999999999999999999999999999999876689999999999998999999999999999999999999
Q ss_pred HHHHHHHH------cCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHH----
Q 013883 266 VIASLCIE------NDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG---- 335 (434)
Q Consensus 266 ~i~~la~~------~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~---- 335 (434)
+|+++|++ ||++||+||+|.++.+++... ..+....+++++++||||.+|++|+|+||+++++++.+.
T Consensus 192 ~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~ 269 (394)
T PRK06836 192 ALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEV--PYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLV 269 (394)
T ss_pred HHHHHHHHhhhccCCCeEEEEeccccccccCCCCC--CChHHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHH
Confidence 99999999 899999999999998865321 122223568999999999999999999999998776432
Q ss_pred --HHHHhhc-cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCH
Q 013883 336 --VRQAHSF-LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETD 412 (434)
Q Consensus 336 --l~~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (434)
+....+. ...+.+.+.|.++..++.+.. .+..++++++.+.+.|++.|+.+.+++||||+|+.++. .+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~---~~~ 341 (394)
T PRK06836 270 AALVFANRILGFVNAPALMQRVVAKCLDATV-----DVSIYKRNRDLLYDGLTELGFECVKPQGAFYLFPKSPE---EDD 341 (394)
T ss_pred HHHHHHhhccccccCCHHHHHHHHHHhCChH-----HHHHHHHHHHHHHHHHHhCCCEeecCCceEEEEEeCCC---CCH
Confidence 2112221 124678889999999998632 25678889999999999999999999999999998743 257
Q ss_pred HHHHHHHHHhcCeEEECCCCCC
Q 013883 413 IAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 413 ~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
.++++.| +++||.+.||+.|+
T Consensus 342 ~~~~~~l-~~~gv~v~~g~~f~ 362 (394)
T PRK06836 342 VAFCEKA-KKHNLLLVPGSGFG 362 (394)
T ss_pred HHHHHHH-HhCCEEEECchhcC
Confidence 7888766 55699999998874
No 69
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7e-44 Score=353.22 Aligned_cols=309 Identities=22% Similarity=0.323 Sum_probs=258.7
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC--CCCCCCCCCcHHHHHHHHHHHHhhc--CCCCCCCCcEEEcCChHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG--KNQYARGHGVPEFNSAIASRFKKDS--GLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~l~~~~--g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
..++|+.|.|++++++.+.+++.+++... ...|++ .|.++||+++++++++.+ |..++++ +|++|+|+++++..
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~-~I~it~Ga~~al~~ 106 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPA-NISVGNGSDELIRS 106 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHH-HEEEcCChHHHHHH
Confidence 57899999999999999999999887764 356865 699999999999998776 5778888 89999999999998
Q ss_pred HHHHccCCCC-eEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCC
Q 013883 186 TILGLINPGD-EVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFT 260 (434)
Q Consensus 186 ~~~~l~~~gd-~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~ 260 (434)
++.+++.+|| .|++++|+|..|...++..|++++.++++++++++|++.++++++ +++++|++++||||||.+++
T Consensus 107 ~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s 186 (374)
T PRK02610 107 LLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLT 186 (374)
T ss_pred HHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCC
Confidence 8888888886 899999999999999999999999999876568999999999886 47899999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHh
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAH 340 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~ 340 (434)
.+++++|++++ ++++||+||+|.+|.+. ..+..+. ..+++++++||||.+|++|+|+||+++++++++.+.+.+
T Consensus 187 ~~~l~~l~~~~--~~~~iI~De~Y~~~~~~---~~~~~~~-~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~ 260 (374)
T PRK02610 187 AAELEWLRSLP--EDILVVIDEAYFEFSQT---TLVGELA-QHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVR 260 (374)
T ss_pred HHHHHHHHhcc--CCcEEEEeccccccCcc---chHHHHh-cCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhc
Confidence 99999999876 49999999999998542 1222222 246789999999999999999999999999999888766
Q ss_pred hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHH
Q 013883 341 SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYL 419 (434)
Q Consensus 341 ~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 419 (434)
..++.+.+.|.++..+|++.+.+.+.++..++ +++.+.+.|+++ ++.+ .+++++|+|++++. +. ++.+++++|
T Consensus 261 --~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~-~r~~l~~~L~~~~~~~~-~p~~g~f~~~~l~~-~~-~~~~~~~~l 334 (374)
T PRK02610 261 --LPYNLPSFSQLAAQLALEHRQELLAAIPEILQ-ERDRLYQALQELPQLRV-WPSAANFLYLRLSQ-DA-ALAALHQAL 334 (374)
T ss_pred --CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHH-HHHHHHHHHHhCCCcEe-CCCcceEEEEeCCC-CC-CHHHHHHHH
Confidence 35678899999999999876667776666555 477788888876 6765 46778899998853 22 567888877
Q ss_pred HHhcCeEEECCCCC
Q 013883 420 IKEVGVVAIPTSVF 433 (434)
Q Consensus 420 l~~~GV~v~pG~~F 433 (434)
+++||.|.++..|
T Consensus 335 -~~~gi~v~~~~~~ 347 (374)
T PRK02610 335 -KAQGTLVRHTGGG 347 (374)
T ss_pred -HHCCEEEEeCCCe
Confidence 4569999886543
No 70
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=3.3e-45 Score=361.64 Aligned_cols=320 Identities=33% Similarity=0.528 Sum_probs=273.3
Q ss_pred CeeEeCCCCCCCC----CcHHHHHHHHH--HHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 110 GAINLGQGFPNFD----GPDFVKDAAIQ--AIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 110 ~~i~l~~g~p~~~----~~~~v~~~~~~--~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
++|||+.|.+... +++.+.+++.+ ........|++..|.++||+++++++++..|..++++.+|++++|+.+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 6899999988776 33444444443 22345689999999999999999999988898888875799999999999
Q ss_pred HHHHHHc-cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhccc------CCcEEEecCCCCCc
Q 013883 184 AATILGL-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISK------NTRAILMNTPHNPT 255 (434)
Q Consensus 184 ~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~i~~~~p~NPT 255 (434)
..++..+ .++||+|++++|+|+.+...++..|++++.++++. .++.+|++.|++.+++ ++++|++++|||||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999 89999999999999999999999999999999863 5789999999999987 56899999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC-ccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHH
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDH-ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~ 334 (434)
|.+++.+++++|+++|++||++||+||+|.++.++... ...........+++++.||||.||++|+|+||+++++++++
T Consensus 162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~ 241 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIE 241 (363)
T ss_dssp TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHH
T ss_pred ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchhhhhh
Confidence 99999999999999999999999999999999987542 12122223345699999999999999999999999999999
Q ss_pred HHHHHhhccccCCchHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCC
Q 013883 335 GVRQAHSFLTFATSTPMQWAATAALRAPE---TYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHET 411 (434)
Q Consensus 335 ~l~~~~~~~~~~~~~~~q~a~~~~L~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 411 (434)
.++........ +.+.|.++..+|.+.. +++++++++++++++.+.+.|++.|+.+.++++++|+|+++... +
T Consensus 242 ~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~---~ 316 (363)
T PF00155_consen 242 RLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPEAGFFLWVRLDPN---D 316 (363)
T ss_dssp HHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHSBSSEEEEEESHH---H
T ss_pred hhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeeccCccEEEEEcccc---h
Confidence 99887764444 8888989988888754 38899999999999999999999999999999999999987542 4
Q ss_pred HHHHHHHHHHhcCeEEECCCCCC
Q 013883 412 DIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+.+++++|++++||.+.||..|+
T Consensus 317 ~~~l~~~L~~~~gi~v~pg~~~~ 339 (363)
T PF00155_consen 317 AEELAQELLEEYGILVRPGSYFG 339 (363)
T ss_dssp HHHHHHHHHHHHTEEEEEGGGGT
T ss_pred HHHHHHHHHHhCCEEEEecCCCC
Confidence 67899999988899999999874
No 71
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.2e-43 Score=356.71 Aligned_cols=319 Identities=21% Similarity=0.312 Sum_probs=253.8
Q ss_pred cCCeeEeCCCCCCCCC--cHHHHHHHHHHHHcC-----CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 108 KHGAINLGQGFPNFDG--PDFVKDAAIQAIRDG-----KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~--~~~v~~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
.++.|+|+.|.|+..+ .+.+.+++.+.+.+. ...|++..|.++||+++++++.+.+|..++++ +|++|+|++
T Consensus 29 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~-~I~it~Ga~ 107 (416)
T PRK09440 29 TPGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQ-NIALTNGSQ 107 (416)
T ss_pred CCCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChh-hEEEccChH
Confidence 3578999999997544 246667776665442 25799999999999999999999999999998 899999999
Q ss_pred HHHHHHHHHccC-----CCCeEEE-cCCCchhHHHHHHHcCC----EEEEEEcCCC--CCCCCHHHHHhhcccCCcEEEe
Q 013883 181 EAIAATILGLIN-----PGDEVIL-FAPFYDSYEATLSMAGA----KIKCITLRPP--DFAIPIEELKSTISKNTRAILM 248 (434)
Q Consensus 181 ~ai~~~~~~l~~-----~gd~Vlv-~~p~y~~~~~~~~~~G~----~~~~v~~~~~--~~~~d~~~l~~~i~~~~~~i~~ 248 (434)
+++.+++.++++ +||.|++ ++|+|+.|...+...|. ....++++.+ ++++|++.++ +.++++++++
T Consensus 108 ~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l 185 (416)
T PRK09440 108 SAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICV 185 (416)
T ss_pred HHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEEEE
Confidence 999999999985 6899999 79999999886654432 2222334332 3679999997 4567899999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEe
Q 013883 249 NTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 328 (434)
Q Consensus 249 ~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~ 328 (434)
++||||||.+++.+++++|+++|++||++||+||+|..+.......... ....+++|+++||||. +++|+|+||+++
T Consensus 186 ~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~--~~~~~~vI~~~SfSK~-~~pGlRiG~~i~ 262 (416)
T PRK09440 186 SRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEAT--PLWNPNIILCMSLSKL-GLPGVRCGIVIA 262 (416)
T ss_pred ecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcC--ccccCCeEEEeccccc-CCCcceEEEEeC
Confidence 9999999999999999999999999999999999997643211111111 1125789999999995 899999999999
Q ss_pred ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCCh--HHHHH-HHHHHHHHHHHHHHHhhhC----CCEeecCCeeEEEe
Q 013883 329 PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPE--TYYEE-LKRDYSAKKAILVEGLNAV----GFKVFPSSGTYFVV 401 (434)
Q Consensus 329 ~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~--~~~~~-~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~ 401 (434)
++++++.+.........+++.+.|.++..+|++.+ ++..+ ++..|+++++.+++.|++. ++.+.+++|++|+|
T Consensus 263 ~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw 342 (416)
T PRK09440 263 DEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLW 342 (416)
T ss_pred CHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEE
Confidence 99999999888877777889999999999998753 33333 5777888888888888653 46677899999999
Q ss_pred eecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 402 VDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 402 ~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+++++.+. ++.++++.| +++||.++||+.|+
T Consensus 343 ~~~~~~~~-~~~~~~~~l-~~~gV~v~pg~~F~ 373 (416)
T PRK09440 343 LWFKDLPI-TTEELYQRL-KARGVLVVPGHYFF 373 (416)
T ss_pred EECCCCCC-CHHHHHHHH-HHCCEEEechHhhC
Confidence 99865333 467888876 55799999999884
No 72
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-44 Score=351.82 Aligned_cols=303 Identities=23% Similarity=0.359 Sum_probs=261.0
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.++|+.|.+.+++++.+.+++.+.+.. ..|.|..|.++||++++++++ ++++ +|++|+|+++++..++.+
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~--~~~~p~~g~~~lr~~ia~~~~------~~~~-~i~~t~G~~~~l~~~~~~ 100 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE--LALYPDGYAPELRTKVAKHLG------VDEE-QLLFGAGLDEVIQMISRA 100 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH--hhcCCCCcHHHHHHHHHHHhC------CCHH-HEEECCCHHHHHHHHHHH
Confidence 6799999988888888899988887754 345566799999999999985 6677 899999999999999999
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
++++||.|++++|+|+.+...+...|++++.+|++ ++++|++.++++++++++++++++||||||.+++.+++.+|++
T Consensus 101 ~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~ 178 (359)
T PRK03158 101 LLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK--DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLE 178 (359)
T ss_pred HhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC--CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999997 5788999999999889999999999999999999999999888
Q ss_pred HHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCch
Q 013883 270 LCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATST 349 (434)
Q Consensus 270 la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~ 349 (434)
.|+ +|++||+||+|.++.+++............+++++++||||.||++|+|+||++++++++++++..+. .++.+.
T Consensus 179 ~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~--~~~~~~ 255 (359)
T PRK03158 179 SVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARP--PFNTTR 255 (359)
T ss_pred hCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcC--CCCCCH
Confidence 774 69999999999998876533322222233578999999999999999999999999999999887664 478899
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 350 PMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 350 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
+.|.++..+|++ .+++++.++.++++++.+.+.|++.|+.+.+++ ++|+|+++.. ++.+++++|++ +||.+.|
T Consensus 256 ~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-g~~i~~~~~~----~~~~~~~~l~~-~gv~v~~ 328 (359)
T PRK03158 256 IAQYAAIAALED-QAFLKECVEKNAEGLEQYYAFCKEYGLFYYPSQ-TNFIFVDTGR----DANELFEALLK-KGYIVRS 328 (359)
T ss_pred HHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCCeeCCCc-CcEEEEECCC----CHHHHHHHHHH-CCeEEee
Confidence 999999999986 568888888899999999999998888887655 5688888631 47789998875 5999999
Q ss_pred CCCC
Q 013883 430 TSVF 433 (434)
Q Consensus 430 G~~F 433 (434)
|+.|
T Consensus 329 g~~f 332 (359)
T PRK03158 329 GAAL 332 (359)
T ss_pred CCCC
Confidence 9887
No 73
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.2e-43 Score=347.06 Aligned_cols=302 Identities=22% Similarity=0.383 Sum_probs=257.2
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.+||+.|.|..++++.+.+++.+.+.. ...|++. +.++||++++++++ ++++ +|++|+|+++++..++.+
T Consensus 20 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~-~~~Y~~~-~~~~lr~~ia~~~~------~~~~-~i~it~Ga~~~l~~~~~~ 90 (354)
T PRK06358 20 MILDFSANINPLGVPESLKQAITENLDK-LVEYPDP-DYLELRKRIASFEQ------LDLE-NVILGNGATELIFNIVKV 90 (354)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHh-hhcCCCc-cHHHHHHHHHHHhC------CChh-hEEECCCHHHHHHHHHHH
Confidence 4799999988888888999988887653 4668764 68899999999984 7788 899999999999999988
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+ .+ ++|++++|+|+.|...++..|++++.+++++ .++.+| +.+++.+.++++++++++||||||.+++.+++++|+
T Consensus 91 ~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~ 167 (354)
T PRK06358 91 T-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKIL 167 (354)
T ss_pred h-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHH
Confidence 6 44 6899999999999999999999999999975 357889 666666777899999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhhccccCC
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~~~~ 347 (434)
++|++||++||+||+|.+|.+++...+........+++++++||||.+|++|+|+||++++ +.+++.+...+. .++.
T Consensus 168 ~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~--~~~~ 245 (354)
T PRK06358 168 DKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE--PWSI 245 (354)
T ss_pred HHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC--CCcc
Confidence 9999999999999999999887644333223334579999999999999999999999985 678888877654 5778
Q ss_pred chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 348 STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
+.+.|.++..+|++ .+++++.++.++++++.+.+.|++. |+.+.+++|+ |+|+++++ ..+++++|++ +||.
T Consensus 246 ~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~-f~~~~~~~-----~~~~~~~l~~-~gI~ 317 (354)
T PRK06358 246 NTFADLAGQTLLDD-KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVN-FIFFKLEK-----PIDLRKELLK-KGIL 317 (354)
T ss_pred hHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcce-EEEEEcCc-----hHHHHHHHHH-CCeE
Confidence 89999999999975 5678889999999999999999987 7888888777 67887742 4688888876 5999
Q ss_pred EECCCCC
Q 013883 427 AIPTSVF 433 (434)
Q Consensus 427 v~pG~~F 433 (434)
+.||+.|
T Consensus 318 v~~~~~f 324 (354)
T PRK06358 318 IRSCSNY 324 (354)
T ss_pred EEECCCC
Confidence 9999887
No 74
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.1e-42 Score=370.79 Aligned_cols=320 Identities=16% Similarity=0.230 Sum_probs=263.9
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
++++|+|+.|.|++++|+.+++++.+++.+.. + ..|.+++++++++++.+.+|++.+++++|++++|+++++..++
T Consensus 696 g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~--~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll 771 (1082)
T PLN02672 696 ESSLIHMDVDESFLPVPSAVKASIFESFVRQN--I--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLV 771 (1082)
T ss_pred CCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcC--C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHH
Confidence 45789999999999999999999988775432 2 3467889999999999999998876558999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhccc-CCcEEEecCCC-CCcccCCCHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISK-NTRAILMNTPH-NPTGKMFTREEL 264 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~-~~~~i~~~~p~-NPTG~~~~~e~l 264 (434)
.++++|||+|+++.|+|+.|...++..|++++.+|+++ +++.+|++.+++++++ +.++|++++|| ||||.+++.+++
T Consensus 772 ~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeL 851 (1082)
T PLN02672 772 LCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEI 851 (1082)
T ss_pred HHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHH
Confidence 99999999999999999999999999999999999974 4689999999999976 45689999996 999999999999
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCCCc---ccc----CCCC--CCCceEEEccCChhhccccceeeeEEeCh-hhHH
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMDHI---SIA----SLPG--MYERTVTMNSLGKTFSLTGWKIGWAIAPP-HLTW 334 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~~~---~~~----~~~~--~~~~~i~i~S~SK~~g~~G~R~G~~~~~~-~~~~ 334 (434)
++|+++|++||++||+||+|.++.|++... ++. .+.. ..+++++++||||.++++|+|+||+++++ ++++
T Consensus 852 e~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~ 931 (1082)
T PLN02672 852 EEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLID 931 (1082)
T ss_pred HHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHH
Confidence 999999999999999999999999875431 111 1111 12479999999999999999999999975 4888
Q ss_pred HHHHHhhccccCCchHHHHHHHHHH---hC-C---hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCC
Q 013883 335 GVRQAHSFLTFATSTPMQWAATAAL---RA-P---ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF 407 (434)
Q Consensus 335 ~l~~~~~~~~~~~~~~~q~a~~~~L---~~-~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 407 (434)
.++..... ..+....|.++..++ .+ . .+++++.++.++++++.+.+.|++.|+.+.+++||||+|+++..+
T Consensus 932 ~l~~~~~~--s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~PeGGFfLwl~l~~~ 1009 (1082)
T PLN02672 932 AFHSAPGL--SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWDVLEPQGGISMVAKPSAY 1009 (1082)
T ss_pred HHHHhhhh--cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecCCcEEEEEEEcccc
Confidence 88765432 222333444444433 21 2 345777888899999999999999999999999999999976421
Q ss_pred C---------------CCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 408 G---------------HETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 408 ~---------------~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
. ..++.+++++|++++||.+.||+.|
T Consensus 1010 l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~F 1050 (1082)
T PLN02672 1010 LGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWT 1050 (1082)
T ss_pred ccccccccccccccccCCCHHHHHHHHHHcCCEEEecCccc
Confidence 0 1257889999999899999999876
No 75
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-43 Score=346.77 Aligned_cols=305 Identities=23% Similarity=0.360 Sum_probs=259.1
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
.++|+|+.|.|.+.+++.+.+++.+.... ...|++..| .+||++++++++ ++++ +|++|+|+++++..++.
T Consensus 36 ~~~i~l~~~~~~~~~~~~~~~al~~~~~~-~~~Y~~~~g-~~lr~~ia~~~~------~~~~-~i~~t~G~~~~l~~~~~ 106 (371)
T PRK05166 36 PRIAKLGSNENPLGPSPAVRRAFADIAEL-LRLYPDPQG-RALREAIAARTG------VPAD-RIILGNGSEDLIAVICR 106 (371)
T ss_pred cceEEcCCCCCCCCCCHHHHHHHHHHHHH-hhcCCCCcH-HHHHHHHHHHhC------cCHH-HEEEcCCHHHHHHHHHH
Confidence 37899999988888888888888765443 567999888 499999999874 5677 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+++++||+|++++|+|+.+...++..|++++.+++++ ++++|++.++++++++++++++++||||||.+++.+++++|+
T Consensus 107 ~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~ 185 (371)
T PRK05166 107 AVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP-DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVL 185 (371)
T ss_pred HhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC-CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999875 678999999999988999999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccC-CCCCCCceEEEccCChhhccccceeeeEEe-ChhhHHHHHHHhhccccC
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIAS-LPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~-~~~~~~~l~~~~~~~~~~ 346 (434)
++|++ +++||+||+|.+|.+++...+... +....+++++++||||.||++|+|+||+++ ++++++.+++.+. .++
T Consensus 186 ~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~--~~~ 262 (371)
T PRK05166 186 DATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRT--PFN 262 (371)
T ss_pred HhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhcc--CCC
Confidence 99874 889999999999986544433322 223346899999999999999999999876 6788888876553 567
Q ss_pred CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 347 TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
.+.+.|.++..+|.+ .+++++.++.++++++.+.+.|++.|+.+.+ .+++|+|+++.. ++.++++.|+++ ||.
T Consensus 263 ~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p-~~g~fl~~~~~~----~~~~l~~~l~~~-gi~ 335 (371)
T PRK05166 263 VNGAAQAAALAALDD-EEHLAKGVALALAERERLKKELAEMGYRIAP-SRANFLFFDARR----PASAVAEALLRQ-GVI 335 (371)
T ss_pred CCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCC-CcCCEEEEeCCC----CHHHHHHHHHHC-CeE
Confidence 888999888888876 5688988999999999999999999988655 456688988632 477899988765 999
Q ss_pred EECCCCC
Q 013883 427 AIPTSVF 433 (434)
Q Consensus 427 v~pG~~F 433 (434)
+.||..|
T Consensus 336 v~p~~~~ 342 (371)
T PRK05166 336 VKPWKQP 342 (371)
T ss_pred EecCCCC
Confidence 9999754
No 76
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-43 Score=347.10 Aligned_cols=305 Identities=20% Similarity=0.310 Sum_probs=260.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc---CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD---GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..|+|+.|.|++++++.+.+++.+++.+ ....|++ .|.++||+++++++.+.+|..++++ +|++|+|+++++.++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~-~I~it~G~~~~l~~~ 104 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVE-NVWAANGSNEILQQL 104 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChh-hEEECCCHHHHHHHH
Confidence 4689999999999999999999988754 3467865 5889999999999999999999998 899999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+++++++||.|+++.|+|..|...+...|.+++.++.++ ++++|++.+++++++ ++++|++++||||||.+++.++++
T Consensus 105 ~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~ 183 (368)
T PRK03317 105 LQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAA-DFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVE 183 (368)
T ss_pred HHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCC-CCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 999999999999999999999999999999998887753 689999999999874 789999999999999999999988
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTF 345 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~ 345 (434)
+|+++| +++||+||+|.+|.+++.. ....+....+++++++||||.+|++|+|+||+++++++++.++..+ ..+
T Consensus 184 ~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~--~~~ 257 (368)
T PRK03317 184 AILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVR--LPY 257 (368)
T ss_pred HHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcC--CCC
Confidence 888776 6999999999998766532 2222222245899999999999999999999999999999887665 367
Q ss_pred CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCe
Q 013883 346 ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGV 425 (434)
Q Consensus 346 ~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV 425 (434)
+.+.+.|.++..+|++.+ ++.+.+++++++++.+.+.|++.|+.+.+++++|++|.++. +..++.+.|++ +||
T Consensus 258 ~~s~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~-~Gv 330 (368)
T PRK03317 258 HLSAVTQAAARAALRHAD-ELLASVAALRAERDRVVAWLRELGLRVAPSDANFVLFGRFA-----DRHAVWQGLLD-RGV 330 (368)
T ss_pred CCCHHHHHHHHHHhhCHH-HHHHHHHHHHHHHHHHHHHHHHCCCEeCCCCCcEEEEeccC-----CHHHHHHHHHH-CCE
Confidence 888999999999998744 34455677889999999999999999888999999886652 46678877765 599
Q ss_pred EEECC
Q 013883 426 VAIPT 430 (434)
Q Consensus 426 ~v~pG 430 (434)
.+.++
T Consensus 331 ~v~~~ 335 (368)
T PRK03317 331 LIRDV 335 (368)
T ss_pred EEEeC
Confidence 99885
No 77
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=9e-43 Score=343.74 Aligned_cols=301 Identities=23% Similarity=0.338 Sum_probs=250.1
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.|+|+.|.+.+++++.+.+++.+.+.. ...|++.. ..+||++++++++ ++++ +|++|+|+++++.+++++
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~-~~~Y~~~~-~~~Lr~aia~~~~------v~~~-~I~it~G~~~~i~~~~~~ 93 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSA-LRHYPDPD-YRELRLALAQHHQ------LPPE-WILPGNGAAELLTWAGRE 93 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHH-hhcCCCcC-HHHHHHHHHHHhC------cChh-hEEECCCHHHHHHHHHHH
Confidence 6799999988899999999988877764 56798764 5899999999983 7787 899999999999999988
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCC----CCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDF----AIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~----~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+. +||.|++++|+|..|...++..|++++.+++++++. ..+++.+++.. ++++++++++||||||.+++.+++
T Consensus 94 l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~~~~l- 170 (360)
T PRK07392 94 LA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWSREAI- 170 (360)
T ss_pred hC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcCHHHH-
Confidence 65 689999999999999999999999999999975332 25677776654 468999999999999999997765
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTF 345 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~ 345 (434)
.++++++++ +|+||+|.+|.+++...++.......+++++++||||.||++|+|+||+++++++++.+...+ ..+
T Consensus 171 --~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~--~~~ 245 (360)
T PRK07392 171 --LPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWR--DPW 245 (360)
T ss_pred --HHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhC--CCC
Confidence 555667885 666999999987654333333333457899999999999999999999999999998887654 347
Q ss_pred CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcC
Q 013883 346 ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVG 424 (434)
Q Consensus 346 ~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~G 424 (434)
+++.+.|.++..+|++ .++.+++++.++++++.+.+.|+++ |+.+.+ ++++|+|+++.. ++.++++++++++|
T Consensus 246 ~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~~~~~----~~~~l~~~ll~~~g 319 (360)
T PRK07392 246 PVNGLAAAAAIAALAD-RDFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLVQSQG----SALQLQEKLLQQHR 319 (360)
T ss_pred CCCHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEEEcCC----CHHHHHHHHHhhCC
Confidence 8899999999999986 5678888888999999999999886 787755 677889988642 47789988888889
Q ss_pred eEEECCCCC
Q 013883 425 VVAIPTSVF 433 (434)
Q Consensus 425 V~v~pG~~F 433 (434)
|.+.||..|
T Consensus 320 v~v~pg~~f 328 (360)
T PRK07392 320 ILIRDCLSF 328 (360)
T ss_pred EEEEeCCCC
Confidence 999999987
No 78
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-43 Score=344.38 Aligned_cols=298 Identities=21% Similarity=0.339 Sum_probs=253.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
++|+|+.|.+++++++.+.+++.+++.. ...|++ .|.++||++++++++ ++++ +|++|+|+++++.+++++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~-~~~~~lr~~ia~~~~------~~~~-~I~it~G~~~al~~~~~~ 101 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAER-VHSYPK-ASHADLTAALADRWD------VSPE-QVWLANGGDGALDYLARA 101 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhh-hhcCCC-CCHHHHHHHHHHHhC------CCcc-eEEECCCHHHHHHHHHHH
Confidence 7899999999999999999988887653 567865 688999999999984 7788 899999999999999999
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
++++||.|++++|+|..|...+...|++++.++++. +++.+|++.+++.. +++++|++++||||||.+++.+++++|+
T Consensus 102 ~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~~~~~l~ 180 (357)
T PRK14809 102 MLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLDEVEALA 180 (357)
T ss_pred hcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHHHHHHHH
Confidence 999999999999999999998999999999999875 45788888887765 4689999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
++|++ +++||+||+|.+|.+++. .+..+ ...+++++++||||.||++|+|+||+++++++++.+.+.. ..++.+
T Consensus 181 ~~~~~-~~~iI~De~y~~~~~~~~--~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~--~~~~~~ 254 (357)
T PRK14809 181 ERTDE-ETLVVVDEAYGEFAERPS--AVALV-EERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVN--TPFAAS 254 (357)
T ss_pred HhCcc-CcEEEEechhhhccCCch--hHHHH-hhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhC--CCCCCC
Confidence 99875 789999999999876432 12222 2357899999999999999999999999999999887764 357788
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
.+.|.++..+|.+ ++++++.++.++++++.+.+.|+..++ +.+++|+|+++. +..++++.| +++||.|.
T Consensus 255 ~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~----~~~g~f~~~~~~-----~~~~~~~~l-~~~gv~v~ 323 (357)
T PRK14809 255 ELACRAGLAALDD-DEHVERTVETARWAREYIREELDAPTW----ESAGNFVLAEVG-----DASAVAEAA-QERGVIVR 323 (357)
T ss_pred HHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHhcCccC----CCCCCEEEEECC-----CHHHHHHHH-HHCCEEEE
Confidence 8999999999976 678999999999999999999976433 356778888763 467888876 55699999
Q ss_pred CCCCCC
Q 013883 429 PTSVFY 434 (434)
Q Consensus 429 pG~~F~ 434 (434)
||+.|.
T Consensus 324 ~g~~f~ 329 (357)
T PRK14809 324 DCTSFG 329 (357)
T ss_pred ECccCC
Confidence 999873
No 79
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=7.1e-43 Score=345.00 Aligned_cols=294 Identities=20% Similarity=0.299 Sum_probs=253.3
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
++.++|+.|.|++++++.+.+++.+++.. ...|++.. ..+||++++++++ ++++ +|++|+|+++++.+++.
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~Y~~~~-~~~Lr~aia~~~~------v~~e-~I~it~Gs~~ai~~~~~ 113 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAAL-SGRYDLEL-EDDLRTLFAAQEG------LPAD-HVMAYAGSSEPLNYAVL 113 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHH-hcCCCCch-HHHHHHHHHHHhC------cChh-hEEEcCChHHHHHHHHH
Confidence 37899999999999999999999887654 34687764 8899999999774 6788 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+++++||+|++++|+|+.|...++..|++++.+++++ ++.+|++.+++. .++++++++++||||||.+++.+++++|+
T Consensus 114 ~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~ 191 (370)
T PRK09105 114 AFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA-DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLL 191 (370)
T ss_pred HHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC-CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHH
Confidence 9999999999999999999999999999999999875 688999999887 46789999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
+.+ +++++||+||+|.+|... .+...+....+++++++||||.||++|+|+||+++++++++.+... ..+..+
T Consensus 192 ~~~-~~~~~lIvDEaY~~f~~~---~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~---~~~~~~ 264 (370)
T PRK09105 192 ANK-PAGSVLLVDEAYIHFSDA---PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF---GHNPLP 264 (370)
T ss_pred HhC-CCCcEEEEECchHHhccC---cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc---CCCCcC
Confidence 875 469999999999876432 2333343446789999999999999999999999999999888765 245578
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v 427 (434)
.+.|.++..+|.+ .+|+++.++.++++++.+.+.|+++|+.+.+++++||+ +++. .+..+++++|+++ ||.+
T Consensus 265 ~~~~~aa~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~f~~-~~~~----~~~~~l~~~L~~~-gI~v 336 (370)
T PRK09105 265 VPAAAAGLASLRD-PKLVPQRRAENAAVREDTIAWLKKKGYKCTPSQANCFM-VDVK----RPAKAVADAMAKQ-GVFI 336 (370)
T ss_pred HHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCcEEE-EeCC----CCHHHHHHHHHHC-CcEE
Confidence 8889999999986 67899999999999999999999999998899999875 6653 1577899999866 9998
No 80
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-42 Score=341.05 Aligned_cols=300 Identities=21% Similarity=0.351 Sum_probs=252.9
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
.++|+|+.|.+++++++.+.+++... . ....|++. +..+||++++++++ ++++ +|++|+|+++++..++.
T Consensus 52 ~~~i~l~~n~~p~~~~~~v~~a~~~~-~-~~~~Yp~~-~~~~lr~~ia~~~~------~~~~-~I~~t~Ga~~~i~~~~~ 121 (380)
T PLN03026 52 EDIVKLDANENPYGPPPEVLEALGNM-K-FPYVYPDP-ESRRLRAALAEDSG------LESE-NILVGCGADELIDLLMR 121 (380)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHhh-H-hhccCCCC-CHHHHHHHHHHHhC------cChh-hEEEcCCHHHHHHHHHH
Confidence 47899999998898888888877542 1 23457664 67899999999986 6777 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc-ccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI-SKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i-~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
+++++||+|++++|+|..|...++..|++++.++.++ ++++|++.+++++ .+++++|++++||||||.+++.+++++|
T Consensus 122 ~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l 200 (380)
T PLN03026 122 CVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTP-DFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKI 200 (380)
T ss_pred HhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCC-CCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999864 6889999999998 6789999999999999999999998888
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~ 347 (434)
++.+ ++||+||+|.+|.+++.. . ......+++++++||||.||++|+|+||+++++++++.+.+.+. .++.
T Consensus 201 ~~~~----~~vi~DeaY~~~~~~~~~--~-~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~--~~~~ 271 (380)
T PLN03026 201 LELP----ILVVLDEAYIEFSTQESR--M-KWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV 271 (380)
T ss_pred HhcC----CEEEEECcchhhcCCcch--H-HHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcC--CCCC
Confidence 8653 899999999998764322 1 12224579999999999999999999999999999998887764 4778
Q ss_pred chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEE
Q 013883 348 STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v 427 (434)
+.+.|.++..+|++ .++++++++.++++|+.+.+.|+++++....+++++|+|+++.+ + .++.+++++|+ ++||.|
T Consensus 272 ~~~~q~aa~~aL~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~-~~~~~~~~~l~-~~gI~v 347 (380)
T PLN03026 272 SVAAEVAACAALSN-PKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTS-G-RDAKKLKEDLA-KMGVMV 347 (380)
T ss_pred CHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCC-C-CCHHHHHHHHH-HCCeEE
Confidence 89999999999986 57889999999999999999999986433356677788888743 2 24678988887 569999
Q ss_pred ECCCC
Q 013883 428 IPTSV 432 (434)
Q Consensus 428 ~pG~~ 432 (434)
++|+.
T Consensus 348 ~~~~~ 352 (380)
T PLN03026 348 RHYNS 352 (380)
T ss_pred EECCC
Confidence 99854
No 81
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=9.3e-42 Score=335.92 Aligned_cols=301 Identities=18% Similarity=0.323 Sum_probs=250.5
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
++++|+.|.+++++|+.+.+++.+.+.. ...|++. +..+||++++++++ ++++ +|++|+|+++++..++..
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~~~y~~~-~~~~lr~~ia~~~~------~~~~-~i~it~Ga~~~l~~~~~~ 91 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDC-AERYPDV-EYRHLHQALARHHQ------VPAS-WILAGNGETESIFAVVSG 91 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHh-cccCcCc-cHHHHHHHHHHHhC------cChh-hEEECCCHHHHHHHHHHH
Confidence 6799999999999999999999887764 3468764 68999999999985 6787 899999999999999887
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+ .+|| +++++|+|..|...++..|++++.+|+++ .++.+| +.+++.+.+++++|++++||||||.+++.+++++|+
T Consensus 92 l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~ 168 (356)
T PRK08056 92 L-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIA 168 (356)
T ss_pred h-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHHHH
Confidence 6 6775 78889999999999999999999999975 346666 455566778899999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhhccccCC
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~~~~ 347 (434)
++|++|+++||+||+|.+|.+++.. .+..+. ..+++++++||||.||++|+|+||++++ +++++.+++.. ..++.
T Consensus 169 ~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~-~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~--~~~~~ 244 (356)
T PRK08056 169 ERCKSLNIALILDEAFIDFIPDETG-FIPQLA-DNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQ--MPWSI 244 (356)
T ss_pred HHHHhcCCEEEEecchhccCCcchH-HHHHhc-cCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhC--CCCch
Confidence 9999999999999999998865421 111122 2468999999999999999999999984 67777776543 35677
Q ss_pred chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 348 STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
+.+.|.++..+|++ .+|.+++++.++++++.+.+.|+++ |+.+.+++ ++|+|+++.. ++.+++++|++ +||.
T Consensus 245 ~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~l~~-~gI~ 317 (356)
T PRK08056 245 NAFAALAGEVILQD-RAYQQATWQWLAEEGARFYQALCALPLLTVWPGR-ANYLFLRCER----PDIDLQRALLT-QRIL 317 (356)
T ss_pred hHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCC-CcEEEEEcCC----ChHHHHHHHHH-CCeE
Confidence 88889888888864 6688888999999999999999887 78776664 6678888742 35688888875 6999
Q ss_pred EECCCCC
Q 013883 427 AIPTSVF 433 (434)
Q Consensus 427 v~pG~~F 433 (434)
|.||+.|
T Consensus 318 v~~~~~f 324 (356)
T PRK08056 318 IRSCANY 324 (356)
T ss_pred EEECCCC
Confidence 9999987
No 82
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-42 Score=333.47 Aligned_cols=299 Identities=31% Similarity=0.492 Sum_probs=263.3
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.++|+.+...+++++.+.+++.+.+. ..+.|++. ...+|+++++++++. ++++ +|++++|++++|..++++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~-~~~rYPd~-~~~~l~~a~a~~~~~-----~~~~-~V~~gnGsde~i~~l~~~ 94 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALD-KLNRYPDP-DYRELRAALAEYYGV-----VDPE-NVLVGNGSDELIELLVRA 94 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHH-hhccCCCC-cHHHHHHHHHHHhCC-----CCcc-eEEEcCChHHHHHHHHHH
Confidence 579999998889999999998888776 46789988 568999999999873 5566 899999999999999999
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
++.+||+|+++.|+|..|...++..|++++.++..+ +.+|++.+.+++.+++++|++||||||||..++.++++++++
T Consensus 95 ~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~--~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~ 172 (356)
T COG0079 95 FVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE--FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLE 172 (356)
T ss_pred hhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc--cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999985 999999999999989999999999999999999999999999
Q ss_pred HHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCch
Q 013883 270 LCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATST 349 (434)
Q Consensus 270 la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~ 349 (434)
.+.+ +.+||+||||.+|.. .+...+...++|++++.||||.||++|+|+||+++++++++.+++++. .|+.+.
T Consensus 173 ~~~~-~~~vVvDEAY~eF~~----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~--p~~v~~ 245 (356)
T COG0079 173 ALPE-GGLVVIDEAYIEFSP----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRP--PFNVSS 245 (356)
T ss_pred hCCC-CcEEEEeCchhhcCC----chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcC--CCCCCH
Confidence 8888 999999999999864 222222225678999999999999999999999999999999999874 789999
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCE-eecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 350 PMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFK-VFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 350 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
+++.++.++|++. +++++.++.+.+.|+++.+.|+++|+. +.+++++ |+++++.. .. ...+.++|+++ ||.++
T Consensus 246 ~a~~aa~aal~~~-~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~aN-Fvlv~~~~--~~-~~~l~~~L~~~-giivR 319 (356)
T COG0079 246 PALAAAIAALRDA-DYLEESVERIREERERLYAALKALGLFGVFPSQAN-FVLVRVPD--AE-AAALAEALLKK-GILVR 319 (356)
T ss_pred HHHHHHHHHcccH-HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCc-EEEEECCC--cc-HHHHHHHHHHC-CEEEE
Confidence 9999999999985 789999999999999999999999855 7777766 66777643 22 55788888765 99999
Q ss_pred CCC
Q 013883 429 PTS 431 (434)
Q Consensus 429 pG~ 431 (434)
...
T Consensus 320 ~~~ 322 (356)
T COG0079 320 DCS 322 (356)
T ss_pred eCC
Confidence 875
No 83
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.2e-42 Score=336.91 Aligned_cols=300 Identities=21% Similarity=0.349 Sum_probs=253.8
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
.++|+|+.|.|++++++.+.+++.+++.. ....|++ .|..+||++++++++ ++++++|++|+|+++++..++
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~------~~~~~~I~~t~G~~~~i~~~~ 98 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG------VPAGADVLLGNGSDELIQLLA 98 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC------cCCCCcEEEcCCHHHHHHHHH
Confidence 47899999999999999999999988865 3567887 578999999999986 333237999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
.+++++||+|++++|+|..|...++..|++++.+++++ ++++|++.+++++.. ++++|++++||||||.+++.+++++
T Consensus 99 ~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~-~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~ 177 (356)
T PRK04870 99 LACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTA-DFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVER 177 (356)
T ss_pred HHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999974 689999999999864 8999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~ 346 (434)
|+++| ++++|+||+|.+|.+.. .. ..+ ...+++++++|||| ++++|+|+||+++++++++.++..+ ..++
T Consensus 178 i~~~~---~~~ii~De~y~~~~~~~-~~--~~~-~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~--~~~~ 247 (356)
T PRK04870 178 IIEAA---PGLVVVDEAYQPFAGDS-WL--PRL-ARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVR--PPYN 247 (356)
T ss_pred HHHHC---CCEEEEECCchhhcCcc-hH--HHH-hhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHcc--CCCc
Confidence 99988 77899999999876431 11 112 23468999999999 8999999999999999998887765 3467
Q ss_pred CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCe
Q 013883 347 TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGV 425 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV 425 (434)
.+.+.|.++..+|++ .+++++.+++++++++.+.+.|+++ |+.+.+ .+++|+|+++. ++.++++.| +++||
T Consensus 248 ~~~~~q~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~l-~~~gI 319 (356)
T PRK04870 248 VNVLTQATALFALEH-VDVLDAQAAQLRAERTRLAAALAALPGVTVFP-SAANFILVRVP-----DAAAVFDGL-KTRGV 319 (356)
T ss_pred CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCeEEEEECC-----CHHHHHHHH-HHCCE
Confidence 888999998888886 4567888899999999999999987 887655 45568888763 356777666 56799
Q ss_pred EEECCCCCC
Q 013883 426 VAIPTSVFY 434 (434)
Q Consensus 426 ~v~pG~~F~ 434 (434)
.|.||+.|+
T Consensus 320 ~v~~~~~f~ 328 (356)
T PRK04870 320 LVKNLSGMH 328 (356)
T ss_pred EEEECCCCC
Confidence 999998873
No 84
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-41 Score=336.84 Aligned_cols=301 Identities=20% Similarity=0.267 Sum_probs=255.5
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
..++|+.|.+++++++.+.+++.+.... ...|++. +..+||++++++++ ++++ +|++|+|+++++..++..
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~-~~~Y~~~-~~~~Lr~~ia~~~~------~~~~-~I~it~G~~~~l~~~~~~ 103 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAAAE-IWKYGDP-ENHDLRHALAAHHG------VAPE-NIMVGEGIDGLLGLIVRL 103 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHHH-hhcCCCC-ccHHHHHHHHHHhC------CCHH-HEEEcCCHHHHHHHHHHH
Confidence 4579999999999999999998887643 4568876 47899999999984 6777 899999999999999999
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc-cCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS-KNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
++++||.|++++|+|+.+...+...|++++.+|++. ..+|++.+++.+. .++++|++++||||||.+++.+++++|+
T Consensus 104 ~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~--~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~ 181 (369)
T PRK08153 104 YVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRD--DREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFI 181 (369)
T ss_pred hcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCC--CCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 999999999999999999999999999999999864 3579999987664 5789999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
++|+ ++++||+||+|.++.+++.... +....+++++++||||.+|++|+|+||+++++++++.+.+.+. .++.+
T Consensus 182 ~~~~-~~~~lI~DE~y~~~~~~~~~~~---~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~--~~~~s 255 (369)
T PRK08153 182 EALP-ETTLLVLDEAYCETAPAGAAPP---IDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRN--HFGMN 255 (369)
T ss_pred HhCC-CCcEEEEeCchhhhcCcccchh---hhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhc--CCCCC
Confidence 9887 5999999999999887653322 2223568999999999999999999999999999998887664 47789
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
.+.|.++..+|++ .++++++++.++++++.+.+.|++.|+.+. +.+++|+|+++... .....++.++|++ +||.+.
T Consensus 256 ~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~-p~~~~f~~~~~~~~-~~~a~~l~~~l~~-~Gi~v~ 331 (369)
T PRK08153 256 RIAQAAALAALKD-QAYLAEVVGKIAAARDRIAAIARANGLTPL-PSATNFVAIDCGRD-GAFARAVLDGLIA-RDIFVR 331 (369)
T ss_pred HHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCCccC-CCcCcEEEEECCCC-cccHHHHHHHHHH-CCeEEe
Confidence 9999999999975 578899999999999999999998898765 56777889886421 1246678887765 599995
Q ss_pred -CCC
Q 013883 429 -PTS 431 (434)
Q Consensus 429 -pG~ 431 (434)
||.
T Consensus 332 ~p~~ 335 (369)
T PRK08153 332 MPGV 335 (369)
T ss_pred eCCC
Confidence 653
No 85
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=8.5e-42 Score=339.96 Aligned_cols=317 Identities=20% Similarity=0.254 Sum_probs=250.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc----CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCC--CcEEEcCChHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD----GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPE--KEVTVTSGCTEAI 183 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~--~~i~~t~G~~~ai 183 (434)
+++|.++|.-..+..+.+.+++.+++.+ ....|++..|.++||+++++++.+..+ .++++ ++|++|+|+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~al 82 (388)
T PRK08637 4 TKYNATIGMATEKGGPMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGL 82 (388)
T ss_pred cceecceeeEecCCCcchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHHH
Confidence 6778888843444445677777766654 357899999999999999999876553 23332 2799999999999
Q ss_pred HHHHHHccCCCCeEEEcCCCchhHHHHHH-HcCCEEEEEEcCCCCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccC
Q 013883 184 AATILGLINPGDEVILFAPFYDSYEATLS-MAGAKIKCITLRPPDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKM 258 (434)
Q Consensus 184 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~G~~~~~v~~~~~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~ 258 (434)
.+++.+++++||+|++++|+|+.|...+. ..|++++.||+..+++++|++.++++++ +..+++++++||||||.+
T Consensus 83 ~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~ 162 (388)
T PRK08637 83 SLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYT 162 (388)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCC
Confidence 99999999999999999999999998865 6899999999854467899999999886 445567788999999999
Q ss_pred CCHHHHHHHHHHHHH-----cCcEEEEcCcCCccccCCCCc-cc-cCCCCCCCce--EEEccCChhhccccceeeeEEeC
Q 013883 259 FTREELNVIASLCIE-----NDVLVFSDEVYDKLAFEMDHI-SI-ASLPGMYERT--VTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 259 ~~~e~l~~i~~la~~-----~~~~iI~Deay~~~~~~~~~~-~~-~~~~~~~~~~--i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
++.+++++|+++|++ |+++||+||+|.+|.|++... ++ ..+.+..+++ ++++||||.++++|+|+||++.+
T Consensus 163 ~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 163 PTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred CCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEc
Confidence 999999999999875 899999999999999876432 22 2233334565 45569999999999999999964
Q ss_pred ------hhhHHHHHHH----hhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhC----CCEeec
Q 013883 330 ------PHLTWGVRQA----HSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAV----GFKVFP 393 (434)
Q Consensus 330 ------~~~~~~l~~~----~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~ 393 (434)
+++++.+... .+...++.+.+.|.++..+|++. .+++++++..++++++.+.+.|++. ++.+.+
T Consensus 243 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~ 322 (388)
T PRK08637 243 TKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYP 322 (388)
T ss_pred cccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc
Confidence 5777766532 12234578999999999999874 2345566778999999999888765 588889
Q ss_pred CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 394 SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+++|||+|+++.. . ++.+++++|++++||.+.++
T Consensus 323 ~~~g~~~~~~l~~--~-~~~~l~~~l~~~~gv~~~~~ 356 (388)
T PRK08637 323 FNSGYFMCLKLKG--V-DAEELRVHLLEKYGIGTIAL 356 (388)
T ss_pred ccceEEEEecCCh--H-HHHHHHHHHhhhcceEEEec
Confidence 9999999998842 2 46789999987789988753
No 86
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-41 Score=335.56 Aligned_cols=296 Identities=26% Similarity=0.392 Sum_probs=250.3
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.|+|+.|.|++++++.+.+++.+++.+....|++. |..+||++++++++ ++++ +|++|+|+++++.+++++
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~~-~~~~lr~aia~~~~------~~~~-~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPDP-NADALRQAIAAYYG------LDPE-QVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCCC-cHHHHHHHHHHHhC------CCHH-HEEEcCCHHHHHHHHHHH
Confidence 689999999999889999999988877656778765 66899999999985 6787 899999999999999999
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
++++||+|++++|+|+.|...++..|++++.+++++ ++++|++.+++ .++++++++||||||.+++.+++++|++
T Consensus 97 l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~l~~ 171 (353)
T PRK05387 97 FFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDD-DFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLAEIERILA 171 (353)
T ss_pred hcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCC-CCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999874 68899999874 4678999999999999999999999988
Q ss_pred HHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc-ccCCc
Q 013883 270 LCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL-TFATS 348 (434)
Q Consensus 270 la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~-~~~~~ 348 (434)
.++ ++++|+||+|.+|. +.. ...+....+++++++||||.+|++|+|+||++++++++++++..+... .++.+
T Consensus 172 ~~~--~~~livDe~y~~~~--~~~--~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~~~~ 245 (353)
T PRK05387 172 ANP--DSVVVIDEAYVDFG--GES--AIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSYPLD 245 (353)
T ss_pred hCC--CcEEEEeCcccccC--Ccc--hHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCCCcC
Confidence 653 99999999998753 221 111222357899999999999999999999999999999988776543 46788
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
.+.|.++..+|.+ .+++++.+++++++++.+.+.|++.|+.+.+ .+++|+|+++.. .++.+++++|.+ +||.+.
T Consensus 246 ~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~---~~~~~~~~~l~~-~gi~v~ 319 (353)
T PRK05387 246 RLAQAGAIAAIED-EAYFEETRAKVIATRERLVEELEALGFEVLP-SKANFVFARHPS---HDAAELAAKLRE-RGIIVR 319 (353)
T ss_pred HHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCCeECC-CcCcEEEEECCC---CCHHHHHHHHHH-CCEEEE
Confidence 8999999999976 5678888999999999999999999988754 556688888642 257789988864 599997
Q ss_pred CC
Q 013883 429 PT 430 (434)
Q Consensus 429 pG 430 (434)
+.
T Consensus 320 ~~ 321 (353)
T PRK05387 320 HF 321 (353)
T ss_pred EC
Confidence 53
No 87
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-42 Score=322.12 Aligned_cols=339 Identities=19% Similarity=0.220 Sum_probs=279.2
Q ss_pred cchhhhccCCchHHHHHhhhccccHHHHHHHHhhcCCeeEeCCC-CCCCCCcHHHHHHHHHHHHc-----CCCCCCCCCC
Q 013883 74 SDTIQKTNLQPQQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQG-FPNFDGPDFVKDAAIQAIRD-----GKNQYARGHG 147 (434)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g-~p~~~~~~~v~~~~~~~~~~-----~~~~Y~~~~G 147 (434)
.+++.++.+++.++.+.+.+++++ ++|||++| |-+..+...+.++++++-+. ....|.|+.|
T Consensus 3 ~~i~~~p~DpIlgL~e~f~~D~R~------------~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G 70 (396)
T COG1448 3 EKIEAAPADPILGLKEAFKADPRP------------NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEG 70 (396)
T ss_pred cccccCCCCchhHHHHHHhcCCCc------------CeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCC
Confidence 345666778999999999988765 89999999 66666655566666555332 3568999999
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcE--EEcCChHHHHHHHHHHc--cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEV--TVTSGCTEAIAATILGL--INPGDEVILFAPFYDSYEATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i--~~t~G~~~ai~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 223 (434)
++++++++++++.......++.+ +| +=|.|++.|+......+ ..+..+|++++|+|++|..++...|.++..||+
T Consensus 71 ~~~f~~~~~~llFG~d~~~l~~~-Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Y 149 (396)
T COG1448 71 LPEFLEAVQKLLFGADSPALAED-RVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPY 149 (396)
T ss_pred cHHHHHHHHHHhcCCCcHHHHhh-hHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeec
Confidence 99999999999975444445555 34 33788999999876655 456678999999999999999999999999998
Q ss_pred CC-CCCCCCHHHHHhhccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC--CCcccc
Q 013883 224 RP-PDFAIPIEELKSTISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM--DHISIA 297 (434)
Q Consensus 224 ~~-~~~~~d~~~l~~~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~--~~~~~~ 297 (434)
.+ ++.++|++.+.+.++. +..++++.|.|||||..++.++|++|+++.++++++.++|-||++|.-+. +...++
T Consensus 150 yd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR 229 (396)
T COG1448 150 YDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALR 229 (396)
T ss_pred cccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHH
Confidence 65 6678999999998865 56667788999999999999999999999999999999999999987543 455666
Q ss_pred CCCCCCCceEEEccCChhhccccceeeeEEeC-------hhhHHHHHHHhhccccCCchHHHHHHHHHHhCC---h---H
Q 013883 298 SLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-------PHLTWGVRQAHSFLTFATSTPMQWAATAALRAP---E---T 364 (434)
Q Consensus 298 ~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-------~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~---~---~ 364 (434)
.+......+++..||||+||++|.|+|.+..- .++.++++...+...++++..+..+++.+|+++ . .
T Consensus 230 ~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~ 309 (396)
T COG1448 230 LFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQ 309 (396)
T ss_pred HHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHH
Confidence 66555556899999999999999999987752 345667888888888999999999999999996 2 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhC----CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 365 YYEELKRDYSAKKAILVEGLNAV----GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
.+.+|++++.++|..|++.|++. .|.++..+-|||.+.++ +.+++.+|.+++||+++.+..
T Consensus 310 El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl-------s~~QV~rLree~~IY~v~sGR 374 (396)
T COG1448 310 ELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGL-------SPEQVDRLREEFGIYLVASGR 374 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCC-------CHHHHHHHHHhccEEEecCCe
Confidence 46678999999999999999984 48899999999999876 458889999999999987643
No 88
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-40 Score=331.35 Aligned_cols=312 Identities=25% Similarity=0.385 Sum_probs=263.1
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..+.|+|+.|.+.+++++.+.+++.+++.+. ...|.+..|.++||++++++++ ++++ +|++++|+++++..+
T Consensus 27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~------~~~~-~v~~~~g~t~al~~~ 99 (380)
T PRK06225 27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLG------LDDD-EALITAGATESLYLV 99 (380)
T ss_pred cCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcC------CCCC-cEEEeCCHHHHHHHH
Confidence 4578999999999999999999999888764 4679989999999999999975 5677 899999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC--CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP--PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~--~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
+.+++.+||+|++++|+|..+...++..|++++.++++. .++.+|++.+++.++++++++++++||||||.+++.+++
T Consensus 100 ~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~ 179 (380)
T PRK06225 100 MRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEI 179 (380)
T ss_pred HHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHH
Confidence 999999999999999999999999999999999999753 247899999999999899999999999999999999999
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT 344 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~ 344 (434)
++|+++|++||+++|+||+|.+|..+. .....+ .+++++++.||||.+|++|+|+||+++++++++.++.... ..
T Consensus 180 ~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~-~~ 254 (380)
T PRK06225 180 KEFAEIARDNDAFLLHDCTYRDFAREH--TLAAEY--APEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVI-ND 254 (380)
T ss_pred HHHHHHHHHCCcEEEEehhHHHHhccC--Cchhhc--CCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHh-cc
Confidence 999999999999999999998875432 222222 2478999999999999999999999999999988877643 45
Q ss_pred cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEe-ecCCeeEEEeeecCCCCCCCHHHHHHHHHHh
Q 013883 345 FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKV-FPSSGTYFVVVDHTPFGHETDIAFCEYLIKE 422 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 422 (434)
++.+.+.|.++..+|....++++++++.++++++.+.+.|+++ |+.+ ..+.++.|+|+++.+.+. +..+++++|. +
T Consensus 255 ~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~l~~~l~-~ 332 (380)
T PRK06225 255 LGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGI-DPEDLVEYLL-E 332 (380)
T ss_pred cCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccC-CHHHHHHHHH-H
Confidence 7788899999989898767788888888888899999999874 5432 233455567888754443 5778998887 5
Q ss_pred cCeEEECCCCC
Q 013883 423 VGVVAIPTSVF 433 (434)
Q Consensus 423 ~GV~v~pG~~F 433 (434)
+||.+.||..|
T Consensus 333 ~gi~v~~g~~~ 343 (380)
T PRK06225 333 RKIFVRQGTYT 343 (380)
T ss_pred CCEEEcCCccc
Confidence 69999999754
No 89
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.2e-41 Score=331.69 Aligned_cols=305 Identities=26% Similarity=0.416 Sum_probs=259.5
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
.+.++|+.|.+.+.+++.+.+++.+.... ...|++..+ .+||++++++++ ++++ +|++|+|+++++..++.
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y~~~~~-~~lr~~ia~~~~------~~~~-~i~~t~G~~~~l~~~~~ 102 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADE-LHRYPDGSG-FELKAALAEKFG------VDPE-RIILGNGSDEILELLAR 102 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh-hcCCCCCcH-HHHHHHHHHHhC------cCHH-HEEEcCCHHHHHHHHHH
Confidence 36899999988888888899988887754 567887654 789999999985 5676 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+++++||+|++++|+|..+...+...|++++.++.+ ++++|++.+++++++++++|++++||||||.+++.+++++|+
T Consensus 103 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~ 180 (367)
T PRK02731 103 AYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAK--DYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFL 180 (367)
T ss_pred HhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEeccc--CCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHH
Confidence 999999999999999999998899999999999884 688999999999988999999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCC-ccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDH-ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~ 347 (434)
+.++ +|+++|+||+|.++.+++.. ..+ ......+++++++||||.+|++|+|+||+++++++++.++.... .++.
T Consensus 181 ~~~~-~~~~li~De~y~~~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~--~~~~ 256 (367)
T PRK02731 181 AGVP-PDVLVVLDEAYAEYVRRKDYEDGL-ELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQ--PFNV 256 (367)
T ss_pred HhCC-CCcEEEEECcHHHhccCcCcccHH-HHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccC--CCCC
Confidence 8875 69999999999998876532 222 22223578999999999999999999999999999998887654 4667
Q ss_pred chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEE
Q 013883 348 STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v 427 (434)
+.+.|.++..+|++ .+++++.++.++++++.+.+.|++.|+.+.++ +++|+|+++.. + .++.+++++|.+ +||.+
T Consensus 257 ~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~g~~~~i~~~~-~-~~~~~~~~~L~~-~gI~v 331 (367)
T PRK02731 257 NSLALAAAVAALDD-DAFVEKSRALNAEGMAWLTEFLAELGLEYIPS-VGNFILVDFDD-G-KDAAEAYQALLK-RGVIV 331 (367)
T ss_pred CHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC-CceEEEEECCC-C-CCHHHHHHHHHH-CCEEE
Confidence 88999999999986 66788889999999999999999999887654 46788888732 2 257789888865 59999
Q ss_pred ECCCCC
Q 013883 428 IPTSVF 433 (434)
Q Consensus 428 ~pG~~F 433 (434)
.||..|
T Consensus 332 ~~~~~~ 337 (367)
T PRK02731 332 RPVAGY 337 (367)
T ss_pred EeCCCC
Confidence 999766
No 90
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=324.67 Aligned_cols=295 Identities=21% Similarity=0.329 Sum_probs=244.4
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
.++.+||+.|.+++++++.+++++.+.+.+ ...|++..|..+||++++++++ ++++ +|++|+|+++++..++
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~aia~~~~------~~~~-~I~it~Ga~~al~~~~ 92 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGD-LAAYPSTEDERRARAAVAARHG------RTPD-EVLLLAGAAEGFALLA 92 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhH-hhcCCCccchHHHHHHHHHHhC------cChh-hEEECCCHHHHHHHHH
Confidence 347999999999999999999999888764 4679988899999999999985 6777 8999999999999888
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
+ +++| .++++.|+|..+...++..|++++.+++++ ++++|++.+ +++++++++++||||||.+++.+++.
T Consensus 93 ~--l~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~-~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~~l~-- 162 (349)
T PRK07908 93 R--LRPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDP-PFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAEQLL-- 162 (349)
T ss_pred h--cCCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCc-ccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHHHHH--
Confidence 7 5664 677889999999999999999999999985 488888754 45789999999999999999987654
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~ 347 (434)
++|+ ++.++|+||+|.++.. +...++... ..+++++++||||.+|++|+|+||+++++++++.+..... .+..
T Consensus 163 -~l~~-~~~~iIvDe~y~~~~~-~~~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~--~~~~ 235 (349)
T PRK07908 163 -ALRR-PGRILVVDEAFADAVP-GEPESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRA--HWPV 235 (349)
T ss_pred -HHHh-cCCEEEEECcchhhcc-CCccccccc--cCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCC--CCCc
Confidence 4555 5788999999998854 333344332 3468999999999999999999999999999988877654 3566
Q ss_pred chHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 348 STPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 348 ~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
+.+.+.++..++.. ..+++++++++++++++.+.+.|++.|+.+.++.+++|+|++++. ..++.+.| +++||.
T Consensus 236 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~~~~~~~~~-----~~~~~~~l-~~~gI~ 309 (349)
T PRK07908 236 GTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFVLVRVPD-----AELLRKRL-RERGIA 309 (349)
T ss_pred cHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCceEEEEECCc-----HHHHHHHH-HhCCEE
Confidence 67778777777764 356788899999999999999999889998888899999998742 44555555 667999
Q ss_pred EECCCCC
Q 013883 427 AIPTSVF 433 (434)
Q Consensus 427 v~pG~~F 433 (434)
+.||+.|
T Consensus 310 v~~g~~f 316 (349)
T PRK07908 310 VRRGDTF 316 (349)
T ss_pred EEECCCC
Confidence 9999887
No 91
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-40 Score=320.90 Aligned_cols=290 Identities=23% Similarity=0.359 Sum_probs=237.9
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
.+.|+|+.|.|++++++.+.+++.+++..+. ..|++. |.++||+++++++++.+ ++++ +|++|+|+++++.+++
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~-~i~it~Ga~~~i~~~~ 93 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKN-NVSVGNGADEIIYVMM 93 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcc-eEEEcCCHHHHHHHHH
Confidence 4789999999999999999999988775533 447655 88999999999998643 6677 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
.++ |.|++++|+|+.|...++.+|++++.+|+++ ++.++.+. + .+++++++++||||||.+++.+++++|
T Consensus 94 ~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~~~l~~l 163 (335)
T PRK14808 94 LMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK-DLRIPEVN----V-GEGDVVFIPNPNNPTGHVFEREEIERI 163 (335)
T ss_pred HHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCC-cCCCChhH----c-cCCCEEEEeCCCCCCCCCcCHHHHHHH
Confidence 887 6899999999999999999999999999875 45554332 2 357899999999999999999998888
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~ 347 (434)
+ +++++||+||+|.+|. +.... .+....+++++++||||.+|++|+|+||+++++++++++.+.+ ..++.
T Consensus 164 ~----~~~~~ii~DE~Y~~f~-~~~~~---~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~--~~~~~ 233 (335)
T PRK14808 164 L----KTGAFVALDEAYYEFH-GESYV---DLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVR--LPFNV 233 (335)
T ss_pred H----hcCCEEEEECchhhhc-CCchH---HHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhc--CCCCC
Confidence 6 4899999999999974 21111 1112356899999999999999999999999999999988766 34778
Q ss_pred chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEE
Q 013883 348 STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v 427 (434)
+.+.|.++..+|++ .++.++.++.++++++.+.+.|++.|+.+.+++|+ |+|+.+.. .+..++.++|.+ +||.|
T Consensus 234 ~~~~q~a~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~g~-f~~~~l~~---~~~~~~~~~l~~-~Gi~V 307 (335)
T PRK14808 234 SYVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMGYRITDSRGN-FVFIFMEK---EEKERLLEHLRA-KNIAV 307 (335)
T ss_pred CHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCe-EEEEeCCC---ccHHHHHHHHHH-CCeEE
Confidence 88999999888886 45677777888888999999999999998888777 55777642 245677777654 59999
Q ss_pred EC
Q 013883 428 IP 429 (434)
Q Consensus 428 ~p 429 (434)
.+
T Consensus 308 ~~ 309 (335)
T PRK14808 308 RS 309 (335)
T ss_pred EE
Confidence 85
No 92
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-40 Score=327.19 Aligned_cols=295 Identities=20% Similarity=0.330 Sum_probs=244.3
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.++|+.+.+.+++++.+. ......|++... .+|+++++++++ ++++ +|++|+|+++++.+++.+
T Consensus 29 ~~~~l~~Nenp~~~~~~~~-------~~~~~~Yp~~~~-~~l~~~~a~~~g------~~~~-~I~~~~Gs~e~i~~~~~~ 93 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQLT-------QQTLNRYPECQP-KAVIENYAAYAG------VKPE-QVLVSRGADEGIELLIRA 93 (351)
T ss_pred CceEecCCCCCCCCChhhc-------ccccccCCCCCh-HHHHHHHHHHhC------CCHH-HEEEcCCHHHHHHHHHHH
Confidence 4689999988888776431 123467877653 688888888875 6788 899999999999999999
Q ss_pred ccCCC-CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 190 LINPG-DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 190 l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
++++| |.|++++|+|..|...++..|++++.+|+++ ++++|++.+++++ +++++|++++||||||.+++.+++++|+
T Consensus 94 ~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~-~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~ 171 (351)
T PRK01688 94 FCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD-NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLL 171 (351)
T ss_pred hcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC-CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99997 9999999999999999999999999999975 6899999999988 5899999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
+.|++ +.+||+||+|.+|.... +...+....+++++++||||.||++|+|+||+++++++++.+++... .++.+
T Consensus 172 ~~~~~-~~~vivDEay~~f~~~~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~--~~~v~ 245 (351)
T PRK01688 172 ELTRG-KAIVVADEAYIEFCPQA---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIA--PYPLS 245 (351)
T ss_pred HhCCC-CcEEEEECchhhcCCCC---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccC--CCCCC
Confidence 99876 68899999999986321 22222234579999999999999999999999999999998887653 56788
Q ss_pred hHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 349 TPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 349 ~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
.+.|.++..+|.+. .+++++.++.+.++|+.+.+.|+++ |+..+.+.++.|+|+++. +..+++++|++ +||.
T Consensus 246 ~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~-----~~~~l~~~L~~-~gi~ 319 (351)
T PRK01688 246 TPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT-----ASSAVFKSLWD-QGII 319 (351)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC-----CHHHHHHHHHH-CCeE
Confidence 88888888899864 4678888889999999999999988 664333445567888763 36788888875 5999
Q ss_pred EECCCCC
Q 013883 427 AIPTSVF 433 (434)
Q Consensus 427 v~pG~~F 433 (434)
++++..|
T Consensus 320 vr~~~~~ 326 (351)
T PRK01688 320 LRDQNKQ 326 (351)
T ss_pred EEECCCc
Confidence 9987644
No 93
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=2.6e-40 Score=325.42 Aligned_cols=299 Identities=28% Similarity=0.414 Sum_probs=250.1
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.|+|+.|.|++++++.+.+++.+.+.. ...|+ ..|..+||++++++++ ++++ +|++++|+++++..++..
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y~-~~g~~~lr~~ia~~~~------~~~~-~I~~~~G~~~~l~~~~~~ 93 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG-VNRYP-DMGAVELRAALAEHLG------VPPE-HVAVGCGSVALCQQLVQA 93 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh-cCcCC-CCcHHHHHHHHHHHhC------cCHH-HEEECCCHHHHHHHHHHH
Confidence 6799999999998888999998887653 45675 4699999999999986 6677 899999999999999999
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
++++||+|+++.|+|..|...++..|++++.+++++ ++++|++.++++++++++++++++||||||.+++.+++.++++
T Consensus 94 ~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~ 172 (352)
T PRK03321 94 TAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTP-DHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLD 172 (352)
T ss_pred hcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCC-CCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999875 5789999999999889999999999999999999998888887
Q ss_pred HHHHcCcEEEEcCcCCccccCCCCc-cccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 270 LCIENDVLVFSDEVYDKLAFEMDHI-SIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 270 la~~~~~~iI~Deay~~~~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
.+ +++++||+||+|.++.+++... .+..+ ...+++++++||||.||++|+|+||+++++++++.+++.. ..++.+
T Consensus 173 ~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~--~~~~~s 248 (352)
T PRK03321 173 AV-PADVLVVLDEAYVEYVRDDDVPDGLELV-RDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVA--VPFSVN 248 (352)
T ss_pred hC-CCCeEEEEechHHHhccCcCCCcHHHHH-hhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhc--CCCCCC
Confidence 65 4799999999999998865432 22222 2347899999999999999999999999999999888753 467889
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
.+.|.++..+|...+++.+ ..+++.++++.+.+.|++.|+.+.++ +++|+|+++.. +..+++++| +++||.+.
T Consensus 249 ~~~q~~a~~~l~~~~~~~~-~~~~~~~~r~~~~~~L~~~~~~~~~~-~g~~i~i~l~~----~~~~~~~~l-~~~gI~v~ 321 (352)
T PRK03321 249 SLAQAAAIASLAAEDELLE-RVDAVVAERDRVRAALRAAGWTVPPS-QANFVWLPLGE----RTADFAAAA-AEAGVVVR 321 (352)
T ss_pred HHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHHHHHHHCCCccCCC-CCCEEEEeCCC----CHHHHHHHH-HHCCEEEE
Confidence 9999999999986454544 44455666788999999888876554 56788988732 467888887 45799998
Q ss_pred C
Q 013883 429 P 429 (434)
Q Consensus 429 p 429 (434)
|
T Consensus 322 ~ 322 (352)
T PRK03321 322 P 322 (352)
T ss_pred c
Confidence 7
No 94
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.5e-40 Score=321.04 Aligned_cols=296 Identities=23% Similarity=0.360 Sum_probs=246.5
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
..++|+.|.|++++|+.+.+++.+.+.. ....|++. +..+||++++++++ ++++ +|++|+|+++++..++.
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~~------~~~~-~i~it~G~~~~l~~~~~ 94 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYCS------VVPT-NIFVGNGSDEIIHLIML 94 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHhC------CCcc-cEEEecCHHHHHHHHHH
Confidence 5689999999999999999999887764 34668765 46899999999975 6677 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
+++++||+|++++|+|..+...++..|++++.++.++ ++++|++.+++++++ ++++|++++||||||.+++.+++++|
T Consensus 95 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l 173 (351)
T PRK14807 95 AFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKE-DYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKI 173 (351)
T ss_pred HhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCC-CCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999874 678999999999975 89999999999999999998887666
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~ 347 (434)
+ ++++.++|+||+|.++. +...... ....+++++++||||.+|++|+|+||+++++++++.++..+. .++.
T Consensus 174 ~---~~~~~~~ivDe~y~~~~-~~~~~~~---~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~--~~~~ 244 (351)
T PRK14807 174 I---EKSRGIVVVDEAYFEFY-GNTIVDV---INEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKS--PYNI 244 (351)
T ss_pred H---HhCCCEEEEeCcchhhc-ccchHHH---hhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccC--CCCc
Confidence 5 46678899999998873 3222221 123578999999999999999999999999999998887654 4667
Q ss_pred chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 348 STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
+.+.|.++..+|++ .++++.++.++++++.+.+.|++. |+.+.+++ ++|+|+++. +..++++.|++ +||.
T Consensus 245 ~~~~q~~~~~~l~~--~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~-~~~~~i~~~-----~~~~~~~~l~~-~gV~ 315 (351)
T PRK14807 245 NSLSQVIALKVLRT--GVLKERVNYILNERERLIKELSKIPGIKVYPSK-TNFILVKFK-----DADYVYQGLLE-RGIL 315 (351)
T ss_pred CHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEECcCC-ccEEEEEcC-----CHHHHHHHHHH-CCEE
Confidence 88999999999985 356777778888999999999875 88876554 557888873 36677777765 5999
Q ss_pred EECCCC
Q 013883 427 AIPTSV 432 (434)
Q Consensus 427 v~pG~~ 432 (434)
|.++..
T Consensus 316 v~~~~~ 321 (351)
T PRK14807 316 VRDFSK 321 (351)
T ss_pred EEECCC
Confidence 988653
No 95
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=3.5e-40 Score=323.72 Aligned_cols=301 Identities=27% Similarity=0.480 Sum_probs=257.1
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
++|||++|.+++++++.+.+++.++... ...|++..+ .+||++++++++ ++++ +|++++|+++++..++.+
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y~~~~~-~~lr~~ia~~~~------~~~~-~i~~~~G~~~~l~~~~~~ 90 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADK-LHRYPDPDP-AELKQALADYYG------VDPE-QILLGNGSDEIIELLIRA 90 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHH-hhcCCCCCH-HHHHHHHHHHhC------cChH-HEEEcCCHHHHHHHHHHH
Confidence 6899999998999999999999887643 467888776 899999999987 5677 899999999999999999
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
++++||+|++++|+|+.+...++..|++++.+++++ ++.+|++.+++++++++++|++++||||||.+++.++++++++
T Consensus 91 l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~ 169 (346)
T TIGR01141 91 FLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDE-DGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLE 169 (346)
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCC-CCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999875 4779999999998889999999999999999999999999999
Q ss_pred HHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCch
Q 013883 270 LCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATST 349 (434)
Q Consensus 270 la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~ 349 (434)
.++ +++++|+||+|..+.+.+...... ...+++++++|+||.+|++|+|+||++++++++++++.... .++.+.
T Consensus 170 ~~~-~~~~ii~D~~y~~~~~~~~~~~~~---~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~--~~~~~~ 243 (346)
T TIGR01141 170 RTP-EDALVVVDEAYGEFSGEPSTLPLL---AEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRA--PFNLSR 243 (346)
T ss_pred hCC-CCcEEEEECchhhhcCCccHHHHH---hhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccC--CCCCCH
Confidence 887 799999999999876542221111 12357899999999999899999999999999988876543 467788
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 350 PMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 350 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
+.|.++..+++.. +++++.+++++++++.+++.|+++ |+++.++ +++|+|+++.. ++.+++++|.+ +||.+.
T Consensus 244 ~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~g~~~~~~~~~----~~~~~~~~L~~-~gI~v~ 316 (346)
T TIGR01141 244 LAQAAAIAALRDD-DFIEKTVEEINAERERLYDGLKKLPGLEVYPS-DANFVLIRFPR----DADALFEALLE-KGIIVR 316 (346)
T ss_pred HHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCEECCC-cCCEEEEecCC----CHHHHHHHHHH-CCeEEE
Confidence 9999999999874 478888999999999999999987 8886554 56788888743 47788888865 599999
Q ss_pred CCCCC
Q 013883 429 PTSVF 433 (434)
Q Consensus 429 pG~~F 433 (434)
||+.|
T Consensus 317 ~g~~f 321 (346)
T TIGR01141 317 DLNSY 321 (346)
T ss_pred eCCCc
Confidence 99877
No 96
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.3e-40 Score=320.91 Aligned_cols=286 Identities=18% Similarity=0.271 Sum_probs=227.2
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
..|+|+.+...+... .....|+... ..+||++++++++ ++++ +|++|+|+++++..++.
T Consensus 17 ~~i~l~~Nenp~~~~------------~~~~~Yp~~~-~~~lr~~ia~~~~------~~~~-~I~it~Gs~~~l~~~~~- 75 (332)
T PRK06425 17 RIIDFSANINDFMDI------------GDISIYPEIS-YTDIEDQIKIYTQ------GLKI-KVLIGPGLTHFIYRLLS- 75 (332)
T ss_pred CEEEeccccCCCcCh------------hhcccCcCcC-HHHHHHHHHHHhC------CCcc-eEEECCCHHHHHHHHHH-
Confidence 578999886655311 1235687653 5899999999987 6677 89999999999999987
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
++++| .|++++|+|+.|...++..|++++.+|+++ +++|.+.+++ .++++|++++||||||.+++.+++++|++
T Consensus 76 ~~~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~--~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~ 149 (332)
T PRK06425 76 YINVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNL--INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISE 149 (332)
T ss_pred HhCCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCc--ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHH
Confidence 56776 577779999999999999999999999874 4556665553 37899999999999999999999999999
Q ss_pred HHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCch
Q 013883 270 LCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATST 349 (434)
Q Consensus 270 la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~ 349 (434)
+|+++|++||+||+|.+|.+++ ..+...+....+++++++||||.+|++|+|+||+++++++++.+++... .+..+.
T Consensus 150 ~a~~~~~~iI~DE~Y~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~--~~~~~~ 226 (332)
T PRK06425 150 ICRKKGALLFIDEAFIDFVPNR-AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITE--PWSVCD 226 (332)
T ss_pred HHHHcCCEEEEecchhcccccc-chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCC--CCccCH
Confidence 9999999999999999998754 2233334334579999999999999999999999999999988887543 333444
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 350 PMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 350 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
+.+.++. .. ..+.+++++++.++++|+.+.+.|++.|+.+..+.++.|+|+.++ ++.+++++|++ +||.+.|
T Consensus 227 ~~~~~l~-~~-~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~~~~~~-----~~~~~~~~l~~-~gi~v~~ 298 (332)
T PRK06425 227 PAIDFIR-SI-DLDYVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFITFMIP-----DAHDFYSYLLK-NGILVRL 298 (332)
T ss_pred HHHHHHH-Hh-hhHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEEEEEcC-----CHHHHHHHHHH-CCeEEEE
Confidence 4332221 11 224567788999999999999999999988864445557788763 47789998876 5999999
Q ss_pred CCCC
Q 013883 430 TSVF 433 (434)
Q Consensus 430 G~~F 433 (434)
|+.|
T Consensus 299 ~~~f 302 (332)
T PRK06425 299 LDDY 302 (332)
T ss_pred CCCC
Confidence 9887
No 97
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-39 Score=321.76 Aligned_cols=296 Identities=22% Similarity=0.338 Sum_probs=240.8
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.++|+.+...+++++... .....|++.. ..+||++++++++ ++++ +|++|+|+++++.+++.+
T Consensus 32 ~~~~~~~ne~~~~~~~~~~--------~~~~~Y~~~~-~~~lr~~ia~~~~------~~~~-~I~~t~G~~~~l~~~~~~ 95 (364)
T PRK04781 32 GDVWLNANESAWANPADPD--------ASTRRYPDPQ-PPGLRSALAALYG------CAPE-QLLIGRGSDEAIDLLVRA 95 (364)
T ss_pred CCEEeeCCCCCCCCChhhc--------chhccCCCCC-HHHHHHHHHHHhC------cChH-HEEEeCCHHHHHHHHHHH
Confidence 4577887766666654311 1245688764 6899999999985 6777 899999999999999999
Q ss_pred ccCCC-CeEEEcCCCchhHHHHHHHcCCEEEEEEcCC--CCCCCCHHHHHhhc-ccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 190 LINPG-DEVILFAPFYDSYEATLSMAGAKIKCITLRP--PDFAIPIEELKSTI-SKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 190 l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~--~~~~~d~~~l~~~i-~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
++.+| |.|++++|+|..|...++..|++++.+|+++ +++.+|++.+++.+ ++++++|++++||||||.+++.++++
T Consensus 96 ~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~ 175 (364)
T PRK04781 96 LCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIE 175 (364)
T ss_pred hcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHH
Confidence 99999 7999999999999999999999999999853 34678999886544 66899999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTF 345 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~ 345 (434)
+|++.|+ ++++||+||+|.+|.++. ....+....+++++++||||.||++|+|+||+++++++++.+++.+. .+
T Consensus 176 ~l~~~~~-~~~~iI~Deay~~f~~~~---~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~--~~ 249 (364)
T PRK04781 176 RALQALQ-GKALVVVDEAYGEFSDVP---SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQA--PY 249 (364)
T ss_pred HHHHhCC-CCcEEEEeCcchhhcCCc---chHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccC--CC
Confidence 9999885 589999999999987532 22222234678999999999999999999999999999999988764 56
Q ss_pred CCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhc
Q 013883 346 ATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEV 423 (434)
Q Consensus 346 ~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~ 423 (434)
+.+.+.|.++..+|.+. .++..+.++.++++|+.+.+.|+++ |+....+.+++|+|+++. +..++.++|. ++
T Consensus 250 ~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~-----~~~~~~~~l~-~~ 323 (364)
T PRK04781 250 PVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD-----DAEAAFQALL-AA 323 (364)
T ss_pred CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC-----CHHHHHHHHH-HC
Confidence 78889999999999875 3556666678899999999999988 664334566778999873 3567777775 56
Q ss_pred CeEEECCCCC
Q 013883 424 GVVAIPTSVF 433 (434)
Q Consensus 424 GV~v~pG~~F 433 (434)
||.|.||..|
T Consensus 324 gI~v~~~~~~ 333 (364)
T PRK04781 324 GVVVRDQRAA 333 (364)
T ss_pred CeEEeeCCCC
Confidence 9999999865
No 98
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-40 Score=305.95 Aligned_cols=293 Identities=25% Similarity=0.440 Sum_probs=253.7
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH-HcC
Q 013883 139 KNQYARGHGVPEFNSAIASRFKKDSGL--EVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS-MAG 215 (434)
Q Consensus 139 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~--~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~G 215 (434)
...|.+..|++++|+++|+++.+..|- ..+|+ ++++++|++.++..++..+.+|||..+++.|.|+++..-++ ..|
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~-~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTg 192 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPE-RVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTG 192 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCcc-ceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccC
Confidence 357899999999999999999877654 46888 79999999999999999999999999999999999866554 479
Q ss_pred CEEEEEEcCC-CCCCCCHHHHHhhccc------CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 216 AKIKCITLRP-PDFAIPIEELKSTISK------NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 216 ~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
.++++|.+.. .+++++.+.+|+++.+ +.|.|++.||+||.|.++++|++..++++|.++|+.+|+||+|.+-+
T Consensus 193 veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sV 272 (471)
T KOG0256|consen 193 VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSV 272 (471)
T ss_pred ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence 9999999986 5689999999998854 67899999999999999999999999999999999999999999999
Q ss_pred cCCC-CccccCCCC----CCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCC
Q 013883 289 FEMD-HISIASLPG----MYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAP 362 (434)
Q Consensus 289 ~~~~-~~~~~~~~~----~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~ 362 (434)
|+.. +.++..+.. ..+++.+++|+||.||+||+|+|.++.. ++++...+++.. ....++..|+.++.+|.+.
T Consensus 273 F~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmss--f~~vSs~tQ~~la~LLSD~ 350 (471)
T KOG0256|consen 273 FDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSS--FGLVSSQTQYLLASLLSDE 350 (471)
T ss_pred cCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhh--ccCCcHHHHHHHHHHhchH
Confidence 8863 344433321 4678999999999999999999999985 566666676664 3567888999999999984
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCC----CCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 363 ---ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF----GHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 363 ---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++|+++...|++.+.+++.+.|+++|+++.+.++|+|+|+++.++ ..+...++.++++++.++.++||+.|.
T Consensus 351 ~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~ 429 (471)
T KOG0256|consen 351 EFTREYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCH 429 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcce
Confidence 477889999999999999999999999999999999999997543 333456899999999999999999874
No 99
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.2e-38 Score=314.78 Aligned_cols=296 Identities=31% Similarity=0.476 Sum_probs=246.5
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE-cCChHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV-TSGCTEAIAATIL 188 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~-t~G~~~ai~~~~~ 188 (434)
++|+|+.|.+++++++.+.+++.+.+.. ...|++..+ .+||++++++++ ++++ +|++ ++|+++++..++.
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~~-~~lr~~ia~~~~------~~~~-~i~~~~~Ga~~~i~~~~~ 105 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSK-IHRYPEPDA-PELREALSKYTG------VPVE-NIIVGGDGMDEVIDTLMR 105 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHh-hcCCCCCCH-HHHHHHHHHHhC------CCHH-HEEEeCCCHHHHHHHHHH
Confidence 7899999998898999888888877654 456877655 899999999985 5677 8999 8999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
.++++||.|++++|+|..+...++..|++++.++.++ ++.+|++.+++.++++++++++++||||||.+++.+++++|
T Consensus 106 ~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l- 183 (361)
T PRK00950 106 TFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREE-DFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKI- 183 (361)
T ss_pred HhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCC-CCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHH-
Confidence 9999999999999999999999999999999998653 67899999999998889999999999999999998875554
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
|+++|+++|+||+|.+|. +... ..+....+++++++||||.+|++|+|+||+++++++++.+++... .++.+
T Consensus 184 --~~~~~~~li~De~y~~~~-~~~~---~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~--~~~~~ 255 (361)
T PRK00950 184 --LESTDALVFVDEAYVEFA-EYDY---TPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKT--PFSLT 255 (361)
T ss_pred --HHHCCcEEEEECchhhhC-ccch---HHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcC--CCCCC
Confidence 667899999999999875 2221 122223468999999999999999999999999999988877654 45678
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
.+.|.++..+|.+ .+++++.+++++++++.+.+.|+ +.+. +.+++|+|+++.. .++.+++++|.+ +||.+.
T Consensus 256 ~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~---~~~~-~~~~~~i~~~~~~---~~~~~~~~~l~~-~gv~v~ 326 (361)
T PRK00950 256 RLSQAAAIAALSD-KEYIEKSIEHGIKSREYLYNELP---FKVY-PSEANFVLVDVTP---MTAKEFCEELLK-RGVIVR 326 (361)
T ss_pred HHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhhcC---eeEC-CCcceEEEEECCC---CCHHHHHHHHHH-CCEEEe
Confidence 8899999999986 56788888899999999888886 5554 4566788988732 257889999876 599999
Q ss_pred CCCCC
Q 013883 429 PTSVF 433 (434)
Q Consensus 429 pG~~F 433 (434)
||..|
T Consensus 327 ~~~~f 331 (361)
T PRK00950 327 DCTSF 331 (361)
T ss_pred eCCcc
Confidence 99876
No 100
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1e-38 Score=310.93 Aligned_cols=286 Identities=23% Similarity=0.371 Sum_probs=238.3
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.++|+.|.|.++++ ..+ ...+....|++..+ ++||++++++++ ++++ +|++|+|+++++..+...
T Consensus 18 ~~~~~~~~~~~~~~~--~~~----~~~~~~~~y~~~~~-~~lr~~la~~~~------~~~~-~i~~t~G~~~~i~~~~~~ 83 (330)
T TIGR01140 18 DWLDFSTGINPLGPP--VPP----IPASAWARYPDPEY-DELRAAAAAYYG------LPAA-SVLPVNGAQEAIYLLPRL 83 (330)
T ss_pred heeEccccCCCCCCC--hhh----cchHHHhhCCCccH-HHHHHHHHHHhC------CChh-hEEECCCHHHHHHHHHHH
Confidence 679999998777765 221 11123467888776 999999999875 5677 899999999999997665
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
+.+| .|++++|+|..+...++..|.+++.++ |++.+++.+ ++++++++++||||||.+++.+++++|++
T Consensus 84 -l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~--------d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~ 152 (330)
T TIGR01140 84 -LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP--------DLDRLPAAL-EELDVLVLCNPNNPTGRLIPPETLLALAA 152 (330)
T ss_pred -hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC--------CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 5777 699999999999999999999998886 788999988 46789999999999999999999999999
Q ss_pred HHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCch
Q 013883 270 LCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATST 349 (434)
Q Consensus 270 la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~ 349 (434)
+|++||++||+||+|.++.++. ++..+.+..+++++++||||.+|++|+|+||+++++++++.+..... .++.+.
T Consensus 153 ~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~s~ 227 (330)
T TIGR01140 153 RLRARGGWLVVDEAFIDFTPDA---SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALG--PWTVNG 227 (330)
T ss_pred HhHhcCCEEEEECcccccCCcc---chhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCC--CCCchH
Confidence 9999999999999999887542 22323223578999999999999999999999999999988876653 466788
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC-CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 350 PMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG-FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 350 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
++|.++..+|++ .+|.++.+++++++++.+.+.|++.+ +.+. +.+++|+|+++. +..+++++|++ +||.+.
T Consensus 228 ~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~-----~~~~l~~~l~~-~gi~v~ 299 (330)
T TIGR01140 228 PARAAGRAALAD-TAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTP-----DAAALHEALAR-RGILIR 299 (330)
T ss_pred HHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcC-----CHHHHHHHHHH-CCEEEE
Confidence 899999999986 45778889999999999999999987 5554 456788999864 36789999976 599999
Q ss_pred CCCCC
Q 013883 429 PTSVF 433 (434)
Q Consensus 429 pG~~F 433 (434)
||..|
T Consensus 300 pg~~f 304 (330)
T TIGR01140 300 DFDNF 304 (330)
T ss_pred ECCCC
Confidence 99987
No 101
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-38 Score=311.41 Aligned_cols=285 Identities=22% Similarity=0.339 Sum_probs=235.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
+.|+|+.|.+++++++.+.+++.+++.. ....|++ .|.++||++++++++ ++++ +|++|+|+++++..++.
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~~------~~~~-~I~~t~G~~~~l~~~~~ 90 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFYG------LDAE-NIAVGNGSDELISYLVK 90 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHhC------cCcc-eEEEcCCHHHHHHHHHH
Confidence 6799999999888889999998888754 3567864 699999999999986 6787 89999999999998887
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
.+ +||+|++++|+|..|...++..|++++.++++. ++++|++.+++.+ ++++++++++||||||.+++.+++.+++
T Consensus 91 ~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~i~ 166 (337)
T PRK03967 91 LF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKE-DFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEILKVL 166 (337)
T ss_pred Hh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCC-CCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 76 799999999999999999999999999999874 5889999998875 5788999999999999999988766654
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
++++++|+||+|.+|... . ...+....+++++++||||.||++|+|+||+++++++++++++... .++.+
T Consensus 167 ----~~~~~ii~De~y~~~~~~-~---~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~--~~~~~ 236 (337)
T PRK03967 167 ----ETGKPVVLDEAYAEFSGK-S---LIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKP--PFSLN 236 (337)
T ss_pred ----hcCCEEEEECchhhhccc-c---hHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcC--CCCCC
Confidence 479999999999987521 1 1122223568999999999999999999999999999998887764 45778
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
.+.|.++..+|++ .+++.+.++.+.++|+.+.+.|.+. ..+.+++|+|+++ .+++.|++ +||.|+
T Consensus 237 ~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~~~~~---------~~~~~l~~-~gi~v~ 301 (337)
T PRK03967 237 ILTMKIVRLALDH-YDLIEERIDYIIKERERVRRELGEY----AYPSDANFLLLKL---------DAYDYLLE-NGIVVR 301 (337)
T ss_pred HHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHhccC----cCCCCCcEEEEhH---------HHHHHHHH-CCEEEE
Confidence 9999999999986 4466666667777888888888765 2457788889875 26677765 599998
Q ss_pred CCC
Q 013883 429 PTS 431 (434)
Q Consensus 429 pG~ 431 (434)
++.
T Consensus 302 ~~~ 304 (337)
T PRK03967 302 KLS 304 (337)
T ss_pred eCC
Confidence 764
No 102
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.1e-39 Score=314.80 Aligned_cols=290 Identities=25% Similarity=0.405 Sum_probs=239.7
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.++|+.+++.+++++.+ .. .....|++. +..+||++++++++ ++++ +|++|+|+++++.+++.+
T Consensus 32 ~~~~l~~ne~~~~~~~~~------~~-~~~~~Yp~~-~~~~Lr~aia~~~~------~~~~-~I~it~Gs~~~i~~~~~~ 96 (354)
T PRK04635 32 GDIWINANESPFNNEYKL------DL-ARLNRYPEC-QPPELINAYSAYAG------VAPE-QILTSRGADEAIELLIRA 96 (354)
T ss_pred CcEEeeCCCCCCCCChhh------hh-HHhccCCCC-CHHHHHHHHHHHhC------cCHH-HEEEeCCHHHHHHHHHHH
Confidence 568999999888887643 11 124678876 47999999999875 7788 999999999999999999
Q ss_pred ccCCC-CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 190 LINPG-DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 190 l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
++++| |+|++++|+|..|...++..|++++.+|+++ ++.+|++.++. + +++++|++++||||||.+++.+++++|+
T Consensus 97 ~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~-~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~ 173 (354)
T PRK04635 97 FCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA-DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLI 173 (354)
T ss_pred hcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC-CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHH
Confidence 99999 9999999999999999999999999999974 68899998874 4 6899999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
+.|+ +++||+||+|.+|.... +...+....+++++++||||.+|++|+|+||+++++++++.+.... ..++.+
T Consensus 174 ~~~~--~~~vivDeay~~~~~~~---s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~--~~~~~~ 246 (354)
T PRK04635 174 EMTP--DAIVVVDEAYIEFCPEY---SVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVI--APYPVP 246 (354)
T ss_pred HhCC--CcEEEEeCchHhhccCc---chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhc--CCCCCC
Confidence 8876 49999999999876331 2222333457899999999999999999999999999998887654 356778
Q ss_pred hHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCC-CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 349 TPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVG-FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 349 ~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
.+.|.++..+|.+. .+++++.++.++++|+.+.+.|++++ +.+.+++|+ |+|+++. +..++.+.| +++||.
T Consensus 247 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~-f~~~~~~-----~~~~~~~~l-~~~gv~ 319 (354)
T PRK04635 247 LPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNGN-YVLAKFD-----DVDAVFKAL-WDAGIV 319 (354)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCc-EEEEECC-----CHHHHHHHH-HHCCEE
Confidence 88898999999764 45677788889999999999999985 888877765 6777763 356776655 567999
Q ss_pred EECCC
Q 013883 427 AIPTS 431 (434)
Q Consensus 427 v~pG~ 431 (434)
+++++
T Consensus 320 v~~~~ 324 (354)
T PRK04635 320 ARAYK 324 (354)
T ss_pred EEECC
Confidence 98764
No 103
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=7.6e-38 Score=302.37 Aligned_cols=276 Identities=17% Similarity=0.259 Sum_probs=217.4
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.|+|+.|.+.++ |+.+.+++.+++.. ...|+. ...||++++++++ + +|++|+|+++++..++..
T Consensus 9 ~~i~l~~~~np~~-p~~~~~a~~~~~~~-~~~yp~---~~~l~~~ia~~~~---------~-~I~vt~G~~~al~~~~~~ 73 (311)
T PRK08354 9 GLIDFSASVNPYP-PEWLDEMFERAKEI-SGRYTY---YEWLEEEFSKLFG---------E-PIVITAGITEALYLIGIL 73 (311)
T ss_pred ceeEecCCCCCCC-CHHHHHHHHHHHHH-hhcCCC---hHHHHHHHHHHHC---------C-CEEECCCHHHHHHHHHHh
Confidence 6899999966665 57888888777554 456764 3678999998875 3 799999999999988754
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
+.+||+|++++|+|+.|...++..|++++.+ .+|++.++++++ +++++++++||||||.+++.+++++|++
T Consensus 74 -~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~-------~~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~ 144 (311)
T PRK08354 74 -ALRDRKVIIPRHTYGEYERVARFFAARIIKG-------PNDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLLD 144 (311)
T ss_pred -hCCCCeEEEeCCCcHHHHHHHHHcCCEEeec-------CCCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHHH
Confidence 4589999999999999999999999999765 357888988876 5788999999999999999999999999
Q ss_pred HHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCch
Q 013883 270 LCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATST 349 (434)
Q Consensus 270 la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~ 349 (434)
+|+++|+++|+||+|.+|.+++.. . .++++++++||||.||++|+|+||+++ +.+.++..+. .+..+.
T Consensus 145 ~a~~~~~~li~De~y~~f~~~~~~-----~--~~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~--~~~~~~ 212 (311)
T PRK08354 145 AVEDRNALLILDEAFIDFVKKPES-----P--EGENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRM--PWSIGS 212 (311)
T ss_pred HhhhcCcEEEEeCcchhccccccc-----c--CCCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCC--CccCCH
Confidence 999999999999999999876421 1 157899999999999999999999998 5566665553 345566
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 350 PMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 350 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
+.+.++..++++..+++++.++.++++++.+.+.+ ..+++++|++ +++. ++.++++.|. ++||.+.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l------~~~~~~~~~~-~~~~-----~~~~~~~~l~-~~gv~v~~ 279 (311)
T PRK08354 213 TGYAFLEFLIEDDFEHLRKTMPLIWREKERFEKAL------YVKSDANFFI-KDVG-----DAEKFVEFLK-RNGILVRD 279 (311)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhc------CCCCCCcEEE-EECC-----CHHHHHHHHH-HCCeEEEe
Confidence 66777777776433455555666666665554444 2467788776 4542 4678888875 55999999
Q ss_pred CCCCC
Q 013883 430 TSVFY 434 (434)
Q Consensus 430 G~~F~ 434 (434)
|+.|.
T Consensus 280 g~~f~ 284 (311)
T PRK08354 280 CTSFG 284 (311)
T ss_pred cccCC
Confidence 99873
No 104
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=297.71 Aligned_cols=338 Identities=17% Similarity=0.211 Sum_probs=281.8
Q ss_pred cCCCcchhhhccCCchHHHHHhhhccccHHHHHHHHhhcCCeeEeCCC-CCCCCCcHHHHHHHHHHHHc-----CCCCCC
Q 013883 70 STNQSDTIQKTNLQPQQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQG-FPNFDGPDFVKDAAIQAIRD-----GKNQYA 143 (434)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g-~p~~~~~~~v~~~~~~~~~~-----~~~~Y~ 143 (434)
++-|++++.++.+++.++.+.+++++.+ .+|||+.| |.+..+.|.+++.++++-+. ..-+|.
T Consensus 25 ~s~~s~V~maPpDpILGVTeAfk~D~n~------------~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYl 92 (427)
T KOG1411|consen 25 SSWWSHVEMAPPDPILGVTEAFKKDPNP------------KKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYL 92 (427)
T ss_pred cchhhcCCCCCCCCcccHHHHHhcCCCc------------ceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhc
Confidence 4578889999999999999999987754 89999999 89988888888777776442 346899
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE-----cCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEE
Q 013883 144 RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV-----TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKI 218 (434)
Q Consensus 144 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~-----t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~ 218 (434)
|+.|++|+.+..+++..+.....+..+ +|+. ++|+......++.. .-++..|++++|+|.+|..+++.+|+.+
T Consensus 93 pI~Gl~eF~k~sakLa~G~~s~~ik~~-Ri~tvQ~lSGTGaLriga~Fl~~-f~~~~~I~ip~PTWgNh~~if~~ag~~~ 170 (427)
T KOG1411|consen 93 PITGLAEFNKLSAKLALGDNSPVIKEK-RIVTVQTLSGTGALRVGAEFLAR-FYPSRDIYIPDPTWGNHKNIFKDAGLPV 170 (427)
T ss_pred cccchHHHHHHHHHHhhcCCchhhhcc-ceeEEEeccCcchhhHHHHHHHh-hccccceeecCCcccccCccccccCcce
Confidence 999999999999999887666556555 3443 34433333333333 3458899999999999999999999999
Q ss_pred EEEEcC-CCCCCCCHHHHHhhccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC---
Q 013883 219 KCITLR-PPDFAIPIEELKSTISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM--- 291 (434)
Q Consensus 219 ~~v~~~-~~~~~~d~~~l~~~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~--- 291 (434)
..+.+. +.+.++|++.+.+.+.. +..++++.+.|||||+.++.|+|++|.++.++++++.|+|.+|++|..+.
T Consensus 171 ~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~ 250 (427)
T KOG1411|consen 171 KFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDK 250 (427)
T ss_pred eeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchh
Confidence 988875 46789999998888866 44566778899999999999999999999999999999999999998764
Q ss_pred CCccccCCCCCCCceEEEccCChhhccccceeeeEEe---C----hhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--
Q 013883 292 DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA---P----PHLTWGVRQAHSFLTFATSTPMQWAATAALRAP-- 362 (434)
Q Consensus 292 ~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~---~----~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~-- 362 (434)
+...++.+...+.++++++||+|++|++|.|+|.+.. + .++-++++.+.+.+..++|..+.++++.+|+++
T Consensus 251 DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l 330 (427)
T KOG1411|consen 251 DAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDL 330 (427)
T ss_pred hHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHH
Confidence 4567777877788999999999999999999997743 2 346678888999999999999999999999986
Q ss_pred -hHH---HHHHHHHHHHHHHHHHHHhhhCC----CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 363 -ETY---YEELKRDYSAKKAILVEGLNAVG----FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 363 -~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
.+| ++.|.+++..+|..|.+.|++.| |.++..+.|||+|..+.| +++++|.++++|+++
T Consensus 331 ~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~p-------eQv~~l~ke~~iYmT 397 (427)
T KOG1411|consen 331 KNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNP-------EQVDWLTKEYHIYLT 397 (427)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCH-------HHHHHHHhhheeeec
Confidence 345 45678999999999999998864 788899999999998843 788999999999998
No 105
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.4e-37 Score=303.67 Aligned_cols=278 Identities=21% Similarity=0.270 Sum_probs=224.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-CCCcEEEcCChHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVD-PEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-~~~~i~~t~G~~~ai~~~~~ 188 (434)
+.|+|+.+.+.+++++..... .. ...|+... .+||++++++++ +. ++ +|++|+|+++++.++..
T Consensus 25 ~~i~ls~Nenp~~~~~~~~~~--~~----~~~Yp~~~--~~L~~~ia~~~~------~~~~~-~I~i~~Gs~e~i~~l~~ 89 (339)
T PRK06959 25 AWLDLSTGINPHGYPVPPVPA--DA----WRRLPEDD--DGLAACAARYYG------APDAA-HVLPVAGSQAAIRALPA 89 (339)
T ss_pred hhceeccCCCCCCCCCCCCCH--HH----HHhCCCch--HHHHHHHHHHhC------CCCcc-cEEECcCHHHHHHHHHH
Confidence 468999997666555211111 12 24587653 799999999886 43 46 89999999999997654
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
++++|| |++++|+|+.|...++..|++++.++.++ +.+ .+..+++++++||||||.+++.+++++|+
T Consensus 90 -~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~-------~~~----~~~~~~v~l~nPnNPTG~~~s~~~l~~l~ 156 (339)
T PRK06959 90 -LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA-------DTL----PAALTHLIVVNPNNPTAERLPAARLLRWH 156 (339)
T ss_pred -hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc-------hhc----cccCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 578877 88999999999999999999999887652 222 23457899999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
+.|++++.++|+||+|.+|.+. .++..+. ..+++++++||||.||++|+|+||+++++++++++++.+. .++.+
T Consensus 157 ~~~~~~~~~vI~DEay~~~~~~---~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~--~~~vs 230 (339)
T PRK06959 157 AQLAARGGTLIVDEAFADTLPA---ASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALG--AWTVS 230 (339)
T ss_pred HHHHHcCCEEEEECCCccCCCc---ccchhcc-CCCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcC--CCCCc
Confidence 9999999999999999998643 2333333 2478999999999999999999999999999999988764 56678
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
.+.|.++..+|++ .++.++.++.++++|+.+.+.|+++|+.+. .+++|+|+++. +..++.++|.++ ||.|+
T Consensus 231 ~~~q~a~~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~--~~~~f~~~~~~-----~~~~l~~~l~~~-GI~vr 301 (339)
T PRK06959 231 GPARHAVRAAFAD-AAWQAAMRERLAADGARLAALLRAHGFAVH--ATPLFSWTDDP-----RAAALHAALARR-GIWTR 301 (339)
T ss_pred HHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCCcc--CcceEEEEeCC-----CHHHHHHHHHhC-CeEEE
Confidence 8999999999986 568889999999999999999999998775 35688898763 366888888655 99997
Q ss_pred CC
Q 013883 429 PT 430 (434)
Q Consensus 429 pG 430 (434)
+.
T Consensus 302 ~~ 303 (339)
T PRK06959 302 YF 303 (339)
T ss_pred EC
Confidence 53
No 106
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=2.7e-37 Score=300.93 Aligned_cols=276 Identities=19% Similarity=0.301 Sum_probs=220.3
Q ss_pred CeeEeCCCCCCCCCc-HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGP-DFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~-~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
+.|+|+.|+..++++ +.+.+ .++ ..|+... .+||++++++++ ++ +|++|+|+++++.+++
T Consensus 21 ~~i~l~~ne~p~~~~~~~~~~---~~~----~~yp~~~--~~Lr~~ia~~~~--------~~-~I~it~Gs~~al~~~~- 81 (330)
T PRK05664 21 DWLDLSTGIAPWPWPVPAIPA---DAW----ARLPETD--DGLEAAARAYYG--------AP-QLLPVAGSQAAIQALP- 81 (330)
T ss_pred HheeecCCcCCCCCCCcccCH---HHH----HhCCCCh--HHHHHHHHHHhC--------CC-CEEECcCHHHHHHHHH-
Confidence 569999995444433 22221 222 2476543 899999999986 45 8999999999999875
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
.+.+||+|++++|+|+.|...++..|++++.+|.+ .+++++ ++++++++++||||||.+++.+++++|+
T Consensus 82 -~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~---------~~~~~~-~~~~~v~l~nP~NPTG~~~s~~~l~~l~ 150 (330)
T PRK05664 82 -RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA---------EVEAAL-DSLDVLVVVNPNNPTGRRFDPARLLAWH 150 (330)
T ss_pred -HccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh---------hHhhhh-cCCCEEEEeCCcCCCCCccCHHHHHHHH
Confidence 35899999999999999999999999999998754 344445 3678899999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
++|+++|++||+||+|.++.. ..++..+. ..+++++++||||.+|++|+|+||+++++++++.+..... .++.+
T Consensus 151 ~~~~~~~~~iI~DE~y~~~~~---~~s~~~~~-~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~--~~~~~ 224 (330)
T PRK05664 151 ARLAARGGWLVVDEAFMDNTP---QHSLAACA-HRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLG--PWTVS 224 (330)
T ss_pred HHHHhcCCEEEEECCcccCCC---cccccccc-cCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcC--CCCCC
Confidence 999999999999999987641 23444444 3578999999999999999999999999999998887654 45678
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
.+.|.++..+|.+. ++.+++++.++++++.+.+.|++.|+... +...+|+|+.+. ++.++++.|. ++||.|.
T Consensus 225 ~~~~~~~~~~L~~~-~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~~~~f~~~~~~-----~~~~~~~~l~-~~gi~v~ 296 (330)
T PRK05664 225 GPTRWLAQAALADT-PWQRRQRERLLAASQRLAALLRRHGLTPA-GGCALFQWVRTE-----DAAALHEFLA-RRGILTR 296 (330)
T ss_pred HHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHHHHHCCCccc-CCcceEEEEecC-----CHHHHHHHHH-HCCeEEE
Confidence 89999999999874 56788899999999999999999886432 222367787652 4678888775 5599997
Q ss_pred C
Q 013883 429 P 429 (434)
Q Consensus 429 p 429 (434)
+
T Consensus 297 ~ 297 (330)
T PRK05664 297 L 297 (330)
T ss_pred E
Confidence 5
No 107
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=1.9e-36 Score=304.85 Aligned_cols=308 Identities=19% Similarity=0.186 Sum_probs=245.6
Q ss_pred hcCCeeEeCCCCC--CCCCcH---HHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 107 IKHGAINLGQGFP--NFDGPD---FVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 107 ~~~~~i~l~~g~p--~~~~~~---~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
.+.++|+|.+|.| |+++++ .+.+++.+++..+...|.+..|+++||++++++++ .+ ++++|+|+++
T Consensus 34 ~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~~--------~~-~vv~t~ggt~ 104 (460)
T PRK13238 34 AGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIFG--------YP-YTIPTHQGRA 104 (460)
T ss_pred cCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHhC--------CC-cEEECCCHHH
Confidence 3458999999988 788766 57888888887777889999999999999999997 34 7999999999
Q ss_pred HHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-------CCC--CCCHHHHHhhccc----CCcEEEe
Q 013883 182 AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-------PDF--AIPIEELKSTISK----NTRAILM 248 (434)
Q Consensus 182 ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-------~~~--~~d~~~l~~~i~~----~~~~i~~ 248 (434)
++.+++.++++||| |++++|.|..|...+...|++++.+++++ +++ .+|++.|++++++ ++++|++
T Consensus 105 A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl 183 (460)
T PRK13238 105 AEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVM 183 (460)
T ss_pred HHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEE
Confidence 99999999999999 99999999999999999999999999863 134 4999999999984 6899999
Q ss_pred cCCCCCcc-cCCCHHHHHHHHHHHHHcCcEEEEcCcCC--ccccCC------CCccccCCCCCCCceEEEccCChhhccc
Q 013883 249 NTPHNPTG-KMFTREELNVIASLCIENDVLVFSDEVYD--KLAFEM------DHISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 249 ~~p~NPTG-~~~~~e~l~~i~~la~~~~~~iI~Deay~--~~~~~~------~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
++|+|||| .+++.+++++|.++|++||++||+|+++. ...|.. ...++..+ +..+.|++|.+.++
T Consensus 184 ~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i------~~~~~s~~D~~~~S 257 (460)
T PRK13238 184 TITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI------AREMFSYADGLTMS 257 (460)
T ss_pred ecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH------hhhhcccCcEEEEe
Confidence 99999997 99999999999999999999999999763 233321 11121111 23456777777777
Q ss_pred ccee------eeEEeC-hhhHHHHHHHh----hccccCCchH-HHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHhh
Q 013883 320 GWKI------GWAIAP-PHLTWGVRQAH----SFLTFATSTP-MQWAATAALRA--PETYYEELKRDYSAKKAILVEGLN 385 (434)
Q Consensus 320 G~R~------G~~~~~-~~~~~~l~~~~----~~~~~~~~~~-~q~a~~~~L~~--~~~~~~~~~~~~~~~~~~l~~~L~ 385 (434)
|+|+ |+++++ +++.+.++... .+.+++.... .|.|++..|.+ .+++++.+++ ++++|.+.|+
T Consensus 258 g~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~----~~~~l~~~L~ 333 (460)
T PRK13238 258 AKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIG----QVEYLGEGLE 333 (460)
T ss_pred cccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHH----HHHHHHHHHH
Confidence 7775 366666 57877777663 3345555444 48888877875 3455554433 5799999999
Q ss_pred hCCCEeecCCeeEEEeeecCCCC------CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 386 AVGFKVFPSSGTYFVVVDHTPFG------HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+.|+++..|.|+||+++++..+. .-++.+|+.+|+++.||.+.|++.||
T Consensus 334 ~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~ 388 (460)
T PRK13238 334 EAGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLL 388 (460)
T ss_pred HCCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeeccccee
Confidence 99999999999999999986531 11367899999999999999999886
No 108
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-37 Score=277.04 Aligned_cols=340 Identities=17% Similarity=0.192 Sum_probs=279.0
Q ss_pred CCCcchhhhccCCchHHHHHhhhccccHHHHHHHHhhcCCeeEeCCC-CCCCCCcHHHHHHHHHHHHc------CCCCCC
Q 013883 71 TNQSDTIQKTNLQPQQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQG-FPNFDGPDFVKDAAIQAIRD------GKNQYA 143 (434)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g-~p~~~~~~~v~~~~~~~~~~------~~~~Y~ 143 (434)
+.|.+.+.++....+.+.+++.++.. +.++||++| |.+....||+++.++++-.. .+++|.
T Consensus 4 s~f~~I~~a~p~~vf~~~~~y~~d~~------------p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYL 71 (410)
T KOG1412|consen 4 SFFANIPVAPPIEVFKLNASYGEDLD------------PVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYL 71 (410)
T ss_pred chhcCCccCChHHHHhhHHHhcccCC------------cceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhc
Confidence 35666777777777777777766543 378999999 88889999998888776332 358999
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCCCCCCC----cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcC-CEE
Q 013883 144 RGHGVPEFNSAIASRFKKDSGLEVDPEK----EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAG-AKI 218 (434)
Q Consensus 144 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~----~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G-~~~ 218 (434)
|..|++.++++.++.+.+.....+.+++ +-+.++|+...-.-++..++. ..+|++.+|+|.+|..+++..| ..+
T Consensus 72 pi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf~tv 150 (410)
T KOG1412|consen 72 PILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGFTTV 150 (410)
T ss_pred cccCchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCCcee
Confidence 9999999999999998877777777664 334445544444455555666 4579999999999999999999 567
Q ss_pred EEEEcCC-CCCCCCHHHHHhhccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC---
Q 013883 219 KCITLRP-PDFAIPIEELKSTISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM--- 291 (434)
Q Consensus 219 ~~v~~~~-~~~~~d~~~l~~~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~--- 291 (434)
..+++-+ ++..+|++.+...++. +...|+..|.|||||..++.|+|++|+++.++++++.++|-+|++|+.++
T Consensus 151 ~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~ 230 (410)
T KOG1412|consen 151 ATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDA 230 (410)
T ss_pred eeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccc
Confidence 7788754 6788999999998876 33445567889999999999999999999999999999999999999775
Q ss_pred CCccccCCCCCCCceEEEccCChhhccccceeeeEEe-------ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--
Q 013883 292 DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA-------PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP-- 362 (434)
Q Consensus 292 ~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~-------~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~-- 362 (434)
+.+.++.+...+..+++++||+|+||+++.|+|.+.. .+.+.+++..+.+...++++..+.++++..|+.+
T Consensus 231 DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~l 310 (410)
T KOG1412|consen 231 DAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPEL 310 (410)
T ss_pred cHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHH
Confidence 5677888887778899999999999999999998764 2456678888888888999999999999999986
Q ss_pred -hHH---HHHHHHHHHHHHHHHHHHhhhCC----CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 363 -ETY---YEELKRDYSAKKAILVEGLNAVG----FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 363 -~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
++| ++.+..|++++|..|++.|..++ |+++..|.|||.+.++.+ ..++.|.++++|++.+-
T Consensus 311 re~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp-------~qV~~li~~h~vyLl~~ 379 (410)
T KOG1412|consen 311 REQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTP-------AQVDHLIENHKVYLLSD 379 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCH-------HHHHHHHHhceEEEecC
Confidence 344 55678899999999999998873 899999999999998843 78899999999998763
No 109
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=3.8e-34 Score=280.49 Aligned_cols=317 Identities=36% Similarity=0.575 Sum_probs=263.3
Q ss_pred eEeCCCCCCCCCcHHHHHHHHHH-HHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc
Q 013883 112 INLGQGFPNFDGPDFVKDAAIQA-IRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL 190 (434)
Q Consensus 112 i~l~~g~p~~~~~~~v~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l 190 (434)
+||+.|.+++...+.+.+...+. .......|.+..|..++++.++++++..++....++ ++++++|+++++..++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~~~~~~~t~a~~~~~~~~ 79 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPE-EIVVTNGAQEALSLLLRAL 79 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcc-eEEEecCcHHHHHHHHHHh
Confidence 57888977777777666655542 222446788889999999999999998877655566 8999999999999999999
Q ss_pred cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCH--HHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 191 INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPI--EELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 191 ~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~--~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
.++||+|++++|+|.++...++..|.+++.++.++ ++..+. +.++....+++++|++++|+||||.+++.+++++|+
T Consensus 80 ~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~ 158 (350)
T cd00609 80 LNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDE-EGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELA 158 (350)
T ss_pred CCCCCEEEEcCCCchhHHHHHHHCCCEEEEEeccc-ccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHH
Confidence 99999999999999999999999999999999875 333333 667777778899999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeCh-hhHHHHHHHhhccccCC
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP-HLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~-~~~~~l~~~~~~~~~~~ 347 (434)
++|+++|+++|+|++|.++.+.+............+.+++++|++|.++++|.|+||+++++ ++.+.++.......+++
T Consensus 159 ~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
T cd00609 159 ELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGP 238 (350)
T ss_pred HHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999988765433211223345678999999999998999999999998 89999988887777889
Q ss_pred chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEe-ecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 348 STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKV-FPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
+...+.++..+|+...++.+++++++.++++.+.+.|++.++.. ..+.+++++|+.+... ...+++.++++++||.
T Consensus 239 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~l~~~gi~ 315 (350)
T cd00609 239 STLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG---DDEEFLERLLLEAGVV 315 (350)
T ss_pred ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC---ChHHHHHHHHHhCCEE
Confidence 99999999999998656788889999999999999999986554 5667888999887432 2455666677788999
Q ss_pred EECCCCC
Q 013883 427 AIPTSVF 433 (434)
Q Consensus 427 v~pG~~F 433 (434)
+.++..|
T Consensus 316 i~~~~~~ 322 (350)
T cd00609 316 VRPGSAF 322 (350)
T ss_pred Eeccccc
Confidence 9998766
No 110
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-35 Score=277.53 Aligned_cols=290 Identities=22% Similarity=0.275 Sum_probs=238.2
Q ss_pred CCCCCCCCCcHHHHHHHHHHHH-hhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCE
Q 013883 139 KNQYARGHGVPEFNSAIASRFK-KDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAK 217 (434)
Q Consensus 139 ~~~Y~~~~G~~~lr~~ia~~l~-~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~ 217 (434)
..+|++.+|+++|...+.++.. ..+..... +.+|++|+|.+.+++.+++.++++||.|+++..+|....+.++..|++
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~-~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~ 171 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYK-NWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVK 171 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCC-CceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCce
Confidence 3589999999999999988655 23333333 348999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCCCCCHHHHHhhccc---------CCcEEEec--CCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCc
Q 013883 218 IKCITLRPPDFAIPIEELKSTISK---------NTRAILMN--TPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDK 286 (434)
Q Consensus 218 ~~~v~~~~~~~~~d~~~l~~~i~~---------~~~~i~~~--~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~ 286 (434)
++.|+++ ..++++|.|++.+.. ++ -|+.+ +-+||||..++.|..++|.++|++||++||+||.|..
T Consensus 172 ~ipv~md--~~Gi~pE~l~~il~~w~~~~~k~~~p-~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~ 248 (472)
T KOG0634|consen 172 IIPVKMD--QDGIDPESLEEILSNWKPGSYKKPKP-HVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYF 248 (472)
T ss_pred EEecccc--CCCCCHHHHHHHHhcCCcccccCCCC-eEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccce
Confidence 9888887 578899999987743 23 34444 4499999999999999999999999999999999999
Q ss_pred cccCC---C----C-------------ccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC
Q 013883 287 LAFEM---D----H-------------ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 287 ~~~~~---~----~-------------~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~ 346 (434)
+.++. . . .++.++ +..++||...||||.++ ||.|+||+.+++.+++++-......+.+
T Consensus 249 Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflsl-DtdGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~t~~ 326 (472)
T KOG0634|consen 249 LQMNTYNPSLELESPAHSSSMFLKSLVPSFLSL-DTDGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVATSG 326 (472)
T ss_pred eeccccCCCccccCccccHHHHHHhhcCCcccc-cccccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhcceeecC
Confidence 98762 1 0 111122 23579999999999999 9999999999999998887777777888
Q ss_pred CchHHHHHHHHHHhCC-----hHHHHHHHHHHHHHHHHHHHHhhhC---C-CEeecCCeeEEEeeecCC------CCCCC
Q 013883 347 TSTPMQWAATAALRAP-----ETYYEELKRDYSAKKAILVEGLNAV---G-FKVFPSSGTYFVVVDHTP------FGHET 411 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~---g-~~~~~~~~~~~~~~~~~~------~~~~~ 411 (434)
++...|.++.+.|+.. .+|+.+++..|..|++++..+|.+. + +.+.+|.+|||+|+.++- .....
T Consensus 327 pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q 406 (472)
T KOG0634|consen 327 PSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQ 406 (472)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHH
Confidence 9999999999999873 3789999999999999999999884 4 678899999999999851 12211
Q ss_pred HHHHHHHHHHhcCeEEECCCCCC
Q 013883 412 DIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
-+++....+.+.||.+++|..|.
T Consensus 407 ~~e~i~~~~vk~gV~~v~G~~F~ 429 (472)
T KOG0634|consen 407 IEEIIFIKAVKNGVKLVCGSWFM 429 (472)
T ss_pred HHHHHHHHHHHCCeEEecCceeE
Confidence 34455555567799999999984
No 111
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-34 Score=259.33 Aligned_cols=320 Identities=22% Similarity=0.308 Sum_probs=244.5
Q ss_pred hcCCeeEeCCCCCCCCC--cHHHHHHHHHHHHcC-----CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCCh
Q 013883 107 IKHGAINLGQGFPNFDG--PDFVKDAAIQAIRDG-----KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGC 179 (434)
Q Consensus 107 ~~~~~i~l~~g~p~~~~--~~~v~~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~ 179 (434)
..++.|+|+.|+|..-| ....++...+.+.++ ...|..++|...|.++++..+++.+|+++++. +|.+|+|+
T Consensus 28 rt~g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~-NIalTnGS 106 (417)
T COG3977 28 RTPGAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQ-NIALTNGS 106 (417)
T ss_pred cCCCceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccc-eeeecCCc
Confidence 34579999999986443 334555555665553 46899999999999999999999999999998 89999999
Q ss_pred HHHHHHHHHHccC---CC--CeEEEc-CCCchhHHHHHH------HcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEE
Q 013883 180 TEAIAATILGLIN---PG--DEVILF-APFYDSYEATLS------MAGAKIKCITLRPPDFAIPIEELKSTISKNTRAIL 247 (434)
Q Consensus 180 ~~ai~~~~~~l~~---~g--d~Vlv~-~p~y~~~~~~~~------~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~ 247 (434)
+.+++-++..|.. .| ..|+++ .|.|-+|.++.. .+.-++.-++-..=.+.+|++.+. +.+.+.+|+
T Consensus 107 Qs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~g~ic 184 (417)
T COG3977 107 QSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGESTGAIC 184 (417)
T ss_pred cchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccceeeccCHHHcc--cccccceEE
Confidence 9999988887742 34 346664 789998876421 111112111111013568888886 557889999
Q ss_pred ecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEE
Q 013883 248 MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAI 327 (434)
Q Consensus 248 ~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~ 327 (434)
++-|.||||.+++.|++.+|.++|++||+.+|+|.+|..-.-+-.+.... +-+.+|++.+.|+|| +|+||.|+|.++
T Consensus 185 ~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~--~~w~~NiilC~SLSK-~GLPG~R~GIiI 261 (417)
T COG3977 185 VSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDAT--PLWNENIILCMSLSK-LGLPGSRCGIII 261 (417)
T ss_pred ecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccc--ccCCCCEEEEeehhh-cCCCCcceeEEE
Confidence 99999999999999999999999999999999999998522111111111 235789999999999 699999999999
Q ss_pred eChhhHHHHHHHhhccccCCchHHHHHHHHHHhCCh--HHHHHH-HHHHHHHHH----HHHHHhhhCCCEeecCCeeEEE
Q 013883 328 APPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPE--TYYEEL-KRDYSAKKA----ILVEGLNAVGFKVFPSSGTYFV 400 (434)
Q Consensus 328 ~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~--~~~~~~-~~~~~~~~~----~l~~~L~~~g~~~~~~~~~~~~ 400 (434)
++++++..+..........+..+++++++.+++..+ +.-+++ +.-|+.+.. .+++.|-+..|.+.+++|..|+
T Consensus 262 ane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFl 341 (417)
T COG3977 262 ANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFL 341 (417)
T ss_pred ccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceee
Confidence 999999999998888889999999999999999863 222222 344555544 4444455557888899999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 401 VVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
|+.+...++ ++.++.++|. +.||.|+||+.||
T Consensus 342 WLWf~dLPI-tt~~LYq~LK-a~Gvl~VPG~~FF 373 (417)
T COG3977 342 WLWFKDLPI-TTEELYQRLK-ARGVLMVPGHYFF 373 (417)
T ss_pred hhhhccCCC-CHHHHHHHHH-hCeEEEecccccC
Confidence 998877777 5888998885 5599999999997
No 112
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.6e-33 Score=256.25 Aligned_cols=339 Identities=21% Similarity=0.388 Sum_probs=269.4
Q ss_pred HHHhhhccccHHHHHHHHhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHc---CCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 013883 88 AKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRD---GKNQYARGHGVPEFNSAIASRFKKDSG 164 (434)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g 164 (434)
.+.+.+.|-.+++++..+...+..+|= |. -|..+.+.....+.. ....|+.++|++-+|+.+|+++.+++|
T Consensus 58 pqamgQ~PiTF~RQvlal~~~p~lLd~----~~--fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG 131 (475)
T KOG0258|consen 58 PQAMGQKPITFLRQVLALCQYPELLDS----PE--FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDG 131 (475)
T ss_pred HHHhCCCChhHHHHHHHHhcChhhcCC----CC--CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccC
Confidence 355666677777888777777766542 22 345555555555554 235799999999999999999999999
Q ss_pred CCCCCCCcEEEcCChHHHHHHHHHHcc-CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhccc-
Q 013883 165 LEVDPEKEVTVTSGCTEAIAATILGLI-NPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISK- 241 (434)
Q Consensus 165 ~~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~- 241 (434)
.+.+|+ +|++|+|++.++..++..++ .++|.|++|-|.|+-|...+..+|+..+.+.+++ .+|.+|.++|++.+.+
T Consensus 132 ~p~~p~-dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA 210 (475)
T KOG0258|consen 132 IPADPE-DIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEA 210 (475)
T ss_pred CCCCHH-HeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHH
Confidence 889999 89999999999999998886 5678999999999999999999999999999987 5799999999987754
Q ss_pred ----CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC--CccccC----CCCCC---CceEE
Q 013883 242 ----NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD--HISIAS----LPGMY---ERTVT 308 (434)
Q Consensus 242 ----~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~--~~~~~~----~~~~~---~~~i~ 308 (434)
+++++++.||.||||.+++.|.+++|+.+|.+++++++.||+|++-.|..+ +.++.. +...+ -.++.
T Consensus 211 ~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~S 290 (475)
T KOG0258|consen 211 RKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLAS 290 (475)
T ss_pred hccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEe
Confidence 688999999999999999999999999999999999999999999998763 333322 21111 23567
Q ss_pred EccCChhh-ccccceeeeEEe---ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC-------hH---HHHHHHHHHH
Q 013883 309 MNSLGKTF-SLTGWKIGWAIA---PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP-------ET---YYEELKRDYS 374 (434)
Q Consensus 309 i~S~SK~~-g~~G~R~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~-------~~---~~~~~~~~~~ 374 (434)
+.|.||.+ |-.|.|-||+-. ++++.+++.++.. ...+++..+|..+-...+-+ +. ..+.....++
T Consensus 291 fhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~ 369 (475)
T KOG0258|consen 291 FHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLAS-IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLR 369 (475)
T ss_pred eecccccceeeecccCCeeecccCChhHHHHHHHHHh-hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHH
Confidence 78999998 668999999875 4666666655443 34677888888877777653 11 2334567788
Q ss_pred HHHHHHHHHhhhC-CCEeecCCeeEEEeeecCC----------CCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 375 AKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTP----------FGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 375 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++.+.+.+.++.+ |+.+.+++|.||.|..+.- .+...++-.+.+||+..||.++||++|.
T Consensus 370 ~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFG 440 (475)
T KOG0258|consen 370 SRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFG 440 (475)
T ss_pred HHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCC
Confidence 8888999999987 9999999999999876421 1444667788999999999999999995
No 113
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=100.00 E-value=2.6e-31 Score=264.16 Aligned_cols=305 Identities=19% Similarity=0.176 Sum_probs=233.9
Q ss_pred hcCCeeEeCCCCC--CCCCcH---HHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 107 IKHGAINLGQGFP--NFDGPD---FVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 107 ~~~~~i~l~~g~p--~~~~~~---~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
.+.+.++|..+.+ |+..+. .+.++...++..+...|.+..|+++|+++++++++ .+ ++++++|+++
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd~~Y~~~~g~~~Leeaia~~~g--------~~-~vv~t~~Gt~ 79 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGDEAYAGSKSFYDLEDAVQDLFG--------FK-HIIPTHQGRG 79 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCCCccCCCCCHHHHHHHHHHHHC--------CC-eEEEcCCHHH
Confidence 3458899999988 777664 56666667777777789999999999999999997 34 7999999999
Q ss_pred HHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC---------CCCCCHHHHHhhcccC----CcEEEe
Q 013883 182 AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP---------DFAIPIEELKSTISKN----TRAILM 248 (434)
Q Consensus 182 ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~---------~~~~d~~~l~~~i~~~----~~~i~~ 248 (434)
|+.+++.++++|||+| +++|.|..+...+...|++++.++++++ .+.+|++.|+++++++ +++|++
T Consensus 80 Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v 158 (431)
T cd00617 80 AENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVL 158 (431)
T ss_pred HHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEE
Confidence 9999999999999988 6899999999999999999999999742 2459999999999865 788999
Q ss_pred cCCCCCc-ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCc--cccC-----C-CCccccCCCCCCCceEEEccCChhhccc
Q 013883 249 NTPHNPT-GKMFTREELNVIASLCIENDVLVFSDEVYDK--LAFE-----M-DHISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 249 ~~p~NPT-G~~~~~e~l~~i~~la~~~~~~iI~Deay~~--~~~~-----~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
++|+||+ |.+++.+++++|.++|++||++||+|++... ..+. + ...++. +.++.+.|++|.+.+.
T Consensus 159 ~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~------ei~~e~~s~sd~~~mS 232 (431)
T cd00617 159 TITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA------EIAREMFSYADGCTMS 232 (431)
T ss_pred ECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH------HHHHHhhccCCEEEEE
Confidence 9999998 9999999999999999999999999999432 1121 1 111221 2234577888988888
Q ss_pred cce------eeeEEeCh-hhHHHHHHHh----hccccCCchHHH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 320 GWK------IGWAIAPP-HLTWGVRQAH----SFLTFATSTPMQ-WAATAALRAPETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 320 G~R------~G~~~~~~-~~~~~l~~~~----~~~~~~~~~~~q-~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
|+| .||++++. +++++++... ...+++.-...+ .+++..|++..+ .+.+.++++ +++++.+.|++.
T Consensus 233 ~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~-~~~l~~~~~-~r~~l~~~L~~~ 310 (431)
T cd00617 233 AKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE-EDYLRHRVE-QVRYLGDRLDEA 310 (431)
T ss_pred eecCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc-HHHHHHHHH-HHHHHHHHHHHC
Confidence 888 67999986 5887776422 111222222223 333446655311 233344444 559999999999
Q ss_pred CCEeecCCeeEEEeeecCCCC------CCCHHHHHHHHHHhcCeEEEC
Q 013883 388 GFKVFPSSGTYFVVVDHTPFG------HETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 388 g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Ll~~~GV~v~p 429 (434)
||++..|.|++++|++...+. .-++.+|+.+|+++.||.++-
T Consensus 311 G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~ 358 (431)
T cd00617 311 GVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVE 358 (431)
T ss_pred CCCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEe
Confidence 999999999999999976431 114789999999999999764
No 114
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.97 E-value=2.5e-29 Score=245.28 Aligned_cols=282 Identities=18% Similarity=0.260 Sum_probs=217.6
Q ss_pred CCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCe
Q 013883 117 GFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDE 196 (434)
Q Consensus 117 g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~ 196 (434)
+|.++...|.+.++..+++.. |. |..++.+.+.+.+.+.+|. +++ ++++++|+.+++..++.+++++||.
T Consensus 28 ~ylgl~~~~~~~~~~~~~~~~----~~---g~~~~~~~Le~~lA~~~g~--~~e-~ilv~~gg~~a~~~~~~al~~~gd~ 97 (346)
T TIGR03576 28 DLTGLAGGFKIDEEDLELLET----YV---GPAIFEEKVQELGREHLGG--PEE-KILVFNRTSSAILATILALEPPGRK 97 (346)
T ss_pred ccccCCCChhHHHHHHHHHHH----hc---CCHHHHHHHHHHHHHHcCC--Ccc-eEEEECCHHHHHHHHHHHhCCCCCE
Confidence 466777889999988888765 32 4456666666666655554 566 8999999999999999999999999
Q ss_pred EEEc---CCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHH
Q 013883 197 VILF---APFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE 273 (434)
Q Consensus 197 Vlv~---~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~ 273 (434)
|+++ .|+|..|...++..|++++.+ . |++.++. .+++++|++ +++||+|.+++.+++++|+++|++
T Consensus 98 Vli~~~d~p~~~s~~~~~~l~ga~~~~~--~------~l~~l~~--~~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~ 166 (346)
T TIGR03576 98 VVHYLPEKPAHPSIPRSCKLAGAEYFES--D------ELSELKK--IDGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKS 166 (346)
T ss_pred EEECCCCCCCchhHHHHHHHcCCEEecc--C------CHHHHhh--CcCceEEEE-ECCCCCCcccCHHHHHHHHHHHHH
Confidence 9975 579999999999999986432 1 4555433 246777777 457999999999999999999999
Q ss_pred cCcEEEEcCcCCccccCC-CCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHH
Q 013883 274 NDVLVFSDEVYDKLAFEM-DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQ 352 (434)
Q Consensus 274 ~~~~iI~Deay~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q 352 (434)
+|+++|+||+|..+..+. .......+ +..+++.|||| +++|+|+||+++++++++.+++..+...++.+++.|
T Consensus 167 ~~~~livDEAy~~~~~~~~~~~~~~~~----~~divv~s~SK--alaG~r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~ 240 (346)
T TIGR03576 167 KEAIVLVDDASGARVRRLYGQPPALDL----GADLVVTSTDK--LMDGPRGGLLAGRKELVDKIKSVGEQFGLEAQAPLL 240 (346)
T ss_pred cCCEEEEECCccccccccCCCCCHHHc----CCcEEEeccch--hccccceEEEEeCHHHHHHHHHhhcCcccCccHHHH
Confidence 999999999999865331 11111111 12366779999 568999999999999999999988777777888899
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 353 WAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 353 ~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
.++..+|+... .+.+++.++++++.+.+.+++ +.+.++.++ |+|+++.. .++.+++.++++++||.++||+.
T Consensus 241 ~aa~~aL~~~~--~~~~~~~l~~r~~~~~~~l~~--~~~~~~~~~-f~~~~~~~---~~~~~~~~~ll~~~gV~v~~~~~ 312 (346)
T TIGR03576 241 AAVVRALEEFE--LSRIRDAFKRKEEVYLRLFDK--LNVERTPTG-FVIKGVEE---EKLIEIGLDLLRNYGIITITAVG 312 (346)
T ss_pred HHHHHHHhhcc--HHHHHHHHHHHHHHHHHHHHh--CCCCcCCCe-EEEEeCCC---CCHHHHHHHHHHhCCEEEeCCcc
Confidence 99999997643 356678888888888888874 455555666 68888743 13567888999999999999987
Q ss_pred C
Q 013883 433 F 433 (434)
Q Consensus 433 F 433 (434)
|
T Consensus 313 f 313 (346)
T TIGR03576 313 M 313 (346)
T ss_pred c
Confidence 6
No 115
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=1.2e-29 Score=253.38 Aligned_cols=297 Identities=19% Similarity=0.184 Sum_probs=220.5
Q ss_pred hcCCeeEeCCCC-CCCCCcHHHHHHHHHHHHcCCCCCCCCC---Cc----HHHHHHHHHHHHhhcCCCCCCCCcEEEcCC
Q 013883 107 IKHGAINLGQGF-PNFDGPDFVKDAAIQAIRDGKNQYARGH---GV----PEFNSAIASRFKKDSGLEVDPEKEVTVTSG 178 (434)
Q Consensus 107 ~~~~~i~l~~g~-p~~~~~~~v~~~~~~~~~~~~~~Y~~~~---G~----~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G 178 (434)
.+.++|||+.|. ++++++|.+.+++.+++.+....|++.. |. .+|+++++++++ .+ ++++++|
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~-~~ii~~~ 106 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLG--------TE-DTILYAS 106 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC--------CC-cEEEECc
Confidence 345789999994 6999999999999999877434677666 76 678888888876 24 5677788
Q ss_pred hHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcEEEecCCC
Q 013883 179 CTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRAILMNTPH 252 (434)
Q Consensus 179 ~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~i~~~~p~ 252 (434)
+++++..++.+++++||+|++++|.|+.+...+...+.+.+.++ ..|++.+++++++ ++++|++.+++
T Consensus 107 ~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~ 180 (393)
T TIGR01822 107 CFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA------NNDMADLEAQLKEARAAGARHRLIATDGVF 180 (393)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC------CCCHHHHHHHHHhhhhcCCCceEEEEeCCc
Confidence 89999999999999999999999999999999888888775543 3588999988874 67788888899
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCC-CCCceEEEccCChhhccccceeeeEEeChh
Q 013883 253 NPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPG-MYERTVTMNSLGKTFSLTGWKIGWAIAPPH 331 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~ 331 (434)
||||.+.+ +++|+++|++||+++|+||+|....++..........+ ..+.++++.|+||.++ |+|+||++++++
T Consensus 181 ~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~--g~r~G~~~~~~~ 255 (393)
T TIGR01822 181 SMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG--GASGGFTTARKE 255 (393)
T ss_pred cCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh--CCCcEEEEeCHH
Confidence 99999875 67799999999999999999964333222212111111 1245688999999875 789999999999
Q ss_pred hHHHHHHHhhccccC--CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCC
Q 013883 332 LTWGVRQAHSFLTFA--TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGH 409 (434)
Q Consensus 332 ~~~~l~~~~~~~~~~--~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 409 (434)
+++.++.......++ .+...+.++..+|+.. +..++++++++++++++.+.|++.|+.+.++.+.++. +.+.+ .
T Consensus 256 ~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~-i~~~~--~ 331 (393)
T TIGR01822 256 VVELLRQRSRPYLFSNSLPPAVVGASIKVLEML-EASNELRDRLWANTRYFRERMEAAGFDIKPADHPIIP-VMLYD--A 331 (393)
T ss_pred HHHHHHHhCccceecCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEE-EEeCC--H
Confidence 998887643322222 2334445556666532 2345678899999999999999888887665555443 33221 1
Q ss_pred CCHHHHHHHHHHhcCeEEE
Q 013883 410 ETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 410 ~~~~~~~~~Ll~~~GV~v~ 428 (434)
.+..+++++|+++ ||.+.
T Consensus 332 ~~~~~l~~~L~~~-gI~v~ 349 (393)
T TIGR01822 332 VLAQRFARRLLEE-GIYVT 349 (393)
T ss_pred HHHHHHHHHHHHC-CeeEe
Confidence 1366888888766 99997
No 116
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=2.4e-29 Score=251.41 Aligned_cols=303 Identities=18% Similarity=0.166 Sum_probs=224.4
Q ss_pred hcCCeeEeCCCC-CCCCCcHHHHHHHHHHHHcCCCCCC---CCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 107 IKHGAINLGQGF-PNFDGPDFVKDAAIQAIRDGKNQYA---RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 107 ~~~~~i~l~~g~-p~~~~~~~v~~~~~~~~~~~~~~Y~---~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
.+.+.|||+.|. |++++++.+.+++.+++.+....|. ...|..++++++++++.+.+|. ++ +|++++| +++
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~-~i~~tsG-~~a 114 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---ED-AILYSSC-FDA 114 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---Cc-EEEEcCh-HHH
Confidence 355789999985 7998999999999998876333343 3468889999999999988874 34 7888888 778
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcEEEecCCCCCcc
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRAILMNTPHNPTG 256 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~i~~~~p~NPTG 256 (434)
+..++.+++++||+|++++|+|+.+...+...|++++.++. .|++.+++.+++ ++++|+....+|++|
T Consensus 115 ~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G 188 (397)
T PRK06939 115 NGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDG 188 (397)
T ss_pred HHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCC
Confidence 88899999999999999999999999999999999887764 378888887753 567777767799999
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCc-cccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHI-SIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG 335 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~ 335 (434)
... ++++|+++|++||++||+||+|....++.... ......-..+.+++++||||.++ |+|+||+++++++++.
T Consensus 189 ~~~---~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~~~~~~~ 263 (397)
T PRK06939 189 DIA---PLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGRKEVIDW 263 (397)
T ss_pred CcC---CHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeCHHHHHH
Confidence 854 57889999999999999999996322221111 11111111245699999999995 5699999999999988
Q ss_pred HHHHhhcccc-CC-chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHH
Q 013883 336 VRQAHSFLTF-AT-STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDI 413 (434)
Q Consensus 336 l~~~~~~~~~-~~-~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (434)
+........+ +. +...+.++..+++... ..++++++++++++.+.+.|++.|+++.++.++++.+. +.. + .++.
T Consensus 264 l~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-~~~-~-~~~~ 339 (397)
T PRK06939 264 LRQRSRPYLFSNSLAPAIVAASIKVLELLE-ESDELRDRLWENARYFREGMTAAGFTLGPGEHPIIPVM-LGD-A-KLAQ 339 (397)
T ss_pred HHHhCccccccCCCCHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCCEEEEE-ECC-H-HHHH
Confidence 8765432222 22 2333455555554322 23567889999999999999998888777777766443 211 1 1367
Q ss_pred HHHHHHHHhcCeEEECC
Q 013883 414 AFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 414 ~~~~~Ll~~~GV~v~pG 430 (434)
+++++|+++ ||.+.++
T Consensus 340 ~~~~~L~~~-gI~v~~~ 355 (397)
T PRK06939 340 EFADRLLEE-GVYVIGF 355 (397)
T ss_pred HHHHHHHHC-CceEeee
Confidence 899999877 9999864
No 117
>PLN02822 serine palmitoyltransferase
Probab=99.97 E-value=1.1e-29 Score=257.85 Aligned_cols=307 Identities=16% Similarity=0.203 Sum_probs=232.6
Q ss_pred cCCeeEeCCC-CCCCCCcHHHHHHHHHHHHcCCC-------CCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCCh
Q 013883 108 KHGAINLGQG-FPNFDGPDFVKDAAIQAIRDGKN-------QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGC 179 (434)
Q Consensus 108 ~~~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~~~-------~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~ 179 (434)
+.+.|||+.+ ++++..++.+.+++.+++++... .|.+..+..+|+++++++++ .++ .|++++|.
T Consensus 108 G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~-~i~~s~G~ 179 (481)
T PLN02822 108 GKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPD-SILYSYGL 179 (481)
T ss_pred CceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCC-EEEECCHH
Confidence 4578999987 78999999999999999987322 35555567889999988886 245 79999887
Q ss_pred HHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhc--ccCC-cEEEecCCCCCc
Q 013883 180 TEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTI--SKNT-RAILMNTPHNPT 255 (434)
Q Consensus 180 ~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i--~~~~-~~i~~~~p~NPT 255 (434)
+ ++..++.+++++||.|++....|..+...+...|.+++.++.++ +++..+++.+++.. .+++ ++|+++.++|++
T Consensus 180 ~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~ 258 (481)
T PLN02822 180 S-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNS 258 (481)
T ss_pred H-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCC
Confidence 7 57889999999999999998888888888899999999988763 12222233332222 1234 688888899999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC--CCceEEEccCChhhccccceeeeEEeChhhH
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM--YERTVTMNSLGKTFSLTGWKIGWAIAPPHLT 333 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~ 333 (434)
|.+++ +++|+++|++||+++|+||+|....++.....+....+. .+..+++.||||.+|+.| ||++++++++
T Consensus 259 G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii 332 (481)
T PLN02822 259 GQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARVV 332 (481)
T ss_pred CCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHHH
Confidence 99997 677999999999999999999977776333222221111 245688999999999888 9999999999
Q ss_pred HHHHHHhhccccCCc--hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCC-CC
Q 013883 334 WGVRQAHSFLTFATS--TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPF-GH 409 (434)
Q Consensus 334 ~~l~~~~~~~~~~~~--~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~ 409 (434)
+.++......+++.+ +..+.++..+|+..++ ..+++++++++++++++.|++. |+.+..+.+++++++.+... +.
T Consensus 333 ~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~ 411 (481)
T PLN02822 333 DHQRLSSSGYVFSASLPPYLASAAITAIDVLED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGS 411 (481)
T ss_pred HHHHhcCCceeeccccCHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCccc
Confidence 988866655566654 5567888788865332 2567889999999999999986 88887777888888887432 10
Q ss_pred --CC---HHHHHHHHHHhcCeEEECC
Q 013883 410 --ET---DIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 410 --~~---~~~~~~~Ll~~~GV~v~pG 430 (434)
.+ ..+++++|++++||.+.|+
T Consensus 412 ~~~~~~~~~~~~~~Ll~e~GV~v~~~ 437 (481)
T PLN02822 412 AKEDLSLLEHIADRMLKEDSVLVVVS 437 (481)
T ss_pred ccchHHHHHHHHHHHHhcCCEEEEee
Confidence 01 3578999997779999986
No 118
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=6.1e-29 Score=245.06 Aligned_cols=299 Identities=18% Similarity=0.142 Sum_probs=215.3
Q ss_pred cCCeeEeCCCCC-CCCCcHHHHHHHHHHHHcCCC---CCCCCCCcH----HHHHHHHHHHHhhcCCCCCCCCcEEEcCCh
Q 013883 108 KHGAINLGQGFP-NFDGPDFVKDAAIQAIRDGKN---QYARGHGVP----EFNSAIASRFKKDSGLEVDPEKEVTVTSGC 179 (434)
Q Consensus 108 ~~~~i~l~~g~p-~~~~~~~v~~~~~~~~~~~~~---~Y~~~~G~~----~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~ 179 (434)
+.+.|||+.|.| +++.++.+.+++.+++++... .|....|.. +++++++++++ . ++ +|++++|+
T Consensus 15 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~----~---~~-~i~~~~G~ 86 (360)
T TIGR00858 15 GRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG----T---EA-ALLFSSGY 86 (360)
T ss_pred CceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----C---CC-EEEECchH
Confidence 447899999965 556778999999998875222 222233443 45666666553 1 44 78888885
Q ss_pred HHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc----CCcEEEecCCCCCc
Q 013883 180 TEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK----NTRAILMNTPHNPT 255 (434)
Q Consensus 180 ~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----~~~~i~~~~p~NPT 255 (434)
.+ +..++.+++++||+|++++|+|..+...+...|++++.++. +|++.+++.++. ++++|++.+++|||
T Consensus 87 ~~-~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~ 159 (360)
T TIGR00858 87 LA-NVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH------NDVEHLERLLEKNRGERRKLIVTDGVFSMD 159 (360)
T ss_pred HH-HHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC------CCHHHHHHHHHHcccCCCeEEEEeCCccCC
Confidence 55 44577888999999999999999999999999999987763 478889988864 46788888899999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCC--CCCceEEEccCChhhccccceeeeEEeChhhH
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPG--MYERTVTMNSLGKTFSLTGWKIGWAIAPPHLT 333 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~--~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~ 333 (434)
|...+ +++|.++|+++|+++|+||+|..+.++..........+ ..++++++.||||.+|++| ||++++++++
T Consensus 160 G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~~~~~ 233 (360)
T TIGR00858 160 GDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGSQALI 233 (360)
T ss_pred CCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcCHHHH
Confidence 98774 67799999999999999999987665543222211111 1367899999999999766 9999999988
Q ss_pred HHHHHHhhccc--cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCC
Q 013883 334 WGVRQAHSFLT--FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHET 411 (434)
Q Consensus 334 ~~l~~~~~~~~--~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 411 (434)
+.+........ .+.+...+.++..+|+... ..++++++++++++.+.+.|+++++.+.++.+ .++|+.+.. . .+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~-~-~~ 309 (360)
T TIGR00858 234 DYLINRARTLIFSTALPPAVAAAALAALELIQ-EEPWRREKLLALIARLRAGLEALGFTLMPSCT-PIVPVIIGD-N-AS 309 (360)
T ss_pred HHHHHhCccceecCCCCHHHHHHHHHHHHHHh-hCHHHHHHHHHHHHHHHHHHHHcCCccCCCCC-CEEEEEeCC-H-HH
Confidence 88765443222 2234444555566675422 23567889999999999999998888765544 466776532 1 13
Q ss_pred HHHHHHHHHHhcCeEEECCCC
Q 013883 412 DIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+.+++++|++ +||.+.++..
T Consensus 310 ~~~~~~~l~~-~gI~v~~~~~ 329 (360)
T TIGR00858 310 ALALAEELQQ-QGIFVGAIRP 329 (360)
T ss_pred HHHHHHHHHH-CCeeEeeeCC
Confidence 5688888865 5999987654
No 119
>PRK10534 L-threonine aldolase; Provisional
Probab=99.97 E-value=2.3e-29 Score=245.79 Aligned_cols=292 Identities=19% Similarity=0.191 Sum_probs=207.4
Q ss_pred eEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc
Q 013883 112 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI 191 (434)
Q Consensus 112 i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~ 191 (434)
|||+.+.... ++|.+.+++.++. .+...|.|..+..+|+++++++++ + + .+++++|+++++...+.+++
T Consensus 2 ~~~~~~~~~~-p~~~~~~a~~~~~-~~~~~Y~~~~~~~~L~~~la~~~g------~--~-~~~v~~~g~~a~~~~l~~~~ 70 (333)
T PRK10534 2 IDLRSDTVTR-PSRAMLEAMMAAP-VGDDVYGDDPTVNALQDYAAELSG------K--E-AALFLPTGTQANLVALLSHC 70 (333)
T ss_pred cccccccCCC-CCHHHHHHHHhcc-CCCcccCCCHHHHHHHHHHHHHhC------C--C-eEEEeCchHHHHHHHHHHhc
Confidence 6788875555 7788888876644 345678776678899999999976 2 2 45677777888888888889
Q ss_pred CCCCeEEEcCCCchh-HHHH-HHHcC-CEEEEEEcCCCCCCCCHHHHHhhccc------CCcEEEecCCCCCcccCCCHH
Q 013883 192 NPGDEVILFAPFYDS-YEAT-LSMAG-AKIKCITLRPPDFAIPIEELKSTISK------NTRAILMNTPHNPTGKMFTRE 262 (434)
Q Consensus 192 ~~gd~Vlv~~p~y~~-~~~~-~~~~G-~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~i~~~~p~NPTG~~~~~e 262 (434)
++||+|+++.|.|.. |... ....| ++++.++.++ ++.+|++++++++++ ++++|++++|+ ||.+++.+
T Consensus 71 ~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~ 147 (333)
T PRK10534 71 ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA-DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPRE 147 (333)
T ss_pred CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCC-CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHH
Confidence 999999999888853 3221 23344 6777777763 789999999999976 58899998765 59999999
Q ss_pred HHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceee-eEEeChhhHHHHHHHhh
Q 013883 263 ELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIG-WAIAPPHLTWGVRQAHS 341 (434)
Q Consensus 263 ~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~~~~~~~~~~~l~~~~~ 341 (434)
++++|+++|++|++++|+||+|..............+....++++ .||||.+|++ +| |+++++++++.+++.+.
T Consensus 148 ~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~ 222 (333)
T PRK10534 148 YLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFT--ICLSKGLGTP---VGSLLVGNRDYIKRARRWRK 222 (333)
T ss_pred HHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEE--EEeEcCCCCc---ccceEEcCHHHHHHHHHHHH
Confidence 999999999999999999999873221100111122211123333 4899998854 67 68889999999988776
Q ss_pred ccccC--CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHH
Q 013883 342 FLTFA--TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYL 419 (434)
Q Consensus 342 ~~~~~--~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 419 (434)
....+ .+.+.|.++..+|++. .+. .++..++|+.+.+.|+++|+++.+++ +.|+|+++.. .+..++.+.|
T Consensus 223 ~~~~~~~~~~~~~a~~~~~l~~~---~~~-~~~~~~~r~~l~~~L~~~g~~~~~~~-~nfv~~~~~~---~~~~~~~~~l 294 (333)
T PRK10534 223 MTGGGMRQAGILAAAGLYALKHN---VAR-LQEDHDNAAWLAEQLREAGADVMRQD-TNMLFVRVGE---EQAAALGEYM 294 (333)
T ss_pred HhCCchhhHHHHHHHHHHHHHhh---HHH-HHHHHHHHHHHHHHHHhCCCccCCCC-ceEEEEECCc---hhHHHHHHHH
Confidence 44322 2345577766677542 222 22344567899999999999988875 5578888742 1355665544
Q ss_pred HHhcCeEEECCC
Q 013883 420 IKEVGVVAIPTS 431 (434)
Q Consensus 420 l~~~GV~v~pG~ 431 (434)
.++||.++||.
T Consensus 295 -~~~gi~v~~~~ 305 (333)
T PRK10534 295 -RERNVLINASP 305 (333)
T ss_pred -HHcCeeecCCc
Confidence 56699999985
No 120
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.4e-29 Score=223.55 Aligned_cols=311 Identities=20% Similarity=0.309 Sum_probs=239.7
Q ss_pred hccccHHHHHHHHhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCc
Q 013883 93 KFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKE 172 (434)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~ 172 (434)
.+...+.-+..+.+-+++.+.++..+...-|+|.-.+ -...|+..+. .+++.++++. -++.++ +
T Consensus 25 df~eg~lldane~a~G~~iv~ld~~e~~ryPdP~q~e--------fk~~~~d~rn-k~ls~a~~~d------kpLt~d-n 88 (375)
T KOG0633|consen 25 DFQEGLLLDANEAALGRDIVKLDANENPRYPDPEQME--------FKYVYPDPRN-KRLSDALAQD------KPLTSD-N 88 (375)
T ss_pred hccccceecchhhhcCCCceEeccccCCCCcCHHHcc--------cccccCCccc-chhhhhcccC------CCCCcc-c
Confidence 3444455555666777788888877544444443321 1234555543 4556555443 246777 8
Q ss_pred EEEcCChHHHHHHHHHHccCCC-CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--CCcEEEec
Q 013883 173 VTVTSGCTEAIAATILGLINPG-DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK--NTRAILMN 249 (434)
Q Consensus 173 i~~t~G~~~ai~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~~~i~~~ 249 (434)
|.++-|+.|.|.++++..+.|| ++|++..|+|..|.--+...+++++.+|+.+ +|+++.|.+.+.++. ..|.++++
T Consensus 89 ic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p-dF~lnvdai~evl~~ds~iK~~F~t 167 (375)
T KOG0633|consen 89 ICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP-DFSLNVDAIAEVLELDSKIKCIFLT 167 (375)
T ss_pred eEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC-CccccHHHHHHHHhccccceEEEEc
Confidence 9999999999999999999999 8999999999999888888999999999987 899999999998865 57899999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC
Q 013883 250 TPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 250 ~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
+|+||||..+..+++++|.+.- .|.++++||+|.+|.-.+ +-..+...++|++++++|||.||++|+|+||-..+
T Consensus 168 SPgNPtg~~ik~~di~KiLe~p--~nglVVvDEAYidFsg~~---S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~ 242 (375)
T KOG0633|consen 168 SPGNPTGSIIKEDDILKILEMP--DNGLVVVDEAYIDFSGVE---SRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFP 242 (375)
T ss_pred CCCCCCcccccHHHHHHHHhCC--CCcEEEEeeeeEeecccc---ccchHhHhCCceeehhhhhhhcCcceeEeeccccc
Confidence 9999999999999999988633 289999999999976322 22334456889999999999999999999999999
Q ss_pred hhhHHHHHHHhhccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhC-CCE--eecCCeeEEEeeecC
Q 013883 330 PHLTWGVRQAHSFLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAV-GFK--VFPSSGTYFVVVDHT 405 (434)
Q Consensus 330 ~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~--~~~~~~~~~~~~~~~ 405 (434)
..+++.+...+. +++.+.++..++..+|.+. .+.++..++.+.+.|.++...|.+. ++. +.+..++ |+.+.+.
T Consensus 243 ~~ia~iln~~Ka--PYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daN-FiLi~v~ 319 (375)
T KOG0633|consen 243 LSIAEILNRAKA--PYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDAN-FILIEVT 319 (375)
T ss_pred HHHHHHHHhccC--CccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCccccc-EEEEEEc
Confidence 999988887774 7899999999999999963 4678888999999999999999886 444 2344555 4555553
Q ss_pred CCCCCCHHHHHHHHHHhcCeEEE
Q 013883 406 PFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 406 ~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
..+...+..+..+++.+.||.|+
T Consensus 320 ~~~n~~akkly~q~at~~gVvVR 342 (375)
T KOG0633|consen 320 GGDNGMAKKLYKQDATKMGVVVR 342 (375)
T ss_pred CCCcHHHHHHHHHHHHhcceEEE
Confidence 32222344555566667899886
No 121
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=3.7e-28 Score=241.99 Aligned_cols=300 Identities=18% Similarity=0.191 Sum_probs=225.6
Q ss_pred cCCeeEeCCCC-CCCCCcHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 108 KHGAINLGQGF-PNFDGPDFVKDAAIQAIRDG---KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 108 ~~~~i~l~~g~-p~~~~~~~v~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+++.|||+.|. +++++++.+.+++.+++.+. ...|....|..++++++++++.+..|. ++ .+++++| ++++
T Consensus 32 g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~-~i~~~sG-~~a~ 106 (385)
T TIGR01825 32 GKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EA-ALVFQSG-FNTN 106 (385)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---Cc-EEEECcH-HHHH
Confidence 45789999884 79989999999999888752 235777889999999999999988774 34 6888888 5666
Q ss_pred HHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc----CCcEEEecCCCCCcccCC
Q 013883 184 AATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK----NTRAILMNTPHNPTGKMF 259 (434)
Q Consensus 184 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----~~~~i~~~~p~NPTG~~~ 259 (434)
..++.+++++||.|++++|+|..+...+...|++++.++ .+|++.+++.+++ ++++|++++++||||.+.
T Consensus 107 ~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~ 180 (385)
T TIGR01825 107 QGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVA 180 (385)
T ss_pred HHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCcc
Confidence 678888999999999999999999888888888887653 3577888876653 578888888899999988
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC-ccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHH
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDH-ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQ 338 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~ 338 (434)
+ +++|.++|++||+++|+||+|..+.++... .....+.-..+.++++.||||.+|++| ||+++++++++.+..
T Consensus 181 ~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~~~~~~~ 254 (385)
T TIGR01825 181 P---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKELIEYLKN 254 (385)
T ss_pred C---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHHHHHHHH
Confidence 6 677999999999999999999876654211 111112212567899999999998665 999999999888876
Q ss_pred Hhh-cccc-CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHH
Q 013883 339 AHS-FLTF-ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFC 416 (434)
Q Consensus 339 ~~~-~~~~-~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (434)
... +... ..+.+.+.++.++|+...++ .+..+++.++++++.+.|+++|+++..+++.++.+. +.. ..++.+++
T Consensus 255 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~-~~~--~~~~~~~~ 330 (385)
T TIGR01825 255 RARPFLFSTAQPPAVVAALAAAVDELQRS-PELMERLWDNTRFFKAGLGKLGYDTGGSETPITPVV-IGD--EKAAQEFS 330 (385)
T ss_pred hCccccccCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEE-ECC--HHHHHHHH
Confidence 543 2212 23456677777777643222 245677788899999999999998887777654433 221 11356788
Q ss_pred HHHHHhcCeEEEC
Q 013883 417 EYLIKEVGVVAIP 429 (434)
Q Consensus 417 ~~Ll~~~GV~v~p 429 (434)
++|+++ ||.+.+
T Consensus 331 ~~L~~~-gi~v~~ 342 (385)
T TIGR01825 331 RRLFDE-GIFAQS 342 (385)
T ss_pred HHHHHC-CcEEcc
Confidence 888877 999853
No 122
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=1.6e-27 Score=238.30 Aligned_cols=306 Identities=18% Similarity=0.125 Sum_probs=215.6
Q ss_pred cCCeeEeCCCCCC--CCC-cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFPN--FDG-PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~~-~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|++. +.. +|.+.+++.+++...... ...+..++++++++++.+..+ .+ ++++++|+++|+.
T Consensus 38 g~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~la~~l~~~~~----~~-~v~~~~gg~eA~~ 110 (396)
T PRK02627 38 GKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHT--SNLYYIEPQEELAEKLVELSG----MD-KVFFCNSGAEANE 110 (396)
T ss_pred CCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcccc--ccccCCHHHHHHHHHHHhhcC----CC-EEEECCCcHHHHH
Confidence 3467999888553 333 588999998888753211 112235788889998887654 35 8999999999999
Q ss_pred HHHHHccCCC-------CeEEEcCCCchhHHHHHHHcCCEE-EEEEcCC--CCC----CCCHHHHHhhcccCCcEEEecC
Q 013883 185 ATILGLINPG-------DEVILFAPFYDSYEATLSMAGAKI-KCITLRP--PDF----AIPIEELKSTISKNTRAILMNT 250 (434)
Q Consensus 185 ~~~~~l~~~g-------d~Vlv~~p~y~~~~~~~~~~G~~~-~~v~~~~--~~~----~~d~~~l~~~i~~~~~~i~~~~ 250 (434)
++++.+...+ ++|++.++.|+++.......+... ...+..+ +++ ..|++.+++++.+++++|+++.
T Consensus 111 ~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p 190 (396)
T PRK02627 111 AAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVMLEP 190 (396)
T ss_pred HHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEEec
Confidence 9999765432 679999999998766555443322 1111111 111 2289999999988899999998
Q ss_pred CCCCcc-cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC
Q 013883 251 PHNPTG-KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 251 p~NPTG-~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
++||+| .+++.+.+++|.++|++||+++|+||+|.+|.+.+....+..+...++ +.+|||.++ +|+|+||++++
T Consensus 191 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd----i~t~sK~~~-~G~rig~~~~~ 265 (396)
T PRK02627 191 IQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD----IMTLAKGLG-GGVPIGAVLAK 265 (396)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC----EEEEcchhh-CCcccEEEEEc
Confidence 899999 688999999999999999999999999999876654333222221222 447999999 99999999999
Q ss_pred hhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCC-EeecCCeeEEEeeecCC
Q 013883 330 PHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGF-KVFPSSGTYFVVVDHTP 406 (434)
Q Consensus 330 ~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~ 406 (434)
+++++.+.......+++.+.+.|.++.++|+.. +++.++.++.....++.+.+.+.+.++ ..... .|.++|+.+.
T Consensus 266 ~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~i~~~- 343 (396)
T PRK02627 266 EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRG-LGLMIGIELD- 343 (396)
T ss_pred HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeecc-CcEEEEEEec-
Confidence 998887765555567889999999999998753 223344444434444444444433332 22233 4567777762
Q ss_pred CCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 407 FGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 407 ~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
.+..+++++|+++ ||.+.|+.
T Consensus 344 ---~~~~~~~~~l~~~-Gv~v~~~~ 364 (396)
T PRK02627 344 ---RPAAEIVKKALEK-GLLINVTG 364 (396)
T ss_pred ---CcHHHHHHHHHHC-CeEEeecC
Confidence 1477899999876 99999975
No 123
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.96 E-value=7.7e-27 Score=232.31 Aligned_cols=302 Identities=18% Similarity=0.136 Sum_probs=214.8
Q ss_pred hcCCeeEeCCCC-CCCCCcHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 107 IKHGAINLGQGF-PNFDGPDFVKDAAIQAIRDG---KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 107 ~~~~~i~l~~g~-p~~~~~~~v~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
.+.+.|||+.|. +++.+++.+.+++.+++... ...|....|..++++.+.+.+.+.++. ++ .|++++| +++
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~---~~-~i~~~~g-~~~ 111 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA---ER-ALLFSSG-YAA 111 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC---Cc-EEEECcH-HHH
Confidence 345789999884 46667888999999988752 122334445555566666666655552 33 5666555 566
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccC---CcEEEecCCCCCcccCC
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKN---TRAILMNTPHNPTGKMF 259 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~---~~~i~~~~p~NPTG~~~ 259 (434)
+..++..++++||.|++++|.|+.+...+...|++++.++.. |++.+++.+++. ++++++.+++||||...
T Consensus 112 ~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~ 185 (385)
T PRK05958 112 NLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPHN------DVDALEALLAKWRAGRALIVTESVFSMDGDLA 185 (385)
T ss_pred HHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCCC------CHHHHHHHHHhccCCCeEEEEEecccCCCCcC
Confidence 666778889999999999999999999999999999888653 788999888652 45556667899999876
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCcc-c--cCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHH
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHIS-I--ASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV 336 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~-~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l 336 (434)
+ +++|+++|++||+++|+||+|..+.++..... . ..+. ..++++++.|+||.+|.+| ||+++++++.+.+
T Consensus 186 ~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~ 258 (385)
T PRK05958 186 P---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLA-GEPDVILVGTLGKALGSSG---AAVLGSETLIDYL 258 (385)
T ss_pred C---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCC-CCCceEEEEechhhcccCC---cEEEcCHHHHHHH
Confidence 4 77799999999999999999976554422111 1 1222 2457899999999998766 9999999888877
Q ss_pred HHHhhccc--cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHH
Q 013883 337 RQAHSFLT--FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIA 414 (434)
Q Consensus 337 ~~~~~~~~--~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (434)
........ .+.+...+.++.++|+..++. +++.+++.++++.+.+.|+++|+++.++.++++ ++.++. ..++.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~--~~~~~~ 334 (385)
T PRK05958 259 INRARPFIFTTALPPAQAAAARAALRILRRE-PERRERLAALIARLRAGLRALGFQLMDSQSAIQ-PLIVGD--NERALA 334 (385)
T ss_pred HHhCccceecCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCCCEE-EEEeCC--HHHHHH
Confidence 54432222 233444445555667643222 456788999999999999998888877777754 555432 124567
Q ss_pred HHHHHHHhcCeEEECCC
Q 013883 415 FCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 415 ~~~~Ll~~~GV~v~pG~ 431 (434)
+.++|.+ +||.+.++.
T Consensus 335 ~~~~l~~-~gI~v~~~~ 350 (385)
T PRK05958 335 LAAALQE-QGFWVGAIR 350 (385)
T ss_pred HHHHHHH-CCceEeccc
Confidence 8888865 599999754
No 124
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=3.4e-27 Score=236.78 Aligned_cols=297 Identities=21% Similarity=0.189 Sum_probs=211.0
Q ss_pred CeeEeCCC-CCCCCCcHHHHHHHHHHHHcCCC-------CCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQG-FPNFDGPDFVKDAAIQAIRDGKN-------QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~~~-------~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
..++|+.. |.++.++|.+++++.+++..... .|.......+|++.++++++ . ++ .|++++| ++
T Consensus 47 ~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g------~-~~-~i~~~sG-~~ 117 (410)
T PRK13392 47 RVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG------K-ES-ALLFTSG-YV 117 (410)
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC------C-CC-EEEECcH-HH
Confidence 46777765 88899999999999998865321 12221124567777777765 1 34 6888887 56
Q ss_pred HHHHHHHHcc--CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc----ccCCcEEEecCCCCCc
Q 013883 182 AIAATILGLI--NPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI----SKNTRAILMNTPHNPT 255 (434)
Q Consensus 182 ai~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i----~~~~~~i~~~~p~NPT 255 (434)
++..++..+. .+||.|++..+.|..+...+...|+++..++.+ |.+.+++.+ .+++++|++++|+|||
T Consensus 118 a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~t 191 (410)
T PRK13392 118 SNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN------DLADLEEQLASVDPDRPKLIAFESVYSMD 191 (410)
T ss_pred HHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC------CHHHHHHHHHhccCCCCEEEEEeCCCCCC
Confidence 6766776664 488988888778888878888899988776532 344444444 2478999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCc-eEEEccCChhhccccceeeeEEeChhhHH
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYER-TVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~-~i~i~S~SK~~g~~G~R~G~~~~~~~~~~ 334 (434)
|.+++ +++|.++|++||+++|+||+|....++.....+....+..++ .++++||||.||++| ||+++++++++
T Consensus 192 G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~~~~ 265 (410)
T PRK13392 192 GDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASADLID 265 (410)
T ss_pred ccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCHHHHH
Confidence 99986 667888999999999999999954444332222221122223 378899999999888 99999999999
Q ss_pred HHHHHhhcc--ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCH
Q 013883 335 GVRQAHSFL--TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETD 412 (434)
Q Consensus 335 ~l~~~~~~~--~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (434)
.+++..... +.+.+++.+.++.++|+..+. ....+++++++++.+++.|++.|+++.+++++++. +.+.. . ...
T Consensus 266 ~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~-i~~~~-~-~~~ 341 (410)
T PRK13392 266 FVRSFAPGFIFTTALPPAVAAGATAAIRHLKT-SQTERDAHQDRVAALKAKLNANGIPVMPSPSHIVP-VMVGD-P-TLC 341 (410)
T ss_pred HHHHhCcchhccCcCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEE-EEeCC-H-HHH
Confidence 888766432 233455678888888875332 34456788999999999999999988888887652 22211 1 124
Q ss_pred HHHHHHHHHhcCeEEECCC
Q 013883 413 IAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 413 ~~~~~~Ll~~~GV~v~pG~ 431 (434)
.+++++|++++||.+.|+.
T Consensus 342 ~~~~~~L~~~~GI~v~~~~ 360 (410)
T PRK13392 342 KAISDRLMSEHGIYIQPIN 360 (410)
T ss_pred HHHHHHHHHhCCEEEeeeC
Confidence 5788888877799999853
No 125
>PLN02721 threonine aldolase
Probab=99.96 E-value=2.7e-27 Score=232.87 Aligned_cols=300 Identities=19% Similarity=0.192 Sum_probs=203.2
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHH-HHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQA-IRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
.+++|+.+.+.. +++.+.+++.+. .......|.|. ..+|+++++++++. + .+++++++++++..++.
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~--~~~l~~~la~~~~~--------~-~~~~~~~Gs~a~~~~l~ 73 (353)
T PLN02721 6 RVVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGYDPT--ALRLEEEMAKIFGK--------E-AALFVPSGTMGNLISVL 73 (353)
T ss_pred hhhhhhcccccC-CCHHHHHHHHhccCCCcccCCCHH--HHHHHHHHHHHhCC--------c-eeEEecCccHHHHHHHH
Confidence 467899998886 566777777654 22223344443 68999999999872 2 24444444666667777
Q ss_pred HccC-CCCeEEEcCCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc-------cCCcEEEecC-CCCCcc
Q 013883 189 GLIN-PGDEVILFAPFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTIS-------KNTRAILMNT-PHNPTG 256 (434)
Q Consensus 189 ~l~~-~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-------~~~~~i~~~~-p~NPTG 256 (434)
.+++ +||+|++++|+|..... .+...|++++.+|.++ ++.+|+|.++++++ +++++|++++ ++||||
T Consensus 74 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G 152 (353)
T PLN02721 74 VHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNE-DGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGG 152 (353)
T ss_pred HHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCCc-CCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCC
Confidence 7777 99999999999865444 5678899999998764 67899999999997 5789999976 588999
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeee-EEeChhhHHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGW-AIAPPHLTWG 335 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~-~~~~~~~~~~ 335 (434)
.+++.+++++|+++|++||+++|+|++|..............+....+ .++.|+||.++. ++|+ +++++++++.
T Consensus 153 ~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~---~~G~~~~~~~~~~~~ 227 (353)
T PLN02721 153 RCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAAD--SVSVCLSKGLGA---PVGSVIVGSKSFIRK 227 (353)
T ss_pred ccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCC--EEEEecccccCC---ceeeEEecCHHHHHh
Confidence 999999999999999999999999999853221100111111111122 445579999873 3565 6788999888
Q ss_pred HHHHhhccccCCchHHHHH--HHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEe--ecCCeeEEEeeecCCCCCC
Q 013883 336 VRQAHSFLTFATSTPMQWA--ATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKV--FPSSGTYFVVVDHTPFGHE 410 (434)
Q Consensus 336 l~~~~~~~~~~~~~~~q~a--~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~~~~~~~~~~~~~~~~~~ 410 (434)
+...+.....+.....+.+ +...++ ++++.++ +..++++.+.+.|+++ ++.+ .+++++ ++|+++......
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~-~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 302 (353)
T PLN02721 228 AKRLRKTLGGGMRQVGVLAAAALVALQ---ENVPKLE-DDHKKAKLLAEGLNQIKGLRVNVAAVETN-IVYFDITDGSRI 302 (353)
T ss_pred HHHHHHhcCCCeehhHHHHHHHHHHHH---HHHHHHH-HHHHHHHHHHHHHHhCCCcEEecCCccce-EEEEEccCCccc
Confidence 7766653332232232222 223333 2344433 3356678899999887 6754 345555 578876431112
Q ss_pred CHHHHHHHHHHhcCeEEECCCCC
Q 013883 411 TDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 411 ~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+..+++++|. ++||.+.|+..+
T Consensus 303 ~~~~~~~~L~-~~gi~v~~~~~~ 324 (353)
T PLN02721 303 TAEKLCKSLE-EHGVLLMPGNSS 324 (353)
T ss_pred cHHHHHHHHH-hCCcEEecCCCc
Confidence 4678888886 569999998644
No 126
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=5.4e-27 Score=229.33 Aligned_cols=289 Identities=15% Similarity=0.095 Sum_probs=204.2
Q ss_pred CCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEc
Q 013883 121 FDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILF 200 (434)
Q Consensus 121 ~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~ 200 (434)
+++++.+++++.++... ...|.+..+..++++.++++++ ++ ++++++|+++++..++.+++++||+|+++
T Consensus 8 ~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~~a~~~g--------~~-~~~~~~~gt~a~~~~~~~l~~~gd~v~~~ 77 (338)
T cd06502 8 TGPTPEMLEAMAAANVG-DDVYGEDPTTAKLEARAAELFG--------KE-AALFVPSGTAANQLALAAHTQPGGSVICH 77 (338)
T ss_pred CCCCHHHHHHHHhcccC-CcccCCCHHHHHHHHHHHHHhC--------CC-eEEEecCchHHHHHHHHHhcCCCCeEEEe
Confidence 56778888888776533 2356555556677777777664 34 57777777899999999999999999999
Q ss_pred CCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-------CCcEEEecCCCCCcccCCCHHHHHHHHHH
Q 013883 201 APFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK-------NTRAILMNTPHNPTGKMFTREELNVIASL 270 (434)
Q Consensus 201 ~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-------~~~~i~~~~p~NPTG~~~~~e~l~~i~~l 270 (434)
+|+|..+.. .....|++++.++.+ ++.+|++.+++++++ ++++|++++|+|| |.+++.+++++|+++
T Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~ 154 (338)
T cd06502 78 ETAHIYTDEAGAPEFLSGVKLLPVPGE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISAL 154 (338)
T ss_pred cCcceeeecCCcHHHHcCceEEeecCC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHH
Confidence 999876442 345689999999875 467999999999975 6899999999998 666799999999999
Q ss_pred HHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhc--cccCCc
Q 013883 271 CIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSF--LTFATS 348 (434)
Q Consensus 271 a~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~--~~~~~~ 348 (434)
|++||+++|+||+|..+........+..+.. +..+++.|+||.+|++| .++++++++++++++..... .+++.+
T Consensus 155 ~~~~~~~livDea~~~~~~~~~~~~~~~~~~--~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd06502 155 AKENGLPLHLDGARLANAAAALGVALKTYKS--GVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQAGGGMRQS 230 (338)
T ss_pred HHHcCCeEeechHHHHHHHHhcCCCHHHHHh--cCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHhCCChhhH
Confidence 9999999999999864432111112222211 12256779999999887 33456788998888776533 234456
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHH--hcCeE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIK--EVGVV 426 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~--~~GV~ 426 (434)
.+.+.++..+|+.. .+ .+..+++.++++++.+.|+++|+.+.++.+++++ +.+.. +......+.+++.+ ++||.
T Consensus 231 ~~~~~a~~~~L~~~-~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-v~~~~-~~~~~~~l~~~l~~~~~~gi~ 306 (338)
T cd06502 231 GFLAAAGLAALEND-LW-LRRLRHDHEMARRLAEALEELGGLESEVQTNIVL-LDPVE-ANAVFVELSKEAIERRGEGVL 306 (338)
T ss_pred HHHHHHHHHHhcCc-hH-HHHHHHHHHHHHHHHHHHHhcCCCcccccCCeEE-EecCC-ccHHHHHHHHHHHHhhhCCEE
Confidence 67778888888753 33 3455777788899999999998877777777654 33321 11111223333321 46999
Q ss_pred EECC
Q 013883 427 AIPT 430 (434)
Q Consensus 427 v~pG 430 (434)
+.+.
T Consensus 307 ~~~~ 310 (338)
T cd06502 307 FYAW 310 (338)
T ss_pred EEec
Confidence 8775
No 127
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.96 E-value=2.3e-26 Score=225.84 Aligned_cols=300 Identities=17% Similarity=0.190 Sum_probs=211.9
Q ss_pred CeeEeCCC-CCCCCCcHHHHHHHHHHHHcCCCC---CCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 110 GAINLGQG-FPNFDGPDFVKDAAIQAIRDGKNQ---YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 110 ~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~~~~---Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
.+++|+.. +.+.+.++.+.+++++++++.... |....|..++++++.+.+.+.+|. ++ .|++ +++++++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~-~iv~-~sg~~a~~~ 76 (349)
T cd06454 2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK---EA-ALVF-SSGYAANDG 76 (349)
T ss_pred CceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC---CC-EEEe-ccHHHHHHH
Confidence 45677665 778887899999999998763222 222334444555555555544443 23 4554 555778888
Q ss_pred HHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-----CCcEEEecCCCCCcccCCC
Q 013883 186 TILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-----NTRAILMNTPHNPTGKMFT 260 (434)
Q Consensus 186 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-----~~~~i~~~~p~NPTG~~~~ 260 (434)
++.+++++||.|++++|.|+.+...+...|++++.++. +|.+.+++++++ +++++++++|+||||...+
T Consensus 77 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 77 VLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred HHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 88888999999999999999999889999999987753 367778887764 4677788899999998874
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCC-CCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHH
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLP-GMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA 339 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~ 339 (434)
+++|+++|+++|+++|+|++|....++........+. ...+.++++.|++|.++.+| ||++.++++.+.+...
T Consensus 151 ---~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~~~ 224 (349)
T cd06454 151 ---LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSKELIDYLRSY 224 (349)
T ss_pred ---HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCHHHHHHHHHh
Confidence 6778999999999999999997533322111111111 22356799999999998655 9999999888877654
Q ss_pred hhcc--ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHH
Q 013883 340 HSFL--TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCE 417 (434)
Q Consensus 340 ~~~~--~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (434)
.... ....+...+.++...|+...+ .+..++++.++++.+.+.|.+.|+.+..+.++++.++.+.+ + .++.++++
T Consensus 225 ~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~-~-~~~~~~~~ 301 (349)
T cd06454 225 ARGFIFSTSLPPAVAAAALAALEVLQG-GPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDD-P-AKAVAFSD 301 (349)
T ss_pred chhhhccCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCC-h-HHHHHHHH
Confidence 3322 224455566667777765333 45678899999999999999989887766555554443321 1 24678888
Q ss_pred HHHHhcCeEEECC
Q 013883 418 YLIKEVGVVAIPT 430 (434)
Q Consensus 418 ~Ll~~~GV~v~pG 430 (434)
.|+++ ||.+.++
T Consensus 302 ~L~~~-gI~~~~~ 313 (349)
T cd06454 302 ALLER-GIYVQAI 313 (349)
T ss_pred HHHhC-CceEEEe
Confidence 88776 9999875
No 128
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=2.1e-26 Score=234.39 Aligned_cols=296 Identities=16% Similarity=0.205 Sum_probs=208.5
Q ss_pred CCeeEeCCC-CCCCCC-cHHHHHHHHHHHHcCC-------CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCCh
Q 013883 109 HGAINLGQG-FPNFDG-PDFVKDAAIQAIRDGK-------NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGC 179 (434)
Q Consensus 109 ~~~i~l~~g-~p~~~~-~~~v~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~ 179 (434)
...+||+.. |.++.. ++...+++.+++++-. ..|+...++.+|++++|++++. ++ .|++++|
T Consensus 100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~-------~~-ai~~~~G- 170 (489)
T PLN02483 100 RRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK-------PA-AIVFGMG- 170 (489)
T ss_pred ceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC-------Cc-EEEECCH-
Confidence 367999875 888874 4556666666665421 2366666788999999999872 44 6777776
Q ss_pred HHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc-------cCC-----cEEE
Q 013883 180 TEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS-------KNT-----RAIL 247 (434)
Q Consensus 180 ~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-------~~~-----~~i~ 247 (434)
..++..++.+++++||.|++++|.|..+...++..|++++.++.+ |++.+++.++ +++ ++++
T Consensus 171 ~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~li 244 (489)
T PLN02483 171 YATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIV 244 (489)
T ss_pred HHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC------CHHHHHHHHHhhhhccccccccCCceEEE
Confidence 555557788899999999999999999999999999999999865 3455555443 222 5555
Q ss_pred ecC-CCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccc---cCCCCCCCceEEEccCChhhcccccee
Q 013883 248 MNT-PHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISI---ASLPGMYERTVTMNSLGKTFSLTGWKI 323 (434)
Q Consensus 248 ~~~-p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~g~~G~R~ 323 (434)
++. ..|++|.+. ++++|+++|++||++||+||+|....++...... ..+. ..+.+++++||||.+|+.|
T Consensus 245 vve~v~s~~G~~~---~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~-~~~~dI~~~SfSKs~g~~G--- 317 (489)
T PLN02483 245 IVEGIYSMEGELC---KLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVD-PADVDIMMGTFTKSFGSCG--- 317 (489)
T ss_pred EECCCCCCCCccc---CHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCC-cccCcEEEEecchhcccCc---
Confidence 544 579999887 5777999999999999999999854443222211 1221 2356799999999999777
Q ss_pred eeEEeChhhHHHHHHHhhccccC--CchHHHHHHHHHHh-----CChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCe
Q 013883 324 GWAIAPPHLTWGVRQAHSFLTFA--TSTPMQWAATAALR-----APETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSG 396 (434)
Q Consensus 324 G~~~~~~~~~~~l~~~~~~~~~~--~~~~~q~a~~~~L~-----~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 396 (434)
||+++++++++.++.......++ .+++...++.++|+ +..+...+++++++++++++++.|+++|+.+..+.+
T Consensus 318 G~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~ 397 (489)
T PLN02483 318 GYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGDND 397 (489)
T ss_pred eEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCCCC
Confidence 99999999999988764322222 23333323444443 223445666889999999999999999998876655
Q ss_pred eEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 397 TYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
++++++.+... .+..+++++|+++ ||.+.|
T Consensus 398 sp~~~l~l~~~--~~~~~~~~~Ll~~-GI~v~~ 427 (489)
T PLN02483 398 SPVMPIMLYNP--AKIPAFSRECLKQ-NVAVVV 427 (489)
T ss_pred CCEEEEEECCH--HHHHHHHHHHHHC-CcEEee
Confidence 55555443211 1345788888865 999996
No 129
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=2.5e-26 Score=229.83 Aligned_cols=300 Identities=18% Similarity=0.211 Sum_probs=216.0
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC-----CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcC-ChHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYAR-----GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTS-GCTEAI 183 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~-----~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~-G~~~ai 183 (434)
++++|+.|.|++++|+.+.++..++ .....|.+ ..|.+++++++++++.+.+|.+. + ++++++ |++++.
T Consensus 21 ~~~~l~~g~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~--~-~v~~~~~g~~~~~ 95 (398)
T cd00613 21 SMSFLGSGTYKHNPPAVIKRNILEN--EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDV--A-NASLQDEATAAAE 95 (398)
T ss_pred CcccccccccCCcCcHHHHHHhccc--cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCc--c-ceeccCchHHHHH
Confidence 4589999999999999988877666 33345666 68999999999999999988643 3 455555 555565
Q ss_pred HHHHHHccCC--CCeEEEcCCCchhHHHHHHHcC----CEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCccc
Q 013883 184 AATILGLINP--GDEVILFAPFYDSYEATLSMAG----AKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGK 257 (434)
Q Consensus 184 ~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~G----~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~ 257 (434)
..++.+++.+ ||+|++++|.|+.+...+...| ++++.+++++ ++.+|++.+++++++++++|++++|+ |||.
T Consensus 96 ~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~ 173 (398)
T cd00613 96 AAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE-GGTVDLEALKEEVSEEVAALMVQYPN-TLGV 173 (398)
T ss_pred HHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC-CCCcCHHHHHHhcCCCeEEEEEECCC-CCce
Confidence 5556666666 9999999999999998888887 8999998864 56789999999999999999999885 8999
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccc----cceeeeEEeChhhH
Q 013883 258 MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT----GWKIGWAIAPPHLT 333 (434)
Q Consensus 258 ~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~~~~~~~~~ 333 (434)
+. +.+++|+++|++||+++|+|+++........ .+..+..+++.|++|.+ ++ |+|+||++.+++++
T Consensus 174 ~~--~~l~~i~~la~~~g~~livD~~~~~~~~~~~-------~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~ 243 (398)
T cd00613 174 FE--DLIKEIADIAHSAGALVYVDGDNLNLTGLKP-------PGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKELV 243 (398)
T ss_pred ec--chHHHHHHHHHhcCCEEEEEeccccccCCCC-------hHHcCCCEEEeeccccC-CCCCCCCCceeEEEEhhhhH
Confidence 84 3579999999999999999998754321100 11123568999999998 45 89999999998877
Q ss_pred HHHHHH-----------------------------hhccccCCch-HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 013883 334 WGVRQA-----------------------------HSFLTFATST-PMQWAATAALRAPETYYEELKRDYSAKKAILVEG 383 (434)
Q Consensus 334 ~~l~~~-----------------------------~~~~~~~~~~-~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~ 383 (434)
+.+... .....++.+. ..+.++..++...++.+++++++++++++++++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~ 323 (398)
T cd00613 244 RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKR 323 (398)
T ss_pred hhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 654110 0001122222 2333433334334567788899999999999999
Q ss_pred hhhCCCEeecCCeeEE--EeeecCCC-CCCCHHHHHHHHHHhcCeEEEC
Q 013883 384 LNAVGFKVFPSSGTYF--VVVDHTPF-GHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 384 L~~~g~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
|++++... .+.+.++ +++++... + .+..+++++|+++ ||.+..
T Consensus 324 L~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~~~~~~~~L~~~-gi~~~~ 369 (398)
T cd00613 324 LKEVGGVL-PFNGPFFHEFVLRLPPLYG-IRAEDLAKALIDG-GFHAPT 369 (398)
T ss_pred HHhcCCcc-cCCCCeeEEEEEEcCCcch-HHHHHHHHhhhhc-Cccccc
Confidence 99886543 2333333 45555321 1 2467888888765 887643
No 130
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=1.1e-25 Score=225.49 Aligned_cols=300 Identities=18% Similarity=0.190 Sum_probs=212.7
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC---------CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYAR---------GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~---------~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
+.+.|..+.-+ +.+..+.+++.+.+.+....... ...+.++|+.++++++ .. +++ +|++++|++
T Consensus 19 ~~~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g----~~-~~~-~i~~~~~~t 91 (401)
T PRK10874 19 AGVYLDSAATA-LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLN----AP-DAK-NIVWTRGTT 91 (401)
T ss_pred ceEEEeCCccc-CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcC----CC-CCC-EEEEECCHH
Confidence 46778776544 35567888888777642111100 0114466777777665 21 566 899999999
Q ss_pred HHHHHHHHHc----cCCCCeEEEcCCCchh----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCC
Q 013883 181 EAIAATILGL----INPGDEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPH 252 (434)
Q Consensus 181 ~ai~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~ 252 (434)
+++.+++.++ +++||+|++.+|.|++ +...++..|++++.++.+. ++.+|++.+++++++++++|++++|+
T Consensus 92 ~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~~t~lv~i~~~~ 170 (401)
T PRK10874 92 ESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA-DRLPDVDLLPELITPRTRILALGQMS 170 (401)
T ss_pred HHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC-CCcCCHHHHHHhcCcCcEEEEEeCCc
Confidence 9999999987 4799999999999865 4556678899999999874 67889999999999999999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhh
Q 013883 253 NPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL 332 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~ 332 (434)
||||..++ +++|+++|+++|+++|+|++|....+. ..+.. .+..+++.|++|.+|.+| +||+++++++
T Consensus 171 n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~---~~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~~~~~ 238 (401)
T PRK10874 171 NVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFP---ADVQA----LDIDFYAFSGHKLYGPTG--IGVLYGKSEL 238 (401)
T ss_pred ccccCcCC---HHHHHHHHHHcCCEEEEECCccccccc---CCchh----cCCCEEEEecccccCCCc--cEEEEEchHH
Confidence 99999986 567888999999999999999643221 12211 134577899999888667 7999999988
Q ss_pred HHHHHHHh---------------------hccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhC-CC
Q 013883 333 TWGVRQAH---------------------SFLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAV-GF 389 (434)
Q Consensus 333 ~~~l~~~~---------------------~~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 389 (434)
++.+.... ++...+++...+.++..+++.. +...+..+++.++.++++.+.|+++ |+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~ 318 (401)
T PRK10874 239 LEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGF 318 (401)
T ss_pred HhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 77654221 1112244555666666666532 1123445677778889999999886 88
Q ss_pred EeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 390 KVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
.+..+..+.++++.+.. . +..++.+.| +++||.+.+|..|
T Consensus 319 ~~~~~~~~~i~~~~~~~--~-~~~~~~~~L-~~~gI~v~~g~~~ 358 (401)
T PRK10874 319 RSFRCQDSSLLAFDFAG--V-HHSDLVTLL-AEYGIALRAGQHC 358 (401)
T ss_pred EEeCCCCCcEEEEEECC--c-CHHHHHHHH-HHCCcEEeccccc
Confidence 87754444455555532 2 456777766 4569999998743
No 131
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.95 E-value=1.9e-26 Score=229.18 Aligned_cols=299 Identities=19% Similarity=0.207 Sum_probs=209.4
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCC---CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGK---NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
...|||..|.. .++ .++.+.+++.+++.+.. ..|. .+.++.+++.+.+.+|. + ++++++|++++
T Consensus 27 ~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~-----~~~~~~l~~~la~~~g~----~-~~~~~~sg~~a 96 (379)
T TIGR00707 27 KEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYY-----TEPQEELAEKLVEHSGA----D-RVFFCNSGAEA 96 (379)
T ss_pred CEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccC-----CHHHHHHHHHHHhhCCC----C-EEEEeCCcHHH
Confidence 36799988632 222 45889999988887632 2232 24455555555555543 4 79999999999
Q ss_pred HHHHHHHc---cC----CCCeEEEcCCCchhHHHHHHHcCCEEEE----EEcCCCCCCC----CHHHHHhhcccCCcEEE
Q 013883 183 IAATILGL---IN----PGDEVILFAPFYDSYEATLSMAGAKIKC----ITLRPPDFAI----PIEELKSTISKNTRAIL 247 (434)
Q Consensus 183 i~~~~~~l---~~----~gd~Vlv~~p~y~~~~~~~~~~G~~~~~----v~~~~~~~~~----d~~~l~~~i~~~~~~i~ 247 (434)
+..+++.+ .. +||+|++++|+|+++.......+..... .++.. ++.. |++.+++.+++++++|+
T Consensus 97 ~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~l~~~~~~~~~~v~ 175 (379)
T TIGR00707 97 NEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVP-GFSYAPYNDIESLKKAIDDETAAVI 175 (379)
T ss_pred HHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCC-CceeeCCCCHHHHHHHhhhCeeEEE
Confidence 99888755 22 3799999999999887776666554321 22221 2211 89999999988899999
Q ss_pred ecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeE
Q 013883 248 MNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWA 326 (434)
Q Consensus 248 ~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~ 326 (434)
++.++||+|.. ++.+++++|.++|+++|+++|+||+|.+|.+.+........ +..+++ .+|||.++ +|+|+||+
T Consensus 176 ~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~-~~~~d~---~t~sK~~~-~G~riG~~ 250 (379)
T TIGR00707 176 VEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHY-GIEPDI---ITLAKGLG-GGVPIGAT 250 (379)
T ss_pred EEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhc-CCCCCE---EEEccccc-CCcccEEE
Confidence 97667778864 68999999999999999999999999987665432222222 122232 37899999 99999999
Q ss_pred EeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----CCEeecCCeeEEEee
Q 013883 327 IAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----GFKVFPSSGTYFVVV 402 (434)
Q Consensus 327 ~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~ 402 (434)
++++++++.+........++.+.+.|.++.++|+..++ .+.+++++++++.+++.|++. ++...++ .+.++|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~g~~~~~ 327 (379)
T TIGR00707 251 LAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEK--ERLLENVKEKGDYFKERLEELGKNYPNKEVRG-KGLMLGI 327 (379)
T ss_pred EEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHhhCCCCcccc-CceEEEE
Confidence 99999998887655556778889999999988874221 234566677777777766654 3322223 4556666
Q ss_pred ecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 403 DHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 403 ~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
.+.+ +..+++++|.+ .||.+.|+.
T Consensus 328 ~~~~----~~~~~~~~l~~-~Gv~v~~~~ 351 (379)
T TIGR00707 328 ELEA----PCKDIVKKALE-KGLLVNCAG 351 (379)
T ss_pred EecC----cHHHHHHHHHH-CCcEEeeCC
Confidence 6532 35678888755 599999964
No 132
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.95 E-value=4e-26 Score=227.56 Aligned_cols=301 Identities=18% Similarity=0.174 Sum_probs=207.0
Q ss_pred CCeeEeCCCC----CCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 109 HGAINLGQGF----PNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 109 ~~~i~l~~g~----p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
...+||..|. -++ .+|.+.+++.+++.+..+. ... ...+...++++.+.+..+ .+ ++++++|+++|+.
T Consensus 31 ~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~-~~~-~~~~~~~~la~~l~~~~~----~~-~v~~~~sGseA~~ 102 (389)
T PRK01278 31 ERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWHV-SNL-YRIPEQERLAERLVENSF----AD-KVFFTNSGAEAVE 102 (389)
T ss_pred CEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCcc-ccc-cCChHHHHHHHHHHhhCC----CC-EEEEcCCcHHHHH
Confidence 3578887752 233 4788899999988753221 111 122344556666654332 34 7999999999999
Q ss_pred HHHHHc----cCCCC----eEEEcCCCchhHHHHHHHcCCEEEEEEc-C--CCCCC----CCHHHHHhhcccCCcEEEec
Q 013883 185 ATILGL----INPGD----EVILFAPFYDSYEATLSMAGAKIKCITL-R--PPDFA----IPIEELKSTISKNTRAILMN 249 (434)
Q Consensus 185 ~~~~~l----~~~gd----~Vlv~~p~y~~~~~~~~~~G~~~~~v~~-~--~~~~~----~d~~~l~~~i~~~~~~i~~~ 249 (434)
.+++.+ .++|| +|++.++.|+++.......+......+. . .+++. .|++.+++++++++++|+++
T Consensus 103 ~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avive 182 (389)
T PRK01278 103 CAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIE 182 (389)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEe
Confidence 998876 45666 8999999999987776665544322211 1 11222 58999999998889999998
Q ss_pred CCCCCcc-cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEe
Q 013883 250 TPHNPTG-KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 328 (434)
Q Consensus 250 ~p~NPTG-~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~ 328 (434)
.++||+| .+++.+.+++|.++|++||+++|+||+|.++.+.+.......+.-.+| +.+|||.++ +|+|+||+++
T Consensus 183 p~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~t~sK~l~-~G~~ig~~~~ 257 (389)
T PRK01278 183 PIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD----IMAVAKGIG-GGFPLGACLA 257 (389)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC----EEEEehhcc-CCcceEEEEE
Confidence 8899999 788999999999999999999999999998876654322222211122 458999999 9999999999
Q ss_pred ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--h---HHHHHHHHHHHHHHHHHHHHhhhCC--CEeecCCeeEEEe
Q 013883 329 PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--E---TYYEELKRDYSAKKAILVEGLNAVG--FKVFPSSGTYFVV 401 (434)
Q Consensus 329 ~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~---~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~~~~~~ 401 (434)
++++++.+.......+++.+++.|.++.++|+.. + ++++++.++++++.+.+. ++.. +..+.+ .|++++
T Consensus 258 ~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~---~~~~~~~~~v~g-~G~~~~ 333 (389)
T PRK01278 258 TEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLV---DRFPDVIEEVRG-KGLLLG 333 (389)
T ss_pred cHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH---hhCCCceeeEec-ccEEEE
Confidence 9999888776666678889999999998888642 1 222333333333333322 2222 222334 455666
Q ss_pred eecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 402 VDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 402 ~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.+.. ++.+++++|+++ ||.+.||.
T Consensus 334 i~~~~----~~~~~~~~l~~~-GV~~~p~~ 358 (389)
T PRK01278 334 LKCVV----PNRDLVQALRDE-GLLTVGAG 358 (389)
T ss_pred EEEec----CHHHHHHHHHHC-CeEEeecC
Confidence 66532 477899999877 99999974
No 133
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.95 E-value=6.6e-26 Score=227.04 Aligned_cols=300 Identities=20% Similarity=0.171 Sum_probs=213.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc-------CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD-------GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~-------~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
..++|..|... .++.+++++.+.+.. +...|....+..++++.+.+++.+.+|.+ .. .|++++ ++++
T Consensus 20 ~~~~~~~~~~~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~-~v~~~s-gt~a 93 (402)
T cd00378 20 ETLELIASENF--TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YA-NVQPHS-GSQA 93 (402)
T ss_pred hCeeeeccCCc--CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ce-eeecCC-cHHH
Confidence 57888655322 266777777655421 12335555667788887777787777754 33 566665 5799
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHH-----HHHcCCEEEEEEcCCC--CCCCCHHHHHhhcc-cCCcEEEecCCCCC
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEAT-----LSMAGAKIKCITLRPP--DFAIPIEELKSTIS-KNTRAILMNTPHNP 254 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~-----~~~~G~~~~~v~~~~~--~~~~d~~~l~~~i~-~~~~~i~~~~p~NP 254 (434)
+..++.+++++||+|++++|.|+.+... ++..|.+++.++++.+ ++.+|++.+++++. .+++++++++|+||
T Consensus 94 ~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~ 173 (402)
T cd00378 94 NLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP 173 (402)
T ss_pred HHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC
Confidence 9999999999999999999999876443 5667888888877653 68999999999985 57899999888887
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcC-CccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeCh-hh
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVY-DKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP-HL 332 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay-~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~-~~ 332 (434)
+ .. ++++|+++|++||+++|+|++| .++.+.+..... +. .. .+++.|++|.+ +|+|.||+++++ ++
T Consensus 174 ~--~~---~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~--~~--~~-dv~~~s~sK~l--~G~~gg~i~~~~~~~ 241 (402)
T cd00378 174 R--PI---DFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP--LP--GA-DVVTTTTHKTL--RGPRGGLILTRKGEL 241 (402)
T ss_pred C--Cc---CHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCc--cc--CC-cEEEeccccCC--CCCCceEEEeccHHH
Confidence 4 33 4778999999999999999995 555444422211 11 11 36899999987 689999999987 88
Q ss_pred HHHHHHHhhccccCCchH-HHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEee-cCCeeEEEeeecCCCCC
Q 013883 333 TWGVRQAHSFLTFATSTP-MQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVF-PSSGTYFVVVDHTPFGH 409 (434)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~-~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~ 409 (434)
++++.........+.+.+ .+.++..++... ..+.++.+++++++++.+.+.|++.|+.+. .+.+++++|+++.+.+.
T Consensus 242 ~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~v~v~~~~~~~ 321 (402)
T cd00378 242 AKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDNHLVLVDLRPKGI 321 (402)
T ss_pred HHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCCeEEEEeCCccCC
Confidence 888876654333333333 333334444432 225677788899999999999999999876 45788999999864433
Q ss_pred CCHHHHHHHHHHhcCeEEEC
Q 013883 410 ETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 410 ~~~~~~~~~Ll~~~GV~v~p 429 (434)
+...+. ++++++||.+.+
T Consensus 322 -~~~~~~-~~l~~~gI~v~~ 339 (402)
T cd00378 322 -TGKAAE-DALEEAGITVNK 339 (402)
T ss_pred -CHHHHH-HHHHHcCcEEcC
Confidence 344444 456778999975
No 134
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=1.7e-25 Score=223.86 Aligned_cols=299 Identities=19% Similarity=0.197 Sum_probs=212.0
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC--CCCCCCCC-------CcHHHHHHHHHHHHhhcCCCC-CCCCcEEEcCCh
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG--KNQYARGH-------GVPEFNSAIASRFKKDSGLEV-DPEKEVTVTSGC 179 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~--~~~Y~~~~-------G~~~lr~~ia~~l~~~~g~~~-~~~~~i~~t~G~ 179 (434)
+.+.|..+.-+ +.|+.+.+++.+.+... ...+.... .+.++|+.++++++ . +++ +|++|+|+
T Consensus 16 ~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~-~i~~t~g~ 87 (398)
T TIGR03392 16 GTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLN------APDAE-NIVWTRGT 87 (398)
T ss_pred CeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhC------CCCCC-eEEEeCCh
Confidence 56788777554 35567888887776532 11222221 23457788887776 3 355 89999999
Q ss_pred HHHHHHHHHHc----cCCCCeEEEcCCCchh----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCC
Q 013883 180 TEAIAATILGL----INPGDEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTP 251 (434)
Q Consensus 180 ~~ai~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p 251 (434)
++++..++.++ +++||+|++++|.|++ +...++..|++++.++.+. ++.+|++.+++++++++++|++++|
T Consensus 88 t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~~~~~l~~~i~~~t~lv~i~~~ 166 (398)
T TIGR03392 88 TESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA-DLLPDIRQLPELLTPRTRILALGQM 166 (398)
T ss_pred HHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC-CCCcCHHHHHHHhccCceEEEEECc
Confidence 99999999887 5899999999999876 4556788999999999875 5678999999999999999999999
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh
Q 013883 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH 331 (434)
Q Consensus 252 ~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~ 331 (434)
+||||.+++ +++|+++|+++|+++|+|++|....+. ..+.. .+..+++.|++|.+|.+| +||++++++
T Consensus 167 ~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~---~~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~~~~ 234 (398)
T TIGR03392 167 SNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGP---PDVQA----LDIDFYAFSGHKLYGPTG--IGVLYGKTE 234 (398)
T ss_pred cccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCC---CChhh----cCCCEEEEecccccCCCc--eEEEEEcHH
Confidence 999999986 566899999999999999999754321 11211 123467788889888666 899999988
Q ss_pred hHHHHHHHh---------------------hccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhC-C
Q 013883 332 LTWGVRQAH---------------------SFLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAV-G 388 (434)
Q Consensus 332 ~~~~l~~~~---------------------~~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g 388 (434)
+++++.... ++...+++.+...++..+++.. +...++..++.++.++.+.+.|+++ |
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g 314 (398)
T TIGR03392 235 LLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPG 314 (398)
T ss_pred HHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 877653221 1111234444555555555432 1224466677788889999999886 7
Q ss_pred CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 389 FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+.+..+..+.++.+.+. +. ++.+++.+|. ++||.+.+|..|
T Consensus 315 ~~~~~~~~~~i~~~~~~--~~-~~~~l~~~L~-~~gI~v~~g~~~ 355 (398)
T TIGR03392 315 FRSFRCPGSSLLAFDFA--GV-HHSDLAALLA-ESGIALRAGQHC 355 (398)
T ss_pred eEEeCCCCCcEEEEEeC--Cc-CHHHHHHHHH-hCCEEEecCccc
Confidence 87765444445555543 22 4667888775 569999998743
No 135
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=7.2e-26 Score=224.07 Aligned_cols=260 Identities=16% Similarity=0.150 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PD 227 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~ 227 (434)
.++++.++++++ .+ ++++++|+++++..++.+++++||.|+++.+.|+.....++..|++++.++.+. .+
T Consensus 54 ~~~~e~lA~~~g--------~~-~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~ 124 (370)
T TIGR02539 54 HDFLEDLAEFLG--------MD-EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPE 124 (370)
T ss_pred HHHHHHHHHHhC--------CC-ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCccc
Confidence 466777777765 23 567789999999999999999999999998987776678899999999999864 35
Q ss_pred CCCCHHHHHhhccc-------CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCC
Q 013883 228 FAIPIEELKSTISK-------NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLP 300 (434)
Q Consensus 228 ~~~d~~~l~~~i~~-------~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~ 300 (434)
+.+|++.+++++++ ++++|++++|+||||...+ +++|+++|+++|+++|+||+|...... .....
T Consensus 125 ~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~---~~~~~-- 196 (370)
T TIGR02539 125 YKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMP---VSAKE-- 196 (370)
T ss_pred CCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcC---CCHHH--
Confidence 88999999999863 6789999999999998775 667888999999999999999874211 11111
Q ss_pred CCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC--------CchHHHHHHHHHHhCChHHHHHHHHH
Q 013883 301 GMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA--------TSTPMQWAATAALRAPETYYEELKRD 372 (434)
Q Consensus 301 ~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~--------~~~~~q~a~~~~L~~~~~~~~~~~~~ 372 (434)
.+..++++|++|.++ +|.|+||+++++++++.++.......++ .....+.++..+|....++++...+.
T Consensus 197 --~~~di~v~s~sK~~~-~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~ 273 (370)
T TIGR02539 197 --IGADFIVGSGHKSMA-ASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEE 273 (370)
T ss_pred --cCCCEEEeeCccccc-CCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 134577899999999 6778999999999999887765432221 11124555555665434455555555
Q ss_pred HHHHHHHHHHHhhhCCCEee--cCCeeEEEeeecCCCC------CCCHHHHHHHHHHhcCeE-EECC
Q 013883 373 YSAKKAILVEGLNAVGFKVF--PSSGTYFVVVDHTPFG------HETDIAFCEYLIKEVGVV-AIPT 430 (434)
Q Consensus 373 ~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~Ll~~~GV~-v~pG 430 (434)
++. ++++++.|+++|+++. .+....|++++++... ......+.++|.+ +||. +.||
T Consensus 274 ~~~-~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e-~GI~~ir~~ 338 (370)
T TIGR02539 274 VKK-TRWFVAELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKK-RGIHGIRSG 338 (370)
T ss_pred HHH-HHHHHHHHHhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHh-CCCccccCC
Confidence 444 4589999999999864 2344556667653210 1123457777765 5997 7765
No 136
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=8.5e-26 Score=225.91 Aligned_cols=305 Identities=16% Similarity=0.108 Sum_probs=210.7
Q ss_pred cCCeeEeCCCCC--CCCC-cHHHHHHHHHHHHcCC---CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 108 KHGAINLGQGFP--NFDG-PDFVKDAAIQAIRDGK---NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 108 ~~~~i~l~~g~p--~~~~-~~~v~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
+.+.|||..|.+ .+.. +|.+.+++.+++++.. ..|.+.. ..++++.+.+..+.. +++ ++++++|+++
T Consensus 42 g~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~-----~~~la~~l~~~~~~~-~~~-~v~~~~sgse 114 (398)
T PRK03244 42 GKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEP-----QIALAERLVELLGAP-EGG-RVFFCNSGAE 114 (398)
T ss_pred CCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHH-----HHHHHHHHHHhCCCC-CCC-EEEEeCchHH
Confidence 346799988733 3444 6889999999887632 2354332 234555555554422 345 8999999999
Q ss_pred HHHHHHHHccCCC-CeEEEcCCCchhHHHHHHH-cCCEEEEEEcCC--CCC----CCCHHHHHhhcccCCcEEEecCCCC
Q 013883 182 AIAATILGLINPG-DEVILFAPFYDSYEATLSM-AGAKIKCITLRP--PDF----AIPIEELKSTISKNTRAILMNTPHN 253 (434)
Q Consensus 182 ai~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~-~G~~~~~v~~~~--~~~----~~d~~~l~~~i~~~~~~i~~~~p~N 253 (434)
++..+++.+..+| +.|+..+++|+++...... .|......++.+ .+. ..|++.+++.+.+++++|+++.++|
T Consensus 115 a~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep~~~ 194 (398)
T PRK03244 115 ANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFLEPIQG 194 (398)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEEEEecccC
Confidence 9999998776666 5677778899887544332 232211111100 000 1278999999877889999998999
Q ss_pred CcccCCCHHH-HHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhh
Q 013883 254 PTGKMFTREE-LNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL 332 (434)
Q Consensus 254 PTG~~~~~e~-l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~ 332 (434)
|+|.+++.++ +++|.++|++||+++|+||+|.+|.+.+....+......+| +.+|||.+| +|+|+||+++++++
T Consensus 195 ~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pD----i~t~sK~l~-~G~~ig~~~~~~~~ 269 (398)
T PRK03244 195 EAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPD----VVTLAKGLG-GGLPIGACLAFGPA 269 (398)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCC----EEEEchhhh-CCcccEEEEEcHHH
Confidence 9999987655 99999999999999999999998766554332222211223 448899999 99999999999998
Q ss_pred HHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEee--cCCeeEEEeeecCCCCCC
Q 013883 333 TWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVF--PSSGTYFVVVDHTPFGHE 410 (434)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~~~~~ 410 (434)
++.+.......+++.+++.+.++.++|+..++ ++..++++++++.+++.|+++++... ....|.++|+.+.+ .
T Consensus 270 ~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~---~ 344 (398)
T PRK03244 270 ADLLTPGLHGSTFGGNPVACAAALAVLDTIAS--EGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTA---P 344 (398)
T ss_pred HhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEec---c
Confidence 88776544556788999999999999874221 23456677778888888888655321 22356677777632 1
Q ss_pred CHHHHHHHHHHhcCeEEECC
Q 013883 411 TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 411 ~~~~~~~~Ll~~~GV~v~pG 430 (434)
...+++++|++ +||.+.|.
T Consensus 345 ~~~~~~~~l~~-~Gv~~~~~ 363 (398)
T PRK03244 345 VAKAVEAAARE-AGFLVNAV 363 (398)
T ss_pred HHHHHHHHHHH-CCeEEeec
Confidence 35678888866 49999874
No 137
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.94 E-value=5.8e-25 Score=220.12 Aligned_cols=296 Identities=18% Similarity=0.174 Sum_probs=206.4
Q ss_pred CeeEeCCC-CCCCCCcHHHHHHHHHHHHcCCCC-------CCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQG-FPNFDGPDFVKDAAIQAIRDGKNQ-------YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~~~~-------Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
..++|+.+ |.++..+|.+++++.++++..... |.......+|+++++++++ . +. .+++++| ++
T Consensus 46 ~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g----~---~~-~l~~~sG-~~ 116 (402)
T TIGR01821 46 DVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG----K---ES-ALVFTSG-YV 116 (402)
T ss_pred eEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC----C---Ce-EEEECch-HH
Confidence 57888776 999999999999999998763221 1111123456666666654 1 22 4555555 88
Q ss_pred HHHHHHHHccC--CCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc---c-CCcEEEecCCCCCc
Q 013883 182 AIAATILGLIN--PGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS---K-NTRAILMNTPHNPT 255 (434)
Q Consensus 182 ai~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~---~-~~~~i~~~~p~NPT 255 (434)
++..++..+.. +++.|+.....|......+...|+++..++.. |++++++.++ + ++++|++++|+||+
T Consensus 117 an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~~~~~v~~e~~~~~~ 190 (402)
T TIGR01821 117 ANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRHN------DVAHLEKLLQSVDPNRPKIIAFESVYSMD 190 (402)
T ss_pred HHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECCC------CHHHHHHHHHhccCCCCeEEEEcCCCCCC
Confidence 88888887764 67777776667776777778888887665432 5667776664 2 57899999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC-CCceEEEccCChhhccccceeeeEEeChhhHH
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM-YERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~ 334 (434)
|.+.+ +++|.++|++||+++|+||+|....++.....+....+. .+.+++++||||.+|++| ||+++++++++
T Consensus 191 G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~~~~~ 264 (402)
T TIGR01821 191 GDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASRKLID 264 (402)
T ss_pred CCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCHHHHH
Confidence 99986 677889999999999999999854444322222111111 123578899999999888 99999999998
Q ss_pred HHHHHhhcc--ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCH
Q 013883 335 GVRQAHSFL--TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETD 412 (434)
Q Consensus 335 ~l~~~~~~~--~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (434)
.++...... +.+.++..+.++.++|+..++. +.+++++.++++++.+.|+++|+++.++.++++. +.+.. ....
T Consensus 265 ~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~i~~-i~~~~--~~~a 340 (402)
T TIGR01821 265 AIRSYAPGFIFTTSLPPAIAAGATASIRHLKES-QDLRRAHQENVKRLKNLLEALGIPVIPNPSHIVP-VIIGD--AALC 340 (402)
T ss_pred HHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCCCEEE-EEeCC--HHHH
Confidence 887654432 3345666777887888753322 4456667788999999999999988877777543 33321 0124
Q ss_pred HHHHHHHHHhcCeEEECC
Q 013883 413 IAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 413 ~~~~~~Ll~~~GV~v~pG 430 (434)
.+++++|++++||.+.|.
T Consensus 341 ~~~~~~L~~~~Gi~v~~~ 358 (402)
T TIGR01821 341 KKVSDLLLNKHGIYVQPI 358 (402)
T ss_pred HHHHHHHHhcCCEEEEeE
Confidence 578888877779999874
No 138
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.94 E-value=1.6e-25 Score=225.05 Aligned_cols=311 Identities=15% Similarity=0.142 Sum_probs=213.0
Q ss_pred cCCeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQG--FPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..| +..+. .+|.+.+++.+++... ..|....+..++...+++.+.+..+. +.+ ++++++|+++|+.
T Consensus 35 G~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~-~v~~~~sgsea~~ 110 (413)
T cd00610 35 GNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL-THFSLGFFYNEPAVELAELLLALTPE--GLD-KVFFVNSGTEAVE 110 (413)
T ss_pred CCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhC-cCccCcccCCHHHHHHHHHHHHhCCC--CCC-EEEEcCcHHHHHH
Confidence 3467999876 33444 6788999999988653 45555444567777788888777664 455 8999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHHcC-------------CEEEEEEcCC-----CCCCCCHHHHHhhccc---
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSMAG-------------AKIKCITLRP-----PDFAIPIEELKSTISK--- 241 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G-------------~~~~~v~~~~-----~~~~~d~~~l~~~i~~--- 241 (434)
.+++.+. .++|+|++.++.|+++.......+ .+++.+|+++ +++..|++.+++.+++
T Consensus 111 ~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 190 (413)
T cd00610 111 AALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPE 190 (413)
T ss_pred HHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCC
Confidence 9998774 678999999999999665443322 2355566542 1244589999998876
Q ss_pred CCcEEEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc
Q 013883 242 NTRAILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG 320 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 320 (434)
++++++++..+|++|..+ +.+.+++|.++|++||+++|+||+|.++...+...........++ +.|+||.++ .|
T Consensus 191 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d----~~t~sK~l~-~g 265 (413)
T cd00610 191 EVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPD----IVTLGKGLG-GG 265 (413)
T ss_pred CEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCC----eEEEccccc-Cc
Confidence 345555555577779866 677799999999999999999999998754443222221211122 458999999 58
Q ss_pred ceeeeEEeChhhHHHH--HHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----CCEeecC
Q 013883 321 WKIGWAIAPPHLTWGV--RQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----GFKVFPS 394 (434)
Q Consensus 321 ~R~G~~~~~~~~~~~l--~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~ 394 (434)
+|+||+++++++++.+ .......+++.+++.+.++.++|+..++ +++.++++++.+.+.+.|+++ ++.....
T Consensus 266 ~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 343 (413)
T cd00610 266 LPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE--EGLLENAAELGEYLRERLRELAEKHPLVGDVR 343 (413)
T ss_pred cccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEee
Confidence 9999999999998876 3333345677888888888877764221 245566777777777777654 2222222
Q ss_pred CeeEEEeeecCCCCC------CCHHHHHHHHHHhcCeEEECC
Q 013883 395 SGTYFVVVDHTPFGH------ETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 395 ~~~~~~~~~~~~~~~------~~~~~~~~~Ll~~~GV~v~pG 430 (434)
..+.++++.+..... ....++++.|+++ ||.+.|+
T Consensus 344 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gv~v~~~ 384 (413)
T cd00610 344 GRGLMIGIELVKDRATKPPDKELAAKIIKAALER-GLLLRPS 384 (413)
T ss_pred cCceEEEEEEecCCCcCCcchHHHHHHHHHHHHC-CeEEeec
Confidence 334555665533210 1356678877655 9999997
No 139
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.94 E-value=1.4e-24 Score=217.84 Aligned_cols=297 Identities=18% Similarity=0.179 Sum_probs=205.8
Q ss_pred CCeeEeCCC-CCCCCCcHHHHHHHHHHHHcCCCC-------CCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 109 HGAINLGQG-FPNFDGPDFVKDAAIQAIRDGKNQ-------YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 109 ~~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~~~~-------Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
...++|+.. |.++.++|.+.+++.++++..... |.+.....+|+++++++++ . ++ .+++++| .
T Consensus 46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g----~---~~-~~~~~sG-~ 116 (407)
T PRK09064 46 REVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG----K---EA-ALVFTSG-Y 116 (407)
T ss_pred ceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC----C---Cc-EEEECcH-H
Confidence 367899776 899999999999999888763221 2222224456666666553 1 33 5666666 5
Q ss_pred HHHHHHHHHccC--CCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc----cCCcEEEecCCCCC
Q 013883 181 EAIAATILGLIN--PGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS----KNTRAILMNTPHNP 254 (434)
Q Consensus 181 ~ai~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~----~~~~~i~~~~p~NP 254 (434)
++...++..+.. +++.|+.....|......+...|+++..++.. |++.+++.++ +++++|++++|+||
T Consensus 117 ~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~~~~~~~v~~~~v~s~ 190 (407)
T PRK09064 117 VSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRHN------DVAHLEELLAAADPDRPKLIAFESVYSM 190 (407)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECCC------CHHHHHHHHHhccCCCCeEEEEeCCCCC
Confidence 676666666554 77777666666777767777788887665532 6777777765 46789999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC-CCceEEEccCChhhccccceeeeEEeChhhH
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM-YERTVTMNSLGKTFSLTGWKIGWAIAPPHLT 333 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~ 333 (434)
+|.+.+ +++|.++|++||+++|+||+|....++.....+....+. .+.+++++||||.||++| ||++++++++
T Consensus 191 ~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~~~~ 264 (407)
T PRK09064 191 DGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSAALV 264 (407)
T ss_pred CccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecCHHHH
Confidence 999886 677888999999999999999844344322222222121 233688899999999887 9999999999
Q ss_pred HHHHHHhhcc--ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCC
Q 013883 334 WGVRQAHSFL--TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHET 411 (434)
Q Consensus 334 ~~l~~~~~~~--~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 411 (434)
+.++...... +.+.++..+.++.++|+..++. ...+++++++++++.+.|+++|+++.++.++++ ++.+.. ...
T Consensus 265 ~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~iv-~i~~~~--~~~ 340 (407)
T PRK09064 265 DAVRSYAPGFIFTTSLPPAIAAAALASIRHLKES-NEERERHQERAAKLKAALDAAGIPVMPNESHIV-PVMVGD--PEK 340 (407)
T ss_pred HHHHHhCccccccCcCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCEE-EEEeCC--HHH
Confidence 8887654432 2345555667776777643221 334678889999999999999998877766654 443321 113
Q ss_pred HHHHHHHHHHhcCeEEECC
Q 013883 412 DIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG 430 (434)
..+++++|++++||.+.+.
T Consensus 341 ~~~l~~~L~~~~gi~v~~~ 359 (407)
T PRK09064 341 CKKASDMLLEEHGIYVQPI 359 (407)
T ss_pred HHHHHHHHHHhCCEEEeeE
Confidence 5678888887779999874
No 140
>PRK02948 cysteine desulfurase; Provisional
Probab=99.94 E-value=5e-25 Score=219.14 Aligned_cols=297 Identities=16% Similarity=0.088 Sum_probs=206.2
Q ss_pred EeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCC--CC------cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 113 NLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARG--HG------VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 113 ~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~--~G------~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
.|..+..+ +.++.+.+++.+.++.....+... .| +.++|+.++++++ .+++ +|++++|+++++.
T Consensus 3 yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~-~i~~~~g~t~a~~ 74 (381)
T PRK02948 3 YLDYAATT-PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIG------GEEQ-GIYFTSGGTESNY 74 (381)
T ss_pred eccCCCCC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC------CCCC-eEEEeCcHHHHHH
Confidence 34444333 346667888877765422111111 11 2345555665554 4566 8999999999999
Q ss_pred HHHHHcc----CCCCeEEEcCCCchh---HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCccc
Q 013883 185 ATILGLI----NPGDEVILFAPFYDS---YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGK 257 (434)
Q Consensus 185 ~~~~~l~----~~gd~Vlv~~p~y~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~ 257 (434)
.++.+++ ++||.|++....|+. +...++..|++++.+++++ ++.+|++.+++++++++++|++++|+||||.
T Consensus 75 ~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~ 153 (381)
T PRK02948 75 LAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK-SGLIRLVDLERAITPDTVLASIQHANSEIGT 153 (381)
T ss_pred HHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC-CCCCCHHHHHHhcCCCCEEEEEECCcCCcEe
Confidence 8888775 578999998866655 4455677899999999874 5789999999999889999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhH-HHH
Q 013883 258 MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLT-WGV 336 (434)
Q Consensus 258 ~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~-~~l 336 (434)
+++ +++|.++|+++|+++|+|+++... .....+. ..+..+++.|++|.+|.+| +|++++++++. ..+
T Consensus 154 ~~~---~~~I~~l~~~~~~~vivD~~~~~g---~~~~~~~----~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~ 221 (381)
T PRK02948 154 IQP---IAEIGALLKKYNVLFHSDCVQTFG---KLPIDVF----EMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPV 221 (381)
T ss_pred ehh---HHHHHHHHHHcCCEEEEEChhhcc---ccccCcc----cCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCc
Confidence 986 556889999999999999765432 1111211 1245688899999999888 89999887651 111
Q ss_pred HH----HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCC-eeEEE--eeecCCCCC
Q 013883 337 RQ----AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSS-GTYFV--VVDHTPFGH 409 (434)
Q Consensus 337 ~~----~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~--~~~~~~~~~ 409 (434)
.. ...+..++++.+++.++..+|+...+++++.++++++.++.+++.|+++|+++.+.. .++.. .+.+...+.
T Consensus 222 ~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~~ 301 (381)
T PRK02948 222 FPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKGI 301 (381)
T ss_pred ccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCCC
Confidence 10 112245678888899998988875567888899999999999999999887665432 22211 111111122
Q ss_pred CCHHHHHHHHHHhcCeEEECCCC
Q 013883 410 ETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 410 ~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+..++..+| +++||.+.+|+.
T Consensus 302 -~~~~~~~~l-~~~gI~v~~g~~ 322 (381)
T PRK02948 302 -EGQYTMLEC-NRRGIAISTGSA 322 (381)
T ss_pred -CHHHHHHhc-ccCCEEEEchHh
Confidence 356677776 566999998863
No 141
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=2.5e-24 Score=212.49 Aligned_cols=258 Identities=17% Similarity=0.205 Sum_probs=184.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP- 226 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~- 226 (434)
+.++++.++++++ + + ++++++|+++++..++.+++++||+|+++.+.|......+...|++++.++.+++
T Consensus 46 ~~~l~~~la~~~g------~--~-~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 116 (361)
T cd06452 46 IKDFHHDLAEFLG------M--D-EARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHP 116 (361)
T ss_pred HHHHHHHHHHHcC------C--c-eEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCC
Confidence 4577888888775 2 4 7999999999999999999999999999999988877788999999999998763
Q ss_pred CCCCCHHHHHhhcc-------cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCC
Q 013883 227 DFAIPIEELKSTIS-------KNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASL 299 (434)
Q Consensus 227 ~~~~d~~~l~~~i~-------~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~ 299 (434)
++.+|++.++++++ +++++|++++|+||||... ++++|+++|+++|+++|+|++|..... ......
T Consensus 117 ~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~---~~~~i~~~~~~~~~~vivD~a~~~g~~---~~~~~~- 189 (361)
T cd06452 117 EYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH---DAKKIAKVCHEYGVPLLLNGAYTVGRM---PVSGKE- 189 (361)
T ss_pred CcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec---cHHHHHHHHHHcCCeEEEECCcccCCc---CCCHHH-
Confidence 46899999999886 3688999999999999875 577899999999999999999974221 111111
Q ss_pred CCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc--------cCCchHHHHHHHHHHhCChHHHHHHHH
Q 013883 300 PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT--------FATSTPMQWAATAALRAPETYYEELKR 371 (434)
Q Consensus 300 ~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~--------~~~~~~~q~a~~~~L~~~~~~~~~~~~ 371 (434)
.+..+++.|++|.++ ++.|+||+++++++++++.+.+.... .+.....+.++..+++...++++...+
T Consensus 190 ---~~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 265 (361)
T cd06452 190 ---LGADFIVGSGHKSMA-ASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDE 265 (361)
T ss_pred ---cCCCEEEecCCcccc-CCCCeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHH
Confidence 235689999999998 56699999999999888766543210 111112233344444332233333333
Q ss_pred HHHHHHHHHHHHhhhC-CCEee---cCCeeEEEeeecCCC------CCCCHHHHHHHHHHhcCeEEE
Q 013883 372 DYSAKKAILVEGLNAV-GFKVF---PSSGTYFVVVDHTPF------GHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 372 ~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
. .++++++++.|+++ |++++ +...++ +.++.... ...+..++.++|+++ ||.+.
T Consensus 266 ~-~~~~~~l~~~L~~l~g~~v~~~~~~~~n~-~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~~~ 329 (361)
T cd06452 266 E-VEKARWFVAELEKIEGIKQLGEKPKNHDL-MFFETPSFDEIAKKHKRRGYFLYSELKKR-GIHGI 329 (361)
T ss_pred H-HHHHHHHHHHHhcCCCeEEECCCCCCCce-EEEEcCCcchhhhhccccchhHHHHHHHc-CceEE
Confidence 2 34557888999998 88886 233443 34443211 011234688888665 99864
No 142
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.94 E-value=2.8e-24 Score=201.66 Aligned_cols=326 Identities=19% Similarity=0.235 Sum_probs=198.3
Q ss_pred hccccHHHHHHHHhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHH------c--CCCCC-CCCCCcHHHHHHHHHHHHhhc
Q 013883 93 KFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIR------D--GKNQY-ARGHGVPEFNSAIASRFKKDS 163 (434)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~------~--~~~~Y-~~~~G~~~lr~~ia~~l~~~~ 163 (434)
+.......++.++....-.+||+-|.|....-.. -..+..... + +.-.| +...|++|+|+..+++++
T Consensus 8 ~~~~~l~~~y~~~ka~~L~LdmtRGKPs~eQLdL-S~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r~l~a~llg--- 83 (425)
T PF12897_consen 8 ALLAELRKQYEELKAKGLKLDMTRGKPSPEQLDL-SNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEARELFAELLG--- 83 (425)
T ss_dssp HCHHHHHHHHHHHHHTT--EES---S--HHHHHG-GGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHHHHHHHHHT---
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCCHHHHhh-hHHHhcCCCCccccCCCccccCCCCccCChHHHHHHHHHHhC---
Confidence 3333444556666666667899988876211000 000000000 1 13479 888999999999999998
Q ss_pred CCCCCCCCcEEEc-CChHHHHHHHHHH-c----c--------CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCC
Q 013883 164 GLEVDPEKEVTVT-SGCTEAIAATILG-L----I--------NPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFA 229 (434)
Q Consensus 164 g~~~~~~~~i~~t-~G~~~ai~~~~~~-l----~--------~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~ 229 (434)
++++ +|++. |++...++-++.. + . .+.-+.++|.|.|.-|..+.+.+|++.+.||+. +.+
T Consensus 84 ---v~~~-~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Giemi~VpM~--~dG 157 (425)
T PF12897_consen 84 ---VPPE-NVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIEMIPVPMT--EDG 157 (425)
T ss_dssp ---S-GG-GEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-EEEEEEEE--TTE
T ss_pred ---CCHH-HEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcEEEecCCC--CCC
Confidence 8888 77775 4444555444332 2 1 112468999999999999999999999999999 467
Q ss_pred CCHHHHHhhccc--CCcEEEec-CCCCCcccCCCHHHHHHHHHH-HHHcCcEEEEcCcCCcccc-CC-CCc---cccCC-
Q 013883 230 IPIEELKSTISK--NTRAILMN-TPHNPTGKMFTREELNVIASL-CIENDVLVFSDEVYDKLAF-EM-DHI---SIASL- 299 (434)
Q Consensus 230 ~d~~~l~~~i~~--~~~~i~~~-~p~NPTG~~~~~e~l~~i~~l-a~~~~~~iI~Deay~~~~~-~~-~~~---~~~~~- 299 (434)
+|+|.+++++.+ ..|.|+.+ .-+||||.++|.|..++++.+ +...|+.|+.|++|.--.+ +. ... .+...
T Consensus 158 PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~ 237 (425)
T PF12897_consen 158 PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDAC 237 (425)
T ss_dssp E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHH
T ss_pred CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHH
Confidence 899999999854 45666543 339999999999999999987 3457999999999986655 22 111 12111
Q ss_pred --CCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCCh----HHHHHHHHHH
Q 013883 300 --PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPE----TYYEELKRDY 373 (434)
Q Consensus 300 --~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~----~~~~~~~~~~ 373 (434)
.+.+++++.+.|.||.- ++|-+++++.++++-++.+++.....+.++.-..|..-...+.+.+ .++++.++.+
T Consensus 238 ~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il 316 (425)
T PF12897_consen 238 AKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAIL 316 (425)
T ss_dssp HHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHH
T ss_pred HHcCCCCeEEEEecccccc-cCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHH
Confidence 45678999999999986 4999999999999999999888777889999999999999999854 4555556666
Q ss_pred HHHHHHHHHHhhh-----CC-CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC-CCCC
Q 013883 374 SAKKAILVEGLNA-----VG-FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP-TSVF 433 (434)
Q Consensus 374 ~~~~~~l~~~L~~-----~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p-G~~F 433 (434)
+-+.+...+.|++ .| ..|..|.||||++++..+ | .+.+++ .|.+++||.++| |+.|
T Consensus 317 ~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-G--~AkrvV-~lakeAGV~LT~AGAtf 379 (425)
T PF12897_consen 317 RPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-G--TAKRVV-ELAKEAGVALTPAGATF 379 (425)
T ss_dssp HHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-T---HHHHH-HHHHHTTEE---TTTTS
T ss_pred hhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-C--hHHHHH-HHHHHhCceeCCCCCCC
Confidence 6666666665544 33 478899999999998754 2 344554 466888999999 7766
No 143
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.94 E-value=2.9e-24 Score=214.84 Aligned_cols=297 Identities=18% Similarity=0.170 Sum_probs=204.8
Q ss_pred eeEeCCCCCCCCCcHHHHHHHHHHHHcCC----CCCCCCCCc----HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 111 AINLGQGFPNFDGPDFVKDAAIQAIRDGK----NQYARGHGV----PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 111 ~i~l~~g~p~~~~~~~v~~~~~~~~~~~~----~~Y~~~~G~----~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
.+.|..+-+.. +++.+++++.+.+.+.. ..|....+. .++|+.++++++ .+++ +|++++|++++
T Consensus 18 ~~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~------~~~~-~v~~~~~~t~~ 89 (397)
T TIGR01976 18 RVFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLN------ADPP-EVVFGANATSL 89 (397)
T ss_pred eEEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcC------CCCC-eEEEeCCHHHH
Confidence 57787765553 55667888888775421 234443343 355666666554 3455 79999999999
Q ss_pred HHHHHHHc---cCCCCeEEEcCCCchhHH----HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCc
Q 013883 183 IAATILGL---INPGDEVILFAPFYDSYE----ATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPT 255 (434)
Q Consensus 183 i~~~~~~l---~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPT 255 (434)
+..++.++ +++||+|++.+|.|++.. ..++..|++++.++.+++++.+|++.+++++++++++|++++|+|||
T Consensus 90 l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~t 169 (397)
T TIGR01976 90 TFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTL 169 (397)
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCC
Confidence 98777665 689999999999887643 45677899999999886568899999999999899999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHH
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG 335 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~ 335 (434)
|.+.+ +++|.++|++||+++|+|+++... ... ..+.. .+..+++.|++|.+| +|+|+++++++++++
T Consensus 170 G~~~~---~~~i~~~~~~~~~~~ivD~a~~~~---~~~---~~~~~-~~~d~~~~s~~K~~g---~~~G~l~~~~~~~~~ 236 (397)
T TIGR01976 170 GSIVD---LAAITELVHAAGALVVVDAVHYAP---HGL---IDVQA-TGADFLTCSAYKFFG---PHMGILWGRPELLMN 236 (397)
T ss_pred CccCC---HHHHHHHHHHcCCEEEEehhhhcc---ccC---CCHHH-cCCCEEEEechhhcC---CceEEEEEcHHHHhh
Confidence 99985 777999999999999999997531 111 11211 233466789999875 469999999998876
Q ss_pred HHHHhhcc----------ccCCchHH---HHHHHHHHhCCh------------HHHHHHHHHHHHHHHHHHHHhhhCC-C
Q 013883 336 VRQAHSFL----------TFATSTPM---QWAATAALRAPE------------TYYEELKRDYSAKKAILVEGLNAVG-F 389 (434)
Q Consensus 336 l~~~~~~~----------~~~~~~~~---q~a~~~~L~~~~------------~~~~~~~~~~~~~~~~l~~~L~~~g-~ 389 (434)
+....... ..+++... ..++...+.+.. ++.++.+++..+.++++++.|++++ +
T Consensus 237 l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~ 316 (397)
T TIGR01976 237 LPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGV 316 (397)
T ss_pred CCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 65432211 11222222 233333333211 1356667777888899999998875 8
Q ss_pred EeecC-----CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 390 KVFPS-----SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 390 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+++.+ .++++ .+.+. +. +..++.++|.+ +||.+..|..|
T Consensus 317 ~~~~~~~~~~~~~~~-~~~~~--~~-~~~~l~~~L~~-~gI~v~~~~~~ 360 (397)
T TIGR01976 317 TLYGVARLAARVPTV-SFTVH--GL-PPQRVVRRLAD-QGIDAWAGHFY 360 (397)
T ss_pred EEeCCCCccCCCceE-EEEeC--Cc-CHHHHHHHHHH-CCeEEEeCccc
Confidence 87654 45543 34432 22 46678888855 59999987543
No 144
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=3.1e-24 Score=215.19 Aligned_cols=293 Identities=18% Similarity=0.169 Sum_probs=204.8
Q ss_pred cCCeeEeCCC-CCCCCCcHHHHHHHHHHHHcC---C---CCCCC-CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCCh
Q 013883 108 KHGAINLGQG-FPNFDGPDFVKDAAIQAIRDG---K---NQYAR-GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGC 179 (434)
Q Consensus 108 ~~~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~---~---~~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~ 179 (434)
+...+||+.. |.++...|.+++++.+++.+. . ..|.. .....+|++.++++++ .+ .+++++|+
T Consensus 53 g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~-~~~~~~sG 123 (407)
T PRK07179 53 GPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTG--------FE-SCLLCQSG 123 (407)
T ss_pred CCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhC--------CC-cEEEECCH
Confidence 3457899765 899999999999999988652 1 11211 1124567777777764 24 56789999
Q ss_pred HHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccC
Q 013883 180 TEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKM 258 (434)
Q Consensus 180 ~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~ 258 (434)
++|+..+++++..+||.|++..+.|......+...|++++.++. .|++.+++++++ ++++|++++|+||||.+
T Consensus 124 ~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i 197 (407)
T PRK07179 124 WAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH------NDVDHLRRQIERHGPGIIVVDSVYSTTGTI 197 (407)
T ss_pred HHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC------CCHHHHHHHHHhcCCeEEEECCCCCCCCcc
Confidence 99999999999999999999999999888888889988766543 389999999976 57888899999999999
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCcc-ccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHH
Q 013883 259 FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHIS-IASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVR 337 (434)
Q Consensus 259 ~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~ 337 (434)
.+ +++|.++|+++|+++|+||+|....++..... +..+.......+++.|++|.+| .|+||+++++++++.+.
T Consensus 198 ~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~~~~~~~~ 271 (407)
T PRK07179 198 AP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPRELAEYVP 271 (407)
T ss_pred cc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCHHHHHHHH
Confidence 97 56788999999999999999986544332222 1122111122488899999997 26999999998887776
Q ss_pred HHhhcccc--CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHH
Q 013883 338 QAHSFLTF--ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAF 415 (434)
Q Consensus 338 ~~~~~~~~--~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (434)
.......+ +.+.....++.++|+.. +..++.+++++++++++++.|+++|+++. +.+. ++++.+.. ..+...+
T Consensus 272 ~~~~~~~~~~t~~~~~~aa~~aal~~~-~~~~~~~~~l~~~~~~l~~~L~~~g~~v~-~~~~-i~~l~~~~--~~~~~~~ 346 (407)
T PRK07179 272 FVSYPAIFSSTLLPHEIAGLEATLEVI-ESADDRRARLHANARFLREGLSELGYNIR-SESQ-IIALETGS--ERNTEVL 346 (407)
T ss_pred HhCcCeeeCCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCCCCC-CCCC-EEEEEeCC--HHHHHHH
Confidence 54432222 22223233333445432 22345678899999999999999888776 4444 44554321 0123455
Q ss_pred HHHHHHhcCeEE
Q 013883 416 CEYLIKEVGVVA 427 (434)
Q Consensus 416 ~~~Ll~~~GV~v 427 (434)
.+.|. ++||.+
T Consensus 347 ~~~L~-~~GI~~ 357 (407)
T PRK07179 347 RDALE-ERNVFG 357 (407)
T ss_pred HHHHH-HCCceE
Confidence 55664 569973
No 145
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.94 E-value=1.3e-24 Score=217.43 Aligned_cols=300 Identities=17% Similarity=0.158 Sum_probs=207.7
Q ss_pred cCCeeEeCCC----CCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 108 KHGAINLGQG----FPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 108 ~~~~i~l~~g----~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+...|||..| +-++ .+|.+.+++.+++.+... +...... +...++++.+.+..+ .+ .+++++++++|+
T Consensus 39 G~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~-~~~~~~~-~~~~~l~~~l~~~~~----~~-~~~~~~sGseA~ 110 (403)
T PRK05093 39 GKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWH-ISNVFTN-EPALRLAKKLIDATF----AE-RVFFANSGAEAN 110 (403)
T ss_pred CCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCc-ccCccCC-HHHHHHHHHHHhhCC----CC-EEEEeCchHHHH
Confidence 3357898766 3344 678888889888875321 1111122 233455666654432 24 799999999999
Q ss_pred HHHHHHcc--------CCCCeEEEcCCCchhHHHHH-HHcC------------CEEEEEEcCCCCCCCCHHHHHhhcccC
Q 013883 184 AATILGLI--------NPGDEVILFAPFYDSYEATL-SMAG------------AKIKCITLRPPDFAIPIEELKSTISKN 242 (434)
Q Consensus 184 ~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~-~~~G------------~~~~~v~~~~~~~~~d~~~l~~~i~~~ 242 (434)
..+++... ...+.|+..+-.|++..... ...| .+++.++.. |++.+++.+.++
T Consensus 111 e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~l~~~l~~~ 184 (403)
T PRK05093 111 EAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN------DLAAVKAVIDDH 184 (403)
T ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC------CHHHHHHHhcCC
Confidence 99987542 12356888888777754322 2211 112222221 789999999878
Q ss_pred CcEEEecCCCCCcccCC--CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc
Q 013883 243 TRAILMNTPHNPTGKMF--TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG 320 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~~~--~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 320 (434)
+++|+++ |.||+|-++ +.+.+++|+++|++||+++|+||+|.++.+.|.......+...++ +.||||.++ +|
T Consensus 185 ~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~s~sK~l~-~G 258 (403)
T PRK05093 185 TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD----ILTSAKALG-GG 258 (403)
T ss_pred eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC----EEEeccccc-CC
Confidence 8888877 888887654 889999999999999999999999999877765433222221233 679999999 99
Q ss_pred ceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC----CEeecCCe
Q 013883 321 WKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG----FKVFPSSG 396 (434)
Q Consensus 321 ~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~ 396 (434)
+|+||+++++++++.+.......+++.+++.|.++.++|+... ..++.++++++++.+.+.|++++ +....+.+
T Consensus 259 ~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 336 (403)
T PRK05093 259 FPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN--TPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGM 336 (403)
T ss_pred cceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeC
Confidence 9999999999998888764455677889999999999876432 13456788889999999998763 22334456
Q ss_pred eEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 397 TYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
|+++|+.+.+....++.+++++|+++ ||.+.|+
T Consensus 337 G~~~~~~l~~~~~~~~~~~~~~l~~~-Gv~v~~~ 369 (403)
T PRK05093 337 GLLIGAELKPQYKGRARDFLNAAAEE-GVMVLVA 369 (403)
T ss_pred ceEEEEEecCcchhHHHHHHHHHHHC-CeEEecC
Confidence 78888877432112366889888775 9999984
No 146
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.94 E-value=5.7e-24 Score=209.29 Aligned_cols=269 Identities=17% Similarity=0.168 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchh--HHHHHHHcCCEEEEEEcCCCC
Q 013883 150 EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS--YEATLSMAGAKIKCITLRPPD 227 (434)
Q Consensus 150 ~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~G~~~~~v~~~~~~ 227 (434)
++.+.+.+.+.+..|.+-+.. .|++++|+++++..++..++.+||+|++.++.+++ +...++..|++++.++.++ +
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~-~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~-~ 108 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHT-CVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSE-Y 108 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCc-EEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCC-C
Confidence 444444444444444432222 58889999999999999999888887766655443 4567788999999999864 5
Q ss_pred CCCCHHHHHhhccc--CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCc
Q 013883 228 FAIPIEELKSTISK--NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYER 305 (434)
Q Consensus 228 ~~~d~~~l~~~i~~--~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~ 305 (434)
+.+|++.+++++++ +.+.+++++++||||...+ +++|+++|++|++++|+|+++... .....+.. .+.
T Consensus 109 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~livD~~~s~g---~~~~~~~~----~~~ 178 (355)
T TIGR03301 109 EPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSHGAVLIVDAMSSFG---AIPIDIEE----LDV 178 (355)
T ss_pred CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHcCCEEEEEeccccC---Ccccchhh----cCc
Confidence 78999999999875 4566777889999999885 678999999999999999876542 11222221 245
Q ss_pred eEEEccCChhh-ccccceeeeEEeChhhHHHHHHHh-----------------hccccCCchHHHHHHHHHHhCCh--HH
Q 013883 306 TVTMNSLGKTF-SLTGWKIGWAIAPPHLTWGVRQAH-----------------SFLTFATSTPMQWAATAALRAPE--TY 365 (434)
Q Consensus 306 ~i~i~S~SK~~-g~~G~R~G~~~~~~~~~~~l~~~~-----------------~~~~~~~~~~~q~a~~~~L~~~~--~~ 365 (434)
.+++.|++|.+ |++| +||+++++++++.+.... ....++++.+.+.++..+|+... .+
T Consensus 179 d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~ 256 (355)
T TIGR03301 179 DALIASANKCLEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGG 256 (355)
T ss_pred cEEEecCCcccccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHccc
Confidence 57899999987 5455 799999999887765210 11245667777777777776432 23
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCEeecC---CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 366 YEELKRDYSAKKAILVEGLNAVGFKVFPS---SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+++.+++++++++++++.|+++|+++..+ .+++++|+.+++....+..++.++|.+ .||.+.||..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~i~~~~~~ 326 (355)
T TIGR03301 257 VPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKE-RGFVIYPGKLT 326 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHH-CCEEEECCccc
Confidence 67778889999999999999999886533 245566777643221234577777755 59999998643
No 147
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.94 E-value=2.1e-24 Score=219.09 Aligned_cols=297 Identities=19% Similarity=0.269 Sum_probs=206.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCC--CcHHHHHHHH---HHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGH--GVPEFNSAIA---SRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~--G~~~lr~~ia---~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
..++|+.|.+++..+..+.+..... +....|.+.. -...+++++. +.+.+.+|.+ .+ ++++++|+++++.
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~--~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~--~~-~v~~~~g~t~~~~ 143 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRS--EFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMD--VA-NASMYDGATALAE 143 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhch--hHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCC--cc-eEEecCcHHHHHH
Confidence 5678899998888887776655333 2223465511 1233555555 4446667753 45 7999999999999
Q ss_pred HHHHHcc-CCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCC
Q 013883 185 ATILGLI-NPGDEVILFAPFYDSYEATLSM----AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMF 259 (434)
Q Consensus 185 ~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~ 259 (434)
.++.++. .+||+|+++++.|+.+...+.. .|++++.+++++ + .+|++.+++++++++++|++++| ||||.+.
T Consensus 144 ~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~-~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~ 220 (447)
T PRK00451 144 AALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED-G-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIE 220 (447)
T ss_pred HHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC-C-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeC
Confidence 9888874 7999999999999998877654 699999999875 4 89999999999999999999999 8999986
Q ss_pred CHHHHHHHHHHHHHcCcEEEE--cCcCCccccCCCCccccCCCCCCCceEEEc---cCChhhccccceeeeEEeChhhHH
Q 013883 260 TREELNVIASLCIENDVLVFS--DEVYDKLAFEMDHISIASLPGMYERTVTMN---SLGKTFSLTGWKIGWAIAPPHLTW 334 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~--Deay~~~~~~~~~~~~~~~~~~~~~~i~i~---S~SK~~g~~G~R~G~~~~~~~~~~ 334 (434)
++++|+++|+++|+++|+ |.+..++. . .+...+..+++. +|||.+.+.|+|+||+++++++++
T Consensus 221 ---~l~~I~~~a~~~~~~~iv~~d~~~~g~~-----~----~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~ 288 (447)
T PRK00451 221 ---DLEEIAEIAHAGGALFIVGVDPVSLGLL-----K----PPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVR 288 (447)
T ss_pred ---CHHHHHHHHHHCCCEEEEEcChHHhccC-----C----CcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHh
Confidence 477799999999999998 43322111 0 011223334444 788888888999999999988877
Q ss_pred HH----------------------------HHHhhccccCCchHHH-HHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHh
Q 013883 335 GV----------------------------RQAHSFLTFATSTPMQ-WAATAALR-APETYYEELKRDYSAKKAILVEGL 384 (434)
Q Consensus 335 ~l----------------------------~~~~~~~~~~~~~~~q-~a~~~~L~-~~~~~~~~~~~~~~~~~~~l~~~L 384 (434)
.+ +..+.....+.+...+ .+++.+|. ..+++++++++++.++++++.+.|
T Consensus 289 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L 368 (447)
T PRK00451 289 QMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERL 368 (447)
T ss_pred hCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Confidence 63 1111111222222233 33333444 245678999999999999999999
Q ss_pred hhC-CCEeecCCeeEEEe--eecCCCCCCCHHHHHHHHHHhcCeE-EECCCCC
Q 013883 385 NAV-GFKVFPSSGTYFVV--VDHTPFGHETDIAFCEYLIKEVGVV-AIPTSVF 433 (434)
Q Consensus 385 ~~~-g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Ll~~~GV~-v~pG~~F 433 (434)
+++ |+++. ++.+|.+ +++ +. +..+++++|+++ ||. ..+++.|
T Consensus 369 ~~~~g~~~~--~~~~~~~~~v~~---~~-~~~~~~~~L~~~-gi~~~~~~~~~ 414 (447)
T PRK00451 369 AEIGGVELF--DGPFFNEFVVRL---PK-PAEEVNEALLEK-GILGGYDLGRY 414 (447)
T ss_pred hhcCCEEec--CCCeEEEEEEec---CC-CHHHHHHHHHhc-CCCCCcccccc
Confidence 987 67775 4455543 443 12 467899999876 554 3455544
No 148
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=7.6e-24 Score=212.21 Aligned_cols=296 Identities=18% Similarity=0.204 Sum_probs=210.2
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCC-CCCC-C-------CCCcHHHHHHHHHHHHhhcCCCCC-CCCcEEEcCCh
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGK-NQYA-R-------GHGVPEFNSAIASRFKKDSGLEVD-PEKEVTVTSGC 179 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~-~~Y~-~-------~~G~~~lr~~ia~~l~~~~g~~~~-~~~~i~~t~G~ 179 (434)
+.+.|..+..+ +.|+.+.+++.+.+.+.. .... . ..++.++|+.++++++ .+ ++ +|++++|+
T Consensus 18 ~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~------~~~~~-~v~~~~g~ 89 (403)
T TIGR01979 18 PLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFIN------AASDE-EIVFTRGT 89 (403)
T ss_pred ceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------cCCCC-eEEEeCCH
Confidence 56788887665 355667788877665421 1000 0 1134577888888776 34 45 89999999
Q ss_pred HHHHHHHHHHc----cCCCCeEEEcCCCchhH----HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCC
Q 013883 180 TEAIAATILGL----INPGDEVILFAPFYDSY----EATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTP 251 (434)
Q Consensus 180 ~~ai~~~~~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p 251 (434)
++++.+++.++ +++||+|+++++.|++. .......|++++.++.+ +++.+|++.+++++++++++|++++|
T Consensus 90 t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~i~~~~~lv~~~~~ 168 (403)
T TIGR01979 90 TESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD-DDGTLDLDDLEKLLTEKTKLVAITHV 168 (403)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC-CCCCCCHHHHHHHhccCCeEEEEEcc
Confidence 99999988875 57899999999987763 45566789999999988 46789999999999999999999999
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh
Q 013883 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH 331 (434)
Q Consensus 252 ~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~ 331 (434)
+||||..++ +++|.++|+++|+++|+|++|..... ...+.. .+..+++.|++|.+|.+| +|+++++++
T Consensus 169 ~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~---~~~~~~----~~~d~~~~s~~K~~gp~G--~g~l~~~~~ 236 (403)
T TIGR01979 169 SNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHM---PVDVQA----LDCDFYVFSGHKMYGPTG--IGVLYGKEE 236 (403)
T ss_pred cccccccCC---HHHHHHHHHHcCCEEEEEchhhcCcc---ccCccc----cCCCEEEEecccccCCCC--ceEEEEchH
Confidence 999999996 56788999999999999999975321 111211 235688999999988666 899999988
Q ss_pred hHHHHHHHh---------------------hccccCCchHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHhhhC-C
Q 013883 332 LTWGVRQAH---------------------SFLTFATSTPMQWAATAALRAPET-YYEELKRDYSAKKAILVEGLNAV-G 388 (434)
Q Consensus 332 ~~~~l~~~~---------------------~~~~~~~~~~~q~a~~~~L~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g 388 (434)
+++.+.... ++...+++.....++..+++...+ ..++.+++..+.++.+.+.|+++ |
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g 316 (403)
T TIGR01979 237 LLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPG 316 (403)
T ss_pred HHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 776553111 011123444455566666653222 25667788888899999999887 7
Q ss_pred CEeecCC-----eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 389 FKVFPSS-----GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 389 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
++++.+. ++++.+ .+.. . +..++.+.| +++||.+.+|.
T Consensus 317 ~~~~~~~~~~~~~~~v~~-~~~~--~-~~~~~~~~L-~~~gI~v~~g~ 359 (403)
T TIGR01979 317 LRIYGPRDAEDRGGIISF-NVEG--V-HPHDVGTIL-DEEGIAVRSGH 359 (403)
T ss_pred EEEeCCCCccccCceEEE-EeCC--c-CHHHHHHHH-hhCCEEEcchh
Confidence 8887543 555443 3422 2 355676655 56799999875
No 149
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.94 E-value=5.6e-24 Score=209.65 Aligned_cols=289 Identities=16% Similarity=0.143 Sum_probs=202.0
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCC
Q 013883 123 GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAP 202 (434)
Q Consensus 123 ~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p 202 (434)
.++.+.+++.+.+. .+.|. +..++.+.+.+.+.+.+|. ++++.+++++|+++++..++.+++++||+|++..+
T Consensus 10 ~~~~v~~a~~~~~~--~~~~~---~~~~~~~~~~~~la~~~g~--~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~ 82 (356)
T cd06451 10 VPPRVLKAMNRPML--GHRSP---EFLALMDEILEGLRYVFQT--ENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVN 82 (356)
T ss_pred CCHHHHHHhCCCcc--CCCCH---HHHHHHHHHHHHHHHHhcC--CCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecC
Confidence 45666666543321 12222 2234445555555555554 33325788888899999999999999999999998
Q ss_pred Cchh--HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEE
Q 013883 203 FYDS--YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVF 279 (434)
Q Consensus 203 ~y~~--~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI 279 (434)
.|+. +...++..|++++.++.++ ++.+|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|
T Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~~~li 158 (356)
T cd06451 83 GVFGDRWADMAERYGADVDVVEKPW-GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKHDALLI 158 (356)
T ss_pred CchhHHHHHHHHHhCCCeEEeecCC-CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhcCCEEE
Confidence 8775 4677888999999999875 578999999999987 8999999999999999986 5558888999999999
Q ss_pred EcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHH---Hhh---------------
Q 013883 280 SDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQ---AHS--------------- 341 (434)
Q Consensus 280 ~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~---~~~--------------- 341 (434)
+|++|.. +.....+... +..+++.|.+|.++. +.++||++.++++++.+.. ...
T Consensus 159 ~D~~~~~---g~~~~~~~~~----~~d~~~~s~~K~l~~-p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (356)
T cd06451 159 VDAVSSL---GGEPFRMDEW----GVDVAYTGSQKALGA-PPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEG 230 (356)
T ss_pred Eeeehhc---cCcccccccc----CccEEEecCchhccC-CCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhccc
Confidence 9998763 2112222211 223667789999984 3468999999988877653 000
Q ss_pred -ccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCC---eeEEEeeecCCCCCCCHHHHH
Q 013883 342 -FLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSS---GTYFVVVDHTPFGHETDIAFC 416 (434)
Q Consensus 342 -~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 416 (434)
....+++...+.++.++++.. ...++...++.+++++.+.+.|++.|+.+..+. ++.+.|+.+.+ +. +..+++
T Consensus 231 ~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~ 308 (356)
T cd06451 231 YSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPE-GV-DGDEVV 308 (356)
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCC-CC-CHHHHH
Confidence 112233444455555565542 234567788888999999999998898876432 34455665532 22 577898
Q ss_pred HHHHHhcCeEEECCCC
Q 013883 417 EYLIKEVGVVAIPTSV 432 (434)
Q Consensus 417 ~~Ll~~~GV~v~pG~~ 432 (434)
++|.+++||.+.||..
T Consensus 309 ~~L~~~~gI~~~~g~~ 324 (356)
T cd06451 309 RRLMKRYNIEIAGGLG 324 (356)
T ss_pred HHHHHhCCEEEecccc
Confidence 8887666999998753
No 150
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=5.6e-24 Score=212.56 Aligned_cols=290 Identities=15% Similarity=0.148 Sum_probs=213.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchh
Q 013883 127 VKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS 206 (434)
Q Consensus 127 v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~ 206 (434)
+.+.+.+++......|. ..+..++++.+.+.+.+.+|.+ .++.+++++++++++..++..++++||+|++.++.|++
T Consensus 20 ~~~~V~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~~--~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~ 96 (401)
T PLN02409 20 IPERVLRAMNRPNEDHR-SPAFPALTKELLEDVKYIFKTK--SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFS 96 (401)
T ss_pred CCHHHHHHhcCCCCCCC-CHHHHHHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchh
Confidence 33344444444333332 2366788999999998888864 22268888899999999999999999999999998876
Q ss_pred H--HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc----CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 207 Y--EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK----NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 207 ~--~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
. ...++..|++++.++.++ +..+|++.+++++++ ++++|++++++||||.+++.+++.++++ |+++|+++|+
T Consensus 97 ~~~~~~~~~~g~~v~~v~~~~-~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g~~~vv 174 (401)
T PLN02409 97 LLWIDQMQRLNFDVDVVESPW-GQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHPALLLV 174 (401)
T ss_pred HHHHHHHHHcCCceEEEECCC-CCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhccCcEEEE
Confidence 5 467788999999999875 445899999999985 7899999999999999998777666655 9999999999
Q ss_pred cCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhh------------------c
Q 013883 281 DEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS------------------F 342 (434)
Q Consensus 281 Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~------------------~ 342 (434)
|+++.... ....+. . .+..+++.|.+|.++.| .++||++.+++.++++..... .
T Consensus 175 D~v~s~g~---~~id~~---~-~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 246 (401)
T PLN02409 175 DGVSSIGA---LDFRMD---E-WGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTY 246 (401)
T ss_pred EcccccCC---cccccc---c-cCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCC
Confidence 99987421 111111 1 13347777789999633 469999999998877653211 1
Q ss_pred cccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCC----eeEEEeeecCCCCCCCHHHHHH
Q 013883 343 LTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSS----GTYFVVVDHTPFGHETDIAFCE 417 (434)
Q Consensus 343 ~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 417 (434)
..++++...+.++..+|+.. +..+++++++++++++++++.|+++|+++..+. .+...++.++ .+. +..++..
T Consensus 247 ~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p-~~~-~~~~l~~ 324 (401)
T PLN02409 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVP-EGI-DSAEIVK 324 (401)
T ss_pred CCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCC-CCC-CHHHHHH
Confidence 13456666777777777752 345778889999999999999998898877542 2233455543 233 4678888
Q ss_pred HHHHhcCeEEECCC
Q 013883 418 YLIKEVGVVAIPTS 431 (434)
Q Consensus 418 ~Ll~~~GV~v~pG~ 431 (434)
+|++++||.+.+|.
T Consensus 325 ~l~~~~~i~i~~G~ 338 (401)
T PLN02409 325 NAWKKYNLSLGLGL 338 (401)
T ss_pred HHHHhCCEEEEcCC
Confidence 89889999999885
No 151
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.93 E-value=1.3e-23 Score=210.65 Aligned_cols=298 Identities=17% Similarity=0.162 Sum_probs=209.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCC-CCCCCCC--------CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGK-NQYARGH--------GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~-~~Y~~~~--------G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
+.+.|..+.-. +.++.+.+++.+.+.+.. +...... -+.++|++++++++ . .+++ +|++|+|++
T Consensus 23 ~~iYld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~----~-~~~~-~v~~t~g~t 95 (406)
T PRK09295 23 PLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFIN----A-RSAE-ELVFVRGTT 95 (406)
T ss_pred ceEEEeCcccc-cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcC----c-CCCC-eEEEeCCHH
Confidence 46777766443 345667788877775421 1111111 13466777777765 1 1455 899999999
Q ss_pred HHHHHHHHH----ccCCCCeEEEcCCCchh----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCC
Q 013883 181 EAIAATILG----LINPGDEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPH 252 (434)
Q Consensus 181 ~ai~~~~~~----l~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~ 252 (434)
+++..++.+ ++++||+|++.++.|++ +...++..|++++.++.++ ++.+|++.+++++++++++|++++|+
T Consensus 96 ~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~~t~lv~l~~~~ 174 (406)
T PRK09295 96 EGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP-DGTLQLETLPALFDERTRLLAITHVS 174 (406)
T ss_pred HHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC-CCCCCHHHHHHhcCCCcEEEEEecch
Confidence 999998876 46899999999987764 4556677899999999874 67799999999999999999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhh
Q 013883 253 NPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL 332 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~ 332 (434)
||||.+++ +++|+++|+++|+++|+|++|..... ...+.. .+..+++.|++|.+|.+| +||+++++++
T Consensus 175 n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~---~~~~~~----~~~D~~~~s~~K~~gp~G--~G~l~~~~~~ 242 (406)
T PRK09295 175 NVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHH---PVDVQA----LDCDFYVFSGHKLYGPTG--IGILYVKEAL 242 (406)
T ss_pred hcccccCC---HHHHHHHHHHcCCEEEEEcccccCcc---ccCchh----cCCCEEEeehhhccCCCC--cEEEEEchHh
Confidence 99999996 56688899999999999999975321 112211 234588899999888666 8999999887
Q ss_pred HHHHHHH----------------------hhccccCCchHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHhhhC-C
Q 013883 333 TWGVRQA----------------------HSFLTFATSTPMQWAATAALRAPET-YYEELKRDYSAKKAILVEGLNAV-G 388 (434)
Q Consensus 333 ~~~l~~~----------------------~~~~~~~~~~~~q~a~~~~L~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g 388 (434)
++.+... .++...+++.....++..+|+...+ ..+..+++.++.++++.+.|.++ |
T Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~ 322 (406)
T PRK09295 243 LQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPD 322 (406)
T ss_pred HhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7654311 1112234556666666667664322 34666778888889999999876 6
Q ss_pred CEeecCC--eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 389 FKVFPSS--GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 389 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+.+..+. .+++.| .++. .++.++...| +++||.+..|..
T Consensus 323 ~~~~~~~~~~~iv~~-~~~~---~~~~~~~~~L-~~~gI~v~~g~~ 363 (406)
T PRK09295 323 LTLYGPQNRLGVIAF-NLGK---HHAYDVGSFL-DNYGIAVRTGHH 363 (406)
T ss_pred EEEeCCCCCceEEEE-EECC---cCHHHHHHHH-HhCCeEEecccc
Confidence 7776543 454443 3321 2456776665 677999998864
No 152
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.93 E-value=4.6e-24 Score=211.89 Aligned_cols=303 Identities=16% Similarity=0.163 Sum_probs=208.5
Q ss_pred cCCeeEeCCCC----CCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 108 KHGAINLGQGF----PNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 108 ~~~~i~l~~g~----p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+...+||..|. -++ .+|.+.+++.+++++... .. .....++++++++++.+..+ .+ .+++++++++++
T Consensus 28 G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~~-~~-~~~~~~~~~~la~~l~~~~~----~~-~~~~~~sG~~a~ 99 (377)
T PRK02936 28 GKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIWH-VS-NLFTNSLQEEVASLLAENSA----GD-LVFFCNSGAEAN 99 (377)
T ss_pred CCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhccc-cc-cccCCHHHHHHHHHHHhcCC----CC-EEEEeCCcHHHH
Confidence 33678987773 344 578888999998876322 22 22446889999999986543 24 699999999999
Q ss_pred HHHHHHcc-CCC-CeEEEcCCCchhHHH-HHHHcCCEEE---EEEcCCCC-C--CCCHHHHHhhcccCCcEEEecCCCCC
Q 013883 184 AATILGLI-NPG-DEVILFAPFYDSYEA-TLSMAGAKIK---CITLRPPD-F--AIPIEELKSTISKNTRAILMNTPHNP 254 (434)
Q Consensus 184 ~~~~~~l~-~~g-d~Vlv~~p~y~~~~~-~~~~~G~~~~---~v~~~~~~-~--~~d~~~l~~~i~~~~~~i~~~~p~NP 254 (434)
..+++... -+| ++|++.++.|++... .+...+.... ..|..++. + ..|++.+++.+.+++++|++..++++
T Consensus 100 ~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~ 179 (377)
T PRK02936 100 EAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGE 179 (377)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCC
Confidence 99988542 234 679999998886432 2222232111 01111100 0 11789999999888999999888999
Q ss_pred cccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhH
Q 013883 255 TGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLT 333 (434)
Q Consensus 255 TG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~ 333 (434)
+|.. .+++.+++|.++|++||+++|+||+|.+|.+.+.......+...++ +.+|||.++ +|+|+||+++++++.
T Consensus 180 ~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d----i~t~sK~l~-~G~~ig~v~~~~~~~ 254 (377)
T PRK02936 180 GGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD----IVTVAKGLG-NGIPVGAMIGKKELG 254 (377)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc----EEEEccccc-CCCccEEEEEcHHHH
Confidence 9986 5788999999999999999999999998877664333222221223 347999999 999999999999998
Q ss_pred HHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh----CCC-EeecCCeeEEEeeecCCCC
Q 013883 334 WGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA----VGF-KVFPSSGTYFVVVDHTPFG 408 (434)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~-~~~~~~~~~~~~~~~~~~~ 408 (434)
+.+.......+++.+++.|.++.++|+... .++..++++++.+.+++.|++ .+. ..+.+ .|+++|+.+.+
T Consensus 255 ~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g~~~~i~~~~-- 329 (377)
T PRK02936 255 TAFGPGSHGSTFGGNPLAMAAAKEVLQVIK--QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRG-KGLMIGIECTE-- 329 (377)
T ss_pred hhccCCCCCCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEee-cceEEEEEecc--
Confidence 887655555677889999999999997631 123345556666666666654 222 22223 45788888743
Q ss_pred CCCHHHHHHHHHHhcCeEEECCC
Q 013883 409 HETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 409 ~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+...+.+.|. ++||.+.|+.
T Consensus 330 --~~~~~~~~l~-~~gv~v~~~g 349 (377)
T PRK02936 330 --EVAPVIEQLR-EEGLLVLSAG 349 (377)
T ss_pred --hHHHHHHHHH-HCCeEEecCC
Confidence 2556666664 5699999864
No 153
>PRK07049 methionine gamma-lyase; Validated
Probab=99.93 E-value=2.3e-24 Score=215.84 Aligned_cols=221 Identities=17% Similarity=0.196 Sum_probs=175.7
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcC
Q 013883 140 NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAG 215 (434)
Q Consensus 140 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G 215 (434)
.+|+.+. ...|++.++++.+ .+ ++++++|+++++..++.+++++||.|+++.|.|+.+...+ ..+|
T Consensus 78 ~R~~~Pt-~~~Le~~lA~leg--------~~-~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~G 147 (427)
T PRK07049 78 SRFNHPN-SEIVEDRLAVYEG--------AE-SAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFG 147 (427)
T ss_pred cCCCCcC-HHHHHHHHHHHhC--------CC-cEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcC
Confidence 4455543 4789999999875 44 5788888889999999999999999999999999997664 5679
Q ss_pred CEEEEEEcCCCCCCCCHHHHHhhcc-----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHH---cCcEEEEcCcCCcc
Q 013883 216 AKIKCITLRPPDFAIPIEELKSTIS-----KNTRAILMNTPHNPTGKMFTREELNVIASLCIE---NDVLVFSDEVYDKL 287 (434)
Q Consensus 216 ~~~~~v~~~~~~~~~d~~~l~~~i~-----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~---~~~~iI~Deay~~~ 287 (434)
++++.++.. .|++.+++++. +++++|++++|+||||.+++.+++.+|++.|++ +++++|+||+|...
T Consensus 148 i~~v~~~~~-----~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~ 222 (427)
T PRK07049 148 VGAVGFADG-----LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGP 222 (427)
T ss_pred cEEEEEeCC-----CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccc
Confidence 987777622 36677776663 478999999999999999999998888887654 68999999998764
Q ss_pred ccCCCCccccCCCCCCCceEEEccCChhhc-cccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHH
Q 013883 288 AFEMDHISIASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYY 366 (434)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~ 366 (434)
.+. .++ ..+..+++.|+||.+| .+|+|+||+++++++++.++..+.....+.+++.++++...|+. +
T Consensus 223 ~~~---~pl-----~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t----l 290 (427)
T PRK07049 223 VFQ---KPL-----EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLET----L 290 (427)
T ss_pred ccC---Ccc-----ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh----H
Confidence 321 111 1245688999999998 69999999999999999998887766777888888888777763 4
Q ss_pred HHHHHHHHHHHHHHHHHhhhC
Q 013883 367 EELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 367 ~~~~~~~~~~~~~l~~~L~~~ 387 (434)
....++..++++.+.+.|++.
T Consensus 291 ~~R~~~~~~~a~~la~~L~~~ 311 (427)
T PRK07049 291 VLRMERANRNARAVAEFLRDH 311 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 445566688899999999875
No 154
>PLN02242 methionine gamma-lyase
Probab=99.93 E-value=1.6e-24 Score=216.19 Aligned_cols=217 Identities=18% Similarity=0.238 Sum_probs=174.2
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH-----HHcCCEEEEEE
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL-----SMAGAKIKCIT 222 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~-----~~~G~~~~~v~ 222 (434)
..+|++.++++++ .+ .+++++|+++|+..++.+++++||+|+++.|.|+.+...+ +..|++++.++
T Consensus 78 ~~~LE~~lA~l~g--------~~-~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d 148 (418)
T PLN02242 78 VLNLGRQMAALEG--------TE-AAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVD 148 (418)
T ss_pred HHHHHHHHHHHhC--------CC-eEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence 4678888888775 34 6778999999999999999999999999999999887665 34787777665
Q ss_pred cCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCC
Q 013883 223 LRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPG 301 (434)
Q Consensus 223 ~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~ 301 (434)
.. |++.+++++++ ++++|++++|+||||.+. ++++|+++|++||++||+|++|..+.+.. ..+
T Consensus 149 ~~------d~e~l~~~i~~~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~-----~~~-- 212 (418)
T PLN02242 149 IT------DLEAVKKAVVPGKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP-----ARL-- 212 (418)
T ss_pred CC------CHHHHHHhcCcCCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH-----HHc--
Confidence 43 79999999988 599999999999999988 57889999999999999999998765421 111
Q ss_pred CCCceEEEccCChhhccccce-eeeEEeChhhHHHHHHHhhc--cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 013883 302 MYERTVTMNSLGKTFSLTGWK-IGWAIAPPHLTWGVRQAHSF--LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKA 378 (434)
Q Consensus 302 ~~~~~i~i~S~SK~~g~~G~R-~G~~~~~~~~~~~l~~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 378 (434)
+..+++.||||.++.+|++ .||+++++++++.++..+.. ...+.+...|.++..++... .+..+.+++.++++
T Consensus 213 --g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~--tl~~r~~~~~~~a~ 288 (418)
T PLN02242 213 --GADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLP--HLSLRMKEHCRRAM 288 (418)
T ss_pred --CCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCC--cHHHHHHHHHHHHH
Confidence 3468899999999888987 59999999999888776542 34555666677776666533 45566778999999
Q ss_pred HHHHHhhhCCCEeec
Q 013883 379 ILVEGLNAVGFKVFP 393 (434)
Q Consensus 379 ~l~~~L~~~g~~~~~ 393 (434)
.+.+.|++.++++..
T Consensus 289 ~la~~L~~~~~~V~y 303 (418)
T PLN02242 289 EYAKRMKELGLKVIY 303 (418)
T ss_pred HHHHHHHhCCCEEEC
Confidence 999999998877763
No 155
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.93 E-value=1.5e-23 Score=211.41 Aligned_cols=298 Identities=19% Similarity=0.201 Sum_probs=208.7
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCC------CCCC---CCcHHHHHHHHHHHHhhcCCCCC-CCCcEEEcCCh
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQ------YARG---HGVPEFNSAIASRFKKDSGLEVD-PEKEVTVTSGC 179 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~------Y~~~---~G~~~lr~~ia~~l~~~~g~~~~-~~~~i~~t~G~ 179 (434)
+.+.|..+..+ +.++.+.+++.+.+.+.... |... ..+.++|+.++++++ .+ ++ +|++|+|+
T Consensus 32 ~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~-~v~~t~g~ 103 (424)
T PLN02855 32 KLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN------ASTSR-EIVFTRNA 103 (424)
T ss_pred CeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC------CCCCC-EEEEeCCH
Confidence 46888887665 45677888887776542111 1110 113477788888776 32 45 89999999
Q ss_pred HHHHHHHHHH----ccCCCCeEEEcCCCchh----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCC
Q 013883 180 TEAIAATILG----LINPGDEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTP 251 (434)
Q Consensus 180 ~~ai~~~~~~----l~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p 251 (434)
++++..++.. .+++||+|++.++.|++ +...++..|++++.++.+. ++.+|++.+++++++++++|++++|
T Consensus 104 t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~-~~~~~~~~l~~~i~~~t~lv~i~~~ 182 (424)
T PLN02855 104 TEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTP-DEVLDVEQLKELLSEKTKLVATHHV 182 (424)
T ss_pred HHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCC-CCCcCHHHHHHHhccCceEEEEeCc
Confidence 9999999876 36899999999997765 4455677899999999875 4568999999999989999999999
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh
Q 013883 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH 331 (434)
Q Consensus 252 ~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~ 331 (434)
+||||.+++. ++|+++|+++|+++|+|++|.... .... +.. .+..+++.|++|.+|.+| +||++++++
T Consensus 183 ~n~tG~~~~~---~~I~~l~~~~g~~vivD~a~~~g~---~~~~---~~~-~~~d~~~~s~~K~~gp~G--~G~l~~~~~ 250 (424)
T PLN02855 183 SNVLGSILPV---EDIVHWAHAVGAKVLVDACQSVPH---MPVD---VQT-LGADFLVASSHKMCGPTG--IGFLWGKSD 250 (424)
T ss_pred cccccccCCH---HHHHHHHHHcCCEEEEEhhhhcCC---cCCC---chh-cCCCEEEeecccccCCCc--cEEEEEchh
Confidence 9999999974 568889999999999999996321 1111 211 223477999999877555 899999988
Q ss_pred hHHHHHHH---------------------hhccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhC-C
Q 013883 332 LTWGVRQA---------------------HSFLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAV-G 388 (434)
Q Consensus 332 ~~~~l~~~---------------------~~~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g 388 (434)
+++.+... .++...+++.....++..+|+.. +...++.+++.++.++.+++.|+++ |
T Consensus 251 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g 330 (424)
T PLN02855 251 LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPG 330 (424)
T ss_pred hhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 87665322 11112233444455555555532 2245677788888889999998876 7
Q ss_pred CEeecCC-------eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 389 FKVFPSS-------GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 389 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
++++.+. ++++ .+.++ +. +..++.+.|.+++||.+..|..
T Consensus 331 ~~i~~~~~~~~~~r~~~v-~~~~~--~~-~~~~v~~~L~~~~gI~v~~g~~ 377 (424)
T PLN02855 331 VRIYGPKPSEGVGRAALC-AFNVE--GI-HPTDLSTFLDQQHGVAIRSGHH 377 (424)
T ss_pred EEEeCCCcccccCcccEE-EEEEC--Cc-CHHHHHHHhcccCCEEEechhh
Confidence 8877432 3443 34442 22 4667888776656999998863
No 156
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=2.9e-23 Score=208.07 Aligned_cols=296 Identities=16% Similarity=0.130 Sum_probs=206.4
Q ss_pred CeeEeCCC-CCCCCCcHHHHHHHHHHHHcCCCC---CCCCCC----cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQG-FPNFDGPDFVKDAAIQAIRDGKNQ---YARGHG----VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~~~~---Y~~~~G----~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
..++|+.+ |.++..+|.+.+++.++++..... +....| ..+|++.++++++ . ++.+++++| ++
T Consensus 46 ~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g----~----~~~~~~~SG-~~ 116 (406)
T PRK13393 46 EVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG----K----EAALLFTSG-YV 116 (406)
T ss_pred cEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC----C----CcEEEeCCc-HH
Confidence 57888775 999999999999999998763221 111123 2445555555553 2 324555655 57
Q ss_pred HHHHHHHHccC--CCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc----cCCcEEEecCCCCCc
Q 013883 182 AIAATILGLIN--PGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS----KNTRAILMNTPHNPT 255 (434)
Q Consensus 182 ai~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPT 255 (434)
++..++..+.. +||.|+.....|......+...|.+++.++.. |++.+++.++ +++++|++++++|++
T Consensus 117 An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~~~~~v~~~~v~~~~ 190 (406)
T PRK13393 117 SNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHN------DPADLERKLSDLDPHRPKLVAFESVYSMD 190 (406)
T ss_pred HHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCC------CHHHHHHHHHhccCCCCEEEEEcCCCCCC
Confidence 88888887655 78877777778887788888888888777643 5666666554 256888999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC-CCceEEEccCChhhccccceeeeEEeChhhHH
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM-YERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~ 334 (434)
|.+.+ +++|.++|++||+++|+||+|....++.....+....+. .+.+++++||||.+|++| ||+++++++++
T Consensus 191 G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~~~~ 264 (406)
T PRK13393 191 GDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGSAALCD 264 (406)
T ss_pred CchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCHHHHH
Confidence 99986 677888999999999999999844444322222121111 223577899999999888 99999999988
Q ss_pred HHHHHhhcc--ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCH
Q 013883 335 GVRQAHSFL--TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETD 412 (434)
Q Consensus 335 ~l~~~~~~~--~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (434)
.++...... +.+.++..+.++.++|+..++.. ..+.+++++++++++.|++.|+++.++.++++.+ .+.. ..+.
T Consensus 265 ~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~-~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~i~~v-~~~~--~~~~ 340 (406)
T PRK13393 265 FIRSFASGFIFTTSLPPAVAAGALASVRHLKASS-AERERHQDRVARLRARLDKAGIPHLPNPSHIVPV-MVGD--PVLC 340 (406)
T ss_pred HHHHhCcCceecCccCHHHHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCCCeEEE-EeCC--HHHH
Confidence 887655432 33455666777878887533222 2346678889999999998898877777776543 2211 0134
Q ss_pred HHHHHHHHHhcCeEEECC
Q 013883 413 IAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 413 ~~~~~~Ll~~~GV~v~pG 430 (434)
.+++++|++++||.+.++
T Consensus 341 ~~l~~~L~~~~Gi~v~~~ 358 (406)
T PRK13393 341 KQISDELLDRYGIYVQPI 358 (406)
T ss_pred HHHHHHHHHhCCEEEEeE
Confidence 678888887679999874
No 157
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.93 E-value=2e-23 Score=206.26 Aligned_cols=293 Identities=16% Similarity=0.121 Sum_probs=202.0
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCC
Q 013883 124 PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPF 203 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~ 203 (434)
|-.+.+.+.+++......+.+ ...++.+.+.+.+.+..|.+-+.+ +|++++|+++++..++.++..+||.+++..+.
T Consensus 11 p~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~r~~la~l~~~~~~~~-~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~ 87 (363)
T TIGR02326 11 PLTTSRTVKEAMLFDWCTWDS--DYNIVVEQIRQQLLALATAEEGYT-SVLLQGSGTFAVEAVIGSAVPKDGKLLVVING 87 (363)
T ss_pred CCCCCHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHHHhCCCCCce-EEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCC
Confidence 334445555555443322222 223333333444444444422223 69999999999999999999999988887776
Q ss_pred chhH--HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEE
Q 013883 204 YDSY--EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK--NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVF 279 (434)
Q Consensus 204 y~~~--~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI 279 (434)
+++. ...++..|++++.++.++ ++.+|++.++++++. +++++.+++++||||+.++ +++|.++|++||+++|
T Consensus 88 ~~~~~~~~~a~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~li 163 (363)
T TIGR02326 88 AYGARIVQIAEYLGIPHHVVDTGE-VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTI 163 (363)
T ss_pred hhhHHHHHHHHHcCCceEEEeCCC-CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEE
Confidence 6555 466788999999999874 678899999999875 4577888899999999996 5679999999999999
Q ss_pred EcCcCCccccCCCCccccCCCCCCCceEEEccCChhh-ccccceeeeEEeChhhHHHHHHH------------------h
Q 013883 280 SDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTF-SLTGWKIGWAIAPPHLTWGVRQA------------------H 340 (434)
Q Consensus 280 ~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~~~~~~~~~~~l~~~------------------~ 340 (434)
+|+++.. +.....+..+ +..+++.|++|.+ |.+| +||++++++.++++... .
T Consensus 164 vD~~~~~---g~~~~~~~~~----~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (363)
T TIGR02326 164 VDAMSSF---GGIPIDIAEL----HIDYLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNH 234 (363)
T ss_pred EEccccc---cCcccchhhc----CccEEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccC
Confidence 9987753 2223333322 2347889999988 4445 89999998877654311 0
Q ss_pred hccccCCchHHHHHHHHHHhCC-hH-HHHHHHHHHHHHHHHHHHHhhhCCCEeecC---CeeEEEeeecCCCCCCCHHHH
Q 013883 341 SFLTFATSTPMQWAATAALRAP-ET-YYEELKRDYSAKKAILVEGLNAVGFKVFPS---SGTYFVVVDHTPFGHETDIAF 415 (434)
Q Consensus 341 ~~~~~~~~~~~q~a~~~~L~~~-~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 415 (434)
....++.+.+.+.++..+|+.. ++ .+++..++++++++++++.|+++|+.+..+ ..+...++.+++....+..++
T Consensus 235 ~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 314 (363)
T TIGR02326 235 GKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPDYRFADF 314 (363)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCCCCHHHH
Confidence 1123567777777777777653 22 366778999999999999999999887643 344455565543211145677
Q ss_pred HHHHHHhcCeEEECCCCC
Q 013883 416 CEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 416 ~~~Ll~~~GV~v~pG~~F 433 (434)
.+.|.+ +||.+.||..|
T Consensus 315 ~~~L~~-~gi~v~~g~~~ 331 (363)
T TIGR02326 315 YQRLKE-QGFVIYPGKVS 331 (363)
T ss_pred HHHHHH-CCEEEECCcCC
Confidence 777754 59999999654
No 158
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.93 E-value=3.5e-24 Score=213.91 Aligned_cols=298 Identities=20% Similarity=0.196 Sum_probs=203.2
Q ss_pred cCCeeEeCCCCCCCC---CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFPNFD---GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~---~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...+||..|.-... .+|.+.+++.++++...... ... ..+....+++.+....+ .+ .+++++++++|+.
T Consensus 39 G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~-~~~-~~~~~~~l~~~l~~~~~----~~-~~~~~~SGseA~e 111 (396)
T PRK04073 39 GNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTS-RAF-HSDQLGPWYEKVAKLTG----KD-MVLPMNTGAEAVE 111 (396)
T ss_pred CCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccc-ccc-CCHHHHHHHHHHHhcCC----CC-eEEEcCChHHHHH
Confidence 345788876633222 46888889988887632211 111 12333445555544332 24 7899999999999
Q ss_pred HHHHHccC---------CC-CeEEEcCCCchhHHH-HHHHcCCE------------EEEEEcCCCCCCCCHHHHHhhccc
Q 013883 185 ATILGLIN---------PG-DEVILFAPFYDSYEA-TLSMAGAK------------IKCITLRPPDFAIPIEELKSTISK 241 (434)
Q Consensus 185 ~~~~~l~~---------~g-d~Vlv~~p~y~~~~~-~~~~~G~~------------~~~v~~~~~~~~~d~~~l~~~i~~ 241 (434)
.+++.... +| ++|+..+-.|++... .+...+.. +..+++ .|++.+++++++
T Consensus 112 ~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~i~~ 185 (396)
T PRK04073 112 TAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY------GDLEALKAAITP 185 (396)
T ss_pred HHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC------CCHHHHHHhccc
Confidence 98886631 34 678888877776543 33333321 112222 278999999988
Q ss_pred CCcEEEecCCCCCcccCCCHH-HHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc
Q 013883 242 NTRAILMNTPHNPTGKMFTRE-ELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG 320 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~~~~~e-~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 320 (434)
++++|+++.++||||.+++.+ .+++|.++|++||+++|+||+|.+|.+.+...........++ +.+|||.+|.+|
T Consensus 186 ~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pd----i~~~sK~lg~gg 261 (396)
T PRK04073 186 NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPD----MYILGKALGGGV 261 (396)
T ss_pred CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCC----EEEecccccCCC
Confidence 899999999999999988754 699999999999999999999998866554322211111122 446899999888
Q ss_pred ceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC---CEeecCCee
Q 013883 321 WKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG---FKVFPSSGT 397 (434)
Q Consensus 321 ~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---~~~~~~~~~ 397 (434)
+|+||+++++++++.+.......+++.+++.+.++.++|+..++ +.+.++.+++++++.+.|++++ +...++.|.
T Consensus 262 ~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~--~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~ 339 (396)
T PRK04073 262 FPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEE--EKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGL 339 (396)
T ss_pred CcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHhhcCCcccceecceE
Confidence 99999999999988876555556788899999999999974221 2344666777888888888764 333445555
Q ss_pred EEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 398 YFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
|+++++.. ++.+++++|++ +||.+.|.
T Consensus 340 -~~~~~~~~----~~~~~~~~l~~-~Gv~~~~~ 366 (396)
T PRK04073 340 -FIGVELNE----PARPYCEALKE-EGLLCKET 366 (396)
T ss_pred -EEEEEecc----hHHHHHHHHHH-CCeEEecC
Confidence 46666532 46788888876 59999874
No 159
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.93 E-value=9.2e-24 Score=210.39 Aligned_cols=240 Identities=18% Similarity=0.259 Sum_probs=175.3
Q ss_pred CCCCCCcHHHHHHHHHH-----HHcCCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc
Q 013883 118 FPNFDGPDFVKDAAIQA-----IRDGKNQYA--RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL 190 (434)
Q Consensus 118 ~p~~~~~~~v~~~~~~~-----~~~~~~~Y~--~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l 190 (434)
.|.++.+..+.+...+. .+.....|. +..+..+|+++++++++ .+ ++++++|+++++..++.++
T Consensus 29 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~iA~~~g--------~~-~~l~~~sG~~Ai~~al~~l 99 (400)
T PRK06234 29 TPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEG--------GE-AAVVAASGMGAISSSLWSA 99 (400)
T ss_pred CCcccccceecCChHHHHHhhccCcCCCcccCCCCccHHHHHHHHHHHhC--------CC-cEEEEcCHHHHHHHHHHHH
Confidence 45666666555554432 112223365 55578899999999986 23 5778888889999999999
Q ss_pred cCCCCeEEEcCCCchhHHH----HHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 191 INPGDEVILFAPFYDSYEA----TLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 191 ~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
+++||+|+++.|.|..+.. .+...|++++.++.. |++++++++++++++|++++|+||||.+.+ +++
T Consensus 100 l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~------d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~ 170 (400)
T PRK06234 100 LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS------NLEEVRNALKANTKVVYLETPANPTLKVTD---IKA 170 (400)
T ss_pred hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC------CHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHH
Confidence 9999999999998876544 356789999888654 789999999999999999999999999985 677
Q ss_pred HHHHHHHc--CcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccccee-eeEEeChhhHHHHHHH--hh
Q 013883 267 IASLCIEN--DVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKI-GWAIAPPHLTWGVRQA--HS 341 (434)
Q Consensus 267 i~~la~~~--~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~-G~~~~~~~~~~~l~~~--~~ 341 (434)
|+++|+++ |+++|+|++|....+. . .+ ..+..+++.|++|.++.+|+|+ ||+++++++++.++.. +.
T Consensus 171 I~~la~~~~~~i~livDea~~~~~~~-~--~l-----~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~ 242 (400)
T PRK06234 171 ISNIAHENNKECLVFVDNTFCTPYIQ-R--PL-----QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKD 242 (400)
T ss_pred HHHHHHhcCCCCEEEEECCCCchhcC-C--ch-----hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHH
Confidence 88889997 9999999999876442 1 11 1234589999999998789875 9999999988877643 22
Q ss_pred ccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 342 FLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 342 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
......++...+.+...|+. +....++..++...+.+.|++.
T Consensus 243 ~~g~~l~p~~a~l~~~~l~t----l~~r~~~~~~na~~~a~~L~~~ 284 (400)
T PRK06234 243 MTGSVIGPFEAFLIIRGMKT----LQIRMEKHCKNAMKVAKFLESH 284 (400)
T ss_pred hcCCCCCHHHHHHHHhccCc----HHHHHHHHHHHHHHHHHHHHcC
Confidence 23445555555555555554 3334445556666677777653
No 160
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.93 E-value=5.2e-24 Score=214.60 Aligned_cols=307 Identities=19% Similarity=0.169 Sum_probs=211.2
Q ss_pred cCCeeEeCCCCCCC---CCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFPNF---DGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p~~---~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...+||..|.... -.+|.+.+++.+++.+....+.+..+..+|++++++++.. .+ ++++++|+++|+.
T Consensus 47 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~~-------~~-~v~~~~sGseA~e 118 (423)
T TIGR00713 47 GNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPS-------VE-MVRFVNSGTEATM 118 (423)
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCc-------cc-EEEEeCCHHHHHH
Confidence 44679998886543 2578899999999887544333555778888888887642 24 7999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHH---cCCEEEEEEcCCC-------C-C---CCCHHHHHhhcc---cCCcE
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSM---AGAKIKCITLRPP-------D-F---AIPIEELKSTIS---KNTRA 245 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~-------~-~---~~d~~~l~~~i~---~~~~~ 245 (434)
.+++... ..+++|+..+++|+++...+.. .|......+..+. + . ..|++.+++.+. +++++
T Consensus 119 ~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aa 198 (423)
T TIGR00713 119 SAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAG 198 (423)
T ss_pred HHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEE
Confidence 9887542 3458999999999997654433 1111111111100 0 0 127899999886 46778
Q ss_pred EEec-CCCCCcccCCC-HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccccee
Q 013883 246 ILMN-TPHNPTGKMFT-REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKI 323 (434)
Q Consensus 246 i~~~-~p~NPTG~~~~-~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~ 323 (434)
|++. .|+| +|.+++ .+.+++|.++|++||+++|+||+|.+|.++.. .....+...+| +.+|||.++ +|+|+
T Consensus 199 vi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~-~~~~~~~~~pD----i~t~sK~l~-~G~pi 271 (423)
T TIGR00713 199 VIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALG-GAQEYFGVEPD----LTTLGKIIG-GGLPV 271 (423)
T ss_pred EEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcc-hhHHHhCCCcc----hhhhhhhhc-CCCce
Confidence 8875 6788 798877 68899999999999999999999998854322 11111211233 458999999 99999
Q ss_pred eeEEeChhhHHHHHH---HhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEee-cCCee
Q 013883 324 GWAIAPPHLTWGVRQ---AHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVF-PSSGT 397 (434)
Q Consensus 324 G~~~~~~~~~~~l~~---~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~ 397 (434)
||+++++++++.+.. .....+++.+++.+.++.++|+.. +++.+.+++....+++.+.+.+++.++... ...|.
T Consensus 272 g~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~ 351 (423)
T TIGR00713 272 GAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGS 351 (423)
T ss_pred eeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeecc
Confidence 999999999888763 223357788999999988888742 236777788888888888888888776653 33455
Q ss_pred EEE-eeecCCCC------CCCH---HHHHHHHHHhcCeEEECC
Q 013883 398 YFV-VVDHTPFG------HETD---IAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 398 ~~~-~~~~~~~~------~~~~---~~~~~~Ll~~~GV~v~pG 430 (434)
++. ++...+.. ..+. ..+++.|++ +||.+.++
T Consensus 352 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~ 393 (423)
T TIGR00713 352 MFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPS 393 (423)
T ss_pred EEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecC
Confidence 443 34321110 0011 257777776 59998765
No 161
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.92 E-value=2.5e-23 Score=205.26 Aligned_cols=225 Identities=18% Similarity=0.246 Sum_probs=172.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhH----HHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY----EATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~ 223 (434)
..+|++.++++.+ .+ ..++++|+++++..++ .++++||+|++++|.|+.. ...+...|++++.++.
T Consensus 54 ~~~le~~la~l~g--------~~-~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 54 RGVLEQAIADLEG--------GD-QGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred HHHHHHHHHHHhC--------CC-cEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence 4678888888876 23 3466777789998765 5789999999999999874 3445568999988865
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
. |++.+++++++++++|++++|+||+|. ..++++|+++|++||+++|+|++|...... . ++ ..
T Consensus 124 ~------d~~~l~~~i~~~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~~~~-~--p~-----~~ 186 (366)
T PRK08247 124 A------SLKAIEQAITPNTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTPVLQ-R--PL-----EE 186 (366)
T ss_pred C------CHHHHHHhcccCceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcccccc-C--ch-----hc
Confidence 3 789999999999999999999999874 568999999999999999999999542221 1 11 12
Q ss_pred CceEEEccCChhhcc-ccceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSL-TGWKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~-~G~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+..+++.|+||.++- .+.+.|+++++ +++.+.++..+.......+.+.++++...|+. +....++++++++.+.
T Consensus 187 g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t----l~~r~~~~~~~a~~l~ 262 (366)
T PRK08247 187 GADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKT----LALRMRQHEENAKAIA 262 (366)
T ss_pred CCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCc----HHHHHHHHHHHHHHHH
Confidence 456999999999962 24589999997 67888887777666667777777777776663 3444556789999999
Q ss_pred HHhhhC-CCE-e-ecCCeeEEEeeec
Q 013883 382 EGLNAV-GFK-V-FPSSGTYFVVVDH 404 (434)
Q Consensus 382 ~~L~~~-g~~-~-~~~~~~~~~~~~~ 404 (434)
+.|++. ++. + .|+.|++|.| .+
T Consensus 263 ~~L~~~p~v~~v~~P~~gg~~sf-~~ 287 (366)
T PRK08247 263 AFLNEQPGVTDVLYPGRGGMLSF-RL 287 (366)
T ss_pred HHHHhCCCeeEEecCCcCcEEEE-EE
Confidence 999986 665 3 4558999988 44
No 162
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.92 E-value=7.8e-23 Score=202.42 Aligned_cols=265 Identities=17% Similarity=0.151 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhH--HHHHHHcCCEEEEEEcCCC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY--EATLSMAGAKIKCITLRPP 226 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~ 226 (434)
.++|+.+++++ |.+-+.+ .|++++|+++++..++.++..+||.|++..+.|++. ...++..|++++.++.++
T Consensus 40 ~~~~~~l~~l~----~~~~~~~-~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~- 113 (368)
T PRK13479 40 ASVRAKLVAIA----TGEEGYT-CVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGE- 113 (368)
T ss_pred HHHHHHHHHHh----CCCCCce-EEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCC-
Confidence 34555555554 4322223 688999999999999999999999999998888776 477888999999999874
Q ss_pred CCCCCHHHHHhhccc--CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCC
Q 013883 227 DFAIPIEELKSTISK--NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYE 304 (434)
Q Consensus 227 ~~~~d~~~l~~~i~~--~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~ 304 (434)
++.+|++.+++++++ ++++|++++|+||||...+ +++|.++|+++|+++|+|+++ .+ +.....+... +
T Consensus 114 ~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~~livDa~~-~~--g~~~~~~~~~----~ 183 (368)
T PRK13479 114 DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHGKRLIVDAMS-SF--GAIPIDIAEL----G 183 (368)
T ss_pred CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcCCEEEEEccc-cc--CCcccccccc----C
Confidence 567899999999865 4568889999999999986 567888999999999999554 33 2222222222 2
Q ss_pred ceEEEccCChhh-ccccceeeeEEeChhhHHHHHHHhh-----------------ccccCCchHHHHHHHHHHhCC--hH
Q 013883 305 RTVTMNSLGKTF-SLTGWKIGWAIAPPHLTWGVRQAHS-----------------FLTFATSTPMQWAATAALRAP--ET 364 (434)
Q Consensus 305 ~~i~i~S~SK~~-g~~G~R~G~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~~q~a~~~~L~~~--~~ 364 (434)
..+++.|++|.+ |.+| +||+++++++++.+..... ...++++.+.+.++..+++.. +.
T Consensus 184 ~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~ 261 (368)
T PRK13479 184 IDALISSANKCIEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEG 261 (368)
T ss_pred ceEEEecCccccccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence 336778999976 6667 7999999988877654321 112466666666666666542 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCEeecCC---eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 365 YYEELKRDYSAKKAILVEGLNAVGFKVFPSS---GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
++++.++++.++++.+++.|+++|+.+..+. .+....+.+......+..++.++|.++ ||.+.+|..
T Consensus 262 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-gi~v~~g~~ 331 (368)
T PRK13479 262 GVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQ-GFVIYPGKL 331 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHC-CEEEecCCC
Confidence 4677788999999999999999998865332 111122222211111466888888655 999999854
No 163
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=7.1e-23 Score=203.83 Aligned_cols=296 Identities=15% Similarity=0.114 Sum_probs=202.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CC---CCC----CCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG-KN---QYA----RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~---~Y~----~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
..|||.-=...-+.++.+.+++.+..... .. .+. ....+.++|+.++++++ .+ ++++++|+++
T Consensus 19 ~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~-~~~~~~g~t~ 89 (387)
T PRK09331 19 EFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MD-EARVTHGARE 89 (387)
T ss_pred cccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CC-cEEEeCCHHH
Confidence 45676544444556777888888776331 11 111 11135678888888876 24 5788999999
Q ss_pred HHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC-CCCCCCCHHHHHhhccc-------CCcEEEecCCCC
Q 013883 182 AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR-PPDFAIPIEELKSTISK-------NTRAILMNTPHN 253 (434)
Q Consensus 182 ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~-------~~~~i~~~~p~N 253 (434)
++..++.+++++||+|+++.+.|......+...|++++.++.+ ++++.+|++.+++++++ ++++|++++|+|
T Consensus 90 a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~ 169 (387)
T PRK09331 90 GKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDG 169 (387)
T ss_pred HHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCC
Confidence 9999999999999999999999998888889999999999984 23678999999998863 689999999999
Q ss_pred CcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhH
Q 013883 254 PTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLT 333 (434)
Q Consensus 254 PTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~ 333 (434)
|||... ++++|+++|+++|+++|+|++|..... ...... .+..+++.|++|.++ .+.|+||++++++++
T Consensus 170 ~tG~~~---~l~~I~~la~~~g~~livD~a~~~g~~---~~~~~~----~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i 238 (387)
T PRK09331 170 NYGNLA---DAKKVAKVAHEYGIPFLLNGAYTVGRM---PVDGKK----LGADFIVGSGHKSMA-ASAPSGVLATTEEYA 238 (387)
T ss_pred CCcccc---cHHHHHHHHHHcCCEEEEECCcccCCc---CCCHHH----cCCCEEEeeCccccc-CCCCEEEEEECHHHH
Confidence 999876 477799999999999999999985321 111111 134588999999998 566899999999988
Q ss_pred HHHHHHhhcc--------ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeec---CCeeEEEe
Q 013883 334 WGVRQAHSFL--------TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFP---SSGTYFVV 401 (434)
Q Consensus 334 ~~l~~~~~~~--------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~~~~~~~~ 401 (434)
+.+....... ..+.......++...|+...+.++ ..++..++.+.+++.|+++ |+++.. ...+ ++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~-i~~ 316 (387)
T PRK09331 239 DKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVK-RWDEEVKKARWFVDELEKIEGFKQLGEKPRNHD-LMK 316 (387)
T ss_pred hhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCC-eEE
Confidence 8765432211 111222223333334433222232 3344566777889999998 998873 3333 333
Q ss_pred eecCCC------CCCCHHHHHHHHHHhcCeEEE
Q 013883 402 VDHTPF------GHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 402 ~~~~~~------~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
++.+.. ...+..++.++|. ++||...
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~L~-~~gI~~~ 348 (387)
T PRK09331 317 FETPSFDEIAKKHKRRGFFLYEELK-KRGIHGI 348 (387)
T ss_pred EeCCchhHHhhhccccchhHHHHHH-HcCceEE
Confidence 443211 1112356888885 4599954
No 164
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=7.3e-23 Score=203.01 Aligned_cols=284 Identities=18% Similarity=0.162 Sum_probs=198.5
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCC----------CCcHHHHHHHHHHHHhhcCCCCC-CCCcEEEcCChHHHHHHHHHHcc
Q 013883 123 GPDFVKDAAIQAIRDGKNQYARG----------HGVPEFNSAIASRFKKDSGLEVD-PEKEVTVTSGCTEAIAATILGLI 191 (434)
Q Consensus 123 ~~~~v~~~~~~~~~~~~~~Y~~~----------~G~~~lr~~ia~~l~~~~g~~~~-~~~~i~~t~G~~~ai~~~~~~l~ 191 (434)
+++.+.+++.+.+.+. ..++.. ....++|+.++++++ .+ ++ ++++++|+++++.+++.++.
T Consensus 11 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~-~v~~~~g~t~a~~~~~~~l~ 82 (373)
T cd06453 11 KPQPVIDAIVDYYRHY-NANVHRGVHELSARATDAYEAAREKVARFIN------APSPD-EIIFTRNTTEAINLVAYGLG 82 (373)
T ss_pred CCHHHHHHHHHHHHhc-CCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCC-eEEEeCCHHHHHHHHHHHhh
Confidence 3566777777776442 111100 123456777777665 33 45 89999999999999999998
Q ss_pred C---CCCeEEEcCCCchhH----HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHH
Q 013883 192 N---PGDEVILFAPFYDSY----EATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 192 ~---~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
. +||+|+++++.|+.. ....+..|++++.++.+. ++.+|++.+++++.+++++|++++|+||||.+.+ +
T Consensus 83 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~ 158 (373)
T cd06453 83 RANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDD-DGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---V 158 (373)
T ss_pred hcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCC-CCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---H
Confidence 7 899999999999874 334557899999999874 6789999999999989999999999999999986 4
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhc--
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSF-- 342 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~-- 342 (434)
++|+++|++||+++|+|++|..... ...+... +..+++.|+.|.++. .++||+++++++++.++.....
T Consensus 159 ~~i~~~~~~~~~~li~D~a~~~~~~---~~~~~~~----~~d~~~~s~~K~~~~--~g~g~~~~~~~~~~~~~~~~~g~~ 229 (373)
T cd06453 159 KEIGEIAHEAGVPVLVDGAQSAGHM---PVDVQDL----GCDFLAFSGHKMLGP--TGIGVLYGKEELLEEMPPYGGGGE 229 (373)
T ss_pred HHHHHHHHHcCCEEEEEhhhhcCce---eeecccc----CCCEEEeccccccCC--CCcEEEEEchHHhhcCCCeecCCC
Confidence 5688889999999999999874321 1111111 234667788899984 5689999999888766543210
Q ss_pred -------------------cccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecC---CeeE
Q 013883 343 -------------------LTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAV-GFKVFPS---SGTY 398 (434)
Q Consensus 343 -------------------~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~---~~~~ 398 (434)
...+++.....++..+++.. +..+++++++.+++++++.+.|+++ |+++..+ .+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 309 (373)
T cd06453 230 MIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGV 309 (373)
T ss_pred ccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCe
Confidence 01123333444444444432 1235677788888899999999887 6777632 3444
Q ss_pred EEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 399 FVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+ ++.+.. .+..++.++|.+ +||.+.+|..
T Consensus 310 ~-~~~~~~---~~~~~i~~~l~~-~gi~i~~g~~ 338 (373)
T cd06453 310 V-SFNLEG---IHPHDVATILDQ-YGIAVRAGHH 338 (373)
T ss_pred E-EEEECC---cCHHHHHHHHHH-CCEEeccCcc
Confidence 3 444422 246678887754 6999988754
No 165
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.92 E-value=8e-23 Score=203.25 Aligned_cols=298 Identities=13% Similarity=0.130 Sum_probs=202.1
Q ss_pred eEeCCC-CCCCCCcHHHHHHHHHHHHc-------CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 112 INLGQG-FPNFDGPDFVKDAAIQAIRD-------GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 112 i~l~~g-~p~~~~~~~v~~~~~~~~~~-------~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+||+.. |.++..+|.+++++.+++++ .-..|+...+..+|+++++++++. ++ .+++++|.++..
T Consensus 1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~-------e~-al~~~sG~~a~~ 72 (392)
T PLN03227 1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT-------ES-AILYSDGASTTS 72 (392)
T ss_pred CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC-------Cc-EEEecCcHHHHH
Confidence 366654 88888999999999999876 122366666778899999998872 23 677888866555
Q ss_pred HHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc-----------cCCcEEEecCCC
Q 013883 184 AATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS-----------KNTRAILMNTPH 252 (434)
Q Consensus 184 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-----------~~~~~i~~~~p~ 252 (434)
.++.+++++||.|+++++.|.++...+...+++++.++..+ . -|++.+.+.+. +++++|++.+++
T Consensus 73 -~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d--~-~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~ 148 (392)
T PLN03227 73 -STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHND--M-KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLY 148 (392)
T ss_pred -HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCC--H-HHHHHHHHHhhhhccccccccCCCcEEEEEcCCc
Confidence 67778999999999999999999988888888887776542 1 13344443442 257889999999
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccC---CCCCCCceEEEccCChhhccccceeeeEEeC
Q 013883 253 NPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIAS---LPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~---~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
||+|.+++ +++|.++|++||+++|+||+|....++........ +....+..+++.|+||.+| ++.|+++++
T Consensus 149 ~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~~ 222 (392)
T PLN03227 149 KNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTVGS 222 (392)
T ss_pred CCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEEecC
Confidence 99999997 66789999999999999999972222211111111 1112345788999999876 456999999
Q ss_pred hhhHHHHHHHhhccccCCc--hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeec----------CCee
Q 013883 330 PHLTWGVRQAHSFLTFATS--TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFP----------SSGT 397 (434)
Q Consensus 330 ~~~~~~l~~~~~~~~~~~~--~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~----------~~~~ 397 (434)
+++++.++......+++.+ +..+.++..++....+ .++++++++++.+++++.|++.+++.+. ...+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~ 301 (392)
T PLN03227 223 EEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA-GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPIS 301 (392)
T ss_pred HHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCC
Confidence 9988777655444455554 4456666666654221 2456778888999999999865443221 1123
Q ss_pred EEEeeecCCCCCC-------CHHHHHHHHHHhcCeEEEC
Q 013883 398 YFVVVDHTPFGHE-------TDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 398 ~~~~~~~~~~~~~-------~~~~~~~~Ll~~~GV~v~p 429 (434)
.++.+.+.+.... ...+++++++++ ||.+.+
T Consensus 302 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gi~~~~ 339 (392)
T PLN03227 302 PIIYLRLSDQEATRRTDETLILDQIAHHSLSE-GVAVVS 339 (392)
T ss_pred CEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHC-CCEEEe
Confidence 3444444221000 013677777665 999864
No 166
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.92 E-value=9.5e-23 Score=205.12 Aligned_cols=300 Identities=18% Similarity=0.136 Sum_probs=197.0
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCC------CCCC-CCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGK------NQYA-RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~------~~Y~-~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.|+|..+... .++.+++++...+.... ..|. ...-...+.+...+.+.+.+|. +.. +|++++| +++
T Consensus 26 ~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~i~~~sg-t~a 99 (416)
T PRK00011 26 EHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--EYA-NVQPHSG-SQA 99 (416)
T ss_pred cCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--Cce-eeecCCc-hHH
Confidence 67888876432 57778887766543210 0111 1111222333223355555554 334 5766665 779
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHH-----HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcc
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEA-----TLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTG 256 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~-----~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG 256 (434)
+..++.+++++||+|+++.|+|..+.. .+...|++++.++++++++.+|++.+++++++ ++++|+++.++|+
T Consensus 100 l~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~~-- 177 (416)
T PRK00011 100 NAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAYS-- 177 (416)
T ss_pred HHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCcCC--
Confidence 999999999999999999999976432 12345678888888755688999999999975 7899988766554
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCCc-cccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYDK-LAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTW 334 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~~-~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~ 334 (434)
... ++++|.++|+++|+++|+|++|.. +.+.+..... +. ...+++.|++|.+ +|+|.||++++ +++++
T Consensus 178 ~~~---~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~--~~---~~di~~~S~~K~l--~g~~gg~i~~~~~~~~~ 247 (416)
T PRK00011 178 RPI---DFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSP--VP---HADVVTTTTHKTL--RGPRGGLILTNDEELAK 247 (416)
T ss_pred Ccc---CHHHHHHHHHHcCCEEEEECcchhcccccCccCCC--CC---CCcEEEecCCcCC--CCCCceEEEeCCHHHHH
Confidence 333 477899999999999999999753 2222211111 11 2347799999976 68999999996 68888
Q ss_pred HHHHHhhccccCCchH-HHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecC-CeeEEEeeecCCCCCCC
Q 013883 335 GVRQAHSFLTFATSTP-MQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPS-SGTYFVVVDHTPFGHET 411 (434)
Q Consensus 335 ~l~~~~~~~~~~~~~~-~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~ 411 (434)
+++.......++.+.. .+.++..++.. .++++++.+++++++++.+++.|++.|+++.+. ..++++|+.+.+.+. +
T Consensus 248 ~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~-~ 326 (416)
T PRK00011 248 KINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVVSGGTDNHLVLVDLRSKGL-T 326 (416)
T ss_pred HHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeeeecCCCCeEEEEeCcccCC-C
Confidence 8877665443333332 23332223322 234567888999999999999999999887641 223677887744332 3
Q ss_pred HHHHHHHHHHhcCeEEEC
Q 013883 412 DIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~p 429 (434)
..++.+.| +++||.+..
T Consensus 327 ~~~~~~~L-~~~GI~v~~ 343 (416)
T PRK00011 327 GKEAEAAL-EEANITVNK 343 (416)
T ss_pred HHHHHHHH-HHcCcEEcc
Confidence 55666655 566999974
No 167
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.91 E-value=3.8e-23 Score=202.80 Aligned_cols=276 Identities=16% Similarity=0.143 Sum_probs=202.2
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccC-----------
Q 013883 124 PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLIN----------- 192 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~----------- 192 (434)
+..+.+.+...+......|....+..++++++++++.+..|.+.+++ ++++|+|+++++..++.++..
T Consensus 12 ~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~ 90 (345)
T cd06450 12 PALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDA-DGVFTSGGSESNLLALLAARDRARKRLKAGGG 90 (345)
T ss_pred HHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCC-CEEEeCChhHHHHHHHHHHHHHhhhhhhcccc
Confidence 34555555555554445688888899999999999999888764445 799999999999999888742
Q ss_pred -CC--CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcEEEecCCCCCcccCCCHHH
Q 013883 193 -PG--DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRAILMNTPHNPTGKMFTREE 263 (434)
Q Consensus 193 -~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~i~~~~p~NPTG~~~~~e~ 263 (434)
++ +.|+++++.|..+...+...|.+++.++.++ ++.+|++.+++++++ +++++++++|+||||.+. +
T Consensus 91 ~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~---~ 166 (345)
T cd06450 91 RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAID---P 166 (345)
T ss_pred cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCC---C
Confidence 33 4788899999999999888999999999875 468999999999987 788888999999999985 5
Q ss_pred HHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc
Q 013883 264 LNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 343 (434)
Q Consensus 264 l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~ 343 (434)
+++|+++|+++|+++++|++|..+.+........ .....+-..+..|++|.++ ++.++|+++.+
T Consensus 167 ~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~-------------- 230 (345)
T cd06450 167 LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHL-DFGIERVDSISVDPHKYGL-VPLGCSAVLVR-------------- 230 (345)
T ss_pred HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHH-hcCccccCEEEEchhHhhC-CCcchHHHHHH--------------
Confidence 7889999999999999999998876432111110 1111122356679999876 66788987654
Q ss_pred ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEee-cCCeeEEEeeecCCC---CCCCHHHHHHH
Q 013883 344 TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVF-PSSGTYFVVVDHTPF---GHETDIAFCEY 418 (434)
Q Consensus 344 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~ 418 (434)
...+.++...+. .+.+++.+++..++++++.+.|+++ ++.+. +++.+++.|. +.+. +. +..++.++
T Consensus 231 -----~~~~~~~l~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~-~~~~~~~~~-~~~~i~~~ 301 (345)
T cd06450 231 -----ALKLWATLRRFG--RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFR-LKPSVKLDE-LNYDLSDR 301 (345)
T ss_pred -----HHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEE-ECCcchhhH-HHHHHHHH
Confidence 444455555554 3456778888888999999999887 67665 3567766554 3221 11 34578888
Q ss_pred HHHhcCeEEECC
Q 013883 419 LIKEVGVVAIPT 430 (434)
Q Consensus 419 Ll~~~GV~v~pG 430 (434)
|.++ |+.+.++
T Consensus 302 L~~~-g~~~~~~ 312 (345)
T cd06450 302 LNER-GGWHVPA 312 (345)
T ss_pred HHhc-CCEEEEe
Confidence 8655 6655554
No 168
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.91 E-value=7e-23 Score=206.14 Aligned_cols=316 Identities=10% Similarity=0.063 Sum_probs=205.9
Q ss_pred CCeeEeCCCCCCCC---CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFPNFD---GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p~~~---~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...+||..|+...+ .++.+.+++.+++.+..+.+.+..+.++ ..++++.+....+.+.. + .+++++++++|++.
T Consensus 41 ~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~-~~~la~~l~~~~~~~~~-~-~~~f~~sGsea~e~ 117 (425)
T PRK08088 41 REYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEP-YLELCEKMNQKVPGDFA-K-KTLLVTTGSEAVEN 117 (425)
T ss_pred CEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHH-HHHHHHHHHHhCCCCCC-C-EEEEeCCcHHHHHH
Confidence 35788877754433 3788888999988764433333333343 44788888766554332 2 46666666787776
Q ss_pred HHHHcc--CCCCeEEEcCCCchhHHHHHHHcCCEEE--------------E--EEcCCCCCCC--CHHHHHhhcc-----
Q 013883 186 TILGLI--NPGDEVILFAPFYDSYEATLSMAGAKIK--------------C--ITLRPPDFAI--PIEELKSTIS----- 240 (434)
Q Consensus 186 ~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~~~~--------------~--v~~~~~~~~~--d~~~l~~~i~----- 240 (434)
+++... ..+..|+..+++|++....+...+.... . +|.+..+... +++.+++.+.
T Consensus 118 Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~ 197 (425)
T PRK08088 118 AVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAP 197 (425)
T ss_pred HHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCC
Confidence 665542 2234577779999998766655543211 1 1111111111 1556887775
Q ss_pred cCCcEEEecC-CCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccc
Q 013883 241 KNTRAILMNT-PHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 241 ~~~~~i~~~~-p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
++..+|++.. .+|++...++.+.+++|.++|++||+++|+||+|.++.+.+....+... +.+..+.||||.++ +
T Consensus 198 ~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~----~~~pdi~s~sK~l~-~ 272 (425)
T PRK08088 198 EDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQM----GVAADLTTFAKSIA-G 272 (425)
T ss_pred CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhc----CCCCCEEEEecccc-C
Confidence 2445555543 2777777889999999999999999999999999987665433222222 22344899999999 9
Q ss_pred cceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCee
Q 013883 320 GWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGT 397 (434)
Q Consensus 320 G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 397 (434)
|+|+||+++++++++.+.......+++.+++.|.++..+|+.. ++++++++...+++++.+.+.+.+.+........|
T Consensus 273 G~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G 352 (425)
T PRK08088 273 GFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLG 352 (425)
T ss_pred CCcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccc
Confidence 9999999999999988876666678889999999999999863 34566666665666666665555554321122227
Q ss_pred EEEeeecCCCC------CCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 398 YFVVVDHTPFG------HETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 398 ~~~~~~~~~~~------~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+++|+.+.... .....++..++++ .||.+.|+..|
T Consensus 353 ~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~-~Gv~~~~~~~~ 393 (425)
T PRK08088 353 AMIAIELFEDGDHSKPNAKLTAQIVARARD-KGLILLSCGPY 393 (425)
T ss_pred eEEEEEEecCCCCCCCCHHHHHHHHHHHHh-CCCEEecCCCC
Confidence 77888873211 1124567777765 49999886543
No 169
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.91 E-value=6.6e-23 Score=201.80 Aligned_cols=289 Identities=17% Similarity=0.152 Sum_probs=197.2
Q ss_pred CCcHHHHHHHHHHHHcCCC---CCCCCCC------cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc-
Q 013883 122 DGPDFVKDAAIQAIRDGKN---QYARGHG------VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI- 191 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~~---~Y~~~~G------~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~- 191 (434)
+.++.+.+++.+.+..... ......+ +.++|+.++++++ .+++ +|++++|+++++..++.++.
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~-~v~~~~g~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALG------ADTE-EVIFTSGATESNNLAILGLAR 81 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhC------CCCC-eEEEeCCHHHHHHHHHHHHHH
Confidence 4567788888777654211 1111111 2456666666654 5566 89999999999999888875
Q ss_pred ---CCC-CeEEEcCCCchhH---HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHH
Q 013883 192 ---NPG-DEVILFAPFYDSY---EATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 192 ---~~g-d~Vlv~~p~y~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
.+| +.|++....|+.+ ...++..|++++.++.++ ++.+|++.+++++++++++|++++++||||.+.+ +
T Consensus 82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~ 157 (353)
T TIGR03235 82 AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE-SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---I 157 (353)
T ss_pred hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC-CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---H
Confidence 356 7788876666654 344566799999999874 6789999999999889999999999999999986 5
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHH--HHH---
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV--RQA--- 339 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l--~~~--- 339 (434)
++|.++|+++|+++|+|+++..... ...+. ..+-.+++.|..|.+|.+| +|+++++++..... +..
T Consensus 158 ~~I~~l~~~~~~~~ivD~a~~~g~~---~~~~~----~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~ 228 (353)
T TIGR03235 158 REIAEVLEAHEAFFHVDAAQVVGKI---TVDLS----ADRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFG 228 (353)
T ss_pred HHHHHHHHHcCCEEEEEchhhcCCc---ccccc----ccCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeC
Confidence 7799999999999999999775322 11111 1234477778899887556 89999988753221 110
Q ss_pred ----hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCC-eeEEEeeecCCCCCCCHHH
Q 013883 340 ----HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSS-GTYFVVVDHTPFGHETDIA 414 (434)
Q Consensus 340 ----~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~ 414 (434)
.+....+++.....++..+|+...+..++.+++++++++.+++.|++.|+++..+. .....++.+...+. +..+
T Consensus 229 ~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~~ 307 (353)
T TIGR03235 229 GGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSIDGV-NSEA 307 (353)
T ss_pred CCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeCCc-CHHH
Confidence 01123345555555566666543345677889999999999999988999886432 22111222211232 4566
Q ss_pred HHHHHHHhcCeEEECCCCC
Q 013883 415 FCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 415 ~~~~Ll~~~GV~v~pG~~F 433 (434)
+...| ++ ||.+.+|..|
T Consensus 308 v~~~L-~~-~i~v~~g~~~ 324 (353)
T TIGR03235 308 LIVNL-RA-DAAVSTGSAC 324 (353)
T ss_pred HHHHH-hC-CeEEEchhhc
Confidence 76666 55 9999999876
No 170
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.91 E-value=6e-23 Score=205.55 Aligned_cols=297 Identities=18% Similarity=0.226 Sum_probs=201.9
Q ss_pred CCeeEeCCCCCCCCC---cHHHHHHHHHHHHcCCCCC--CCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 109 HGAINLGQGFPNFDG---PDFVKDAAIQAIRDGKNQY--ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~---~~~v~~~~~~~~~~~~~~Y--~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
...+||..|+-.... +|.+.+++.+++....... .......+|.+.++++ .+ .+ .+++++++++|+
T Consensus 41 ~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~----~~-~~~~~~SGs~A~ 111 (401)
T PRK00854 41 NRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAAL----TG----SH-KVLPMNSGAEAV 111 (401)
T ss_pred CEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhh----CC----CC-EEEEeCCcHHHH
Confidence 357888777554443 7888999988887632211 1111223444444443 33 24 689999999999
Q ss_pred HHHHHHccC---------CC-CeEEEcCCCchhHHHHHHHcCC-------------EEEEEEcCCCCCCCCHHHHHhhcc
Q 013883 184 AATILGLIN---------PG-DEVILFAPFYDSYEATLSMAGA-------------KIKCITLRPPDFAIPIEELKSTIS 240 (434)
Q Consensus 184 ~~~~~~l~~---------~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~d~~~l~~~i~ 240 (434)
..++..+.. +| ++|++..-.|++....+...+. ++..++. .|++.+++++.
T Consensus 112 e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~le~~i~ 185 (401)
T PRK00854 112 ETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF------GDAEALEAAIT 185 (401)
T ss_pred HHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC------CCHHHHHHHhC
Confidence 999988742 23 6788888888775443333222 1222221 37899999998
Q ss_pred cCCcEEEecCCCCCcccCCCH-HHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccc
Q 013883 241 KNTRAILMNTPHNPTGKMFTR-EELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 241 ~~~~~i~~~~p~NPTG~~~~~-e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
+++++|++++|+||+|.+++. +.+++|.++|++||+++|+||+|.++.+.+...........+|.+ .++|.++ .
T Consensus 186 ~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~----~~~K~l~-g 260 (401)
T PRK00854 186 PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVT----LIGKALS-G 260 (401)
T ss_pred CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEE----Eeccccc-C
Confidence 899999999999999998874 459999999999999999999999876654322111111122322 2479997 4
Q ss_pred c-ceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEe---ecCC
Q 013883 320 G-WKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKV---FPSS 395 (434)
Q Consensus 320 G-~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~---~~~~ 395 (434)
| +|+||+++++++++.+.......+++.+++.+.++.++|+..++ +.+.++++++.+++.+.|++++... ..+.
T Consensus 261 g~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~ 338 (401)
T PRK00854 261 GFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE--EGMIENAAEMGAYFLEGLRSIRSNIVREVRGR 338 (401)
T ss_pred CccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHhhccCceEEEecc
Confidence 5 79999999999988776544555777888999999999875322 3356788888899999998875332 2445
Q ss_pred eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 396 GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
|.++.+. +.+.. .+..++++.|+++ ||.+.+.
T Consensus 339 g~~~~i~-~~~~~-~~~~~~~~~L~~~-GV~v~~~ 370 (401)
T PRK00854 339 GLMLAVE-LEPEA-GGARQYCEALKER-GLLAKDT 370 (401)
T ss_pred ceEEEEE-EecCc-hhHHHHHHHHHHC-CeEEecC
Confidence 6655543 22211 2467888888765 9999863
No 171
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=2.6e-22 Score=199.13 Aligned_cols=301 Identities=16% Similarity=0.162 Sum_probs=213.2
Q ss_pred CCeeEeCCC--CCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 109 HGAINLGQG--FPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 109 ~~~i~l~~g--~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
...|||..| +-.+...|.+.+++.+++.... .+.. .-..++++++++.+.. .++..+++++++++++..+
T Consensus 29 ~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~-~~~~-~~~~~~~~~la~~l~~------~~~~~~~~~~SGseA~~~A 100 (375)
T PRK04260 29 KKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIW-HSPN-LYLNSLQEEVAQKLIG------DKDYLAFFCNSGAEANEAA 100 (375)
T ss_pred CEEEECCCCcccccCCCCHHHHHHHHHHHHhcC-cccC-ccCCHHHHHHHHHHhc------CcCCEEEEcCccHHHHHHH
Confidence 357898765 4455567789999998887532 2222 2345788889987752 1222468899999999988
Q ss_pred HHHcc--CCCCeEEEcCCCchhHH-HHHHHcCCEEE---------EEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCC
Q 013883 187 ILGLI--NPGDEVILFAPFYDSYE-ATLSMAGAKIK---------CITLRPPDFAIPIEELKSTISKNTRAILMNTPHNP 254 (434)
Q Consensus 187 ~~~l~--~~gd~Vlv~~p~y~~~~-~~~~~~G~~~~---------~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NP 254 (434)
++... .++++|++.+..|++.. ..+...|.+.. .++.. ...|++.+++.+.+++.+|++..++|+
T Consensus 101 l~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~dl~~l~~~l~~~~a~vi~e~v~~~ 177 (375)
T PRK04260 101 IKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA---IFNDLNSVKALVNKNTAAVMLELVQGE 177 (375)
T ss_pred HHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe---CCCCHHHHHHhcCCCeEEEEECCeECC
Confidence 87653 44678999889888643 33333332211 11111 113899999988777888899999999
Q ss_pred cccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhH
Q 013883 255 TGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLT 333 (434)
Q Consensus 255 TG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~ 333 (434)
+|... +.+.+++|.++|+++|+++|+||+|.++...+...........+| +.||||.++ +|+|+||+++++++.
T Consensus 178 ~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd----i~t~sK~l~-~G~~ig~~~~~~~~~ 252 (375)
T PRK04260 178 SGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD----IFTLAKGLA-NGVPVGAMLAKSSLG 252 (375)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC----EEEeccccc-CCcceEEEEEcHHHH
Confidence 99975 456799999999999999999999998766554332222222233 448999999 899999999999988
Q ss_pred HHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCC-CEeecCCeeEEEeeecCCCCCC
Q 013883 334 WGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVG-FKVFPSSGTYFVVVDHTPFGHE 410 (434)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~ 410 (434)
+.+.......+++.+++.+.++.++|+.. +++++++++..+..++.+.+.+.+.+ +..++ ..|+++|+.+..
T Consensus 253 ~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~---- 327 (375)
T PRK04260 253 GAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVR-GLGYMIGIETTA---- 327 (375)
T ss_pred hhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe-ccceEEEEEecC----
Confidence 87765445567888899999999999653 35677778888888888888877664 33333 367788887632
Q ss_pred CHHHHHHHHHHhcCeEEECCC
Q 013883 411 TDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 411 ~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+..++.++|.+ +||.+.|+.
T Consensus 328 ~~~~~~~~l~~-~Gi~v~~~~ 347 (375)
T PRK04260 328 DLSQLVEAARD-KGLIVLTAG 347 (375)
T ss_pred cHHHHHHHHHh-CCCEEecCC
Confidence 46678888865 599998753
No 172
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.91 E-value=1.3e-22 Score=203.04 Aligned_cols=305 Identities=14% Similarity=0.113 Sum_probs=204.2
Q ss_pred CCeeEeCCC----CCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 109 HGAINLGQG----FPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 109 ~~~i~l~~g----~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
...+||..| +-++. +|.+.+++.+++.+..+ +.... ..+...++++.+.+..+ .+ .+++++++++|+.
T Consensus 39 ~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~-~~~~~-~~~~~~~la~~l~~~~~----~~-~v~~~~sGseA~e 110 (406)
T PRK12381 39 KEYIDFAGGIAVNALGHA-HPALREALNEQASKFWH-TGNGY-TNEPVLRLAKKLIDATF----AD-RVFFCNSGAEANE 110 (406)
T ss_pred CEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhccc-ccCcc-CCHHHHHHHHHHHhhCC----CC-eEEEcCCcHHHHH
Confidence 357888765 23344 78899999998875321 11111 12333445555554332 34 7999999999999
Q ss_pred HHHHHcc--------CCCCeEEEcCCCchhHHHHHHHcCCEEE-E---EEcCCC---CCCCCHHHHHhhcccCCcEEEec
Q 013883 185 ATILGLI--------NPGDEVILFAPFYDSYEATLSMAGAKIK-C---ITLRPP---DFAIPIEELKSTISKNTRAILMN 249 (434)
Q Consensus 185 ~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~G~~~~-~---v~~~~~---~~~~d~~~l~~~i~~~~~~i~~~ 249 (434)
.+++... ..+++|+..+..|++.......++.... . .++.+. -...|++.+++.+.+++++|++
T Consensus 111 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavii- 189 (406)
T PRK12381 111 AALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIV- 189 (406)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEE-
Confidence 9988752 2346799999999987654433332211 0 011000 0123789999999877878877
Q ss_pred CCCCCcccCC--CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEE
Q 013883 250 TPHNPTGKMF--TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAI 327 (434)
Q Consensus 250 ~p~NPTG~~~--~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~ 327 (434)
.|.|++|-+. +.+.+++|.++|++||+++|+||+|.++.+.|.......+...+| +.||||.+| +|+|+||++
T Consensus 190 EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pD----i~t~sK~l~-gG~~ig~~~ 264 (406)
T PRK12381 190 EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD----VLTTAKALG-GGFPIGAML 264 (406)
T ss_pred eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCC----EEEehhhhh-CCCceEEEE
Confidence 6999998654 789999999999999999999999998876665433222222233 469999999 899999999
Q ss_pred eChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC--CE--eecCCeeEEEeee
Q 013883 328 APPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG--FK--VFPSSGTYFVVVD 403 (434)
Q Consensus 328 ~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~--~~~~~~~~~~~~~ 403 (434)
+++++++.+.......+++.+++.+.++.++|+..+ .++++++++++.+++.+.|++++ .. ......|+++++.
T Consensus 265 ~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~ 342 (406)
T PRK12381 265 TTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN--TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCV 342 (406)
T ss_pred EcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEE
Confidence 999998887654555677888999999988876422 23567888888888988888763 21 1223345666666
Q ss_pred cCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 404 HTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 404 ~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+.+........+++.|++ +||.+.++
T Consensus 343 l~~~~~~~~~~~~~~l~~-~Gv~v~~~ 368 (406)
T PRK12381 343 LNAEYAGKAKQISQEAAK-AGVMVLIA 368 (406)
T ss_pred ecCchhhHHHHHHHHHHH-CCcEEeeC
Confidence 533111124566666654 59999863
No 173
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.91 E-value=3.5e-22 Score=198.79 Aligned_cols=289 Identities=18% Similarity=0.152 Sum_probs=202.9
Q ss_pred CcHHHHHHHHHHHHcCC------CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc-----
Q 013883 123 GPDFVKDAAIQAIRDGK------NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI----- 191 (434)
Q Consensus 123 ~~~~v~~~~~~~~~~~~------~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~----- 191 (434)
.++.+.+++.+.+.+.. +.|+ ..+...+++++++++.. .+. .+++ +|++|+|+++++..++.++.
T Consensus 11 ~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~-~~~-~~~~-~i~~t~g~teal~~~~~~~~~~~~~ 86 (382)
T TIGR03403 11 LDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKG-INA-RDLD-DIIITSCATESNNWVLKGVYFDEIL 86 (382)
T ss_pred CCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHH-cCc-CCCC-eEEEeCCHHHHHHHHHHHHHHhhcc
Confidence 45678888877776421 1122 12456788888887753 232 2466 89999999999999988762
Q ss_pred CC-CCeEEEcCCCchhHH---HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 192 NP-GDEVILFAPFYDSYE---ATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 192 ~~-gd~Vlv~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
++ +|+|++....|+.+. ..++..|++++.+|.++ ++.+|++.++++++++++++++++|+||||.+++. ++|
T Consensus 87 ~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~-~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~---~~I 162 (382)
T TIGR03403 87 KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE-QGTITAEQVREAITEKTALVSVMWANNETGMIFPI---KEI 162 (382)
T ss_pred cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC-CCCCCHHHHHHhcccCCeEEEEEcccCCCccccCH---HHH
Confidence 45 478998876665544 44567899999999874 57889999999999899999999999999999975 568
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhH--HHH---HHHhhc
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLT--WGV---RQAHSF 342 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~--~~l---~~~~~~ 342 (434)
.++|+++|+++|+|+++.... ....+. . .+-.+++.|++|.+|.+| +|+++.++... ..+ ......
T Consensus 163 ~~la~~~g~~~ivD~a~~~g~---~~~~~~---~-~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~ 233 (382)
T TIGR03403 163 GEICKERGVLFHTDAVQAIGK---IPVDVQ---K-AGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGR 233 (382)
T ss_pred HHHHHHcCCEEEEechhhcCC---CccCcc---c-cCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCc
Confidence 888999999999999976421 111111 1 123378889999888777 68887764431 001 001112
Q ss_pred cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCC----eeEEEeeecCCCCCCCHHHHHH
Q 013883 343 LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSS----GTYFVVVDHTPFGHETDIAFCE 417 (434)
Q Consensus 343 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 417 (434)
...+++.+.+.++..+|+...++++..++++++.++.+.+.|+++ |+.+..+. .++ +.+.+. +. +..++..
T Consensus 234 ~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~--~~-~~~~~~~ 309 (382)
T TIGR03403 234 RSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNT-ILISIK--GV-EGEAMLW 309 (382)
T ss_pred ccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCE-EEEEeC--CC-CHHHHHH
Confidence 245677778878888887655567777889999999999999875 77777543 233 333332 22 4667777
Q ss_pred HHHHhcCeEEECCCCC
Q 013883 418 YLIKEVGVVAIPTSVF 433 (434)
Q Consensus 418 ~Ll~~~GV~v~pG~~F 433 (434)
+| +++||.+..|+.|
T Consensus 310 ~L-~~~gI~v~~g~~c 324 (382)
T TIGR03403 310 DL-NKAGIAASTGSAC 324 (382)
T ss_pred hh-ccCCEEEEchhcc
Confidence 76 5669999988643
No 174
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.91 E-value=6.2e-22 Score=196.54 Aligned_cols=299 Identities=17% Similarity=0.177 Sum_probs=202.9
Q ss_pred eCCCCCCCCCcHHHHHHHHHHHHcCC--CC---CCC----CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 114 LGQGFPNFDGPDFVKDAAIQAIRDGK--NQ---YAR----GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 114 l~~g~p~~~~~~~v~~~~~~~~~~~~--~~---Y~~----~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
|..+...+++|+.+.+++.+.+.+.. .. |.. ..++.++|+.++++++ .+ +++ +|++++|+++++.
T Consensus 3 ld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~-~~~-~v~~~~g~t~al~ 76 (376)
T TIGR01977 3 FDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFN----AP-SSA-HVVFTNNATTALN 76 (376)
T ss_pred ccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhC----cC-CCC-eEEEeCCHHHHHH
Confidence 44444456777888888888876532 12 222 1345577777777775 21 233 7999999999999
Q ss_pred HHHHHccCCCCeEEEcCCCchhHHH----HHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCC
Q 013883 185 ATILGLINPGDEVILFAPFYDSYEA----TLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFT 260 (434)
Q Consensus 185 ~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~ 260 (434)
.++.+++++||+|++..+.|..+.. +.+..|.+++.++.++ ++.+|++.++++++++++++++++|+||||.+++
T Consensus 77 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~ 155 (376)
T TIGR01977 77 IALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN-EGLISPERIKRAIKTNTKLIVVSHASNVTGTILP 155 (376)
T ss_pred HHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC-CCCcCHHHHHHhcCCCCeEEEEECCCCCccccCC
Confidence 9999999999999999999887643 4455699999998874 6778999999999889999999999999999997
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhh-HHHHHH-
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL-TWGVRQ- 338 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~-~~~l~~- 338 (434)
. ++|.++|+++|+++|+|+++...... ..+. ..+-.+++.|..|.++.|. ..|.++..++. +..+..
T Consensus 156 ~---~~i~~l~~~~~~~livD~a~~~g~~~---~~~~----~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~ 224 (376)
T TIGR01977 156 I---EEIGELAQENGIFFILDAAQTAGVIP---IDMT----ELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSG 224 (376)
T ss_pred H---HHHHHHHHHcCCEEEEEhhhccCccC---CCch----hcCCCEEEecccccccCCC-CceEEEEcCCcCcCceecC
Confidence 4 56888899999999999999753321 1111 1234478899999885332 36777665543 111100
Q ss_pred ---------------HhhccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCC----ee
Q 013883 339 ---------------AHSFLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSS----GT 397 (434)
Q Consensus 339 ---------------~~~~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~~ 397 (434)
..++...+.+.+...++..+|+.. +...+.++++.+++.+.+.+.|++. |+.+..+. ..
T Consensus 225 ~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 304 (376)
T TIGR01977 225 GTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRV 304 (376)
T ss_pred CCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccC
Confidence 001112234444455555555432 1234566778888888999988864 67776431 12
Q ss_pred EEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 398 YFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
..+++.+. +. +..++...|.+++||.+.+|..|
T Consensus 305 ~~v~~~~~--~~-~~~~~~~~L~~~~gi~v~~g~~~ 337 (376)
T TIGR01977 305 GVVSFTVE--GI-DSEEVADILDEKFDIATRTGLHC 337 (376)
T ss_pred CeEEEEEC--CC-CHHHHHHHHhccCCEEEEccccc
Confidence 24444442 22 46778888876669999988643
No 175
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.91 E-value=5.3e-22 Score=195.47 Aligned_cols=273 Identities=19% Similarity=0.197 Sum_probs=191.1
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCC-------
Q 013883 123 GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGD------- 195 (434)
Q Consensus 123 ~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd------- 195 (434)
+++.+.+++.++..+ |. +..++++++.+++.+.+|. + ++++++|+++++.+++.+++++||
T Consensus 25 ~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~----~-~~~~~~g~t~al~~al~al~~~Gd~~~~~~~ 92 (363)
T TIGR01437 25 VSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGV----E-DAVIVSSASAGIAQSVAAVITRGNRYLVENL 92 (363)
T ss_pred CCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCC----C-eEEEEcCHHHHHHHHHHHHhcCCCcchhhcc
Confidence 578888888888643 32 4568888888888877774 4 689999999999999999999998
Q ss_pred --------eEEEcCCCchhH----HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEE-ecCCCCCcccCCCHH
Q 013883 196 --------EVILFAPFYDSY----EATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAIL-MNTPHNPTGKMFTRE 262 (434)
Q Consensus 196 --------~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~-~~~p~NPTG~~~~~e 262 (434)
+|+++.|.|..| ..++...|++++.++.+ +.+|++.+++++++++++++ +++||||+|.+.+.
T Consensus 93 ~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~---~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~- 168 (363)
T TIGR01437 93 HDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA---NECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSV- 168 (363)
T ss_pred cccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC---CCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCH-
Confidence 999999888766 56778899999988763 56899999999999999876 57889999998865
Q ss_pred HHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhc
Q 013883 263 ELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSF 342 (434)
Q Consensus 263 ~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~ 342 (434)
++|+++|++||+++|+|++|..- ......+ +..+++.|++|.+ +|++.|++++++++++.++.....
T Consensus 169 --~~i~~~a~~~gi~vivD~a~~~~-----~~~~~~~----g~D~~~~S~~K~l--~gp~~G~l~~~~~~i~~~~~~~~~ 235 (363)
T TIGR01437 169 --EDAAQVAQEHNLPLIVDAAAEED-----LQKYYRL----GADLVIYSGAKAI--EGPTSGLVLGKKKYIEWVKLQSKG 235 (363)
T ss_pred --HHHHHHHHHcCCeEEEECCCCCc-----hHHHHHc----CCCEEEEeCCccc--CCCceEEEEEcHHHHHHHHhccCC
Confidence 55899999999999999999721 1111111 2347789999976 588999999998888776433211
Q ss_pred c--cc---CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecC--CeeE-----EEeeecCCCCC
Q 013883 343 L--TF---ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPS--SGTY-----FVVVDHTPFGH 409 (434)
Q Consensus 343 ~--~~---~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~-----~~~~~~~~~~~ 409 (434)
. .+ ..+..++.++...+.. +..+..+.+.++++.+.+.|+++ |+.+..+ ..+. -+.++....+.
T Consensus 236 ~~~~~~~~~~~~~gl~aAl~~~~~---~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~ 312 (363)
T TIGR01437 236 IGRAMKVGKENILGLTAALEQYLS---TGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGM 312 (363)
T ss_pred CcceeccCHHHHHHHHHHHHHHHc---cCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCC
Confidence 1 11 1112233333333332 12233444556677899999886 8877632 1111 12233222233
Q ss_pred CCHHHHHHHHHHhcC--eEEEC
Q 013883 410 ETDIAFCEYLIKEVG--VVAIP 429 (434)
Q Consensus 410 ~~~~~~~~~Ll~~~G--V~v~p 429 (434)
+..++.+.|.+ .| |.+++
T Consensus 313 -~~~~l~~~L~~-~~~~I~~r~ 332 (363)
T TIGR01437 313 -TAADVVQALRQ-GEPAIYTRG 332 (363)
T ss_pred -CHHHHHHHHhc-CCCCEEEee
Confidence 57789888854 35 77664
No 176
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=1.5e-21 Score=193.42 Aligned_cols=293 Identities=15% Similarity=0.138 Sum_probs=202.1
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccC----CCCeE
Q 013883 122 DGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLIN----PGDEV 197 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~----~gd~V 197 (434)
++.+.+.+++.+.+...........+..++.+.+.+.+.+..|. +++ ++++++|+++++..++..+.. +||+|
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~~-~~~~~~ggt~a~~~a~~~~~~~~~~~~~~v 107 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHL--PDA-YGYITSGGTEANIQAVRAARNLAKAEKPNI 107 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCC--CCC-CeEEecCcHHHHHHHHHHHHhhccCCCceE
Confidence 35567778887777652111111124455555666666666664 344 688899999999988877653 57999
Q ss_pred EEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcE
Q 013883 198 ILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVL 277 (434)
Q Consensus 198 lv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~ 277 (434)
++.++.|..+...++..|++++.+|.++ ++.+|++.++++++++++.|++++++|+||.+.+ +++|.++|+++|++
T Consensus 108 l~~~~~h~s~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g~~ 183 (371)
T PRK13520 108 VVPESAHFSFDKAADMLGVELRRAPLDD-DYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALENGIF 183 (371)
T ss_pred EecCcchHHHHHHHHHcCceEEEecCCC-CCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHcCCC
Confidence 9999999999999999999999999874 6788999999999988888888889999999986 66788889999999
Q ss_pred EEEcCcCCccccC--CCCccccCCCCCCCceEEEccCChhhccccceeeeEEe-ChhhHHHHHHHhhcc--------ccC
Q 013883 278 VFSDEVYDKLAFE--MDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSFL--------TFA 346 (434)
Q Consensus 278 iI~Deay~~~~~~--~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~-~~~~~~~l~~~~~~~--------~~~ 346 (434)
+++|++|..+... .....+ .+. ...-..+..|..| ++++|.++|+++. ++++++.+.....+. ..+
T Consensus 184 livD~a~~~~~~~~~~~~~~~-~~~-~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt 260 (371)
T PRK13520 184 LHVDAAFGGFVIPFLDDPPNF-DFS-LPGVDSITIDPHK-MGLAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGT 260 (371)
T ss_pred EEEEecchhHHHHhhcCCCCc-ccc-CCCCceEEECCcc-ccCccCCceEEEEcCHHHHHhhcccCccccCCCCcceEee
Confidence 9999999876532 111111 111 1112234457778 5557888998776 555666554211111 111
Q ss_pred CchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCE-eecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcC
Q 013883 347 TSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFK-VFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVG 424 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~G 424 (434)
.+.....++..+|+.. ++.+++.+++..++++.+.+.|+++|++ +..+..+++ .+.+. +..++..+|.++ |
T Consensus 261 ~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v-~~~~~-----~~~~v~~~L~~~-g 333 (371)
T PRK13520 261 RSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEPVLNIV-AFDDP-----NPDEVREKLRER-G 333 (371)
T ss_pred ccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCceEE-EEecC-----CHHHHHHHHHHC-C
Confidence 2334455566666542 3456778888999999999999988988 566666644 44442 367888888665 9
Q ss_pred eEEECCC
Q 013883 425 VVAIPTS 431 (434)
Q Consensus 425 V~v~pG~ 431 (434)
|.+.++.
T Consensus 334 i~v~~~~ 340 (371)
T PRK13520 334 WRVSVTR 340 (371)
T ss_pred ceeccCC
Confidence 9988753
No 177
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.90 E-value=1.3e-21 Score=193.32 Aligned_cols=193 Identities=23% Similarity=0.343 Sum_probs=148.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCCC
Q 013883 125 DFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-INPGDEVILFAPF 203 (434)
Q Consensus 125 ~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p~ 203 (434)
+...+++.+++..+.. + |..++++++.+++.+..| .+ ++++++|+++++.+++.++ ++|||+|++++++
T Consensus 11 ~~e~~a~~~~~~~~~~-~----~~g~~~~~~e~~la~~~g----~~-~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t 80 (376)
T TIGR02379 11 GQELEYIAEAISEGKL-S----GDGPFSRRCETWLENRTG----TK-KALLTPSCTAALEMAALLLDIQPGDEVIMPSYT 80 (376)
T ss_pred HHHHHHHHHHHHcCCc-c----CCcHHHHHHHHHHHHHhC----CC-eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCC
Confidence 4456777777766432 1 223556666666665544 34 7999999999999999887 8999999999999
Q ss_pred chhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCc
Q 013883 204 YDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEV 283 (434)
Q Consensus 204 y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Dea 283 (434)
|..+...+...|++++.++++++++.+|++.+++++++++++|+ |+||+|...+ +++|.++|++||++||+|++
T Consensus 81 ~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeDaa 154 (376)
T TIGR02379 81 FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIEDAA 154 (376)
T ss_pred cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEECc
Confidence 99999999999999999999977789999999999999999986 6778999874 66799999999999999999
Q ss_pred CCccc-cCCCCccccCCCCCCCceEEEccC--ChhhccccceeeeEEeC-hhhHHHHHHHhh
Q 013883 284 YDKLA-FEMDHISIASLPGMYERTVTMNSL--GKTFSLTGWKIGWAIAP-PHLTWGVRQAHS 341 (434)
Q Consensus 284 y~~~~-~~~~~~~~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~ 341 (434)
|..+. +++.. +..+ .+ +.+.|| +|.+. +|.+.|+++++ +++.++++.++.
T Consensus 155 ~~~g~~~~~~~--~g~~---~~--~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~ 208 (376)
T TIGR02379 155 QGVMSTYKGRA--LGSI---GH--LGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIRE 208 (376)
T ss_pred cccCCccCCcc--cCCC---CC--EEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHH
Confidence 98764 44322 2111 11 223333 38886 78789998886 788888877665
No 178
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.90 E-value=2.7e-22 Score=200.76 Aligned_cols=308 Identities=14% Similarity=0.110 Sum_probs=195.6
Q ss_pred CCeeEeCCCCCCCC---CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFPNFD---GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p~~~---~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...+||..|+-... .+|.+.+++.+++......... . ..+..+.+.+.+.+..+ .+ .+++++++++|+..
T Consensus 31 ~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~-~-~~~~~~~~~~~l~~~~~----~~-~~~~~~SGs~A~e~ 103 (400)
T PTZ00125 31 KKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRA-F-YNDVLGLAEKYITDLFG----YD-KVLPMNSGAEAGET 103 (400)
T ss_pred CEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccccc-c-cCHHHHHHHHHHHhCCC----CC-EEEEeCCcHHHHHH
Confidence 36789987755544 4788999998887653222111 1 12344455555554433 24 68888888999999
Q ss_pred HHHHcc----------CCCCeEEEcCCCchhHHHHH-HHcCCEEEEEEcCC--CC----CCCCHHHHHhhcc-cCCcEEE
Q 013883 186 TILGLI----------NPGDEVILFAPFYDSYEATL-SMAGAKIKCITLRP--PD----FAIPIEELKSTIS-KNTRAIL 247 (434)
Q Consensus 186 ~~~~l~----------~~gd~Vlv~~p~y~~~~~~~-~~~G~~~~~v~~~~--~~----~~~d~~~l~~~i~-~~~~~i~ 247 (434)
++..+. ..++.|++.+-.|++..... ...+.......+.+ .+ ...|++.+++.++ +++++|+
T Consensus 104 al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~ 183 (400)
T PTZ00125 104 ALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFI 183 (400)
T ss_pred HHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEE
Confidence 988663 13477888888887754333 22222111000000 00 1138999999996 5788999
Q ss_pred ecCCCCCcccCCC-HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeE
Q 013883 248 MNTPHNPTGKMFT-REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWA 326 (434)
Q Consensus 248 ~~~p~NPTG~~~~-~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~ 326 (434)
++.++||||.+++ .+.+++|.++|++||+++|+||+|.++.+.|...........+| +.++||.++.+++|+||+
T Consensus 184 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd----~~~~sK~l~~g~~~ig~v 259 (400)
T PTZ00125 184 VEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPD----IVLLGKALSGGLYPISAV 259 (400)
T ss_pred EcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCC----EEEEcccccCCCcCcEEE
Confidence 9888999999886 45599999999999999999999988766554322211111122 335789998444599999
Q ss_pred EeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh----CCCE-eecCCeeEEEe
Q 013883 327 IAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA----VGFK-VFPSSGTYFVV 401 (434)
Q Consensus 327 ~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~~~~~~~~~~ 401 (434)
++++++++.+.......+++.+++.+.++.++|+..++ +...++.+++.+.+++.|++ .++. ...+ .|.+.+
T Consensus 260 ~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-~g~~~~ 336 (400)
T PTZ00125 260 LANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKE--EKLAENAQRLGEVFRDGLKELLKKSPWVKEIRG-KGLLNA 336 (400)
T ss_pred EEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEec-ccEEEE
Confidence 99999988876555555778888888888777764211 12233444455555555544 3432 2344 445555
Q ss_pred eecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 402 VDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 402 ~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.+......+..+++++|++ +||.+.|+.
T Consensus 337 v~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~ 365 (400)
T PTZ00125 337 IVFDHSDGVNAWDLCLKLKE-NGLLAKPTH 365 (400)
T ss_pred EEEccCcchHHHHHHHHHHH-CCeEEeecC
Confidence 65532111245678888875 599999864
No 179
>PRK06460 hypothetical protein; Provisional
Probab=99.90 E-value=1.1e-21 Score=194.06 Aligned_cols=211 Identities=18% Similarity=0.197 Sum_probs=159.3
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCC----CchhHHHHHHHcCCEEEEEE
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAP----FYDSYEATLSMAGAKIKCIT 222 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p----~y~~~~~~~~~~G~~~~~v~ 222 (434)
...+|+++++++++ . +. .+++++| ++++..++.+++++||+|+++.| +|..+...++..|+++..++
T Consensus 46 ~~~~L~~~lA~l~g------~-~~-~v~~~sG-~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~ 116 (376)
T PRK06460 46 TVLELTKKIVELEN------A-EM-GVAFSSG-MGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASN 116 (376)
T ss_pred cHHHHHHHHHHHhC------C-Cc-EEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEEC
Confidence 56789999999886 2 22 4666555 78999999999999999999875 45556677888999988877
Q ss_pred cCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC
Q 013883 223 LRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM 302 (434)
Q Consensus 223 ~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~ 302 (434)
.+ +.+.+++.+++++++|++++|+||||.+++.+ +|+++|+++|+++|+||+|.... ....+ .
T Consensus 117 ~~------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~---~I~~la~~~g~~vivDea~~~~~------~~~~l--~ 179 (376)
T PRK06460 117 PG------SDNIIEKAKSKRYDVVFVENITNPLLRVVDIT---ELSKVCKENGSILIVDATFSTPI------NQKPL--E 179 (376)
T ss_pred CC------CHHHHHHhcCCCceEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcCccc------cCChh--h
Confidence 54 23445665667899999999999999999765 58888999999999999997532 11111 1
Q ss_pred CCceEEEccCChhhc-cccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 303 YERTVTMNSLGKTFS-LTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 303 ~~~~i~i~S~SK~~g-~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
.+.++++.|+||.++ ..|.|+||++++++++++++..+.....+.++. .+..+++. .++++...+++.++++.+.
T Consensus 180 ~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~~---~a~~~l~~-~~~l~~r~~~~~~n~~~l~ 255 (376)
T PRK06460 180 LGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLDPH---AAYLTLRG-IKTLKIRMDVINRNAEQIA 255 (376)
T ss_pred cCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCCHH---HHHHHHhc-hhhHHHHHHHHHHHHHHHH
Confidence 235689999999985 223679999999999998887776554444442 33344443 4578888889999999999
Q ss_pred HHhhhC
Q 013883 382 EGLNAV 387 (434)
Q Consensus 382 ~~L~~~ 387 (434)
+.|++.
T Consensus 256 ~~L~~~ 261 (376)
T PRK06460 256 EFLEGH 261 (376)
T ss_pred HHHHcC
Confidence 999875
No 180
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=3.2e-21 Score=191.26 Aligned_cols=276 Identities=18% Similarity=0.173 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCCC
Q 013883 125 DFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-INPGDEVILFAPF 203 (434)
Q Consensus 125 ~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p~ 203 (434)
+...+++.+.+..+...+.+ ...+|+++++++++ .+ ++++++|+++|+.+++.++ +++||+|++++|+
T Consensus 14 ~~e~~~~~~~l~~~~~~~g~--~~~~le~~la~~~g--------~~-~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~ 82 (379)
T PRK11658 14 DEELAAVKEVLRSGWITTGP--KNQALEQAFCQLTG--------NQ-HAIAVSSATAGMHITLMALGIGPGDEVITPSLT 82 (379)
T ss_pred HHHHHHHHHHHHcCCccCCH--hHHHHHHHHHHHhC--------CC-eEEEECCHHHHHHHHHHHcCCCCCCEEEECCCc
Confidence 44466777777765443333 46899999999987 34 6788899999999999999 8999999999999
Q ss_pred chhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCc
Q 013883 204 YDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEV 283 (434)
Q Consensus 204 y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Dea 283 (434)
|..+...+...|++++.++++++++.+|++.+++++++++++|+ |+|++|... ++++|.++|++||+++|+|++
T Consensus 83 ~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~---d~~~i~~~a~~~gi~vi~D~a 156 (379)
T PRK11658 83 WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAII---PVHYAGAPA---DLDAIRAIGERYGIPVIEDAA 156 (379)
T ss_pred HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEE---EeCCCCCcC---CHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999876788999999999999999887 667899877 467799999999999999999
Q ss_pred CCc-cccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhhcccc----------------
Q 013883 284 YDK-LAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLTF---------------- 345 (434)
Q Consensus 284 y~~-~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~~---------------- 345 (434)
|.. ..+.+.. +. .. . +.+.||++...+++.+.|+++.+ +++.++++..+.....
T Consensus 157 ~a~g~~~~~~~--~g---~~-g--~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 228 (379)
T PRK11658 157 HAVGTYYKGRH--IG---AR-G--TAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAE 228 (379)
T ss_pred CccCCeECCee--cC---CC-C--CEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcce
Confidence 984 3333321 11 11 1 24567775555567788988875 7787777765432110
Q ss_pred ----CC-chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCE-eecC----CeeEEEe-eecCC--CCCCCH
Q 013883 346 ----AT-STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFK-VFPS----SGTYFVV-VDHTP--FGHETD 412 (434)
Q Consensus 346 ----~~-~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~----~~~~~~~-~~~~~--~~~~~~ 412 (434)
+. ..+....++..+.. .+.+++..++.++..+.+.+.|.++++. +..+ ...++.+ +.+.. .+. +.
T Consensus 229 ~~~~G~n~~~~~l~AAl~~~q-l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r 306 (379)
T PRK11658 229 VLTPGYKYNLADINAAIALVQ-LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGI-SR 306 (379)
T ss_pred eeccccccCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccC-CH
Confidence 00 00111111111111 2345666666667777777888776533 2222 1222222 22221 122 46
Q ss_pred HHHHHHHHHhcCeEEE
Q 013883 413 IAFCEYLIKEVGVVAI 428 (434)
Q Consensus 413 ~~~~~~Ll~~~GV~v~ 428 (434)
.++.++|. ++||.+.
T Consensus 307 ~~~~~~L~-~~gI~~~ 321 (379)
T PRK11658 307 DALMEALK-ERGIGTG 321 (379)
T ss_pred HHHHHHHH-HCCCCCc
Confidence 67888885 4598754
No 181
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.90 E-value=2.3e-21 Score=192.74 Aligned_cols=283 Identities=19% Similarity=0.139 Sum_probs=193.3
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCCCCC---------cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc-
Q 013883 122 DGPDFVKDAAIQAIRDGKNQYARGHG---------VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI- 191 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~~~Y~~~~G---------~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~- 191 (434)
+.++.+.+++.+.+.+. ..++.... +.++|+.++++++ .+++ +|++++|+++++..++..+.
T Consensus 10 ~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~-~i~~t~~~t~a~~~al~~~~~ 81 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEY-FGNPSSMHSFGGEVGKAVEEAREQVAKLLG------AEPD-EIIFTSGGTESDNTAIKSALA 81 (379)
T ss_pred CCCHHHHHHHHHHHHhc-CCCCCcccHHHHHHHHHHHHHHHHHHHHhC------CCCC-eEEEeCcHHHHHHHHHHHHHH
Confidence 34567888887776542 22222111 2344555555554 4466 89999999999999888764
Q ss_pred --CCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 192 --NPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 192 --~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
.+||+|++....|+.+... +...|++++.+|.++ ++.+|++.++++++++++++++++++||||.+++. ++
T Consensus 82 ~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~---~~ 157 (379)
T TIGR03402 82 AQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE-EGRLDLEELRAAITDDTALVSVMWANNETGTIFPI---EE 157 (379)
T ss_pred hcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC-CCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccH---HH
Confidence 4568899988888776543 445699999999864 57799999999999999999999999999999975 56
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHH-------
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA------- 339 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~------- 339 (434)
|.++|+++|+++|+|+++.... ....+.. .+-.+++.|..|.+|.+| +|+++.+++.. +...
T Consensus 158 I~~l~~~~g~~vivD~~~~~g~---~~~~~~~----~~~D~~~~s~~K~~gp~G--~g~l~v~~~~~--~~p~~~g~~~~ 226 (379)
T TIGR03402 158 IGEIAKERGALFHTDAVQAVGK---IPIDLKE----MNIDMLSLSGHKLHGPKG--VGALYIRKGTR--FRPLLRGGHQE 226 (379)
T ss_pred HHHHHHHcCCEEEEECcccccc---cccCccc----CCCCEEEEcHHHcCCCCc--eEEEEECCCCC--CCCcccCCccC
Confidence 8899999999999999997421 1122221 123466778889777556 88888876541 1100
Q ss_pred hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh-C-CCEeecCC-----eeEEEeeecCCCCCCCH
Q 013883 340 HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA-V-GFKVFPSS-----GTYFVVVDHTPFGHETD 412 (434)
Q Consensus 340 ~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~-----~~~~~~~~~~~~~~~~~ 412 (434)
......+++.+...++..+++...+++++..+++++.++.+++.|++ + ++.+..+. +...+++.. . ++
T Consensus 227 ~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~ 301 (379)
T TIGR03402 227 RGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEY----I-EG 301 (379)
T ss_pred CCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecC----C-CH
Confidence 01123345555566666666654556777788889999999999875 4 66665432 223334332 1 46
Q ss_pred HHHHHHHHHhcCeEEECCCCC
Q 013883 413 IAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 413 ~~~~~~Ll~~~GV~v~pG~~F 433 (434)
.+++..| +++||.+.+|..|
T Consensus 302 ~~~~~~l-~~~gI~v~~g~~c 321 (379)
T TIGR03402 302 EAILLLL-DMEGICASSGSAC 321 (379)
T ss_pred HHHHHhh-ccCCEEEEchhhc
Confidence 6787766 5679999998754
No 182
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.90 E-value=5.7e-21 Score=189.44 Aligned_cols=290 Identities=15% Similarity=0.164 Sum_probs=193.4
Q ss_pred CcHHHHHHHHHHHHcC--CCC-CCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc------CC
Q 013883 123 GPDFVKDAAIQAIRDG--KNQ-YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI------NP 193 (434)
Q Consensus 123 ~~~~v~~~~~~~~~~~--~~~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~------~~ 193 (434)
+.+.+.+++....... ... | .|..++.+.+.+.+.+..|. +++ ++++++|+++++..++.++. ++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~la~~~g~--~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 105 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLF---PGTKKIEEEVVGSLGNLLHL--PDA-YGYIVSGGTEANIQAVRAAKNLAREEKR 105 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccC---ccHHHHHHHHHHHHHHHhCC--CCC-CeEEeccHHHHHHHHHHHHHHHHhccCC
Confidence 4445566665554432 112 2 13344445555555555554 344 68889999999888776653 46
Q ss_pred CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHH
Q 013883 194 GDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE 273 (434)
Q Consensus 194 gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~ 273 (434)
||+|+++++.|..+...++..|++++.++.++ ++.+|++.++++++++++.+++.+|+||||...+ +++|.++|++
T Consensus 106 g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~ 181 (373)
T TIGR03812 106 TPNIIVPESAHFSFEKAAEMLGLELRYAPLDE-DYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALE 181 (373)
T ss_pred CcEEEECCcchHHHHHHHHHcCCeEEEEeeCC-CCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHH
Confidence 79999999999999999999999999999874 6789999999999888766666668999999875 6668889999
Q ss_pred cCcEEEEcCcCCccccCCCC--ccccCCC-CCCCceEEEccCChhhccccceeeeEE-eChhhHHHHHHHhhccc-----
Q 013883 274 NDVLVFSDEVYDKLAFEMDH--ISIASLP-GMYERTVTMNSLGKTFSLTGWKIGWAI-APPHLTWGVRQAHSFLT----- 344 (434)
Q Consensus 274 ~~~~iI~Deay~~~~~~~~~--~~~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~~~-~~~~~~~~l~~~~~~~~----- 344 (434)
+|+++|+|++|..+...-.. .....+. ....-..+..|..| +++++.|.|+++ .++++++.++....+..
T Consensus 182 ~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~ 260 (373)
T TIGR03812 182 NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQA 260 (373)
T ss_pred cCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCc
Confidence 99999999999865421000 0000000 00011234456779 666778888665 57777766642111111
Q ss_pred ---cCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCE-eecCCeeEEEeeecCCCCCCCHHHHHHHH
Q 013883 345 ---FATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFK-VFPSSGTYFVVVDHTPFGHETDIAFCEYL 419 (434)
Q Consensus 345 ---~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 419 (434)
.+.+.....++..+|+. .++.+++..+++.++++++++.|+++|+. +.++..+ ++.+.+. +..++.++|
T Consensus 261 ~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~v~~~~~-----~~~~v~~~L 334 (373)
T TIGR03812 261 TITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEPVLN-IVAFEVD-----DPEEVRKKL 334 (373)
T ss_pred ceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCCce-EEEEEeC-----CHHHHHHHH
Confidence 12234455566666664 24567788899999999999999999875 4444555 3444442 245788888
Q ss_pred HHhcCeEEECC
Q 013883 420 IKEVGVVAIPT 430 (434)
Q Consensus 420 l~~~GV~v~pG 430 (434)
.++ ||.+.++
T Consensus 335 ~~~-gi~v~~~ 344 (373)
T TIGR03812 335 RDR-GWYVSVT 344 (373)
T ss_pred HHC-CceeccC
Confidence 655 9999875
No 183
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.90 E-value=1.6e-21 Score=194.73 Aligned_cols=299 Identities=17% Similarity=0.170 Sum_probs=199.9
Q ss_pred cCCeeEeCCC----CCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 108 KHGAINLGQG----FPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 108 ~~~~i~l~~g----~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+...|||..| +-++ .+|.+.+++.+++++... ...... .+...++++.+.+..+ .+ .+++++++++|+
T Consensus 34 G~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~-~~~~~~-~~~~~~la~~L~~~~~----~~-~~~f~~SGseA~ 105 (397)
T TIGR03246 34 GKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWH-IGNGYT-NEPVLRLAKKLVDATF----AD-KVFFCNSGAEAN 105 (397)
T ss_pred CCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhccc-ccCccC-CHHHHHHHHHHHhhCC----CC-EEEEeCCcHHHH
Confidence 3467898775 2344 478899999988876321 111111 2344555666554433 34 799999999999
Q ss_pred HHHHHHcc-------CC-CCeEEEcCCCchhHHH-HHHHcCCE------------EEEEEcCCCCCCCCHHHHHhhcccC
Q 013883 184 AATILGLI-------NP-GDEVILFAPFYDSYEA-TLSMAGAK------------IKCITLRPPDFAIPIEELKSTISKN 242 (434)
Q Consensus 184 ~~~~~~l~-------~~-gd~Vlv~~p~y~~~~~-~~~~~G~~------------~~~v~~~~~~~~~d~~~l~~~i~~~ 242 (434)
..+++... .+ .++|+..+-.|++... .+...+.. +..+|+ .|++.+++.+.++
T Consensus 106 e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~ 179 (397)
T TIGR03246 106 EAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY------NDLAAAKALISDK 179 (397)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC------CCHHHHHHHhccC
Confidence 99988652 12 3567777777777543 33333321 122222 2789999999888
Q ss_pred CcEEEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccc
Q 013883 243 TRAILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGW 321 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~ 321 (434)
+++|+++.++++.|+.+ +.+.+++|.++|++||+++|+||+|.++.+.|.......+.-.+| +.+++|.+| .|+
T Consensus 180 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pD----i~t~~K~lg-gG~ 254 (397)
T TIGR03246 180 TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD----ILTSAKALG-GGF 254 (397)
T ss_pred eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCC----EEEeehhhh-CCc
Confidence 88888886666677654 789999999999999999999999988866554333222222222 448999998 899
Q ss_pred eeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC-----CEeecCCe
Q 013883 322 KIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG-----FKVFPSSG 396 (434)
Q Consensus 322 R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~ 396 (434)
|+||+++++++++.+.......+++.+++.+.++.++|+..+ .+++.++++++.+++++.|++++ +..+...|
T Consensus 255 pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G 332 (397)
T TIGR03246 255 PIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN--TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKG 332 (397)
T ss_pred ceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCc
Confidence 999999999998877654444567788888888888887532 13567788888888888887764 22233444
Q ss_pred eEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 397 TYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
.++ .+.+.+........+++.|+++ ||.+.+
T Consensus 333 ~~~-~i~~~~~~~~~~~~~~~~l~~~-Gv~~~~ 363 (397)
T TIGR03246 333 LLI-GAVLTEAYQGKAKQFVNAAAEE-GVIALI 363 (397)
T ss_pred eEE-EEEEcCchhhHHHHHHHHHHHC-CeEEee
Confidence 443 3333211011356788888765 999876
No 184
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.89 E-value=9.9e-22 Score=195.17 Aligned_cols=210 Identities=20% Similarity=0.256 Sum_probs=159.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH----HHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA----TLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~~ 223 (434)
..+|++.++++++ .+ ++++++|+++|+..++.+++++||+|+++.+.|.+... .+...|++++.++.
T Consensus 63 ~~~le~~la~l~g--------~~-~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 63 VTMFQERLAALEG--------AE-ACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHhC--------CC-cEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 4567788877765 34 68888999999999999999999999999998876543 45678999998876
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
+ |++.+++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....... ++ . .
T Consensus 134 ~------d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~---pl-~----~ 196 (390)
T PRK08133 134 T------DLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ---PL-K----L 196 (390)
T ss_pred C------CHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC---ch-h----h
Confidence 4 689999999999999999999999999984 6789999999999999999986543221 11 1 1
Q ss_pred CceEEEccCChhhcccccee-eeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTGWKI-GWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVE 382 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~-G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~ 382 (434)
+..+++.|++|.++.+|.++ ||+++++++++.+...........+...++ .+++..+ .+....+++.++...+.+
T Consensus 197 g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~---~~l~gl~-tl~~R~~~~~~~a~~la~ 272 (390)
T PRK08133 197 GADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAW---VFLKGLE-TLSLRMEAHSANALALAE 272 (390)
T ss_pred CCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHH---HHHcccc-hHHHHHHHHHHHHHHHHH
Confidence 23478999999998789887 677788887777665554433344444333 3344322 455556677778888888
Q ss_pred HhhhC
Q 013883 383 GLNAV 387 (434)
Q Consensus 383 ~L~~~ 387 (434)
.|++.
T Consensus 273 ~L~~~ 277 (390)
T PRK08133 273 WLEAH 277 (390)
T ss_pred HHHhC
Confidence 88875
No 185
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.89 E-value=8.4e-21 Score=188.12 Aligned_cols=276 Identities=21% Similarity=0.268 Sum_probs=186.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCCCch
Q 013883 127 VKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-INPGDEVILFAPFYD 205 (434)
Q Consensus 127 v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p~y~ 205 (434)
..+++.+.+..+. .| |..++++++++++.+..|. + ++++++|+++++.+++.++ +++||+|+++.|+|.
T Consensus 13 ~~~~~~~~l~~~~-~~----g~~~~~~~~e~~la~~~g~----~-~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~ 82 (375)
T PRK11706 13 ELDYIQQAMSSGK-LC----GDGGFTRRCQQWLEQRFGS----A-KVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFV 82 (375)
T ss_pred HHHHHHHHHHcCC-cc----CCCHHHHHHHHHHHHHhCC----C-eEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcH
Confidence 3556667666542 22 2345677777777666553 4 7999999999999887766 799999999999999
Q ss_pred hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCC
Q 013883 206 SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYD 285 (434)
Q Consensus 206 ~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~ 285 (434)
.+...+...|++++.++++++++.+|++.+++++++++++|+++ |++|... ++++|.++|++||++||+|++|.
T Consensus 83 ~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~i~~~---~~~G~~~---~~~~i~~la~~~~i~vIeD~a~a 156 (375)
T PRK11706 83 STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPV---HYAGVAC---EMDTIMALAKKHNLFVVEDAAQG 156 (375)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCCCeEEEEe---CCCCCcc---CHHHHHHHHHHcCCEEEEECccc
Confidence 99999999999999999987778899999999999899999865 4699776 46779999999999999999998
Q ss_pred ccc-cCCCCccccCCCCCCCceEEEccCC--hhhccccceeeeEEeChhhHHHHHHHhhcc-----------------cc
Q 013883 286 KLA-FEMDHISIASLPGMYERTVTMNSLG--KTFSLTGWKIGWAIAPPHLTWGVRQAHSFL-----------------TF 345 (434)
Q Consensus 286 ~~~-~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~~~~~~~~~~~l~~~~~~~-----------------~~ 345 (434)
.+. +++. .+..+. .+.+.||. |.++ +|.+.++++.++++.++++.++... ..
T Consensus 157 ~g~~~~~~--~~g~~~-----~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 228 (375)
T PRK11706 157 VMSTYKGR--ALGTIG-----HIGCFSFHETKNYT-AGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDI 228 (375)
T ss_pred cccccCCe--eeecCc-----CEEEEeCCCCcccc-ccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeec
Confidence 775 3332 222221 13344544 9998 6888888888889988877766421 01
Q ss_pred CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC----CEee--cCC---eeEEEeeecCCCCCCCHHHHH
Q 013883 346 ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG----FKVF--PSS---GTYFVVVDHTPFGHETDIAFC 416 (434)
Q Consensus 346 ~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~ 416 (434)
+.+.......++.+....+.+++..++.+++.+.+.+.|.++. +... ++. ..++.++.+.+ + .+..++.
T Consensus 229 g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~r~~l~ 306 (375)
T PRK11706 229 GSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRD-L-EDRSALI 306 (375)
T ss_pred ccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECC-c-CCHHHHH
Confidence 2222112122222211122355555555666667777776642 2321 211 12234454432 2 2466788
Q ss_pred HHHHHhcCeEEEC
Q 013883 417 EYLIKEVGVVAIP 429 (434)
Q Consensus 417 ~~Ll~~~GV~v~p 429 (434)
+.|.+ +||.+..
T Consensus 307 ~~L~~-~gI~~~~ 318 (375)
T PRK11706 307 NFLKE-AGIMAVF 318 (375)
T ss_pred HHHHH-CCCCccc
Confidence 87765 5998753
No 186
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=6.4e-21 Score=185.32 Aligned_cols=297 Identities=19% Similarity=0.220 Sum_probs=221.2
Q ss_pred cCCeeEeCCC-CCCCCCcHHHHHHHHHHHHcC-C--C----CCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCCh
Q 013883 108 KHGAINLGQG-FPNFDGPDFVKDAAIQAIRDG-K--N----QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGC 179 (434)
Q Consensus 108 ~~~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~-~--~----~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~ 179 (434)
+..++||+.+ |.++...|.+.+++.+++++- . . -++...-+.+|.+.+|+|++ .++.+++++|
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g--------~e~al~f~SG- 108 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG--------AEAALLFSSG- 108 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC--------CCcEEEEccc-
Confidence 3468999887 899999999999999998872 1 1 12222234567777777776 4424555555
Q ss_pred HHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcEEEecCCCC
Q 013883 180 TEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRAILMNTPHN 253 (434)
Q Consensus 180 ~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~i~~~~p~N 253 (434)
..++..++.++++++|.|+...-.|.+..+.++..+++++.+... |++.||+.+.+ +.+.|+....-.
T Consensus 109 y~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~Hn------D~~~Le~~l~~~~~~~~~~~~IvtegVfS 182 (388)
T COG0156 109 FVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHN------DLDHLEALLEEARENGARRKLIVTEGVFS 182 (388)
T ss_pred chhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecCC------CHHHHHHHHHhhhccCCCceEEEEecccc
Confidence 888888999999999999999999999999999999999988754 78999999866 246667777888
Q ss_pred CcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC--CCceEEEccCChhhccccceeeeEEeChh
Q 013883 254 PTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM--YERTVTMNSLGKTFSLTGWKIGWAIAPPH 331 (434)
Q Consensus 254 PTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~~~~~~~ 331 (434)
..|.+.| +++|++++++|+.++++||+|+...+++....+....+. .+..|.++||||.||..| ||+.++..
T Consensus 183 MdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~ 256 (388)
T COG0156 183 MDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAA 256 (388)
T ss_pred CCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHH
Confidence 8998875 666999999999999999999998888655544422222 345899999999999777 99999999
Q ss_pred hHHHHHHHhhccccCC--chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCC
Q 013883 332 LTWGVRQAHSFLTFAT--STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGH 409 (434)
Q Consensus 332 ~~~~l~~~~~~~~~~~--~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 409 (434)
+++.+....+...|+. ++....++..+|+..+ .....+++++++...+++.++..|+.+.+.......++ +. +.
T Consensus 257 ~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~-~~~~~r~~L~~~~~~~~~~~~~~~~~~~~s~s~I~pv~-~g--d~ 332 (388)
T COG0156 257 LIDYLRNRARPFIFSTALPPAVAAAALAALRILE-EGPERRERLQELAAFFRSLLKALGLVLLPSESPIIPVI-LG--DE 332 (388)
T ss_pred HHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCCccCCCCCCeeeeE-eC--CH
Confidence 9999987655554443 3334445566666532 23456788888888888777777888755555544322 21 11
Q ss_pred CCHHHHHHHHHHhcCeEEECC
Q 013883 410 ETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 410 ~~~~~~~~~Ll~~~GV~v~pG 430 (434)
....++...|+++ ||++.+-
T Consensus 333 ~~a~~~s~~l~~~-Gi~v~~i 352 (388)
T COG0156 333 ERALEASRALLEE-GIYVSAI 352 (388)
T ss_pred HHHHHHHHHHHHC-CeeEeee
Confidence 2366788888887 9999764
No 187
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.89 E-value=5.3e-21 Score=189.94 Aligned_cols=251 Identities=19% Similarity=0.210 Sum_probs=172.4
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH----HcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS----MAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~v~~ 223 (434)
..+|++.++++++ .+..+++++| +.++..++.+++++||+|+++.|.|......+. ..|+++..++.
T Consensus 63 ~~~Le~~lA~l~G--------~~~al~~~sG-~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~ 133 (386)
T PRK06767 63 VKLFEERMAVLEG--------GEEALAFGSG-MAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM 133 (386)
T ss_pred hHHHHHHHHHHhC--------CCcEEEECCH-HHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence 5788999888876 2324555555 679999999999999999999998887655543 34555554433
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
.|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+. .++. .
T Consensus 134 ------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~---~pl~-----~ 196 (386)
T PRK06767 134 ------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ---RPLE-----L 196 (386)
T ss_pred ------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC---Cchh-----c
Confidence 3789999999989999999999999999986 567888899999999999999643322 1111 1
Q ss_pred CceEEEccCChhhcccccee-eeEEeChhhHHHHHH-HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTGWKI-GWAIAPPHLTWGVRQ-AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~-G~~~~~~~~~~~l~~-~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+..+++.|++|.++.+|.|+ ||++++++.++++.. .+.......+++.++++...|+. +....++..++...+.
T Consensus 197 g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t----l~~r~~~~~~~a~~la 272 (386)
T PRK06767 197 GCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT----LAVRMDRHCDNAEKIV 272 (386)
T ss_pred CCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHHHH
Confidence 23478889999998788885 899999888877543 33222233344444444444432 3445677788888999
Q ss_pred HHhhhC-CCEe-e-c----------CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 382 EGLNAV-GFKV-F-P----------SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 382 ~~L~~~-g~~~-~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.|++. ++.. . | ..||++.| .+.. +.++..+|.++| +..++.+.=|.
T Consensus 273 ~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf-~l~~-~~~~~~~f~~~l-~~~~~~~s~G~ 332 (386)
T PRK06767 273 SFLKNHDAVEGVWYPEGELASRQMKRGGGVISF-SIKG-GKEETQAFINDL-HFITIAVSLGD 332 (386)
T ss_pred HHHHcCCCccEEECCCcHHHHHhCCCCCceEEE-EEcC-CHHHHHHHHHhC-CccEEecCCCC
Confidence 999886 5552 2 1 23555544 3421 222345677766 45566666554
No 188
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=6.1e-21 Score=189.69 Aligned_cols=210 Identities=18% Similarity=0.207 Sum_probs=160.2
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH----HHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA----TLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~~ 223 (434)
..+|++.++++++ .+ ..++++++++|+..++.+++++||+|+++.|.|.+... .+...|++++.++.
T Consensus 66 ~~~le~~lA~l~g--------~~-~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 136 (398)
T PRK08249 66 VQAFEEKVRILEG--------AE-AATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET 136 (398)
T ss_pred HHHHHHHHHHHhC--------CC-eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC
Confidence 4678888888876 33 45666666899999999999999999999999997644 34567888876643
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
.|++.+++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+... . .+. .
T Consensus 137 ------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~-~--~l~-----~ 199 (398)
T PRK08249 137 ------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ-N--PLA-----L 199 (398)
T ss_pred ------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC-C--chh-----h
Confidence 4899999999999999999999999999996 666888999999999999999865422 1 111 1
Q ss_pred CceEEEccCChhhcccccee-eeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTGWKI-GWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVE 382 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~-G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~ 382 (434)
+..+++.|++|.++..|.++ |+++++++++++++..+.......+...++.+...|+. +....++..+++..+.+
T Consensus 200 ~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t----L~~R~~~~~~na~~la~ 275 (398)
T PRK08249 200 GADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKT----LKLRVRQQQESAMALAK 275 (398)
T ss_pred CCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch----HHHHHHHHHHHHHHHHH
Confidence 23378899999998556664 78888889988888777655566666666655555443 44455666777888888
Q ss_pred HhhhC
Q 013883 383 GLNAV 387 (434)
Q Consensus 383 ~L~~~ 387 (434)
.|++.
T Consensus 276 ~L~~~ 280 (398)
T PRK08249 276 YLQTH 280 (398)
T ss_pred HHHcC
Confidence 88764
No 189
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.88 E-value=4.5e-21 Score=189.70 Aligned_cols=217 Identities=17% Similarity=0.166 Sum_probs=161.9
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH----cC
Q 013883 140 NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM----AG 215 (434)
Q Consensus 140 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G 215 (434)
.+|+.+ -..+|+++++++.+ .+ ++++++|+++++.+++.+++++||+|+++.|+|.+....+.. .|
T Consensus 46 ~R~~~p-~~~~le~~lA~l~g--------~~-~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 46 SRSGNP-TRDLLQQALAELEG--------GA-GAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred cCCCCc-hHHHHHHHHHHHhC--------CC-cEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 345443 24678888888765 34 799999999999999999999999999999999975544332 34
Q ss_pred CEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCcc
Q 013883 216 AKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHIS 295 (434)
Q Consensus 216 ~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~ 295 (434)
.++..++ ..|++.+++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+.... +
T Consensus 116 ~~v~~~d------~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~---p 183 (382)
T TIGR02080 116 FRVLFVD------QGDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQN---P 183 (382)
T ss_pred eEEEEEC------CCCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCC---c
Confidence 5555442 13789999999989999999999999999986 5568888999999999999997654221 1
Q ss_pred ccCCCCCCCceEEEccCChhhc-cccceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHH
Q 013883 296 IASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDY 373 (434)
Q Consensus 296 ~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~ 373 (434)
+ .+ +..+++.|++|.++ .+|.+.|++++ +++++++++..+.....+.+++.++.+...|+ .+....++.
T Consensus 184 l-~~----gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~----tl~~R~~~~ 254 (382)
T TIGR02080 184 L-AL----GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLR----TLVARMRLQ 254 (382)
T ss_pred h-hh----CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccc----hHHHHHHHH
Confidence 1 11 12488899999985 57789999877 57788888877776666677776665544443 234445566
Q ss_pred HHHHHHHHHHhhhC
Q 013883 374 SAKKAILVEGLNAV 387 (434)
Q Consensus 374 ~~~~~~l~~~L~~~ 387 (434)
.++...+.+.|++.
T Consensus 255 ~~na~~~a~~L~~~ 268 (382)
T TIGR02080 255 QRNAQAIVEYLQTQ 268 (382)
T ss_pred HHHHHHHHHHHHhC
Confidence 67777788888764
No 190
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=9.4e-20 Score=180.31 Aligned_cols=299 Identities=21% Similarity=0.229 Sum_probs=212.3
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC--C-C--CCCCCC----CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG--K-N--QYARGH----GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~--~-~--~Y~~~~----G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
+.+.|....-.. .|..+.+++.+..... + + .|.... -+.+.|+.++++++ .++.++|++|.|+|
T Consensus 22 ~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~------a~~~~eIvft~~tT 94 (405)
T COG0520 22 PLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLN------ADSSDEIVFTRGTT 94 (405)
T ss_pred CeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCChh
Confidence 566676654443 5778888888776541 1 1 122211 23567777777776 45322899999999
Q ss_pred HHHHHHHHHc---cCCCCeEEEcCCCchh----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCC
Q 013883 181 EAIAATILGL---INPGDEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHN 253 (434)
Q Consensus 181 ~ai~~~~~~l---~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~N 253 (434)
+++.++..++ +.+||+|++.+--|++ +....+..|++++.+|.+ +++.+|+|.++..++++||+|.+++.+|
T Consensus 95 ~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~-~~g~~~~~~~~~~i~~~Tklvais~vSn 173 (405)
T COG0520 95 EALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD-DDGLLDLDALEKLITPKTKLVALSHVSN 173 (405)
T ss_pred HHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC-CCCCcCHHHHHHhcCCCceEEEEECccc
Confidence 9999999999 6999999999887776 445556679999999998 5899999999999999999999999999
Q ss_pred CcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCCh-hhccccceeeeEEeChhh
Q 013883 254 PTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGK-TFSLTGWKIGWAIAPPHL 332 (434)
Q Consensus 254 PTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK-~~g~~G~R~G~~~~~~~~ 332 (434)
.||.+.| +++|+++|+++|+++++|.+++.-.. ...+.. -+..+++.|..| .+|..| +|++++++++
T Consensus 174 ~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~~h~---~idv~~----l~~Df~afsgHKwl~gP~G--iGvLy~r~~~ 241 (405)
T COG0520 174 VTGTVNP---VKEIAELAHEHGALVLVDAAQAAGHL---PIDVQE----LGCDFLAFSGHKWLLGPTG--IGVLYVRKEL 241 (405)
T ss_pred cccccch---HHHHHHHHHHcCCEEEEECccccCcc---CCCchh----cCCCEEEEcccccccCCCc--eEEEEEchHH
Confidence 9999984 77799999999999999999875321 122222 345688999999 667446 8999999999
Q ss_pred HHHHHHH----------------------hhccccCCchHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHhhhC-C
Q 013883 333 TWGVRQA----------------------HSFLTFATSTPMQWAATAALRAPET-YYEELKRDYSAKKAILVEGLNAV-G 388 (434)
Q Consensus 333 ~~~l~~~----------------------~~~~~~~~~~~~q~a~~~~L~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g 388 (434)
++.+... .+....+++.....++.++++-.++ .++++.++.++..+++.+.|+++ +
T Consensus 242 l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~ 321 (405)
T COG0520 242 LEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPG 321 (405)
T ss_pred HhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8776211 1111223333344444455554322 24566677778888899999887 6
Q ss_pred CEeecC----CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 389 FKVFPS----SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 389 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+.++.+ .++.+.| .+. +. ...+++..|-+ +||.++-|..+
T Consensus 322 v~i~g~~~~~r~~~vsF-~v~--~~-~~~dv~~~L~~-~gI~vr~g~~c 365 (405)
T COG0520 322 VEIYGPPDADRGGIVSF-NVK--GI-HPHDVATLLDE-KGIAVRAGHHC 365 (405)
T ss_pred eEEecCCcccCceEEEE-EeC--CC-CHHHHHHHHHh-CCeEEEecccc
Confidence 888754 3554444 332 22 46788887755 58999998654
No 191
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.88 E-value=5.8e-21 Score=190.41 Aligned_cols=210 Identities=20% Similarity=0.248 Sum_probs=156.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhH----HHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY----EATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~ 223 (434)
..+|++.++++++ .+ ..++++++++++.+++.+++++||+|+++.|.|... ...+...|++++.++.
T Consensus 67 ~~~le~~lA~l~g--------~~-~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 67 LALLEQRMASLEG--------GE-AAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred HHHHHHHHHHHhC--------CC-cEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 5678888888776 23 345555668899999999999999999999988753 3445678999988876
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
+ |++.+++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... . .+ . .
T Consensus 138 ~------d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~-~--~l-~----~ 200 (403)
T PRK07503 138 T------DPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ-R--PL-E----L 200 (403)
T ss_pred C------CHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC-C--ch-h----h
Confidence 4 689999999999999999999999999885 677899999999999999999864321 1 11 1 1
Q ss_pred CceEEEccCChhhcccc-ceeeeEEeChhhHHHHHHH--hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQA--HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
+..+++.|++|.++.+| .|.|+++.+++++++++.. +.......+.+.++.+...|+. +....++..++...+
T Consensus 201 g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~t----l~~r~~~~~~na~~~ 276 (403)
T PRK07503 201 GADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKT----LALRMDRHCASAQAV 276 (403)
T ss_pred CCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcch----HHHHHHHHHHHHHHH
Confidence 33488999999998655 7889999889888887633 4333455566655555444443 344444455666777
Q ss_pred HHHhhhC
Q 013883 381 VEGLNAV 387 (434)
Q Consensus 381 ~~~L~~~ 387 (434)
.+.|++.
T Consensus 277 a~~L~~~ 283 (403)
T PRK07503 277 AEWLARH 283 (403)
T ss_pred HHHHHhC
Confidence 7777664
No 192
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=1e-20 Score=187.33 Aligned_cols=216 Identities=14% Similarity=0.144 Sum_probs=167.4
Q ss_pred CCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH----HcCC
Q 013883 141 QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS----MAGA 216 (434)
Q Consensus 141 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~G~ 216 (434)
+|+.+ ...+|+++++++.+ .+ .+++++|+++++..++.+++++||+|++++|.|++....+. ..|.
T Consensus 48 R~~~p-t~~~L~~~lA~l~g--------~~-~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi 117 (386)
T PRK08045 48 RRGNP-TRDVVQRALAELEG--------GA-GAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_pred CCCCc-cHHHHHHHHHHHhC--------CC-eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCe
Confidence 44443 34678888888765 34 69999999999999999999999999999999997444333 2344
Q ss_pred EEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccc
Q 013883 217 KIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISI 296 (434)
Q Consensus 217 ~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~ 296 (434)
++..++ ..|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... .++
T Consensus 118 ~v~~vd------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~---~pl 185 (386)
T PRK08045 118 RVLFVD------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQ---NPL 185 (386)
T ss_pred EEEEeC------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC---Cch
Confidence 555542 24899999999989999999999999999996 567888899999999999999765321 112
Q ss_pred cCCCCCCCceEEEccCChhhc-cccceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHH
Q 013883 297 ASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYS 374 (434)
Q Consensus 297 ~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 374 (434)
.+ ...+++.|++|.++ ..+.+.|++++ ++++++.++..+.....+.+++.++.+...|+. +....++..
T Consensus 186 -~~----gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t----l~~R~~~~~ 256 (386)
T PRK08045 186 -AL----GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRMELAQ 256 (386)
T ss_pred -hh----CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc----HHHHHHHHH
Confidence 11 22388999999995 55677899887 577888887777777778888888888888876 555667778
Q ss_pred HHHHHHHHHhhhC
Q 013883 375 AKKAILVEGLNAV 387 (434)
Q Consensus 375 ~~~~~l~~~L~~~ 387 (434)
+++..+.+.|++.
T Consensus 257 ~na~~la~~L~~~ 269 (386)
T PRK08045 257 RNAQAIVKYLQTQ 269 (386)
T ss_pred HHHHHHHHHHHcC
Confidence 8888888888765
No 193
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.88 E-value=1.1e-20 Score=188.17 Aligned_cols=210 Identities=17% Similarity=0.194 Sum_probs=158.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCc----hhHHHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFY----DSYEATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y----~~~~~~~~~~G~~~~~v~~ 223 (434)
..+|++.++++.+ .+ +.+++++++.++..++.+++++||+|+++...| ..+...+...|++++.++.
T Consensus 72 ~~~le~~lA~l~g--------~~-~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~ 142 (403)
T PRK07810 72 VSMFEERLRLIEG--------AE-ACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG 142 (403)
T ss_pred HHHHHHHHHHHhC--------CC-cEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence 5678888888775 33 567777778999989999999999999887544 4556667788999998864
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
. |++.+++++++++++|++++|+||||.+. ++++|+++|+++|+++|+|++|....+.. ++ . .
T Consensus 143 ~------d~~~l~~ai~~~tklV~~esp~Nptg~v~---dl~~I~~la~~~g~~vivD~a~a~~~~~~---~~-~----~ 205 (403)
T PRK07810 143 E------DLSQWEEALSVPTQAVFFETPSNPMQSLV---DIAAVSELAHAAGAKVVLDNVFATPLLQR---GL-P----L 205 (403)
T ss_pred C------CHHHHHHhcCcCceEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCCccccCC---hh-h----c
Confidence 3 88999999999999999999999999988 47779999999999999999998644321 11 1 1
Q ss_pred CceEEEccCChhhcccccee-eeEEeChhhHH-HHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTGWKI-GWAIAPPHLTW-GVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~-G~~~~~~~~~~-~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+..+++.|++|.++..|.++ |+++++++.+. .++..........++..++.+...|+. +....++..++...+.
T Consensus 206 gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t----l~~R~~~~~~~a~~~a 281 (403)
T PRK07810 206 GADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLET----LALRVRHSNASALRIA 281 (403)
T ss_pred CCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc----HHHHHHHHHHHHHHHH
Confidence 34588999999998788887 88888877665 455544444556677777776666664 3444555566666666
Q ss_pred HHhhhC
Q 013883 382 EGLNAV 387 (434)
Q Consensus 382 ~~L~~~ 387 (434)
+.|++.
T Consensus 282 ~~L~~~ 287 (403)
T PRK07810 282 EFLEGH 287 (403)
T ss_pred HHHhcC
Confidence 777764
No 194
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.88 E-value=1.8e-20 Score=185.35 Aligned_cols=212 Identities=20% Similarity=0.218 Sum_probs=164.1
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH----HHHcCCEEEEEE
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LSMAGAKIKCIT 222 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~ 222 (434)
-..+|++.++++.+ .+ ..++++++++|+..++.+++++||+|+++.+.|...... +...|+++..++
T Consensus 41 ~~~~le~~la~l~g--------~~-~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 111 (369)
T cd00614 41 TVDALEKKLAALEG--------GE-AALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVD 111 (369)
T ss_pred hHHHHHHHHHHHHC--------CC-CEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeC
Confidence 35677888887765 23 466677779999999999999999999999999886543 456788888876
Q ss_pred cCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC
Q 013883 223 LRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM 302 (434)
Q Consensus 223 ~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~ 302 (434)
.+ |++.+++++++++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|....+. . . + .
T Consensus 112 ~~------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~-~--~---~--~ 174 (369)
T cd00614 112 PD------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ-R--P---L--E 174 (369)
T ss_pred CC------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC-C--h---h--h
Confidence 54 589999999889999999999999999985 677999999999999999999764431 1 1 1 1
Q ss_pred CCceEEEccCChhhcccc-ceeeeEEeCh-hhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 303 YERTVTMNSLGKTFSLTG-WKIGWAIAPP-HLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 303 ~~~~i~i~S~SK~~g~~G-~R~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
.+..+++.|++|.++.+| .+.||+++++ ++++.++..+.....+.++..++++...|+. +....++..++...+
T Consensus 175 ~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t----l~~r~~~~~~na~~l 250 (369)
T cd00614 175 LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT----LPLRMERHSENALKV 250 (369)
T ss_pred hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC----HHHHHHHHHHHHHHH
Confidence 234588999999997555 7899999987 8888888776655566666666655555543 344566677788888
Q ss_pred HHHhhhCC
Q 013883 381 VEGLNAVG 388 (434)
Q Consensus 381 ~~~L~~~g 388 (434)
.+.|++.+
T Consensus 251 a~~L~~~~ 258 (369)
T cd00614 251 AEFLEKHP 258 (369)
T ss_pred HHHHHcCC
Confidence 88888764
No 195
>PRK07505 hypothetical protein; Provisional
Probab=99.88 E-value=3.3e-20 Score=185.70 Aligned_cols=296 Identities=15% Similarity=0.174 Sum_probs=181.1
Q ss_pred cCCeeEeCCC-CCCCCCcHHHHHHHHHHHHcCC-CCCCCC--CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 108 KHGAINLGQG-FPNFDGPDFVKDAAIQAIRDGK-NQYARG--HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 108 ~~~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~~-~~Y~~~--~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+...+||+.. +.++..+|.+.+++.+++.+.. ..+... ....+..+.+++.+.+..+. + .+++++| +++.
T Consensus 45 g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~----~-~~~~~sG-~~a~ 118 (402)
T PRK07505 45 GHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA----S-VLTFTSC-SAAH 118 (402)
T ss_pred CceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC----C-EEEECCh-HHHH
Confidence 3457899653 5555668999999999887521 111111 11233444444444444432 3 5666666 5677
Q ss_pred HHHHHHcc----CCCC-eEEEcCCCchhHH---HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCc
Q 013883 184 AATILGLI----NPGD-EVILFAPFYDSYE---ATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPT 255 (434)
Q Consensus 184 ~~~~~~l~----~~gd-~Vlv~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPT 255 (434)
..++..+. .+|+ .|++.+..|++.. ......+.+++.+|+. |++.++++++++++++++++|+|||
T Consensus 119 ~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~------d~~~l~~~~~~~~~~~vl~~p~~~~ 192 (402)
T PRK07505 119 LGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHN------DLDALEDICKTNKTVAYVADGVYSM 192 (402)
T ss_pred HHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCC------CHHHHHHHHhcCCCEEEEEeccccc
Confidence 66664432 2233 3666666555432 1122235677777653 7899999988788999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC--CCccccCCCC-CCCceEEEccCChhhccccceeeeEEe-Chh
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM--DHISIASLPG-MYERTVTMNSLGKTFSLTGWKIGWAIA-PPH 331 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~--~~~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~~~~-~~~ 331 (434)
|.+.+ +++|.++|++|++++|+||+|....++. .......+.. .+++++++.||||.+|.+| ||+++ +++
T Consensus 193 G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~ 266 (402)
T PRK07505 193 GGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDAE 266 (402)
T ss_pred CCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCHH
Confidence 99987 5668888999999999999986544432 2222222332 4678999999999999766 88764 778
Q ss_pred hHHHHHHHhhccccC--CchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeE--EEeeecCC
Q 013883 332 LTWGVRQAHSFLTFA--TSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTY--FVVVDHTP 406 (434)
Q Consensus 332 ~~~~l~~~~~~~~~~--~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~--~~~~~~~~ 406 (434)
+++.++......+++ ++.++..++.++|+. .++++.+.++.++++.+.+.+.+... ..+.+ +.++.+..
T Consensus 267 ~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~g~~~~i~~~~~~~ 340 (402)
T PRK07505 267 QIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE------QSGSFLPIRLIYIGD 340 (402)
T ss_pred HHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc------CCCCCCCEEEEEeCC
Confidence 888887755544443 344566666666652 23344455566666655544332211 12222 22332211
Q ss_pred CCCCCHHHHHHHHHHhcCeEEECC
Q 013883 407 FGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 407 ~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
.....+++++|+++ ||.+.|+
T Consensus 341 --~~~~~~~~~~l~~~-Gi~v~~~ 361 (402)
T PRK07505 341 --EDTAIKAAKQLLDR-GFYTSPV 361 (402)
T ss_pred --HHHHHHHHHHHHHC-CCeEeee
Confidence 11256788888755 9999986
No 196
>PRK14012 cysteine desulfurase; Provisional
Probab=99.88 E-value=3e-20 Score=186.21 Aligned_cols=293 Identities=16% Similarity=0.145 Sum_probs=189.0
Q ss_pred eEeCCCCCCCCCcHHHHHHHHHHHH--cCCCC-C--CCC------CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 112 INLGQGFPNFDGPDFVKDAAIQAIR--DGKNQ-Y--ARG------HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 112 i~l~~g~p~~~~~~~v~~~~~~~~~--~~~~~-Y--~~~------~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
|-|..+... +.++.+.+++.+.+. ..... . ... ..+.++|+.++++++ .+++ +|++++|++
T Consensus 5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g------~~~~-~v~~~~g~t 76 (404)
T PRK14012 5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIG------ADPR-EIVFTSGAT 76 (404)
T ss_pred EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcC------cCcC-eEEEeCCHH
Confidence 455554443 456678888877765 21100 0 010 123455666666664 4566 799999999
Q ss_pred HHHHHHHHHc----cCCCCeEEEcCCCchhHHHHH---HHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCC
Q 013883 181 EAIAATILGL----INPGDEVILFAPFYDSYEATL---SMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHN 253 (434)
Q Consensus 181 ~ai~~~~~~l----~~~gd~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~N 253 (434)
+++.+++.++ .++||+|++.++.|+.....+ ...|++++.++.++ ++.+|++.+++++++++++|++++++|
T Consensus 77 ~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~-~g~~d~~~l~~~i~~~t~lv~~~~~~n 155 (404)
T PRK14012 77 ESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS-NGIIDLEKLEAAMRDDTILVSIMHVNN 155 (404)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC-CCcCCHHHHHHhcCCCCEEEEEECcCC
Confidence 9999888766 378999999999998875544 34699999998874 678899999999999999999999999
Q ss_pred CcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhH
Q 013883 254 PTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLT 333 (434)
Q Consensus 254 PTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~ 333 (434)
|||.+.+ +++|.++|+++|+++|+|+++..... ...+.. .+-.+++.|+.|.+| ++ ++|+++++++..
T Consensus 156 ~tG~~~~---~~~I~~la~~~g~~vivD~a~~~g~~---~~~~~~----~~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~ 223 (404)
T PRK14012 156 EIGVIQD---IAAIGEICRERGIIFHVDAAQSVGKV---PIDLSK----LKVDLMSFSAHKIYG-PK-GIGALYVRRKPR 223 (404)
T ss_pred Cccchhh---HHHHHHHHHHcCCEEEEEcchhcCCc---ccCccc----CCCCEEEEehhhccC-CC-ceEEEEEecCCC
Confidence 9999885 67799999999999999999875221 112221 123467779999887 43 589998876643
Q ss_pred HHHHHH-h------hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecC-----CeeEEE
Q 013883 334 WGVRQA-H------SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPS-----SGTYFV 400 (434)
Q Consensus 334 ~~l~~~-~------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-----~~~~~~ 400 (434)
..+... . +....+.+.....+..+++.......+...++.++.++.+.+.|+++ ++.+..+ ...+++
T Consensus 224 ~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~ 303 (404)
T PRK14012 224 VRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNV 303 (404)
T ss_pred CCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEE
Confidence 222111 0 01112223333333334444322344556677788888888888775 4554321 123344
Q ss_pred eeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 401 VVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
++.+. +..++...| .++.+..|..|
T Consensus 304 ~~~~~-----~~~~~~~~l---~~~~i~~g~~~ 328 (404)
T PRK14012 304 SFNYV-----EGESLIMAL---KDLAVSSGSAC 328 (404)
T ss_pred EEeCc-----CHHHHHHhC---CCeEEEchhhh
Confidence 44432 234565554 27777777544
No 197
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.87 E-value=8.7e-22 Score=197.34 Aligned_cols=239 Identities=18% Similarity=0.254 Sum_probs=169.9
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhH----HHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY----EATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~ 223 (434)
..+|++.++++++ .+ ..++++++++++..++.+++++||+|+++.+.|++. ...+...|++++.++.
T Consensus 59 ~~~le~~lA~l~g--------~~-~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 59 TDVLEQRIAALEG--------GV-AALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred HHHHHHHHHHHhC--------CC-eEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence 4577888888765 23 578888889999999999999999999999998764 3446678999988874
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
+ |++.+++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... ...+ ..
T Consensus 130 ~------d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~------~~~l--~~ 192 (418)
T TIGR01326 130 D------DPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL------CRPI--DH 192 (418)
T ss_pred C------CHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc------CCch--hc
Confidence 3 789999999999999999999999999885 67799999999999999999974311 1111 12
Q ss_pred CceEEEccCChhhccccceeeeEEeCh-hhHHHHHHHhhccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTGWKIGWAIAPP-HLTWGVRQAHSFLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~ 381 (434)
+.++++.|++|.++.+|+|+||+++++ .+.... .....++.+.+.|.++...+... +.++ ++ .+ .
T Consensus 193 g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~---~~~~~~~~~~~~q~a~~~~~~~~~~~~~------~~-~~---~ 259 (418)
T TIGR01326 193 GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWAN---GRFPLFTTPDPSYHGLVFTETFGNPAFI------VK-AR---V 259 (418)
T ss_pred CCeEEEECccccccCCccceEEEEEecccccccc---cccccccCCCCccccchhhhhhchhhHH------HH-HH---H
Confidence 467999999999998999999999965 333222 22456677777777776665321 1111 11 11 2
Q ss_pred HHhhhCCCEeecCCeeEEEeeecCCCC------CCCHHHHHHHHHHhcCeE
Q 013883 382 EGLNAVGFKVFPSSGTYFVVVDHTPFG------HETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 382 ~~L~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Ll~~~GV~ 426 (434)
+.++..|+.+ .|.+.++++.++.... ..++.+++++|.++.+|.
T Consensus 260 ~~~~~~G~~~-~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~ 309 (418)
T TIGR01326 260 QLLRDLGAAL-SPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVA 309 (418)
T ss_pred HHHHhcCCCC-CHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 3344556655 4566666665543321 124566777777666654
No 198
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.87 E-value=1.4e-20 Score=187.31 Aligned_cols=210 Identities=16% Similarity=0.249 Sum_probs=153.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH----HHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~ 223 (434)
..+|+++++++++ . + ..+++++++.++..++.+++++||+|+++.|.|..+... +...|++++.++
T Consensus 67 ~~~Le~~lA~l~G------~--~-~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd- 136 (398)
T PRK07504 67 VDMFEKRMCALEG------A--E-DARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVD- 136 (398)
T ss_pred HHHHHHHHHHHhC------C--C-eeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEEC-
Confidence 5688888988876 2 2 234466778888888888899999999999999986544 345788888774
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
.+|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+. . . .. .
T Consensus 137 -----~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~-~--~-~~----~ 200 (398)
T PRK07504 137 -----GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ-K--P-LE----L 200 (398)
T ss_pred -----CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC-C--c-hh----h
Confidence 25899999999999999999999999999996 677888899999999999999865432 1 1 11 2
Q ss_pred CceEEEccCChhhccccceee-eEEeChhhHHH-HHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTGWKIG-WAIAPPHLTWG-VRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~G-~~~~~~~~~~~-l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+..+++.|++|.++.+|+|+| +++++++.+.+ ++..........+...++.+...|+. +....++..++...+.
T Consensus 201 gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t----l~~R~~~~~~na~~la 276 (398)
T PRK07504 201 GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLET----LPVRVRQQTESAAAIA 276 (398)
T ss_pred CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHHHH
Confidence 345889999999988999985 66677776643 44333333344444444444444443 3444555567777777
Q ss_pred HHhhhC
Q 013883 382 EGLNAV 387 (434)
Q Consensus 382 ~~L~~~ 387 (434)
+.|++.
T Consensus 277 ~~L~~~ 282 (398)
T PRK07504 277 DFLAGH 282 (398)
T ss_pred HHHHcC
Confidence 777764
No 199
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.87 E-value=4.7e-20 Score=184.61 Aligned_cols=260 Identities=17% Similarity=0.178 Sum_probs=181.8
Q ss_pred eEeCCCCCCCCCcHHHHHHHHHHHHcCC-CCC--CCC------CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 112 INLGQGFPNFDGPDFVKDAAIQAIRDGK-NQY--ARG------HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 112 i~l~~g~p~~~~~~~v~~~~~~~~~~~~-~~Y--~~~------~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.|..+.+. +.++.+++++.+.+.... ..+ ... ..+.++|+.++++++ .+++ +|++++|++++
T Consensus 5 ~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~-~v~~~~g~t~a 76 (402)
T TIGR02006 5 IYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIG------ADSR-EIVFTSGATES 76 (402)
T ss_pred EEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC------CCCC-eEEEeCCHHHH
Confidence 455555444 456778888877764321 111 110 123445666666654 4566 89999999999
Q ss_pred HHHHHHHc----cCCCCeEEEcCCCchhHHHHH---HHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCc
Q 013883 183 IAATILGL----INPGDEVILFAPFYDSYEATL---SMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPT 255 (434)
Q Consensus 183 i~~~~~~l----~~~gd~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPT 255 (434)
+..++..+ .++||+|++..+.|+.+...+ +..|++++.+++++ ++.+|++.++++++++++++++++++|||
T Consensus 77 ~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~lv~v~~~~n~t 155 (402)
T TIGR02006 77 NNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS-NGLIDLEELKAAIRDDTILVSIMHVNNEI 155 (402)
T ss_pred HHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC-CCcCCHHHHHHhcCCCCEEEEEECCCcCc
Confidence 99887765 368999999999998865543 45699999999874 67799999999999899999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHH
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG 335 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~ 335 (434)
|...+ +++|.++|+++|+++++|+++..... ...+.. ..-.+++.|..|.+|.+| +|+++.+++....
T Consensus 156 G~~~~---~~~I~~l~~~~g~~livD~a~a~g~~---~~~~~~----~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~ 223 (402)
T TIGR02006 156 GVIQD---IAAIGEICRERKVFFHVDAAQSVGKI---PINVNE----LKVDLMSISGHKIYGPKG--IGALYVRRKPRVR 223 (402)
T ss_pred eeccc---HHHHHHHHHHcCCEEEEEcchhcCCc---ccCccc----cCCCEEEEehhhhcCCCc--eEEEEEccCCCCC
Confidence 99985 66789999999999999999875321 111111 233477788889887446 8998887654333
Q ss_pred HHHHh-------hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEee
Q 013883 336 VRQAH-------SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVF 392 (434)
Q Consensus 336 l~~~~-------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 392 (434)
+.... +....+++.....++..+|+...++++...+++++.++.+++.|+++ ++.+.
T Consensus 224 ~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~ 288 (402)
T TIGR02006 224 LEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLN 288 (402)
T ss_pred CCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 22111 12223455555556656666544467777888899999999999875 55554
No 200
>PLN00144 acetylornithine transaminase
Probab=99.87 E-value=2.3e-20 Score=185.01 Aligned_cols=305 Identities=16% Similarity=0.108 Sum_probs=192.8
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...||+..|.- .+. .+|.+.+++.+++....+ +... ...+....+++.+.+..+ .+ .+++++++++|++.
T Consensus 15 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~-~~~~~~~~la~~l~~~~~----~~-~v~f~~sGseA~e~ 87 (382)
T PLN00144 15 KEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAH-VSNV-YHTIPQVELAKRLVASSF----AD-RVFFCNSGTEANEA 87 (382)
T ss_pred CEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCC-cccc-ccCHHHHHHHHHHHhcCC----CC-eEEEeCCcHHHHHH
Confidence 35688766631 122 367788888888876322 1111 113445566666654322 34 79999999999999
Q ss_pred HHHHcc---C------C------CCeEEEcCCCchhHHHHHHHcCCEE-EEEEcCC--CC----CCCCHHHHHhhccc-C
Q 013883 186 TILGLI---N------P------GDEVILFAPFYDSYEATLSMAGAKI-KCITLRP--PD----FAIPIEELKSTISK-N 242 (434)
Q Consensus 186 ~~~~l~---~------~------gd~Vlv~~p~y~~~~~~~~~~G~~~-~~v~~~~--~~----~~~d~~~l~~~i~~-~ 242 (434)
+++... . + ..+|+.....|++............ ..-++.+ .+ ...|++.+++.+.. +
T Consensus 88 AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 167 (382)
T PLN00144 88 AIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGK 167 (382)
T ss_pred HHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCC
Confidence 887542 1 0 2468888888988665443322211 1001100 00 01268999988864 4
Q ss_pred CcEEEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccc
Q 013883 243 TRAILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGW 321 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~ 321 (434)
+++|++...+||.|+.. +.+.+++|.++|++||+++|+||+|.+|.+.+.........-.+| +.+|||.++ +|+
T Consensus 168 ~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD----i~t~sK~l~-~G~ 242 (382)
T PLN00144 168 TAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD----IMTLAKPLA-GGL 242 (382)
T ss_pred eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC----EEEeccccc-CCc
Confidence 56676655589955532 445599999999999999999999999877665433212222344 889999999 999
Q ss_pred eeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEE
Q 013883 322 KIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYF 399 (434)
Q Consensus 322 R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 399 (434)
|+||+++++++.+.+.......+++.+++.+.++.+.|+-- .++.+.++..-+..++.+.+.+.+.+........|++
T Consensus 243 pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~ 322 (382)
T PLN00144 243 PIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLL 322 (382)
T ss_pred ceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecCceE
Confidence 99999999999887765455568888999999888555431 2222322222222344455555544322222237888
Q ss_pred EeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 400 VVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+|+.+.. +...++..+++ .||.+.|+
T Consensus 323 ~~l~l~~----~~~~~~~~~~~-~Gv~i~~~ 348 (382)
T PLN00144 323 VGIQLDV----PAGPLVDACRD-SGLLVLTA 348 (382)
T ss_pred EEEEecC----ccHHHHHHHHH-CCeEEeec
Confidence 9988721 34678887765 59999986
No 201
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.87 E-value=3.9e-20 Score=183.32 Aligned_cols=210 Identities=20% Similarity=0.244 Sum_probs=159.2
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchh----HHHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS----YEATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~ 223 (434)
..+|++.++++++ .+ .+++++++++++..++.+++++||+|+++.+.|.. +...+...|++++.++.
T Consensus 56 ~~~le~~la~l~g--------~~-~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 56 VAAFEERIAALEG--------AE-RAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred HHHHHHHHHHHhC--------CC-cEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence 5678888888765 24 57888999999999999999999999999988865 33456778999988876
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
+ |++.+++++++++++|++++|+||+|.+. ++++|.++|+++|+++|+|++|....+. . ++ . .
T Consensus 127 ~------d~~~l~~~i~~~tklV~le~p~np~g~~~---dl~~I~~la~~~gi~livD~a~~~~~~~-~--pl-~----~ 189 (380)
T TIGR01325 127 T------DLNAWEAAVKPNTKLVFVETPSNPLGELV---DIAALAELAHAIGALLVVDNVFATPVLQ-Q--PL-K----L 189 (380)
T ss_pred C------CHHHHHHhcCCCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC-C--ch-h----h
Confidence 4 68999999988999999999999999988 4677899999999999999999764322 1 11 1 1
Q ss_pred CceEEEccCChhhcccccee-eeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTGWKI-GWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVE 382 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~-G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~ 382 (434)
+..+++.|++|.++.+|.++ |++++++++++.++..........++... ..++.. .+.+....++..+++..+.+
T Consensus 190 g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a---~~~l~~-l~tl~~r~~~~~~~a~~la~ 265 (380)
T TIGR01325 190 GADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNA---WVLLKG-LETLSLRMQKQFDSALAIAE 265 (380)
T ss_pred CCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHH---HHHHhc-cCcHHHHHHHHHHHHHHHHH
Confidence 33588889999998677776 78888988888877665443333344433 333333 22345556667778888888
Q ss_pred HhhhC
Q 013883 383 GLNAV 387 (434)
Q Consensus 383 ~L~~~ 387 (434)
.|++.
T Consensus 266 ~L~~~ 270 (380)
T TIGR01325 266 WLQAQ 270 (380)
T ss_pred HHHcC
Confidence 88875
No 202
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=3e-20 Score=185.02 Aligned_cols=209 Identities=16% Similarity=0.179 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchh----HHHHHHHcCCEEEEEEcC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS----YEATLSMAGAKIKCITLR 224 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~ 224 (434)
.+|++.++++.+ . ++ .+++++| ++++.+++.+++++||.|+++.|.|.. +...+...|.+++.++..
T Consensus 63 ~~Le~~lA~l~g----~---~~-~v~~~sG-~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~ 133 (405)
T PRK08776 63 DLLGEALAELEG----G---AG-GVITATG-MGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLT 133 (405)
T ss_pred HHHHHHHHHHhC----C---Cc-eEEEcCH-HHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCC
Confidence 456666666544 2 33 5655555 799999999999999999999999997 444455678888877643
Q ss_pred CCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCC
Q 013883 225 PPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYE 304 (434)
Q Consensus 225 ~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~ 304 (434)
|++.+++++++++++|++++|+||||.+. ++++|+++|+++|+++|+|++|..... ..++ .+ +
T Consensus 134 ------d~~~l~~~i~~~tklV~l~~P~NPtG~v~---dl~~I~~la~~~gi~vIvD~a~a~~~~---~~pl-~~----g 196 (405)
T PRK08776 134 ------DPRSLADALAQSPKLVLIETPSNPLLRIT---DLRFVIEAAHKVGALTVVDNTFLSPAL---QKPL-EF----G 196 (405)
T ss_pred ------CHHHHHHhcCcCCeEEEEECCCCCCCccC---CHHHHHHHHHHcCCEEEEECCCccccc---CCcc-cc----c
Confidence 78999999988999999999999999986 578899999999999999999975321 1122 11 2
Q ss_pred ceEEEccCChhhccc-cceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 013883 305 RTVTMNSLGKTFSLT-GWKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVE 382 (434)
Q Consensus 305 ~~i~i~S~SK~~g~~-G~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~ 382 (434)
..+++.|.+|.++-+ +...|++++ ++++.+++...+.....+.+++.++++...|+ +++...++..++...+.+
T Consensus 197 aDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~----tl~~r~~~~~~na~~la~ 272 (405)
T PRK08776 197 ADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLR----TLDARLRVHQENADAIAA 272 (405)
T ss_pred CCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhC----cHHHHHHHHHHHHHHHHH
Confidence 348899999999644 467898877 46777777766655556666666666665444 567777788888888888
Q ss_pred HhhhC
Q 013883 383 GLNAV 387 (434)
Q Consensus 383 ~L~~~ 387 (434)
.|++.
T Consensus 273 ~L~~~ 277 (405)
T PRK08776 273 LLDGH 277 (405)
T ss_pred HHHcC
Confidence 88764
No 203
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.87 E-value=1.9e-20 Score=188.38 Aligned_cols=303 Identities=18% Similarity=0.153 Sum_probs=199.1
Q ss_pred cCCeeEeCCCCCCC---CCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFPNF---DGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p~~---~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...+||..|++.. -.+|.+.+++.+++.+....|.+..+..+|.+.+++.+ . ..+ .+++++++++|+.
T Consensus 49 G~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~----~---~~~-~v~~~~sGseA~e 120 (426)
T PRK00062 49 GNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELV----P---SIE-MVRMVNSGTEATM 120 (426)
T ss_pred CCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhC----C---CCC-EEEEecCHHHHHH
Confidence 44689998886543 26788999999998875443444434445555554443 1 244 7999999999999
Q ss_pred HHHHHccC--CCCeEEEcCCCchhHHHHHHHc-CCE------------EE-----EEEcCCCCCCCCHHHHHhhccc---
Q 013883 185 ATILGLIN--PGDEVILFAPFYDSYEATLSMA-GAK------------IK-----CITLRPPDFAIPIEELKSTISK--- 241 (434)
Q Consensus 185 ~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~-G~~------------~~-----~v~~~~~~~~~d~~~l~~~i~~--- 241 (434)
.+++.... .+++|+..++.|+++...+... |.. .. .+.+. ..|++.+++.+..
T Consensus 121 ~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~i~~~~~ 196 (426)
T PRK00062 121 SAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP----YNDLEAVEELFEEYGD 196 (426)
T ss_pred HHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC----CCCHHHHHHHHHhCCC
Confidence 99887543 3678999999999986443332 100 00 01111 1278888887753
Q ss_pred CCcEEEecCCCCCcccCCC-HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc
Q 013883 242 NTRAILMNTPHNPTGKMFT-REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG 320 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~~~~-~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 320 (434)
++.+|++......+|.+.+ .+.+++|.++|++||+++|+||+|.++..+ .......+...+| +.+|+|.++ .|
T Consensus 197 ~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g-~~~~~~~~~~~pD----i~~~gK~l~-~G 270 (426)
T PRK00062 197 EIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVA-LGGAQGYYGVTPD----LTTLGKIIG-GG 270 (426)
T ss_pred cEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccC-CccHHHHhCCCcc----hHhhhhHhh-CC
Confidence 5667777644555888775 778999999999999999999999988443 2222222221233 578999999 89
Q ss_pred ceeeeEEeChhhHHHHHHH---hhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEe-ecC
Q 013883 321 WKIGWAIAPPHLTWGVRQA---HSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKV-FPS 394 (434)
Q Consensus 321 ~R~G~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~ 394 (434)
+++|++++++++++.+... ....+++.+++.+.++.++|+.. ++.++++++.....++.|.+.+++.++.. ...
T Consensus 271 ~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg 350 (426)
T PRK00062 271 LPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNR 350 (426)
T ss_pred CcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEE
Confidence 9999999999998877522 22346778888999988888742 23555556666666666666555667655 345
Q ss_pred CeeEEEeeecCCCCC--------CC---HHHHHHHHHHhcCeEEECC
Q 013883 395 SGTYFVVVDHTPFGH--------ET---DIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 395 ~~~~~~~~~~~~~~~--------~~---~~~~~~~Ll~~~GV~v~pG 430 (434)
.|.|+.+. +.+... .+ ...+...|++ +||.+.|.
T Consensus 351 ~G~~~~i~-l~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~Gv~v~~~ 395 (426)
T PRK00062 351 VGSMFGLF-FTDEPVTNYADAKKSDTERFARFFHAMLD-EGVYLAPS 395 (426)
T ss_pred ecceEEEE-EecCCCcchhhhccccHHHHHHHHHHHHH-CCeEeecC
Confidence 66665432 211100 01 2467777765 59999885
No 204
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=4.2e-20 Score=185.36 Aligned_cols=314 Identities=17% Similarity=0.125 Sum_probs=201.8
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...+|+..|.- .+. .+|.+.+++.+++.+..+..... ...+....+++.+...... -..+ .+++++++++|++.
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~-~~~~~~~~la~~l~~~~p~-~~~~-~~~f~~sGseA~e~ 116 (421)
T PRK06777 40 REYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQI-VPYASYVTLAERINALAPI-DGPA-KTAFFTTGAEAVEN 116 (421)
T ss_pred CEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccc-cCChHHHHHHHHHHHhCCC-CCCc-eEEEeCCcHHHHHH
Confidence 35788866632 122 36778889998887643211111 1123345566666544321 1124 68889999999999
Q ss_pred HHHHcc--CCCCeEEEcCCCchhHHHHHHHc-CCE-------------EEEEEcCCCCCC----CCHHHHHhhcc-----
Q 013883 186 TILGLI--NPGDEVILFAPFYDSYEATLSMA-GAK-------------IKCITLRPPDFA----IPIEELKSTIS----- 240 (434)
Q Consensus 186 ~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G~~-------------~~~v~~~~~~~~----~d~~~l~~~i~----- 240 (434)
+++... ....+|+.....|++.......+ |.. +..+++.+...+ .+++.+++.+.
T Consensus 117 AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~ 196 (421)
T PRK06777 117 AVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAP 196 (421)
T ss_pred HHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCC
Confidence 887553 23357888888888875544322 210 111222211111 13566777664
Q ss_pred cCCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccc
Q 013883 241 KNTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 241 ~~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
++..+|++...++..|+ +++.+.+++|.++|++||+++|+||+|.+|.+.+.......+...+| +.++||.++ +
T Consensus 197 ~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pD----iv~~sK~l~-~ 271 (421)
T PRK06777 197 DQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPD----LITMAKSLG-G 271 (421)
T ss_pred CceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCC----EEeeehhhc-C
Confidence 24566676655888886 57899999999999999999999999999877765444444432333 347999999 9
Q ss_pred cceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----C-CEeecC
Q 013883 320 GWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----G-FKVFPS 394 (434)
Q Consensus 320 G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g-~~~~~~ 394 (434)
|+|+||+++++++++.+.......+++.+++.+.++.++|+..++ +++.++++++.+++++.|+++ + +..+.+
T Consensus 272 G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg 349 (421)
T PRK06777 272 GMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE--EKLCQRALILGAHLVEVLEKAKASCPAIVDIRA 349 (421)
T ss_pred CCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecC
Confidence 999999999999988776555556888999999999999975322 356667777777777777664 2 334577
Q ss_pred CeeEEEe-eecCCCCCCCHHHHHHHH---HHhcCeEEECCCCC
Q 013883 395 SGTYFVV-VDHTPFGHETDIAFCEYL---IKEVGVVAIPTSVF 433 (434)
Q Consensus 395 ~~~~~~~-~~~~~~~~~~~~~~~~~L---l~~~GV~v~pG~~F 433 (434)
.|.|+.+ +..+..+. ++.+++.++ +.+.||.+.|+..|
T Consensus 350 ~G~~~~i~~~~~~~~~-~~~~~~~~l~~~~~~~Gv~i~~~~~~ 391 (421)
T PRK06777 350 RGSMVAVEFNDPQTGK-PSPEFTRQYQRQALEEGLLLLSCGVH 391 (421)
T ss_pred ceEEEEEEEecCccCC-ccHHHHHHHHHHHHhCCeEEeecCCC
Confidence 8888754 33211111 223344433 23469999998654
No 205
>PLN02624 ornithine-delta-aminotransferase
Probab=99.87 E-value=3e-20 Score=188.84 Aligned_cols=304 Identities=14% Similarity=0.142 Sum_probs=191.1
Q ss_pred cCCeeEeCCCCCCCCC---cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFPNFDG---PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~---~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|+-.... +|.+.+++.+++.+..... +. -..+....+++.+.+..+ .+ .+++++++++|++
T Consensus 74 G~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~-~~-~~~~~~~~la~~L~~~~~----~~-~~~f~~SGseA~e 146 (474)
T PLN02624 74 GKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSS-RA-FYNDKFPEFAEYLTSMFG----YD-MVLPMNTGAEGVE 146 (474)
T ss_pred CCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcc-cc-cCCHHHHHHHHHHHhhcC----CC-eEEEeCChHHHHH
Confidence 3467888777544433 7889999999887632111 11 112223334444444333 24 6888999999999
Q ss_pred HHHHHccC---------CCC-eEEEcCCCchhHHHHHHHcCCE-------------EEEEEcCCCCCCCCHHHHHhhcc-
Q 013883 185 ATILGLIN---------PGD-EVILFAPFYDSYEATLSMAGAK-------------IKCITLRPPDFAIPIEELKSTIS- 240 (434)
Q Consensus 185 ~~~~~l~~---------~gd-~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~d~~~l~~~i~- 240 (434)
.+++.... +++ .|+...-.|++..........+ +..+++ -|++.+++.++
T Consensus 147 ~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~ 220 (474)
T PLN02624 147 TAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF------GDLDALEKIFEE 220 (474)
T ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC------CCHHHHHHHHHh
Confidence 98874432 133 5777777787754332222111 122222 16888988885
Q ss_pred --cCCcEEEecCCCCCcccCCCHHH-HHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc
Q 013883 241 --KNTRAILMNTPHNPTGKMFTREE-LNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS 317 (434)
Q Consensus 241 --~~~~~i~~~~p~NPTG~~~~~e~-l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 317 (434)
.++++|++..++|++|.+++.++ +++|.++|++||+++|+||+|.+|.+.|...........+| +.++||.+|
T Consensus 221 ~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pD----iv~lsK~lg 296 (474)
T PLN02624 221 DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPD----VVILGKALG 296 (474)
T ss_pred CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCC----EEEeccccc
Confidence 35778889899999999887664 99999999999999999999998766554332211111122 444799999
Q ss_pred cccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----C--CEe
Q 013883 318 LTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----G--FKV 391 (434)
Q Consensus 318 ~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g--~~~ 391 (434)
.+++++|+++++++++..+.......+++.+++.+.++.++|+..++ .++.++..++.+.+++.|+++ . +..
T Consensus 297 gG~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~--~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~ 374 (474)
T PLN02624 297 GGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQD--EKLAERSAKLGQELRDQLQKIQKQFPKLIKE 374 (474)
T ss_pred CCCCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 66699999999998887765544445778888999999888875321 123334444445555544442 1 333
Q ss_pred ecCCeeEEEe-eecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 392 FPSSGTYFVV-VDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 392 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.+.|.++.+ ++....+.....+++++|.+ +||++.|+.
T Consensus 375 vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e-~GV~v~p~~ 414 (474)
T PLN02624 375 VRGRGLLNAVVLNSPKLGPVSAYDVCLKLKE-RGLLAKPTH 414 (474)
T ss_pred EEeeEEEEEEEecCCCcChHHHHHHHHHHHh-CCeEEecCC
Confidence 4556665542 32211111234578887754 699999863
No 206
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=4.8e-20 Score=183.15 Aligned_cols=210 Identities=16% Similarity=0.110 Sum_probs=154.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH----HHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA----TLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~~ 223 (434)
..+|++.++++.+ .+ ++++++|+++|+.+++.+++++||+|++++|+|..+.. .+...|++++.++.
T Consensus 67 ~~~Le~~lA~l~g--------~~-~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 137 (394)
T PRK07050 67 SLALAQRLAEIEG--------GR-HALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP 137 (394)
T ss_pred HHHHHHHHHHHhC--------CC-eEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence 4566777766654 45 79999999999999999999999999999999998664 45678999887753
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
. +.+.+++++++++++|++++|+||+|. ..++++|+++|+++|+++|+|++|....+. ..+ ..
T Consensus 138 ~------~~~~l~~~i~~~tklV~le~p~Np~~~---~~di~~I~~ia~~~gi~livD~a~a~~~~~------~~l--~~ 200 (394)
T PRK07050 138 L------IGAGIADLIQPNTRLIWLEAPGSVTME---VPDVPAITAAARARGVVTAIDNTYSAGLAF------KPF--EH 200 (394)
T ss_pred C------CHHHHHHhcCCCCeEEEEECCCCCCcc---HhhHHHHHHHHHHcCCEEEEECCccccccc------CHH--Hc
Confidence 3 457889999999999999999999974 558999999999999999999999763221 111 11
Q ss_pred CceEEEccCChhhc-cccceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFS-LTGWKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 304 ~~~i~i~S~SK~~g-~~G~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+..+++.|++|.++ ..+.+.|++++ ++++.++++..+.....+.++...+.+...|+. +....++..++...+.
T Consensus 201 GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t----l~~Rl~~~~~~a~~la 276 (394)
T PRK07050 201 GVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLPS----LQVRLAAHDRSALEVA 276 (394)
T ss_pred CCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHHHH
Confidence 34588999999996 23446887776 577888887777655556666655544444443 2223444455555666
Q ss_pred HHhhhC
Q 013883 382 EGLNAV 387 (434)
Q Consensus 382 ~~L~~~ 387 (434)
+.|++.
T Consensus 277 ~~L~~~ 282 (394)
T PRK07050 277 EWLKAR 282 (394)
T ss_pred HHHHhC
Confidence 666654
No 207
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.87 E-value=2.6e-20 Score=185.00 Aligned_cols=210 Identities=23% Similarity=0.257 Sum_probs=156.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhH----HHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY----EATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~ 223 (434)
..+|++.++++++ .+ ..++++++++++.+++.+++++||+|+++.|.|... ...+...|++++.++.
T Consensus 61 ~~~le~~lA~l~g--------~~-~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 61 VSNLEGRIAFLEG--------TE-AAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred HHHHHHHHHHHhC--------CC-cEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 4678999998886 33 466777778899999999999999999999987653 3445668999888876
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
+ |++.+++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|...... . .+. .
T Consensus 132 ~------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~-~--~~~-----~ 194 (391)
T TIGR01328 132 A------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLT-N--PVA-----L 194 (391)
T ss_pred C------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccC-C--chh-----c
Confidence 4 789999999999999999999999999885 667888999999999999999864332 1 111 1
Q ss_pred CceEEEccCChhhccccce-eeeEEeChhhHHHHHHHhhc--cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTGWK-IGWAIAPPHLTWGVRQAHSF--LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R-~G~~~~~~~~~~~l~~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
+..+++.|++|.+|.+|.+ .|+++++++++++++..... .....+....+.+...|+. +....++..++...+
T Consensus 195 g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t----l~~r~~~~~~na~~l 270 (391)
T TIGR01328 195 GVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT----LNIRMKRHSENAMKV 270 (391)
T ss_pred CCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc----HHHHHHHHHHHHHHH
Confidence 2348889999999888876 57888889988888754322 2233444444444444443 334456666777777
Q ss_pred HHHhhhC
Q 013883 381 VEGLNAV 387 (434)
Q Consensus 381 ~~~L~~~ 387 (434)
.+.|++.
T Consensus 271 a~~L~~~ 277 (391)
T TIGR01328 271 AEYLKSH 277 (391)
T ss_pred HHHHHhC
Confidence 7877764
No 208
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=3.8e-20 Score=183.73 Aligned_cols=212 Identities=14% Similarity=0.137 Sum_probs=154.8
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH----HcCCEEEEE
Q 013883 146 HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS----MAGAKIKCI 221 (434)
Q Consensus 146 ~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~v 221 (434)
....+|+++++++.+. +..+++ +++++|+.+++.+++++||+|++++|+|......+. ..|++++.+
T Consensus 61 p~~~~Le~~lA~~~g~--------~~~i~~-~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~ 131 (388)
T PRK07811 61 PTRTALEEQLAALEGG--------AYGRAF-SSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPV 131 (388)
T ss_pred ccHHHHHHHHHHHhCC--------CceEEe-CCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEe
Confidence 4578999999998862 214555 455899999999999999999999999996544433 257777766
Q ss_pred EcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCC
Q 013883 222 TLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPG 301 (434)
Q Consensus 222 ~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~ 301 (434)
+. .|++.+++++++++++|++++|+||||.+. ++++|+++|+++|+++|+|++|...... .++.
T Consensus 132 d~------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~---dl~~I~~la~~~gi~lIvD~a~a~~~~~---~p~~---- 195 (388)
T PRK07811 132 DL------SDLDAVRAAITPRTKLIWVETPTNPLLSIT---DIAALAELAHDAGAKVVVDNTFASPYLQ---QPLA---- 195 (388)
T ss_pred CC------CCHHHHHHhcCcCCeEEEEECCCCCcceec---CHHHHHHHHHHcCCEEEEECCCCccccC---Cchh----
Confidence 54 379999999999999999999999999875 6778999999999999999999865321 1111
Q ss_pred CCCceEEEccCChhhcccc-ceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 013883 302 MYERTVTMNSLGKTFSLTG-WKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAI 379 (434)
Q Consensus 302 ~~~~~i~i~S~SK~~g~~G-~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 379 (434)
.+..+++.|++|.++.+| .+.||++++ +++.+.++..+.......+...++.+...|+. +....++..++...
T Consensus 196 -~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t----l~~R~~~~~~na~~ 270 (388)
T PRK07811 196 -LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT----LAVRMDRHSENAEA 270 (388)
T ss_pred -hCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc----HHHHHHHHHHHHHH
Confidence 123489999999997544 467998885 66666666655544444455544444444543 34445556667777
Q ss_pred HHHHhhhC
Q 013883 380 LVEGLNAV 387 (434)
Q Consensus 380 l~~~L~~~ 387 (434)
+.+.|++.
T Consensus 271 la~~L~~~ 278 (388)
T PRK07811 271 VAEFLAGH 278 (388)
T ss_pred HHHHHHhC
Confidence 88888764
No 209
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.87 E-value=3e-20 Score=185.99 Aligned_cols=303 Identities=17% Similarity=0.196 Sum_probs=198.5
Q ss_pred cCCeeEeCCCCCCCC---CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFPNFD---GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~---~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...+||..|+.... .+|.+.+++.++++....... .. ..+....+++.+.+..| .+ .+++++++++|+.
T Consensus 36 g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~-~~-~~~~~~~l~~~l~~~~~----~~-~~~~~~SGs~A~e 108 (401)
T TIGR01885 36 GKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSR-AF-YNDVFGEFAEYVTKLFG----YD-KVLPMNTGAEAVE 108 (401)
T ss_pred CCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhcccccc-cc-CCHHHHHHHHHHHhhcC----CC-EEEEeCccHHHHH
Confidence 346789988866555 378899999888775322111 11 12333444555544443 24 6889999999999
Q ss_pred HHHHHcc---------CC-CCeEEEcCCCchhH-HHHHHHcCC------------EEEEEEcCCCCCCCCHHHHHhhcc-
Q 013883 185 ATILGLI---------NP-GDEVILFAPFYDSY-EATLSMAGA------------KIKCITLRPPDFAIPIEELKSTIS- 240 (434)
Q Consensus 185 ~~~~~l~---------~~-gd~Vlv~~p~y~~~-~~~~~~~G~------------~~~~v~~~~~~~~~d~~~l~~~i~- 240 (434)
.++..+. .+ .+.|+...-.|++. ...+...|- .+..++.. |++.++++++
T Consensus 109 ~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~le~~l~~ 182 (401)
T TIGR01885 109 TAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN------NLEALEEALED 182 (401)
T ss_pred HHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC------CHHHHHHHHHh
Confidence 9988752 13 35677777777753 333333221 12223222 6888888875
Q ss_pred --cCCcEEEecCCCCCcccCCCHH-HHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc
Q 013883 241 --KNTRAILMNTPHNPTGKMFTRE-ELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS 317 (434)
Q Consensus 241 --~~~~~i~~~~p~NPTG~~~~~e-~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 317 (434)
++..+|++..+++++|...+.+ .+++|.++|++||+++|+||+|.++.+.|...... ..+....++ +++|.++
T Consensus 183 ~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~-~~~~~~di~---~~gK~l~ 258 (401)
T TIGR01885 183 HGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVD-HENVKPDIV---LLGKALS 258 (401)
T ss_pred cCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHh-hcCCCCCEE---Eeecccc
Confidence 3556778878899999988644 69999999999999999999998876666443321 112222222 5789998
Q ss_pred cccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEe---ecC
Q 013883 318 LTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKV---FPS 394 (434)
Q Consensus 318 ~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~---~~~ 394 (434)
..|+|+|++++++++++.++......+++.+++.+.++.++|+..++ +.+.++.+++.+++++.|++++..+ +.+
T Consensus 259 ~g~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~--~~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g 336 (401)
T TIGR01885 259 GGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEE--EKLAENAEKLGEIFRDQLKKLPKPIITEVRG 336 (401)
T ss_pred CCCCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhccCCceeEEee
Confidence 65699999999999988776433334677788889999888875332 1344667777888999998875333 245
Q ss_pred CeeEEE-eeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 395 SGTYFV-VVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 395 ~~~~~~-~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
.|.|+. +++....+ .+..+++.+|.+ +||.+.|+.
T Consensus 337 ~g~~~~i~~~~~~~~-~~~~~l~~~l~~-~Gv~v~~~~ 372 (401)
T TIGR01885 337 RGLLNAIVIDESKTG-RTAWDLCLKLKE-KGLLAKPTH 372 (401)
T ss_pred cCeeEEEEeccCcch-hHHHHHHHHHHh-CCEEEEecC
Confidence 666654 33321101 135678888865 599998853
No 210
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=5e-20 Score=181.80 Aligned_cols=237 Identities=16% Similarity=0.189 Sum_probs=173.3
Q ss_pred CCCCcHHHHHHHHHHHHcCCCCCCCCC--CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeE
Q 013883 120 NFDGPDFVKDAAIQAIRDGKNQYARGH--GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEV 197 (434)
Q Consensus 120 ~~~~~~~v~~~~~~~~~~~~~~Y~~~~--G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~V 197 (434)
+++.++.+.++..+.. ...+.|.... +..+|+++++++.+ .+ ++++++|+++|+..++.+++++||+|
T Consensus 34 ~~~~~~~~~~~~~~~~-~~~~~Y~r~~npt~~~Le~~iA~le~--------~~-~~~~~~sG~~Ai~~~l~all~~GD~V 103 (394)
T PRK09028 34 VFDTVAEMRHAAKNRA-NGEMFYGRRGTPTHFAFQAAIVELEG--------GA-GTALYPSGAAAISNALLSFLKAGDHL 103 (394)
T ss_pred ccCCHHHHHHHhccCc-cCCceecCCCCchHHHHHHHHHHHhC--------CC-cEEEECCHHHHHHHHHHHHhCCCCEE
Confidence 3445555444433221 1224576632 34689999998854 23 68899999999999999999999999
Q ss_pred EEcCCCchhHHHH----HHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHH
Q 013883 198 ILFAPFYDSYEAT----LSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE 273 (434)
Q Consensus 198 lv~~p~y~~~~~~----~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~ 273 (434)
++++|.|.++... +...|+++..++.. +.+.+++++++++|+|++++|+||||.+. ++++|+++|++
T Consensus 104 vv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~------~~e~l~~~l~~~TklV~lespsNPtg~v~---dl~~I~~la~~ 174 (394)
T PRK09028 104 LMVDSCYEPTRDLCDKILKGFGIETTYYDPM------IGEGIRELIRPNTKVLFLESPGSITMEVQ---DVPTLSRIAHE 174 (394)
T ss_pred EEECCCcHHHHHHHHHhhhhcceEEEEECCC------CHHHHHHhcCcCceEEEEECCCCCCCcHH---HHHHHHHHHHH
Confidence 9999999887654 34578888766433 46789999999999999999999998764 78999999999
Q ss_pred cCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhh-ccccceeeeEEeChhhHHHHHHHhhccccCCchHHH
Q 013883 274 NDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTF-SLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQ 352 (434)
Q Consensus 274 ~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q 352 (434)
+|+++|+|++|..... ..+ + ..+-.+++.|.+|.+ |..+...|+++.++++.+.++..+.....+.++...
T Consensus 175 ~g~~lvvD~t~a~p~~---~~P---l--~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a 246 (394)
T PRK09028 175 HDIVVMLDNTWASPIN---SRP---F--EMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDV 246 (394)
T ss_pred cCCEEEEECCcccccc---CCc---c--ccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHH
Confidence 9999999999975321 111 1 234569999999999 555667898888888777777665555556666666
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 353 WAATAALRAPETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 353 ~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
+.+...|+. +.-..++..++...+.+.|++.
T Consensus 247 ~l~~rgl~T----L~lR~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 247 YLAMRGLRT----LGVRLAQHEKNALKVANWLATR 277 (394)
T ss_pred HHHHcccCc----HHHHHHHHHHHHHHHHHHHhcC
Confidence 655555554 4445566677778888888775
No 211
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.86 E-value=1.8e-19 Score=183.57 Aligned_cols=301 Identities=18% Similarity=0.151 Sum_probs=205.5
Q ss_pred EeCCCCCCCCCcHHHHHHHHHHH-HcCCCCC---CCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH--
Q 013883 113 NLGQGFPNFDGPDFVKDAAIQAI-RDGKNQY---ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT-- 186 (434)
Q Consensus 113 ~l~~g~p~~~~~~~v~~~~~~~~-~~~~~~Y---~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~-- 186 (434)
-++.|++++..++.+.+.+.+.. -...+.| ...+|..+++.++++++.+.+|.+ .. .+..++|+.+.+..+
T Consensus 72 ~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~-~l~~~~GA~a~~~~l~~ 148 (481)
T PRK04366 72 FYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD--AV-TLQPAAGAHGELTGLLM 148 (481)
T ss_pred eecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ce-EEEeCcHHHHHHHHHHH
Confidence 36778899888998888887652 2244667 356788999999999999999974 33 566667766665533
Q ss_pred HH-HccCCCC----eEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCH
Q 013883 187 IL-GLINPGD----EVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTR 261 (434)
Q Consensus 187 ~~-~l~~~gd----~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~ 261 (434)
++ .+.++|| +|++++|.|+.+...+...|++++.++++. ++.+|++.+++++++++++|++++|+ |||.. .
T Consensus 149 ~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~-~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~--~ 224 (481)
T PRK04366 149 IRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNE-DGLVDLEALKAAVGEDTAALMLTNPN-TLGLF--E 224 (481)
T ss_pred HHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCC-CCCcCHHHHHhhcccCCeEEEEeCCC-Ccccc--c
Confidence 22 3456776 999999999999999999999999999963 68899999999999999999999997 99964 3
Q ss_pred HHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccc----cceeeeEEeChhhHHHHH
Q 013883 262 EELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT----GWKIGWAIAPPHLTWGVR 337 (434)
Q Consensus 262 e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~~~~~~~~~~~l~ 337 (434)
+++++|+++|+++|+++|+|.++..-..+ . .. ++..+-.+++++..|.++.| |..+|++.+++++.+.+.
T Consensus 225 ~dl~eI~~~a~~~gal~iVD~a~~~~~~g-~-~~----~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp 298 (481)
T PRK04366 225 RNILEIAEIVHEAGGLLYYDGANLNAILG-K-AR----PGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLP 298 (481)
T ss_pred hHHHHHHHHHHHcCCEEEEEecChhhhcc-c-CC----ccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCC
Confidence 47999999999999999999998532111 0 11 11234568889999998644 456889888877665541
Q ss_pred H-------------------HhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCee
Q 013883 338 Q-------------------AHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGT 397 (434)
Q Consensus 338 ~-------------------~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 397 (434)
. +++...++.+.....++..+|.. +.+.+++..++...+.+++.+.|+++ +.+.-+...
T Consensus 299 ~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~~~~ 377 (481)
T PRK04366 299 VPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-YDLPYDRPC 377 (481)
T ss_pred CCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-CcccCCCCe
Confidence 0 00111112222333344444443 44567777777788889999999886 333222111
Q ss_pred EE-EeeecC--CCCCCCHHHHHHHHHHhcCeEEE
Q 013883 398 YF-VVVDHT--PFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 398 ~~-~~~~~~--~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
+. ..++.. .....+..++.++|.++ ||.+.
T Consensus 378 ~~~~~~~~~~~~~~g~~~~~v~~~L~~~-Gi~~~ 410 (481)
T PRK04366 378 MHEFVLSGKKLKETGVRTLDIAKRLLDY-GFHPP 410 (481)
T ss_pred eEEEEEECccccccCCCHHHHHHHHHHC-CccCC
Confidence 11 222221 11112577888888764 98754
No 212
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.86 E-value=1.1e-19 Score=182.44 Aligned_cols=311 Identities=13% Similarity=0.118 Sum_probs=197.2
Q ss_pred CCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...||+..|+-. +. .+|.+.+++.+++.+..+..... ...+....+++.+.+..+. ...+ .+++++++++|++.
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~-~~~~~~~~la~~l~~~~p~-~~~~-~~~f~~sGseA~e~ 116 (421)
T PRK09792 40 NEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQI-VPYESYVTLAEKINALAPV-SGQA-KTAFFTTGAEAVEN 116 (421)
T ss_pred CEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCc-cCCHHHHHHHHHHHHhCCC-CCCc-eEEEeCChHHHHHH
Confidence 357888666322 22 36788889988887643211111 1234455566666654321 1123 68888899999999
Q ss_pred HHHHcc--CCCCeEEEcCCCchhHHHHHHHc-CC-------------EEEEEEcCCCCCCC----CHHHHHhhcc-----
Q 013883 186 TILGLI--NPGDEVILFAPFYDSYEATLSMA-GA-------------KIKCITLRPPDFAI----PIEELKSTIS----- 240 (434)
Q Consensus 186 ~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~~~~~----d~~~l~~~i~----- 240 (434)
+++... ....+|+.....|++........ |. .+..+|+..+..++ +++.+++.+.
T Consensus 117 AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~ 196 (421)
T PRK09792 117 AVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEA 196 (421)
T ss_pred HHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCC
Confidence 887653 23357888888888864433221 21 12333332211112 3477777775
Q ss_pred cCCcEEEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccc
Q 013883 241 KNTRAILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 241 ~~~~~i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
++.++|++...++++|+.+ +.+.+++|.++|++||+++|+||+|.+|.+.+....+..+...+| +.+|+|.++ +
T Consensus 197 ~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD----i~t~gK~l~-~ 271 (421)
T PRK09792 197 KQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD----LMTMAKSLA-G 271 (421)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc----EEEeehhhc-C
Confidence 3456777766699999865 889999999999999999999999999987776555554433344 689999999 9
Q ss_pred cceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCe-
Q 013883 320 GWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSG- 396 (434)
Q Consensus 320 G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~- 396 (434)
|+|+||+++++++.+.+.......+++.+++.+.++.++|+-. +++++++++.-+..++.+.+..++.+. +....|
T Consensus 272 G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~-v~~vrG~ 350 (421)
T PRK09792 272 GMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPA-IAAVRGL 350 (421)
T ss_pred CCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCC-cceeccc
Confidence 9999999999999877654445568888999999777766532 234444443222223333322233443 223445
Q ss_pred eEEEeeecCCCCC-----CCHHHHHHHHHHhcCeEEEC
Q 013883 397 TYFVVVDHTPFGH-----ETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 397 ~~~~~~~~~~~~~-----~~~~~~~~~Ll~~~GV~v~p 429 (434)
|+++|+.+..... .....++..+++ +||.+.+
T Consensus 351 Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~ 387 (421)
T PRK09792 351 GSMIAAEFNDPQTGEPSAAIAQKIQQRALA-QGLLLLT 387 (421)
T ss_pred ceEEEEEecCCccCCcchHHHHHHHHHHHH-CCcEEee
Confidence 7888888753211 123456667765 5999975
No 213
>PLN02651 cysteine desulfurase
Probab=99.86 E-value=1.8e-19 Score=178.15 Aligned_cols=285 Identities=19% Similarity=0.189 Sum_probs=192.5
Q ss_pred CCcHHHHHHHHHHHHcCC-CCC--CCCCC------cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc--
Q 013883 122 DGPDFVKDAAIQAIRDGK-NQY--ARGHG------VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-- 190 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~-~~Y--~~~~G------~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-- 190 (434)
+.++.+.+++.+.+.+.. ... ....+ +.++|+.+++++ | .+++ +|++++|+++++.+++..+
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~-~v~~t~~~t~a~~~~l~~~~~ 82 (364)
T PLN02651 10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI----G--ADPK-EIIFTSGATESNNLAIKGVMH 82 (364)
T ss_pred CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh----C--CCCC-eEEEeCCHHHHHHHHHHHHHH
Confidence 456678888877664321 100 00001 234455555544 4 4466 8999999999988776554
Q ss_pred --cCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 191 --INPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 191 --~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
.++||+|++.+..|+.+... +...|++++.++.++ ++.+|++.++++++++++++++++++|+||...+ ++
T Consensus 83 ~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~---l~ 158 (364)
T PLN02651 83 FYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS-DGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP---VE 158 (364)
T ss_pred hccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCC-CCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc---HH
Confidence 47899999998777765433 445799999998874 6788999999999999999999999999999986 66
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHh-----
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAH----- 340 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~----- 340 (434)
+|.++|+++|+++++|.++..... ...+.. .+-.+++.|..|.+|..| +|+++.+++....+....
T Consensus 159 ~I~~~~~~~g~~~~vD~a~~~g~~---~~~~~~----~~~D~~~~s~hK~~gp~G--~g~l~v~~~~~~~l~p~~~g~~~ 229 (364)
T PLN02651 159 EIGELCREKKVLFHTDAAQAVGKI---PVDVDD----LGVDLMSISGHKIYGPKG--VGALYVRRRPRVRLEPLMSGGGQ 229 (364)
T ss_pred HHHHHHHHcCCEEEEEcchhhCCc---ccCccc----CCCCEEEechhhhCCCCc--eEEEEEcCCCCCCCCccccCCCc
Confidence 789999999999999999975321 112221 234578889999655334 899998876554432211
Q ss_pred --hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh-C-CCEeecCC------eeEEEeeecCCCCCC
Q 013883 341 --SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA-V-GFKVFPSS------GTYFVVVDHTPFGHE 410 (434)
Q Consensus 341 --~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~------~~~~~~~~~~~~~~~ 410 (434)
.....+++.....++..+|+...+..+..+++.++.++++.+.|++ + |++++.+. .+.. .+.+. +.
T Consensus 230 ~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~-~~~~~--~~- 305 (364)
T PLN02651 230 ERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTL-NLSFA--YV- 305 (364)
T ss_pred cCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEE-EEEeC--CC-
Confidence 1223456666666666666654334566778888888999998875 3 78777541 2232 23332 22
Q ss_pred CHHHHHHHHHHhcCeEEECCCCC
Q 013883 411 TDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 411 ~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
++.+++.+|. + |.+..|+.|
T Consensus 306 ~~~~~~~~L~-~--i~v~~g~~c 325 (364)
T PLN02651 306 EGESLLMGLK-E--VAVSSGSAC 325 (364)
T ss_pred CHHHHHHHhC-C--EEEEchhhc
Confidence 4678888773 3 999888743
No 214
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.86 E-value=6.5e-20 Score=184.26 Aligned_cols=316 Identities=14% Similarity=0.099 Sum_probs=189.5
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...||+..|.- .+. .+|.+.+++.+++.+..+....... .+.+.++++.+.+.... ...+ .+++++++++|++.
T Consensus 33 ~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~-~~~~~~la~~l~~~~p~-~~~~-~v~f~~sGseA~e~ 109 (420)
T TIGR00700 33 NRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTP-YEGYVALAEKLNRIAPG-SGPK-KSVFFNSGAEAVEN 109 (420)
T ss_pred CEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccC-ChHHHHHHHHHHHhCCC-CCCC-EEEEeCCcHHHHHH
Confidence 35788866632 122 3677888999988764321111111 23344566666544321 1124 79999999999999
Q ss_pred HHHHcc--CCCCeEEEcCCCchhHHHHHHHc-CC-------------EEEEEEcCC--CC--------CCCCHHHHHhhc
Q 013883 186 TILGLI--NPGDEVILFAPFYDSYEATLSMA-GA-------------KIKCITLRP--PD--------FAIPIEELKSTI 239 (434)
Q Consensus 186 ~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~--~~--------~~~d~~~l~~~i 239 (434)
+++... ....+|+.....|++.......+ |- .+..+|+.. .. +.-+++.+++.+
T Consensus 110 AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (420)
T TIGR00700 110 AVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIF 189 (420)
T ss_pred HHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHH
Confidence 887543 23457888888888865443322 11 122233211 00 001255666655
Q ss_pred c-----cCCcEEEecCCCCCcccCCC-HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCC
Q 013883 240 S-----KNTRAILMNTPHNPTGKMFT-REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLG 313 (434)
Q Consensus 240 ~-----~~~~~i~~~~p~NPTG~~~~-~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~S 313 (434)
. ++..+|++...+.-+|.+++ .+.+++|.++|++||+++|+||+|.+|.+.+....+..+...+| +.+||
T Consensus 190 ~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pD----i~~ls 265 (420)
T TIGR00700 190 VIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPD----LITTA 265 (420)
T ss_pred HhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCC----EEEee
Confidence 2 34566777655777888665 44599999999999999999999999977765444333322233 55699
Q ss_pred hhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCC-CE
Q 013883 314 KTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVG-FK 390 (434)
Q Consensus 314 K~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g-~~ 390 (434)
|.++ +|+|+||+++++++++.+.......+++.+++.+.++.++|+.. ++..+.+.+..+..++.+.+...+.+ +.
T Consensus 266 K~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~ 344 (420)
T TIGR00700 266 KSLA-DGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIG 344 (420)
T ss_pred cccc-CCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEE
Confidence 9999 99999999999999887765555578899999999997777541 22333333333333333433333333 33
Q ss_pred eecCCeeEEEeeecCCC-CCCCHHHHHHHHH---HhcCeEEECCCCC
Q 013883 391 VFPSSGTYFVVVDHTPF-GHETDIAFCEYLI---KEVGVVAIPTSVF 433 (434)
Q Consensus 391 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ll---~~~GV~v~pG~~F 433 (434)
.+.+.|. ++++.+.+. ...++.+++.++. .++||.+.||+.|
T Consensus 345 ~vrg~G~-~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f 390 (420)
T TIGR00700 345 DVRGLGA-MIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF 390 (420)
T ss_pred Eeeccce-EEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC
Confidence 4455554 555544221 0111223333333 3569999998765
No 215
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=6.2e-20 Score=181.29 Aligned_cols=210 Identities=13% Similarity=0.118 Sum_probs=159.4
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH----HHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~ 223 (434)
...|+++++++.+ .+ ++++++|+++++.+++.+++++||.|++++|.|.+.... ....|++++.++.
T Consensus 55 ~~~Le~~lA~leg--------~e-~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 125 (388)
T PRK08861 55 RGLLEQTLSELES--------GK-GAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ 125 (388)
T ss_pred HHHHHHHHHHHhC--------CC-eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC
Confidence 5678888888876 45 899999999999999999999999999999999974433 2335677777642
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
.|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+. . ++ . .
T Consensus 126 ------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~-~--pl-~----~ 188 (388)
T PRK08861 126 ------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ-K--PL-E----L 188 (388)
T ss_pred ------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC-C--Cc-c----c
Confidence 3789999999989999999999999999996 556888899999999999999864332 1 11 1 1
Q ss_pred CceEEEccCChhhcc-ccceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSL-TGWKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~-~G~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+-.+++.|++|.++- .+...|+++++ +++.+.++..+.......++...+.+...|+. +.-..++..++...+.
T Consensus 189 GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T----l~lR~~~~~~~a~~~a 264 (388)
T PRK08861 189 GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRT----LGARMRVHEESAQQIL 264 (388)
T ss_pred CCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCC----HHHHHHHHHHHHHHHH
Confidence 234899999999863 34678998875 56767777766666666677766665555554 3334455566677777
Q ss_pred HHhhhC
Q 013883 382 EGLNAV 387 (434)
Q Consensus 382 ~~L~~~ 387 (434)
+.|++.
T Consensus 265 ~~L~~~ 270 (388)
T PRK08861 265 AYLQTQ 270 (388)
T ss_pred HHHHhC
Confidence 777764
No 216
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.86 E-value=2.4e-19 Score=178.77 Aligned_cols=308 Identities=17% Similarity=0.152 Sum_probs=199.3
Q ss_pred cCCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|.- .+. .+|.+.+++.+++....+.+ .... .+...++++.+.+..+. .+ .+++++++++|++
T Consensus 39 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~~~-~~~~~~la~~L~~~~~~---~~-~v~f~~sGseA~e 112 (408)
T PRK04612 39 GREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTS-NVFY-SAPPLKLAEELVTASRF---AE-KVFLCNSGTEANE 112 (408)
T ss_pred CCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccc-cccC-CHHHHHHHHHHHhhCCC---CC-EEEEcCchHHHHH
Confidence 335788876632 222 36778889988887643222 2112 24455667776654321 24 7999999999999
Q ss_pred HHHHHccC--------CC-CeEEEcCCCchhHHHHHHH-cCCEEEEEEcC--CCC----CCCCHHHHHhhcccCCcEEEe
Q 013883 185 ATILGLIN--------PG-DEVILFAPFYDSYEATLSM-AGAKIKCITLR--PPD----FAIPIEELKSTISKNTRAILM 248 (434)
Q Consensus 185 ~~~~~l~~--------~g-d~Vlv~~p~y~~~~~~~~~-~G~~~~~v~~~--~~~----~~~d~~~l~~~i~~~~~~i~~ 248 (434)
.+++.... ++ ++|+.....|++....... .|.....-++. ..+ ...|++.+++++..+..+.++
T Consensus 113 ~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi 192 (408)
T PRK04612 113 AAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVM 192 (408)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEE
Confidence 99876431 12 4688888888886544332 22211110010 001 112789999988766777777
Q ss_pred cCCCCCcccCCC--HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeE
Q 013883 249 NTPHNPTGKMFT--REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWA 326 (434)
Q Consensus 249 ~~p~NPTG~~~~--~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~ 326 (434)
..|.+++|-+++ .+.+++|.++|++||+++|+||+|.+|.+.|...... ..+.+..+.+|||.+| +|+|+||+
T Consensus 193 ~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~----~~~~~pdi~t~~K~l~-~G~piga~ 267 (408)
T PRK04612 193 LEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHW----QEQVTPDIVTLAKALG-GGFPIGAM 267 (408)
T ss_pred ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhh----hcCCCCCEEEEcchhc-CCCceEEE
Confidence 889888876554 6789999999999999999999999887655432221 1234556889999999 99999999
Q ss_pred EeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----CCE-eecCCeeEEEe
Q 013883 327 IAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----GFK-VFPSSGTYFVV 401 (434)
Q Consensus 327 ~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~-~~~~~~~~~~~ 401 (434)
++++++.+.+.......+++.+++.+.++.++|+..++ +++.++.+++.+++.+.|+++ ++- .+...|. ++-
T Consensus 268 ~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl-~~~ 344 (408)
T PRK04612 268 LAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS--PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGL-MLG 344 (408)
T ss_pred EECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccce-EEE
Confidence 99998887776555556788899999999998876322 244556666666666666553 322 2344444 434
Q ss_pred eecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 402 VDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 402 ~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+.+.+.......++++.+. ++||++.|.
T Consensus 345 i~~~~~~~~~a~~i~~~l~-~~Gvlv~~~ 372 (408)
T PRK04612 345 AVLAPAHAGQAGAILDLAA-EHGLLLLQA 372 (408)
T ss_pred EEecCchhhHHHHHHHHHH-HCCeEEeeC
Confidence 4442211112445666665 469999874
No 217
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.86 E-value=3.3e-19 Score=177.28 Aligned_cols=289 Identities=15% Similarity=0.144 Sum_probs=196.1
Q ss_pred CeeEeCCC-CCCCCCcHHHHHHHHHHHHcCCCCCC---CCCCc----HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQG-FPNFDGPDFVKDAAIQAIRDGKNQYA---RGHGV----PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~~~~Y~---~~~G~----~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
..++|+.. |.++...|.+++++.+++++-..+-. -..|. .+|+++++++++ .+ ..++.+++..
T Consensus 103 ~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g--------~e-~all~sSGy~ 173 (476)
T PLN02955 103 KLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKK--------KE-DCLVCPTGFA 173 (476)
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHC--------CC-cEEEECChHH
Confidence 57999886 99999999999999999876211111 12243 567888888776 34 4556666677
Q ss_pred HHHHHHHHc--------------cCCCCeEEEcCCCchhHHHHHHHc----CCEEEEEEcCCCCCCCCHHHHHhhccc--
Q 013883 182 AIAATILGL--------------INPGDEVILFAPFYDSYEATLSMA----GAKIKCITLRPPDFAIPIEELKSTISK-- 241 (434)
Q Consensus 182 ai~~~~~~l--------------~~~gd~Vlv~~p~y~~~~~~~~~~----G~~~~~v~~~~~~~~~d~~~l~~~i~~-- 241 (434)
|...++.++ .+++|.|+...-.|....+.++.. +++++.++.. |++.|++.++.
T Consensus 174 AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN------D~~~Le~~L~~~~ 247 (476)
T PLN02955 174 ANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC------DMYHLNSLLSSCK 247 (476)
T ss_pred HHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC------CHHHHHHHHHhCC
Confidence 777777766 245667888888899999988887 5777777655 78889888754
Q ss_pred -CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCcccc-CCCCCCCceEEEccCChhhccc
Q 013883 242 -NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIA-SLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~-~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
+.++|++....++.|.+.+ +++|.++|++||+++|+||+|..+.++....... .+....+.+++++||||.+|..
T Consensus 248 ~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~ 324 (476)
T PLN02955 248 MKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH 324 (476)
T ss_pred CCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc
Confidence 3455566666899999887 6668888899999999999999888775433322 2222357789999999999866
Q ss_pred cceeeeEEeChhhHHHHHHHhhccccCCchH--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCee
Q 013883 320 GWKIGWAIAPPHLTWGVRQAHSFLTFATSTP--MQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGT 397 (434)
Q Consensus 320 G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~--~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 397 (434)
| ||+++++++++.++...+...|+.+.+ ...++.++|+.... ....+++++++.+++++. .|+.+ ...
T Consensus 325 G---Gfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~-~~~~r~~L~~n~~~fr~~---~G~~~---~sP 394 (476)
T PLN02955 325 G---GFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK-EKWRRKAIWERVKEFKAL---SGVDI---SSP 394 (476)
T ss_pred C---ceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHh---cCCCC---CCC
Confidence 6 999999999988887666555544333 33344444432111 123567777787777773 35553 122
Q ss_pred EEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 398 YFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
++.+.+. ......+++++|+++ ||++.+-
T Consensus 395 -I~pI~ig--~~~~a~~~~~~L~~~-Gi~v~~i 423 (476)
T PLN02955 395 -IISLVVG--NQEKALKASRYLLKS-GFHVMAI 423 (476)
T ss_pred -EEEEEeC--CHHHHHHHHHHHHHC-CCEEEEE
Confidence 2222221 111345678888765 9998863
No 218
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.86 E-value=7.7e-19 Score=174.56 Aligned_cols=275 Identities=18% Similarity=0.198 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCCC
Q 013883 125 DFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-INPGDEVILFAPF 203 (434)
Q Consensus 125 ~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p~ 203 (434)
+...+++.+++..+. |....+..+|+++++++++ .+ +.++++|+++|+.+++.++ +++||+|+++.|+
T Consensus 10 ~~~~~~v~~~~~~~~--~~~g~~~~~le~~la~~~g--------~~-~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~ 78 (380)
T TIGR03588 10 QDDIDAVVEVLKSDF--LTQGPTVPAFEEALAEYVG--------AK-YAVAFNSATSALHIACLALGVGPGDRVWTTPIT 78 (380)
T ss_pred HHHHHHHHHHHhcCC--ccCChhHHHHHHHHHHHHC--------CC-eEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcc
Confidence 334666777776653 3334457899999999987 23 4566667899999999998 8999999999999
Q ss_pred chhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEE
Q 013883 204 YDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVF 279 (434)
Q Consensus 204 y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI 279 (434)
|..+...+...|++++.++++++++.+|++.++++++ +++++|++ .|++|... ++++|.++|++||++||
T Consensus 79 ~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~---~~~~i~~l~~~~~~~lI 152 (380)
T TIGR03588 79 FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSV---DMQAIAALAKKHGLKII 152 (380)
T ss_pred hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccC---CHHHHHHHHHHcCCEEE
Confidence 9999999999999999999987678899999999998 68888885 45689776 47779999999999999
Q ss_pred EcCcCCccc-cCCCCccccCCCCCCCceEEEccCC--hhhccccceeeeEEeC-hhhHHHHHHHhhccc-----------
Q 013883 280 SDEVYDKLA-FEMDHISIASLPGMYERTVTMNSLG--KTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLT----------- 344 (434)
Q Consensus 280 ~Deay~~~~-~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~----------- 344 (434)
+|+++.... +++.. +... ... .+.+.||+ |.++. | ..|+++.+ +++.++++..+....
T Consensus 153 ~D~a~a~g~~~~~~~--~g~~-~~~--d~~~~S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 225 (380)
T TIGR03588 153 EDASHALGAEYGGKP--VGNC-RYA--DATVFSFHPVKIITT-A-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQD 225 (380)
T ss_pred EECCCcccCccCCEe--CCCc-ccc--ceEEEecCCCCcccc-c-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccc
Confidence 999998643 33322 1111 112 36666765 88863 3 46766664 667776665443211
Q ss_pred --------------cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC-CEeecC-C---eeEEEe-eec
Q 013883 345 --------------FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG-FKVFPS-S---GTYFVV-VDH 404 (434)
Q Consensus 345 --------------~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~---~~~~~~-~~~ 404 (434)
+..+.+........|+. +++..++-+++.+++.+.|.+++ +....+ . ..++.+ +.+
T Consensus 226 ~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~----l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 301 (380)
T TIGR03588 226 EGPWYYEQQELGFNYRMTDIQAALGLSQLKK----LDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILL 301 (380)
T ss_pred cCcceeeeeccccccCccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEE
Confidence 01111212222222332 45555666677778888887763 333222 1 122222 223
Q ss_pred CC-CCCCCHHHHHHHHHHhcCeEEEC
Q 013883 405 TP-FGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 405 ~~-~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
.. .+ .+..++.+.|. +.||.+.+
T Consensus 302 ~~~~~-~~r~~l~~~L~-~~gI~~~~ 325 (380)
T TIGR03588 302 DQEFG-CTRKEVFEALR-AAGIGVQV 325 (380)
T ss_pred CCcCC-CCHHHHHHHHH-HCCCCccc
Confidence 21 12 24677888775 56998864
No 219
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.85 E-value=8.4e-19 Score=172.42 Aligned_cols=270 Identities=19% Similarity=0.190 Sum_probs=184.0
Q ss_pred HHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCCCchhH
Q 013883 129 DAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-INPGDEVILFAPFYDSY 207 (434)
Q Consensus 129 ~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p~y~~~ 207 (434)
+++.+.+.++.. .......++++.++++++ .+ ++++++|+++++..++.++ ..+||+|+++.++|..+
T Consensus 3 ~~~~~~~~~~~~--~~~~~~~~~~~~la~~~~--------~~-~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~ 71 (352)
T cd00616 3 EAVEEVLDSGWL--TLGPKVREFEKAFAEYLG--------VK-YAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT 71 (352)
T ss_pred HHHHHHHHcCCc--cCCHHHHHHHHHHHHHhC--------CC-eEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence 345566665443 223356789999999886 34 5777888899999999998 68999999999999999
Q ss_pred HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCcc
Q 013883 208 EATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKL 287 (434)
Q Consensus 208 ~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~ 287 (434)
...+...|++++.+++++.++.+|++.+++.+++++++|+++ |++|...+ +++|.++|+++|+++|+|++|...
T Consensus 72 ~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g 145 (352)
T cd00616 72 ANAILLLGATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALG 145 (352)
T ss_pred HHHHHHcCCeEEEEecCCCcCCcCHHHHHHhcCcCCeEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCC
Confidence 999999999999999976578899999999998899999875 47998774 667888899999999999999754
Q ss_pred ccCCCCccccCCCCCCCceEEEccCC--hhhccccceeeeEEeC-hhhHHHHHHHhhccc---------------cCCch
Q 013883 288 AFEMDHISIASLPGMYERTVTMNSLG--KTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLT---------------FATST 349 (434)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~---------------~~~~~ 349 (434)
.... ...+..+ ..+.+.||+ |.++ +.+.|+++.+ +++.++++....... +..+.
T Consensus 146 ~~~~-~~~~~~~-----~d~~~~S~~~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (352)
T cd00616 146 ATYK-GRKVGTF-----GDAGAFSFHPTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSE 217 (352)
T ss_pred CeEC-CEEcccC-----cceeEEcCCCCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCH
Confidence 3211 1111111 125667766 8774 4457888876 577777765543221 11122
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCe----e-EEEeeecCCCCCCCHHHHHHHHHHhc
Q 013883 350 PMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSG----T-YFVVVDHTPFGHETDIAFCEYLIKEV 423 (434)
Q Consensus 350 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~Ll~~~ 423 (434)
....++...+ +.+++..++.+++.+++++.|.++ |+++..+.. . +.+.+.+......+..++.+.|.+ .
T Consensus 218 ~~aa~~~~~l----~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~-~ 292 (352)
T cd00616 218 IQAAIGLAQL----EKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKE-A 292 (352)
T ss_pred HHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHH-C
Confidence 2222222222 235666677788888999999885 777653321 1 222333321112357788888754 5
Q ss_pred CeEEE
Q 013883 424 GVVAI 428 (434)
Q Consensus 424 GV~v~ 428 (434)
||.+.
T Consensus 293 gI~~~ 297 (352)
T cd00616 293 GIETR 297 (352)
T ss_pred CCCee
Confidence 99664
No 220
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.85 E-value=3.5e-20 Score=177.62 Aligned_cols=221 Identities=18% Similarity=0.174 Sum_probs=152.2
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP- 226 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~- 226 (434)
+.++++.++++++ .++.+++++|+++++..++.+++++||+|+++.|+|.+....+...|++++.++.+.+
T Consensus 61 i~~~~~~~A~~~g--------a~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 61 IKEAQELAARAFG--------AKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNP 132 (294)
T ss_pred HHHHHHHHHHHhC--------CCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCc
Confidence 6678888888876 2325666999999999999999999999999999999999999999999998877542
Q ss_pred C----CCCCHHHHHhhccc--CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCc-cccCCCCccccCC
Q 013883 227 D----FAIPIEELKSTISK--NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDK-LAFEMDHISIASL 299 (434)
Q Consensus 227 ~----~~~d~~~l~~~i~~--~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~-~~~~~~~~~~~~~ 299 (434)
+ +.+|++.+++++++ +++++++++| |++|.+++ +++|+++|+++|+++|+||+|.. +.+.+..+ ...
T Consensus 133 ~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~-~~~- 206 (294)
T cd00615 133 YYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILP-SSA- 206 (294)
T ss_pred ccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccC-cch-
Confidence 2 37899999999964 6889999998 79999985 67799999999999999999974 33433211 111
Q ss_pred CCCCCceEEEccCChhhccccceee-eEEeChhh--HHHHHHHhh-ccccCCchHHHHHHHHHHhCChHHHHHHHHHHHH
Q 013883 300 PGMYERTVTMNSLGKTFSLTGWKIG-WAIAPPHL--TWGVRQAHS-FLTFATSTPMQWAATAALRAPETYYEELKRDYSA 375 (434)
Q Consensus 300 ~~~~~~~i~i~S~SK~~g~~G~R~G-~~~~~~~~--~~~l~~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~ 375 (434)
...+.++++.|++|.+ +|++.| +++.+.+. ..++..... ..+.+++.+...++..++....+.-++..+++.+
T Consensus 207 -~~~~~div~~S~hK~l--~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~ 283 (294)
T cd00615 207 -AMAGADIVVQSTHKTL--PALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIE 283 (294)
T ss_pred -hhcCCcEEEEchhccc--chHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 1235679999999986 577764 44454432 223333222 1223333333333333333211222334455556
Q ss_pred HHHHHHHHhh
Q 013883 376 KKAILVEGLN 385 (434)
Q Consensus 376 ~~~~l~~~L~ 385 (434)
+.+.+++.|.
T Consensus 284 ~~~~~r~~l~ 293 (294)
T cd00615 284 LALYARQEIN 293 (294)
T ss_pred HHHHHHHHHh
Confidence 6666666554
No 221
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.3e-19 Score=173.10 Aligned_cols=298 Identities=18% Similarity=0.195 Sum_probs=206.7
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCC---CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGK---NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
+...|||..|. ..+. .+|.+.+++.++++.-. +.|. .+.+.++++.|.+..+ ..+ .++++|+++|
T Consensus 41 G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s~---~~d-~vff~NSGaE 111 (404)
T COG4992 41 GREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELSP---FAD-RVFFCNSGAE 111 (404)
T ss_pred CCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhCc---ccc-EEEEcCCcHH
Confidence 34678987773 3333 37888889988876632 2222 2446666666665443 145 8999999999
Q ss_pred HHHHHHHHcc---C-C-CCeEEEcCCCchhHHHHHHHcCCE-------------EEEEEcCCCCCCCCHHHHHhhcccCC
Q 013883 182 AIAATILGLI---N-P-GDEVILFAPFYDSYEATLSMAGAK-------------IKCITLRPPDFAIPIEELKSTISKNT 243 (434)
Q Consensus 182 ai~~~~~~l~---~-~-gd~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~d~~~l~~~i~~~~ 243 (434)
|++.++.... . + ..+|+.....|++-....-.++.+ +..+|+. |++.++++++++|
T Consensus 112 A~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn------Di~al~~ai~~~t 185 (404)
T COG4992 112 ANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN------DIEALEAAIDEDT 185 (404)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC------CHHHHHHHhccCe
Confidence 9999987652 2 2 247888888877643332222222 3334433 8999999999999
Q ss_pred cEEEecCCCCCcccCCC-HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccce
Q 013883 244 RAILMNTPHNPTGKMFT-REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWK 322 (434)
Q Consensus 244 ~~i~~~~p~NPTG~~~~-~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R 322 (434)
.+|++...+-..|++++ .+.++++.++|++||+++|.||++.++...|+.+....+.-.+| |.++.|.+| .|+.
T Consensus 186 aAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PD----I~tlaK~Lg-GG~P 260 (404)
T COG4992 186 AAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPD----ILTLAKALG-GGFP 260 (404)
T ss_pred EEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCC----EEEeecccc-CCcc
Confidence 99999888999999665 45599999999999999999999999988887766665544455 777899999 9999
Q ss_pred eeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----C-CEeecCCee
Q 013883 323 IGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----G-FKVFPSSGT 397 (434)
Q Consensus 323 ~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g-~~~~~~~~~ 397 (434)
+|.+++.+.+.+.+..-....+|+.++++.+++.++|+... -+++.++.+++-++|.+.|+++ + +.-+... |
T Consensus 261 igA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~--~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~-G 337 (404)
T COG4992 261 IGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLL--EEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGR-G 337 (404)
T ss_pred ceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHc--chhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecc-e
Confidence 99999986666656655566789999999999988888531 1234445555566666666554 3 2222333 4
Q ss_pred EEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 398 YFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+++=+.+.+.. ...++++.+.++ ||.+.+..
T Consensus 338 LmiGiel~~~~--~a~~~~~~~~~~-gvL~~~a~ 368 (404)
T COG4992 338 LMIGIELKEPY--RARDIVRALREE-GVLVLPAG 368 (404)
T ss_pred eEEEEEecCcc--cHHHHHHHHHHC-CeEEecCC
Confidence 44445553311 256788888665 99987743
No 222
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.85 E-value=5.2e-19 Score=179.16 Aligned_cols=315 Identities=14% Similarity=0.110 Sum_probs=188.6
Q ss_pred cCCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|.- .+. .+|.+.+++.+++++..+..... -..+.+..+++.+....+... .+ .+++++++++|++
T Consensus 53 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~-~~~~~~~~la~~L~~~~p~~~-~~-~v~f~~sGseA~e 129 (451)
T PRK06918 53 GNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNV-MMYEPYIELAEKLAALAPGSF-DK-KVLFLNSGAEAVE 129 (451)
T ss_pred CCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccc-cccHHHHHHHHHHHHhCCCCC-CC-EEEEcCCcHHHHH
Confidence 345788876632 222 36778899999887643211111 123455667777765443211 14 7999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHHc-CC-------------EEEEEEcCCC---CCCCC--------HHHHHh
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSMA-GA-------------KIKCITLRPP---DFAIP--------IEELKS 237 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~---~~~~d--------~~~l~~ 237 (434)
.+++... ....+|+.....|++........ |. .+..+|+... ..+.. ++.+++
T Consensus 130 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (451)
T PRK06918 130 NAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKN 209 (451)
T ss_pred HHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHH
Confidence 9987553 23457888888888865543332 21 1222332210 01111 123333
Q ss_pred hc----ccCCcEEEecCCCCCc-ccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEcc
Q 013883 238 TI----SKNTRAILMNTPHNPT-GKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNS 311 (434)
Q Consensus 238 ~i----~~~~~~i~~~~p~NPT-G~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S 311 (434)
.+ ..+..+.++..|.+.. |.++ +.+.+++|.++|++||+++|+||+|.+|.+.+...++..+...+| +.|
T Consensus 210 ~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pD----i~t 285 (451)
T PRK06918 210 FFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPD----LIT 285 (451)
T ss_pred HHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCC----EEe
Confidence 33 2233444455664444 6644 555599999999999999999999999987765444444432333 558
Q ss_pred CChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh----C
Q 013883 312 LGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA----V 387 (434)
Q Consensus 312 ~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~----~ 387 (434)
|||.++ +|+|+||+++++++.+.+.......+++.+++.+.++.++|+..++ ....++.+++.+.+.+.|++ .
T Consensus 286 ~sK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~l~~l~~~~ 362 (451)
T PRK06918 286 VSKSLG-AGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEK--ENLNDRAIELGKVVMNRFEEMKNKY 362 (451)
T ss_pred eehhhc-CCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999 9999999999999988776555567889999999997777763210 11122223333333333332 3
Q ss_pred C-CEeecCCeeEEEeeecCCC--CCC---CHHHHHHHHHHhcCeEEECCCCC
Q 013883 388 G-FKVFPSSGTYFVVVDHTPF--GHE---TDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 388 g-~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+ +..+...|.|+.|....+. ... ....+.+.++ ++||.+.|+..|
T Consensus 363 ~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~Gvlv~~~~~~ 413 (451)
T PRK06918 363 NCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEAN-KRGLLLLSAGTY 413 (451)
T ss_pred CCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHH-HCCeEEeecCCC
Confidence 2 2334567888776543111 010 1233444444 569999997643
No 223
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.85 E-value=3.4e-19 Score=175.63 Aligned_cols=212 Identities=17% Similarity=0.181 Sum_probs=155.4
Q ss_pred CCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCC
Q 013883 141 QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGA 216 (434)
Q Consensus 141 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~ 216 (434)
+|+. ....+|+++++++.. ++ .+++ +++++++..++.+++++||+|++++|.|+.+...+ ...|+
T Consensus 47 ry~~-p~~~~Le~~lA~l~~--------~~-~v~~-~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~ 115 (366)
T PRK07582 47 RASN-PTWRALEAALGELEG--------AE-ALVF-PSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGV 115 (366)
T ss_pred CCCC-ccHHHHHHHHHHHcC--------CC-EEEE-CCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeE
Confidence 4443 356889999998761 33 4555 55568999999999999999999999999887654 45799
Q ss_pred EEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccc
Q 013883 217 KIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISI 296 (434)
Q Consensus 217 ~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~ 296 (434)
+++.++.++. .+ .+.+++++|++++|+||||.+. ++++|+++|+++|+++|+|++|.... + ..++
T Consensus 116 ~v~~v~~~~~-----~~----~~~~~t~lV~le~p~NPtg~v~---di~~I~~~a~~~g~~lvVD~t~~~~~-~--~~p~ 180 (366)
T PRK07582 116 TVREAPTAGM-----AE----AALAGADLVLAETPSNPGLDVC---DLAALAAAAHAAGALLVVDNTTATPL-G--QRPL 180 (366)
T ss_pred EEEEECCCCh-----HH----HhccCceEEEEECCCCCCCCcc---CHHHHHHHHHHcCCEEEEECCCCCcc-c--cCch
Confidence 9998887531 11 2335789999999999999776 57889999999999999999996321 1 1111
Q ss_pred cCCCCCCCceEEEccCChhh-ccccceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHH
Q 013883 297 ASLPGMYERTVTMNSLGKTF-SLTGWKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYS 374 (434)
Q Consensus 297 ~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 374 (434)
.+ +..+++.|++|.+ |.+|.|+||++++ +++++.++..+......+++...+.+...|+. ++...++..
T Consensus 181 -~~----g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t----l~~R~~~~~ 251 (366)
T PRK07582 181 -EL----GADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGT----LGLRFARQC 251 (366)
T ss_pred -hc----CCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc----HHHHHHHHH
Confidence 11 2237889999998 4567899999984 77888888777666666677777666666664 333446666
Q ss_pred HHHHHHHHHhhhC
Q 013883 375 AKKAILVEGLNAV 387 (434)
Q Consensus 375 ~~~~~l~~~L~~~ 387 (434)
++...+.+.|++.
T Consensus 252 ~na~~la~~L~~~ 264 (366)
T PRK07582 252 ANALAVAELLAGH 264 (366)
T ss_pred HHHHHHHHHHHhC
Confidence 7777888888765
No 224
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.85 E-value=5.5e-19 Score=174.33 Aligned_cols=217 Identities=15% Similarity=0.187 Sum_probs=159.0
Q ss_pred CCCCCCCCc---HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH----HH
Q 013883 140 NQYARGHGV---PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LS 212 (434)
Q Consensus 140 ~~Y~~~~G~---~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~ 212 (434)
+.|+. .|. ..|+++++++.+ .+ ++++++|+++|+..++.+++++||+|++++|.|+..... +.
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~g--------~~-~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~ 111 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELEG--------GA-GCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLK 111 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHhC--------CC-cEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHH
Confidence 45664 344 478888888765 34 688999999999999999999999999999999876543 45
Q ss_pred HcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC
Q 013883 213 MAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD 292 (434)
Q Consensus 213 ~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~ 292 (434)
..|+++..++.. +.+.+++++++++|+|++++|+||+|.+. ++++|+++|+++|+++|+|++|...... .
T Consensus 112 ~~gi~v~~~d~~------~~e~l~~~i~~~tklV~lesp~Np~g~~~---dl~~I~~la~~~g~~livD~t~a~g~~~-~ 181 (377)
T TIGR01324 112 RMGVDITYYDPL------IGEDIATLIQPNTKVLFLEAPSSITFEIQ---DIPAIAKAARNPGIVIMIDNTWAAGLLF-K 181 (377)
T ss_pred hcCcEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCCcHH---HHHHHHHHHHHcCCEEEEECCCcccccc-C
Confidence 678888776432 23789999999999999999999998765 7889999999999999999999764321 1
Q ss_pred CccccCCCCCCCceEEEccCChhhc-cccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHH
Q 013883 293 HISIASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKR 371 (434)
Q Consensus 293 ~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~ 371 (434)
+ + ..+..+++.|++|.++ .++...|+++++++.++.++..........++...+.+...|+. +....+
T Consensus 182 --p---l--~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t----l~~R~~ 250 (377)
T TIGR01324 182 --P---L--EHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRT----LGVRLK 250 (377)
T ss_pred --c---c--ccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh----HHHHHH
Confidence 1 1 2345689999999995 33467899999988877776544433444455444444444442 334455
Q ss_pred HHHHHHHHHHHHhhhC
Q 013883 372 DYSAKKAILVEGLNAV 387 (434)
Q Consensus 372 ~~~~~~~~l~~~L~~~ 387 (434)
+..++...+.+.|++.
T Consensus 251 ~~~~~a~~la~~L~~~ 266 (377)
T TIGR01324 251 QHQESSLAIAKWLSEQ 266 (377)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 5666666677777654
No 225
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=2e-19 Score=178.25 Aligned_cols=210 Identities=17% Similarity=0.140 Sum_probs=154.7
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH---HcCCEEEEEEc
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS---MAGAKIKCITL 223 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~G~~~~~v~~ 223 (434)
...+|++.++++++ .+ ++++++|+++|+..++.+++++||+|+++.|.|..+...++ ..|+++..+.
T Consensus 54 ~~~~lE~~lA~l~g--------~~-~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~- 123 (385)
T PRK08574 54 TLRPLEEALAKLEG--------GV-DALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY- 123 (385)
T ss_pred cHHHHHHHHHHHhC--------CC-cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-
Confidence 46789999999886 34 57778888999999999999999999999999999877664 4577776542
Q ss_pred CCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC
Q 013883 224 RPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM 302 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~ 302 (434)
+|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... . .+ .
T Consensus 124 ------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~-~--~l-----~ 186 (385)
T PRK08574 124 ------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY-R--PL-----R 186 (385)
T ss_pred ------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC-C--hh-----h
Confidence 367899999988 8999999999999999996 567899999999999999999643211 1 11 1
Q ss_pred CCceEEEccCChhhccccce-eeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 303 YERTVTMNSLGKTFSLTGWK-IGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 303 ~~~~i~i~S~SK~~g~~G~R-~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
.+..+++.|++|.++-+|-. .|++++ ++++.++++..+.......++...+.+...|+. +....++..++...+
T Consensus 187 ~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t----L~~R~~~~~~na~~l 262 (385)
T PRK08574 187 HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT----LEVRFERQCRNAMAI 262 (385)
T ss_pred hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc----HHHHHHHHHHHHHHH
Confidence 23468999999999755544 475555 677878777666654445555544444444443 344445556666777
Q ss_pred HHHhhhC
Q 013883 381 VEGLNAV 387 (434)
Q Consensus 381 ~~~L~~~ 387 (434)
.+.|++.
T Consensus 263 a~~L~~~ 269 (385)
T PRK08574 263 AEFLSEH 269 (385)
T ss_pred HHHHHcC
Confidence 7777654
No 226
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.84 E-value=3.3e-19 Score=175.24 Aligned_cols=227 Identities=16% Similarity=0.145 Sum_probs=165.0
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCE-EEEEEcCC
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAK-IKCITLRP 225 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~-~~~v~~~~ 225 (434)
...+|+++++++.+ .+ ++++++|+++|+.+++. ++++||+|+++.+.|......+.....+ -+.+
T Consensus 55 ~~~~le~~lA~leg--------~~-~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~---- 120 (364)
T PRK07269 55 TRAKLEETLAAIES--------AD-YALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHF---- 120 (364)
T ss_pred cHHHHHHHHHHHhC--------CC-eEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEE----
Confidence 45789999999875 45 79999999999999884 6799999999999998765544332111 0111
Q ss_pred CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCc
Q 013883 226 PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYER 305 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~ 305 (434)
++..|++.+++++++++|+|++++|+||||.+. ++++|+++|+++|+++|+|++|....+. .++. ..-
T Consensus 121 -~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~---~pl~-----~ga 188 (364)
T PRK07269 121 -TYANTEEELIAAIEEDTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQ---RPIE-----LGA 188 (364)
T ss_pred -EecCCHHHHHHhcCcCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC---Cchh-----hCC
Confidence 234589999999999999999999999999887 6778999999999999999997543221 1111 123
Q ss_pred eEEEccCChhhcccc-ceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 013883 306 TVTMNSLGKTFSLTG-WKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEG 383 (434)
Q Consensus 306 ~i~i~S~SK~~g~~G-~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~ 383 (434)
.+++.|++|.++-.| .=.|++++ ++++.++++..+.......+++..+.+...|+. ++...++..++...+.+.
T Consensus 189 Divv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t----L~~r~~~~~~na~~~a~~ 264 (364)
T PRK07269 189 DIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT----LSLRMERSTANAQEVVAF 264 (364)
T ss_pred cEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHHHHHH
Confidence 488999999996323 13578887 467777777655444455666666666666664 555666777788888888
Q ss_pred hhhC-CC-Ee-ecCCeeEEEeee
Q 013883 384 LNAV-GF-KV-FPSSGTYFVVVD 403 (434)
Q Consensus 384 L~~~-g~-~~-~~~~~~~~~~~~ 403 (434)
|++. ++ +| +|+.||++.|.-
T Consensus 265 L~~~p~v~~v~ypg~gg~~sf~~ 287 (364)
T PRK07269 265 LKKSPAVKEVLYTGKGGMISFKV 287 (364)
T ss_pred HHhCCCccEEeCCCcCcEEEEEE
Confidence 8875 32 34 488889877653
No 227
>PRK05939 hypothetical protein; Provisional
Probab=99.84 E-value=2.9e-18 Score=170.35 Aligned_cols=163 Identities=24% Similarity=0.335 Sum_probs=127.9
Q ss_pred CCCCCCCCcH---HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH---HHHH
Q 013883 140 NQYARGHGVP---EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA---TLSM 213 (434)
Q Consensus 140 ~~Y~~~~G~~---~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~ 213 (434)
+.|... |.+ +|++.++++.+ .+..+++++ +++|+..++.+++++||+|+++++.|+.+.. .+..
T Consensus 39 ~~Y~r~-g~p~~~~lE~~la~leg--------~~~~v~~ss-G~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~ 108 (397)
T PRK05939 39 FTYARQ-GTPTTAALEAKITKMEG--------GVGTVCFAT-GMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRG 108 (397)
T ss_pred CCcCCC-CCHHHHHHHHHHHHHhC--------CCeEEEeCC-HHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHh
Confidence 345543 545 77777777665 232455555 5899999999999999999999999986543 4667
Q ss_pred cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC
Q 013883 214 AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDH 293 (434)
Q Consensus 214 ~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~ 293 (434)
.|++++.++.. |++.+++++++++++|++++|+||||.+. ++++|+++|+++|+++|+|++|....
T Consensus 109 ~G~~v~~v~~~------d~e~l~~~l~~~tklV~vesp~NptG~v~---dl~~I~~la~~~gi~livD~t~a~~~----- 174 (397)
T PRK05939 109 LGVEVTMVDAT------DVQNVAAAIRPNTRMVFVETIANPGTQVA---DLAGIGALCRERGLLYVVDNTMTSPW----- 174 (397)
T ss_pred cCCEEEEECCC------CHHHHHHhCCCCCeEEEEECCCCCCCCHH---hHHHHHHHHHHcCCEEEEECCccccc-----
Confidence 89999888753 78999999999999999999999999885 78899999999999999999986421
Q ss_pred ccccCCCCCCCceEEEccCChhhccccceeeeEEeC
Q 013883 294 ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 294 ~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
.+... ..+..+++.|++|.++..|.++|+++..
T Consensus 175 -~~~~~--~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 175 -LFRPK--DVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred -ccCcc--ccCCEEEEecCeecccCCCCeEEEEEec
Confidence 01111 1246789999999998889999998874
No 228
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=1.9e-18 Score=174.15 Aligned_cols=308 Identities=15% Similarity=0.116 Sum_probs=190.4
Q ss_pred CCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..|. ..+. .+|.+.+++.+++.+..+ +.......+.+.++++.+.+..+.. -+ .+++++++++|++.
T Consensus 41 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~~~~~~~~la~~L~~~~p~~--~~-~v~f~~sGsEAve~ 116 (443)
T PRK08360 41 NEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIH-YTPIYGFPVEPLLLAEKLIEIAPGD--NP-KVSFGLSGSDANDG 116 (443)
T ss_pred CEEEEccccHhhcccCCCCHHHHHHHHHHHHhccC-ccccccCcHHHHHHHHHHHHhCCCC--CC-EEEEcCCHHHHHHH
Confidence 3578887662 2222 367788899988876422 2222222345566777776544321 23 79999999999999
Q ss_pred HHHHcc--CCCCeEEEcCCCchhHHHH-HHHcCC------------EEEEEEcCCC---CCC--------CCHHHHHhhc
Q 013883 186 TILGLI--NPGDEVILFAPFYDSYEAT-LSMAGA------------KIKCITLRPP---DFA--------IPIEELKSTI 239 (434)
Q Consensus 186 ~~~~l~--~~gd~Vlv~~p~y~~~~~~-~~~~G~------------~~~~v~~~~~---~~~--------~d~~~l~~~i 239 (434)
+++... .....|+.....|++.... +...|. .+..+|+... .+. .+++.+++.+
T Consensus 117 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (443)
T PRK08360 117 AIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKF 196 (443)
T ss_pred HHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHH
Confidence 987653 2345788888888775432 222221 1333333210 011 1244455655
Q ss_pred c-----cCCcEEEecCCCCCcccCCC-HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCC
Q 013883 240 S-----KNTRAILMNTPHNPTGKMFT-REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLG 313 (434)
Q Consensus 240 ~-----~~~~~i~~~~p~NPTG~~~~-~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~S 313 (434)
. +++++|++...+||+|.+++ .+.+++|.++|++||+++|+||+|.+|.+.+.......+.-.+| +.++|
T Consensus 197 ~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pD----iitls 272 (443)
T PRK08360 197 EGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPD----IITLG 272 (443)
T ss_pred HhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCC----EEEec
Confidence 3 35677777655799999877 55799999999999999999999999877665433333322233 33789
Q ss_pred hhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh----CCC
Q 013883 314 KTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA----VGF 389 (434)
Q Consensus 314 K~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~ 389 (434)
|.++ +|+|+||+++++++++.+.......+++.+++.+.++.++|+..++ +++.++.+++-+++++.|++ .++
T Consensus 273 K~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~ 349 (443)
T PRK08360 273 KPLG-GGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE--KNLLKRAEKLGNYTKKRLEEMKKKHEL 349 (443)
T ss_pred cccc-CCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999 9999999999999988886554455778888889999888876321 12344444454555555443 332
Q ss_pred -EeecCCeeEEEeeecCCCC------CCCHHHHHHHHHHhcCeEEEC
Q 013883 390 -KVFPSSGTYFVVVDHTPFG------HETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 390 -~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Ll~~~GV~v~p 429 (434)
..+...|-++ -+.+.... ......++.++++ +||.+.+
T Consensus 350 v~~vrg~Gl~~-gie~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~ 394 (443)
T PRK08360 350 IGDVRGIGLMI-GVDLVKDRETKERAYEEAAKVVWRAWE-LGLIVTF 394 (443)
T ss_pred eeeeeccceEE-EEEEecCCcccCccHHHHHHHHHHHHH-CCeEEee
Confidence 2233444443 33332110 0112356666765 5999875
No 229
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.83 E-value=1.8e-17 Score=166.68 Aligned_cols=203 Identities=16% Similarity=0.168 Sum_probs=146.5
Q ss_pred eEeCCCCCCCCCc-----HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 112 INLGQGFPNFDGP-----DFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 112 i~l~~g~p~~~~~-----~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..|+.|.|+.+.. ....+++.+.+..+...+++ -..+|+++++++++ .+ ++++++|+++++.++
T Consensus 26 ~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~~~G~--~~~~fe~~lA~~~g--------~~-~~v~~~sGt~al~~a 94 (438)
T PRK15407 26 KPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWLTTGR--FNDAFEKKLAEFLG--------VR-YALLVNSGSSANLLA 94 (438)
T ss_pred ccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcccCCh--hHHHHHHHHHHHhC--------CC-eEEEECCHHHHHHHH
Confidence 3468888766542 22223344444443332322 24789999999986 34 688999999999988
Q ss_pred HHHc---------cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCccc
Q 013883 187 ILGL---------INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGK 257 (434)
Q Consensus 187 ~~~l---------~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~ 257 (434)
+.++ ++|||+|+++.|+|..+...+...|++++.++++.+++.+|++.+++++++++++|+++++ +|.
T Consensus 95 L~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~~tkaVi~~~~---~G~ 171 (438)
T PRK15407 95 FSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSPKTKAIMIAHT---LGN 171 (438)
T ss_pred HHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCcCCeEEEEeCC---CCC
Confidence 8875 4889999999999999999999999999999998768899999999999999999998754 554
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcCcCCccc-cCCCCccccCCCCCCCceEEEccCC--hhhccccceeeeEEeCh-hhH
Q 013883 258 MFTREELNVIASLCIENDVLVFSDEVYDKLA-FEMDHISIASLPGMYERTVTMNSLG--KTFSLTGWKIGWAIAPP-HLT 333 (434)
Q Consensus 258 ~~~~e~l~~i~~la~~~~~~iI~Deay~~~~-~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~~~~~~-~~~ 333 (434)
.. ++++|.++|++||++||+|++|+... +.+. .+..+ + .+.+.||. |.+. .|. .|+++++. ++.
T Consensus 172 p~---dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~--~~G~~---g--d~~~fSf~~~k~~~-~ge-GG~l~t~d~~l~ 239 (438)
T PRK15407 172 PF---DLAAVKAFCDKHNLWLIEDNCDALGSTYDGR--MTGTF---G--DIATLSFYPAHHIT-MGE-GGAVFTNDPLLK 239 (438)
T ss_pred hh---hHHHHHHHHHHCCCEEEEECccchhhhcCCe--eeecc---C--ceEEEeCCCCCCcc-ccC-ceEEEECCHHHH
Confidence 33 68889999999999999999998654 2222 22222 2 24456664 7675 454 58888874 444
Q ss_pred HHHHHHh
Q 013883 334 WGVRQAH 340 (434)
Q Consensus 334 ~~l~~~~ 340 (434)
+.++..+
T Consensus 240 ~~~~~~~ 246 (438)
T PRK15407 240 KIIESFR 246 (438)
T ss_pred HHHHHHH
Confidence 4454443
No 230
>PRK05968 hypothetical protein; Provisional
Probab=99.83 E-value=1.3e-18 Score=172.76 Aligned_cols=250 Identities=17% Similarity=0.207 Sum_probs=170.9
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhH----HHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY----EATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~ 223 (434)
..+|+++++++++ .+..+++ ++++.|+..++.+++++||+|+++.+.|... ...+...|++++.++.
T Consensus 65 ~~~le~~lA~l~g--------~~~av~~-~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 65 VRAFEEMLAKLEG--------AEDARGF-ASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred HHHHHHHHHHHhC--------CCcEEEE-CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 4578888888776 2224555 5557899999998999999999999999874 3456678999988864
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
. |++.+++++ +++++|++++|.||++ +..++++|+++|++||+++|+|++|....+.. ++. .
T Consensus 136 ~------d~~~l~~~i-~~tklV~ie~pt~~~~---~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~---p~~-~---- 197 (389)
T PRK05968 136 R------DEEAVAKAL-PGAKLLYLESPTSWVF---ELQDVAALAALAKRHGVVTMIDNSWASPVFQR---PIT-L---- 197 (389)
T ss_pred C------CHHHHHHhc-ccCCEEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCcchhccC---chh-c----
Confidence 3 789999988 5789999987666655 55789999999999999999999997654321 111 1
Q ss_pred CceEEEccCChhhcccc-ceeeeEEeChhhHHHHHHHhh-ccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAHS-FLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+..+++.|++|.++.+| .+.|+++++++++++++.... ......+...+..+...|+. +....++..++...+.
T Consensus 198 g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t----l~~r~~~~~~~a~~la 273 (389)
T PRK05968 198 GVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT----LPLRMKAHEASALEIA 273 (389)
T ss_pred CCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc----HHHHHHHHHHHHHHHH
Confidence 23478889999997544 578999999998888776543 23344555555555444443 3444455566677777
Q ss_pred HHhhhC-CCE-eecC------------CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 382 EGLNAV-GFK-VFPS------------SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 382 ~~L~~~-g~~-~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+.|++. ++. +..| .++++. +++.. +. +..+|+++| +..++.+.=|..
T Consensus 274 ~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~s-f~~~~-~~-~~~~f~~~L-~~~~~~~s~G~~ 334 (389)
T PRK05968 274 RRLKAHPVVERVCHPALANHPPAGLSGTSGLFS-FIFRE-GI-DVRAFADAL-KLFRLGVSWGGH 334 (389)
T ss_pred HHHHhCCCccEEECCCCCCChHHhCCCCceEEE-EEECC-HH-HHHHHHHhC-CccEEecCCCCC
Confidence 888775 443 3212 134443 33432 22 356777776 345766666654
No 231
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=2e-18 Score=170.81 Aligned_cols=260 Identities=16% Similarity=0.211 Sum_probs=168.6
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH----HHHcC
Q 013883 140 NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LSMAG 215 (434)
Q Consensus 140 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G 215 (434)
+.|... |.+. ++++.+.+.+..|. + +++++++++.++..++. ++++||+|+++++.|..+... +...|
T Consensus 39 ~~Y~r~-~~p~-~~~le~~la~l~g~----~-~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G 110 (378)
T TIGR01329 39 YDYTRS-GNPT-RTALESLLAKLDKA----D-RAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSG 110 (378)
T ss_pred CccCCC-CChH-HHHHHHHHHHHhCC----C-cEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcC
Confidence 456654 3222 33444444443332 3 45666666789988776 789999999999999886553 45689
Q ss_pred CEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCcc
Q 013883 216 AKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHIS 295 (434)
Q Consensus 216 ~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~ 295 (434)
++++.++.. |++.+++++++++++|++++|+||||.+. ++++|+++|+++|+++|+|++|..... ..+
T Consensus 111 ~~v~~vd~~------d~~~le~~i~~~tklv~le~psnptg~v~---dl~~I~~la~~~g~~vivD~a~~~~~~---~~~ 178 (378)
T TIGR01329 111 VVVVHVDTT------DLDKVKAALGPKTKLVLLESPTNPLQKIV---DIRKISEMAHAQNALVVVDNTMMSPLL---CNP 178 (378)
T ss_pred cEEEEeCCC------CHHHHHHhcCcCceEEEEECCCCCCCeee---cHHHHHHHHHHcCCEEEEECCCccccc---CCh
Confidence 999988764 78999999999999999999999999988 478899999999999999999854221 111
Q ss_pred ccCCCCCCCceEEEccCChhhcc-ccceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHH
Q 013883 296 IASLPGMYERTVTMNSLGKTFSL-TGWKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDY 373 (434)
Q Consensus 296 ~~~~~~~~~~~i~i~S~SK~~g~-~G~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~ 373 (434)
+ .+ +-.+++.|++|.++- .|.+.|+++++ +++.++++..+.......++...+.+...|+. +....++.
T Consensus 179 l-~~----g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~t----l~~R~e~~ 249 (378)
T TIGR01329 179 L-EL----GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKT----LAIRIEKQ 249 (378)
T ss_pred h-hc----CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCC----HHHHHHHH
Confidence 1 11 234889999998852 34679999885 45556677666544444444444333333332 34444555
Q ss_pred HHHHHHHHHHhhhCC-C-Ee-ec----------------CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 374 SAKKAILVEGLNAVG-F-KV-FP----------------SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 374 ~~~~~~l~~~L~~~g-~-~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
.++...+.+.|++.. + ++ ++ ..++++.| .+. +.....+|+..| +..++.++-|..
T Consensus 250 ~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf-~~~--~~~~~~~~~~~L-~~~~i~~s~G~~ 323 (378)
T TIGR01329 250 QENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSF-ETG--SVALSKRLVEAT-KLFSITVSFGSV 323 (378)
T ss_pred HHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEE-EEC--CHHHHHHHHHhC-cCcccccCCCCC
Confidence 555666666665431 1 11 11 12344443 331 222255777777 667888777764
No 232
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.82 E-value=4.9e-18 Score=168.17 Aligned_cols=287 Identities=15% Similarity=0.085 Sum_probs=176.5
Q ss_pred CeeEeCCC-CCCCCCcHHHHHHHHHHHHcCC--------CCCCC--CCC----cHHHHHHHHHHHHhhcCCCCCCCCcEE
Q 013883 110 GAINLGQG-FPNFDGPDFVKDAAIQAIRDGK--------NQYAR--GHG----VPEFNSAIASRFKKDSGLEVDPEKEVT 174 (434)
Q Consensus 110 ~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~~--------~~Y~~--~~G----~~~lr~~ia~~l~~~~g~~~~~~~~i~ 174 (434)
..|||+.. |.++...+.+.+++.+++.... +..+. ..| +.++++.++++++ . ++ .++
T Consensus 5 ~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~----~---~~-~l~ 76 (370)
T PRK05937 5 LSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG----A---PE-AFI 76 (370)
T ss_pred ceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC----C---Ce-EEE
Confidence 67899886 9999999999999988876531 11111 112 3466777777665 2 23 577
Q ss_pred EcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcEEEe
Q 013883 175 VTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRAILM 248 (434)
Q Consensus 175 ~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~i~~ 248 (434)
+++|. .++..++..+.++||.|++..-.|......+.......+.++ ..|++.+++.++. ++++|++
T Consensus 77 ~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~~~~~~~v~v 149 (370)
T PRK05937 77 VPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR------HNDLDHLESLLESCRQRSFGRIFIFV 149 (370)
T ss_pred ECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec------CCCHHHHHHHHHhhhccCCCcEEEEE
Confidence 77776 555555666667888888878888877777776554444443 2478999988863 3556678
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEe
Q 013883 249 NTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 328 (434)
Q Consensus 249 ~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~ 328 (434)
++++|++|.+.| +++|.++|+++|+++++||+|....++.+...+....+..+..+.+.||||.+|..| .| +++
T Consensus 150 ~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G--~~-vl~ 223 (370)
T PRK05937 150 CSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--AA-LLS 223 (370)
T ss_pred ecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc--eE-EEc
Confidence 899999999997 667888899999999999999864443222111111111122367889999999667 33 455
Q ss_pred ChhhHHHHHHHhhcc--ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCC
Q 013883 329 PPHLTWGVRQAHSFL--TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTP 406 (434)
Q Consensus 329 ~~~~~~~l~~~~~~~--~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 406 (434)
.+++...+....... ..+.+.+...++..+++...+..+..++++++.++++.+.|...+... .. .+.+ .
T Consensus 224 ~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~~~~~----~~-~i~~--~- 295 (370)
T PRK05937 224 SSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSAAPGC----VQ-PIFL--P- 295 (370)
T ss_pred CHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCCCCC----EE-EEEe--C-
Confidence 566555444222111 233455555555555543211123456677778888888776432110 01 1222 1
Q ss_pred CCCCCHHHHHHHHHHhcCeEEE
Q 013883 407 FGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 407 ~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
+. ...++.+.| +++||.+.
T Consensus 296 -~~-~~~~~~~~L-~~~gi~v~ 314 (370)
T PRK05937 296 -GI-SEQELYSKL-VETGIRVG 314 (370)
T ss_pred -Ch-hHHHHHHHH-HHCCeeEE
Confidence 11 345666666 45599886
No 233
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.82 E-value=1.9e-18 Score=165.33 Aligned_cols=290 Identities=19% Similarity=0.171 Sum_probs=202.9
Q ss_pred CCCcHHHHHHHHHHHHcC--CCCCCCCCC------cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc--
Q 013883 121 FDGPDFVKDAAIQAIRDG--KNQYARGHG------VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-- 190 (434)
Q Consensus 121 ~~~~~~v~~~~~~~~~~~--~~~Y~~~~G------~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-- 190 (434)
-+..+.+.+++...+... +..-....| +.+-|+.+|+.++ ++++ +|++|+|++|+..+++...
T Consensus 11 Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llg------a~~~-eIiFTSG~TEsnNlaI~g~~~ 83 (386)
T COG1104 11 TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLG------ADPE-EIIFTSGATESNNLAIKGAAL 83 (386)
T ss_pred CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhC------CCCC-eEEEecCCcHHHHHHHHhhHH
Confidence 345677888887777653 100011123 4466777777776 6776 8999999999999998873
Q ss_pred c----CCCCeEEEcCCCchhHHHHHHHc---CCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHH
Q 013883 191 I----NPGDEVILFAPFYDSYEATLSMA---GAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREE 263 (434)
Q Consensus 191 ~----~~gd~Vlv~~p~y~~~~~~~~~~---G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~ 263 (434)
. +.|..|++..--++...+.++.+ |.+|.++|.+. ++.+|++.|+++++++|.+|-+...||.||++.|
T Consensus 84 a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~-~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQp--- 159 (386)
T COG1104 84 AYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS-NGLVDLEQLEEALRPDTILVSIMHANNETGTIQP--- 159 (386)
T ss_pred hhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC-CCeEcHHHHHHhcCCCceEEEEEecccCeeeccc---
Confidence 2 24678999988999888777766 99999999986 7899999999999999999999999999999986
Q ss_pred HHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHH--H---HH
Q 013883 264 LNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG--V---RQ 338 (434)
Q Consensus 264 l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~--l---~~ 338 (434)
+++|.++|+++++++.+|.++... .-+..+..+ .-.+...|-.|..|..| +|.++.++.+.-. + -+
T Consensus 160 I~ei~~i~k~~~i~fHvDAvQa~G---kipi~~~~~----~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQ 230 (386)
T COG1104 160 IAEIGEICKERGILFHVDAVQAVG---KIPIDLEEL----GVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQ 230 (386)
T ss_pred HHHHHHHHHHcCCeEEEehhhhcC---ceecccccc----CcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcC
Confidence 566899999999999999998752 112222221 12355667779999777 8998886544211 1 01
Q ss_pred HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--CCEeecCC---eeEEEeeecCCCCCCCHH
Q 013883 339 AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV--GFKVFPSS---GTYFVVVDHTPFGHETDI 413 (434)
Q Consensus 339 ~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~---~~~~~~~~~~~~~~~~~~ 413 (434)
-+.....+.+.++..++..+++...+.++....+++..|+.|.+.|.+. ++.+.... -...+.+.++ +. ..+
T Consensus 231 E~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~--gv-~gE 307 (386)
T COG1104 231 ERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFP--GV-EGE 307 (386)
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeC--CC-cHH
Confidence 1111234556667777777777655567777888999999999999874 33333221 1112223332 12 355
Q ss_pred HHHHHHHHhcCeEEECCCCCC
Q 013883 414 AFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 414 ~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
.+...| +.+||++..|+.|.
T Consensus 308 ~ll~~L-~~~gI~vStGSACs 327 (386)
T COG1104 308 SLLLAL-DLAGIAVSTGSACS 327 (386)
T ss_pred HHHHhc-cccCeEEecccccc
Confidence 665554 77899999999873
No 234
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=3e-18 Score=173.15 Aligned_cols=313 Identities=15% Similarity=0.128 Sum_probs=193.9
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...||+..|. ..+. .+|.+.+++.+++.+.. .+.......+.+..+++.+.+..+... .+ .+++++++++|++
T Consensus 55 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~~~~~~~~~~~la~~l~~~~p~~~-~~-~v~f~~sGseA~e 131 (443)
T PRK06058 55 GNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFT-HTCFMVTPYEGYVAVAEQLNRLTPGDH-EK-RSALFNSGAEAVE 131 (443)
T ss_pred CCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhcc-CccccccCCHHHHHHHHHHHHhCCCCC-CC-EEEEeCCcHHHHH
Confidence 34578887663 2222 36788899999887632 222222234666777887776543211 13 6888888899999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHHc-CC-------------EEEEEEcCC--CC---CCC--------CHHHH
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSMA-GA-------------KIKCITLRP--PD---FAI--------PIEEL 235 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~--~~---~~~--------d~~~l 235 (434)
.+++... ...++|+...+.|++........ +. .+..+|+.. .+ ... .++.+
T Consensus 132 ~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 211 (443)
T PRK06058 132 NAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVI 211 (443)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHH
Confidence 9987432 23478999999999876554332 11 122222211 00 000 12334
Q ss_pred Hhhcc-cCCcEEEecCCCCCc-ccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccC
Q 013883 236 KSTIS-KNTRAILMNTPHNPT-GKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSL 312 (434)
Q Consensus 236 ~~~i~-~~~~~i~~~~p~NPT-G~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~ 312 (434)
++.+. +++.+|+ ..|.+.. |+. ++.+.+++|.++|++||+++|.||++.+|.+.|.......+.-.+| +.++
T Consensus 212 ~~~~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PD----iv~~ 286 (443)
T PRK06058 212 EKQVGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPD----LITT 286 (443)
T ss_pred HHhhCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCC----EEEE
Confidence 44443 3455555 4565555 554 4678899999999999999999999999876665443333322233 3456
Q ss_pred ChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----C
Q 013883 313 GKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----G 388 (434)
Q Consensus 313 SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g 388 (434)
+|.+| .|+++|++++++++.+.+.......+++.+++++.++.++|+..++ +++.++.+++.+++.+.|+++ +
T Consensus 287 gK~l~-~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l~~~~~ 363 (443)
T PRK06058 287 AKGIA-GGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEE--DDLVARARQIEALMTDRLRALAAEDD 363 (443)
T ss_pred ccccc-CCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 89999 8999999999999988776555556889999999999999975321 234566666667777777653 3
Q ss_pred C-EeecCCeeEEEeeecCCCCCCC----HHHHHHHHHHhcCeEEECCCC
Q 013883 389 F-KVFPSSGTYFVVVDHTPFGHET----DIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 389 ~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+ .-+...|.|+.+.-..+....+ ...+.+.+++ +||.+.|+..
T Consensus 364 ~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~~~~~~~ 411 (443)
T PRK06058 364 RIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHA-AGVIVLTCGT 411 (443)
T ss_pred cEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHH-CCeEEeccCC
Confidence 2 2245666665443222111111 2234455544 5999998643
No 235
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=2.3e-18 Score=171.52 Aligned_cols=211 Identities=16% Similarity=0.168 Sum_probs=154.9
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH----HHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~ 223 (434)
..+|++.++++.+ .+ ..++++++++|+.+++.+++++||+|+++.++|.+.... +..+|+++..+.
T Consensus 63 v~~lE~~la~leg--------~~-~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd- 132 (432)
T PRK06702 63 LAAFEQKLAELEG--------GV-GAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFN- 132 (432)
T ss_pred HHHHHHHHHHHhC--------CC-cEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEEC-
Confidence 4577777777765 23 578899999999999999999999999999999876665 677899998884
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
..+|++.++++++++||+|++++|.||++.+++ +++|+++|++||+++|+|++|..- .+.. +-..
T Consensus 133 ----~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP-------~~~~-pl~~ 197 (432)
T PRK06702 133 ----PNLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATP-------YLCQ-AFEH 197 (432)
T ss_pred ----CCCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCch-------hhCC-hhhc
Confidence 346899999999999999999999999999985 788999999999999999998421 1111 1122
Q ss_pred CceEEEccCCh-----hhcccccee-----eeEEeC-hhhH---------------------HHHH-HHhhccccCCchH
Q 013883 304 ERTVTMNSLGK-----TFSLTGWKI-----GWAIAP-PHLT---------------------WGVR-QAHSFLTFATSTP 350 (434)
Q Consensus 304 ~~~i~i~S~SK-----~~g~~G~R~-----G~~~~~-~~~~---------------------~~l~-~~~~~~~~~~~~~ 350 (434)
+-.|++.|+|| ..+++|.++ +|...+ .+++ .+.+ ...+....+.+++
T Consensus 198 GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~ 277 (432)
T PRK06702 198 GANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPF 277 (432)
T ss_pred CCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHH
Confidence 34599999999 667777776 454432 1111 1111 1222334577777
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 351 MQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 351 ~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
..+.+...|+. ++...++..++...+.+.|++.
T Consensus 278 ~a~l~~rgL~T----l~lR~~r~~~Na~~la~~L~~~ 310 (432)
T PRK06702 278 NAYISNIGLET----LHLRMERHSENALAVAKWLADH 310 (432)
T ss_pred HHHHHHhccCc----HHHHHHHHHHHHHHHHHHHHhC
Confidence 77777777775 3334455567777888888765
No 236
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.82 E-value=1.4e-17 Score=165.60 Aligned_cols=265 Identities=14% Similarity=0.138 Sum_probs=187.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH-HHHHHHHHHccC---CCCeEEEcCCCchhHHHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLIN---PGDEVILFAPFYDSYEATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~-~ai~~~~~~l~~---~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 223 (434)
...+...+.+.+.+..|..- .+ ..++++|++ .++.+++.++-. +||+|+++.-+|......+..+|++++.++.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~-~~-~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~ 180 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRS-IK-SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCC-CC-EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeee
Confidence 45666666666666667531 12 577788888 688878777652 5899999999999999999999999999995
Q ss_pred --CCCCCCCCHHHHHhhccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccC
Q 013883 224 --RPPDFAIPIEELKSTISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIAS 298 (434)
Q Consensus 224 --~~~~~~~d~~~l~~~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~ 298 (434)
+++++.+|++.++++|++ +.+++++.+|+ |+.....+++++|+++|++||+++|+|++|..... ....
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~-----~~~~ 253 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN-----KYME 253 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh-----hhhh
Confidence 556799999999999986 45566666665 55555667899999999999999999999985321 1111
Q ss_pred C--CCC-C-CceEEEccCChhhccccceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHH
Q 013883 299 L--PGM-Y-ERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDY 373 (434)
Q Consensus 299 ~--~~~-~-~~~i~i~S~SK~~g~~G~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~ 373 (434)
+ .+. . .-.+++.|++|.+.++|+ .|+++. ++++++.++.... ....+.+.+.+...++..+.+.++++.+++
T Consensus 254 ~~~~g~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~--g~~~~s~~~~~~~~ll~~G~~g~~~li~~~ 330 (444)
T TIGR03531 254 LINKAIKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYP--GRASASPSLDVLITLLSLGSKGYLELLKER 330 (444)
T ss_pred hhhccccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhcc--CCCCChHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 1 010 1 124678899999988776 455546 6778777766432 233456778888888888888899999999
Q ss_pred HHHHHHHHHHhhhC----CCEeecCCeeE-EEeeecCCCCCCCHHHHHHHHHHhcCe
Q 013883 374 SAKKAILVEGLNAV----GFKVFPSSGTY-FVVVDHTPFGHETDIAFCEYLIKEVGV 425 (434)
Q Consensus 374 ~~~~~~l~~~L~~~----g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Ll~~~GV 425 (434)
.++++++.+.|+++ |..+.....+. .+.+.+......+...+...|..+ +|
T Consensus 331 ~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~-~v 386 (444)
T TIGR03531 331 KEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSR-RV 386 (444)
T ss_pred HHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhC-CC
Confidence 99999999998764 77776543333 233333222122455666666544 55
No 237
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=2.2e-18 Score=172.77 Aligned_cols=156 Identities=21% Similarity=0.293 Sum_probs=125.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhH----HHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY----EATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~ 223 (434)
...|.+.++++.+ .+ ..++++++++|+..++.+++++||+|+++.+.|+.. ...+...|++++.++.
T Consensus 66 ~~~Le~~lA~leg--------~~-~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 66 TDVFEKRIAALEG--------GI-GALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred HHHHHHHHHHHhC--------CC-cEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 3567777777664 33 577888889999999999999999999999988763 3456678999998875
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
. |++.+++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..-. ...+ + ..
T Consensus 137 ~------d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~~---~~~p---l--~~ 199 (431)
T PRK08248 137 S------DPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASPY---LLRP---I--EH 199 (431)
T ss_pred C------CHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCccc---cCCh---h--Hc
Confidence 3 789999999999999999999999999996 5678999999999999999986311 1111 1 23
Q ss_pred CceEEEccCChhhccccceeeeEEeC
Q 013883 304 ERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
+..+++.|++|.+|.+|.++|++++.
T Consensus 200 gaDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 200 GADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred CCCEEEEcCccccCCCCCceEEEEEe
Confidence 45688999999999899999887773
No 238
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=3.1e-18 Score=170.21 Aligned_cols=209 Identities=19% Similarity=0.231 Sum_probs=149.4
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhH----HHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY----EATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~ 223 (434)
..+|++.++++.+ . +. .+++++| +.++.+++. ++++||+|++++|.|++. ...+...|++++.++.
T Consensus 56 ~~~le~~lA~l~g------~-~~-~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 56 REALEDIIAELEG------G-TK-GFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred HHHHHHHHHHHhC------C-CC-eEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 4577888888765 2 23 5766666 678887776 789999999999988743 3455678999999876
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
. |++.+++++++++++|++++|+||||.+. ++++|.++|+++|+++|+|++|..+... ..+ . .
T Consensus 126 ~------d~~~l~~~l~~~tklV~l~~p~NptG~~~---dl~~I~~la~~~g~~vvvD~a~~~~~~~---~~~-~----~ 188 (390)
T PRK08064 126 T------NLEEVAQNIKPNTKLFYVETPSNPLLKVT---DIRGVVKLAKAIGCLTFVDNTFLTPLLQ---KPL-D----L 188 (390)
T ss_pred C------CHHHHHHhcCCCceEEEEECCCCCCcEec---cHHHHHHHHHHcCCEEEEECCCCccccc---Cch-h----h
Confidence 4 68999999999999999999999999998 4677888999999999999999764321 111 1 2
Q ss_pred CceEEEccCChhhc-cccceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFS-LTGWKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 304 ~~~i~i~S~SK~~g-~~G~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+..+++.|++|.++ .+|...|++++. +++++.++..+.......++...+. ++.. .+.+....++..++...+.
T Consensus 189 g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l---~~~g-l~tl~~R~~~~~~~a~~la 264 (390)
T PRK08064 189 GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL---VLRG-LKTLHVRLEHSSETANKIA 264 (390)
T ss_pred CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH---HHcc-cCcHHHHHHHHHHHHHHHH
Confidence 34588999999985 334556877764 6788888877654333333333332 3332 2224455566677777777
Q ss_pred HHhhhC
Q 013883 382 EGLNAV 387 (434)
Q Consensus 382 ~~L~~~ 387 (434)
+.|++.
T Consensus 265 ~~L~~~ 270 (390)
T PRK08064 265 LYLQEH 270 (390)
T ss_pred HHHhcC
Confidence 777764
No 239
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.81 E-value=2.1e-17 Score=165.82 Aligned_cols=310 Identities=13% Similarity=0.091 Sum_probs=189.4
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...||+..|.- .+. .+|.+.+++.+++.+..+. .......+....+++.+.+..+... .+ .+++++++++|++.
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~-~~~~~~~~~~~~la~~l~~~~p~~~-~~-~v~f~~SGseA~e~ 116 (425)
T PRK07495 40 RRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHT-CHQVVPYENYVRLAERLNALVPGDF-AK-KTIFVTTGAEAVEN 116 (425)
T ss_pred CEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCc-ccCccCCHHHHHHHHHHHHhCCCCC-CC-EEEECCchHHHHHH
Confidence 35788876632 222 4677888999888763321 1111123445556666665432111 14 79999999999999
Q ss_pred HHHHcc--CCCCeEEEcCCCchhHHHHHHH-cCC-------------EEEEEEcCCCCCCCC----HHHHHhhcc-----
Q 013883 186 TILGLI--NPGDEVILFAPFYDSYEATLSM-AGA-------------KIKCITLRPPDFAIP----IEELKSTIS----- 240 (434)
Q Consensus 186 ~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~G~-------------~~~~v~~~~~~~~~d----~~~l~~~i~----- 240 (434)
+++... ....+|+.....|++....... .|. .+..+|+.....+.+ ++.+++.+.
T Consensus 117 AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~ 196 (425)
T PRK07495 117 AVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDP 196 (425)
T ss_pred HHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCC
Confidence 987553 2346788888888886433221 111 233344432111222 455566653
Q ss_pred cCCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccc
Q 013883 241 KNTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 241 ~~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
.+..+|++...+.-+|. .+|.+.+++|.++|++||+++|+||+|.+|.+.|........ +.+..+.+|||.++ +
T Consensus 197 ~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~----gv~pDi~tlsK~l~-~ 271 (425)
T PRK07495 197 QRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHH----EVAADLTTMAKGLA-G 271 (425)
T ss_pred CceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeeccc----CCCCCEEeehhhhc-C
Confidence 24556666533333784 578999999999999999999999999998766653333222 23345889999999 8
Q ss_pred cceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh----CCCEeecCC
Q 013883 320 GWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA----VGFKVFPSS 395 (434)
Q Consensus 320 G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~ 395 (434)
|+|+|++++++++.+.+.......+++.+++.++++.++|+..++ .++.++.+++.+.+++.|++ .+.......
T Consensus 272 G~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG 349 (425)
T PRK07495 272 GFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE--EDLCERANQLGNRLKQRLASLRETVPEIADIRG 349 (425)
T ss_pred CccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHhhCCCeeeeec
Confidence 999999999999987775544556888899999977777764211 12334444444445444443 222111222
Q ss_pred eeEEEeeecCCCCC-CC----HHHHHHHHHHhcCeEEEC
Q 013883 396 GTYFVVVDHTPFGH-ET----DIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 396 ~~~~~~~~~~~~~~-~~----~~~~~~~Ll~~~GV~v~p 429 (434)
-|+++|+.+.+... .. ...+.+.+++ .||++.+
T Consensus 350 ~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~ 387 (425)
T PRK07495 350 PGFMNAVEFNDADSGLPSAEFANRVRLKALE-KGLILLT 387 (425)
T ss_pred CceEEEEEEecCCCCCccHHHHHHHHHHHHH-CCeEEee
Confidence 37778887643210 11 2345555555 5999876
No 240
>PLN02509 cystathionine beta-lyase
Probab=99.81 E-value=7.4e-18 Score=169.36 Aligned_cols=221 Identities=16% Similarity=0.219 Sum_probs=156.5
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH----HHHH
Q 013883 138 GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA----TLSM 213 (434)
Q Consensus 138 ~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~ 213 (434)
..+.|... |.+ .++++.+.+.+..| .+ ..++++++++++.+++ .++++||+|++++|.|..+.. .+..
T Consensus 123 ~~~~Y~r~-gnp-t~~aLE~~lA~leg----~e-~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~ 194 (464)
T PLN02509 123 GPYDYTRS-GNP-TRDALESLLAKLDK----AD-RAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPR 194 (464)
T ss_pred CCCccCCC-CCH-HHHHHHHHHHHHhC----CC-EEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHH
Confidence 34668776 654 57777777776654 34 5667777788987655 578999999999999998764 3456
Q ss_pred cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC
Q 013883 214 AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDH 293 (434)
Q Consensus 214 ~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~ 293 (434)
.|++++.++.. |++.+++++++++++|++++|+||||.+ .++++|+++|++||+++|+|++|...... .
T Consensus 195 ~G~~v~~vd~~------d~e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~-~- 263 (464)
T PLN02509 195 SGVVVKRVNTT------NLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVLS-R- 263 (464)
T ss_pred CCeEEEEeCCC------CHHHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccccccC-C-
Confidence 79998877543 6899999999999999999999999986 47899999999999999999998654321 1
Q ss_pred ccccCCCCCCCceEEEccCChhhcccc-ceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHH
Q 013883 294 ISIASLPGMYERTVTMNSLGKTFSLTG-WKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKR 371 (434)
Q Consensus 294 ~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~ 371 (434)
.+ ..+..+++.|++|.++-+| .-.|+++++ +.+...++..+.......++...+.+...|+ .+....+
T Consensus 264 -pl-----~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~----tL~~R~~ 333 (464)
T PLN02509 264 -PL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIK----TMALRIE 333 (464)
T ss_pred -hh-----hcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhh----hHHHHHH
Confidence 11 1233588999999986323 236777765 4444555544443333344444443333333 3555667
Q ss_pred HHHHHHHHHHHHhhhC
Q 013883 372 DYSAKKAILVEGLNAV 387 (434)
Q Consensus 372 ~~~~~~~~l~~~L~~~ 387 (434)
+..++...+.+.|++.
T Consensus 334 r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 334 KQQENARKIAMYLSSH 349 (464)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 7777888888888764
No 241
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=5.1e-18 Score=167.28 Aligned_cols=220 Identities=15% Similarity=0.185 Sum_probs=155.4
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH----HHHHcC
Q 013883 140 NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA----TLSMAG 215 (434)
Q Consensus 140 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G 215 (434)
+.|.. +..+.++.+++.+....+ .++ .+++++ +++|+..++.+++++||.|++++|.|+++.. .++..|
T Consensus 56 y~YsR--~gnPt~~~Le~~la~le~---~~~-~v~~sS-G~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~G 128 (395)
T PRK05967 56 YTYGT--RGTPTTDALCKAIDALEG---SAG-TILVPS-GLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLG 128 (395)
T ss_pred CccCC--CCChHHHHHHHHHHHHhC---CCC-EEEECc-HHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcC
Confidence 44653 334556666666654433 233 555555 6899999999999999999999999999765 457789
Q ss_pred CEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCcc
Q 013883 216 AKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHIS 295 (434)
Q Consensus 216 ~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~ 295 (434)
+++..++.. +.+.+++++++++|+|++++|+||++. ..++++|+++|+++|+++|+|++|....+.
T Consensus 129 i~v~~vd~~------~~e~l~~al~~~TklV~lesPsNP~l~---v~dl~~I~~la~~~g~~vvVD~t~a~p~~~----- 194 (395)
T PRK05967 129 VEVEYYDPE------IGAGIAKLMRPNTKVVHTEAPGSNTFE---MQDIPAIAEAAHRHGAIVMMDNTWATPLYF----- 194 (395)
T ss_pred eEEEEeCCC------CHHHHHHhcCcCceEEEEECCCCCCCc---HHHHHHHHHHHHHhCCEEEEECCccCceec-----
Confidence 998887543 357899999999999999999999874 458999999999999999999999764321
Q ss_pred ccCCCCCCCceEEEccCChhhc-cccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHH
Q 013883 296 IASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYS 374 (434)
Q Consensus 296 ~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 374 (434)
..+ ..+-.+++.|.+|.++ -.+..+|+++.+++..+++...........++...+.+..-|+. +.-..++..
T Consensus 195 -~pl--~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T----l~lR~~~~~ 267 (395)
T PRK05967 195 -RPL--DFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLRT----MGIRLEHHR 267 (395)
T ss_pred -Chh--HcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCccc----HHHHHHHHH
Confidence 111 1234589999999974 34567898888887766666555444444555544443333333 344445556
Q ss_pred HHHHHHHHHhhhC
Q 013883 375 AKKAILVEGLNAV 387 (434)
Q Consensus 375 ~~~~~l~~~L~~~ 387 (434)
++...+.+.|++.
T Consensus 268 ~na~~lA~~L~~h 280 (395)
T PRK05967 268 KSALEIARWLEGR 280 (395)
T ss_pred HHHHHHHHHHHhC
Confidence 6667777777764
No 242
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=6e-18 Score=167.29 Aligned_cols=209 Identities=21% Similarity=0.254 Sum_probs=148.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH----HHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA----TLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~~ 223 (434)
..+|++.++++.+ . +. .+++++| +.++..++ .++++||+|++++|.|++... .+...|++++.++.
T Consensus 52 ~~~Le~~lA~l~g------~-~~-~~~~~sG-~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 52 RAALEELIAVLEG------G-HA-GFAFGSG-MAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred HHHHHHHHHHHhC------C-Cc-eEEeCCH-HHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 4577777777765 1 22 5666666 56777655 578999999999999985433 34457999888864
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
. |++.+++++++++++|++++|+||||.+. ++++|.++|+++|+++|+|++|....+. . .+ . .
T Consensus 122 ~------d~~~l~~ai~~~tklV~le~P~NPtg~~~---dl~~I~~la~~~g~~lvvD~a~~~~~~~-~--p~-~----~ 184 (377)
T PRK07671 122 S------NLEEVEEAIRPNTKAIYVETPTNPLLKIT---DIKKISTIAKEKGLLTIVDNTFMTPYWQ-S--PI-S----L 184 (377)
T ss_pred C------CHHHHHHhcCCCCeEEEEECCCCCCCccc---CHHHHHHHHHHcCCEEEEECCCCccccC-C--hh-h----h
Confidence 3 78999999999999999999999999887 5777888999999999999999753322 1 11 1 1
Q ss_pred CceEEEccCChhhcccc-ceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTG-WKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G-~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+..+++.|++|.++-++ .-.|++++ +++++++++..+.......+....+.+...|+ .+....++..++...+.
T Consensus 185 g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~----tl~~R~~~~~~na~~la 260 (377)
T PRK07671 185 GADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLK----TLGIRMEEHETNSRAIA 260 (377)
T ss_pred CCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC----hHHHHHHHHHHHHHHHH
Confidence 33589999999997332 24566666 46787888777765444444444443333332 24455666777888888
Q ss_pred HHhhhC
Q 013883 382 EGLNAV 387 (434)
Q Consensus 382 ~~L~~~ 387 (434)
+.|++.
T Consensus 261 ~~L~~~ 266 (377)
T PRK07671 261 EFLNNH 266 (377)
T ss_pred HHHHcC
Confidence 888764
No 243
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.80 E-value=2.2e-17 Score=165.33 Aligned_cols=309 Identities=14% Similarity=0.113 Sum_probs=185.5
Q ss_pred cCCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhc--CCCCCCCCcEEE-cCChHH
Q 013883 108 KHGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDS--GLEVDPEKEVTV-TSGCTE 181 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~--g~~~~~~~~i~~-t~G~~~ 181 (434)
+...|||..|.-. +. .+|.+.+++++++.+....+... ...+.+..+++.+.+.. +... .+ .+++ ++++++
T Consensus 34 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~-~~~~~~~~lae~l~~~~~~~~~~-~~-~~~f~~~sGse 110 (412)
T TIGR02407 34 GKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLD-MATEAKREFLETFNEIILKPRGL-DY-KVQFPGPTGTN 110 (412)
T ss_pred CCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccc-cCcHHHHHHHHHHHHhccCccCC-Cc-eEEEeCCCchH
Confidence 3357888766322 22 36788899988887522211111 12345556666665432 1111 12 3555 588899
Q ss_pred HHHHHHHHcc--CCCCeEEEcCCCchhHHHHHHH-cCC------------EEEEEEcCC-CCC-CCCHHHHHhhccc---
Q 013883 182 AIAATILGLI--NPGDEVILFAPFYDSYEATLSM-AGA------------KIKCITLRP-PDF-AIPIEELKSTISK--- 241 (434)
Q Consensus 182 ai~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~G~------------~~~~v~~~~-~~~-~~d~~~l~~~i~~--- 241 (434)
|++.+++... ....+|+.....|++....... .|. .+..+|+.+ ... .-+++.+++.+..
T Consensus 111 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 190 (412)
T TIGR02407 111 AVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS 190 (412)
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccC
Confidence 9999987653 2346788888888886544332 221 223333321 000 0246778877752
Q ss_pred ---CCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc
Q 013883 242 ---NTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS 317 (434)
Q Consensus 242 ---~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 317 (434)
++.+|++...+++.|+ .++.+.+++|.++|++||+++|+||++.+|...|.........-.+| +.+++|.+|
T Consensus 191 ~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD----i~~~~K~lg 266 (412)
T TIGR02407 191 GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD----IVCLSKSIS 266 (412)
T ss_pred CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC----EEEechhcc
Confidence 3466777666888998 67888899999999999999999999998765554333322222334 446899999
Q ss_pred cc-cceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhh----hCC-CE
Q 013883 318 LT-GWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLN----AVG-FK 390 (434)
Q Consensus 318 ~~-G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~----~~g-~~ 390 (434)
+ |+|+|++++++++ +.+.......+++.+++...++.++|+. .++ .+..++.++..+.+.+.|+ +.+ +.
T Consensus 267 -~~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~~ 342 (412)
T TIGR02407 267 -GYGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSD--DAFEKAVQRKSEIIQERLDRIVAEYPELI 342 (412)
T ss_pred -CCccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 7 9999999998876 4443333445777777766666666653 111 1122223333333333332 232 33
Q ss_pred eecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 391 VFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
......|+++|+.+.+. ....++...+++ +||++.+.
T Consensus 343 ~~vrg~Gl~~~l~l~~~--~~~~~~~~~~~~-~Gv~v~~~ 379 (412)
T TIGR02407 343 KQVRGRGLMQGIECGDG--DLAGKIAKAAFE-NGLIIETS 379 (412)
T ss_pred EeeecceeEEEEEecCh--HHHHHHHHHHHH-CCCEEecc
Confidence 34455677888887431 124467777765 59999874
No 244
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.80 E-value=5e-17 Score=157.02 Aligned_cols=271 Identities=20% Similarity=0.239 Sum_probs=184.5
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCC
Q 013883 124 PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-INPGDEVILFAP 202 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p 202 (434)
.....+++.+.++.+....++ -..+|.++++++++ .. ..+.++++|.|+.++++++ +.|||+|++++-
T Consensus 14 ~~~e~~~v~~vl~sg~i~~G~--~v~~FE~~~ae~~G--------~k-~ava~~sgT~AL~laL~al~ig~GDeVI~ps~ 82 (374)
T COG0399 14 GEEELAAVQEVLKSGWLTGGP--FVRRFEQAFAEYLG--------VK-YAVAVSSGTAALHLALLALAIGPGDEVIVPSF 82 (374)
T ss_pred chHHHHHHHHHHHcCCeecCh--HHHHHHHHHHHHhC--------CC-eEEEecChHHHHHHHHHhcCCCCCCEEEecCC
Confidence 355677788888876544433 35789999999987 45 6888888899999999976 699999999999
Q ss_pred CchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 203 FYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 203 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
+|......+...|++++.|.++++++.+|++.+|++|++++|+|+.+ +-.|... ++++|.++|++||++||+|.
T Consensus 83 TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipV---hl~G~~~---dm~~i~~la~~~~l~vIEDa 156 (374)
T COG0399 83 TFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPV---HLAGQPC---DMDAIMALAKRHGLPVIEDA 156 (374)
T ss_pred chHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEe---hhccCCC---CHHHHHHHHHHcCCeEEEEc
Confidence 99999999999999999999999899999999999999999999854 4467666 57778888999999999999
Q ss_pred cCCccc-cCCCCccccCCCCCCCceEEEccC--ChhhccccceeeeEEeC-hhhHHHHHHHhhccc--------------
Q 013883 283 VYDKLA-FEMDHISIASLPGMYERTVTMNSL--GKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLT-------------- 344 (434)
Q Consensus 283 ay~~~~-~~~~~~~~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~-------------- 344 (434)
+++... |.|+ .+..+. .+.+.|| .|.++ .| -.|.++++ +++.+.++.++....
T Consensus 157 Aqa~Ga~y~gk--~vGt~G-----d~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G 227 (374)
T COG0399 157 AQAHGATYKGK--KVGSFG-----DIGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELG 227 (374)
T ss_pred chhccCeecCc--cccccc-----ceEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecc
Confidence 998654 3333 222322 2456666 59998 66 56777775 667777766654332
Q ss_pred --cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC-CEe--ecCC--eeEEEe-eecCCCCCCCHHHHH
Q 013883 345 --FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG-FKV--FPSS--GTYFVV-VDHTPFGHETDIAFC 416 (434)
Q Consensus 345 --~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~--~~~~--~~~~~~-~~~~~~~~~~~~~~~ 416 (434)
+..+.+.+++...-|+. ++++.++-++..+...+.|+++. +.+ .+.. ..++.+ +.+.+. ..+-..+.
T Consensus 228 ~N~rm~~iqAAigl~QL~~----l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~-~~~R~~l~ 302 (374)
T COG0399 228 YNYRLTEIQAAIGLAQLER----LDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE-GISRDALM 302 (374)
T ss_pred cccCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC-CCCHHHHH
Confidence 11222223333333333 44444444555566666676652 322 2222 223322 233222 12345676
Q ss_pred HHHHHhcCeE
Q 013883 417 EYLIKEVGVV 426 (434)
Q Consensus 417 ~~Ll~~~GV~ 426 (434)
+.| ++.||.
T Consensus 303 ~~L-~~~gi~ 311 (374)
T COG0399 303 ESL-KEAGVG 311 (374)
T ss_pred HHH-HhCCCC
Confidence 666 455554
No 245
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=5.7e-17 Score=156.40 Aligned_cols=267 Identities=19% Similarity=0.256 Sum_probs=200.9
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchh--HHHHHHHcCCEEEEEEcCCC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS--YEATLSMAGAKIKCITLRPP 226 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~G~~~~~v~~~~~ 226 (434)
.++.+.+.+.+...++.. +.+ -++++.+++.++++++..+++|||+|++.....++ +.++++.+|++++.+...+
T Consensus 37 ~~~~~~~~~~L~~v~~t~-~~~-~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~w- 113 (383)
T COG0075 37 VGIMKEVLEKLRKVFGTE-NGD-VVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEW- 113 (383)
T ss_pred HHHHHHHHHHHHHHhcCC-CCc-EEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCC-
Confidence 455555666666666653 223 67778889999999999999999999999988887 5789999999999998875
Q ss_pred CCCCCHHHHHhhccc--CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCC
Q 013883 227 DFAIPIEELKSTISK--NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYE 304 (434)
Q Consensus 227 ~~~~d~~~l~~~i~~--~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~ 304 (434)
+..+|++++++++++ +.++|.+++...+||+.. .+++|+++|++||.++|+|.+-+. ++....+.. .+
T Consensus 114 g~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvln---pl~~I~~~~k~~g~l~iVDaVsS~---Gg~~~~vd~----wg 183 (383)
T COG0075 114 GEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLN---PLKEIAKAAKEHGALLIVDAVSSL---GGEPLKVDE----WG 183 (383)
T ss_pred CCCCCHHHHHHHHhcCCCccEEEEEeccCcccccC---cHHHHHHHHHHcCCEEEEEecccC---CCcccchhh----cC
Confidence 677899999999985 567888888888999987 467799999999999999998764 333333332 23
Q ss_pred ceEEEccCChhhcc-ccceeeeEEeChhhHHHHHH----------------Hh--hccccCCchHHHHHHHHHHhCC-hH
Q 013883 305 RTVTMNSLGKTFSL-TGWKIGWAIAPPHLTWGVRQ----------------AH--SFLTFATSTPMQWAATAALRAP-ET 364 (434)
Q Consensus 305 ~~i~i~S~SK~~g~-~G~R~G~~~~~~~~~~~l~~----------------~~--~~~~~~~~~~~q~a~~~~L~~~-~~ 364 (434)
-.+++.+--|.++. || +|.+..+++..+.++. .. ....++++....+++..+|+.- ++
T Consensus 184 iDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~E 261 (383)
T COG0075 184 IDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEE 261 (383)
T ss_pred ccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 45778888899964 44 8998888766554431 11 3456788888888888888873 55
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCEeecCCee---EEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 365 YYEELKRDYSAKKAILVEGLNAVGFKVFPSSGT---YFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
.+++..++++++.+.+++.++++|++.+..... -...+. .|.+.+ +.+....+++++||.+.+|..
T Consensus 262 Gle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~-~P~g~~-~~~~~~~~~~~~g~~i~gg~~ 330 (383)
T COG0075 262 GLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIK-VPEGVD-DKKVRRALLKEYGVEIAGGQG 330 (383)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEE-CCCCCC-cHHHHHHHHHhCCEEeccccc
Confidence 689999999999999999999999998772211 122222 355654 334444788999999998853
No 246
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=3.8e-17 Score=162.76 Aligned_cols=306 Identities=14% Similarity=0.108 Sum_probs=199.4
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-------CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDG-------KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
.+.|+|--.++- .++.+++++...+.+. ...|.....+.++.....+..++.+|.+. . +|..-+| +.
T Consensus 49 ~~~l~LiasEN~--~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~--a-nvqp~Sg-~~ 122 (493)
T PRK13580 49 RSSLKLIASENY--SSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEH--A-YVQPHSG-AD 122 (493)
T ss_pred hcCceEeccccc--CCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCc--c-cccCCCc-HH
Confidence 456777544321 2455555554444331 12344445566777777777777777654 2 4666666 77
Q ss_pred HHHHHHHHccCC-------------------------------CCeEEEcCCCchhHHHH---HHHcC--CEEEEEEcCC
Q 013883 182 AIAATILGLINP-------------------------------GDEVILFAPFYDSYEAT---LSMAG--AKIKCITLRP 225 (434)
Q Consensus 182 ai~~~~~~l~~~-------------------------------gd~Vlv~~p~y~~~~~~---~~~~G--~~~~~v~~~~ 225 (434)
|+..++.++++| ||+|+..++..++|... ....| .+.+.+++++
T Consensus 123 An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~ 202 (493)
T PRK13580 123 ANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDP 202 (493)
T ss_pred HHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCc
Confidence 777788888876 89999887776654221 12222 4666777776
Q ss_pred CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCc
Q 013883 226 PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYER 305 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~ 305 (434)
+++.+|++.+++.++++++.|+++..+|-.+ .. ++++|.++|+++|+++++|+++....++++... ..+....+.
T Consensus 203 ~~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~-~~~~~~~~~ 277 (493)
T PRK13580 203 DTGLLDYDEIAALAREFKPLILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVAGKVFT-GDEDPVPHA 277 (493)
T ss_pred ccCccCHHHHHHHHhhcCCEEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhceeccccch-hhcCCCCCC
Confidence 6788999999999999999998888877755 54 477788899999999999999987666533211 001011234
Q ss_pred eEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHh
Q 013883 306 TVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGL 384 (434)
Q Consensus 306 ~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L 384 (434)
.++++|++|++. |.+.|++++++++++.+.....+...++..+...+++.++... ....++.++++.++.+.|.+.|
T Consensus 278 D~vtgT~hKaL~--GP~GG~I~~~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L 355 (493)
T PRK13580 278 DIVTTTTHKTLR--GPRGGLVLAKKEYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGF 355 (493)
T ss_pred cEEEeCChhhcc--CCCeEEEEecHHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHH
Confidence 588999999983 4557999999999888865443333334334333334444431 1112556888999999999999
Q ss_pred hhCCCEeecC-CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 385 NAVGFKVFPS-SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 385 ~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
.+.|+++... ..+.++++++.+.+. +...+.+.+++.||.+.+
T Consensus 356 ~~~G~~vv~ggTdshIV~V~lg~~~~--~g~~a~~~L~e~GI~vn~ 399 (493)
T PRK13580 356 LKRGARLVTGGTDNHLVLIDVTSFGL--TGRQAESALLDAGIVTNR 399 (493)
T ss_pred HhcCCCccCCCCCCCEEEEEeCCHHH--HHHHHHHHHHHCCeEEcc
Confidence 9999987632 335667777643221 233455455677999874
No 247
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.80 E-value=8.4e-17 Score=161.30 Aligned_cols=297 Identities=14% Similarity=0.104 Sum_probs=175.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHH-HcCCCCCC--C----CCCcHHHHH----HHHHHHHhhcCCCCCCCCcEEEcCC
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAI-RDGKNQYA--R----GHGVPEFNS----AIASRFKKDSGLEVDPEKEVTVTSG 178 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~-~~~~~~Y~--~----~~G~~~lr~----~ia~~l~~~~g~~~~~~~~i~~t~G 178 (434)
+.+||-..+.- .+|.+++++..++ .....+|+ . ...+.+|.+ .+++++ |. +..++.+++
T Consensus 29 ~~~~l~~sen~--~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~----g~----~~alv~~~S 98 (416)
T PRK13034 29 DHLELIASENF--TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLF----GC----DYANVQPHS 98 (416)
T ss_pred cCeeecccccC--CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHh----CC----CceEEecCC
Confidence 56776544322 2677777777664 32111111 1 112345555 555544 32 313355677
Q ss_pred hHHHHHHHHHHccCCCCeEEEcCCCchhH-HHHHHH--cCCEE--EEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCC
Q 013883 179 CTEAIAATILGLINPGDEVILFAPFYDSY-EATLSM--AGAKI--KCITLRPPDFAIPIEELKSTISK-NTRAILMNTPH 252 (434)
Q Consensus 179 ~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~-~~~~~~--~G~~~--~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~ 252 (434)
++.|+..++.+++++||+|+++...|.++ ...+.. .+... ..++.+..++.+|++++++.++. ++++|++..+.
T Consensus 99 G~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~ 178 (416)
T PRK13034 99 GSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA 178 (416)
T ss_pred cHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc
Confidence 79999999999999999999999998763 221211 12222 23444444677899999998854 67888776554
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhh
Q 013883 253 NPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL 332 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~ 332 (434)
+|... ++++|.++|++||+++|+|+++....+..+ .....+ .+..+++.|++|.++ |...|+++++.+.
T Consensus 179 --~g~~~---dl~~l~~la~~~g~~livD~Aha~G~~~~g-~~~~~~---~~~Di~~~s~~K~l~--g~~GG~v~~~~~~ 247 (416)
T PRK13034 179 --YPREL---DFARFREIADEVGALLMVDMAHIAGLVAAG-EHPNPF---PHAHVVTTTTHKTLR--GPRGGMILTNDEE 247 (416)
T ss_pred --ccccc---CHHHHHHHHHHcCCEEEEeCcccccCcccC-CCCCCC---CCceEEEEeCcccCC--CCCCeEEEECcHH
Confidence 45555 577788889999999999999876554321 111111 234588999999994 2235887776544
Q ss_pred H-HHHHHHhhcc-ccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecC-CeeEEEeeecCCCC
Q 013883 333 T-WGVRQAHSFL-TFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFPS-SGTYFVVVDHTPFG 408 (434)
Q Consensus 333 ~-~~l~~~~~~~-~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~ 408 (434)
+ ..++...... ..+...+...++..++... +....+.++++.++.++|++.|++.|+++..+ .....+.+.+...+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~~t~i~~v~~~~~~ 327 (416)
T PRK13034 248 IAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGGTDNHLLLVDLRPKG 327 (416)
T ss_pred HHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCCCCcEEEEEcCCCC
Confidence 3 4344332111 1112222233333233321 12234557888899999999999999988642 22334555543333
Q ss_pred CCCHHHHHHHHHHhcCeEEEC
Q 013883 409 HETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 409 ~~~~~~~~~~Ll~~~GV~v~p 429 (434)
. +...+.++| +++||.+.+
T Consensus 328 ~-~~~~~~~~L-~~~GI~v~~ 346 (416)
T PRK13034 328 L-SGKDAEQAL-ERAGITVNK 346 (416)
T ss_pred C-CHHHHHHHH-HhCCcEEec
Confidence 2 344455555 667999974
No 248
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=7.4e-18 Score=168.78 Aligned_cols=156 Identities=17% Similarity=0.221 Sum_probs=121.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM----AGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~ 223 (434)
..+|+++++++.+ .+ ..++++++++|+..++.+++++||+|+++.+.|.+....+.. .|+++..++.
T Consensus 60 ~~~Le~~lA~l~g--------~~-~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~ 130 (425)
T PRK06084 60 NDVLEQRVAALEG--------GV-GALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH 130 (425)
T ss_pred HHHHHHHHHHHhC--------CC-ceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence 3577777777765 23 455667778999999999999999999999999865544432 4666655543
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
.|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... .+ + ..
T Consensus 131 ------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~---~p---~--~~ 193 (425)
T PRK06084 131 ------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC---RP---F--EH 193 (425)
T ss_pred ------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC---Ch---h--hc
Confidence 2799999999999999999999999999996 677999999999999999999753221 11 1 12
Q ss_pred CceEEEccCChhhccccceeeeEEeC
Q 013883 304 ERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
+..+++.|++|.++.+|.++|.+++.
T Consensus 194 gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 194 GADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred CCCEEEECchhcccccccceeEEEEe
Confidence 34589999999998889998877764
No 249
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.79 E-value=1.4e-16 Score=158.01 Aligned_cols=287 Identities=23% Similarity=0.259 Sum_probs=199.1
Q ss_pred CCcHHHHHHHHHHHHcCC-C----CCCCCC----CcHHHHHHHHHHHHhhcCCCCCC-CCcEEEcCChHHHHHHHHHHc-
Q 013883 122 DGPDFVKDAAIQAIRDGK-N----QYARGH----GVPEFNSAIASRFKKDSGLEVDP-EKEVTVTSGCTEAIAATILGL- 190 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~-~----~Y~~~~----G~~~lr~~ia~~l~~~~g~~~~~-~~~i~~t~G~~~ai~~~~~~l- 190 (434)
+.|+.+.+++.+.+.+.. . .+.... -+.+.|+.++++++ .++ + +|++++|+++++..++..+
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg------~~~~~-~v~~~~~~t~a~~~~~~~l~ 82 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLG------APPDE-EVVFTSNGTEALNAVASSLL 82 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHT------SSTTE-EEEEESSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcC------Ccccc-ccccccccchhhhhhhhccc
Confidence 346678888877765421 1 111111 12355666666665 445 5 8999999999999999999
Q ss_pred --cCCCCeEEEcCCCchhHH----HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHH
Q 013883 191 --INPGDEVILFAPFYDSYE----ATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 191 --~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
+++||+|++.+-.|++.. .+.+..|+++..++.+. +..+|++.+++++++++++++++..+|.||+..+ +
T Consensus 83 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~-~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p---i 158 (371)
T PF00266_consen 83 NPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADP-GGSLDLEDLEEALNPDTRLVSISHVENSTGVRNP---I 158 (371)
T ss_dssp HHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGT-TSSCSHHHHHHHHHTTESEEEEESBETTTTBBSS---H
T ss_pred cccccccccccccccccccccccccccccchhhhccccccc-cchhhhhhhhhhhccccceEEeecccccccEEee---e
Confidence 799999999999998865 33456799999999875 5688999999999999999999999999999986 5
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhc--
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSF-- 342 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~-- 342 (434)
++|.++|+++|+++++|.+++.... ...+.. .+-.+++.|..|.+|.+| +|+++.+++.++.++.....
T Consensus 159 ~~I~~~~~~~~~~~~vD~~~~~g~~---~id~~~----~~~D~~~~s~~Kl~gp~G--~g~l~v~~~~~~~~~p~~~~~~ 229 (371)
T PF00266_consen 159 EEIAKLAHEYGALLVVDAAQSAGCV---PIDLDE----LGADFLVFSSHKLGGPPG--LGFLYVRPEAIERLRPAKPGGG 229 (371)
T ss_dssp HHHHHHHHHTTSEEEEE-TTTTTTS---S--TTT----TTESEEEEESTSTTSSST--EEEEEEEHHHHHHHHTSSSSSS
T ss_pred ceehhhhhccCCceeEechhccccc---cccccc----cccceeeecccccCCCCc--hhhheehhhhhhcccccccccc
Confidence 6689999999999999999986332 122222 234578999999445444 89999999888777421111
Q ss_pred -------------------cccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCC-CEeecC-----Ce
Q 013883 343 -------------------LTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVG-FKVFPS-----SG 396 (434)
Q Consensus 343 -------------------~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-----~~ 396 (434)
...+++.+...++..+|+.. +..+++..++..+..+++.+.|++++ +.+..+ .+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 309 (371)
T PF00266_consen 230 YLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRP 309 (371)
T ss_dssp TTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGT
T ss_pred ccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeeccccccc
Confidence 11245555555656666543 34466778888889999999999875 444321 23
Q ss_pred eEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 397 TYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+.+. +.+. +. +..++.++|.++ ||.+..|..+
T Consensus 310 ~i~~-~~~~--~~-~~~~~~~~L~~~-~I~~~~G~~~ 341 (371)
T PF00266_consen 310 SIVS-FNLP--GS-DADDVVKYLEER-GIAVSTGSAC 341 (371)
T ss_dssp TEEE-EEET--TS-SHHHHHHHHHHH-TEEEEESTTT
T ss_pred ceEE-Eeec--CC-CHHHHHHHHhhc-CEEEeccCcc
Confidence 4333 3332 22 467788887666 9999997643
No 250
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.79 E-value=1.2e-16 Score=156.97 Aligned_cols=273 Identities=18% Similarity=0.179 Sum_probs=188.2
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH-HHHHcCC
Q 013883 138 GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA-TLSMAGA 216 (434)
Q Consensus 138 ~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~-~~~~~G~ 216 (434)
+...|.......+|.++++++++ .+ .++.+++++.|+.+++...++|||+| +.++|+.... .+...|+
T Consensus 63 GDe~yag~~s~~~lE~~va~~~G--------~~-~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Ga 131 (450)
T TIGR02618 63 GDEAYAGSRNFYHLERTVRELYG--------FK-YVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGA 131 (450)
T ss_pred cchhhcCCCcHHHHHHHHHHHHC--------CC-eEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCe
Confidence 44568888888999999999987 44 79999999999988877788999977 7788865544 4788999
Q ss_pred EEEEEEcC---------CCCCCCCHHHHHhhccc----CCcEEEecCCCCC-cccCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 217 KIKCITLR---------PPDFAIPIEELKSTISK----NTRAILMNTPHNP-TGKMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 217 ~~~~v~~~---------~~~~~~d~~~l~~~i~~----~~~~i~~~~p~NP-TG~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
.++.++.+ +.++.+|++.++++|++ ++++|.+.+++|- .|.++|.+++++|.++|++||+.||+|.
T Consensus 132 v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~Da 211 (450)
T TIGR02618 132 TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDA 211 (450)
T ss_pred EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 77777553 34588999999999986 3456777788885 4899999999999999999999999999
Q ss_pred cCCccc--c----CC--CCccc----cCCCCCCCceEEEccCChhhccccceeeeEE-eChhhHHHHHHHhhcc----cc
Q 013883 283 VYDKLA--F----EM--DHISI----ASLPGMYERTVTMNSLGKTFSLTGWKIGWAI-APPHLTWGVRQAHSFL----TF 345 (434)
Q Consensus 283 ay~~~~--~----~~--~~~~~----~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~-~~~~~~~~l~~~~~~~----~~ 345 (434)
+...-. + ++ ...++ ..+... -..+..|..|..+.+- .|+++ .++++.++++...-.. ++
T Consensus 212 AR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~--aD~~~~S~~Kd~~~~~--GG~l~~~d~~l~~k~r~~~~~~eG~~ty 287 (450)
T TIGR02618 212 TRCVENAYFIKEREQGYEDKSIAEILKEMMSY--ADGCTMSGKKDCLVNI--GGFLCMNDDEMFQSAKELVVVFEGMPSY 287 (450)
T ss_pred cchhhChhhhhcccccccCCCHHHHHHHHhcc--CcEEEEeeccCCCCCC--ceEEEeCCHHHHHHHHHHhhhcCCcccc
Confidence 986511 1 11 11222 111111 1247888999987551 36666 4688888877664221 22
Q ss_pred CC-chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCC------CCCCHHHHHHH
Q 013883 346 AT-STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF------GHETDIAFCEY 418 (434)
Q Consensus 346 ~~-~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 418 (434)
+. ..-...+++..|.+..+. ...+.-....++|.+.|.+.|+++..|.++..++++...+ ..-....++..
T Consensus 288 Ggla~r~~~ala~gL~e~~~~--~y~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ 365 (450)
T TIGR02618 288 GGLAGRDMEAMAIGIREAVDY--EYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAAS 365 (450)
T ss_pred CchhhhhHHHHHHHHHHhhhH--HHHHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHH
Confidence 22 222344445556542111 1122223356788888888899998888888888874332 11246678888
Q ss_pred HHHhcCeEE
Q 013883 419 LIKEVGVVA 427 (434)
Q Consensus 419 Ll~~~GV~v 427 (434)
|..+.||--
T Consensus 366 ly~~~gir~ 374 (450)
T TIGR02618 366 IYVETGVRS 374 (450)
T ss_pred HHHHhCccE
Confidence 888888753
No 251
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.79 E-value=2.3e-17 Score=159.34 Aligned_cols=301 Identities=18% Similarity=0.176 Sum_probs=204.4
Q ss_pred CCeeEeCCCCCCCC---CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFPNFD---GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p~~~---~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
+..|||..++-..- .+|.|.++++++++++.. |..+ .++.-.+|+++.+..+. .+ .|-++|++|||...
T Consensus 53 n~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~-fg~P---te~Ei~~Aell~~~~p~---~e-~vrfvnSGTEAtms 124 (432)
T COG0001 53 NEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLS-FGAP---TELEVELAELLIERVPS---IE-KVRFVNSGTEATMS 124 (432)
T ss_pred CEeeehhccCcccccCCCCHHHHHHHHHHHHhcCC-CCCC---CHHHHHHHHHHHHhcCc---cc-EEEEecchhHHHHH
Confidence 35788877754322 367799999999998754 4443 25556677777665442 35 79999999999988
Q ss_pred HHHHc--cCCCCeEEEcCCCchhHHHHHHH-cC-------------------CEEEEEEcCCCCCCCCHHHHHhhccc--
Q 013883 186 TILGL--INPGDEVILFAPFYDSYEATLSM-AG-------------------AKIKCITLRPPDFAIPIEELKSTISK-- 241 (434)
Q Consensus 186 ~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~-~G-------------------~~~~~v~~~~~~~~~d~~~l~~~i~~-- 241 (434)
+++.. ....|+|+..+-+|+++.+.+.. .| ..+..+|++ |++.+++++.+
T Consensus 125 AiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN------D~~al~~~~~~~g 198 (432)
T COG0001 125 AIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN------DLEALEEAFEEYG 198 (432)
T ss_pred HHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC------CHHHHHHHHHHcC
Confidence 87755 23458999999999998776543 22 123444444 79999998876
Q ss_pred -CCcEEEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccC-CCCccccCCCCCCCceEEEccCChhhcc
Q 013883 242 -NTRAILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMNSLGKTFSL 318 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 318 (434)
+..+|++.-...--|.++ .++.+++|.++|++||+++|+||+..+|... +.......+. +| +.+|.|.+|
T Consensus 199 ~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~--PD----lttlGKiIG- 271 (432)
T COG0001 199 DDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVE--PD----LTTLGKIIG- 271 (432)
T ss_pred CcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcC--cc----hhhhhhhhc-
Confidence 445565543333345644 4555999999999999999999999998755 3333333332 23 788999999
Q ss_pred ccceeeeEEeChhhHHHHHH---HhhccccCCchHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHhhhCCCEee
Q 013883 319 TGWKIGWAIAPPHLTWGVRQ---AHSFLTFATSTPMQWAATAALRAPE---TYYEELKRDYSAKKAILVEGLNAVGFKVF 392 (434)
Q Consensus 319 ~G~R~G~~~~~~~~~~~l~~---~~~~~~~~~~~~~q~a~~~~L~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 392 (434)
.|+.+|.+.+++++++++.. +.+..+++.++.+..|..+.|+... ..++.+.+.-.+.++-+.+.+.+.|+++.
T Consensus 272 GGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~ 351 (432)
T COG0001 272 GGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLT 351 (432)
T ss_pred CCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 99999999999999987753 3344578888888888888777532 23555555556666666667777777654
Q ss_pred -cCCeeEEEee-ec-CCC--------CCCCHHHHHHHHHHhcCeEEECCC
Q 013883 393 -PSSGTYFVVV-DH-TPF--------GHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 393 -~~~~~~~~~~-~~-~~~--------~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
...|+||.+. .- .+. +.+.-..+...|+++ ||++.|+.
T Consensus 352 v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~ 400 (432)
T COG0001 352 VNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQ 400 (432)
T ss_pred EeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCcc
Confidence 3445665432 21 111 111123466677766 99999985
No 252
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=4.9e-17 Score=164.16 Aligned_cols=310 Identities=12% Similarity=0.062 Sum_probs=188.2
Q ss_pred cCCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...||+..|.- .+. .+|.+.+++.+++.+..+...... ..+....+++.|.+..+. ..+ .+++++++++|+.
T Consensus 42 G~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~-~~~~~~~la~~L~~~~~~--~~~-~v~f~~SGseA~e 117 (433)
T PRK08117 42 GKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVI-YYESILKLAEELAEITPG--GLD-CFFFSNSGAEAIE 117 (433)
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccccc-CCHHHHHHHHHHHHhCCC--CCC-EEEEeCcHHHHHH
Confidence 346788877732 222 467888999998876322110011 124455566666554321 123 7999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHH-HcCC-------------EEEEEEcCCCC---CC--------CCHHHHHh
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLS-MAGA-------------KIKCITLRPPD---FA--------IPIEELKS 237 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~-~~G~-------------~~~~v~~~~~~---~~--------~d~~~l~~ 237 (434)
.+++... ...++|+..+-.|++...... ..+. .+..+|..... .+ -|++.+++
T Consensus 118 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 197 (433)
T PRK08117 118 GALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLES 197 (433)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHH
Confidence 9987532 223678888888887544332 1110 12233332100 00 14566666
Q ss_pred hcc-----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEcc
Q 013883 238 TIS-----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNS 311 (434)
Q Consensus 238 ~i~-----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S 311 (434)
.+. .+..+|++.......|.+ ++.+.+++|.++|++||+++|+||+|.+|...|.......+...+ .+.+
T Consensus 198 ~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~p----Di~t 273 (433)
T PRK08117 198 LFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVP----DIMT 273 (433)
T ss_pred HHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCC----CEee
Confidence 653 234556665556666775 477889999999999999999999999986665433222221122 2579
Q ss_pred CChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----
Q 013883 312 LGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV---- 387 (434)
Q Consensus 312 ~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~---- 387 (434)
|||.+| +|+++|++++++++.+.+.......+++.+++.+.++.++|+..++ +++.++++++.+.+++.|+++
T Consensus 274 ~sK~lg-~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~ 350 (433)
T PRK08117 274 IAKGIA-SGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKE--EKLLDNANEMGAYALERLEVLKEKH 350 (433)
T ss_pred hhhhcc-CCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999 9999999999999988775544555778889999999998885321 234445555555565555543
Q ss_pred CCEeecCCeeEEEeeecCCCCC----CCHHHHHHHHHHhcCeEEEC
Q 013883 388 GFKVFPSSGTYFVVVDHTPFGH----ETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 388 g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Ll~~~GV~v~p 429 (434)
++.......|.++.+.+.+... .....+.+.+++ .||.+.+
T Consensus 351 ~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~ 395 (433)
T PRK08117 351 PVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLE-KGLLFYL 395 (433)
T ss_pred CceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHH-CCCEEee
Confidence 3222233344455555432110 113345566654 5999876
No 253
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.78 E-value=1.5e-16 Score=157.11 Aligned_cols=276 Identities=22% Similarity=0.273 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCCCc
Q 013883 126 FVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-INPGDEVILFAPFY 204 (434)
Q Consensus 126 ~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p~y 204 (434)
...+++.+.++++..... ..-+.+|+++++++++ .+ +++.+++++.|+.+++.++ +++||+|+++..+|
T Consensus 6 e~~~~v~~~l~s~~~~~~-g~~~~~fE~~~a~~~g--------~~-~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~ 75 (363)
T PF01041_consen 6 EEIDAVLEVLRSGWLSTY-GPYVEEFEKEFAEYFG--------VK-YAVAVSSGTSALHLALRALGLGPGDEVIVPAYTF 75 (363)
T ss_dssp HHHHHHHHHHHHTCCSSS-SHHHHHHHHHHHHHHT--------SS-EEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-
T ss_pred HHHHHHHHHHHhCCccCC-CHHHHHHHHHHHHHhC--------CC-eEEEeCChhHHHHHHHHhcCCCcCceEecCCCcc
Confidence 445666777776532221 2235788999999887 44 7888899999999999998 58999999999999
Q ss_pred hhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcC
Q 013883 205 DSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284 (434)
Q Consensus 205 ~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay 284 (434)
......+..+|++++.++++++++.+|++.+++++++++++|++++ .-|... ++++|.++|++||++||+|.++
T Consensus 76 ~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h---~~G~~~---d~~~i~~~~~~~~i~lIeD~a~ 149 (363)
T PF01041_consen 76 PATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVH---LFGNPA---DMDAIRAIARKHGIPLIEDAAQ 149 (363)
T ss_dssp THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE----GGGB------HHHHHHHHHHTT-EEEEE-TT
T ss_pred hHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEec---CCCCcc---cHHHHHHHHHHcCCcEEEcccc
Confidence 9999999999999999999988999999999999999999998754 466655 7888999999999999999999
Q ss_pred Cccc-cCCCCccccCCCCCCCceEEEccC--ChhhccccceeeeEEeC-hhhHHHHHHHhhcc-----------------
Q 013883 285 DKLA-FEMDHISIASLPGMYERTVTMNSL--GKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFL----------------- 343 (434)
Q Consensus 285 ~~~~-~~~~~~~~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~----------------- 343 (434)
.... +.| ..+..+ + .+.+.|| +|.+. .|. .|+++.+ +++.++++.++...
T Consensus 150 a~g~~~~g--~~~G~~---g--d~~~fSf~~~K~i~-~ge-GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 220 (363)
T PF01041_consen 150 AFGARYKG--RPVGSF---G--DIAIFSFHPTKIIT-TGE-GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGY 220 (363)
T ss_dssp TTT-EETT--EETTSS---S--SEEEEESSTTSSS--SSS--EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--
T ss_pred ccCceeCC--EeccCC---C--CceEecCCCCCCCc-CCC-CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCc
Confidence 8754 222 122222 1 3667776 58885 443 5777875 66677777655422
Q ss_pred ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEee--cCCe---eEEEe-eecCCCCCCCHHHHH
Q 013883 344 TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVF--PSSG---TYFVV-VDHTPFGHETDIAFC 416 (434)
Q Consensus 344 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~---~~~~~-~~~~~~~~~~~~~~~ 416 (434)
.+..+.+....+..-|+. +++..++-+++.+.+.+.|.+. ++... ++.. .++.+ +.+.+....+-.++.
T Consensus 221 n~rm~~~~AAigl~QL~~----L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~ 296 (363)
T PF01041_consen 221 NFRMSELQAAIGLAQLKR----LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELV 296 (363)
T ss_dssp B-B-BHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHH
T ss_pred ccccHHHHHHHHHHHHHH----hhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHH
Confidence 122344444444555554 4555555566777788888876 44332 2222 23222 222221112466788
Q ss_pred HHHHHhcCeEEECCC
Q 013883 417 EYLIKEVGVVAIPTS 431 (434)
Q Consensus 417 ~~Ll~~~GV~v~pG~ 431 (434)
+.|.++ ||...+.-
T Consensus 297 ~~L~~~-GI~~~~~~ 310 (363)
T PF01041_consen 297 EALRAR-GIETRPHY 310 (363)
T ss_dssp HHHHHT-TBEEBCST
T ss_pred HHHHHC-CCcccccc
Confidence 888655 99988753
No 254
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.77 E-value=4e-17 Score=161.47 Aligned_cols=209 Identities=18% Similarity=0.201 Sum_probs=142.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHH----HHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE----ATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~ 223 (434)
...|+++++++.+ .+..+++++| +.++.+++ .++++||+|++++|.|++.. ..+...|++++.++.
T Consensus 52 ~~~Le~~la~l~g--------~~~al~~~SG-~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 52 RFALEELIADLEG--------GVKGFAFASG-LAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred HHHHHHHHHHHhC--------CCCEEEECCH-HHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 4567777777765 2225666565 66888666 57799999999999998654 345667888887754
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
. |++.+++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+. . ++ . .
T Consensus 122 ~------d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~--p~-~----~ 184 (380)
T PRK06176 122 S------DLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-N--PL-L----L 184 (380)
T ss_pred C------CHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-C--cc-c----c
Confidence 3 799999999999999999999999999885 667999999999999999999864332 1 11 1 1
Q ss_pred CceEEEccCChhhcccc-ceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTG-WKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G-~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+-.+++.|++|.++-+| .-.|+++++ +++.++++..+.......++...+.+...|+. +....++..++...+.
T Consensus 185 gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~t----l~~R~~~~~~~a~~la 260 (380)
T PRK06176 185 GADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKT----LGLRMEAHQKNALCVA 260 (380)
T ss_pred CCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccCc----HHHHHHHHHHHHHHHH
Confidence 33488999999996444 346777774 56666676666543333344443333333322 2223334444555556
Q ss_pred HHhhhC
Q 013883 382 EGLNAV 387 (434)
Q Consensus 382 ~~L~~~ 387 (434)
+.|++.
T Consensus 261 ~~L~~~ 266 (380)
T PRK06176 261 EFLEKH 266 (380)
T ss_pred HHHHhC
Confidence 666553
No 255
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.77 E-value=5.2e-16 Score=152.95 Aligned_cols=274 Identities=17% Similarity=0.149 Sum_probs=186.9
Q ss_pred HHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH-H
Q 013883 133 QAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT-L 211 (434)
Q Consensus 133 ~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~ 211 (434)
.++..+...|.....+.+|.++++++++ .+ .++.+++++.|+.+++...++|||+| +..+|...... +
T Consensus 65 a~~~vGDd~Yagd~s~~~LE~~vAe~lG--------~e-~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI 133 (460)
T PRK13237 65 AGMMIGDEAYAGSRNFYHLEETVQEYYG--------FK-HVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQ 133 (460)
T ss_pred HHHhhcchhhcCCCcHHHHHHHHHHHHC--------CC-eEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHH
Confidence 3344455679888888999999999987 44 68888888999998777778999965 55555554433 7
Q ss_pred HHcCCEEEEEEcC---------CCCCCCCHHHHHhhcccC----CcEEEecCCCCCc-ccCCCHHHHHHHHHHHHHcCcE
Q 013883 212 SMAGAKIKCITLR---------PPDFAIPIEELKSTISKN----TRAILMNTPHNPT-GKMFTREELNVIASLCIENDVL 277 (434)
Q Consensus 212 ~~~G~~~~~v~~~---------~~~~~~d~~~l~~~i~~~----~~~i~~~~p~NPT-G~~~~~e~l~~i~~la~~~~~~ 277 (434)
...|+..+.+..+ +.++.+|++.++++|+++ +++|.+..++|.. |...|.+++++|.++|++||+.
T Consensus 134 ~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~ 213 (460)
T PRK13237 134 ELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIK 213 (460)
T ss_pred HhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCE
Confidence 7888866655322 346889999999999763 3456667788888 7889999999999999999999
Q ss_pred EEEcCcCCcc----c------cCCCCcccc----CCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhhc
Q 013883 278 VFSDEVYDKL----A------FEMDHISIA----SLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSF 342 (434)
Q Consensus 278 iI~Deay~~~----~------~~~~~~~~~----~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~ 342 (434)
||+|.+...- . |.+ .++. .+.. .-.....|++|.++.+ . .|+++.+ +++.++++...-.
T Consensus 214 Vi~DaAra~gna~fI~~re~~y~~--~~i~ei~~e~~s--~aD~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~~~ 287 (460)
T PRK13237 214 VFFDATRCVENAYFIKEREEGYQD--KSIKEIVHEMFS--YADGCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELVVV 287 (460)
T ss_pred EEEECcchhcChhhhcccccccCC--CcHhHHhhhccC--cCcEEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhccc
Confidence 9999997632 1 111 1221 1111 1236677899999744 2 3777775 6677777665311
Q ss_pred ----cccCC-chHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCC------CC
Q 013883 343 ----LTFAT-STPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF------GH 409 (434)
Q Consensus 343 ----~~~~~-~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~------~~ 409 (434)
.+++. +.--..+++..|.+. .+|++. .....++|.+.|.+.|++++.|.||+-++++...+ ..
T Consensus 288 ~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~----ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~ 363 (460)
T PRK13237 288 YEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEH----RVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQ 363 (460)
T ss_pred cCCCcCCCChhhhHHHHHHhHHHhhchHHHHHH----HHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCccc
Confidence 12222 121344444445542 233333 33456788899999999999999999888864322 11
Q ss_pred CCHHHHHHHHHHhcCeEE
Q 013883 410 ETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 410 ~~~~~~~~~Ll~~~GV~v 427 (434)
-....++..|..+.||--
T Consensus 364 ~p~~al~~~ly~~~GiR~ 381 (460)
T PRK13237 364 FPAQALAAELYIESGVRS 381 (460)
T ss_pred ChHHHHHHHHHHHhCcCe
Confidence 246678888888888753
No 256
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.76 E-value=2.1e-16 Score=158.98 Aligned_cols=313 Identities=14% Similarity=0.114 Sum_probs=185.0
Q ss_pred cCCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE-cCChHHHH
Q 013883 108 KHGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV-TSGCTEAI 183 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~-t~G~~~ai 183 (434)
+...|||..|.-. +. .+|.+.+++++++......+... ...+.+..+++.+.+....+...+..+++ ++++++|+
T Consensus 38 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~-~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~ 116 (425)
T PRK09264 38 GKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLD-MHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAV 116 (425)
T ss_pred CCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccc-cCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHH
Confidence 3457888666322 22 36788889988887522111111 11244555666665432111111114655 58999999
Q ss_pred HHHHHHcc--CCCCeEEEcCCCchhHHHHHHHc-C------------CEEEEEEcCCC-CCC-CCHHHHHhhccc-----
Q 013883 184 AATILGLI--NPGDEVILFAPFYDSYEATLSMA-G------------AKIKCITLRPP-DFA-IPIEELKSTISK----- 241 (434)
Q Consensus 184 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G------------~~~~~v~~~~~-~~~-~d~~~l~~~i~~----- 241 (434)
+.+++... ...++|+.....|++........ | ..+..+|+... ... -|++.+++.+..
T Consensus 117 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~ 196 (425)
T PRK09264 117 EAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGV 196 (425)
T ss_pred HHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCC
Confidence 99887653 23467888888888865433222 1 12344444310 001 267788887743
Q ss_pred -CCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccc
Q 013883 242 -NTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
+..+|++.......|+ +++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+| +.+++|.+|..
T Consensus 197 ~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PD----i~t~~K~l~~~ 272 (425)
T PRK09264 197 DLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPD----IVTLSKSISGY 272 (425)
T ss_pred CceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCC----EEEeccccCCC
Confidence 3456666555666776 56888999999999999999999999998766554333332222233 45789999944
Q ss_pred cceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHH-HHHHHHHHHHHHHHHHHhhh----CC-CEeec
Q 013883 320 GWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYY-EELKRDYSAKKAILVEGLNA----VG-FKVFP 393 (434)
Q Consensus 320 G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~-~~~~~~~~~~~~~l~~~L~~----~g-~~~~~ 393 (434)
|+++|++++++++ ..+.......+++.++++..++.++|+.. +. .++.++++++.+.+++.|++ .+ +....
T Consensus 273 G~pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~--~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~v 349 (425)
T PRK09264 273 GLPMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEY--WSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEV 349 (425)
T ss_pred ccceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecc
Confidence 9999999999886 33332223346777777776666666421 11 13444555555555555543 22 21223
Q ss_pred CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 394 SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
...|+++++.+.+. .....++..+++ .||.+.|+.
T Consensus 350 rg~Gl~~~i~l~~~--~~~~~l~~~~~~-~Gv~~~~~~ 384 (425)
T PRK09264 350 RGRGMMQGIDFGDG--ELAGKIAAEAFE-NGLIIETSG 384 (425)
T ss_pred eecccEEEEEecCh--HHHHHHHHHHHH-CCCEEeccC
Confidence 34566777776421 124467777765 499998854
No 257
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.76 E-value=1.3e-16 Score=156.89 Aligned_cols=312 Identities=16% Similarity=0.149 Sum_probs=202.6
Q ss_pred cCCeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 108 KHGAINLGQG--FPNFD-GPDFVKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 108 ~~~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+...|||..| ...+. .+|.+.+++.+++.... ..+.... .+-..++++.|......+ ..+ .+++++++++|+
T Consensus 55 G~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~--~e~~v~~ae~L~~~~p~~-~~~-~~~f~~sGaeA~ 130 (447)
T COG0160 55 GNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLY--YEPYVELAEKLTALAPGS-GLK-KVFFGNSGAEAV 130 (447)
T ss_pred CCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCccc--chhHHHHHHHHHHhCCcc-cCC-eEEecCCcHHHH
Confidence 3457888775 33333 47889999998877632 2222221 244555566555433221 233 799999999999
Q ss_pred HHHHHHcc--CCCCeEEEcCCCchhHHHH-HHHcC-------------CEEEEEEcCCC--C-CCC--------CHHHHH
Q 013883 184 AATILGLI--NPGDEVILFAPFYDSYEAT-LSMAG-------------AKIKCITLRPP--D-FAI--------PIEELK 236 (434)
Q Consensus 184 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~-~~~~G-------------~~~~~v~~~~~--~-~~~--------d~~~l~ 236 (434)
+++++... ..+..|+...-.|++.... +...| ..+..+|+... + +.. ..+.++
T Consensus 131 E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e 210 (447)
T COG0160 131 EAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIE 210 (447)
T ss_pred HHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHH
Confidence 99987652 3346788888888874333 22211 23666666431 1 111 234455
Q ss_pred hhccc------CCcEEEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEE
Q 013883 237 STISK------NTRAILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTM 309 (434)
Q Consensus 237 ~~i~~------~~~~i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i 309 (434)
..+.. ++.++++...+...|.+. |.+.++++.++|++||+++|+||++.+|...|..+.+..+.-.+| +
T Consensus 211 ~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PD----i 286 (447)
T COG0160 211 RALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPD----I 286 (447)
T ss_pred HHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCC----E
Confidence 53422 456777776788888854 556699999999999999999999999999887777776654455 6
Q ss_pred ccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--
Q 013883 310 NSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-- 387 (434)
Q Consensus 310 ~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 387 (434)
-+++|.+| .|+.+|.+++.+++.+ ...-....+|+.++.+.+++.++|+..++ +.+.++..+.-+++++.|+++
T Consensus 287 vt~aK~ig-~G~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~--e~L~~~a~~~G~~l~~~L~~l~~ 362 (447)
T COG0160 287 VTLAKSLG-GGLPLSAVVGRAEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIEE--ENLLERAAELGEYLRDRLEELQE 362 (447)
T ss_pred EEeccccc-CCCceeEEeccHHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHh
Confidence 67999999 7999999999999987 44444446799999999999999985322 255666666777777777654
Q ss_pred CCEee--cCCeeEEEeeecCCCC------CCCHHHHHHHHHHhcCeEEECCCC
Q 013883 388 GFKVF--PSSGTYFVVVDHTPFG------HETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 388 g~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
..+.+ ...-|.++-+.+.... .+....++.+++++ |+.+..+..
T Consensus 363 ~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~-Glil~~~G~ 414 (447)
T COG0160 363 KHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFER-GLLLLTCGP 414 (447)
T ss_pred hcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHc-CCEEeccCC
Confidence 22222 2233555555554221 11234566666654 998877653
No 258
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.75 E-value=3.7e-17 Score=142.89 Aligned_cols=165 Identities=21% Similarity=0.190 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHH-HHHHHcCCEEEEEEcCCCC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE-ATLSMAGAKIKCITLRPPD 227 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~-~~~~~~G~~~~~v~~~~~~ 227 (434)
.++++.++++++ .+++ ++++++|+++++.+++.++.++|++|+++++.|+++. ..+...|++++.++.++.+
T Consensus 3 ~~~~~~l~~~~~------~~~~-~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 75 (170)
T cd01494 3 EELEEKLARLLQ------PGND-KAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAG 75 (170)
T ss_pred HHHHHHHHHHcC------CCCC-cEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCC
Confidence 578888888874 3355 7999999999999999999999999999999999988 8889999999999887532
Q ss_pred -CCCCHHHHHhhc-ccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCc
Q 013883 228 -FAIPIEELKSTI-SKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYER 305 (434)
Q Consensus 228 -~~~d~~~l~~~i-~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~ 305 (434)
...+++.+++.. .++++++++++++||+|...+. ++|.++|+++|+++|+|++|..+...... .... ..+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~---~~~~-~~~~ 148 (170)
T cd01494 76 YGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG---VLIP-EGGA 148 (170)
T ss_pred ccchhhhhhhhccccCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc---cccc-cccC
Confidence 222333554433 4578999999999999998865 67888899999999999999987654321 1111 2345
Q ss_pred eEEEccCChhhccccceeeeEEeC
Q 013883 306 TVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 306 ~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
.+++.|++|.++. .++|+++++
T Consensus 149 d~~~~s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 149 DVVTFSLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred CEEEEEcccccCC--CceEEEEeC
Confidence 6888999999983 779998863
No 259
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.75 E-value=6e-16 Score=155.78 Aligned_cols=308 Identities=15% Similarity=0.155 Sum_probs=184.9
Q ss_pred cCCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...+||..|.- .+. .+|.+.+++++++.+..+...... ..+.+..+++.+.+.... ..+ .+++++++++|++
T Consensus 41 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~--~~~-~v~f~~sGseA~e 116 (423)
T PRK05964 41 GRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGF-THEPAERLAQRLVALTPG--GLD-HVFFSDSGSVAVE 116 (423)
T ss_pred CCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcccccc-CCHHHHHHHHHHHHhCCC--CCC-EEEEeCCcHHHHH
Confidence 336788876622 222 367888899988876432111011 124456677777654421 124 7999999999999
Q ss_pred HHHHHccC-------CC-CeEEEcCCCchhHHHHHHHcCC-------------EEEEEEcCCCC-CCCCHHHHHhhccc-
Q 013883 185 ATILGLIN-------PG-DEVILFAPFYDSYEATLSMAGA-------------KIKCITLRPPD-FAIPIEELKSTISK- 241 (434)
Q Consensus 185 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~-~~~d~~~l~~~i~~- 241 (434)
.+++.... +| .+|+...-.|++.......... .+..+++...+ ...+++.+++.+..
T Consensus 117 ~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~ 196 (423)
T PRK05964 117 VALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH 196 (423)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC
Confidence 99876521 23 5788888888886544332211 12223332111 11127788887753
Q ss_pred --CCcEEEecC-CCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc
Q 013883 242 --NTRAILMNT-PHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS 317 (434)
Q Consensus 242 --~~~~i~~~~-p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 317 (434)
+..+|++.. .++..|..+ +.+.+++|.++|++||+++|+||++.++...|...........+| +.+++|.++
T Consensus 197 ~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pD----i~~~~K~l~ 272 (423)
T PRK05964 197 AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPD----IMCLSKGLT 272 (423)
T ss_pred CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCC----eeeeehhhh
Confidence 445666654 377788765 888999999999999999999999998765553322222211222 457899998
Q ss_pred ccc-ceeeeEEeChhhHHHHHHH------hhccccCCchHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHhhhC-
Q 013883 318 LTG-WKIGWAIAPPHLTWGVRQA------HSFLTFATSTPMQWAATAALRA--PETYYEELKRDYSAKKAILVEGLNAV- 387 (434)
Q Consensus 318 ~~G-~R~G~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~a~~~~L~~--~~~~~~~~~~~~~~~~~~l~~~L~~~- 387 (434)
.| +++|++++++++.+.+... ....+++.++++..++.++|+. .+++++ +..++-+.+++.|+++
T Consensus 273 -gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~----~~~~~g~~l~~~l~~l~ 347 (423)
T PRK05964 273 -GGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLE----RVAALSAGLAEGLEPFR 347 (423)
T ss_pred -cCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHhhc
Confidence 55 8999999999998877531 1223566788888888887773 233444 4444444455544443
Q ss_pred CCEe---ecCCeeEEEeeecCCCCC-CCHHHHHHHHHHhcCeEEECC
Q 013883 388 GFKV---FPSSGTYFVVVDHTPFGH-ETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 388 g~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~Ll~~~GV~v~pG 430 (434)
++.. +...|. ++.+.+..... .....+...|++ +||.+.|.
T Consensus 348 ~~~~i~~vrg~Gl-~~~i~l~~~~~~~~~~~l~~~l~~-~Gv~v~~~ 392 (423)
T PRK05964 348 DLPGVADVRVLGA-IGAVELDRPVLERDGPALRAFALE-RGVLLRPL 392 (423)
T ss_pred cCCCeEEeecccE-EEEEEeccCcchhHHHHHHHHHHH-CCeEEEec
Confidence 2221 233444 33344422110 014567777765 59999874
No 260
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.75 E-value=7.8e-16 Score=153.18 Aligned_cols=301 Identities=17% Similarity=0.130 Sum_probs=191.3
Q ss_pred cCCeeEeCCCC----CCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 108 KHGAINLGQGF----PNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 108 ~~~~i~l~~g~----p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+...+||..|. -++. +|.+.+++.+++.+..+.+.. ...++...+++.+.+..+ .+ .+++++++++|+
T Consensus 35 G~~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~~~~~~~~~--~~~~~~~~la~~l~~~~~----~~-~v~f~~SGseA~ 106 (395)
T PRK03715 35 GKRYLDFIQGWAVNCLGHC-NPGMVEALAAQAEKLINPSPA--FYNEPMAKLAGLLTQHSC----FD-KVFFANSGAEAN 106 (395)
T ss_pred CCEEEECCcChhhccCCCC-CHHHHHHHHHHHHhccccccc--ccCHHHHHHHHHHhhccC----CC-EEEEeCCcHHHH
Confidence 34678987652 2333 588898998888764333222 235677888888875432 24 799999999999
Q ss_pred HHHHHHcc------CCC-CeEEEcCCCchhHHH-HHHHcCCEEEEEEcCC--CCC----CCCHHHHHhhcccCCcEEEec
Q 013883 184 AATILGLI------NPG-DEVILFAPFYDSYEA-TLSMAGAKIKCITLRP--PDF----AIPIEELKSTISKNTRAILMN 249 (434)
Q Consensus 184 ~~~~~~l~------~~g-d~Vlv~~p~y~~~~~-~~~~~G~~~~~v~~~~--~~~----~~d~~~l~~~i~~~~~~i~~~ 249 (434)
..+++... ++| ++|+..+..|++... .+...|.........+ .++ ..|++.+++.+.+++++|++.
T Consensus 107 e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~E 186 (395)
T PRK03715 107 EGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLE 186 (395)
T ss_pred HHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEEe
Confidence 99988774 123 568888888877543 3333343211111110 111 247899999998778888887
Q ss_pred CCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEe
Q 013883 250 TPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 328 (434)
Q Consensus 250 ~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~ 328 (434)
..++..|... +.+.+++|.++|++||+++|+||++.+|...|.......+.-.+| +.+++|.+| .|+.+|.+++
T Consensus 187 pv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD----i~t~gK~lg-~G~p~~av~~ 261 (395)
T PRK03715 187 PVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD----IMTLGKGIG-GGVPLAALLA 261 (395)
T ss_pred CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc----eeeehhhhh-CCcceEEEEE
Confidence 6677778764 688899999999999999999999998765555433333322233 568899999 7899999999
Q ss_pred ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh----CCCEeecCCeeEEEeeec
Q 013883 329 PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA----VGFKVFPSSGTYFVVVDH 404 (434)
Q Consensus 329 ~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~ 404 (434)
++++.. +.......+++.+++...++.+.|+.-++ +++.++.+++.+++++.|++ .++..+...|. ++-+.+
T Consensus 262 ~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vrG~Gl-m~~i~l 337 (395)
T PRK03715 262 KAEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLA--PGFLEGVRARGEYLKEKLLELSEERGLEGERGEGL-LRALLL 337 (395)
T ss_pred cccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEEccee-EEEEEe
Confidence 988752 21111234667777777777777765321 23455566666666666654 35443444444 444444
Q ss_pred CCCCCCCHHHHHHHHHHhc---CeEEEC
Q 013883 405 TPFGHETDIAFCEYLIKEV---GVVAIP 429 (434)
Q Consensus 405 ~~~~~~~~~~~~~~Ll~~~---GV~v~p 429 (434)
.. .....+.+.+ .+. ||++.+
T Consensus 338 ~~---~~~~~~~~~~-~~~~~~Gi~~~~ 361 (395)
T PRK03715 338 GK---DIGPQIVEKA-RDMQPDGLLLNA 361 (395)
T ss_pred cC---chHHHHHHHH-HhccCCCEEEee
Confidence 22 1122333322 333 999864
No 261
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.75 E-value=7.3e-16 Score=155.63 Aligned_cols=311 Identities=12% Similarity=0.053 Sum_probs=186.7
Q ss_pred cCCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|.-. +. .+|.+.+++.+++....+.+... -..+.+.++++.+.+..+......+.+++++++++|++
T Consensus 38 G~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~-~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e 116 (442)
T TIGR00709 38 GKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLD-LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVE 116 (442)
T ss_pred CCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccc-cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHH
Confidence 3357888766322 22 36778889988887643221111 11355666777776654321111223566789999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHHc-C------------CEEEEEEcCCCCCCC--------CH----HHHHh
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSMA-G------------AKIKCITLRPPDFAI--------PI----EELKS 237 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G------------~~~~~v~~~~~~~~~--------d~----~~l~~ 237 (434)
.+++... ....+|+.....|++........ | ..+..+++.. .... +. +.+++
T Consensus 117 ~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 195 (442)
T TIGR00709 117 AAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPH-EYRCPFGIGGEAGSNASIEYFEN 195 (442)
T ss_pred HHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCc-cccccccCCchhHHHHHHHHHHH
Confidence 9987653 23467888888888876544332 2 1122333321 1111 11 12333
Q ss_pred hcc------cCCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEc
Q 013883 238 TIS------KNTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMN 310 (434)
Q Consensus 238 ~i~------~~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~ 310 (434)
.+. .+..++++...++..|. .++.+.+++|.++|++||+++|.||+|.+|.+.|.......+...+| +-
T Consensus 196 ~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PD----iv 271 (442)
T TIGR00709 196 FIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPD----FV 271 (442)
T ss_pred HHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCc----EE
Confidence 332 34566777655555555 57899999999999999999999999999977776555444433334 33
Q ss_pred cCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC---
Q 013883 311 SLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV--- 387 (434)
Q Consensus 311 S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 387 (434)
+++|.++ .|+++|+++++++ .+.+.......+++.++.+++++.++|+..++ +++.++.+++.+++.+.|+++
T Consensus 272 ~~gK~l~-~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~ 347 (442)
T TIGR00709 272 VMSKAVG-GGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKD--DNLAQNAQERGERITSFLDDMIKE 347 (442)
T ss_pred EEccccc-CCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3899999 6999999999887 44433222346788899999999999975221 234556666667776666643
Q ss_pred -CCE-eecCCeeEEEeeecCCCC--------CC----CHHHHHHHHHHhcCeEEECC
Q 013883 388 -GFK-VFPSSGTYFVVVDHTPFG--------HE----TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 388 -g~~-~~~~~~~~~~~~~~~~~~--------~~----~~~~~~~~Ll~~~GV~v~pG 430 (434)
++. -+...|.| +-+.+.+.. .. ....+...+++ +||++.++
T Consensus 348 ~~~v~~vrG~Gl~-~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~ 402 (442)
T TIGR00709 348 HPCIGNVRGRGLM-QGIMIVDERQSKDATGAYPRDCELAAAIQGACFE-NGLLLETG 402 (442)
T ss_pred CCCeeeeeccceE-EEEEEccCcccccccccCCcchHHHHHHHHHHHH-CCeEEeec
Confidence 322 22334444 334332110 00 12345555554 59999764
No 262
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.75 E-value=4.3e-16 Score=146.01 Aligned_cols=294 Identities=16% Similarity=0.174 Sum_probs=210.5
Q ss_pred eEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCC---CCCC----cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 112 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYA---RGHG----VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 112 i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~---~~~G----~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+..+..|.+...+|.+.+++.+.++....+-+ .+.| ..+|.+++|++.+ .+ ..++.+++.-|..
T Consensus 175 VWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq--------K~-aALlFsSCfVAND 245 (570)
T KOG1360|consen 175 VWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ--------KE-AALLFSSCFVAND 245 (570)
T ss_pred EEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc--------Cc-ceeeeeeeeeccc
Confidence 45555688888999999999999877321111 1122 3578888998876 33 3455555566666
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc----CCcEEEecCCCCCcccC
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK----NTRAILMNTPHNPTGKM 258 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----~~~~i~~~~p~NPTG~~ 258 (434)
..+..+. -||-+|+-..-.+....+.++..+.+-..+..+ |++.|++++.+ .+|+|-+.+.|..+|.+
T Consensus 246 stLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHN------D~~hL~~lL~~~~~svPKivAFEtVhSM~Gav 319 (570)
T KOG1360|consen 246 STLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHN------DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAV 319 (570)
T ss_pred hHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeeccC------CHHHHHHHHHhCCCCCCceEEEeeeeccCCCc
Confidence 6666653 478788888888888888888888776655544 78889988865 57888889999999999
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC-CCceEEEccCChhhccccceeeeEEeChhhHHHHH
Q 013883 259 FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM-YERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVR 337 (434)
Q Consensus 259 ~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~ 337 (434)
.|.| +|++++++||.+-++||++.-..|+...-.+..-++. ..-.|+.+++.|.||.-| ||+.+..++++.++
T Consensus 320 cple---elcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~~LvDmiR 393 (570)
T KOG1360|consen 320 CPLE---ELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATRKLVDMIR 393 (570)
T ss_pred CCHH---HHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhhhhHHHHHH
Confidence 9755 5999999999999999999987787544444333332 233577899999999888 99999999999999
Q ss_pred HHhhccccCC--chHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHH
Q 013883 338 QAHSFLTFAT--STPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIA 414 (434)
Q Consensus 338 ~~~~~~~~~~--~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (434)
.+.....|+. ++.....++.+++.. -+.-+.+|+..+++..++++.|.++|++|++...- ++-+.+- +.....+
T Consensus 394 SyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~~pSH-IiPv~vg--da~l~~~ 470 (570)
T KOG1360|consen 394 SYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIPNPSH-IIPVRVG--DAALAKQ 470 (570)
T ss_pred HhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccCCCcc-eeeeecc--CHHHHHH
Confidence 8776655554 444444455544431 11234567777888899999999999999765544 3333331 1123557
Q ss_pred HHHHHHHhcCeEEEC
Q 013883 415 FCEYLIKEVGVVAIP 429 (434)
Q Consensus 415 ~~~~Ll~~~GV~v~p 429 (434)
.+..|+.++||||-.
T Consensus 471 ~sd~Li~~h~iYvQa 485 (570)
T KOG1360|consen 471 ASDILISKHNIYVQA 485 (570)
T ss_pred HHHHHHHhcCeEEEe
Confidence 888899999999853
No 263
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=2.4e-16 Score=158.21 Aligned_cols=155 Identities=17% Similarity=0.223 Sum_probs=121.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHH----HHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE----ATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~ 223 (434)
..+|++.++++.+ .+ ..++++++++|+.+++.+++++||+|+++.+.|.+.. ..+...|++++.++.
T Consensus 65 ~~~le~~lA~l~g--------~~-~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 65 NAVLEERVAALEG--------GT-AALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred HHHHHHHHHHHhC--------CC-cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 3567777777765 23 4677788899999999999999999999999998643 346678999988865
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
. |++.+++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..... ...+ ..
T Consensus 136 ~------d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~------~~pl--~~ 198 (427)
T PRK05994 136 D------DPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL------IRPI--EH 198 (427)
T ss_pred C------CHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc------CCcc--cc
Confidence 3 789999999999999999999999999985 67799999999999999999974221 1111 12
Q ss_pred CceEEEccCChhhccccceeeeEEe
Q 013883 304 ERTVTMNSLGKTFSLTGWKIGWAIA 328 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~G~~~~ 328 (434)
+-.+++.|++|.+|-+|-.+|.+++
T Consensus 199 gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 199 GADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred CCcEEEEcCccccCCCCCcEEEEEE
Confidence 3448899999999755655665554
No 264
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.73 E-value=1.4e-15 Score=153.56 Aligned_cols=311 Identities=16% Similarity=0.146 Sum_probs=185.2
Q ss_pred cCCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|.- .+. .+|.+.+++.+++.+..+ +.......+...++++.+.+..+... .+ .+++++++++|++
T Consensus 41 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~-~~~~~~~~~~~~~lae~L~~~~p~~~-~~-~v~f~~SGseA~e 117 (445)
T PRK08593 41 GKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIH-YTPAYMYHEPLVRLAKKLCELAPGDF-EK-RVTFGLSGSDAND 117 (445)
T ss_pred CCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccC-ccccccCCHHHHHHHHHHHHhCCCCC-CC-EEEECCchHHHHH
Confidence 335788866521 222 368888899988876322 11111123445556666655432111 13 7999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHH-HcCC-------------EEEEEEcCCC-C--CC-CC-------HHHHHh
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLS-MAGA-------------KIKCITLRPP-D--FA-IP-------IEELKS 237 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~-~~G~-------------~~~~v~~~~~-~--~~-~d-------~~~l~~ 237 (434)
.+++... ....+|+..+..|++...... ..+. .+..+|+.+. . +. .+ ++.+++
T Consensus 118 ~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 197 (445)
T PRK08593 118 GIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKE 197 (445)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHH
Confidence 9987542 223568888888888644332 2221 1233433210 0 00 11 234444
Q ss_pred hcc-----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEcc
Q 013883 238 TIS-----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNS 311 (434)
Q Consensus 238 ~i~-----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S 311 (434)
.+. +++.+|++....+..|.+ ++.+.+++|.++|++||+++|+||+|.+|...|.......+.-.+| +.+
T Consensus 198 ~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD----i~t 273 (445)
T PRK08593 198 MFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD----LMS 273 (445)
T ss_pred HHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC----Eee
Confidence 342 356677777667777886 6888899999999999999999999998866554333333322233 558
Q ss_pred CChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh----C
Q 013883 312 LGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA----V 387 (434)
Q Consensus 312 ~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~----~ 387 (434)
++|.+| .|+++|++++++++.+.+.......+++.++....++.+.|+..++ +++.++.+++-+++++.|++ .
T Consensus 274 ~gK~l~-~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~ 350 (445)
T PRK08593 274 FGKSLA-GGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIED--ESLLQRSAEKGEYARKRFDQWVSKY 350 (445)
T ss_pred eccccc-CCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999 8899999999999988775333345777888888888888875321 12344444444455555543 3
Q ss_pred CCEeecCCeeEEEeeecCCC---CCC---CHHHHHHHHHHhcCeEEEC
Q 013883 388 GFKVFPSSGTYFVVVDHTPF---GHE---TDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 388 g~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~Ll~~~GV~v~p 429 (434)
++......-|.++-+.+.+. ... ....++..+++ +||++.+
T Consensus 351 ~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~ 397 (445)
T PRK08593 351 NFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFE-HGVVIIA 397 (445)
T ss_pred CcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHH-CCeEEec
Confidence 33222222333333333211 110 12456667765 5999976
No 265
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.73 E-value=1.1e-15 Score=154.55 Aligned_cols=302 Identities=16% Similarity=0.138 Sum_probs=184.6
Q ss_pred cCCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...||+..|.-. +. .+|.+.+++.+++.+... +... .+++..+++.+.+.... .+ .+.++++++||..
T Consensus 98 G~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~-~~~~---~~~~~~lAe~l~~~~p~---~~-~v~f~~SGsEA~e 169 (474)
T PLN02482 98 GNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTS-FGAP---CLLENVLAEMVIDAVPS---VE-MVRFVNSGTEACM 169 (474)
T ss_pred CCEEEEecccccccccCCCCHHHHHHHHHHHhhCCC-CCCC---CHHHHHHHHHHHHhCCC---CC-EEEEeCChHHHHH
Confidence 3457888766322 22 368899999999887542 2221 24566677777655421 34 7999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHHc---CC-----------------EEEEEEcCCCCCCCCHHHHHhhccc-
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSMA---GA-----------------KIKCITLRPPDFAIPIEELKSTISK- 241 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~---G~-----------------~~~~v~~~~~~~~~d~~~l~~~i~~- 241 (434)
.+++... ...++|+...-.|+++.+.+... |. .+..+|+ -|++.+++.+..
T Consensus 170 ~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------nd~~~l~~~l~~~ 243 (474)
T PLN02482 170 GVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY------NDLEAVKKLFEAN 243 (474)
T ss_pred HHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC------CChHHHHHHHHhC
Confidence 9887653 23467888888898865432110 10 0111111 168888888853
Q ss_pred --CCcEEEecCCCCCcccCCC-HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcc
Q 013883 242 --NTRAILMNTPHNPTGKMFT-REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSL 318 (434)
Q Consensus 242 --~~~~i~~~~p~NPTG~~~~-~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 318 (434)
+..+|++.......|.+.+ ++.|++|.++|++||+++|+||++.+| ..+.......+.-.+| +.+|+|.+|
T Consensus 244 ~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PD----i~t~gK~lg- 317 (474)
T PLN02482 244 KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPD----LTTLGKVIG- 317 (474)
T ss_pred CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCC----EEEecchhh-
Confidence 3456666555666787654 677999999999999999999999887 4433222222222233 468899999
Q ss_pred ccceeeeEEeChhhHHHHHHH---hhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEee-
Q 013883 319 TGWKIGWAIAPPHLTWGVRQA---HSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVF- 392 (434)
Q Consensus 319 ~G~R~G~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~- 392 (434)
.|+.+|.+++++++++.+... ....+++.+++...++.+.|+.. ++.++++.+.-+..++.|.+...+.|+.+.
T Consensus 318 gG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~ 397 (474)
T PLN02482 318 GGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCG 397 (474)
T ss_pred CCCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 899999999999998877532 12346667788877777777642 223333333333334444443344455544
Q ss_pred cCCeeEEE-eeecCCC-C-----CCC---HHHHHHHHHHhcCeEEECC
Q 013883 393 PSSGTYFV-VVDHTPF-G-----HET---DIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 393 ~~~~~~~~-~~~~~~~-~-----~~~---~~~~~~~Ll~~~GV~v~pG 430 (434)
...++++. .+.-.+. . ..+ ...+...+++ +||++.|.
T Consensus 398 ~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~~~~~ 444 (474)
T PLN02482 398 GYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLE-EGVYLAPS 444 (474)
T ss_pred cccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHH-CCeEEecc
Confidence 33344442 2211110 0 001 2356666766 49999874
No 266
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.72 E-value=2.1e-15 Score=151.32 Aligned_cols=300 Identities=15% Similarity=0.114 Sum_probs=186.6
Q ss_pred cCCeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQG--FPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...+||..| ...+. .+|.+.+++.+++.+..+. ...-..+.+..+++.+.+..... .+ .++++++++||++
T Consensus 74 G~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~--~~~~~~~~~~~lAe~L~~~~p~~--~~-~v~f~~SGsEA~e 148 (442)
T TIGR03372 74 GNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLH--SQELLDPLRALLAKTLAALTPGK--LK-YSFFCNSGTESVE 148 (442)
T ss_pred CCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCc--ccccCCHHHHHHHHHHHHhCCCC--cC-EEEEeCCchHHHH
Confidence 3456888666 33333 3677888998888764321 11112345556666666543221 13 7899999999999
Q ss_pred HHHHHccC-----CCCeEEEcCCCchhHHHHHHHcCCE-------------EEEEEcCCCCCCCCHHHHHhhcc------
Q 013883 185 ATILGLIN-----PGDEVILFAPFYDSYEATLSMAGAK-------------IKCITLRPPDFAIPIEELKSTIS------ 240 (434)
Q Consensus 185 ~~~~~l~~-----~gd~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~d~~~l~~~i~------ 240 (434)
.+++.... ....|+.....|++..........+ +..+|+ .|.+.+++.+.
T Consensus 149 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~------~d~~~~~~~l~~~~~~~ 222 (442)
T TIGR03372 149 AALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF------GDIEAMLKALNECKKTG 222 (442)
T ss_pred HHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC------CCHHHHHHHHHHHhcCC
Confidence 99875532 2367888899888865443332211 122222 25677776663
Q ss_pred cCCcEEEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccc
Q 013883 241 KNTRAILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 241 ~~~~~i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
.+..+|++.......|... +++.+++|.++|++||+++|+||++.+|...|..+....+.-.+| +.+++|.+| .
T Consensus 223 ~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PD----ivt~gK~lg-~ 297 (442)
T TIGR03372 223 DDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPD----ILCLAKALG-G 297 (442)
T ss_pred CcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCC----eeeehhhhc-C
Confidence 2345666655566667755 677799999999999999999999998766665444433332344 445999999 8
Q ss_pred c-ceeeeEEeChhhHHHHHH--HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----C-C-E
Q 013883 320 G-WKIGWAIAPPHLTWGVRQ--AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----G-F-K 390 (434)
Q Consensus 320 G-~R~G~~~~~~~~~~~l~~--~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g-~-~ 390 (434)
| +.+|.+++++++.+.+.. .....+++.++.+..++.++|+..++ +++.++.+++-+++++.|+++ + . .
T Consensus 298 G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~ 375 (442)
T TIGR03372 298 GVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLE--KNLPAQAAIKGDFLLDGFQQLAAEYPDLII 375 (442)
T ss_pred CcccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 8 589999999998877632 12345777788888888888875321 123344455555555555443 2 1 2
Q ss_pred eecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 391 VFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
-+... |.++-+.+... .....+++.|++ +||++.+
T Consensus 376 ~vRG~-Gl~~giel~~~--~~~~~i~~~l~~-~Gvl~~~ 410 (442)
T TIGR03372 376 EARGK-GLLMAIEFRDN--EIGYAFAKELFQ-QNILVAG 410 (442)
T ss_pred EEecc-eEEEEEEeCCh--HHHHHHHHHHHH-CCcEEee
Confidence 22333 44445554321 123567777776 5999975
No 267
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=9.2e-16 Score=153.85 Aligned_cols=155 Identities=17% Similarity=0.216 Sum_probs=123.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~ 223 (434)
..+|++.++++.+ .+ ..++++++++|+.+++.+++++||+|+++...|......+ ...|++++.++.
T Consensus 66 ~~~le~~lA~l~g--------~~-~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 66 VAVLEERVAALEG--------GV-GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHhC--------CC-cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 4577888887765 23 4688888999999999999999999999999998765543 458999988875
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
+ |++.+++++++++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|.++...... .++ ..
T Consensus 137 ~------d~~~l~~~i~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~---~pl-----~~ 199 (433)
T PRK08134 137 G------DIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLL---RPF-----EH 199 (433)
T ss_pred C------CHHHHHHhcCCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccC---Cch-----hc
Confidence 4 799999999999999999999999999985 677999999999999999998643211 111 12
Q ss_pred CceEEEccCChhhccccceeeeEEe
Q 013883 304 ERTVTMNSLGKTFSLTGWKIGWAIA 328 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~G~~~~ 328 (434)
+-.+++.|.+|.+|-+|-.+|.++.
T Consensus 200 GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 200 GADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred CCCEEEeccccccCCCCCceEEEEE
Confidence 3458899999999766665666554
No 268
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.72 E-value=3.6e-15 Score=151.30 Aligned_cols=300 Identities=13% Similarity=0.105 Sum_probs=182.1
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCC-CCCCC---CC---cHHHHHHHHHHHHhhcCCCCCCCCcEEEc---CCh
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKN-QYARG---HG---VPEFNSAIASRFKKDSGLEVDPEKEVTVT---SGC 179 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~-~Y~~~---~G---~~~lr~~ia~~l~~~~g~~~~~~~~i~~t---~G~ 179 (434)
+.|+|-..++- .++.+++++...+.+... .|+.. .| ...+.+...+.+.+.+| .+++ ++.++ +++
T Consensus 35 ~~l~l~~sen~--~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~--a~~~-~~~~~~~~~sg 109 (452)
T PTZ00094 35 EGLELIASENF--TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFG--LDPE-EWGVNVQPYSG 109 (452)
T ss_pred cCeeEeccccc--CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhC--CCcc-cceeecCCCch
Confidence 67888655432 356677777666654211 11111 12 22222212223333344 3455 56555 788
Q ss_pred HHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH----------cCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEe
Q 013883 180 TEAIAATILGLINPGDEVILFAPFYDSYEATLSM----------AGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILM 248 (434)
Q Consensus 180 ~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----------~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~ 248 (434)
++++..++.+++++||.|++....+..+...... .+.++..++.+. ++.+|++.++++++. +++++++
T Consensus 110 t~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~-~g~id~~~L~~~l~~~~~~lvi~ 188 (452)
T PTZ00094 110 SPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE-KGLIDYDKLEELAKAFRPKLIIA 188 (452)
T ss_pred HHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC-CCCcCHHHHHHHHHHhCCCEEEE
Confidence 9999999999999999999987777665432211 112334444554 588999999999965 6777665
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEe
Q 013883 249 NTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 328 (434)
Q Consensus 249 ~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~ 328 (434)
. ++.+|...+ +++|.++|+++|+++++|+++.......+.... .+ .+..+++.|.+|+++ |.+.|++++
T Consensus 189 ~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~-~~---~~~D~l~~S~hK~l~--GP~Gg~l~~ 257 (452)
T PTZ00094 189 G--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPS-PF---PYADVVTTTTHKSLR--GPRSGLIFY 257 (452)
T ss_pred e--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCC-CC---CCCcEEEcCCccCCC--CCCceEEEE
Confidence 3 445998885 556788899999999999999875543321111 11 134588999999873 444588888
Q ss_pred ChhhHHHHHHHhhcc--c---cCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCC-eeEEEe
Q 013883 329 PPHLTWGVRQAHSFL--T---FATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSS-GTYFVV 401 (434)
Q Consensus 329 ~~~~~~~l~~~~~~~--~---~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~ 401 (434)
++++.+.+....... + .+++.....++..+|+.. ....++.++++.++++.+.+.|.+.|+++..+. ......
T Consensus 258 ~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~~~~~~ 337 (452)
T PTZ00094 258 RKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGTDNHLVL 337 (452)
T ss_pred ecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCCCceEe
Confidence 776654443221111 1 133444455555556543 223556778889999999999988898876422 122344
Q ss_pred eecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 402 VDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 402 ~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
+.+...+. +..++...| +++||.+.
T Consensus 338 v~~~~~~~-~~~~~~~~L-~~~gI~vs 362 (452)
T PTZ00094 338 VDLRPFGI-TGSKMEKLL-DAVNISVN 362 (452)
T ss_pred ecCCcCCC-CHHHHHHHH-HHCCcEEe
Confidence 44433333 355555555 77899994
No 269
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.71 E-value=5.8e-15 Score=148.05 Aligned_cols=295 Identities=17% Similarity=0.161 Sum_probs=183.8
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCC-----CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGK-----NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~-----~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
.+.+.|..+.-+ +.|+.+.+++.+.+.... ..+....+...+.+++.+ + +..| .+++ +|++++|+++++
T Consensus 26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g--~~~~-~v~~~~~~t~~l 99 (406)
T TIGR01814 26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVG--AKED-EVVVMNTLTINL 99 (406)
T ss_pred CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccC--CCCC-cEEEeCCchHHH
Confidence 357888866544 347778888876654311 111101122233333322 2 3444 4566 899999999999
Q ss_pred HHHHHHccCCC---CeEEEcCCCchhHHH----HHHHcCCEE----EEEEcCCCCCCCCHHHHHhhcc---cCCcEEEec
Q 013883 184 AATILGLINPG---DEVILFAPFYDSYEA----TLSMAGAKI----KCITLRPPDFAIPIEELKSTIS---KNTRAILMN 249 (434)
Q Consensus 184 ~~~~~~l~~~g---d~Vlv~~p~y~~~~~----~~~~~G~~~----~~v~~~~~~~~~d~~~l~~~i~---~~~~~i~~~ 249 (434)
..++.++++++ +.|++.+..|+.... .++..|+++ +.++.++ ++.+|++.+++.++ +++++|+++
T Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~-~g~~~~~~l~~~~~~~~~~t~lv~~~ 178 (406)
T TIGR01814 100 HLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPRE-EETLRLEDILDTIEKNGDDIAVILLS 178 (406)
T ss_pred HHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCC-CCccCHHHHHHHHHhcCCCeEEEEEe
Confidence 99999887664 357888888887332 345678887 3454442 56788999988774 689999999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc-cccceeeeEEe
Q 013883 250 TPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIA 328 (434)
Q Consensus 250 ~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~ 328 (434)
+++|.||..++ +++|+++|+++|+++++|+++..... ...+.. .+-.+++.|..|.++ -+| .| ++.
T Consensus 179 ~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~~---~id~~~----~gvD~~~~s~hK~l~g~pG--~~-l~v 245 (406)
T TIGR01814 179 GVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGNV---PLDLHD----WGVDFACWCTYKYLNAGPG--AG-AFV 245 (406)
T ss_pred ccccccceecC---HHHHHHHHHHcCCEEEEEcccccCCc---cccccc----CCCCEEEEcCccccCCCCC--eE-EEE
Confidence 99999999995 67788999999999999999986321 122221 234588999999874 244 33 443
Q ss_pred ChhhHHHHHHH-h----------------------hccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHh
Q 013883 329 PPHLTWGVRQA-H----------------------SFLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGL 384 (434)
Q Consensus 329 ~~~~~~~l~~~-~----------------------~~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L 384 (434)
.++....+... . ++...+++.+...++..+|+.. +..+++.+++.++..+++++.|
T Consensus 246 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 325 (406)
T TIGR01814 246 HEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELI 325 (406)
T ss_pred ehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 33322222110 0 0011234455555555566532 2235667788888888888888
Q ss_pred hhC-----CCEeecCC-----eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 385 NAV-----GFKVFPSS-----GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 385 ~~~-----g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
++. |+.+..+. ++++ .+.++ . +..+++++|.+ +||.+..
T Consensus 326 ~~~~~~~~~~~i~~~~~~~~r~~~v-~~~~~---~-~~~~~~~~L~~-~gi~v~~ 374 (406)
T TIGR01814 326 KARCGGPPVLTIITPRDHAQRGCQL-SLTHP---V-PGKAVFQALIK-RGVIGDK 374 (406)
T ss_pred HhhcCCCCceEEeCCCChhhcCCeE-EEEec---C-CHHHHHHHHHH-CCEEEec
Confidence 764 36666442 2333 33332 1 46678888854 5998764
No 270
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.71 E-value=9.6e-15 Score=147.96 Aligned_cols=304 Identities=13% Similarity=0.078 Sum_probs=180.5
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCC-----C-CCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE---cCCh
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD-GKN-----Q-YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV---TSGC 179 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~-----~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~---t~G~ 179 (434)
..|+|--.++ ...+.+++++...+.+ -.. + |+....+.++.+...+...+.++.. .+ .+.+ .+++
T Consensus 35 ~~l~liasen--~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~--~~-~~~~nv~~~SG 109 (475)
T PLN03226 35 KGLELIASEN--FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLD--PE-KWGVNVQPLSG 109 (475)
T ss_pred cCeeEecCCc--cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCC--cc-eeEEecCcCch
Confidence 5566644332 1356677777777633 111 2 2222233344443333344444432 22 3333 2566
Q ss_pred HHHHHHHHHHccCCCCeEEEcCC---CchhHHHHHHH---cCCE--EE--EEEcCCCCCCCCHHHHHhhccc-CCcEEEe
Q 013883 180 TEAIAATILGLINPGDEVILFAP---FYDSYEATLSM---AGAK--IK--CITLRPPDFAIPIEELKSTISK-NTRAILM 248 (434)
Q Consensus 180 ~~ai~~~~~~l~~~gd~Vlv~~p---~y~~~~~~~~~---~G~~--~~--~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~ 248 (434)
+.|+..++.++++|||+|+..+. .|..|...... .+.. +. .++.+++++.+|++++++.+.. ++++|++
T Consensus 110 ~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~ 189 (475)
T PLN03226 110 SPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIA 189 (475)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEE
Confidence 88999999999999999998553 44444332211 1222 22 3344556788999999998864 6776655
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEe
Q 013883 249 NTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 328 (434)
Q Consensus 249 ~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~ 328 (434)
. .++ +|... ++++|.++|+++|+++++|+++.......+... ..+ ....+++.|++|+++ |.+.|++++
T Consensus 190 ~-~S~-~s~~~---D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~-~p~---~~~Div~~t~hK~L~--GP~Gg~I~~ 258 (475)
T PLN03226 190 G-ASA-YPRDW---DYARMRKIADKVGALLMCDMAHISGLVAAQEAA-SPF---EYCDVVTTTTHKSLR--GPRGGMIFF 258 (475)
T ss_pred e-cCc-CCCcc---CHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC-CCC---CCCeEEEecCccccc--CCCceEEEE
Confidence 3 333 66666 466788999999999999999986554432211 111 134488999999983 455589888
Q ss_pred ChhhH-----------HHHHHHhh---cc-ccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEee
Q 013883 329 PPHLT-----------WGVRQAHS---FL-TFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVF 392 (434)
Q Consensus 329 ~~~~~-----------~~l~~~~~---~~-~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 392 (434)
+++.+ +....... .. ..+++.....++..+|+.. ....++.+++..++.++|.+.|.+.|++++
T Consensus 259 ~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~ 338 (475)
T PLN03226 259 RKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLV 338 (475)
T ss_pred chhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 87544 22111111 11 1223333333444445532 122456678889999999999999999987
Q ss_pred cC-CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 393 PS-SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 393 ~~-~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
.+ ..+..+++++.+.+. ++.++.+ .+++.||.+..+.
T Consensus 339 ~~~t~~hi~lv~~~~~gi-~~~~~~~-~L~~~~I~~nk~~ 376 (475)
T PLN03226 339 TGGTDNHLVLWDLRPLGL-TGSRVEK-VLDLAHITLNKNA 376 (475)
T ss_pred cCCCCCCEEEEEccCCCC-CHHHHHH-HHHHCCCEECCCC
Confidence 63 235677788766655 3544544 4577899997653
No 271
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.71 E-value=1.4e-15 Score=152.64 Aligned_cols=310 Identities=15% Similarity=0.113 Sum_probs=181.5
Q ss_pred cCCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...||+..|+-. +. .+|.+.+++.+++........+ .+.+..+++.+.+..+. ..+ .+.+++++++|++
T Consensus 52 G~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~----~~~~~~la~~L~~~~~~--~~~-~v~f~~SGsEA~e 124 (433)
T PRK00615 52 GKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGLT----SEQEILFAEELFSYLGL--EDH-KIRFVSSGTEATM 124 (433)
T ss_pred CCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCCC----CHHHHHHHHHHHHhCCC--CcC-EEEEeCchHHHHH
Confidence 3357888766322 22 3688888999888764321111 23445566666544432 124 7999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHH----HHHcCCE---E-EEE--EcCCCC----CCCCHHHHHhhccc---CCcE
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEAT----LSMAGAK---I-KCI--TLRPPD----FAIPIEELKSTISK---NTRA 245 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~----~~~~G~~---~-~~v--~~~~~~----~~~d~~~l~~~i~~---~~~~ 245 (434)
.+++... ....+|+...-.|+++.+. ....+.. . ..+ +..... ..-|++.+++.+.. +..+
T Consensus 125 ~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aa 204 (433)
T PRK00615 125 TAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAG 204 (433)
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEE
Confidence 9987653 2235788888888886422 1111100 0 000 000000 01267888888753 3455
Q ss_pred EEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceee
Q 013883 246 ILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIG 324 (434)
Q Consensus 246 i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G 324 (434)
|++.......|... +++.+++|.++|++||+++|+||++.++ ..|.......+.-.+| +.+|+|.+| .|+.+|
T Consensus 205 vI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PD----i~~~gK~lg-gG~p~~ 278 (433)
T PRK00615 205 VIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPD----ITVYGKILG-GGLPAA 278 (433)
T ss_pred EEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCC----eEEEccccc-CCccee
Confidence 66655466667755 5677999999999999999999999887 3343222222222233 335899998 788899
Q ss_pred eEEeChhhHHHHHHHh---hccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEE
Q 013883 325 WAIAPPHLTWGVRQAH---SFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYF 399 (434)
Q Consensus 325 ~~~~~~~~~~~l~~~~---~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 399 (434)
++++++++++.+.... ...+++.++....++.+.|+.. ++.++++.+.-...++.|++.+.+.|+.+.....|.+
T Consensus 279 av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~ 358 (433)
T PRK00615 279 AVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSM 358 (433)
T ss_pred eeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceE
Confidence 9999999988775321 2235666788888888877642 2223333333333344445555555654322123444
Q ss_pred EeeecCCCCC-----------CCHHHHHHHHHHhcCeEEECCC
Q 013883 400 VVVDHTPFGH-----------ETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 400 ~~~~~~~~~~-----------~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.+.+..... +....+...|+++ ||++.|+.
T Consensus 359 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~ 400 (433)
T PRK00615 359 FSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSK-GVYLSPSP 400 (433)
T ss_pred EEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHC-CeeecCcc
Confidence 4444422110 0123566777665 99998863
No 272
>PRK07482 hypothetical protein; Provisional
Probab=99.70 E-value=5.6e-15 Score=149.72 Aligned_cols=310 Identities=14% Similarity=0.063 Sum_probs=186.5
Q ss_pred cCCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCC-CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 108 KHGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARG-HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 108 ~~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+...|||..|.- .+. .+|.+.+++.+++++..+ +... .-..+.+..+++.+.+.... +.+ .+++++++++|+
T Consensus 49 G~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~-~~~~~~~~~~~~~~lAe~L~~~~p~--~~~-~v~f~~sGSEAv 124 (461)
T PRK07482 49 GRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAY-YHTYVGHGTEASITLSKRIIDRAPA--GMS-KVYYGLSGSDAN 124 (461)
T ss_pred CCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCc-cccccccCCHHHHHHHHHHHHhCCC--CcC-EEEEeCchHHHH
Confidence 346788877632 122 367888899998876421 1111 11235566677777654322 234 799999999999
Q ss_pred HHHHHHcc------C-C-CCeEEEcCCCchhHHHHHHHc-CC------------EEEEEEcCCC-C---CC--------C
Q 013883 184 AATILGLI------N-P-GDEVILFAPFYDSYEATLSMA-GA------------KIKCITLRPP-D---FA--------I 230 (434)
Q Consensus 184 ~~~~~~l~------~-~-gd~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~-~---~~--------~ 230 (434)
+.+++... . + ..+|+.....|++.......+ |. .+..++.... . .+ .
T Consensus 125 e~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 204 (461)
T PRK07482 125 ETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAY 204 (461)
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHH
Confidence 99988653 1 2 357888888888854322221 10 1122221110 0 00 1
Q ss_pred CHHHHHhhcc----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCc
Q 013883 231 PIEELKSTIS----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYER 305 (434)
Q Consensus 231 d~~~l~~~i~----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~ 305 (434)
+++.+++.+. +++.+|++...+...|++ ++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 205 ~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PD- 283 (461)
T PRK07482 205 CADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPD- 283 (461)
T ss_pred HHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCC-
Confidence 3577777773 245666665556666776 5677899999999999999999999999976665544444433344
Q ss_pred eEEEccCChhhccccc-eeeeEEeChhhHHHHHHH-------hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 013883 306 TVTMNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQA-------HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKK 377 (434)
Q Consensus 306 ~i~i~S~SK~~g~~G~-R~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 377 (434)
+-+++|.++ .|+ .+|.+++.+++.+.+... ....+++.++++.+++.+.|+..++ +++.++.+++-
T Consensus 284 ---iv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~--~~l~~~~~~~g 357 (461)
T PRK07482 284 ---LITVAKGLT-SAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILER--ENLVGNAAEVG 357 (461)
T ss_pred ---EEEEccccc-cCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHH
Confidence 555799998 785 899999999887766521 1234788889998888888875321 12333344444
Q ss_pred HHHHHHhh----hCCCEeecCCeeEEEeeecCCCC-----CCC----HHHHHHHHHHhcCeEEEC
Q 013883 378 AILVEGLN----AVGFKVFPSSGTYFVVVDHTPFG-----HET----DIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 378 ~~l~~~L~----~~g~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~Ll~~~GV~v~p 429 (434)
+++.+.|+ +.++......-|.++-+.+.... ... ...++..+++ .||++.+
T Consensus 358 ~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~ 421 (461)
T PRK07482 358 AYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALE-RGVIARA 421 (461)
T ss_pred HHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHH-CCcEEec
Confidence 44444444 34433222233444444442111 011 2356666665 5999865
No 273
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.70 E-value=2e-15 Score=136.74 Aligned_cols=288 Identities=18% Similarity=0.202 Sum_probs=187.2
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCC
Q 013883 124 PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPF 203 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~ 203 (434)
...+++++.++.-. ..-|+...-...|.+.+|+.++ .|..+++++|....+..++..+-++|.+|++.+-.
T Consensus 35 TdeMr~am~eA~vg-DdVyGeD~tt~rLE~~vA~l~G--------KEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~ 105 (384)
T KOG1368|consen 35 TDEMRRAMAEASVG-DDVYGEDPTTNRLEQRVAELFG--------KEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRA 105 (384)
T ss_pred hHHHHHHHhhcccC-cccccCCccHHHHHHHHHHHhC--------ccceeeecccccccHHHHHHHhcCCCceEEeccch
Confidence 45666666665432 3345444445789999999887 33256777775555554444445699999998876
Q ss_pred chhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--------CCcEEEecCCCCCcc-cCCCHHHHHHHHHHH
Q 013883 204 YDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK--------NTRAILMNTPHNPTG-KMFTREELNVIASLC 271 (434)
Q Consensus 204 y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--------~~~~i~~~~p~NPTG-~~~~~e~l~~i~~la 271 (434)
+--.+. +....|+.++++...+ ++.+|++++|+++.. -+++|++.|-||-+| .++|.|++.+|.+||
T Consensus 106 HI~~~E~gg~s~l~gv~~~tv~~e~-dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~la 184 (384)
T KOG1368|consen 106 HIHRYEQGGISQLAGVHVRTVKNEN-DGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALA 184 (384)
T ss_pred heeehhccChhhhccceeEeeeeCC-CCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHH
Confidence 654322 3455677777776543 778999999999973 478999998877776 999999999999999
Q ss_pred HHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceee-eEEeChhhHHHHHHHhhccccCC--c
Q 013883 272 IENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIG-WAIAPPHLTWGVRQAHSFLTFAT--S 348 (434)
Q Consensus 272 ~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~~~~~~~~~~~l~~~~~~~~~~~--~ 348 (434)
++||+.+..|.+--+-+--....++..+....|.+-+ -+||.+|.| +| .++++++++++.+..+.....+. +
T Consensus 185 k~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsi--CLSKglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQs 259 (384)
T KOG1368|consen 185 KRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSI--CLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQS 259 (384)
T ss_pred hccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhh--hhhccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHH
Confidence 9999999999885432211122334433333332222 489999854 55 77789999988776665544443 4
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC-CEeecC--CeeEEEeeecCCCCCCCHHHHHHHHHHhcCe
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG-FKVFPS--SGTYFVVVDHTPFGHETDIAFCEYLIKEVGV 425 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV 425 (434)
....+|++.+|.+.. ..+ ..-.++...+.+.++..+ +++..+ +.++ +.+.+..... +.++++.++ ++.||
T Consensus 260 GvLaaaaLval~~~~---~~L-~~dHk~A~~lAe~~~~~~~i~v~v~a~etNi-v~~~l~q~~~-~~~~l~~~~-~k~gi 332 (384)
T KOG1368|consen 260 GVLAAAALVALDENV---PLL-RADHKRAKELAEYINTPEEIRVEVPAVETNI-VNMVLCQARL-TAEELCKFL-EKNGI 332 (384)
T ss_pred HHHHHHHHHHhhcch---HHH-HHHHHHHHHHHHHhccccceeeecchhhcce-eeeecccccC-CHHHHHHHH-HHCCe
Confidence 444555556666532 222 223445556666676664 665433 5554 4444433333 688898888 56799
Q ss_pred EEECCCCC
Q 013883 426 VAIPTSVF 433 (434)
Q Consensus 426 ~v~pG~~F 433 (434)
.+.+|..+
T Consensus 333 ~lm~~~s~ 340 (384)
T KOG1368|consen 333 LLMGGASR 340 (384)
T ss_pred EEeecccc
Confidence 99998654
No 274
>PRK06541 hypothetical protein; Provisional
Probab=99.70 E-value=6e-15 Score=149.36 Aligned_cols=309 Identities=16% Similarity=0.101 Sum_probs=188.6
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...||+..|. -.+. .+|.+.+++.+++.+..+....... .+.+..+++.+.+..... .+ .+++++++++|++
T Consensus 51 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~-~~~~~~la~~l~~~~p~~--~~-~v~f~~sGseAve 126 (460)
T PRK06541 51 GKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYA-HPPAIELAERLAALAPGD--LN-RVFFTTGGSEAVE 126 (460)
T ss_pred CCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccC-CHHHHHHHHHHHHhCCCC--cC-EEEEcCCcHHHHH
Confidence 34678887662 2222 3677888998888764221111112 244555666666543221 24 7999999999999
Q ss_pred HHHHHccC--------CCCeEEEcCCCchhHHHHHHHc-CC------------EEEEEEcCCC----CCCCC--------
Q 013883 185 ATILGLIN--------PGDEVILFAPFYDSYEATLSMA-GA------------KIKCITLRPP----DFAIP-------- 231 (434)
Q Consensus 185 ~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~----~~~~d-------- 231 (434)
.+++.... ...+|+...-.|++........ |. .+..+|.... .++-+
T Consensus 127 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (460)
T PRK06541 127 SAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWA 206 (460)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHH
Confidence 98875431 1367888888888865433221 11 1222332210 01112
Q ss_pred HHHHHhhcc---cCCcEEEecCC-CCCcccCCC-HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCce
Q 013883 232 IEELKSTIS---KNTRAILMNTP-HNPTGKMFT-REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERT 306 (434)
Q Consensus 232 ~~~l~~~i~---~~~~~i~~~~p-~NPTG~~~~-~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~ 306 (434)
++.+++.+. .+..+.++..| +++.|.+.+ .+.+++|.++|++||+++|+||+|.+|...|.......+.-.+|
T Consensus 207 ~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PD-- 284 (460)
T PRK06541 207 ADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPD-- 284 (460)
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCC--
Confidence 366777774 23445555556 899998765 88899999999999999999999988754444333322222233
Q ss_pred EEEccCChhhccccc-eeeeEEeChhhHHHHHHHh----hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 307 VTMNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQAH----SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 307 i~i~S~SK~~g~~G~-R~G~~~~~~~~~~~l~~~~----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+.+|+|.++ .|+ ++|++++++++.+.+.... ...+++.+++...++.+.|+..+ -+++.++++++.+++.
T Consensus 285 --ivt~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~--~~~~~~~~~~~g~~l~ 359 (460)
T PRK06541 285 --IITCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFE--REGLLDHVRDNEPAFR 359 (460)
T ss_pred --EEEeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHH
Confidence 336999999 898 9999999999987765321 12366777788888887777522 1235577777888888
Q ss_pred HHhhhC-CCE---eecCCeeEEEeeecCCC-----CCCCH-------HHHHHHHHHhcCeEEEC
Q 013883 382 EGLNAV-GFK---VFPSSGTYFVVVDHTPF-----GHETD-------IAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 382 ~~L~~~-g~~---~~~~~~~~~~~~~~~~~-----~~~~~-------~~~~~~Ll~~~GV~v~p 429 (434)
+.|+++ .+. .+...|.|+. +.+... ..... ..+...|++ +||++.|
T Consensus 360 ~~L~~l~~~~~v~~vrg~Gl~~~-ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~ 421 (460)
T PRK06541 360 ATLEKLLDLPIVGDVRGDGYFYG-IELVKDKATKETFTDDESERLLRGFLSPALFE-AGLYCRA 421 (460)
T ss_pred HHHHHhhcCCCeEEEEecceEEE-EEEecCcccccCCcchhhhhhHHHHHHHHHHh-CCeEEEe
Confidence 887765 222 2345555543 333110 01000 245566665 5999987
No 275
>PLN02271 serine hydroxymethyltransferase
Probab=99.70 E-value=1.4e-14 Score=145.10 Aligned_cols=271 Identities=13% Similarity=0.081 Sum_probs=182.0
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCCCCC--CCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH---------H
Q 013883 144 RGHGVPEFNSAIASRFKKDSGLEVDP--EKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL---------S 212 (434)
Q Consensus 144 ~~~G~~~lr~~ia~~l~~~~g~~~~~--~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---------~ 212 (434)
....+.++.....+...+.+|.+... - +|..-+| +.|+.+++.++++|||+|+..+..+.+|.... .
T Consensus 188 G~~~iD~iE~la~era~~lF~~~~~~~ga-NVQp~SG-s~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs 265 (586)
T PLN02271 188 GNQYIDQIERLCCERALAAFGLDSEKWGV-NVQPYSC-TSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVS 265 (586)
T ss_pred CChhHHHHHHHHHHHHHHHhCCccccccc-ceeeccH-HHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccc
Confidence 33344566666666666667644211 2 4656655 88888899999999999999888888765432 3
Q ss_pred HcCCEEEEEE--cCCCCCCCCHHHHHh-hcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCcccc
Q 013883 213 MAGAKIKCIT--LRPPDFAIPIEELKS-TISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 289 (434)
Q Consensus 213 ~~G~~~~~v~--~~~~~~~~d~~~l~~-~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~ 289 (434)
..|..+..++ ++++++.+|.|++++ +...++|+|++..-.|| ..+ ++++|.++|+++|+++++|.++.....
T Consensus 266 ~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~---D~~~i~eIAdevGA~LmvD~AH~aGLI 340 (586)
T PLN02271 266 GASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP--REW---DYARFRQIADKCGAVLMCDMAHISGLV 340 (586)
T ss_pred cccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc--CcC---CHHHHHHHHHHcCCEEEEECccccccc
Confidence 3565555555 555678999999998 66779999998777777 444 466788899999999999999976544
Q ss_pred CCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh--------------------hHHHHHHHhhccc-cCCc
Q 013883 290 EMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH--------------------LTWGVRQAHSFLT-FATS 348 (434)
Q Consensus 290 ~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~--------------------~~~~l~~~~~~~~-~~~~ 348 (434)
.++... ..+ ....++..|..|++ .|.|.|.+..+++ +.+++........ .++.
T Consensus 341 a~g~~~-sP~---~~aDvvt~TTHKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGph 414 (586)
T PLN02271 341 AAKECV-NPF---DYCDIVTSTTHKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPH 414 (586)
T ss_pred ccCcCC-CCC---cCCcEEEeCCcccC--CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChh
Confidence 332110 001 12348899999997 4788899888753 3333333222211 1222
Q ss_pred hHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecC-CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 349 TPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFPS-SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 349 ~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
.....+.+.++... ....++..++..++.+.|.+.|.+.|++++.. ..++.+++++.+.+. +-..+++++++.||.
T Consensus 415 n~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~--~G~~ae~~Le~~~I~ 492 (586)
T PLN02271 415 NNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGL--TGKNYEKVCEMCHIT 492 (586)
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCC--CHHHHHHHHHHcCeE
Confidence 22233334445531 22236778888999999999999999998743 356788999877664 336667788999998
Q ss_pred EEC
Q 013883 427 AIP 429 (434)
Q Consensus 427 v~p 429 (434)
+..
T Consensus 493 ~Nk 495 (586)
T PLN02271 493 LNK 495 (586)
T ss_pred ecc
Confidence 853
No 276
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.69 E-value=4.5e-15 Score=146.02 Aligned_cols=217 Identities=22% Similarity=0.283 Sum_probs=154.2
Q ss_pred CCCCCCCCc---HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH----
Q 013883 140 NQYARGHGV---PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS---- 212 (434)
Q Consensus 140 ~~Y~~~~G~---~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---- 212 (434)
..|... |. ..|.+.++++.+ .+ .++++++|..|+..++.+++++||.|++....|.+....++
T Consensus 47 ~~Y~R~-gnPt~~~le~~la~Le~--------g~-~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~ 116 (386)
T PF01053_consen 47 YIYSRY-GNPTVRALEQRLAALEG--------GE-DALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLP 116 (386)
T ss_dssp CSBTTT-C-HHHHHHHHHHHHHHT---------S-EEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHH
T ss_pred cceecc-ccccHHHHHHHHHHhhc--------cc-ceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhc
Confidence 455554 32 245555555543 24 68888999999999999999999999999999999776655
Q ss_pred HcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcC-cEEEEcCcCCccccCC
Q 013883 213 MAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEND-VLVFSDEVYDKLAFEM 291 (434)
Q Consensus 213 ~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~-~~iI~Deay~~~~~~~ 291 (434)
..|.++..++.. |++.+++++++++++|++.+|.||+..+. ++++|+++|+++| +++|+|+.+.....-
T Consensus 117 ~~gv~v~~~d~~------d~~~l~~~l~~~t~~v~~EspsNP~l~v~---Dl~~i~~~a~~~g~~~~vVDnT~atp~~~- 186 (386)
T PF01053_consen 117 RFGVEVTFVDPT------DLEALEAALRPNTKLVFLESPSNPTLEVP---DLEAIAKLAKEHGDILVVVDNTFATPYNQ- 186 (386)
T ss_dssp HTTSEEEEESTT------SHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC-
T ss_pred ccCcEEEEeCch------hHHHHHhhccccceEEEEEcCCCcccccc---cHHHHHHHHHHhCCceEEeeccccceeee-
Confidence 479999887544 79999999999999999999999998887 7888999999998 999999999653211
Q ss_pred CCccccCCCCCCCceEEEccCChhhc-cccceeeeEEeCh--hhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHH
Q 013883 292 DHISIASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIAPP--HLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEE 368 (434)
Q Consensus 292 ~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~~~--~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~ 368 (434)
..+ ..+-.+++.|.+|.++ ....=.|.++++. ++.+.++..........++...+.+..-|+. +.-
T Consensus 187 -----~pL--~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T----l~~ 255 (386)
T PF01053_consen 187 -----NPL--ELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRT----LPL 255 (386)
T ss_dssp ------GG--GGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT----HHH
T ss_pred -----ccC--cCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCc----HHH
Confidence 111 1234589999999985 2333378888764 7777777776655566666666666666665 344
Q ss_pred HHHHHHHHHHHHHHHhhhC
Q 013883 369 LKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~ 387 (434)
..++..++...+.+.|++.
T Consensus 256 R~~~~~~nA~~lA~~L~~h 274 (386)
T PF01053_consen 256 RMERQNENAEALAEFLEEH 274 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 4566677777888888875
No 277
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=3.3e-15 Score=147.26 Aligned_cols=208 Identities=14% Similarity=0.177 Sum_probs=151.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEEcCC
Q 013883 150 EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCITLRP 225 (434)
Q Consensus 150 ~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~ 225 (434)
.|.+.++++-+ .+ ..+++++++.|+..++.+++++||.|++.+..|.+....+ +..|+++..++..
T Consensus 66 ~le~~la~LEg--------~~-~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~- 135 (395)
T PRK08114 66 SLQEAMCELEG--------GA-GCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPL- 135 (395)
T ss_pred HHHHHHHHHhC--------CC-eEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCC-
Confidence 45555555432 33 5677777899999999999999999999999998766554 6689999887643
Q ss_pred CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc--CcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 226 PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN--DVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~--~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
|.+.+++++++++|+|++.+|.||+|.+. ++++|+++|+++ |+++|+|.++..... ..... .
T Consensus 136 -----d~~~l~~~l~~~TrlV~~EtpsNp~~~v~---DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~----~~pl~----~ 199 (395)
T PRK08114 136 -----IGADIAKLIQPNTKVVFLESPGSITMEVH---DVPAIVAAVRSVNPDAVIMIDNTWAAGVL----FKALD----F 199 (395)
T ss_pred -----CHHHHHHhcCCCceEEEEECCCCCCCEee---cHHHHHHHHHHhCCCCEEEEECCCccccc----cCHHH----c
Confidence 67899999999999999999999999998 577799999998 499999999965221 11111 2
Q ss_pred CceEEEccCChhhccc-cceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLT-GWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVE 382 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~-G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~ 382 (434)
+-.+++.|.+|.++-+ ..-.|.++.+++..+.++..........++...+.+..-|+. +.-..++..++...+.+
T Consensus 200 GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T----L~lR~~~~~~na~~va~ 275 (395)
T PRK08114 200 GIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLRT----LGVRLRQHEESSLKVAE 275 (395)
T ss_pred CCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHHHHH
Confidence 3458999999988533 357888888877766666555544445555555544444443 34445666777777888
Q ss_pred HhhhC
Q 013883 383 GLNAV 387 (434)
Q Consensus 383 ~L~~~ 387 (434)
.|++.
T Consensus 276 ~L~~h 280 (395)
T PRK08114 276 WLAEH 280 (395)
T ss_pred HHHcC
Confidence 88764
No 278
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=3.5e-15 Score=149.52 Aligned_cols=156 Identities=19% Similarity=0.218 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH----HHHcCCEEEEEEcC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LSMAGAKIKCITLR 224 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~~ 224 (434)
..|++.++++.+ .+ ..+++++++.|+..++.+++++||+|++....|.+.... +...|++++.++ +
T Consensus 72 ~~Le~~lA~l~g--------~~-~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d 141 (436)
T PRK07812 72 DVVEQRIAALEG--------GV-AALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D 141 (436)
T ss_pred HHHHHHHHHHhC--------CC-eEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C
Confidence 466677766654 23 466667778899999999999999999999888876543 344788877774 2
Q ss_pred CCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCC
Q 013883 225 PPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYE 304 (434)
Q Consensus 225 ~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~ 304 (434)
. .|++.+++++++++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|+++..... ...+ ..+
T Consensus 142 ~----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~------~~pl--~~G 206 (436)
T PRK07812 142 P----DDLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL------IRPL--EHG 206 (436)
T ss_pred C----CCHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc------CCch--hcC
Confidence 1 2899999999999999999999999999985 66788999999999999998764211 1111 123
Q ss_pred ceEEEccCChhhccccceeeeEEeC
Q 013883 305 RTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 305 ~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
-.+++.|++|.+|-.|--+|.++..
T Consensus 207 aDivv~S~tK~lgg~G~~i~G~vv~ 231 (436)
T PRK07812 207 ADIVVHSATKYLGGHGTAIAGVIVD 231 (436)
T ss_pred CCEEEEecccccCCCCCeEEEEEEc
Confidence 4477899999997565556666653
No 279
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.69 E-value=9.1e-15 Score=147.76 Aligned_cols=307 Identities=15% Similarity=0.114 Sum_probs=188.7
Q ss_pred cCCeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQG--FPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...+|+..| ...+. .+|.+.+++.+++..... +.. ....+.+..+++.+.+..... .+ .+++++++++|++
T Consensus 81 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~-~~~-~~~~~~~~~lae~L~~~~p~~--~~-~v~f~~SGsEAve 155 (459)
T PRK11522 81 GQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPL-HSQ-ELLDPLRAMLAKTLAALTPGK--LK-YSFFCNSGTESVE 155 (459)
T ss_pred CCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcc-ccc-ccCCHHHHHHHHHHHHhCCCC--CC-EEEEeCCchHHHH
Confidence 3456787666 22233 367788899988876422 111 122355666677666543221 23 7999999999999
Q ss_pred HHHHHcc----CCC-CeEEEcCCCchhHHHHHHHc-CCEEEE---EEcCCCC---CCCCHHHHHhhccc------CCcEE
Q 013883 185 ATILGLI----NPG-DEVILFAPFYDSYEATLSMA-GAKIKC---ITLRPPD---FAIPIEELKSTISK------NTRAI 246 (434)
Q Consensus 185 ~~~~~l~----~~g-d~Vlv~~p~y~~~~~~~~~~-G~~~~~---v~~~~~~---~~~d~~~l~~~i~~------~~~~i 246 (434)
.+++... ++| ..|+.....|++........ |-.... .|..+.- ...|.+.+++.+.. +..+|
T Consensus 156 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAav 235 (459)
T PRK11522 156 AALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAV 235 (459)
T ss_pred HHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEE
Confidence 9987553 123 46888888888865443332 211111 1111100 01267778877742 34556
Q ss_pred EecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc-ceee
Q 013883 247 LMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG-WKIG 324 (434)
Q Consensus 247 ~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G 324 (434)
++.....-.|.+ +|.+.++++.++|++||+++|+||++.+|...|..+....+.-.+| +.+++|.+| .| +.+|
T Consensus 236 IvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PD----ivt~gK~lg-gG~~Pig 310 (459)
T PRK11522 236 ILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPD----ILCLAKALG-GGVMPIG 310 (459)
T ss_pred EEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCC----EEEechhhh-CCCccce
Confidence 665556667775 4667799999999999999999999988765555444333332344 448899999 78 5899
Q ss_pred eEEeChhhHHHHHH--HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--CCE----eecCCe
Q 013883 325 WAIAPPHLTWGVRQ--AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV--GFK----VFPSSG 396 (434)
Q Consensus 325 ~~~~~~~~~~~l~~--~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~----~~~~~~ 396 (434)
.+++.+++.+.+.. .....+++.++.+.+++.+.|+.-++ +.+.++.+++-+++++.|+++ .+. -+...
T Consensus 311 av~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~- 387 (459)
T PRK11522 311 ATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLE--QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGK- 387 (459)
T ss_pred eEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEec-
Confidence 99999888776532 12335677788888888888875321 134555666666666666654 122 12333
Q ss_pred eEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 397 TYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
|.++-+.+... +....+...|++ +||.+.+.
T Consensus 388 Gl~~giel~~~--~~~~~i~~~l~~-~Gvl~~~~ 418 (459)
T PRK11522 388 GMLMAIEFVDN--EIGYNFASEMFR-QRVLVAGT 418 (459)
T ss_pred eeEEEEEecCc--hHHHHHHHHHHH-CCeEEEec
Confidence 44445554321 124567777766 59999764
No 280
>PRK02769 histidine decarboxylase; Provisional
Probab=99.69 E-value=3.3e-14 Score=140.28 Aligned_cols=243 Identities=15% Similarity=0.099 Sum_probs=171.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCc--EEEcCChHHHHHHHHHHc--cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKE--VTVTSGCTEAIAATILGL--INPGDEVILFAPFYDSYEATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~--i~~t~G~~~ai~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 223 (434)
..++.+.+.+++.+..|.+ ++ + -++|+|++|++..++... ..++++|++++-.|+.....++.+|.+.+.|+.
T Consensus 63 ~~~~e~~~~~~~a~l~g~~--~~-~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~ 139 (380)
T PRK02769 63 SFDFERDVMNFFAELFKIP--FN-ESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITS 139 (380)
T ss_pred hHHHHHHHHHHHHHHhCCC--CC-CCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceecc
Confidence 4567767777777777653 33 3 488999999987665443 357889999999999999999999999999998
Q ss_pred CCCCCCCCHHHHHhhcccC---CcEEEecCCCCCcccCCCHHHHHHHHHHHHHcC---cEEEEcCcCCccccCC-CCccc
Q 013883 224 RPPDFAIPIEELKSTISKN---TRAILMNTPHNPTGKMFTREELNVIASLCIEND---VLVFSDEVYDKLAFEM-DHISI 296 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~---~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~---~~iI~Deay~~~~~~~-~~~~~ 296 (434)
++ ++.+|++.|+++++++ +++|+++.++|+||.+.+ +++|+++|+++| +++++|.+|..+...- +....
T Consensus 140 ~~-~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~ 215 (380)
T PRK02769 140 LP-NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPP 215 (380)
T ss_pred CC-CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCcccc
Confidence 75 7789999999999876 888889999999999985 566888899998 7999999998854310 00001
Q ss_pred cCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhc-------cccCCchHHHHHHHHHHhC-ChHHHHH
Q 013883 297 ASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSF-------LTFATSTPMQWAATAALRA-PETYYEE 368 (434)
Q Consensus 297 ~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~-------~~~~~~~~~q~a~~~~L~~-~~~~~~~ 368 (434)
..+. .+-..+..|..|.++ .-..+|+++.+++..+.+.....+ ...+.+.....++..+|+. ..+.+++
T Consensus 216 ~d~~--~~vDsis~s~HK~~~-~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~ 292 (380)
T PRK02769 216 FSFA--DGIDSIAISGHKFIG-SPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQ 292 (380)
T ss_pred CCcc--CCCCEEEECCcccCC-CCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHH
Confidence 1111 133466788999877 334589999988766554211111 0112233344444455554 3456788
Q ss_pred HHHHHHHHHHHHHHHhhhCCCEeec-CCeeEEE
Q 013883 369 LKRDYSAKKAILVEGLNAVGFKVFP-SSGTYFV 400 (434)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~ 400 (434)
..++..+..+++.+.|++.|+++.. |.....+
T Consensus 293 ~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~ 325 (380)
T PRK02769 293 RVQHCLDMAQYAVDRLQANGIPAWRNPNSITVV 325 (380)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEE
Confidence 8888999999999999988888654 4444333
No 281
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.68 E-value=1.3e-14 Score=145.94 Aligned_cols=305 Identities=20% Similarity=0.163 Sum_probs=182.6
Q ss_pred cCCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...||+..|+-. +. .+|.+.+++.+++.+......+ .+.+..+++.+.+... ..+ .+++++++++|++
T Consensus 52 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~----~~~~~~la~~l~~~~p---~~~-~v~f~~sGseA~e 123 (428)
T PRK12389 52 GNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTP----TELEIEFAKMLKEAIP---SLE-KVRFVNSGTEAVM 123 (428)
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCC----CHHHHHHHHHHHHhCC---CCc-EEEEeCCHHHHHH
Confidence 3357888666322 22 3677888999988764332211 2345556666654432 134 7999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHH-cCCEEEEE--E----cC---CCC----CCCCHHHHHhhccc---CCcE
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSM-AGAKIKCI--T----LR---PPD----FAIPIEELKSTISK---NTRA 245 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~G~~~~~v--~----~~---~~~----~~~d~~~l~~~i~~---~~~~ 245 (434)
.+++... ....+|+...-.|++....... .|...... | .. .++ ...|++.+++.+.. +..+
T Consensus 124 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaa 203 (428)
T PRK12389 124 TTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAA 203 (428)
T ss_pred HHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEE
Confidence 9987553 2346788888888886544332 22111100 0 00 001 01268888888853 4556
Q ss_pred EEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceee
Q 013883 246 ILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIG 324 (434)
Q Consensus 246 i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G 324 (434)
|++.......|.+. +.+.+++|.++|++||+++|+||++.+| ..+.......+.-.+| +.+++|.+| .|+.+|
T Consensus 204 vi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PD----ivt~gK~lg-gG~Pi~ 277 (428)
T PRK12389 204 VLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPD----LTALGKIIG-GGLPIG 277 (428)
T ss_pred EEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCC----eeeechhhc-CCCcee
Confidence 66665566678755 6777999999999999999999999988 3322111111222233 458999998 899999
Q ss_pred eEEeChhhHHHHHH---HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh----CCCEee-cCCe
Q 013883 325 WAIAPPHLTWGVRQ---AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA----VGFKVF-PSSG 396 (434)
Q Consensus 325 ~~~~~~~~~~~l~~---~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~ 396 (434)
.+++++++.+.+.. .....+++.+++..+++.+.|+..++ +++.++.+++-+++++.|++ .++... ...+
T Consensus 278 av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~ 355 (428)
T PRK12389 278 AYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ--EGVYEKLDRLGAMLEEGILEAAEKHGITITINRLK 355 (428)
T ss_pred EEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 99999999887742 11234678888888888888875311 12334444455555554443 453222 1223
Q ss_pred eEEEeeecCCCCC---------C--CHHHHHHHHHHhcCeEEECC
Q 013883 397 TYFVVVDHTPFGH---------E--TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 397 ~~~~~~~~~~~~~---------~--~~~~~~~~Ll~~~GV~v~pG 430 (434)
+++. +.+..... + ....+...+++ +||++.|.
T Consensus 356 g~~g-i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~ 398 (428)
T PRK12389 356 GALT-VYFTDEKVTNYDQAERSDGEAFGKFFKLMLN-QGINLAPS 398 (428)
T ss_pred cEEE-EEEeCCCCCChhhhcccCHHHHHHHHHHHHH-CCcEeecC
Confidence 3432 22211100 0 12356666665 59999875
No 282
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=1.3e-14 Score=137.05 Aligned_cols=300 Identities=19% Similarity=0.166 Sum_probs=202.0
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC-------CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG-------KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
..|+|=..++- ..+.+.++.-..+.+. .-.|...+-+.++.+...++.++.+|.+.. ++.-.+| +.|
T Consensus 27 ~~ieLIASEN~--~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~a---nVQPhSG-s~A 100 (413)
T COG0112 27 EHIELIASENF--TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYA---NVQPHSG-SQA 100 (413)
T ss_pred hceeeeecccc--CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCcc---ccCCCCc-hHH
Confidence 45555333221 2455666655555431 123444444566777777777777776532 5666677 777
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcC--CEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcc
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEAT---LSMAG--AKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTG 256 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G--~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG 256 (434)
..+++.++++|||+|+-.+-.+.+|... +...| .+++.++++.+++.+|.|++++...+ ++|+|+.-.-..|-
T Consensus 101 N~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY~r- 179 (413)
T COG0112 101 NQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAYSR- 179 (413)
T ss_pred HHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECcccccc-
Confidence 7889999999999999988887776543 22233 36677777878899999999998876 78888864333332
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCC-ccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeCh-hhHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYD-KLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP-HLTW 334 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~-~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~-~~~~ 334 (434)
.. +++++.++|.+.|.++++|.+|. ++.-+|.++.... .-.++..|-.|+| .|.|.|.+.++. ++..
T Consensus 180 -~i---d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~-----~AdvVTtTTHKTl--rGPrGG~Il~~~eel~k 248 (413)
T COG0112 180 -PI---DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP-----HADVVTTTTHKTL--RGPRGGIILTNDEELAK 248 (413)
T ss_pred -cc---CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC-----ccceEeCCcccCC--CCCCceEEEeccHHHHH
Confidence 22 58889999999999999999985 4444554443222 2348899999997 699999999985 7777
Q ss_pred HHHHHhhccccCCchHHHHHH-HHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecC-CeeEEEeeecCCCCCCC
Q 013883 335 GVRQAHSFLTFATSTPMQWAA-TAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPS-SGTYFVVVDHTPFGHET 411 (434)
Q Consensus 335 ~l~~~~~~~~~~~~~~~q~a~-~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~ 411 (434)
++.+.-.....+.+.+.-.|+ +.++.. .+..+++...+..++.+.|.+.|.+.|++++.. .-+..+.+++.+.+.
T Consensus 249 kin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~-- 326 (413)
T COG0112 249 KINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGL-- 326 (413)
T ss_pred HhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccceEEEEEcccCCC--
Confidence 777655444444444432222 223332 222356677788889999999999999998753 345677888874433
Q ss_pred HHHHHHHHHHhcCeEEEC
Q 013883 412 DIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~p 429 (434)
+-..+++++++.||.+.-
T Consensus 327 ~Gk~ae~~L~~~~It~NK 344 (413)
T COG0112 327 TGKKAEAALERAGITVNK 344 (413)
T ss_pred CHHHHHHHHHHcCEeecc
Confidence 335667777899998753
No 283
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.68 E-value=4.4e-15 Score=139.44 Aligned_cols=288 Identities=16% Similarity=0.137 Sum_probs=182.4
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcC
Q 013883 122 DGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFA 201 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~ 201 (434)
.+.|.+++++.++-..+...|+. .+..+++.+++.+..|. + .++++.++|++..+++.+.++||+.|++..
T Consensus 11 g~~~~m~eam~~a~~~~~~~YG~----D~~~~~~e~~~ae~~g~----~-a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~ 81 (342)
T COG2008 11 GPTPEMREALAAANAVGDDVYGE----DPTTNALEQRIAELFGK----E-AALFVPSGTQANQLALAAHCQPGESVICHE 81 (342)
T ss_pred CCCHHHHHHHHhccccCCCCCCC----CHHHHHHHHHHHHHhCC----c-eEEEecCccHHHHHHHHHhcCCCCeEEEec
Confidence 45677888777664333444554 44555555555544443 4 688888889999999999999999999987
Q ss_pred CCchhHHH--HHHHcCCEEEEEEcCC-CCCCCCHHHHHhhccc------CCcEEEecCCCCCcccCCCHHHHHHHHHHHH
Q 013883 202 PFYDSYEA--TLSMAGAKIKCITLRP-PDFAIPIEELKSTISK------NTRAILMNTPHNPTGKMFTREELNVIASLCI 272 (434)
Q Consensus 202 p~y~~~~~--~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~ 272 (434)
-.|-.... ..+.++ .+..++..+ +++.+++|.+++.+.+ .+..+++.+.+|..|.++|.+++++|.++|+
T Consensus 82 ~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k 160 (342)
T COG2008 82 TAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCK 160 (342)
T ss_pred cccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHH
Confidence 76654332 234444 222334443 5789999999998864 3456666666668899999999999999999
Q ss_pred HcCcEEEEcCcCCc--cccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc--cCCc
Q 013883 273 ENDVLVFSDEVYDK--LAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT--FATS 348 (434)
Q Consensus 273 ~~~~~iI~Deay~~--~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~--~~~~ 348 (434)
+||+.|..|.+--. +...+ ++...+.. .-.++...+||+.+.++ -..++++.+++++.+..+.... +.-.
T Consensus 161 ~~~l~LHmDGAR~~nA~valg--~~~~~~~~--~~D~v~~~~tK~g~~~~--gAiv~gn~~~~~~a~~~rK~~Ggl~~k~ 234 (342)
T COG2008 161 EHGLPLHMDGARLANALVALG--VALKTIKS--YVDSVSFCLTKGGGAPV--GAIVFGNRDFAKRARRWRKRAGGLMRKA 234 (342)
T ss_pred HhCCceeechHHHHHHHHHcC--CCHHHHHh--hCCEEEEecccCCccee--eeEEEcCHHHHHHHHHHHHHhcccHhhh
Confidence 99999999997432 11111 23333322 12245567899987665 3466678999888766554332 2334
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh-CCCEeecC-CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA-VGFKVFPS-SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
.+...+...+|++.- |+.. .+.-.++...|.+.|++ .|+++..+ +.+ .+|++++.... +...+...+ ...|+.
T Consensus 235 r~laA~~~~~l~~~~-~~~~-~~Han~mA~~La~~~~~~~G~~~~~~~~tN-~vf~~l~~~~i-~~l~~~~~~-~~~~~~ 309 (342)
T COG2008 235 RFLAAQGLYALEDDV-WRLA-ADHANAMAARLAEGLEAKPGVKLAFPVETN-MVFVRLPESAI-EALRLAGAL-FYRGVL 309 (342)
T ss_pred hHHHHHHHHHHhccH-HHHH-HHHHHHHHHHHHHhhhhcCCceeccCCccc-EEEEECChHHH-HHHHhhchh-heeeee
Confidence 444555566677632 3222 23334557888888985 59988764 666 45676643211 122222222 334666
Q ss_pred EECC
Q 013883 427 AIPT 430 (434)
Q Consensus 427 v~pG 430 (434)
+.++
T Consensus 310 ~~~~ 313 (342)
T COG2008 310 IGAH 313 (342)
T ss_pred ccCC
Confidence 6654
No 284
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.68 E-value=4e-15 Score=145.29 Aligned_cols=264 Identities=19% Similarity=0.168 Sum_probs=169.2
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCC-C--cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH-----H-----HHc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPE-K--EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT-----L-----SMA 214 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~-~--~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~-----~-----~~~ 214 (434)
+.++.+...+...+.++.+ ++ + ++-. .+++.|...++.++++|||+|+..++...+|... . ...
T Consensus 64 id~iE~la~~ra~~lF~~~--~~~w~anvqp-~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~ 140 (399)
T PF00464_consen 64 IDEIEELAIERAKELFGAE--PKEWYANVQP-HSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGL 140 (399)
T ss_dssp HHHHHHHHHHHHHHHHT-S--TTTEEEE----SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHH
T ss_pred hhHHHHHHHHHHHHHhCCC--cccceEEeec-CCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccc
Confidence 4456666666677677754 22 1 2333 4557889999999999999999999888776421 1 224
Q ss_pred CCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCC-ccccCCC
Q 013883 215 GAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYD-KLAFEMD 292 (434)
Q Consensus 215 G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~-~~~~~~~ 292 (434)
..+.+.|+++++++.+|.|++++.+.. ++|+|++..-..|- .-+++++.++|++.|.++++|-++. ++.-+|.
T Consensus 141 ~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~ 215 (399)
T PF00464_consen 141 YFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGL 215 (399)
T ss_dssp HSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTS
T ss_pred eEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehhe
Confidence 457888999988899999999998876 89999885444442 2267889999999999999999986 4444443
Q ss_pred CccccCCCCCCCceEEEccCChhhccccceeeeEEeC--------------hhhHHHHHHHhhccccCCchHHHHH-HHH
Q 013883 293 HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP--------------PHLTWGVRQAHSFLTFATSTPMQWA-ATA 357 (434)
Q Consensus 293 ~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~--------------~~~~~~l~~~~~~~~~~~~~~~q~a-~~~ 357 (434)
.++.... -.++.+|..|+| +|.|.|.+.++ +++.+.+.........+.+.....+ .+.
T Consensus 216 ~~~P~~~-----ADvvt~sThKtl--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAv 288 (399)
T PF00464_consen 216 FPNPFPY-----ADVVTGSTHKTL--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAV 288 (399)
T ss_dssp S--GCCT-----SSEEEEESSGGG---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHH
T ss_pred ecCcccc-----ceEEEeeccccc--cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHH
Confidence 3333222 238899999998 69999999999 7777777766544443444443333 334
Q ss_pred HHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeec-CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 358 ALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFP-SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 358 ~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
+|.. .....++..++..++.+.|.+.|.+.|+++.. ...++.+|+++.+.+. +. ..+++.+++.||.+.
T Consensus 289 al~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~-~g-~~a~~~Le~~gI~vn 359 (399)
T PF00464_consen 289 ALKEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGGTDNHQVLVDLRSFGI-DG-KEAEKALEEAGIIVN 359 (399)
T ss_dssp HHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS--H-HHHHHHHHHTTEE-E
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECCCCCCeEEEEeccccc-ch-HHHHHHHHhcCeeec
Confidence 4443 23345677888899999999999999999974 3346678899876654 33 445666788999885
No 285
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.67 E-value=4.9e-15 Score=142.57 Aligned_cols=200 Identities=20% Similarity=0.231 Sum_probs=153.5
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc----CCCC-CCC--CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD----GKNQ-YAR--GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~----~~~~-Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.+.|..+.- -+-++.|.+++.+.+.+ .... |.. -.++.+.|+.+|++++ .++. +|++|+|+|++
T Consensus 43 ~~vyld~~at-~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklIn------Ad~~-dIiFts~ATEs 114 (428)
T KOG1549|consen 43 RPVYLDNQAT-GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLIN------ADPS-DIVFTSGATES 114 (428)
T ss_pred ccEEEecCcC-CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhC------CCCC-cEEEeCCchHH
Confidence 5566655532 23466777777776654 2222 222 2236678999999998 7788 69999999999
Q ss_pred HHHHHHHcc-CCCC----eEEEcCCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCC
Q 013883 183 IAATILGLI-NPGD----EVILFAPFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNP 254 (434)
Q Consensus 183 i~~~~~~l~-~~gd----~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NP 254 (434)
+.++++.+. ..+| .|++.+-.|+.... .++.-|++++.+|.. .++..|++.++++|+++|+++.+-..+|.
T Consensus 115 ~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~ 193 (428)
T KOG1549|consen 115 NNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE-DSGLVDISKLREAIRSKTRLVSIMHVNNE 193 (428)
T ss_pred HHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC-ccccccHHHHHHhcCCCceEEEEEecccC
Confidence 999999874 4555 78887777777544 456679999999998 57889999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeCh
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP 330 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~ 330 (434)
+|+.+| +++|+++|+++++++++|.+++-. .-...+..+. -.++..|..|.+|.+| +|++++++
T Consensus 194 ~gv~~P---v~EI~~icr~~~v~v~~DaAQavG---~i~vDV~eln----~D~~s~s~HK~ygp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 194 IGVLQP---VKEIVKICREEGVQVHVDAAQAVG---KIPVDVQELN----ADFLSISAHKIYGPPG--IGALYVRR 257 (428)
T ss_pred cccccc---HHHHHHHhCcCCcEEEeehhhhcC---CccccHHHcC----chheeeecccccCCCc--ceEEEEcc
Confidence 999996 566899999999999999999752 1233334332 2367788999999888 99999986
No 286
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.67 E-value=4.2e-14 Score=141.41 Aligned_cols=294 Identities=13% Similarity=0.098 Sum_probs=190.5
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEE--EcCChHHHHHHHHHHcc--------
Q 013883 122 DGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVT--VTSGCTEAIAATILGLI-------- 191 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~--~t~G~~~ai~~~~~~l~-------- 191 (434)
++.+.+.+.+...+......+.......++.+.+.+++.+..|.+-..+ ++. +|+|++|++..++.+..
T Consensus 52 ~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~-~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDA-EAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCC-CCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 3455677777777764322222222335778888888887777631113 344 48999999988875542
Q ss_pred CCC-----CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 192 NPG-----DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 192 ~~g-----d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
..| ..|++..-.|......++.+|++++.+|.++.++.+|++.|++++++++.+|++...+|.||.+.| +++
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idp---i~~ 207 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYED---VKA 207 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCC---HHH
Confidence 112 368888999999999999999999999998644689999999999999999999999999999986 556
Q ss_pred HHHHHHHc------CcEEEEcCcCCccc----cCCCCccccCCCCCCCceEEEccCChhh-ccccceeeeEEeChh--hH
Q 013883 267 IASLCIEN------DVLVFSDEVYDKLA----FEMDHISIASLPGMYERTVTMNSLGKTF-SLTGWKIGWAIAPPH--LT 333 (434)
Q Consensus 267 i~~la~~~------~~~iI~Deay~~~~----~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~~~~~~~--~~ 333 (434)
|+++|+++ |+++.+|.+|.++. .+.....+. ...-..+..|..|.+ +..| +|+++.+++ +.
T Consensus 208 I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~----~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~ 281 (431)
T TIGR01788 208 LNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR----LPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALP 281 (431)
T ss_pred HHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC----CCCceEEEECchhccCCCCC--cEEEEEeChHHcc
Confidence 88889999 99999999999654 221111111 122334677889976 5444 898888654 22
Q ss_pred HHHHHHhhcc-------ccCCchHHHHHH--HHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecC--CeeEEE
Q 013883 334 WGVRQAHSFL-------TFATSTPMQWAA--TAALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFKVFPS--SGTYFV 400 (434)
Q Consensus 334 ~~l~~~~~~~-------~~~~~~~~q~a~--~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~ 400 (434)
+.+.....+. +...+..+..++ ...|.. ..+.+++..++..++.+++.+.|++. +++++.+ ..+...
T Consensus 282 ~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~ 361 (431)
T TIGR01788 282 EELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVA 361 (431)
T ss_pred hhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEE
Confidence 2221100011 111122221111 122222 34567778888889999999999987 5887754 455444
Q ss_pred eeecCCCC--CCCHHHHHHHHHHhcCeEE
Q 013883 401 VVDHTPFG--HETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 401 ~~~~~~~~--~~~~~~~~~~Ll~~~GV~v 427 (434)
+.+.+.+ ..+..++.++|.+ .|+.+
T Consensus 362 -Fr~~~~~~~~~~~~~l~~~L~~-~G~~~ 388 (431)
T TIGR01788 362 -FKLKDDADPGYTLYDLSHRLRE-RGWIV 388 (431)
T ss_pred -EEeCCCCCCCcCHHHHHHHHHH-CCCcc
Confidence 3443211 1245678887754 59863
No 287
>PRK05965 hypothetical protein; Provisional
Probab=99.67 E-value=1.7e-14 Score=146.21 Aligned_cols=309 Identities=14% Similarity=0.147 Sum_probs=185.5
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...||+..|.- .+. .+|.+.+++.+++.+..+......-..+.+..+++.+.+.... +.+ .+++++++++|++.
T Consensus 46 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~--~~~-~v~f~~sGSEAve~ 122 (459)
T PRK05965 46 HQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPG--SLN-HVYFTLGGSDAVDS 122 (459)
T ss_pred CEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCC--CcC-EEEEeCChhHHHHH
Confidence 35788866622 121 3678889999988764321110001124445566666654321 234 79999999999999
Q ss_pred HHHHccC-------C-CCeEEEcCCCchhHHHHH-HHcCC------------EEEEEEcCC--C-CCCCC--------HH
Q 013883 186 TILGLIN-------P-GDEVILFAPFYDSYEATL-SMAGA------------KIKCITLRP--P-DFAIP--------IE 233 (434)
Q Consensus 186 ~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~-~~~G~------------~~~~v~~~~--~-~~~~d--------~~ 233 (434)
+++.... + ..+|+.....|++..... ...|. .+..++... . .+.-| ++
T Consensus 123 AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (459)
T PRK05965 123 AVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVA 202 (459)
T ss_pred HHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHH
Confidence 9876431 2 357888888888864322 11111 112222211 0 01123 25
Q ss_pred HHHhhcc----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEE
Q 013883 234 ELKSTIS----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVT 308 (434)
Q Consensus 234 ~l~~~i~----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~ 308 (434)
.+++.+. ++..+|++...+...|++ ++.+.+++|.++|++||+++|.||++.+|...|.......+.-.+|
T Consensus 203 ~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PD---- 278 (459)
T PRK05965 203 ALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPD---- 278 (459)
T ss_pred HHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCC----
Confidence 6777664 245666666556667774 5777799999999999999999999999976665554444433444
Q ss_pred EccCChhhccccc-eeeeEEeChhhHHHHHH-------HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 309 MNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQ-------AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 309 i~S~SK~~g~~G~-R~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
+-+++|.++ .|+ .+|.+++++++.+.+.. .....+++.++.+.+++.+.|+..++ +++.++.+++-++|
T Consensus 279 iv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~g~~l 355 (459)
T PRK05965 279 LMTVAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHE--GGLLANGQKAGPRF 355 (459)
T ss_pred eEEechhhc-cCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHH
Confidence 566899999 895 99999999999877642 12335788888888888888874321 12334445555555
Q ss_pred HHHhhhC---CCE-eecCCeeEEEeeecCCC-----CCC----CHHHHHHHHHHhcCeEEEC
Q 013883 381 VEGLNAV---GFK-VFPSSGTYFVVVDHTPF-----GHE----TDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 381 ~~~L~~~---g~~-~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~Ll~~~GV~v~p 429 (434)
.+.|+++ ++- -+...|. ++-+.+... ... ....+...+++ .||++.+
T Consensus 356 ~~~l~~l~~~~~v~~vrG~Gl-~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gll~~~ 415 (459)
T PRK05965 356 AAGLDALRAHPLVGDVRGRGL-LGALELVADKATKTPFDAALDPADRIFDRAYA-NGLVFRA 415 (459)
T ss_pred HHHHHhhccCCCEEEEeecce-EEEEEEeccccccCCCCchhHHHHHHHHHHHh-CCeEEEe
Confidence 5555543 221 1233333 444443211 000 12345556655 5999987
No 288
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=4.3e-14 Score=142.59 Aligned_cols=310 Identities=15% Similarity=0.080 Sum_probs=185.1
Q ss_pred cCCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...||+..|.- .+. .+|.+.+++.+++.+..+....... .+....+++.+.+..+.. ..+ .+++++++++|++
T Consensus 53 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~-~~~~~~lAe~L~~~~p~~-~~~-~v~f~~SGsEA~e 129 (441)
T PRK05769 53 GNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFY-YEPAVELAERLVEIAPGG-FEK-KVFFTNSGTESNE 129 (441)
T ss_pred CCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccC-CHHHHHHHHHHHHhCCCC-CCC-EEEECCchHHHHH
Confidence 345788876632 222 3677888999988764322221111 244566777776543211 124 7999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHHc-CC-------------EEEEEEcCCC-C--CC-C--------CHHHHH
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSMA-GA-------------KIKCITLRPP-D--FA-I--------PIEELK 236 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~-~--~~-~--------d~~~l~ 236 (434)
.+++... ...++|+...-.|++........ |. .+..++.... . ++ - +++.++
T Consensus 130 ~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 209 (441)
T PRK05769 130 AAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIE 209 (441)
T ss_pred HHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHH
Confidence 9987542 23467888888888866543322 21 1223333210 0 01 0 123455
Q ss_pred h-hcc-----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEE
Q 013883 237 S-TIS-----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTM 309 (434)
Q Consensus 237 ~-~i~-----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i 309 (434)
+ .++ ++..+|++.......|.. ++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+| +
T Consensus 210 ~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pD----i 285 (441)
T PRK05769 210 DYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPD----I 285 (441)
T ss_pred HHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCC----E
Confidence 5 221 245556665446666774 4677799999999999999999999998766654433333322233 2
Q ss_pred ccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--
Q 013883 310 NSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-- 387 (434)
Q Consensus 310 ~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 387 (434)
.+|+|.+| .|+++|++++++++.+.... ....+++.+++.+.++.++|+..++ ++.++.+++-++|++.|+++
T Consensus 286 vt~~K~l~-~G~p~gav~~~~~i~~~~~~-~~~~T~~g~p~~~aaa~a~L~~l~~---~~~~~~~~~g~~l~~~L~~l~~ 360 (441)
T PRK05769 286 ITLAKAIA-GGLPLGAVIGRAELMFLPPG-SHANTFGGNPVAAAAALATLEELEE---GLLENAQKLGEYLRKELKELKE 360 (441)
T ss_pred EEEccccc-CCcccEEEEEehhhhhcCCC-CCCCCCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 35899999 89999999999888753321 2334677788888888888875332 45566666667777766553
Q ss_pred --CCEeecCCeeEEEeeecCCCCC----CCHHHHHHHHHHhcCeEEECC
Q 013883 388 --GFKVFPSSGTYFVVVDHTPFGH----ETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 388 --g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Ll~~~GV~v~pG 430 (434)
++......-|.++-+.+..... .....+.+.+++ .||++.|.
T Consensus 361 ~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~Gil~~~~ 408 (441)
T PRK05769 361 KYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFK-RGLLLLGA 408 (441)
T ss_pred hCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHh-CCcEEecC
Confidence 3322222223344444322110 012345666655 59999874
No 289
>PRK07046 aminotransferase; Validated
Probab=99.67 E-value=5e-14 Score=142.27 Aligned_cols=299 Identities=15% Similarity=0.128 Sum_probs=182.0
Q ss_pred cCCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|+-. +. .+|.+.+++.+++.++.....+ .+...++++.+.+..+ .+ .+.++++++||..
T Consensus 74 G~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~----~~~~~~lAe~l~~~~~----~~-~v~F~nSGtEA~e 144 (453)
T PRK07046 74 GHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLP----SEDAAWVGEELARRFG----LP-YWQVATTATDANR 144 (453)
T ss_pred CCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCC----CHHHHHHHHHHHHHhC----CC-EEEEECCHHHHHH
Confidence 3467888766422 22 3678999999998875432112 2455556666665542 34 7999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHH--cCCE-----------------EEEEEcCCCCCCCCHHHHHhhccc-C
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSM--AGAK-----------------IKCITLRPPDFAIPIEELKSTISK-N 242 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~--~G~~-----------------~~~v~~~~~~~~~d~~~l~~~i~~-~ 242 (434)
.+++... ...++|+...-.|+++.+.... .+.+ +..+| + -|++.+++.+.. +
T Consensus 145 ~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~-nd~~~l~~~l~~~~ 218 (453)
T PRK07046 145 FVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE-----F-NDLAALEAALADGD 218 (453)
T ss_pred HHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC-----C-CCHHHHHHHhCCCC
Confidence 9887653 3347788888889887433211 1110 11111 1 278999998854 4
Q ss_pred CcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccc
Q 013883 243 TRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGW 321 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~ 321 (434)
..+|++.......|.+ ++.+.+++|.++|++||+++|+||++. |..+-.. ....+.-.+| +.+++|.+| .|+
T Consensus 219 vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg-~~~~~gv~PD----i~t~gK~lg-gG~ 291 (453)
T PRK07046 219 VAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGG-YTRAHGLEPD----FLVVGKPIA-GGV 291 (453)
T ss_pred eEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcc-hhHHhCCCcc----ceeehhhhc-CCC
Confidence 5566665444445654 456679999999999999999999987 4322111 1111111233 456899999 899
Q ss_pred eeeeEEeChhhHHHHHHH---------hhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCE
Q 013883 322 KIGWAIAPPHLTWGVRQA---------HSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFK 390 (434)
Q Consensus 322 R~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 390 (434)
.+|.+++++++.+.+... ....+++.++....++.+.|+.. ++.++++.+.-...++.|.+.+.+.++.
T Consensus 292 Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~ 371 (453)
T PRK07046 292 PCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLP 371 (453)
T ss_pred cceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999998877532 12236778888888888887642 2344444444444455555555555544
Q ss_pred e-ecCCeeEEEeeecCCCCCC---------C---HHHHHHHHHHhcCeEEECC
Q 013883 391 V-FPSSGTYFVVVDHTPFGHE---------T---DIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 391 ~-~~~~~~~~~~~~~~~~~~~---------~---~~~~~~~Ll~~~GV~v~pG 430 (434)
+ +...|.++. +.+.+.... + ...+...+++ +||++.|.
T Consensus 372 ~~v~g~G~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~ 422 (453)
T PRK07046 372 WHVTRVGARVE-FQFAPTPPRNGAEAAAALDPELEAALHLYLLN-RGVLITPF 422 (453)
T ss_pred eEEEEeCcEEE-EEEeCCCCCCHHHHhcccCHHHHHHHHHHHHH-CCCEEecc
Confidence 3 233344432 221111000 1 1245556665 49999874
No 290
>PRK07678 aminotransferase; Validated
Probab=99.66 E-value=2.5e-14 Score=144.66 Aligned_cols=308 Identities=12% Similarity=0.093 Sum_probs=182.8
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|. ..+. .+|.+.+++.+++.+..+ +..... .+....+++.+.+..+. .+ .+++++++++|++
T Consensus 46 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~-~~~~~~lae~l~~~~~~---~~-~v~f~~sGseA~e 119 (451)
T PRK07678 46 GNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSY-FPLTQS-HEPAIKLAEKLNEWLGG---EY-VIFFSNSGSEANE 119 (451)
T ss_pred CCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCc-cccccC-CHHHHHHHHHHHHhCCC---CC-EEEEeCCcHHHHH
Confidence 34578886662 2222 367788888888876422 111122 23445566666654432 24 7999999999999
Q ss_pred HHHHHccC-------CC-CeEEEcCCCchhHHHHHHHc-CC------------EEEEEEcCCCCCC---------CC---
Q 013883 185 ATILGLIN-------PG-DEVILFAPFYDSYEATLSMA-GA------------KIKCITLRPPDFA---------IP--- 231 (434)
Q Consensus 185 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~~~---------~d--- 231 (434)
.+++.... +| .+|+.....|++........ |. .+..+|..+ .+. .|
T Consensus 120 ~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 198 (451)
T PRK07678 120 TAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPD-CYRMPGIESEDIYDLEC 198 (451)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCc-cccccccCChHHHHHHH
Confidence 98876531 23 57888888888865443322 21 122222211 111 01
Q ss_pred HHHHHhhcc----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCce
Q 013883 232 IEELKSTIS----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERT 306 (434)
Q Consensus 232 ~~~l~~~i~----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~ 306 (434)
++.+++.+. ++..+|++...+.-.|.+ ++++.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 199 ~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PD-- 276 (451)
T PRK07678 199 VKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPD-- 276 (451)
T ss_pred HHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCC--
Confidence 223555553 345666665545556775 5677799999999999999999999999866654434433333344
Q ss_pred EEEccCChhhcccc-ceeeeEEeChhhHHHHHHH------hhccccCCchHHHHHHHHHHhCCh--HHHHHHHHHHHHHH
Q 013883 307 VTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQA------HSFLTFATSTPMQWAATAALRAPE--TYYEELKRDYSAKK 377 (434)
Q Consensus 307 i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~a~~~~L~~~~--~~~~~~~~~~~~~~ 377 (434)
+-+++|.+| .| +.+|.+++++++.+.+... ....+++.++.+.+++.+.|+..+ +.++++++.-...+
T Consensus 277 --ivt~gK~lg-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~ 353 (451)
T PRK07678 277 --IITMAKGIT-SAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLL 353 (451)
T ss_pred --EEEeecccc-cCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 557899998 77 6999999999998777531 234578888998888888887532 22333333333333
Q ss_pred HHHHHHhhhCCCEe-ecCCeeEEEeeecCC-C------CCCCHHHHHHHHHHhcCeEEEC
Q 013883 378 AILVEGLNAVGFKV-FPSSGTYFVVVDHTP-F------GHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 378 ~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~-~------~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
+.|.+.+++.++.. +...|.|+ -+.+.. . +......++..+++ .||++.+
T Consensus 354 ~~l~~~~~~~~~v~~vrg~Gl~~-~i~~~~~~~~~~~~~~~~a~~i~~~l~~-~Gv~~~~ 411 (451)
T PRK07678 354 EQLKEELGEHPLVGDIRGKGLLV-GIELVNDKETKEPADNDKVASVVAACKE-KGLIIGK 411 (451)
T ss_pred HHHHHHHhcCCCEEEEEeeceEE-EEEEecCCcccCcCchHHHHHHHHHHHH-CCcEEee
Confidence 44444444444432 23344433 333321 0 00112356666665 5999976
No 291
>PRK06105 aminotransferase; Provisional
Probab=99.66 E-value=4.5e-14 Score=143.07 Aligned_cols=311 Identities=14% Similarity=0.053 Sum_probs=183.3
Q ss_pred CCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..|. -.+. .+|.+.+++.+++.+..+.........+.+.++++.+.+....+ -+ .+++++++++|++.
T Consensus 48 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~--~~-~v~f~~SGseAve~ 124 (460)
T PRK06105 48 KRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVP--MS-KVFFTNSGSEANDT 124 (460)
T ss_pred CEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCC--CC-EEEEeCCcHHHHHH
Confidence 3578887663 2222 36778889999887642211111112344555666666544321 24 79999999999999
Q ss_pred HHHHcc------C-C-CCeEEEcCCCchhHHHHHHH-cCC------------EEEEEEcCCC-CCC-----------CCH
Q 013883 186 TILGLI------N-P-GDEVILFAPFYDSYEATLSM-AGA------------KIKCITLRPP-DFA-----------IPI 232 (434)
Q Consensus 186 ~~~~l~------~-~-gd~Vlv~~p~y~~~~~~~~~-~G~------------~~~~v~~~~~-~~~-----------~d~ 232 (434)
+++... . + ..+|+...-.|++....... .|. .+..+|.... .+. ..+
T Consensus 125 AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 204 (460)
T PRK06105 125 VVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLA 204 (460)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHH
Confidence 988742 1 2 35788888888875433211 111 1122222110 000 013
Q ss_pred HHHHhhcc----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceE
Q 013883 233 EELKSTIS----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTV 307 (434)
Q Consensus 233 ~~l~~~i~----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i 307 (434)
+++++.+. ++..+|++...+.-.|.. ++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 205 ~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PD--- 281 (460)
T PRK06105 205 NELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPD--- 281 (460)
T ss_pred HHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCC---
Confidence 55666663 245566665556666775 5777899999999999999999999998865555444433333344
Q ss_pred EEccCChhhcccc-ceeeeEEeChhhHHHHHHHh-------hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 013883 308 TMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAH-------SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAI 379 (434)
Q Consensus 308 ~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~~-------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 379 (434)
+.+++|.+| .| ..+|.+++++++.+.+.... ...+++.++++..++.+.|+..++ +++.++.+++-+.
T Consensus 282 -i~~~gK~lg-gG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~--~~l~~~v~~~g~~ 357 (460)
T PRK06105 282 -ILVMSKQLS-SSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE--RDLVGNAAERGAR 357 (460)
T ss_pred -eeeeecccc-cCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHH
Confidence 558999998 67 58999999999887765321 234778888888888887775321 1234444444455
Q ss_pred HHHHhhh---CCCEeecCCeeEEEeeecCCCC-----CCC----HHHHHHHHHHhcCeEEECC
Q 013883 380 LVEGLNA---VGFKVFPSSGTYFVVVDHTPFG-----HET----DIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 380 l~~~L~~---~g~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~Ll~~~GV~v~pG 430 (434)
|.+.|++ .++......-|+++-+.+.+.. ... ...+...+++ +||++.|.
T Consensus 358 l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~-~Gvl~~~~ 419 (460)
T PRK06105 358 LQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHE-HGVISRAM 419 (460)
T ss_pred HHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHH-CCeEEEec
Confidence 5554444 3322222233444444432111 011 2356666654 59999874
No 292
>PRK06917 hypothetical protein; Provisional
Probab=99.66 E-value=5.6e-14 Score=141.92 Aligned_cols=309 Identities=16% Similarity=0.143 Sum_probs=184.3
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...||+..|.- .+. .+|.+.+++++++.+..+.+..... .+.+..+++.+.+.... ..+ .+++++++++|++.
T Consensus 31 ~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~-~~~~~~lae~L~~~~p~--~~~-~v~f~~sGsEAve~ 106 (447)
T PRK06917 31 NKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFT-SEPAEKLAKKLSDLSPG--DLN-WSFFVNSGSEANET 106 (447)
T ss_pred CEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccC-CHHHHHHHHHHHHhCCC--CCC-EEEEeCChHHHHHH
Confidence 35788876632 222 3688899999998874333222122 34556677777654421 123 79999999999999
Q ss_pred HHHHcc-------CCC-CeEEEcCCCchhHHHHHHH-cCCE------------EEEEEcCCC-C--CC--------CCHH
Q 013883 186 TILGLI-------NPG-DEVILFAPFYDSYEATLSM-AGAK------------IKCITLRPP-D--FA--------IPIE 233 (434)
Q Consensus 186 ~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~-~G~~------------~~~v~~~~~-~--~~--------~d~~ 233 (434)
+++... .+| ++|+.....|++....... .|.. +..++.... . +. -+++
T Consensus 107 AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 186 (447)
T PRK06917 107 AMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACAT 186 (447)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHH
Confidence 988652 133 6788888888886544332 2211 111221100 0 00 0245
Q ss_pred HHHhhccc----CCcEEEecCCCC-Cccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceE
Q 013883 234 ELKSTISK----NTRAILMNTPHN-PTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTV 307 (434)
Q Consensus 234 ~l~~~i~~----~~~~i~~~~p~N-PTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i 307 (434)
.+++.+.. +..+|++..... --|+ .++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 187 ~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PD--- 263 (447)
T PRK06917 187 ELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPD--- 263 (447)
T ss_pred HHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCC---
Confidence 66666642 455666654343 3445 55788899999999999999999999998755554433333333344
Q ss_pred EEccCChhhccccc-eeeeEEeChhhHHHHHHHh----hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 013883 308 TMNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQAH----SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVE 382 (434)
Q Consensus 308 ~i~S~SK~~g~~G~-R~G~~~~~~~~~~~l~~~~----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~ 382 (434)
+.+++|.+| .|+ .+|.+++++++.+.+.... ...+++.+++..+++.+.|+..++ +++.++.+++-+.|++
T Consensus 264 -i~~~gK~l~-~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~ 339 (447)
T PRK06917 264 -IMTLGKGLG-AGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEK--HNLPEKAAEKGEYLIK 339 (447)
T ss_pred -EEEeeehhc-cCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHH
Confidence 457899998 886 8999999999887765321 224677888888888888875321 1234444445555555
Q ss_pred Hhhh----CCCEe-ecCCeeEEEeeecCCC-----CCC----CHHHHHHHHHHhcCeEEECC
Q 013883 383 GLNA----VGFKV-FPSSGTYFVVVDHTPF-----GHE----TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 383 ~L~~----~g~~~-~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~Ll~~~GV~v~pG 430 (434)
.|++ .++.. +...|. ++.+.+.+. ... ....+...+++ +||++.|+
T Consensus 340 ~L~~l~~~~~~i~~vrG~Gl-~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~ 399 (447)
T PRK06917 340 GLQKVQQQSTIIGDVRGKGL-LIGVEFVADKKTKQPFSKSQAVASELISVAAK-NGLLLYPA 399 (447)
T ss_pred HHHHHHhcCCCEEEEeecce-EEEEEEeccCCcCCCCcchhHHHHHHHHHHHh-CCcEEEec
Confidence 5544 34322 233344 443433211 011 13356666665 59999874
No 293
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.65 E-value=1.7e-14 Score=141.55 Aligned_cols=221 Identities=19% Similarity=0.237 Sum_probs=141.8
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCC
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPD 227 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~ 227 (434)
+.+.++.+|+.++ .++..+++||++.++..++.+++++||+|+++..+|.+....+.+.|+.+++++...+.
T Consensus 68 I~eAe~~aA~~fG--------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 68 IKEAEELAARAFG--------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNE 139 (417)
T ss_dssp HHHHHHHHHHHHT--------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-T
T ss_pred HHHHHHHHHHhcC--------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccc
Confidence 4566666666665 34478999999999999999999999999999999999999999999999988765323
Q ss_pred C----CCCH-----HHHHhhccc--CCcE---EEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCcc-ccCCC
Q 013883 228 F----AIPI-----EELKSTISK--NTRA---ILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKL-AFEMD 292 (434)
Q Consensus 228 ~----~~d~-----~~l~~~i~~--~~~~---i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~-~~~~~ 292 (434)
+ .++. +.+++++++ ..++ +++++| +-.|++. ++++|+++|+++++.|++||||... .|..-
T Consensus 140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~P-TY~Gv~~---di~~I~~~~h~~~~~llvDEAhGah~~F~~l 215 (417)
T PF01276_consen 140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSP-TYYGVCY---DIKEIAEICHKHGIPLLVDEAHGAHFGFHPL 215 (417)
T ss_dssp TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGCSGG
T ss_pred cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCC-CCCeEEE---CHHHHHHHhcccCCEEEEEccccccccCCCC
Confidence 2 3556 899998875 3344 888888 4579988 6788999999999999999998643 34321
Q ss_pred CccccCCC---CCCCceEEEccCChhhccccc-eeeeEEeChhh---HHHHHHHhhccccCCchHHHHH----HHHHHhC
Q 013883 293 HISIASLP---GMYERTVTMNSLGKTFSLTGW-KIGWAIAPPHL---TWGVRQAHSFLTFATSTPMQWA----ATAALRA 361 (434)
Q Consensus 293 ~~~~~~~~---~~~~~~i~i~S~SK~~g~~G~-R~G~~~~~~~~---~~~l~~~~~~~~~~~~~~~q~a----~~~~L~~ 361 (434)
..+...+. .....+++++|..|.++ ++ -.++++.+.+. .++++........+.|.....+ +...++
T Consensus 216 p~~a~~~gad~~~~~~~~vvqS~HKtL~--altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~- 292 (417)
T PF01276_consen 216 PRSALALGADRPNDPGIIVVQSTHKTLP--ALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQME- 292 (417)
T ss_dssp GTTCSSTTSS-CTSBEEEEEEEHHHHSS--S-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHS-
T ss_pred ccchhhccCccccccceeeeechhhccc--ccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHh-
Confidence 11111111 11235699999999985 44 36788876553 3555554443333444433222 233331
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHh
Q 013883 362 PETYYEELKRDYSAKKAILVEGL 384 (434)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~l~~~L 384 (434)
.+.-+++.++..++.+.+++.+
T Consensus 293 -~~~G~~l~~~~i~~a~~~R~~i 314 (417)
T PF01276_consen 293 -EEEGRELLEEAIELAEEFRKKI 314 (417)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hhhhHHHHHHHHHHHHHHHHHH
Confidence 1223344455555555566665
No 294
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.65 E-value=5.7e-14 Score=151.58 Aligned_cols=309 Identities=12% Similarity=0.061 Sum_probs=188.7
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC--C--CCCCCCC----CcHHHHHHHHHHHHhhcCCCCCCCC-cEEEcCChH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG--K--NQYARGH----GVPEFNSAIASRFKKDSGLEVDPEK-EVTVTSGCT 180 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~--~--~~Y~~~~----G~~~lr~~ia~~l~~~~g~~~~~~~-~i~~t~G~~ 180 (434)
+.+-|..+.-.+.++..+.+++.+.+.+. + ..|.... -+.+.|+.++++++ .++++ +|++|+|+|
T Consensus 34 ~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lg------a~~~~~~VvFtsnaT 107 (805)
T PLN02724 34 GVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFN------APPSDYACVFTSGAT 107 (805)
T ss_pred CCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhC------CCccceEEEEeCChH
Confidence 35677666544445556666655554431 1 1111111 13456777777765 44443 589999999
Q ss_pred HHHHHHHHHc-cCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCC-------CCCCCCH--HHHHhhc--------
Q 013883 181 EAIAATILGL-INPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRP-------PDFAIPI--EELKSTI-------- 239 (434)
Q Consensus 181 ~ai~~~~~~l-~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~-------~~~~~d~--~~l~~~i-------- 239 (434)
+++.+++..+ +++||+|++..-.|.+.... ++..|++++.++.+. +...+++ +.+++.+
T Consensus 108 ~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~ 187 (805)
T PLN02724 108 AALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKRE 187 (805)
T ss_pred HHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhcccc
Confidence 9999999888 68899999976666654433 345699999988762 1223333 5566653
Q ss_pred --ccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc-----CcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccC
Q 013883 240 --SKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN-----DVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSL 312 (434)
Q Consensus 240 --~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~-----~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~ 312 (434)
.+++++|.+++.+|-||.++|.+.++++.+.++++ ++++++|.++..-. ....+..+ +-.+++.|+
T Consensus 188 ~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~---~piDv~~~----~~Dfl~~S~ 260 (805)
T PLN02724 188 DDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGT---SPPDLSRY----PADFVVVSF 260 (805)
T ss_pred ccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCC---CCCChhhc----CCCEEEEec
Confidence 13568999999999999999987655444433332 36899999986522 12222222 335888999
Q ss_pred Chhhc-cccceeeeEEeChhhHHHHHHHh------------------------hccccCCchHHHHHHHHHHhCChH-HH
Q 013883 313 GKTFS-LTGWKIGWAIAPPHLTWGVRQAH------------------------SFLTFATSTPMQWAATAALRAPET-YY 366 (434)
Q Consensus 313 SK~~g-~~G~R~G~~~~~~~~~~~l~~~~------------------------~~~~~~~~~~~q~a~~~~L~~~~~-~~ 366 (434)
.|.+| ..| +|++++++++.+.+.... ++...+++.++..++.++|+...+ .+
T Consensus 261 HK~~GgP~G--~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~ 338 (805)
T PLN02724 261 YKIFGYPTG--LGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTI 338 (805)
T ss_pred ceeccCCCC--ceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhCh
Confidence 99987 345 899999988766554211 111223444455555555554222 24
Q ss_pred HHHHHHHHHHHHHHHHHhhhC-------CCEeecC---------CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 367 EELKRDYSAKKAILVEGLNAV-------GFKVFPS---------SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 367 ~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+.+.++.++..+++.+.|.++ ++.++.+ .++.+.|.-....+..-+...+.+|++++||.++.|
T Consensus 339 ~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G 418 (805)
T PLN02724 339 SAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTG 418 (805)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeec
Confidence 566677778888888888775 2556532 234443322111111112344667778889999999
Q ss_pred CCC
Q 013883 431 SVF 433 (434)
Q Consensus 431 ~~F 433 (434)
..|
T Consensus 419 ~~C 421 (805)
T PLN02724 419 CFC 421 (805)
T ss_pred ccc
Confidence 543
No 295
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.65 E-value=2.2e-14 Score=143.78 Aligned_cols=308 Identities=13% Similarity=0.108 Sum_probs=185.5
Q ss_pred cCCeeEeCCCC--CCC-CCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNF-DGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~-~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...+|+..|. ..+ -.+|.+.+++.+++.+..+...... ..+.+..+++.+.+..+. ..+ .+++++++++|++
T Consensus 42 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~-~~~~~~~la~~L~~~~p~--~~~-~v~f~~SGsEAve 117 (428)
T PRK07986 42 GRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGI-THPPAIELCRKLVAMTPQ--PLE-CVFLADSGSVAVE 117 (428)
T ss_pred CCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcccccc-CCHHHHHHHHHHHhhCCC--CcC-EEEEeCCcHHHHH
Confidence 33578887662 112 1357888999888876432211111 234456677777655432 124 7999999999999
Q ss_pred HHHHHccC-------CCCeEEEcCCCchhHHHHHHHc-CC-------------EEEEEEcCCCCC-----CCCHHHHHhh
Q 013883 185 ATILGLIN-------PGDEVILFAPFYDSYEATLSMA-GA-------------KIKCITLRPPDF-----AIPIEELKST 238 (434)
Q Consensus 185 ~~~~~l~~-------~gd~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~~~-----~~d~~~l~~~ 238 (434)
.+++.... ...+|+....+|++........ +. .+..+|.....+ .-|++.+++.
T Consensus 118 ~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~ 197 (428)
T PRK07986 118 VAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARL 197 (428)
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHH
Confidence 99876532 2367888888888754332221 21 112222211011 1256677777
Q ss_pred ccc---CCcEEEecCC-CCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCC
Q 013883 239 ISK---NTRAILMNTP-HNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLG 313 (434)
Q Consensus 239 i~~---~~~~i~~~~p-~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~S 313 (434)
+.. +..+|++... +.-.|. .++++.+++|.++|++||+++|+||++.+|...|.......+.-.+| +.+++
T Consensus 198 l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PD----i~t~g 273 (428)
T PRK07986 198 MAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPD----ILCLG 273 (428)
T ss_pred HHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCC----EEEec
Confidence 753 3455555542 455566 44668899999999999999999999988755554433333322333 22589
Q ss_pred hhhcccc-ceeeeEEeChhhHHHHHHH-----hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 314 KTFSLTG-WKIGWAIAPPHLTWGVRQA-----HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 314 K~~g~~G-~R~G~~~~~~~~~~~l~~~-----~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
|.++ .| +.+|.+++++++.+.+... ....+++.++++.+++.+.|+..++ +++.++.+++-+++++.|+++
T Consensus 274 K~l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~--~~~~~~~~~~g~~l~~~l~~l 350 (428)
T PRK07986 274 KALT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES--GDWQQQVAAIEAQLREELAPL 350 (428)
T ss_pred hhhh-CCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHH
Confidence 9998 78 5899999999998877542 1335777888888888887775321 123455555556666666553
Q ss_pred -CCE---eecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 388 -GFK---VFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 388 -g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
... -+... |+++-+.+... .....+...+++ .||++.|.
T Consensus 351 ~~~~~i~~vRg~-Gl~~~ve~~~~--~~~~~~~~~l~~-~Gl~~~~~ 393 (428)
T PRK07986 351 RDAPMVADVRVL-GAIGVVETTRP--VNMAALQRFFVE-QGVWIRPF 393 (428)
T ss_pred hcCCCEEeEecc-ceEEEEEeCCc--ccHHHHHHHHHH-CCcEEEec
Confidence 122 12223 33444444221 124567777765 59999873
No 296
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.65 E-value=2.7e-14 Score=153.66 Aligned_cols=301 Identities=17% Similarity=0.149 Sum_probs=197.1
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCC---CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH----HH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARG---HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT----EA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~---~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~----~a 182 (434)
..|.||.-...+++.-....+.-..+. ..+-|.|. +|+.++...+.+++.+..|. + +|.++.+++ ++
T Consensus 526 ~~~plgsctmk~n~~~~~~~~~~~~~~-~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~----~-~v~f~pnaga~ge~a 599 (993)
T PLN02414 526 SMIPLGSCTMKLNATTEMMPVTWPEFA-NIHPFAPVDQAQGYQEMFEDLGDLLCEITGF----D-SFSLQPNAGAAGEYA 599 (993)
T ss_pred CCccCcccccccCchhhhhhhcCcchh-hcCCCCCHHHHHHHHHHHHHHHHHHHHHhCC----C-eEEEcCCCcHHHHHH
Confidence 456666555555543322221111111 23556663 36655555555555555554 4 799998888 89
Q ss_pred HHHHHHHccCC-CC----eEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc---CCcEEEecCCCCC
Q 013883 183 IAATILGLINP-GD----EVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK---NTRAILMNTPHNP 254 (434)
Q Consensus 183 i~~~~~~l~~~-gd----~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~---~~~~i~~~~p~NP 254 (434)
+.++++++.++ || +|+++...|......+...|++++.+|.++ ++.+|+++|++++++ ++++|++++|+|-
T Consensus 600 ~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~-~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~ 678 (993)
T PLN02414 600 GLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDA-KGNINIEELRKAAEAHKDNLAALMVTYPSTH 678 (993)
T ss_pred HHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCC-CCCcCHHHHHHHHhccCCCeEEEEEECCCcc
Confidence 99999999866 88 899999999888888888999999999974 778999999999985 6789999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc----cccceeeeEEeCh
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS----LTGWKIGWAIAPP 330 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g----~~G~R~G~~~~~~ 330 (434)
+|... .+++|+++|+++|+++++|.++..-..+ +. .++..+-.++..|..|.|+ ..|..+|++.+.+
T Consensus 679 gg~e~---~I~eI~~iah~~Galv~vDgAq~~a~~~-----l~-~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~ 749 (993)
T PLN02414 679 GVYEE---GIDEICDIIHDNGGQVYMDGANMNAQVG-----LT-SPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 749 (993)
T ss_pred ccccc---hHHHHHHHHHHcCCEEEEEecCHHhccC-----cC-CccccCCCEEEecCCccCCcCcccCCCCeeeEEEch
Confidence 99875 5788999999999999999998541111 11 1222345588888999775 3455699999887
Q ss_pred hhHHHHHH---------Hhhccc--cCC-c--h----HHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCE
Q 013883 331 HLTWGVRQ---------AHSFLT--FAT-S--T----PMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFK 390 (434)
Q Consensus 331 ~~~~~l~~---------~~~~~~--~~~-~--~----~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 390 (434)
++...+-. ..+..+ .+. + . ....++..++.. +.+.+++..+....+.+++.+.|++. ++.
T Consensus 750 ~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~ 829 (993)
T PLN02414 750 HLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVL 829 (993)
T ss_pred hhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 66543321 000011 111 1 1 222333444443 45678888888899999999999762 444
Q ss_pred eecCCeeEE--EeeecCCCC---CCCHHHHHHHHHHhcCeEE
Q 013883 391 VFPSSGTYF--VVVDHTPFG---HETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 391 ~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~Ll~~~GV~v 427 (434)
+..+.+.+| +.+++.+.. ..+..+++++|+ ++||..
T Consensus 830 ~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~-d~Giha 870 (993)
T PLN02414 830 FRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLM-DYGFHA 870 (993)
T ss_pred ccCCCCCeeeeEEEeccccccccCCCHHHHHHHHH-HcCcEE
Confidence 433333322 123433221 124688999998 568864
No 297
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.65 E-value=6.8e-14 Score=142.81 Aligned_cols=311 Identities=13% Similarity=0.092 Sum_probs=184.5
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|. ..+. .+|.+.+++.+++.+..+......+..+....+++.|.+.... .+.+ .+++++++++|+.
T Consensus 88 G~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~-~~~~-~v~f~~SGsEA~e 165 (504)
T PLN02760 88 GKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTA-RKMG-KVFFTNSGSEAND 165 (504)
T ss_pred CCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCC-CCCC-EEEEeCChHHHHH
Confidence 44678987762 2222 4678889999988764321111112345566667766544221 1123 6899999999999
Q ss_pred HHHHHcc-------CCC-CeEEEcCCCchhHHHH-HHHcCCE------------EEEEEcCCCCCC-------------C
Q 013883 185 ATILGLI-------NPG-DEVILFAPFYDSYEAT-LSMAGAK------------IKCITLRPPDFA-------------I 230 (434)
Q Consensus 185 ~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~-~~~~G~~------------~~~v~~~~~~~~-------------~ 230 (434)
.+++... .++ ++|+..+-.|++.... +...|.+ +..+++.. .+. .
T Consensus 166 ~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~ 244 (504)
T PLN02760 166 TQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH-YWRFHLPGETEEEFSTR 244 (504)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCc-ccccCCCCCcHHHHHHH
Confidence 9988663 123 5788888888876432 2223321 11222110 000 0
Q ss_pred CHHHHHhhcc----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCc
Q 013883 231 PIEELKSTIS----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYER 305 (434)
Q Consensus 231 d~~~l~~~i~----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~ 305 (434)
..+.+++.+. ++..+|++.....-.|.+ ++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 245 ~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PD- 323 (504)
T PLN02760 245 LADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPD- 323 (504)
T ss_pred HHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCc-
Confidence 1244666553 234566665556666775 4677799999999999999999999998865555443333322344
Q ss_pred eEEEccCChhhccccc-eeeeEEeChhhHHHHHHH-------hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 013883 306 TVTMNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQA-------HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKK 377 (434)
Q Consensus 306 ~i~i~S~SK~~g~~G~-R~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 377 (434)
+.+|+|.+| .|. .+|.+++++++.+.+... ....+++.++.+.+++.+.|+..++ +++.++.+++-
T Consensus 324 ---ivtlgK~lg-gG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~--~~l~~~~~~~g 397 (504)
T PLN02760 324 ---LVSLAKALS-SAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKE--RNIPEHVNKIA 397 (504)
T ss_pred ---EEEeccccc-CCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHH
Confidence 678999998 674 899999999998877531 2335788888888888888875321 13344555555
Q ss_pred HHHHHHhhhC---CCE-eecCCeeEEEeeecCCCC-----CC----CHHHHHHHHHHhcCeEEECC
Q 013883 378 AILVEGLNAV---GFK-VFPSSGTYFVVVDHTPFG-----HE----TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 378 ~~l~~~L~~~---g~~-~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~Ll~~~GV~v~pG 430 (434)
+.|++.|+++ ++. .+...|. ++-+.+.... .. ....+.+.+++ +||.+.++
T Consensus 398 ~~l~~~L~~l~~~~~v~~vrG~Gl-~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~ 461 (504)
T PLN02760 398 PRFQDGIKAFSGSPIIGEIRGTGL-ILGTEFVDNKSPNDPFPAEWGVGAYFGAECKK-RGMLVRVA 461 (504)
T ss_pred HHHHHHHHHHhcCCCeeeEEeCce-EEEEEEecCCcccccccchhHHHHHHHHHHHh-CCcEEEec
Confidence 5555555443 322 1233444 3344332110 00 02345666655 59998874
No 298
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.65 E-value=5.6e-14 Score=142.36 Aligned_cols=312 Identities=13% Similarity=0.063 Sum_probs=181.6
Q ss_pred cCCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCC-CCcEEE-cCChHHH
Q 013883 108 KHGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDP-EKEVTV-TSGCTEA 182 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~~i~~-t~G~~~a 182 (434)
+...||+..|+-. +. .+|.+.+++++++.+......... ..+.+..+++.+.......... + .+++ ++++++|
T Consensus 62 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~-~~~~~~~la~~L~~~~p~~~~~~~-~v~f~~~SGSEA 139 (464)
T PRK06938 62 GRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDL-TTPVKDQFVQDLFASLPEAFAREA-KIQFCGPTGTDA 139 (464)
T ss_pred CCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccccc-CCHHHHHHHHHHHHhCcccccccc-eEEEeCCCcHHH
Confidence 3457888666322 22 367788899888864321111111 1244555666665433222211 2 4655 4788999
Q ss_pred HHHHHHHcc--CCCCeEEEcCCCchhHHHHHHH-cC------------CEEEEEEcCCCC---CC--------CCHHHHH
Q 013883 183 IAATILGLI--NPGDEVILFAPFYDSYEATLSM-AG------------AKIKCITLRPPD---FA--------IPIEELK 236 (434)
Q Consensus 183 i~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~G------------~~~~~v~~~~~~---~~--------~d~~~l~ 236 (434)
++.+++... ...++|+...-.|++....... .| ..+..+|+.... ++ .+++.++
T Consensus 140 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 219 (464)
T PRK06938 140 VEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLE 219 (464)
T ss_pred HHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHH
Confidence 999987653 2346788888888886544332 11 012334332100 00 1367777
Q ss_pred hhccc------CCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEE
Q 013883 237 STISK------NTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTM 309 (434)
Q Consensus 237 ~~i~~------~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i 309 (434)
+.+.. ++.+|++...+.-.|.+ ++.+.+++|.++|++||+++|.||++.+|...|.......+.-.+| +
T Consensus 220 ~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PD----i 295 (464)
T PRK06938 220 NLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPD----V 295 (464)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCC----E
Confidence 77753 34566665445555765 4688899999999999999999999999866665444444433344 5
Q ss_pred ccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh---
Q 013883 310 NSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA--- 386 (434)
Q Consensus 310 ~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~--- 386 (434)
.+++|.+| .|+.+|.+++++++ +.+.......+++.++.+..++.+.|+.-++ +++.++.+++-+++.+.|++
T Consensus 296 v~~gKglg-gG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~--~~l~~~~~~~G~~l~~~L~~l~~ 371 (464)
T PRK06938 296 VVLSKAIG-GSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKE--HRLAEHAAAMGERLREHLRQLQR 371 (464)
T ss_pred EEeecccc-CCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 56799998 89999999998774 4443223345788888988888888875321 12334444444444444443
Q ss_pred -CCCEeecCCeeEEEeeecCCC-CC-----------CCHHHHHHHHHHhcCeEEECC
Q 013883 387 -VGFKVFPSSGTYFVVVDHTPF-GH-----------ETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 387 -~g~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~~~~Ll~~~GV~v~pG 430 (434)
.++......-|+++-+.+... .. .....+...+++ +||.+.++
T Consensus 372 ~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~ 427 (464)
T PRK06938 372 DYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLR-RGLILELG 427 (464)
T ss_pred hCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHH-CCeEEeec
Confidence 343222223334444444211 00 012345666665 59999874
No 299
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.65 E-value=1.2e-14 Score=142.46 Aligned_cols=286 Identities=15% Similarity=0.122 Sum_probs=180.8
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...+|+..|. ..+. .+|.+.+++.+++.+..+ +.+... .+.+..+++.+.+..+ .+ .+++++++++|++
T Consensus 23 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~~~~~-~~~~~~la~~l~~~~~----~~-~v~~~~SGseA~e 95 (364)
T PRK04013 23 GRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVV-AGPMFE-HEEKEEMLEELSKWVN----YE-YVYMGNSGTEAVE 95 (364)
T ss_pred CCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCC-ccCCcC-CHHHHHHHHHHHhhcC----CC-EEEEeCchHHHHH
Confidence 33578886663 2222 356777899888876422 122122 2334555555554332 24 7999999999999
Q ss_pred HHHHHcc-CCC-CeEEEcCCCchhHHHHHHHc-CC------------EEEEEEcCCCCCCCCHHHHHhhcccCCcEEEec
Q 013883 185 ATILGLI-NPG-DEVILFAPFYDSYEATLSMA-GA------------KIKCITLRPPDFAIPIEELKSTISKNTRAILMN 249 (434)
Q Consensus 185 ~~~~~l~-~~g-d~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~ 249 (434)
.+++... .+| ++|+....+|++........ +- .+..+|+ .|++.+++.+.+++++|++.
T Consensus 96 ~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~------~d~~~l~~~i~~~~aAvivE 169 (364)
T PRK04013 96 AALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF------NDVEAAKEAITKETAAVIFE 169 (364)
T ss_pred HHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC------CCHHHHHHHhcCCcEEEEEc
Confidence 9988663 234 88999999998865433321 11 1112221 26788999998888888887
Q ss_pred CCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEe
Q 013883 250 TPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 328 (434)
Q Consensus 250 ~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~ 328 (434)
..+...|.. ++.+.+++|.++|++||+++|+||++.++ ..|.......+.-.+| +.+++|.+| .|+.+|.++.
T Consensus 170 pi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PD----iv~~gK~lg-gG~P~~a~~~ 243 (364)
T PRK04013 170 PIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPD----IVTMGKGIG-NGVPVSLTLT 243 (364)
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCC----EEEeccccc-CCceeEEEEe
Confidence 666666664 46677999999999999999999999998 6665444443333344 556799999 7899999998
Q ss_pred ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCC
Q 013883 329 PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTP 406 (434)
Q Consensus 329 ~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 406 (434)
+.++. ......+++.++.+..++.+.|+.- ++.+++.++. +. .+...-+.-+... |.++-+.+..
T Consensus 244 ~~~~~----~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~-~l~~~~v~~vRG~-Gl~~gve~~~ 310 (364)
T PRK04013 244 NFDVE----RGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------FI-EIKGERVVTTRGR-GLMIGIVLKK 310 (364)
T ss_pred ccccc----CCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH-------HH-HhccCcceeeeeC-cEEEEEEeCC
Confidence 87752 1223457888888888888888753 2222332221 22 2222111222333 4455555532
Q ss_pred CCCCCHHHHHHHHHHhcCeEEECC
Q 013883 407 FGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 407 ~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+...+.+.+++ +||.+.+.
T Consensus 311 ----~~~~i~~~~~~-~Gll~~~~ 329 (364)
T PRK04013 311 ----PVGKYVEELQN-RGYLVHTA 329 (364)
T ss_pred ----cHHHHHHHHHh-CCcEEeeC
Confidence 24567777765 59998763
No 300
>PRK06062 hypothetical protein; Provisional
Probab=99.64 E-value=9.2e-14 Score=140.48 Aligned_cols=244 Identities=16% Similarity=0.135 Sum_probs=157.4
Q ss_pred cCCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...||+..|.- .+. .+|.+.+++.+++....+. .+... .+.+..+++.+.+.... ..+ .+++++++++|++
T Consensus 52 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~-~~~~~-~~~~~~lae~L~~~~p~--~~~-~v~f~~SGsEAve 126 (451)
T PRK06062 52 GRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTV-APAHA-NDARSEAARLIAERAPG--DLS-KVFFTNGGADANE 126 (451)
T ss_pred CCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCc-CCccC-CHHHHHHHHHHHHhCCC--CCC-EEEEcCChHHHHH
Confidence 346788876632 122 3577888998888764322 22222 34456667776654321 124 7999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHHc-CCE-----------EEEEEcCC--C-CCC--CC-------HHHHHhh
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSMA-GAK-----------IKCITLRP--P-DFA--IP-------IEELKST 238 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G~~-----------~~~v~~~~--~-~~~--~d-------~~~l~~~ 238 (434)
.+++... ....+|+.....|++........ |.. +..++... . .+. -| ++.+++.
T Consensus 127 ~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~ 206 (451)
T PRK06062 127 HAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERV 206 (451)
T ss_pred HHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHH
Confidence 9987653 23467888888888865443322 211 12222111 0 010 12 5677777
Q ss_pred cc----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCC
Q 013883 239 IS----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLG 313 (434)
Q Consensus 239 i~----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~S 313 (434)
+. ++..+|++.....-.|.+ ++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+| +.+|+
T Consensus 207 l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PD----i~t~g 282 (451)
T PRK06062 207 IELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPD----LITFA 282 (451)
T ss_pred HHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCC----eeeec
Confidence 74 234566665546566776 4677799999999999999999999999865554433333332344 55799
Q ss_pred hhhccccc-eeeeEEeChhhHHHHHHH--hhccccCCchHHHHHHHHHHhC
Q 013883 314 KTFSLTGW-KIGWAIAPPHLTWGVRQA--HSFLTFATSTPMQWAATAALRA 361 (434)
Q Consensus 314 K~~g~~G~-R~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~q~a~~~~L~~ 361 (434)
|.+| .|+ .+|.+++.+++.+.+... ....+|+.++.+.+++.+.|+.
T Consensus 283 K~lg-gG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~ 332 (451)
T PRK06062 283 KGVN-SGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINA 332 (451)
T ss_pred hhhh-cCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9998 785 899999999988877532 2334788888888888888875
No 301
>PRK04311 selenocysteine synthase; Provisional
Probab=99.64 E-value=4.4e-14 Score=142.21 Aligned_cols=246 Identities=18% Similarity=0.168 Sum_probs=157.7
Q ss_pred CcHHHHHHHHHHHHcCC-CCCCCC---CC--cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCe
Q 013883 123 GPDFVKDAAIQAIRDGK-NQYARG---HG--VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDE 196 (434)
Q Consensus 123 ~~~~v~~~~~~~~~~~~-~~Y~~~---~G--~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~ 196 (434)
.++.+.+++.+.+.... ..|... .| +..+++.++++++ .+ ..+++++++.|+.+++.+ +.+||+
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~G--------ae-~a~vv~sgtaAl~l~l~~-l~~Gde 167 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTG--------AE-DALVVNNNAAAVLLALNA-LAAGKE 167 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhC--------CC-eEEEECCHHHHHHHHHHH-hCCCCE
Confidence 46778888888776532 222221 12 2356666766665 34 466777778999988865 589999
Q ss_pred EEEcCCCchh------HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCc--cc--CCCHHHHHH
Q 013883 197 VILFAPFYDS------YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPT--GK--MFTREELNV 266 (434)
Q Consensus 197 Vlv~~p~y~~------~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPT--G~--~~~~e~l~~ 266 (434)
|++.+..+.. ....+...|++++.++... ..++++++++++++|++|+++++.||+ |. .. ++++
T Consensus 168 VIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~---~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~---dl~e 241 (464)
T PRK04311 168 VIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN---RTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEV---SLAE 241 (464)
T ss_pred EEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC---CCCHHHHHHhcCccCeEEEEEcCCCccccccCCcC---CHHH
Confidence 9998764431 2345677899999887642 347899999999999999999999983 53 33 5788
Q ss_pred HHHHHHHcCcEEEEcCcCCccc----cC-CCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhh
Q 013883 267 IASLCIENDVLVFSDEVYDKLA----FE-MDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS 341 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~----~~-~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~ 341 (434)
|+++|++||+++|+|.+.+.+. ++ ...+.+.... ..+-.+++.|..|.+| |...|++++++++++++++..-
T Consensus 242 I~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l-~~GaDiv~fSg~K~Lg--Gp~~G~i~g~~~li~~l~~~~~ 318 (464)
T PRK04311 242 LAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELL-AAGVDLVTFSGDKLLG--GPQAGIIVGKKELIARLKKHPL 318 (464)
T ss_pred HHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHH-hcCCcEEEecCccccc--CCceEEEEEcHHHHHHHhhchh
Confidence 9999999999999999644321 11 0011111111 1244688999999986 4469999999999887764222
Q ss_pred ccccCCchHHHHHHHHHHh---CCh-HH--------HHHHHHHHHHHHHHHHHHhhhC
Q 013883 342 FLTFATSTPMQWAATAALR---APE-TY--------YEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 342 ~~~~~~~~~~q~a~~~~L~---~~~-~~--------~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
...+........+..+.|. +++ .+ +....++..++.+.+.+.|+..
T Consensus 319 ~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~ 376 (464)
T PRK04311 319 KRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAA 376 (464)
T ss_pred HHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 1223333333333333333 111 11 1122356666777788888764
No 302
>PRK07481 hypothetical protein; Provisional
Probab=99.64 E-value=1.3e-13 Score=139.54 Aligned_cols=311 Identities=14% Similarity=0.131 Sum_probs=181.9
Q ss_pred CCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...||+..|. ..+. .+|.+.+++.+++.+..+.........+.+..+++.+.+..+. -..+ .+++++++++|++.
T Consensus 42 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~-~~~~-~v~f~~sGsEAve~ 119 (449)
T PRK07481 42 KKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAP-EGMR-RVFFSSGGSDSVET 119 (449)
T ss_pred CEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCC-CCCC-EEEEcCchHHHHHH
Confidence 3568876652 2222 3577888998888764321110001124455667766654421 1124 79999999999999
Q ss_pred HHHHccC-------CC-CeEEEcCCCchhHHHHHHHcCC-------------EEEEEEcCCC---CCC-CCHHH------
Q 013883 186 TILGLIN-------PG-DEVILFAPFYDSYEATLSMAGA-------------KIKCITLRPP---DFA-IPIEE------ 234 (434)
Q Consensus 186 ~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~---~~~-~d~~~------ 234 (434)
+++.... +| .+|+...-.|++.......... .+..++.... .+. .|.+.
T Consensus 120 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~ 199 (449)
T PRK07481 120 ALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICA 199 (449)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHH
Confidence 9876531 23 5788888888886543222211 1222222110 011 13333
Q ss_pred --HHhhcc----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceE
Q 013883 235 --LKSTIS----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTV 307 (434)
Q Consensus 235 --l~~~i~----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i 307 (434)
+++.+. +++.+|++...+.-.|.+ ++.+.+++|.++|++||+++|.||++.+|...|.......+.-.+|
T Consensus 200 ~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PD--- 276 (449)
T PRK07481 200 RLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPD--- 276 (449)
T ss_pred HHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCC---
Confidence 334332 345667766556666774 5677799999999999999999999999866654433333333344
Q ss_pred EEccCChhhcccc-ceeeeEEeChhhHHHHHHH-------hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 013883 308 TMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQA-------HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAI 379 (434)
Q Consensus 308 ~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 379 (434)
+-+++|.++ .| +.+|.+++++++.+.+... ....+++.++++..++.+.|+..++ +++.++.+++-+.
T Consensus 277 -iv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~ 352 (449)
T PRK07481 277 -IMCLAKGIT-SGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVR--EDLPANAAKRGAY 352 (449)
T ss_pred -EEEEeeccc-CCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHH
Confidence 556799998 78 4899999999988776531 2334778888888888888875221 1233444444555
Q ss_pred HHHHhhh----CCCEe-ecCCeeEEEeeecCCCC-----CC----CHHHHHHHHHHhcCeEEECC
Q 013883 380 LVEGLNA----VGFKV-FPSSGTYFVVVDHTPFG-----HE----TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 380 l~~~L~~----~g~~~-~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~Ll~~~GV~v~pG 430 (434)
+.+.|++ .++.. +...|. ++-+.+.... .+ ....+...+++ .||++.|.
T Consensus 353 l~~~L~~l~~~~~~i~~vrG~Gl-m~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~ 415 (449)
T PRK07481 353 LLEGLQPLKERFELVGDVRGKGL-MLALDLVADKATREPIDPSKGYANAVADVARE-NGVLVRPS 415 (449)
T ss_pred HHHHHHHHhhcCCCeEEEeecce-EEEEEecccccccCCCCchhHHHHHHHHHHHh-CCeEEEec
Confidence 5555544 33322 233444 4444442110 00 12345556655 59999874
No 303
>PLN03032 serine decarboxylase; Provisional
Probab=99.63 E-value=1.4e-13 Score=134.87 Aligned_cols=243 Identities=15% Similarity=0.057 Sum_probs=169.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcE--EEcCChHHHHHHHHHHcc--CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEV--TVTSGCTEAIAATILGLI--NPGDEVILFAPFYDSYEATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i--~~t~G~~~ai~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 223 (434)
..++.+.+.+++.+..|. +++ ++ ++|+|+|+++..++.... .++..|+++.-.|......++.+|.++..||.
T Consensus 64 a~~~e~~v~~~ia~llg~--~~~-~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~ 140 (374)
T PLN03032 64 SRQFEVGVLDWFARLWEL--EKD-EYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPT 140 (374)
T ss_pred HHHHHHHHHHHHHHHhCC--CCc-cCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeee
Confidence 467777777777777775 344 55 899999999988876654 34568889989999999999999999999998
Q ss_pred CCCCCCCCHHHHHhhccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcC-----cEEEEcCcCCcccc--CCCC
Q 013883 224 RPPDFAIPIEELKSTISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIEND-----VLVFSDEVYDKLAF--EMDH 293 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~-----~~iI~Deay~~~~~--~~~~ 293 (434)
++ ++.+|++.|++++++ ++.+|+++..+|+||.+-| +++|+++|+++| +|+.+|.+|.++.. ....
T Consensus 141 d~-~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~ 216 (374)
T PLN03032 141 LP-SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRA 216 (374)
T ss_pred CC-CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCC
Confidence 75 788999999999987 4667777788999999975 566888899986 59999999987532 1111
Q ss_pred ccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc-----ccCCch--HHHHHHHHHHhC-ChHH
Q 013883 294 ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL-----TFATST--PMQWAATAALRA-PETY 365 (434)
Q Consensus 294 ~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~-----~~~~~~--~~q~a~~~~L~~-~~~~ 365 (434)
+. ..+. ..-..+..|..|.+| .-..+|.++.+.+.++.+.....+. +...+. .....+...|.. +.+.
T Consensus 217 ~~-~~~~--~~vDSis~s~HK~~g-~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g 292 (374)
T PLN03032 217 PE-VTFR--KPIGSVSVSGHKFLG-CPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRG 292 (374)
T ss_pred cc-cCCC--cCCcEEEECcccccC-CCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHH
Confidence 11 1111 122346678899887 3345899999877665443211111 122222 222233333433 4567
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCEee-cCCeeEEEe
Q 013883 366 YEELKRDYSAKKAILVEGLNAVGFKVF-PSSGTYFVV 401 (434)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~ 401 (434)
++++.++..++.+++.+.|++.++.+. .|.....+|
T Consensus 293 ~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~~V~f 329 (374)
T PLN03032 293 IKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSSTVVF 329 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcEEECCCceEEEE
Confidence 788889999999999999999888754 455554433
No 304
>PRK12403 putative aminotransferase; Provisional
Probab=99.63 E-value=2.4e-13 Score=137.81 Aligned_cols=244 Identities=15% Similarity=0.106 Sum_probs=150.2
Q ss_pred CCeeEeCCCC----CCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 109 HGAINLGQGF----PNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 109 ~~~i~l~~g~----p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
...|||..|. -++ .+|.+.+++.+++++..+...-..+..+....+++.+.+..+.. .+ .+++++++++|+.
T Consensus 54 ~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~--~~-~v~f~~SGseA~e 129 (460)
T PRK12403 54 KRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGH--YS-HAIYTNSGSEANE 129 (460)
T ss_pred CEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCC--cC-EEEEeCCcHHHHH
Confidence 3578876652 223 46889999999987632211111122345556666666544321 24 7999999999999
Q ss_pred HHHHHcc-------CCCCe-EEEcCCCchhHHH-HHHHcCCE-----------EEEEEcCC---CCCCC--------CHH
Q 013883 185 ATILGLI-------NPGDE-VILFAPFYDSYEA-TLSMAGAK-----------IKCITLRP---PDFAI--------PIE 233 (434)
Q Consensus 185 ~~~~~l~-------~~gd~-Vlv~~p~y~~~~~-~~~~~G~~-----------~~~v~~~~---~~~~~--------d~~ 233 (434)
.+++... ++++. |+.....|++... .+...|.+ +..+|... ..+.. +++
T Consensus 130 ~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (460)
T PRK12403 130 VLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAAL 209 (460)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence 9988763 23333 4455567776532 22222221 22232211 00111 134
Q ss_pred HHHhhcc----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEE
Q 013883 234 ELKSTIS----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVT 308 (434)
Q Consensus 234 ~l~~~i~----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~ 308 (434)
.+++.+. ++..+|++.....-.|.+ ++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 210 ~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PD---- 285 (460)
T PRK12403 210 QLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPD---- 285 (460)
T ss_pred HHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCC----
Confidence 5555542 234556665446666765 4677799999999999999999999998866665444333333333
Q ss_pred EccCChhhccccc-eeeeEEeChhhHHHHHHH----hhccccCCchHHHHHHHHHHhC
Q 013883 309 MNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQA----HSFLTFATSTPMQWAATAALRA 361 (434)
Q Consensus 309 i~S~SK~~g~~G~-R~G~~~~~~~~~~~l~~~----~~~~~~~~~~~~q~a~~~~L~~ 361 (434)
+.+++|.+| .|+ .+|.+++++++.+.+... ....+++.++.+.+++.+.|+.
T Consensus 286 iv~~gK~lg-gG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~ 342 (460)
T PRK12403 286 TLSIAKGLT-SGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKA 342 (460)
T ss_pred eEEEccccc-ccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHH
Confidence 335899998 785 899999998888776421 1234677888888888888875
No 305
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=1.9e-13 Score=138.28 Aligned_cols=309 Identities=15% Similarity=0.112 Sum_probs=180.0
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|. ..+. .+|.+.+++.+++.+..+. .......+....+++.+.+..+. ..+ .+++++++++|++
T Consensus 52 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~-~~~~~~~~~~~~lae~L~~~~p~--~~~-~v~f~~SGsEA~e 127 (457)
T PRK05639 52 GNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHS-MIGYTHSERAIRVAEKLAEISPI--ENP-KVLFGLSGSDAVD 127 (457)
T ss_pred CCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcccc-ccCccCCHHHHHHHHHHHhhCCC--CcC-EEEEeCchHHHHH
Confidence 34678887763 2222 3677888898888763211 11111123444566666544321 124 7999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHH-cCC-------------EEEEEEcCCCC---CC----CCH--------H
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSM-AGA-------------KIKCITLRPPD---FA----IPI--------E 233 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~G~-------------~~~~v~~~~~~---~~----~d~--------~ 233 (434)
.+++... ....+|+.....|++....... .|. .+..+|+.... +. .|. +
T Consensus 128 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (457)
T PRK05639 128 MAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLD 207 (457)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHH
Confidence 9987653 3345788888888885543222 221 13344433100 00 022 2
Q ss_pred HHHhhc------ccCCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCce
Q 013883 234 ELKSTI------SKNTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERT 306 (434)
Q Consensus 234 ~l~~~i------~~~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~ 306 (434)
.+++.+ ..+..+|++...+...|. .++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 208 ~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD-- 285 (457)
T PRK05639 208 YLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPD-- 285 (457)
T ss_pred HHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCC--
Confidence 344443 235666777655666677 45677799999999999999999999998765554333333322334
Q ss_pred EEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh
Q 013883 307 VTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA 386 (434)
Q Consensus 307 i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~ 386 (434)
+-+|+|.+| .|+.+|.+++++++.+.. .-....+++.++....++.+.|+.-++ ++..++.+++-++|++.|++
T Consensus 286 --iv~~gK~l~-gG~pi~av~~~~~i~~~~-~~~~~~T~~g~p~~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~ 359 (457)
T PRK05639 286 --LIIFGKGVA-SGMGLSGVIGRKELMDLT-SGSALLTPAANPVISAAAEATLEIIEE--ENLLKNALKVGEFIKKRLLE 359 (457)
T ss_pred --EEEechhhc-CCCcceeEEehHHHHhhc-CCCcccCCCcCHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHH
Confidence 333899998 889999999999988722 111234667777777777777765211 12334444444555555544
Q ss_pred ----CCCEe-ecCCeeEEEeeecCC-CCCC---CHHHHHHHHHHhcCeEEECC
Q 013883 387 ----VGFKV-FPSSGTYFVVVDHTP-FGHE---TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 387 ----~g~~~-~~~~~~~~~~~~~~~-~~~~---~~~~~~~~Ll~~~GV~v~pG 430 (434)
.++.. +...|. ++-+.+.. .... ....+...+++ +||++.+.
T Consensus 360 l~~~~~~~~~VrG~Gl-~~gve~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~ 410 (457)
T PRK05639 360 MKESFEVIGDVRGKGL-MIGVEIVKENGKPDPELTGKICWRAFE-LGLILPSY 410 (457)
T ss_pred HHHhCCCEEeecccee-EEEEEEecCCCCCCHHHHHHHHHHHHh-CCeEEeec
Confidence 34332 233444 44444321 1111 12356666665 59999773
No 306
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=1.5e-13 Score=139.18 Aligned_cols=309 Identities=15% Similarity=0.109 Sum_probs=181.1
Q ss_pred cCCeeEeCCC-CCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 108 KHGAINLGQG-FPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 108 ~~~~i~l~~g-~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
+...|||..+ ...+. .+|.+.+++.+++....+ ....-..+.+..+++.+.+..+. ..+ .+++++++++|++.
T Consensus 71 G~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~lae~L~~~~p~--~~~-~v~f~~sGseAve~ 145 (459)
T PRK06082 71 GKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPF--SPRRFTNETAIECAEKLTEIAGG--ELN-RVLFAPGGTSAIGM 145 (459)
T ss_pred CCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCC--ccCccCCHHHHHHHHHHHHhCCC--CCC-EEEECCCcHHHHHH
Confidence 3457887622 22233 577888999998876322 11111235566677777655432 124 79999999999999
Q ss_pred HHHHcc--CCCCeEEEcCCCchhHHH-HHHHcCCE------------EEEEEcCCC-C--CC-C------CHHHHHhhcc
Q 013883 186 TILGLI--NPGDEVILFAPFYDSYEA-TLSMAGAK------------IKCITLRPP-D--FA-I------PIEELKSTIS 240 (434)
Q Consensus 186 ~~~~l~--~~gd~Vlv~~p~y~~~~~-~~~~~G~~------------~~~v~~~~~-~--~~-~------d~~~l~~~i~ 240 (434)
+++... ....+|+.....|++... .+...|.. +..+|.... . +. . +++.+++.+.
T Consensus 146 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 225 (459)
T PRK06082 146 ALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIE 225 (459)
T ss_pred HHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHh
Confidence 887553 234678888888877543 23222221 122222110 0 10 0 1345777665
Q ss_pred c--CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcc
Q 013883 241 K--NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSL 318 (434)
Q Consensus 241 ~--~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 318 (434)
. +..+|++....+..+..++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+| +.+++|.+|
T Consensus 226 ~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PD----iv~~gKgl~- 300 (459)
T PRK06082 226 KEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPD----ILCIGKGLG- 300 (459)
T ss_pred cCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCC----EEEeccccc-
Confidence 3 455666654455545567888899999999999999999999999866655433333332344 334899999
Q ss_pred cc-ceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh----CCCE-ee
Q 013883 319 TG-WKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA----VGFK-VF 392 (434)
Q Consensus 319 ~G-~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~ 392 (434)
.| ..+|.+++++++...........+++.++++.+++.+.|+..++ +++.++.+++-++|++.|++ .++. -+
T Consensus 301 gG~~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 378 (459)
T PRK06082 301 GGLVPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQ--EGLLEKVKADSQFMRERLLEMKAKYPLIGDV 378 (459)
T ss_pred CCCCcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhhCCCeeee
Confidence 77 48999999888654332111124778888888888888775321 12444555555555555544 3332 22
Q ss_pred cCCeeEEEeeecCCC-C-CC----CHHHHHHHHHHhcCeEEECC
Q 013883 393 PSSGTYFVVVDHTPF-G-HE----TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 393 ~~~~~~~~~~~~~~~-~-~~----~~~~~~~~Ll~~~GV~v~pG 430 (434)
...|. ++-+.+... . .. ....+...+++ .||++.|.
T Consensus 379 rG~Gl-~~~ve~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~ 420 (459)
T PRK06082 379 RGIGL-LWGVELVTDRHTKERAYDEAEAVLYRCLN-NGLSFKVS 420 (459)
T ss_pred eeccc-eeEEEEccCccccCccHHHHHHHHHHHHh-CCCEEEec
Confidence 34444 434444211 0 00 12345566655 59998773
No 307
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.63 E-value=3.2e-14 Score=128.70 Aligned_cols=291 Identities=18% Similarity=0.160 Sum_probs=194.6
Q ss_pred CeeEeCCC-CCCCCCcHHHHHHHHHHHHcCCCCCC---CCCCc----HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQG-FPNFDGPDFVKDAAIQAIRDGKNQYA---RGHGV----PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~~~~Y~---~~~G~----~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
+.+||+.+ |.++..+|++.++-++++++...+-. -+-|. ..|...||++.+ .| +.++...+..
T Consensus 68 ~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~--------rE-D~ilypscfd 138 (417)
T KOG1359|consen 68 KILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHG--------RE-DTILYPSCFD 138 (417)
T ss_pred ceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhC--------CC-ceEEeccccc
Confidence 67899876 88999999999999999887211111 11233 456666666655 34 5677777799
Q ss_pred HHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc----cCCcEEEecCCCCCccc
Q 013883 182 AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS----KNTRAILMNTPHNPTGK 257 (434)
Q Consensus 182 ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~ 257 (434)
|...++.+++.|.|.|+-....+....+.+.++. + -..+|+-.++..+. .+-|+|+.-..-...|.
T Consensus 139 ANag~feail~pedAvfSDeLNhASIIdGirLck-r---------y~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGd 208 (417)
T KOG1359|consen 139 ANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK-R---------YRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGD 208 (417)
T ss_pred cchHHHHHhcChhhhhhccccccchhhhhhHHHh-h---------hccchhHHHHHHHHHhhhheEEEEEecceeccCCC
Confidence 9999999999999999998888888887777665 1 12345555655443 35566665566788898
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCC-CCCCCceEEEccCChhhccccceeeeEEeChhhHHHH
Q 013883 258 MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASL-PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV 336 (434)
Q Consensus 258 ~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~-~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l 336 (434)
+.|.+ +|.+++++||.++++||++..+.++......... ..+.+..+..++++|.+| |--.||..+++.+++-+
T Consensus 209 iaPl~---ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~~li~ll 283 (417)
T KOG1359|consen 209 IAPLE---EISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPKPLISLL 283 (417)
T ss_pred cccHH---HHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCChhHHHHH
Confidence 88755 5888899999999999999998887655444333 223456688889999997 44459999999999988
Q ss_pred HHHhhccccCCchH-H-HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHH
Q 013883 337 RQAHSFLTFATSTP-M-QWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIA 414 (434)
Q Consensus 337 ~~~~~~~~~~~~~~-~-q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (434)
+...+..-|+.+.+ + --.++.++.-.- .-.+...+.+.+.+.+++.++..|+.+......... +-+ .+...+..
T Consensus 284 rqr~RpylFSnslppavV~~a~ka~dllm-~s~~~i~~~~a~~qrfr~~me~aGftIsg~~hPI~p-v~l--Gda~lA~~ 359 (417)
T KOG1359|consen 284 RQRSRPYLFSNSLPPAVVGMAAKAYDLLM-VSSKEIQSRQANTQRFREFMEAAGFTISGASHPICP-VML--GDARLASK 359 (417)
T ss_pred HhcCCceeecCCCChhhhhhhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCceecCCCCCccc-eec--ccHHHHHH
Confidence 87776554443332 1 111222222100 012334555667778888888889988654433221 111 11123557
Q ss_pred HHHHHHHhcCeEEEC
Q 013883 415 FCEYLIKEVGVVAIP 429 (434)
Q Consensus 415 ~~~~Ll~~~GV~v~p 429 (434)
+++.|+++ ||+|..
T Consensus 360 ~ad~lLk~-Gi~Vig 373 (417)
T KOG1359|consen 360 MADELLKR-GIYVIG 373 (417)
T ss_pred HHHHHHhc-CceEEe
Confidence 88888876 999874
No 308
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.63 E-value=1.4e-13 Score=139.18 Aligned_cols=310 Identities=13% Similarity=0.091 Sum_probs=187.2
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...||+..|. -.+. .+|.+.+++.+++.+..+....... .+.+..+++.+.+..+.. -+ .+++++++++|++
T Consensus 53 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~-~~~~~~lAe~L~~~~p~~--~~-~v~f~~sGseAve 128 (453)
T PRK06943 53 GRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCT-HEPAIELAERLAALTGGT--LG-HAFFASDGASAVE 128 (453)
T ss_pred CCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccC-CHHHHHHHHHHHHhCCCC--CC-EEEEeCCCHHHHH
Confidence 34578886662 2222 3677888898888764221111111 244556777776544322 23 7999999999999
Q ss_pred HHHHHcc-------CC-CCeEEEcCCCchhHHHHHHH-cCC------------EEEEEEcCCCC---CC--------CCH
Q 013883 185 ATILGLI-------NP-GDEVILFAPFYDSYEATLSM-AGA------------KIKCITLRPPD---FA--------IPI 232 (434)
Q Consensus 185 ~~~~~l~-------~~-gd~Vlv~~p~y~~~~~~~~~-~G~------------~~~~v~~~~~~---~~--------~d~ 232 (434)
.+++... .+ ..+|+.....|++....... .|- .+..+|..... .. -++
T Consensus 129 ~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 208 (453)
T PRK06943 129 IALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARAL 208 (453)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHH
Confidence 9988652 12 36788888888885432221 111 12223322100 00 124
Q ss_pred HHHHhhcc---cCCcEEEecC-CCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceE
Q 013883 233 EELKSTIS---KNTRAILMNT-PHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTV 307 (434)
Q Consensus 233 ~~l~~~i~---~~~~~i~~~~-p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i 307 (434)
+.+++.+. ++..+|++.. .+...|. .++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 209 ~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PD--- 285 (453)
T PRK06943 209 ADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPD--- 285 (453)
T ss_pred HHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCC---
Confidence 66777774 3556666654 2666777 45777899999999999999999999999866665544444433344
Q ss_pred EEccCChhhcccc-ceeeeEEeChhhHHHHHHH------hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 308 TMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQA------HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 308 ~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
+-+++|.++ .| ..+|.+++++++.+.+... ....+++.++.+.+++.+.|+..++ +++.++.+++-+++
T Consensus 286 -ivt~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~--~~l~~~~~~~G~~l 361 (453)
T PRK06943 286 -FLCLSKGIS-GGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE--DDVLARNARKSARL 361 (453)
T ss_pred -eEeeehhhc-cCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHH
Confidence 556799999 89 4999999999998776421 1334777888888888888875321 12334444444455
Q ss_pred HHHhhhC----CCEeecCCeeEEEeeecCC-CCCC--CHHHHHHHHHHhcCeEEECC
Q 013883 381 VEGLNAV----GFKVFPSSGTYFVVVDHTP-FGHE--TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 381 ~~~L~~~----g~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~Ll~~~GV~v~pG 430 (434)
.+.|+++ ++.-+...|. ++-+.+.. .... ....+..++++ +||++.|.
T Consensus 362 ~~~L~~l~~~~~v~~vrG~Gl-~~gvel~~~~~~~~~~~~~i~~~~~~-~Gll~~~~ 416 (453)
T PRK06943 362 RAALAPLAAHPQVRHLRQRGT-IFAFDVALDGDAARTFSRRFFEAALE-RELLLRPI 416 (453)
T ss_pred HHHHHHHhcCCCEEeEecccc-EEEEEEccCCCcchHHHHHHHHHHHH-CCcEEEec
Confidence 5555443 2332334444 44444431 1100 12356666665 59999873
No 309
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=4.5e-14 Score=141.64 Aligned_cols=155 Identities=25% Similarity=0.345 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHH----HHHHHcCCEEEEEEcC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE----ATLSMAGAKIKCITLR 224 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~~ 224 (434)
.+|++.++++++ . .. .+++++| +.|+.+++.+++++||+|+++...|.+.. ..+...|++++.++ +
T Consensus 72 ~~le~~la~l~g----~---~~-~v~fsSG-~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~ 141 (437)
T PRK05613 72 EALENRIASLEG----G---VH-AVAFASG-QAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-N 141 (437)
T ss_pred HHHHHHHHHHhC----C---Ce-EEEeCCH-HHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-C
Confidence 456666666654 2 22 5666666 58888888888999999999999999864 44577899999887 2
Q ss_pred CCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCC
Q 013883 225 PPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYE 304 (434)
Q Consensus 225 ~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~ 304 (434)
+ . |++.+++++++++++|++.++.||+|.+.+ +++|+++|+++|+++|+|.++..... ...+ . .+
T Consensus 142 ~-~---d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~---~~p~-~----~G 206 (437)
T PRK05613 142 P-D---DPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL---VRPL-E----LG 206 (437)
T ss_pred C-C---CHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc---cChH-H----hC
Confidence 2 1 789999999999999999999999998884 77789999999999999999864221 1111 1 13
Q ss_pred ceEEEccCChhhccccceee-eEEe
Q 013883 305 RTVTMNSLGKTFSLTGWKIG-WAIA 328 (434)
Q Consensus 305 ~~i~i~S~SK~~g~~G~R~G-~~~~ 328 (434)
-.+++.|++|.++-.|--+| .++.
T Consensus 207 aDivv~S~~K~l~G~gd~~gG~vv~ 231 (437)
T PRK05613 207 ADVVVASLTKFYTGNGSGLGGVLID 231 (437)
T ss_pred CCEEEeeccceecCCCcceeEEEEe
Confidence 35889999999874444444 4443
No 310
>PRK07483 hypothetical protein; Provisional
Probab=99.62 E-value=2e-13 Score=137.68 Aligned_cols=309 Identities=17% Similarity=0.114 Sum_probs=181.4
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..|.- .+. .+|.+.+++.+++.+..+....... .+....+++.+...... ..+ .+++++++++|++.
T Consensus 30 ~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~-~~~~~~lae~L~~~~p~--~~~-~v~f~~sGsEAve~ 105 (443)
T PRK07483 30 KRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFT-TEPAEALADRLVAAAPA--GLE-HVYFVSGGSEAVEA 105 (443)
T ss_pred CEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccC-CHHHHHHHHHHHHhCCC--CCC-EEEEcCCcHHHHHH
Confidence 35788876622 222 3677889999988764211111111 34455677777654321 124 79999999999999
Q ss_pred HHHHccC-------CC-CeEEEcCCCchhHHHHHHHc-CC------------EEEEEEcCC--CCC--CC--------CH
Q 013883 186 TILGLIN-------PG-DEVILFAPFYDSYEATLSMA-GA------------KIKCITLRP--PDF--AI--------PI 232 (434)
Q Consensus 186 ~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~--~~~--~~--------d~ 232 (434)
+++.... +| .+|+.....|++........ |- .+..++... .+. .. .+
T Consensus 106 AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (443)
T PRK07483 106 ALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLA 185 (443)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHH
Confidence 9875431 33 56888888888864332221 11 112222110 000 00 02
Q ss_pred HHHHhhcc----cCCcEEEecCCCC-Cccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCce
Q 013883 233 EELKSTIS----KNTRAILMNTPHN-PTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERT 306 (434)
Q Consensus 233 ~~l~~~i~----~~~~~i~~~~p~N-PTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~ 306 (434)
+.+++++. ++..+|++...+. -.|. .++++.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PD-- 263 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPD-- 263 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCC--
Confidence 55666553 2455666654343 2354 55777899999999999999999999999876665444444433344
Q ss_pred EEEccCChhhccccc-eeeeEEeChhhHHHHHHH----hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 307 VTMNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQA----HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 307 i~i~S~SK~~g~~G~-R~G~~~~~~~~~~~l~~~----~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+-+++|.++ .|+ .+|.+++++++.+.+... ....+++.++.+..++.+.|+..++ +++.++.+++-++|+
T Consensus 264 --iv~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~--~~l~~~~~~~g~~l~ 338 (443)
T PRK07483 264 --LVTIAKGLG-AGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE--DGLLANVRARGEQLR 338 (443)
T ss_pred --eeeehhhhc-cCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHH
Confidence 566899998 886 999999999988776532 1235788888888888888875321 123344444444444
Q ss_pred HHhh----hCCCE-eecCCeeEEEeeecCCC-----CCC----CHHHHHHHHHHhcCeEEECC
Q 013883 382 EGLN----AVGFK-VFPSSGTYFVVVDHTPF-----GHE----TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 382 ~~L~----~~g~~-~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~Ll~~~GV~v~pG 430 (434)
+.|+ +.++. -+...|.| +-+.+... ..+ ....+.+.+++ .||++.|.
T Consensus 339 ~~L~~l~~~~~~i~~vRG~Glm-~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~ 399 (443)
T PRK07483 339 ARLRERLGQHPHVGDIRGRGLF-VGVELVADRATKAPFDPALKLHARIKREAMA-RGLMVYPM 399 (443)
T ss_pred HHHHHHHhcCCCeeeEeecccE-EEEEEeecccccCCCCchhhHHHHHHHHHHH-CCcEEEec
Confidence 4444 33322 22334443 33333211 000 12356666665 59999763
No 311
>PRK07036 hypothetical protein; Provisional
Probab=99.62 E-value=1.8e-13 Score=138.82 Aligned_cols=312 Identities=15% Similarity=0.123 Sum_probs=182.7
Q ss_pred cCCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...||+..|.- .+. .+|.+.+++.+++....+.........+.+..+++.+...... ..+ .+++++++++|++
T Consensus 50 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~--~~~-~v~f~~sGseAve 126 (466)
T PRK07036 50 GRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPG--DLN-HVFLTTGGSTAVD 126 (466)
T ss_pred CCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCC--CcC-EEEEeCCchHHHH
Confidence 335788866632 122 3677888898888763221111101134556677777654322 124 7999999999999
Q ss_pred HHHHHcc------C-C-CCeEEEcCCCchhHHHHHHHc-CC------------EEEEEEcCCC---CCCCC--------H
Q 013883 185 ATILGLI------N-P-GDEVILFAPFYDSYEATLSMA-GA------------KIKCITLRPP---DFAIP--------I 232 (434)
Q Consensus 185 ~~~~~l~------~-~-gd~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~---~~~~d--------~ 232 (434)
.+++... . + ..+|+.....|++....+... |- .+..++.... ..+.+ +
T Consensus 127 ~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 206 (466)
T PRK07036 127 SALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLV 206 (466)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHH
Confidence 9887642 1 2 257888888888865433222 11 1222322110 01111 2
Q ss_pred HHHHhhcc----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCcccc-CCCCCCCce
Q 013883 233 EELKSTIS----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIA-SLPGMYERT 306 (434)
Q Consensus 233 ~~l~~~i~----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~-~~~~~~~~~ 306 (434)
+.+++.+. ++..+|++...+...|.+ ++.+.+++|.++|++||+++|+||++.+|...|...... .+.-.+|
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PD-- 284 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPD-- 284 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCC--
Confidence 34444442 245666666556666774 567779999999999999999999999986555433333 2222344
Q ss_pred EEEccCChhhccccc-eeeeEEeChhhHHHHHHH-------hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 013883 307 VTMNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQA-------HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKA 378 (434)
Q Consensus 307 i~i~S~SK~~g~~G~-R~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 378 (434)
+.+++|.+| .|+ .+|.+++++++.+.+... ....+++.++++..++.+.|+..++ +++.++.+++-+
T Consensus 285 --ivt~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~--~~l~~~~~~~g~ 359 (466)
T PRK07036 285 --IITFAKGLT-SGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMER--EGLCEHVREVGP 359 (466)
T ss_pred --EEEEccccc-cCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHH
Confidence 557899998 784 899999999998876531 1223778888888888888875321 123444445555
Q ss_pred HHHHHhhh---CCCEeecCCeeEEEeeecCCCCC-----C----CHHHHHHHHHHhcCeEEECC
Q 013883 379 ILVEGLNA---VGFKVFPSSGTYFVVVDHTPFGH-----E----TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 379 ~l~~~L~~---~g~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~Ll~~~GV~v~pG 430 (434)
+|++.|++ .++......-|.++.+.+..... . ....+...+++ .||++.|.
T Consensus 360 ~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~ 422 (466)
T PRK07036 360 YFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQE-RGLLVRPL 422 (466)
T ss_pred HHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHH-CCcEEeec
Confidence 55555543 33322222333444454422110 0 12346666655 59999873
No 312
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.62 E-value=1.1e-13 Score=138.86 Aligned_cols=308 Identities=12% Similarity=0.113 Sum_probs=183.7
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...+|+..|. ..+. .+|.+.+++.+++.+..+...... ..+.+..+++.+...... ..+ .+++++++++|++
T Consensus 43 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~-~~~~~~~lae~L~~~~p~--~~~-~v~f~~sGseAve 118 (429)
T PRK06173 43 GRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGF-THEPAVELAQKLLEILPP--SLN-KIFFADSGSVAVE 118 (429)
T ss_pred CCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCcccccc-CCHHHHHHHHHHHhhCCC--CcC-EEEEeCCchHHHH
Confidence 34578886652 1121 357788888888876322111001 123445566666544321 224 7999999999999
Q ss_pred HHHHHccC-------CC-CeEEEcCCCchhHHHH-HHHcCC-------------EEEEEEcCCCCCC-----CCHHHHHh
Q 013883 185 ATILGLIN-------PG-DEVILFAPFYDSYEAT-LSMAGA-------------KIKCITLRPPDFA-----IPIEELKS 237 (434)
Q Consensus 185 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~-~~~~G~-------------~~~~v~~~~~~~~-----~d~~~l~~ 237 (434)
.+++.... +| .+|+.....|++.... +...|. .+..+|.....+. -+++.+++
T Consensus 119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~ 198 (429)
T PRK06173 119 VAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQD 198 (429)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHH
Confidence 98876531 33 5688888888884222 111110 1122222210111 13666777
Q ss_pred hcc---cCCcEEEecCC-CCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccC
Q 013883 238 TIS---KNTRAILMNTP-HNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSL 312 (434)
Q Consensus 238 ~i~---~~~~~i~~~~p-~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~ 312 (434)
.+. ++..+|++... +.-.|.. ++++.+++|.++|++||+++|+||++.+|...|.......+.-.+| +.+|
T Consensus 199 ~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD----iv~~ 274 (429)
T PRK06173 199 LLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPD----IMCI 274 (429)
T ss_pred HHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCC----EEEe
Confidence 774 34566666542 6667775 6778899999999999999999999988755554433333322333 3349
Q ss_pred Chhhccccc-eeeeEEeChhhHHHHHH-----HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh
Q 013883 313 GKTFSLTGW-KIGWAIAPPHLTWGVRQ-----AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA 386 (434)
Q Consensus 313 SK~~g~~G~-R~G~~~~~~~~~~~l~~-----~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~ 386 (434)
+|.++ .|+ .++.+++++++.+.+.. .....+++.+++...++.++|+..++ +..+++.+++-+.|++.|++
T Consensus 275 gK~l~-gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~ 351 (429)
T PRK06173 275 GKALT-GGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE--SPWQQNIQRIEAQLKQELAP 351 (429)
T ss_pred ehhhh-CCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH
Confidence 99998 784 78999999998877642 11223567778888888877764221 12355666666677777765
Q ss_pred C-CCEee---cCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 387 V-GFKVF---PSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 387 ~-g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+ ++..+ ... |+++-+.+... .....+++.|+++ ||++.+.
T Consensus 352 ~~~~~~v~~vRg~-Gl~~~iel~~~--~~~~~i~~~l~e~-Gi~v~~~ 395 (429)
T PRK06173 352 AAEFDSVAEVRVL-GAIGVVEMKEP--VNMATLQPRFVEH-GIWVRPF 395 (429)
T ss_pred hhcCCCeeeeecc-ceEEEEEeCCc--ccHHHHHHHHHHC-CeEEEec
Confidence 4 33322 223 43444444221 1345677777655 9999874
No 313
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.62 E-value=1.3e-13 Score=139.13 Aligned_cols=310 Identities=14% Similarity=0.140 Sum_probs=186.0
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|. -.+. .+|.+.+++.+++.+..+....... .+....+++.+.+..... .+ .+++++++++|++
T Consensus 48 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~-~~~~~~la~~L~~~~p~~--~~-~v~f~~sGseAve 123 (445)
T PRK09221 48 GRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMG-HPLAFELAERLAELAPGG--LD-HVFFTNSGSESVD 123 (445)
T ss_pred CCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccC-CHHHHHHHHHHHHhCCCC--CC-EEEEeCCcHHHHH
Confidence 34678887662 2222 4677888898888763221111112 234455666666543221 24 7999999999999
Q ss_pred HHHHHccC-------C-CCeEEEcCCCchhHHHHHHHc-C------------CEEEEEEcCC--CC--CCC--------C
Q 013883 185 ATILGLIN-------P-GDEVILFAPFYDSYEATLSMA-G------------AKIKCITLRP--PD--FAI--------P 231 (434)
Q Consensus 185 ~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~-G------------~~~~~v~~~~--~~--~~~--------d 231 (434)
.+++.... + ..+|+.....|++........ | ..+..+|... .. +.. .
T Consensus 124 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (445)
T PRK09221 124 TALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAEL 203 (445)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHH
Confidence 98875431 1 257888888888754332211 1 1122233211 00 110 1
Q ss_pred HHHHHhhcc----cCCcEEEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCce
Q 013883 232 IEELKSTIS----KNTRAILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERT 306 (434)
Q Consensus 232 ~~~l~~~i~----~~~~~i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~ 306 (434)
++.+++.+. ++..+|++.......|... +.+.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 204 ~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PD-- 281 (445)
T PRK09221 204 ADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPD-- 281 (445)
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCC--
Confidence 356666664 2455666665576778754 566799999999999999999999998765555443333332344
Q ss_pred EEEccCChhhcccc-ceeeeEEeChhhHHHHHHH-------hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 013883 307 VTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQA-------HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKA 378 (434)
Q Consensus 307 i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 378 (434)
+.+++|.++ .| ..+|.+++++++.+.+... ....+++.+++...++.+.|+..++ +.+.++.+++.+
T Consensus 282 --i~~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~--~~l~~~~~~~g~ 356 (445)
T PRK09221 282 --IITFAKGLT-NGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE--EDLFERAAELAP 356 (445)
T ss_pred --EEEeccccc-cCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHH
Confidence 558999998 66 6799999999988766421 1234777788888788777765321 134566677777
Q ss_pred HHHHHhhhC-CCEe---ecCCeeEEEeeecCCCCC---CCHHHHHHHHHHhcCeEEECC
Q 013883 379 ILVEGLNAV-GFKV---FPSSGTYFVVVDHTPFGH---ETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 379 ~l~~~L~~~-g~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~Ll~~~GV~v~pG 430 (434)
++++.|+++ +... +...| .+.-+.+.+... ....++.++++++ ||.+.++
T Consensus 357 ~l~~~l~~l~~~~~v~~vrg~G-l~~~v~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~ 413 (445)
T PRK09221 357 YFEDAVHSLKGLPHVIDIRNIG-LVAGIELAPRPGAPGARGYEAFMKCFEK-GLLVRYT 413 (445)
T ss_pred HHHHHHHhhccCCCEEEEecCc-eEEEEEEecccccccchHHHHHHHHHHC-CeEEeec
Confidence 777777664 2221 22233 334444432111 1134677777654 9998764
No 314
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.62 E-value=2.2e-13 Score=137.43 Aligned_cols=310 Identities=14% Similarity=0.102 Sum_probs=184.1
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...+||..|. -.+. .+|.+.+++.+++++..+....... .+.+..+++.+.+.... ..+ .+++++++++|++
T Consensus 45 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~-~~~~~~la~~l~~~~p~--~~~-~v~f~~sGseA~e 120 (442)
T PRK13360 45 GRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMG-HPKAFELANRIAEIAPG--GLN-HVFFTNSGSESVD 120 (442)
T ss_pred CCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcC-CHHHHHHHHHHHHhCCC--CCC-EEEEeCCcHHHHH
Confidence 33578886662 2222 3677888998888763221111111 24455666666654321 124 7999999999999
Q ss_pred HHHHHccC-------C-CCeEEEcCCCchhHHHHHH-HcC------------CEEEEEEcCCC--C--CCC--------C
Q 013883 185 ATILGLIN-------P-GDEVILFAPFYDSYEATLS-MAG------------AKIKCITLRPP--D--FAI--------P 231 (434)
Q Consensus 185 ~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~-~~G------------~~~~~v~~~~~--~--~~~--------d 231 (434)
.+++.... + ..+|+.....|++...... ..| ..+..+|.... . +.. .
T Consensus 121 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 200 (442)
T PRK13360 121 TALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAEL 200 (442)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHH
Confidence 99875431 2 3578888888888543221 111 11223333210 0 111 1
Q ss_pred HHHHHhhcc----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCce
Q 013883 232 IEELKSTIS----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERT 306 (434)
Q Consensus 232 ~~~l~~~i~----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~ 306 (434)
++.+++.+. ++..+|++.......|.. ++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 201 ~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD-- 278 (442)
T PRK13360 201 ADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPD-- 278 (442)
T ss_pred HHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCc--
Confidence 456777764 234556665556667775 4677799999999999999999999988765554433333322334
Q ss_pred EEEccCChhhcccc-ceeeeEEeChhhHHHHHHH-------hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 013883 307 VTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQA-------HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKA 378 (434)
Q Consensus 307 i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 378 (434)
+.+|+|.++ .| +.+|.+++++++.+.+... ....+++.+++...++.++|+..++ +.+.++.+++-+
T Consensus 279 --ivt~gK~l~-gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~--~~l~~~~~~~g~ 353 (442)
T PRK13360 279 --LLTCAKGLT-NGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER--EGLLTRAARLAP 353 (442)
T ss_pred --eeeeeeccc-cCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHH
Confidence 458899998 67 6899999999988766431 1234777888888888888775321 134555666666
Q ss_pred HHHHHhhhCC-CEe---ecCCeeEEEeeecCCCC---CCCHHHHHHHHHHhcCeEEECC
Q 013883 379 ILVEGLNAVG-FKV---FPSSGTYFVVVDHTPFG---HETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 379 ~l~~~L~~~g-~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
++++.|++++ ... +...|. ++-+.+.+.. .....++..++++ +||++.++
T Consensus 354 ~l~~~l~~l~~~~~v~~vrG~Gl-~~~~~l~~~~~~~~~~~~~~~~~l~~-~Gvl~~~~ 410 (442)
T PRK13360 354 YWEDALHSLRDAPHVIDIRNLGL-VGAVELAPRDGKPGKRAYEVFLKCFE-KGLMIRYT 410 (442)
T ss_pred HHHHHHHHhhcCCCeeeeeccce-EEEEEEecCCCCcchhHHHHHHHHHH-CCcEEEec
Confidence 6666666542 211 222233 3333332211 1123467777765 49998764
No 315
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.61 E-value=1.2e-15 Score=144.65 Aligned_cols=252 Identities=19% Similarity=0.180 Sum_probs=165.0
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCC
Q 013883 123 GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAP 202 (434)
Q Consensus 123 ~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p 202 (434)
+.+.+.+++.++. .+...|.......+|++.++++++ .+ ..+++.+++.+...+++.+++|++.|++.++
T Consensus 7 ~~~~m~~a~~~a~-~gd~~Yg~D~~~~~l~~~i~~l~g--------~e-~a~f~~sGT~An~~al~~~~~~~~~vi~~~~ 76 (290)
T PF01212_consen 7 PTPAMLEAMAAAN-VGDDAYGEDPTTARLEERIAELFG--------KE-AALFVPSGTMANQLALRAHLRPGESVICADT 76 (290)
T ss_dssp S-HHEEHHHHHTT-SB-CCTTSSHHHHHHHHHHHHHHT--------SS-EEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred CCHHHHHHHHccc-cCCcccCCChhHHHHHHHHHHHcC--------CC-EEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence 6677777774443 333468777667788888888877 44 5678888999999999999999999999999
Q ss_pred CchhHH---HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcEEEecCCCCCc-ccCCCHHHHHHHHHHHH
Q 013883 203 FYDSYE---ATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRAILMNTPHNPT-GKMFTREELNVIASLCI 272 (434)
Q Consensus 203 ~y~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~i~~~~p~NPT-G~~~~~e~l~~i~~la~ 272 (434)
.|.... ......|++++.++..+ ++.+|+++|++.+.. ++++|.+++|+|-. |.+++.+++++|.++|+
T Consensus 77 aHi~~~E~ga~~~~~G~~~~~l~~~~-~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~ 155 (290)
T PF01212_consen 77 AHIHFDETGAIEELSGAKLIPLPSDD-DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAR 155 (290)
T ss_dssp EHHHHSSTTHHHHHTTCEEEEEBECT-GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHH
T ss_pred ceeeeeccchhhHhcCcEEEECCCcc-cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHH
Confidence 766432 22356899999998773 388999999999865 46889999998864 88999999999999999
Q ss_pred HcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC---ch
Q 013883 273 ENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT---ST 349 (434)
Q Consensus 273 ~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~---~~ 349 (434)
+||+.++.|.+--.-........+..+.. .-.++..|++|++|+++ -+.++++++++++....+....... ..
T Consensus 156 ~~gl~lhmDGARl~~a~~~~~~~~~e~~~--~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~ 231 (290)
T PF01212_consen 156 EHGLPLHMDGARLANAAAALGVSLAEIAA--GADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQRKRLGGGMRQAGV 231 (290)
T ss_dssp HHT-EEEEEETTHHHHHCHHHHHHHHHHT--TSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHHHHHHTHHHHHTTH
T ss_pred hCceEEEEehhhHHHhhhcccccHHHHhh--hCCEEEEEEEccccccc--ceEEEechHHHHHHHHHHHHhccCeeecce
Confidence 99999999998432111000111222211 12256679999998766 5788889997765443333221111 11
Q ss_pred HHH-----HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeec
Q 013883 350 PMQ-----WAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFP 393 (434)
Q Consensus 350 ~~q-----~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 393 (434)
+.. .++...++. +++ ...+..++.+.+.+.|+.+|..+..
T Consensus 232 ~~a~~~~~~~~l~~l~~---~~~-~~~~~~~~A~~La~~l~~~~~~~~~ 276 (290)
T PF01212_consen 232 LAAAELYQFAALRALEL---WLE-RARHANAMAKRLAAGLEALGGVLPR 276 (290)
T ss_dssp HHHHHHHHHHHHCHEEC---SHH-HHHCHHHHHHCHHHCHHEECEEEET
T ss_pred eeeechhhHHHHHHHHh---hHH-HHHHHHHHHHHHHHHHHHCCCcccC
Confidence 111 122222332 323 3455566778888888888766543
No 316
>PRK07480 putative aminotransferase; Validated
Probab=99.61 E-value=1.5e-13 Score=139.09 Aligned_cols=246 Identities=16% Similarity=0.120 Sum_probs=154.2
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...||+..|. ..+. .+|.+.+++++++.+..+.........+.+..+++.+.+..+. ..+ .+++++++++|++
T Consensus 49 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~--~~~-~v~f~~SGseA~e 125 (456)
T PRK07480 49 GNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPP--GFN-HVFFTNSGSEAND 125 (456)
T ss_pred CCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCC--CcC-EEEEeCCcHHHHH
Confidence 33578886662 2222 3677888998888764221111011235566677777654432 124 7999999999999
Q ss_pred HHHHHccC-------CC-CeEEEcCCCchhHHHHHHH-cCCE------------EEEEEcCC--C-CCCCC--------H
Q 013883 185 ATILGLIN-------PG-DEVILFAPFYDSYEATLSM-AGAK------------IKCITLRP--P-DFAIP--------I 232 (434)
Q Consensus 185 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~-~G~~------------~~~v~~~~--~-~~~~d--------~ 232 (434)
.+++.... +| .+|+...-.|++....... .|.. +..++... . ....+ +
T Consensus 126 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 205 (456)
T PRK07480 126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAA 205 (456)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHH
Confidence 99875531 33 4688888888875422211 1111 11122110 0 00011 2
Q ss_pred HHHHhhcc----cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceE
Q 013883 233 EELKSTIS----KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTV 307 (434)
Q Consensus 233 ~~l~~~i~----~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i 307 (434)
+.+++.+. ++..+|++...+.-.|.+ ++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PD--- 282 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPD--- 282 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCC---
Confidence 55554442 245667776556666774 5666799999999999999999999999865655444444433344
Q ss_pred EEccCChhhccccc-eeeeEEeChhhHHHHHH----HhhccccCCchHHHHHHHHHHhC
Q 013883 308 TMNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQ----AHSFLTFATSTPMQWAATAALRA 361 (434)
Q Consensus 308 ~i~S~SK~~g~~G~-R~G~~~~~~~~~~~l~~----~~~~~~~~~~~~~q~a~~~~L~~ 361 (434)
+.+|+|.++ .|+ .+|.+++++++.+.+.. .....+++.++++.+++.+.|+.
T Consensus 283 -iv~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~ 339 (456)
T PRK07480 283 -LMTIAKGLT-SGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRI 339 (456)
T ss_pred -eeeeehhhc-cCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHH
Confidence 567899998 785 89999999998877631 12335788899998888888875
No 317
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=4.1e-13 Score=136.15 Aligned_cols=308 Identities=10% Similarity=0.093 Sum_probs=185.7
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...+||..|.- .+. .+|.+.+++.+++.+..+...... ..+.+..+++.+...... ..+ .+++++++++|++.
T Consensus 47 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~-~~~~~~~lae~L~~~~p~--~~~-~v~f~~sGsEAve~ 122 (466)
T PRK07030 47 KRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGF-SHEPVIELSERLVKITPP--GLS-RCFYADNGSSAIEV 122 (466)
T ss_pred CEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcccccc-CCHHHHHHHHHHHHhCCC--CcC-EEEEeCCcHHHHHH
Confidence 35788866632 122 357788889888876422221111 134556667777654321 224 79999999999999
Q ss_pred HHHHccC-------C-CCeEEEcCCCchhHHHHHHHc-CC------------EEEEEEcCCC---CCCC--------CHH
Q 013883 186 TILGLIN-------P-GDEVILFAPFYDSYEATLSMA-GA------------KIKCITLRPP---DFAI--------PIE 233 (434)
Q Consensus 186 ~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~---~~~~--------d~~ 233 (434)
+++.... + ..+|+.....|++........ |. .+..+|.... ..+. +++
T Consensus 123 AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~ 202 (466)
T PRK07030 123 ALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFA 202 (466)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHH
Confidence 9876521 2 356888888888865433322 21 1222332210 0111 245
Q ss_pred HHHhhcc---cCCcEEEecC-CCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEE
Q 013883 234 ELKSTIS---KNTRAILMNT-PHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVT 308 (434)
Q Consensus 234 ~l~~~i~---~~~~~i~~~~-p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~ 308 (434)
.+++.+. ++..+|++.. .+.-.|. .++++.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 203 ~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PD---- 278 (466)
T PRK07030 203 HMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPD---- 278 (466)
T ss_pred HHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCC----
Confidence 6677664 2455666654 2555677 55677799999999999999999999999876665444444433344
Q ss_pred EccCChhhccccc-eeeeEEeChhhHHHHHH-------HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 309 MNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQ-------AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 309 i~S~SK~~g~~G~-R~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
+-+++|.++ .|+ .+|.+++++++.+.+.. .....+++.++.+.+++.+.|+..++ +++.++.+++-+++
T Consensus 279 iv~~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~G~~l 355 (466)
T PRK07030 279 FLCLSKALT-GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQ--DNVIENNRALARRM 355 (466)
T ss_pred EEeeehhcc-CCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHH
Confidence 556799999 895 99999999999877642 12335778888888888888875321 12344445555555
Q ss_pred HHHhhhC---CC-EeecCCeeEEEeeecCCCCC-----C-C---HHHHHHHHHHhcCeEEEC
Q 013883 381 VEGLNAV---GF-KVFPSSGTYFVVVDHTPFGH-----E-T---DIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 381 ~~~L~~~---g~-~~~~~~~~~~~~~~~~~~~~-----~-~---~~~~~~~Ll~~~GV~v~p 429 (434)
.+.|+++ .. .-+...|. ++-+.+..... . + ...+..++++ +||.+.|
T Consensus 356 ~~~L~~l~~~~~v~~vrG~Gl-~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~ 415 (466)
T PRK07030 356 AEATAHLADHPHVAEVRQTGM-ILAIEMVQDKASKTPYPWQERRGLKVYQHALE-RGALLRP 415 (466)
T ss_pred HHHHHHHhcCCCEEEeEecee-EEEEEeccCccccccCcchhHHHHHHHHHHHH-CCeEEEe
Confidence 5555443 22 12233444 44444421110 0 0 1356666665 5999987
No 318
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=4.6e-13 Score=134.31 Aligned_cols=306 Identities=15% Similarity=0.137 Sum_probs=182.1
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..|.- .+. .+|.+.+++.+++++..+....... .+....+++.+.+..+.. .+ .+++++++++|++.
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~-~~~~~~lae~L~~~~p~~--~~-~v~f~~SGseA~e~ 115 (422)
T PRK05630 40 STVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLT-HEPAIKLTRKLLNLTDNG--LD-HVFYSDSGSVSVEV 115 (422)
T ss_pred CEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcC-CHHHHHHHHHHHhhCCCC--cC-EEEEeCCcHHHHHH
Confidence 35788866622 222 3678888998888764321111111 233455666665443221 24 79999999999999
Q ss_pred HHHHccC-------CC-CeEEEcCCCchhHHHHHHHc-CC-------------EEEEEEcCCCCCCCC-------HHHHH
Q 013883 186 TILGLIN-------PG-DEVILFAPFYDSYEATLSMA-GA-------------KIKCITLRPPDFAIP-------IEELK 236 (434)
Q Consensus 186 ~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~~~~~d-------~~~l~ 236 (434)
+++.... ++ .+|+.....|++........ +. .+..+|... ....+ ++.++
T Consensus 116 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~ 194 (422)
T PRK05630 116 AIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPP-VRGSSPQEISEYLRSLE 194 (422)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCc-ccCCChHHHHHHHHHHH
Confidence 8876431 23 57888888888854333221 21 112233221 01111 24455
Q ss_pred hhcccCCcEEEecCC-CCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCCh
Q 013883 237 STISKNTRAILMNTP-HNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGK 314 (434)
Q Consensus 237 ~~i~~~~~~i~~~~p-~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK 314 (434)
+.+.++..+|++... +.-.|.. ++.+.+++|.++|++||+++|+||++.++...|.......+.-.+| +.+++|
T Consensus 195 ~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD----i~t~gK 270 (422)
T PRK05630 195 LLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPD----IMCVGK 270 (422)
T ss_pred HHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCC----eeeeec
Confidence 555556777777652 6667774 5677799999999999999999999988865554433333322334 348899
Q ss_pred hhcccc-ceeeeEEeChhhHHHHHHH------hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 315 TFSLTG-WKIGWAIAPPHLTWGVRQA------HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 315 ~~g~~G-~R~G~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
.++ .| ..+|++++++++.+.+... ....+++.++....++.++|+..++ +...++.+++-+++.+.|+++
T Consensus 271 ~l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~--~~~~~~~~~~g~~l~~~L~~l 347 (422)
T PRK05630 271 ALT-GGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET--GMWRKQVKRIEAELIAGLSPL 347 (422)
T ss_pred hhh-cCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHh
Confidence 997 67 4899999999998876431 1235778888888888887775321 122334444455555555432
Q ss_pred ----CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 388 ----GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 388 ----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
.+.-+...|. ++-+.+... .+...+.+.+++ +||++.+.
T Consensus 348 ~~~~~v~~vRg~Gl-~~~ie~~~~--~~~~~~~~~~~~-~Gl~~~~~ 390 (422)
T PRK05630 348 AHLPGVADVRVLGA-IGVVEMEQP--VDMEEATQAAVD-HGVWLRPF 390 (422)
T ss_pred hcCCCeeeeecccc-EEEEEECCc--ccHHHHHHHHHH-CCeEEEec
Confidence 1222233343 444444221 124567777765 49998763
No 319
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=3.2e-13 Score=136.89 Aligned_cols=247 Identities=11% Similarity=0.075 Sum_probs=157.7
Q ss_pred cCCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCC---CCCCCcEEEcCChHH
Q 013883 108 KHGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLE---VDPEKEVTVTSGCTE 181 (434)
Q Consensus 108 ~~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~---~~~~~~i~~t~G~~~ 181 (434)
+...||+..|.- .+. .+|.+.+++.+++++..+....... .+.+..+++.+.+..... -+.+ .+++++++++
T Consensus 63 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~-~~~~~~lae~L~~~~p~~~~~~~~~-~v~f~~sGSE 140 (472)
T PRK08742 63 GRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFT-HEPAVQLAEQLLAIAPRQDGRAPLS-KVFYADNGSA 140 (472)
T ss_pred CCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccC-CHHHHHHHHHHHHhCCCcccCCCCC-EEEEeCCchH
Confidence 346788876621 122 3677888888887653221111111 244566777766544211 1124 7999999999
Q ss_pred HHHHHHHHccC-------C-CCeEEEcCCCchhHHHHHHHcCC-------------EEEEEEcCCC---CCCC-------
Q 013883 182 AIAATILGLIN-------P-GDEVILFAPFYDSYEATLSMAGA-------------KIKCITLRPP---DFAI------- 230 (434)
Q Consensus 182 ai~~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~---~~~~------- 230 (434)
|++.+++.... + ..+|+.....|++........+. .+..+|.... ..+.
T Consensus 141 AvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~ 220 (472)
T PRK08742 141 GVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYAL 220 (472)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHH
Confidence 99999876531 2 36788888888886544333221 1222332210 0111
Q ss_pred -CHHHHHhhcc---cCCcEEEecC-CCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCC
Q 013883 231 -PIEELKSTIS---KNTRAILMNT-PHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYE 304 (434)
Q Consensus 231 -d~~~l~~~i~---~~~~~i~~~~-p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~ 304 (434)
+++.+++.+. .+..+|++.. .++-.|. .++++.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 221 ~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PD 300 (472)
T PRK08742 221 QAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPD 300 (472)
T ss_pred HHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCC
Confidence 2566666664 2455666654 2666677 55777899999999999999999999999877665554444433344
Q ss_pred ceEEEccCChhhccccc-eeeeEEeChhhHHHHHHH------hhccccCCchHHHHHHHHHHhC
Q 013883 305 RTVTMNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQA------HSFLTFATSTPMQWAATAALRA 361 (434)
Q Consensus 305 ~~i~i~S~SK~~g~~G~-R~G~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~a~~~~L~~ 361 (434)
+-+++|.+| .|+ .+|.+++++++.+.+... ....+++.++.+.+++.+.|+.
T Consensus 301 ----iv~~gKgl~-gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~ 359 (472)
T PRK08742 301 ----LLCLSKGLT-GGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDI 359 (472)
T ss_pred ----EEEEccccc-CCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHH
Confidence 556799998 885 899999999988766421 1234777888888888888775
No 320
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.60 E-value=7.1e-13 Score=121.09 Aligned_cols=289 Identities=15% Similarity=0.179 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCC-c
Q 013883 126 FVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPF-Y 204 (434)
Q Consensus 126 ~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~-y 204 (434)
.+-+.+.+++......|..+. ...+.+.+-+-++..+... .....++...+..+++.++..++.|||.|++..-. |
T Consensus 27 nl~~~V~~A~~~~~lgh~sPe-~~qIm~~v~egikyVFkT~--n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~w 103 (385)
T KOG2862|consen 27 NLSGRVQEAMSRPSLGHMSPE-FVQIMDEVLEGIKYVFKTA--NAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTW 103 (385)
T ss_pred CCCHHHHHhhcCCccccCCHH-HHHHHHHHHHHHHHHhccC--CCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechH
Confidence 344456666666555555532 2334444443333333221 22245666667899999999999999999987654 4
Q ss_pred hh-HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 205 DS-YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 205 ~~-~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
.. ..+..+.+|++|..|+.+. +....++.+.+.+.+ +++++++++-...||+..+ -++.+.++|++|+.++++|.
T Consensus 104 g~ra~D~~~r~ga~V~~v~~~~-G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~--~~~~~g~lc~k~~~lllVD~ 180 (385)
T KOG2862|consen 104 GQRAADCARRYGAEVDVVEADI-GQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQD--LLAISGELCHKHEALLLVDT 180 (385)
T ss_pred HHHHHHHHHhhCceeeEEecCc-ccCccHHHHHHHHHhcCCceEEEEecCccccccch--HHHHHHHHhhcCCeEEEEec
Confidence 43 4678899999999998775 677899999999987 6899999999999999864 35667889999999999999
Q ss_pred cCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhh---------------------
Q 013883 283 VYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS--------------------- 341 (434)
Q Consensus 283 ay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~--------------------- 341 (434)
+-+-. +... .++++.- .+....--|.+|.| ..++.+..++...++++..+.
T Consensus 181 VaSlg---gt~F---~mDewgV-DvaytgSQKaL~aP-~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e 252 (385)
T KOG2862|consen 181 VASLG---GTEF---EMDEWGV-DVAYTGSQKALGAP-AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGE 252 (385)
T ss_pred hhhcC---Cccc---eehhhcc-cEEEecchhhcCCC-CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCc
Confidence 87642 2221 1222222 23333334888753 236677777777777654433
Q ss_pred --ccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCC---eeEEE-eeecCCCCCCCHHH
Q 013883 342 --FLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSS---GTYFV-VVDHTPFGHETDIA 414 (434)
Q Consensus 342 --~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~-~~~~~~~~~~~~~~ 414 (434)
....+++....+...++|.. .++.+++..++.+++.+.++..|+++|++..... -.+-+ -+. .|++. |..+
T Consensus 253 ~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~-vp~gv-Dw~d 330 (385)
T KOG2862|consen 253 PRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVK-VPYGV-DWKD 330 (385)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeee-cCCCC-CHHH
Confidence 11244566666666677765 3677999999999999999999999987653211 11111 222 24565 6789
Q ss_pred HHHHHHHhcCeEEECC
Q 013883 415 FCEYLIKEVGVVAIPT 430 (434)
Q Consensus 415 ~~~~Ll~~~GV~v~pG 430 (434)
++.++..+++|.+.-|
T Consensus 331 Vv~~~~~~~~vei~gg 346 (385)
T KOG2862|consen 331 VVAYAMSHYVVEIGGG 346 (385)
T ss_pred HHHHHHHhcCEEeccc
Confidence 9999988877776554
No 321
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.60 E-value=2.3e-13 Score=136.70 Aligned_cols=197 Identities=16% Similarity=0.172 Sum_probs=134.5
Q ss_pred CcHHHHHHHHHHHHcCC-CCCCCC---CC--cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCe
Q 013883 123 GPDFVKDAAIQAIRDGK-NQYARG---HG--VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDE 196 (434)
Q Consensus 123 ~~~~v~~~~~~~~~~~~-~~Y~~~---~G--~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~ 196 (434)
.++.+.+++.+.+.... ..|.-. .| +..+++.++++++ .+ ..+++++++.|+.+++. .+.+||+
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g--------ae-~alvv~sg~aAi~l~l~-~l~~Gde 162 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG--------AE-DALVVNNNAAAVLLALN-TLAKGKE 162 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC--------CC-cEEEECCHHHHHHHHHH-HhCCcCE
Confidence 46788888888776521 122211 11 2467777777765 33 34556667788888885 4689999
Q ss_pred EEEcCCCchh------HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCc--cc--CCCHHHHHH
Q 013883 197 VILFAPFYDS------YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPT--GK--MFTREELNV 266 (434)
Q Consensus 197 Vlv~~p~y~~------~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPT--G~--~~~~e~l~~ 266 (434)
|++.+..|.. +...+...|++++.++.+. ..|+++++++++++|++|++.+++|++ |. .. ++++
T Consensus 163 VIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~---~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~---dl~~ 236 (454)
T TIGR00474 163 VIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN---RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEV---SIAE 236 (454)
T ss_pred EEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC---CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCC---CHHH
Confidence 9998876432 2345677899999887642 347999999999999999999999996 53 44 5777
Q ss_pred HHHHHHHcCcEEEEcCcCCccc----cCC-CCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHH
Q 013883 267 IASLCIENDVLVFSDEVYDKLA----FEM-DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQ 338 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~----~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~ 338 (434)
|+++|++||+++|+|.....+. ++- ..+.+.... ..+-.+++.|..|.+| |...|++++++++++++++
T Consensus 237 I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~-~~GaDiv~fSg~K~Lg--Gp~~G~i~g~~~~i~~l~~ 310 (454)
T TIGR00474 237 LVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVI-AAGVDLVTFSGDKLLG--GPQAGIIVGKKELIERLKK 310 (454)
T ss_pred HHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHh-HcCCCEEEecCccccC--CCeEEEEEECHHHHHhhhh
Confidence 9999999999999998643321 000 011111111 1234588899999986 4458999999988876653
No 322
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.59 E-value=5.2e-13 Score=135.26 Aligned_cols=314 Identities=12% Similarity=0.025 Sum_probs=178.8
Q ss_pred cCCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|+-. +. .+|.+.+++.+++......+... -..+.+..+++.+.+..+......+.+++++++++|++
T Consensus 57 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~-~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve 135 (459)
T PRK06931 57 GNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLD-LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVE 135 (459)
T ss_pred CCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccc-cCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHH
Confidence 3457888776322 22 36778888888876532211111 12355666777776544211111113566688899999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHHcC-------------CEEEEEEcCCC-C--CC----CCHHHH----Hhh
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSMAG-------------AKIKCITLRPP-D--FA----IPIEEL----KST 238 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G-------------~~~~~v~~~~~-~--~~----~d~~~l----~~~ 238 (434)
.+++... ...++|+...-.|++......... ..+..+|.... . ++ -+.+.+ ++.
T Consensus 136 ~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (459)
T PRK06931 136 AAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENF 215 (459)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHH
Confidence 9887643 334678888888988765544321 11223333210 0 11 122222 233
Q ss_pred cc------cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEcc
Q 013883 239 IS------KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNS 311 (434)
Q Consensus 239 i~------~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S 311 (434)
+. ++..+|++...+.-.|.+ ++.+.+++|.++|++||+++|+||++.+|...|.......+.-.+| +.+
T Consensus 216 ~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PD----ivt 291 (459)
T PRK06931 216 IEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPD----IIV 291 (459)
T ss_pred HHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCC----EEE
Confidence 32 135666665445555764 5677899999999999999999999999866665444444433344 667
Q ss_pred CChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 013883 312 LGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGF 389 (434)
Q Consensus 312 ~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~ 389 (434)
++|.+| .|+.+|.+++++++ +.+.......+++.++++.+++.+.|+.. ++.+++..+.-...++.|.+..++.++
T Consensus 292 ~gK~l~-gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~ 369 (459)
T PRK06931 292 MSKAVG-GGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPC 369 (459)
T ss_pred eccccc-CCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 899999 89999988887663 44433334457888899888888888742 122233333223333333333333443
Q ss_pred Ee-ecCCeeEEEeeecCCCC--------C----CCHHHHHHHHHHhcCeEEECC
Q 013883 390 KV-FPSSGTYFVVVDHTPFG--------H----ETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 390 ~~-~~~~~~~~~~~~~~~~~--------~----~~~~~~~~~Ll~~~GV~v~pG 430 (434)
.. +...|. ++-+.+.+.. . .....+...+++ .||++.|+
T Consensus 370 i~~vrG~Gl-m~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~ 421 (459)
T PRK06931 370 IGNVRGRGL-MIGIEIVDERQPADAMGSYPADGELAAAIQKACFE-NGLLLERG 421 (459)
T ss_pred eEeEecCce-EEEEEEccCcccccccccCCccHHHHHHHHHHHHH-CCcEEeec
Confidence 22 233444 4444442110 0 012345555654 59999874
No 323
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.59 E-value=2.5e-14 Score=133.40 Aligned_cols=295 Identities=18% Similarity=0.253 Sum_probs=170.5
Q ss_pred eEeCCCCCCCCCcHHHHHHHHHHHH-cCC--CCCCC-----CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 112 INLGQGFPNFDGPDFVKDAAIQAIR-DGK--NQYAR-----GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 112 i~l~~g~p~~~~~~~v~~~~~~~~~-~~~--~~Y~~-----~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+|+..|.|.+-.+=|.......++- .++ ..|.. ..-.++|.+.|.++... -|-.+..++.|++++|+++++
T Consensus 1 ~d~d~GDP~~~E~yW~~~~~~~avvi~gw~rMSY~~~~~~~~f~s~eL~~~Ir~LH~~-VGNAvt~gr~IV~GtGsTQL~ 79 (363)
T PF04864_consen 1 ADADSGDPTFFEPYWRRHGDSSAVVIPGWHRMSYFSDSSNGWFISPELERQIRRLHRV-VGNAVTDGRYIVFGTGSTQLF 79 (363)
T ss_dssp EEESS---GGGHHHHCCTHHHH-EEE-TTTT-SSSS-TTSSTTS-HHHHHHHHHHHHH-H-SB--TTSEEEEECHHHHHH
T ss_pred CCcCCCCchhhHHHHHhcCcceeEEEeccccceeEEecCCceeccHHHHHHHHHHHHH-hccccccCcEEEEcCCHHHHH
Confidence 4666777664444444333333321 122 12322 12246888888776654 454555666999999999999
Q ss_pred HHHHHHccCC----C--CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEE-EecCCCCCcc
Q 013883 184 AATILGLINP----G--DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAI-LMNTPHNPTG 256 (434)
Q Consensus 184 ~~~~~~l~~~----g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i-~~~~p~NPTG 256 (434)
.+++.+|... + -.|+...|.|+.|....+.+.-......-+...+ .+. ......| ++++||||.|
T Consensus 80 ~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~Gda~~~-------~~~-~~~~~~IElVTSPNNPDG 151 (363)
T PF04864_consen 80 NAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAGDASNF-------KNS-DNPSPYIELVTSPNNPDG 151 (363)
T ss_dssp HHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEEECCCG-------TT--S-CCGEEEEEESS-TTT-
T ss_pred HHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccccccHHhh-------ccC-CCCCCeEEEEeCCCCCcc
Confidence 9999998533 1 3588999999999988665543333322222122 111 1123455 7899999999
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWG 335 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~ 335 (434)
..- +.+ ++.-+..+|.|-||..-.|. ++.. ..|..|++.|+||.-|.+|-|+||.+.+ +++..+
T Consensus 152 ~lr-----~~V---~~g~~~k~I~D~AYYWPhyT----pI~~---~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~k 216 (363)
T PF04864_consen 152 QLR-----EAV---LNGSSGKVIHDLAYYWPHYT----PITA---PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKK 216 (363)
T ss_dssp ----------S---STTTEEEEEEE-TT-STTTS-------S----B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHH
T ss_pred ccc-----chh---cCCCCcceeeeeeeeccccc----ccCC---CCCCceEEEEEecccCccccccceeeecCHHHHHH
Confidence 642 223 34557778999999985443 2222 2466799999999999999999999997 566677
Q ss_pred HHHHhhccccCCchHHHHHHHHHHhCC-----h-----HHHHHHHHHHHHHHHHHHHHhhhCC-CEee--cC--------
Q 013883 336 VRQAHSFLTFATSTPMQWAATAALRAP-----E-----TYYEELKRDYSAKKAILVEGLNAVG-FKVF--PS-------- 394 (434)
Q Consensus 336 l~~~~~~~~~~~~~~~q~a~~~~L~~~-----~-----~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~--~~-------- 394 (434)
+.......+.+++.-.|.-++.+|+.- . +..+--.+.+++|-+.|++.+.+-+ +.+. ++
T Consensus 217 M~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~ 296 (363)
T PF04864_consen 217 MTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKR 296 (363)
T ss_dssp HHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTC
T ss_pred HHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhcccccc
Confidence 777777778999999998888887641 1 2445556777777788888876542 2221 11
Q ss_pred ---CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 395 ---SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 395 ---~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
...-|.|+++...+. +-|..+++++||.-+.|..|.
T Consensus 297 ~~~psPafAWlkCe~eed----~DC~~~l~~~~I~tr~G~~fg 335 (363)
T PF04864_consen 297 VREPSPAFAWLKCEREED----EDCYAVLREAKIITRSGVLFG 335 (363)
T ss_dssp EEE---SEEEEEESSCGG----SSHHHHHHCTTEEEEEGGGGT
T ss_pred ccCCCCCeEEEecCCccc----ccHHHHHHhCCcccCCCCccC
Confidence 123388999865322 234455678899999998874
No 324
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.59 E-value=2.6e-13 Score=132.12 Aligned_cols=209 Identities=21% Similarity=0.217 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH----HHHcCCEEEEEEcC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LSMAGAKIKCITLR 224 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~~ 224 (434)
..|.+.++++-+ .+ ..+.++++..||..++..++++||.|++++..|.+.... +..+|+++..++..
T Consensus 66 ~~lE~~~a~LEg--------~~-~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~ 136 (396)
T COG0626 66 DALEEALAELEG--------GE-DAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG 136 (396)
T ss_pred HHHHHHHHHhhC--------CC-cEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC
Confidence 456666666553 34 677888889999999999999999999999999886554 55678888777543
Q ss_pred CCCCCCCHHHHHhhcc-cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 225 PPDFAIPIEELKSTIS-KNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 225 ~~~~~~d~~~l~~~i~-~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
+.+.+++++. +++++|++.+|.||+-.+. ++++|+++|+++|+++|+|+.+....+.. .+ ..
T Consensus 137 ------~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~---DI~~i~~~A~~~g~~vvVDNTfatP~~q~------PL--~~ 199 (396)
T COG0626 137 ------DDEALEAAIKEPNTKLVFLETPSNPLLEVP---DIPAIARLAKAYGALVVVDNTFATPVLQR------PL--EL 199 (396)
T ss_pred ------ChHHHHHHhcccCceEEEEeCCCCcccccc---cHHHHHHHHHhcCCEEEEECCcccccccC------hh--hc
Confidence 4456676776 4999999999999999887 68889999999999999999997643321 11 12
Q ss_pred CceEEEccCChhhc-cccceeeeEEeChh-hHHHHHHHhh-ccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFS-LTGWKIGWAIAPPH-LTWGVRQAHS-FLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 304 ~~~i~i~S~SK~~g-~~G~R~G~~~~~~~-~~~~l~~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
+-.|++.|.+|.++ -...=.|.++++.+ +.+.+....+ ......++.-.+.+..-|+. +.-..++..++...+
T Consensus 200 GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT----L~~Rm~~~~~nA~~I 275 (396)
T COG0626 200 GADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRT----LALRMERHNENALKI 275 (396)
T ss_pred CCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHHH
Confidence 35699999999995 22233576665654 4444433333 24445555555555555554 334455666777777
Q ss_pred HHHhhhC
Q 013883 381 VEGLNAV 387 (434)
Q Consensus 381 ~~~L~~~ 387 (434)
.+.|++.
T Consensus 276 A~~L~~~ 282 (396)
T COG0626 276 AEFLADH 282 (396)
T ss_pred HHHHhcC
Confidence 7888764
No 325
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.59 E-value=1e-12 Score=132.21 Aligned_cols=308 Identities=13% Similarity=0.115 Sum_probs=179.9
Q ss_pred cCCeeEeCCCCC--CC-CCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFP--NF-DGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p--~~-~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...+||..|+- .+ -.+|.+.+++.+++++.........- .+....+++.+.+..+.. -+ .+++++++++++.
T Consensus 44 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~-~~~~~~la~~l~~~~~~~--~~-~v~f~~sGseA~e 119 (427)
T TIGR00508 44 GRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFT-HKPAIELCQKLVKMTPNA--LD-CVFLADSGSVAVE 119 (427)
T ss_pred CCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccC-CHHHHHHHHHHHhhCCCC--CC-EEEEeCCcHHHHH
Confidence 346788876631 11 24677888888888763221111001 122344555555443221 24 7999999999999
Q ss_pred HHHHHccC-------CC-CeEEEcCCCchhHHHHHHHc-CCE-------------EEEEEcCCCCCC-----CCHHHHHh
Q 013883 185 ATILGLIN-------PG-DEVILFAPFYDSYEATLSMA-GAK-------------IKCITLRPPDFA-----IPIEELKS 237 (434)
Q Consensus 185 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-G~~-------------~~~v~~~~~~~~-----~d~~~l~~ 237 (434)
.+++.... +| .+|+...-.|++....+..+ |.. +..++.....+. -|++.+++
T Consensus 120 ~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~ 199 (427)
T TIGR00508 120 VALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAK 199 (427)
T ss_pred HHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHH
Confidence 88875431 23 57888888888865433322 211 111111100111 14667777
Q ss_pred hccc---CCcEEEecCC-CCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccC
Q 013883 238 TISK---NTRAILMNTP-HNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSL 312 (434)
Q Consensus 238 ~i~~---~~~~i~~~~p-~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~ 312 (434)
.+.. +..+|++... .+-.|. .++.+.+++|.++|++||+++|+||++.++...|.......+.-.+| + .++
T Consensus 200 ~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pD--i--~~~ 275 (427)
T TIGR00508 200 LMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPD--I--LCV 275 (427)
T ss_pred HHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCC--E--EEe
Confidence 7642 3445555432 555565 45788999999999999999999999988755554333322322233 2 248
Q ss_pred Chhhccccc-eeeeEEeChhhHHHHHHHh-----hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh
Q 013883 313 GKTFSLTGW-KIGWAIAPPHLTWGVRQAH-----SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA 386 (434)
Q Consensus 313 SK~~g~~G~-R~G~~~~~~~~~~~l~~~~-----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~ 386 (434)
+|.++ .|+ .++.+++++++.+.+.... ...+++.++++..++.++|+..++ ++..++.+++.++|++.|++
T Consensus 276 gK~l~-gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~ 352 (427)
T TIGR00508 276 GKALT-GGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE--GEWQKQVSAIENQLKRELSP 352 (427)
T ss_pred chhhh-cCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH
Confidence 99997 785 7888899999888776321 223566678888888877774211 12345556666666666665
Q ss_pred CCC----EeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 387 VGF----KVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 387 ~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
++. .-+...|. ++-+.+.. ......+..+|+++ ||.+.+.
T Consensus 353 l~~~~~i~~vrg~G~-~~~i~~~~--~~~~~~~~~~l~~~-Gv~~~~~ 396 (427)
T TIGR00508 353 LRKNPVVKDVRVLGA-IGVVEMYK--PVNVEELQKKFVEQ-GVWIRPF 396 (427)
T ss_pred hhcCCCEEeEecccc-EEEEEECC--ccCHHHHHHHHHHC-CeEEEec
Confidence 532 11122233 33444421 12356788887765 9999764
No 326
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.57 E-value=1e-12 Score=133.30 Aligned_cols=309 Identities=12% Similarity=0.106 Sum_probs=184.9
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...||+..|.- .+. .+|.+.+++.+++.+..+....... .+.+..+++.+.+.... ..+ .+++++++++|++.
T Consensus 56 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~-~~~~~~lae~L~~~~p~--~~~-~v~f~~SGseAve~ 131 (460)
T PRK06916 56 NEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLA-NVPSILLAEKLIEVVPE--GLK-KVFYSDSGATAVEI 131 (460)
T ss_pred CEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccC-CHHHHHHHHHHHHhCCC--CCC-EEEEeCCcHHHHHH
Confidence 35788766521 122 3677888998888763211111111 23455566666654321 124 79999999999999
Q ss_pred HHHHccC-------CC-CeEEEcCCCchhHHHHHHHc-CC------------EEEEEEcCC--C-CCC--------CCHH
Q 013883 186 TILGLIN-------PG-DEVILFAPFYDSYEATLSMA-GA------------KIKCITLRP--P-DFA--------IPIE 233 (434)
Q Consensus 186 ~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~--~-~~~--------~d~~ 233 (434)
+++.... +| .+|+.....|++........ |. .+..+|..+ . .+. -+++
T Consensus 132 AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~ 211 (460)
T PRK06916 132 AIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLE 211 (460)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence 9876532 33 67888888888865433222 21 122233221 0 011 1356
Q ss_pred HHHhhcc---cCCcEEEecC-CCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEE
Q 013883 234 ELKSTIS---KNTRAILMNT-PHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVT 308 (434)
Q Consensus 234 ~l~~~i~---~~~~~i~~~~-p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~ 308 (434)
.+++.+. ++..+|++.. .+.-.|++ ++++.+++|.++|++||+++|.||++.+|...|.......+.-.+|
T Consensus 212 ~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PD---- 287 (460)
T PRK06916 212 ELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPD---- 287 (460)
T ss_pred HHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCC----
Confidence 6677764 3556666654 36666775 5788899999999999999999999998866665444433333344
Q ss_pred EccCChhhcccc-ceeeeEEeChhhHHHHHH-------HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 309 MNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQ-------AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 309 i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
+.+++|.++ .| +.+|.+++++++.+.+.. .....+++.++....++.+.|+..++ +++.++.+++-+++
T Consensus 288 iv~~gK~l~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l 364 (460)
T PRK06916 288 IMTAGKGLT-GGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEK--TNLIEQVARKTEYV 364 (460)
T ss_pred eeeeehhhh-cCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHH
Confidence 446899998 88 499999999998876542 11234777788888888888764221 12344555555555
Q ss_pred HHHhhhC---C-CEeecCCeeEEEeeecCCCC-----CCC----HHHHHHHHHHhcCeEEECC
Q 013883 381 VEGLNAV---G-FKVFPSSGTYFVVVDHTPFG-----HET----DIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 381 ~~~L~~~---g-~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~Ll~~~GV~v~pG 430 (434)
.+.|+++ . +.-+...|.|+ -+.+.... ... ...+...+++ .||++.|.
T Consensus 365 ~~~l~~l~~~~~v~~vrG~Glm~-giel~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~ 425 (460)
T PRK06916 365 ATQLEDLFALKHVGDIRQLGLMV-GIELVKNKETKEPFEWTERVGVQVCKRSRE-LGMLTRPL 425 (460)
T ss_pred HHHHHHhhcCCCeEEeecCCcee-eEEeecccccccCCCchhhHHHHHHHHHHH-CCeEEEec
Confidence 5555543 2 21233444443 33332110 000 2356666665 59999873
No 327
>PRK15029 arginine decarboxylase; Provisional
Probab=99.57 E-value=8.8e-13 Score=138.43 Aligned_cols=189 Identities=15% Similarity=0.069 Sum_probs=133.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCC
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPD 227 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~ 227 (434)
+.+..+.+|+.++ .++..+++||++.++.+++.+++++||+|+++..+|.+....+.+.|+++++++...+.
T Consensus 207 I~eAq~~aA~~fg--------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~ 278 (755)
T PRK15029 207 FGESEKYAARVFG--------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNR 278 (755)
T ss_pred HHHHHHHHHHHhC--------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccc
Confidence 4566666666665 34478999999999999999999999999999999999999999999999998643222
Q ss_pred ----CCCC-----HHHHHhhccc--CCc--------EEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCc-c
Q 013883 228 ----FAIP-----IEELKSTISK--NTR--------AILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDK-L 287 (434)
Q Consensus 228 ----~~~d-----~~~l~~~i~~--~~~--------~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~-~ 287 (434)
.+++ .+.+++++.. ..+ ++++++| +-.|++. ++++|+++|+++++.|++||||.. |
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~---di~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCY---NAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceee---CHHHHHHHHHhcCCeEEEECcccccc
Confidence 2344 8899988854 234 8888887 4469888 577799999999999999999965 3
Q ss_pred ccCCCCccccCC-----CCCCCceEEEccCChhhccccce-eeeEEeChh--hH--HHHHHHhhccccCCchH
Q 013883 288 AFEMDHISIASL-----PGMYERTVTMNSLGKTFSLTGWK-IGWAIAPPH--LT--WGVRQAHSFLTFATSTP 350 (434)
Q Consensus 288 ~~~~~~~~~~~~-----~~~~~~~i~i~S~SK~~g~~G~R-~G~~~~~~~--~~--~~l~~~~~~~~~~~~~~ 350 (434)
.|....+....+ ...+..+++++|..|.++ ++. .++++.+.+ .+ ++++........+.|..
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~--alTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY 425 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLY 425 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhccc--chhhhhhheeCCCccccCHHHHHHHHHHHcCCCcHH
Confidence 454332211222 112223599999999985 443 568887543 22 34554444333444444
No 328
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.57 E-value=2.6e-13 Score=130.61 Aligned_cols=185 Identities=17% Similarity=0.225 Sum_probs=143.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEEcCC
Q 013883 150 EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCITLRP 225 (434)
Q Consensus 150 ~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~ 225 (434)
.|.+.++++.+ .. +.++.+++..|+..++..++..|+.|+..+..|.+...++ ..+|++...+..+
T Consensus 81 ~le~~iaal~g--------a~-~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~- 150 (409)
T KOG0053|consen 81 VLESGIAALEG--------AA-HALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD- 150 (409)
T ss_pred HHHHHHHHHhC--------Cc-eEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh-
Confidence 45555555443 33 5788888899999999999999999999999999976654 4578888777665
Q ss_pred CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCc
Q 013883 226 PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYER 305 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~ 305 (434)
|++++++++++++++|++.+|.||+..+. ++++|+++|+++|+++|+|+.+....+. .... .+-
T Consensus 151 -----~~~~~~~~i~~~t~~V~~ESPsNPll~v~---DI~~l~~la~~~g~~vvVDnTf~~p~~~----~pL~----lGA 214 (409)
T KOG0053|consen 151 -----DLKKILKAIKENTKAVFLESPSNPLLKVP---DIEKLARLAHKYGFLVVVDNTFGSPYNQ----DPLP----LGA 214 (409)
T ss_pred -----hHHHHHHhhccCceEEEEECCCCCccccc---cHHHHHHHHhhCCCEEEEeCCcCccccc----Chhh----cCC
Confidence 68899999999999999999999999998 6777888899999999999998775321 1111 234
Q ss_pred eEEEccCChhhc-cccceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHh
Q 013883 306 TVTMNSLGKTFS-LTGWKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALR 360 (434)
Q Consensus 306 ~i~i~S~SK~~g-~~G~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~ 360 (434)
.|++.|.+|.+| -...=.|.++.+ .++...++..+....++.++...+....-|+
T Consensus 215 DIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglk 271 (409)
T KOG0053|consen 215 DIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLK 271 (409)
T ss_pred CEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcc
Confidence 589999999995 333446888886 8899999888877777777776555544444
No 329
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.56 E-value=3.7e-13 Score=132.50 Aligned_cols=241 Identities=16% Similarity=0.144 Sum_probs=157.6
Q ss_pred CCcHHHHHHHHHHHHcC----CCCCCCC-------CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCC-hHHHHHHHHHH
Q 013883 122 DGPDFVKDAAIQAIRDG----KNQYARG-------HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSG-CTEAIAATILG 189 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~----~~~Y~~~-------~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G-~~~ai~~~~~~ 189 (434)
+.|+.|++++.+.+.+. ...|... .-+.+.|+.++++++ . -+++ +|++++| +|++++.++..
T Consensus 9 ~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~----~-~~~~-~vvf~~gs~T~a~~~~~~~ 82 (355)
T cd00611 9 ALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLN----I-PDNY-KVLFLQGGATGQFAAVPLN 82 (355)
T ss_pred CCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC----C-CCCc-eEEEEcCCchHHHHHHHHh
Confidence 35678888888776431 1112221 112345555665554 2 1234 7888877 99999999999
Q ss_pred ccC---CCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCC-C-HHHHHhhcccCCcEEEecCCCCCcccCCCHHHH
Q 013883 190 LIN---PGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAI-P-IEELKSTISKNTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 190 l~~---~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~-d-~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
++. +||.|++ .+......++++..|++++.++.++ ++.. + .+..+..+++++++|.+++..|.||+.++
T Consensus 83 l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~---- 156 (355)
T cd00611 83 LLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKE-EGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD---- 156 (355)
T ss_pred cCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEeccc-ccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc----
Confidence 987 4444443 3333334557788899999988764 2222 3 33333456778999999999999999742
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHH-----
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA----- 339 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~----- 339 (434)
++++.||+++++|.+...... ...+..+ + +.+.|..|.+|.+| +|+++++++.++++...
T Consensus 157 ----~i~~~~g~~~~VDa~qs~g~~---~idv~~~----~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~ 221 (355)
T cd00611 157 ----EVPDTGGVPLVADMSSNILSR---PIDVSKF----G--VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSML 221 (355)
T ss_pred ----eecccCCCeEEEEccccccCC---CCCHHHh----C--EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCcc
Confidence 344569999999999976331 2222221 2 45566789999777 89999998887654321
Q ss_pred ------hh-ccccCCchHHHHHHHHHHhCCh-H-HHHHHHHHHHHHHHHHHHHhhhC-CC
Q 013883 340 ------HS-FLTFATSTPMQWAATAALRAPE-T-YYEELKRDYSAKKAILVEGLNAV-GF 389 (434)
Q Consensus 340 ------~~-~~~~~~~~~~q~a~~~~L~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~-g~ 389 (434)
.. ...++++....+++.++|+... . .++.+.++.++..+++++.|+++ |+
T Consensus 222 ~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl 281 (355)
T cd00611 222 NYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF 281 (355)
T ss_pred cHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 11 1134556666677777776533 2 37788889999999999999998 75
No 330
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.56 E-value=3.7e-13 Score=132.80 Aligned_cols=204 Identities=19% Similarity=0.211 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHH----HHHHHcCCEEEEEEcC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE----ATLSMAGAKIKCITLR 224 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~~ 224 (434)
.+|.+.++++.+ .+ ..+++++++.|+.+++.+++++||+|+++.+.|.+.. ..+...|++++.++.+
T Consensus 67 ~~lE~~la~leg--------~~-~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~ 137 (384)
T PRK06434 67 QAFEEKYAVLEN--------AE-HALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTD 137 (384)
T ss_pred HHHHHHHHHHhC--------CC-cEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCC
Confidence 456666666654 34 5677777789999999999999999999887666543 5667789999999876
Q ss_pred C-CCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC
Q 013883 225 P-PDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM 302 (434)
Q Consensus 225 ~-~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~ 302 (434)
+ +++. +++ ++++|++..|.|||+.+. ++++|+++|++++ +++|.++..- +.+. ++.
T Consensus 138 ~~~~~~---------l~~~~tklv~~e~~snpt~~v~---Di~~I~~la~~~~--lvVD~t~~s~-~~~~--pl~----- 195 (384)
T PRK06434 138 RLNSLD---------FDPSNYDLIYAESITNPTLKVP---DIKNVSSFCHEND--VIVDATFASP-YNQN--PLD----- 195 (384)
T ss_pred Chhhee---------ecCCCeeEEEEEcCCCCCceee---cHHHHHHHHHHcC--eEEECCCCCc-ccCC--chh-----
Confidence 4 2222 223 689999999999999886 6788999999998 4669997432 1111 111
Q ss_pred CCceEEEccCChhhcccc-ceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 303 YERTVTMNSLGKTFSLTG-WKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 303 ~~~~i~i~S~SK~~g~~G-~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
.+-.+++.|.+|.++-+| .-.|.++.+ +++.++++..+.......+....+.+..-|+. ++...++..++...+
T Consensus 196 ~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t----L~~R~~r~~~~a~~~ 271 (384)
T PRK06434 196 LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKT----LGLRMEKHNKNGMEL 271 (384)
T ss_pred cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc----HHHHHHHHHHHHHHH
Confidence 234588999999996333 335777664 55666666554333344444433333333333 455556667777777
Q ss_pred HHHhhhC
Q 013883 381 VEGLNAV 387 (434)
Q Consensus 381 ~~~L~~~ 387 (434)
.+.|++.
T Consensus 272 a~~L~~~ 278 (384)
T PRK06434 272 ARFLRDS 278 (384)
T ss_pred HHHHHcC
Confidence 7888765
No 331
>PRK06149 hypothetical protein; Provisional
Probab=99.56 E-value=6.4e-13 Score=146.03 Aligned_cols=308 Identities=13% Similarity=0.106 Sum_probs=180.3
Q ss_pred cCCeeEeCCCCCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
+...||+..|+..+. .+|.+.+++.+++...... .... .+....+++.+.+.... ..+ .++++++|++|++.+
T Consensus 584 G~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~--~~~~-~~~~~elae~L~~~~p~--~~~-~v~f~~SGsEA~e~A 657 (972)
T PRK06149 584 GRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTN--SRFH-YAAVAEFSERLAALAPD--GLD-TVFLVNSGSEANDLA 657 (972)
T ss_pred CCEEEECCCCccccCCCCHHHHHHHHHHHHhcccc--cccc-CHHHHHHHHHHHHhCCC--CcC-EEEEeCCchHHHHHH
Confidence 345788887765555 5788999998888764321 1112 23445556665544321 124 799999999999999
Q ss_pred HHHcc--CCCCeEEEcCCCchhHHHHHHHc-CC-------------EEEEEEcCC--C-CCC-CC-----HHHHHhhcc-
Q 013883 187 ILGLI--NPGDEVILFAPFYDSYEATLSMA-GA-------------KIKCITLRP--P-DFA-IP-----IEELKSTIS- 240 (434)
Q Consensus 187 ~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~--~-~~~-~d-----~~~l~~~i~- 240 (434)
++... ...+.|+..+-.|++........ +. .+..++... . .+. .+ .+.+++.+.
T Consensus 658 lklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 737 (972)
T PRK06149 658 IRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEE 737 (972)
T ss_pred HHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHH
Confidence 88432 23356888888787644222111 10 012222211 0 011 11 233333332
Q ss_pred -----cCCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCC
Q 013883 241 -----KNTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLG 313 (434)
Q Consensus 241 -----~~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~S 313 (434)
++..+|++.......|. .++++.+++|.++|++||+++|+||++.+|...|. .+.+..+.-.+| +.+++
T Consensus 738 ~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PD----ivt~g 813 (972)
T PRK06149 738 LDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPD----IITMA 813 (972)
T ss_pred HhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCC----EEEec
Confidence 23455665544444454 56777899999999999999999999988865554 223333322333 44889
Q ss_pred hhhccccceeeeEEeChhhHHHHHHH-hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh----CC
Q 013883 314 KTFSLTGWKIGWAIAPPHLTWGVRQA-HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA----VG 388 (434)
Q Consensus 314 K~~g~~G~R~G~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g 388 (434)
|.+| .|..+|.+++++++.+.+... ....+++.++.+.+++.+.|+.-++ +++.++.+++-++|++.|++ .+
T Consensus 814 K~lg-~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~~~ 890 (972)
T PRK06149 814 KGMG-NGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE--EKLQENARRVGDHLKARLEALADRHP 890 (972)
T ss_pred cccc-CCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999 899999999999998777531 1124567788888888888875221 13344454455555555544 33
Q ss_pred CE-eecCCeeEEEeeecCCC-----C-CCCHHHHHHHHHHhcCeEEECC
Q 013883 389 FK-VFPSSGTYFVVVDHTPF-----G-HETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 389 ~~-~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+. .+...|. ++-+.+... + ......++++++++ ||++.|.
T Consensus 891 ~i~~vrG~Gl-~~gvel~~~~~~~~~~~~~~~~i~~~l~~~-Gvl~~~~ 937 (972)
T PRK06149 891 LIGAVHGMGL-YLGVELVRDRQTLEPATEETAAICDRLLEL-GVIMQPT 937 (972)
T ss_pred CeEEEeecce-EEEEEEecCcccCCCChHHHHHHHHHHHhC-CeEEeec
Confidence 32 2233344 444444211 0 00134567777665 9999874
No 332
>PRK06148 hypothetical protein; Provisional
Probab=99.56 E-value=6.6e-13 Score=146.06 Aligned_cols=309 Identities=12% Similarity=0.048 Sum_probs=183.7
Q ss_pred cCCeeEeCCCCCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
+...|||..|...+. .+|.+.+++.+++....... ... .+.+..+++.+....... .+ .++++++++||++.+
T Consensus 623 G~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~--~~~-~~~~~~lAe~L~~~~p~~--~~-~v~f~nSGsEA~e~A 696 (1013)
T PRK06148 623 GRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNT--RYL-HDAIVAYAERLTATLPDG--LT-VAFFVNSGSEANSLA 696 (1013)
T ss_pred CCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcC--CcC-CHHHHHHHHHHHHhCCCC--cC-EEEEeCCcHHHHHHH
Confidence 345688876643333 36889999998887632211 111 344555666666544221 24 789999999999999
Q ss_pred HHHcc--CCCCeEEEcCCCchhHHHHHHHc-C------------CEEEEEEcCC---CCCCC-C-------HHHHHhhcc
Q 013883 187 ILGLI--NPGDEVILFAPFYDSYEATLSMA-G------------AKIKCITLRP---PDFAI-P-------IEELKSTIS 240 (434)
Q Consensus 187 ~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G------------~~~~~v~~~~---~~~~~-d-------~~~l~~~i~ 240 (434)
++... ....+|+.....|++........ | ..+..++... ..+.. + .+.+++.+.
T Consensus 697 lklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~ 776 (1013)
T PRK06148 697 LRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIA 776 (1013)
T ss_pred HHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHH
Confidence 87653 23467888888888764332211 1 0111111110 00110 1 134444442
Q ss_pred ------cCCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccC
Q 013883 241 ------KNTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSL 312 (434)
Q Consensus 241 ------~~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~ 312 (434)
+++.+|++.....-.|. .++++.+++|.++|++||+++|.||++.+|...|. .+....+.-.+| +.++
T Consensus 777 ~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PD----ivt~ 852 (1013)
T PRK06148 777 AMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPD----IVTM 852 (1013)
T ss_pred hhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcc----eeee
Confidence 24556666544444555 55777799999999999999999999999866554 333333332344 6678
Q ss_pred ChhhccccceeeeEEeChhhHHHHHHH-hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh----C
Q 013883 313 GKTFSLTGWKIGWAIAPPHLTWGVRQA-HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA----V 387 (434)
Q Consensus 313 SK~~g~~G~R~G~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~----~ 387 (434)
+|.+| .|+.+|.+++++++.+.+..- ....+++.++.+..++.+.|+..++ +++.++.+++-++|++.|++ .
T Consensus 853 gK~lg-gG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~~ 929 (1013)
T PRK06148 853 GKPIG-NGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED--EDLQRNALEIGNYLLAGLRELQDRF 929 (1013)
T ss_pred ccccc-CCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999 899999999999998776432 1236788889998888888875321 12344445555555555544 3
Q ss_pred CCEeecCCeeEEEeeecCCCC--CCC----HHHHHHHHHHhcCeEEECC
Q 013883 388 GFKVFPSSGTYFVVVDHTPFG--HET----DIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 388 g~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~Ll~~~GV~v~pG 430 (434)
++......-|+++-+.+.... ... ...+.+.+++ +||++.+.
T Consensus 930 ~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~ 977 (1013)
T PRK06148 930 DIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARE-RGILIGTE 977 (1013)
T ss_pred CCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHh-CCeEEecc
Confidence 332222233444444442110 111 2346666665 59999873
No 333
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.56 E-value=2e-12 Score=129.84 Aligned_cols=274 Identities=18% Similarity=0.193 Sum_probs=188.3
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccC-----C---
Q 013883 122 DGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLIN-----P--- 193 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~-----~--- 193 (434)
.+++...+.+...+..+.....-..+..++.+.+..++.+.++.+-.. .=.+|+|+++++.+++.+... .
T Consensus 73 ~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~--~G~~t~GgTean~lal~aar~~~~~~~~~~ 150 (460)
T COG0076 73 RVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEA--SGTFTSGGTEANLLALLAARERWRKRALAE 150 (460)
T ss_pred CCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCC--ceEEEcChHHHHHHHHHHHHHHHHHHhhhc
Confidence 345667777777776543222122266899999999999998876222 468899999999877665421 1
Q ss_pred C------CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcE--EEecCCCCCcccCCCHHHHH
Q 013883 194 G------DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRA--ILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 194 g------d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~--i~~~~p~NPTG~~~~~e~l~ 265 (434)
+ .+|+++.-.|+.+...+..+|.....++.++.+..+|++++++++.+++.. |+-+...-+||.+ ++++
T Consensus 151 ~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---Ddi~ 227 (460)
T COG0076 151 SGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---DDIE 227 (460)
T ss_pred ccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---CCHH
Confidence 1 169999999999999999999999999998767899999999999997766 7777889999975 3688
Q ss_pred HHHHHHHHcCcEEEEcCcCCcccc--CCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh--hHHHHHHHhh
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAF--EMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH--LTWGVRQAHS 341 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~--~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~--~~~~l~~~~~ 341 (434)
+|.++|+++++|+.+|.||+++.. ...... ..+ +...-.-+.-++.|.. +.-..+||++.+.+ +.+.+.....
T Consensus 228 ~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~-~~f-~l~~vdSIt~d~HK~g-~aP~~~G~il~rd~e~l~~~~~~~~~ 304 (460)
T COG0076 228 ELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR-WDF-GLEGVDSITVDGHKYG-LAPIGCGVVLFRDEEALRRILIFADY 304 (460)
T ss_pred HHHHHHHHcCCcEEEEccccceeecccCccch-hhc-CCCCceEEEECccccc-CCCCCceEEEEECHHHhhhhhhcccc
Confidence 899999999999999999998863 111111 011 1112223456899965 46678999998754 3333321111
Q ss_pred ccc--------cCCchHH--HHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCC-CEeec-CCeeEEEeeec
Q 013883 342 FLT--------FATSTPM--QWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVG-FKVFP-SSGTYFVVVDH 404 (434)
Q Consensus 342 ~~~--------~~~~~~~--q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~-~~~~~~~~~~~ 404 (434)
++. ...+.++ ..++...|.. +.+.++++.++..+..+.+.+.|++.| +++.. |..+ .+.+++
T Consensus 305 yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~-~V~fr~ 379 (460)
T COG0076 305 YLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELP-IVAFRL 379 (460)
T ss_pred cCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccc-eEEEEc
Confidence 111 1111122 1222222332 356788889999999999999999986 88765 4444 455555
No 334
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.56 E-value=2.2e-12 Score=126.37 Aligned_cols=281 Identities=15% Similarity=0.134 Sum_probs=184.0
Q ss_pred cHHHHHHHHHHHHc----CCCCCCCCCCcH---HHHHHHHHHHHhhcCCCCCCCCcEEEcCC-hHHHHHHHHHHccCCCC
Q 013883 124 PDFVKDAAIQAIRD----GKNQYARGHGVP---EFNSAIASRFKKDSGLEVDPEKEVTVTSG-CTEAIAATILGLINPGD 195 (434)
Q Consensus 124 ~~~v~~~~~~~~~~----~~~~Y~~~~G~~---~lr~~ia~~l~~~~g~~~~~~~~i~~t~G-~~~ai~~~~~~l~~~gd 195 (434)
|..+.+++.+.+.+ +...|....-.+ ++.+.+.+.+.+.++.+ .+.+|++++| +++++++++..++.+||
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~--~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP--DNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC--CCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 55677777776653 111222222223 55555566666666642 2225777766 99999999999999999
Q ss_pred eEEEcCCCchhH--HHHHHHcCCEEEEEEcCC---CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHH
Q 013883 196 EVILFAPFYDSY--EATLSMAGAKIKCITLRP---PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASL 270 (434)
Q Consensus 196 ~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~---~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~l 270 (434)
++++..-+.+++ .++++..|+ +..+..++ ....+|++.++ +++++++|.+++..+.||+..+ ++
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~l 150 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------EL 150 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------ee
Confidence 988887776664 567888999 77776542 12345666555 3568899999999999999764 45
Q ss_pred HHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHH----------h
Q 013883 271 CIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA----------H 340 (434)
Q Consensus 271 a~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~----------~ 340 (434)
++.+++++++|.+..... ....+.. .+ +++.|..|.+|.+| +|+++.+++.++++... .
T Consensus 151 ~~~~~~l~iVDavss~g~---~~id~~~----~d--~~~~ssqK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~~~ 219 (349)
T TIGR01364 151 PDVKNAPLVADMSSNILS---RPIDVSK----FG--LIYAGAQKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKIHA 219 (349)
T ss_pred cccCCCeEEEEccccccC---ccCCHHH----cc--EEEEecccccCCCc--eEEEEECHHHHhhcccCCCCcchHHHHH
Confidence 667899999999987632 2222222 12 78889999999777 89999998887654211 1
Q ss_pred --hccccCCchHHHHHHHHHHhCCh-H-HHHHHHHHHHHHHHHHHHHhhhC-CCEeecC----CeeEEEeeecCCCCCCC
Q 013883 341 --SFLTFATSTPMQWAATAALRAPE-T-YYEELKRDYSAKKAILVEGLNAV-GFKVFPS----SGTYFVVVDHTPFGHET 411 (434)
Q Consensus 341 --~~~~~~~~~~~q~a~~~~L~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~~~~~~~ 411 (434)
....++++....+++..+|+... + .++++.++.++..+++++.|+++ |+..... ..+..+-+.++... .
T Consensus 220 ~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~--~ 297 (349)
T TIGR01364 220 ENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEE--L 297 (349)
T ss_pred hcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChh--H
Confidence 12235667777777777777543 3 48888999999999999999998 5533321 12222333332211 1
Q ss_pred HHHHHHHHHHhcCeEEECCC
Q 013883 412 DIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG~ 431 (434)
..++...+ .+.|+.+.+|.
T Consensus 298 ~~~~~~~~-~~~Gi~~~~~~ 316 (349)
T TIGR01364 298 EKRFLKEA-EERGLVSLKGH 316 (349)
T ss_pred hHHHHHHH-HHCCCcccCCc
Confidence 23444444 45699887774
No 335
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.56 E-value=1.1e-12 Score=128.61 Aligned_cols=296 Identities=14% Similarity=0.093 Sum_probs=175.8
Q ss_pred cHHHHHHHHHHHHcCCCCCCC-CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc-------CCC-
Q 013883 124 PDFVKDAAIQAIRDGKNQYAR-GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI-------NPG- 194 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~-------~~g- 194 (434)
.+.+.+++.+++.+-.+.+.. ..+.+ -..+|+.|.+..+.. +-+ +|++++|+++|++.+++..+ +|.
T Consensus 62 ~~~i~~Ai~~Q~~~l~~~~~~~~t~~P--a~~LA~~L~~~aP~~-~l~-~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r 137 (449)
T COG0161 62 RPEIAEAIKKQLDKLPHVMFGGFTHEP--AIELAEKLAELAPEG-GLD-HVFFTDSGSEAVETALKMALQYWRARGQPQR 137 (449)
T ss_pred CHHHHHHHHHHHHhCCchhhcccCCch--HHHHHHHHHHhCCCC-Ccc-EEEEeCCchHHHHHHHHHHHHHHHhcCCCcc
Confidence 466888888888774332111 12223 333555555443311 123 89999999999999987653 333
Q ss_pred CeEEEcCCCchhHHHHHHHcC--------------CEEEEEEcCC---C----CCC----CCHHHHHhhccc---CCcEE
Q 013883 195 DEVILFAPFYDSYEATLSMAG--------------AKIKCITLRP---P----DFA----IPIEELKSTISK---NTRAI 246 (434)
Q Consensus 195 d~Vlv~~p~y~~~~~~~~~~G--------------~~~~~v~~~~---~----~~~----~d~~~l~~~i~~---~~~~i 246 (434)
.+++.-...|++-.-.....| ..+..+|... . .+. -.++.|++.+.. ++.+-
T Consensus 138 ~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAA 217 (449)
T COG0161 138 KKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAA 217 (449)
T ss_pred eEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEE
Confidence 347777888876322211111 1122222211 0 111 225667776654 44454
Q ss_pred EecCC-CCC-cccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccccee
Q 013883 247 LMNTP-HNP-TGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKI 323 (434)
Q Consensus 247 ~~~~p-~NP-TG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~ 323 (434)
++..| ..- +|+.+ ++..|+++.++|++||+++|.||+-.+|...|.........-.+| +-+++|.+.-.-+.+
T Consensus 218 fI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PD----i~~~aKGLT~GY~Pl 293 (449)
T COG0161 218 FIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPD----ILCLAKGLTGGYLPL 293 (449)
T ss_pred EEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCC----eeeecccccccchhh
Confidence 55555 444 78855 555699999999999999999999999988876555544444455 667899987333478
Q ss_pred eeEEeChhhHHHHHHH-----hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh-C-CCEee--cC
Q 013883 324 GWAIAPPHLTWGVRQA-----HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA-V-GFKVF--PS 394 (434)
Q Consensus 324 G~~~~~~~~~~~l~~~-----~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~--~~ 394 (434)
|.+++..++.+.+..- ....+|+.++.+.+++.+.|+-.+ -+.+.++.++.-.++.+.|+. + +.+.+ ..
T Consensus 294 ~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e--~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR 371 (449)
T COG0161 294 SAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILE--EEDLLERVAEIGAYLQAGLQAALADHPLVGDVR 371 (449)
T ss_pred HhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHhcccCCcEEEee
Confidence 8888888888877553 122367888888888887776421 123444455555666666665 2 21222 23
Q ss_pred CeeEEEeeecCCCCCCC-------HHHHHHHHHHhcCeEEECC
Q 013883 395 SGTYFVVVDHTPFGHET-------DIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 395 ~~~~~~~~~~~~~~~~~-------~~~~~~~Ll~~~GV~v~pG 430 (434)
.-|++.-+.+.+..... ...+....++ .|+.++|.
T Consensus 372 ~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e-~Gl~iRp~ 413 (449)
T COG0161 372 GLGLIGAIELVADKATKTPFEARVGARVRAAALE-RGLLIRPL 413 (449)
T ss_pred ccceEEEEEEecccccccchhhhHHHHHHHHHHH-CCeEEeec
Confidence 45556555553321111 3345555544 59999996
No 336
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.55 E-value=2.5e-13 Score=127.50 Aligned_cols=225 Identities=20% Similarity=0.250 Sum_probs=138.1
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEE---cCChHHHHHHHHHHccCCCCeEEE-cCCCchhHHHHH----------HHcCCE
Q 013883 152 NSAIASRFKKDSGLEVDPEKEVTV---TSGCTEAIAATILGLINPGDEVIL-FAPFYDSYEATL----------SMAGAK 217 (434)
Q Consensus 152 r~~ia~~l~~~~g~~~~~~~~i~~---t~G~~~ai~~~~~~l~~~gd~Vlv-~~p~y~~~~~~~----------~~~G~~ 217 (434)
|+.+-+.+.+.+|. | .-++ --++|+||..++..+++|||+++. .-.-|.....++ +.+|.+
T Consensus 56 Rd~le~iyA~vfga----E-~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~ 130 (403)
T PF06838_consen 56 RDKLERIYADVFGA----E-DALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIK 130 (403)
T ss_dssp HHHHHHHHHHHCT-----S-EEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-E
T ss_pred HHHHHHHHHHHhCc----h-hhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCce
Confidence 66666667666654 3 2222 234599999999999999999885 445676666664 557789
Q ss_pred EEEEEcCCCCCCCCHHHHHhhcccCCcEEEec-CCCCCcccCCCHHHHHHHHHHHHHc--CcEEEEcCcCCccccCCCCc
Q 013883 218 IKCITLRPPDFAIPIEELKSTISKNTRAILMN-TPHNPTGKMFTREELNVIASLCIEN--DVLVFSDEVYDKLAFEMDHI 294 (434)
Q Consensus 218 ~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~-~p~NPTG~~~~~e~l~~i~~la~~~--~~~iI~Deay~~~~~~~~~~ 294 (434)
...|++.+ ++.+|+|.+++++++++|+|++. +--.-+-..++.++++++++++++. ++++++|.+|.+|.-..++.
T Consensus 131 Y~~v~L~~-dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~ 209 (403)
T PF06838_consen 131 YREVPLTE-DGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPT 209 (403)
T ss_dssp EEE--B-T-TSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GG
T ss_pred eEEEeecC-CCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCcc
Confidence 99999986 78999999999999999999986 3344444577999999999999874 99999999999987443322
Q ss_pred cccCCCCCCCceEEEccCChhhccccc--eeeeEEeChhhHHHHHHHhhccc----cCCchHHHHHHHHHHhCChHHHHH
Q 013883 295 SIASLPGMYERTVTMNSLGKTFSLTGW--KIGWAIAPPHLTWGVRQAHSFLT----FATSTPMQWAATAALRAPETYYEE 368 (434)
Q Consensus 295 ~~~~~~~~~~~~i~i~S~SK~~g~~G~--R~G~~~~~~~~~~~l~~~~~~~~----~~~~~~~q~a~~~~L~~~~~~~~~ 368 (434)
. -+-.++.+|+-|+.| .|+ -.||+++++++++++......-. .+++.-..+.+..-|= .--+
T Consensus 210 ~-------vGADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~QGlF----lAP~ 277 (403)
T PF06838_consen 210 E-------VGADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGTNRLMFQGLF----LAPH 277 (403)
T ss_dssp G-------GT-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTTHHHHHHHHH----HHHH
T ss_pred c-------cchhheeccceeCCC-CCccCcCCEEechHHHHHHHHhhhcCCccccccccCcchHHHHHhHHh----hchH
Confidence 2 233488999999998 665 25899999999987754321110 1111111222211111 1123
Q ss_pred HHHHHHHHHHHHHHHhhhCCCEeecC
Q 013883 369 LKRDYSAKKAILVEGLNAVGFKVFPS 394 (434)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 394 (434)
+..+..+-.......++++|+++.|.
T Consensus 278 vV~eAlKgaif~A~~fe~lG~~v~P~ 303 (403)
T PF06838_consen 278 VVGEALKGAIFAAALFEKLGFEVSPK 303 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-EEES-
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCCCC
Confidence 44444445556667788899999864
No 337
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.54 E-value=9e-14 Score=135.67 Aligned_cols=243 Identities=14% Similarity=0.130 Sum_probs=156.5
Q ss_pred CeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..+||..|+ -.+. .+|.+.+++.+++....+...+ ....+...++++.+.+..+. ..+ .+++++++++|++.+
T Consensus 17 ~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~-~~~~~~~~~la~~L~~~~p~--~~~-~v~f~~sGseAve~A 92 (339)
T PF00202_consen 17 EYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFS-GFTHPEAAELAEKLAELFPG--GLD-RVFFANSGSEAVEAA 92 (339)
T ss_dssp EEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTT-TSEEHHHHHHHHHHHHHSST--TEE-EEEEESSHHHHHHHH
T ss_pred EEEECCCCccceecCCCccccchhHHHHhhhccccccc-ceeccchhhhhhhhhhcccc--ccc-eeeeccCchHHHHHH
Confidence 568886552 2222 3577888898888765333222 23345567777777766633 233 899999999999999
Q ss_pred HHHcc--------CCCCeEEEcCCCchhHHHHHHHcC-------------CEEEEEEcCCCCC----CCCHHHHHhhc--
Q 013883 187 ILGLI--------NPGDEVILFAPFYDSYEATLSMAG-------------AKIKCITLRPPDF----AIPIEELKSTI-- 239 (434)
Q Consensus 187 ~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~G-------------~~~~~v~~~~~~~----~~d~~~l~~~i-- 239 (434)
++... .....|+.....|++........+ ..+..+|++.... .-..+.+++.+
T Consensus 93 lkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 172 (339)
T PF00202_consen 93 LKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAA 172 (339)
T ss_dssp HHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHh
Confidence 88765 233688989999987543222211 1345666653100 00011122222
Q ss_pred --ccCCcEEEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhh
Q 013883 240 --SKNTRAILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTF 316 (434)
Q Consensus 240 --~~~~~~i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 316 (434)
.++..+|++...+...|... +.+.+++|.++|++||+++|+||++.+|...|.......+.-.+| +-+++|.+
T Consensus 173 ~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PD----iv~~gK~l 248 (339)
T PF00202_consen 173 LNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPD----IVTFGKGL 248 (339)
T ss_dssp HHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSS----EEEEEGGG
T ss_pred hcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCc----ccccccch
Confidence 33556666654455556644 566799999999999999999999999977666554444443444 45568999
Q ss_pred ccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhC
Q 013883 317 SLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRA 361 (434)
Q Consensus 317 g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~ 361 (434)
+ .|+.+|.+++++++.+.+.......+++.++.+..++.+.|+.
T Consensus 249 ~-gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~ 292 (339)
T PF00202_consen 249 G-GGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEI 292 (339)
T ss_dssp G-TTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHH
T ss_pred h-hhhhcccccccchhhccccccccccccccchHhhhhhhhHHHh
Confidence 9 8899999999999887665444556788888888888888875
No 338
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.54 E-value=1.5e-12 Score=128.02 Aligned_cols=286 Identities=15% Similarity=0.112 Sum_probs=182.4
Q ss_pred CCcHHHHHHHHHHHHcC----CCCCCCCCC---cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCC
Q 013883 122 DGPDFVKDAAIQAIRDG----KNQYARGHG---VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPG 194 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~----~~~Y~~~~G---~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~g 194 (434)
..|+.+++++.+.+.+- ...+....- ..++.+.+.+.+.+..+.+ +..+-++++++++.+++.++..++.+|
T Consensus 13 ~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~~~nl~~~g 91 (360)
T PRK05355 13 MLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMVPMNLLGGG 91 (360)
T ss_pred CCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHHHHhcCCCC
Confidence 34677888877765321 111111111 1255555555566555542 122134555778889999999999999
Q ss_pred CeEEEcCCCchhH--HHHHHHcCCEEEEEEcCCCCCCCCHHHHHh-hcccCCcEEEecCCCCCcccCCCHHHHHHHHHHH
Q 013883 195 DEVILFAPFYDSY--EATLSMAGAKIKCITLRPPDFAIPIEELKS-TISKNTRAILMNTPHNPTGKMFTREELNVIASLC 271 (434)
Q Consensus 195 d~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~-~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la 271 (434)
|++++..-..+++ .++++..|.. ..+..++.....+..++++ .+++++++|.+++-.+.||+..+ ++++|
T Consensus 92 ~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~~i---- 164 (360)
T PRK05355 92 KKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELPDT---- 164 (360)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEecC--ccccc----
Confidence 9988877766664 5678888865 5555443123334444444 77778999999999999999874 34444
Q ss_pred HHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHH-----------h
Q 013883 272 IENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA-----------H 340 (434)
Q Consensus 272 ~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~-----------~ 340 (434)
+|+++|+|.+..... ....+..+ + +++.|-.|.+|.+| +|+++++++.++++... .
T Consensus 165 --~g~l~vVDavss~g~---~~idv~~~----d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~~~~ 231 (360)
T PRK05355 165 --GDVPLVADMSSDILS---RPIDVSKF----G--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKTHAD 231 (360)
T ss_pred --CCCcEEEEcCccccC---ccCCHHHc----c--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHHHHHh
Confidence 899999999987632 22222221 2 78888899999777 89999998887665431 1
Q ss_pred -hccccCCchHHHHHHHHHHhCCh-H-HHHHHHHHHHHHHHHHHHHhhhCCCE-eecC---CeeEEEeeecCCCCCCCHH
Q 013883 341 -SFLTFATSTPMQWAATAALRAPE-T-YYEELKRDYSAKKAILVEGLNAVGFK-VFPS---SGTYFVVVDHTPFGHETDI 413 (434)
Q Consensus 341 -~~~~~~~~~~~q~a~~~~L~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~---~~~~~~~~~~~~~~~~~~~ 413 (434)
....++++....+++..+|+... + .++++.++.++..+++++.|+++|+. ...+ ..+..+.+.++. +. +..
T Consensus 232 ~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~-~~-~~~ 309 (360)
T PRK05355 232 NDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLAD-EE-LDK 309 (360)
T ss_pred cCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCC-hH-HHH
Confidence 12246677777777777777632 3 47888899999999999999998752 2111 122223333322 11 223
Q ss_pred HHHHHHHHhcCeEEECCC
Q 013883 414 AFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 414 ~~~~~Ll~~~GV~v~pG~ 431 (434)
++...+. +.|+.+.+|.
T Consensus 310 ~~~~~~~-~~Gi~~~~~~ 326 (360)
T PRK05355 310 KFLAEAK-AAGLVGLKGH 326 (360)
T ss_pred HHHHHHH-HCCCcccCCC
Confidence 4445554 4699887764
No 339
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.53 E-value=1.3e-12 Score=129.77 Aligned_cols=291 Identities=14% Similarity=0.085 Sum_probs=171.8
Q ss_pred eeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcC-ChHHHHHHHHHH
Q 013883 111 AINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTS-GCTEAIAATILG 189 (434)
Q Consensus 111 ~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~-G~~~ai~~~~~~ 189 (434)
.++|..| |.-.++..+++++.+......+ ..+ -..++.+.+.+.+.+..+.+ ++. +|+++. +++++++.++..
T Consensus 13 ~~~f~~G-p~~~~~~~v~~a~~~~~~~~~h-r~~--~f~~~~~~~r~~l~~l~~~~-~~~-~v~~~~gs~T~~~~~~~~~ 86 (378)
T PRK03080 13 DPRFSSG-PCKKRPGWQLEALADALLGRSH-RQK--PVKALLKRVIEGTRELLSLP-EGY-EVGIVPGSDTGAWEMALWS 86 (378)
T ss_pred CCCcCCC-CcCCChHHHHHHHHhhhcccCc-CCH--HHHHHHHHHHHHHHHHhCCC-CCc-eEEEECCchHHHHHHHHHh
Confidence 4455444 2222333377776644332111 111 12233333344444444431 233 688764 899999999999
Q ss_pred ccCC-CCeEEEcCCCchhH-HH-HHHHcCC-EEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 190 LINP-GDEVILFAPFYDSY-EA-TLSMAGA-KIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 190 l~~~-gd~Vlv~~p~y~~~-~~-~~~~~G~-~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
++++ ++.|+. .-.|+.- .. +.+..|+ +++.++.++ +..+|++.++ . ++.|.+++..|.||...+ ++
T Consensus 87 l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~-g~~~d~~~i~----~-~~~V~~~h~~t~tG~~~p---i~ 156 (378)
T PRK03080 87 LLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADY-GSLPDLSAVD----F-DRDVVFTWNGTTTGVRVP---VA 156 (378)
T ss_pred cCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCC-CCCCCHhhcC----C-CCCEEEEecCCccceecc---ch
Confidence 9875 445544 4444442 22 2356788 888887763 5567777643 2 567888899999999996 45
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcc-ccceeeeEEeChhhHHHHHHHh----
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSL-TGWKIGWAIAPPHLTWGVRQAH---- 340 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~G~R~G~~~~~~~~~~~l~~~~---- 340 (434)
+|++ +++|+++|+|.++.... ....+.. -.+++.|..|.++. +| +|+++.+++.++++....
T Consensus 157 ~I~~--~~~g~~~vVDa~qs~G~---~pidv~~------iD~~~~s~~K~l~~P~G--~g~l~v~~~~~~~~~p~~~~~~ 223 (378)
T PRK03080 157 RWIG--ADREGLTICDATSAAFA---LPLDWSK------LDVYTFSWQKVLGGEGG--HGMAILSPRAVERLESYTPARP 223 (378)
T ss_pred hhcc--ccCCCeEEEeccccccc---CCCCHHH------CcEEEEehhhhCCCCCc--eEEEEECHHHHHhhhcccCCCC
Confidence 5666 78899999999987643 2222222 24788899999863 55 899999998887765321
Q ss_pred ----------------hcc--c-cCCchHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHhhhCC-CEeec--C--
Q 013883 341 ----------------SFL--T-FATSTPMQWAATAALRAPET--YYEELKRDYSAKKAILVEGLNAVG-FKVFP--S-- 394 (434)
Q Consensus 341 ----------------~~~--~-~~~~~~~q~a~~~~L~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~--~-- 394 (434)
... + .+++.....++..+|+...+ .++++.++.+++.+++++.|++++ +.+.. +
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~ 303 (378)
T PRK03080 224 IPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPAT 303 (378)
T ss_pred CchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccc
Confidence 001 1 22333344444555554322 367778888889999999999886 45542 1
Q ss_pred CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 395 SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
.++..+.+.++......+.++..+|+++ ||.+..|.
T Consensus 304 ~s~~i~~~~~~~~~~~~~~~~~~~l~~~-~i~v~~g~ 339 (378)
T PRK03080 304 RSNTSVTLDFVDAQAAVDAAAVAKLLRE-NGAVDIEP 339 (378)
T ss_pred cCccEEEEEcCCchHHHHHHHHHHHHHc-CCeecccc
Confidence 1222333333210000134567777665 88887653
No 340
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.52 E-value=2.2e-12 Score=130.01 Aligned_cols=297 Identities=19% Similarity=0.184 Sum_probs=164.4
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|. ..+. .+|.+.+++.+++++... |... .+.+..+++.+.+.... .+ .+++++++++|++
T Consensus 47 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-~~~~---~~~~~~la~~l~~~~p~---~~-~v~f~~sGseA~e 118 (431)
T PRK06209 47 GNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN-FTRP---SAIELDAAESFLELIDG---AD-MVKFCKNGSDATS 118 (431)
T ss_pred CCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC-CCCC---CHHHHHHHHHHHHhCCc---cc-eEEEecCHHHHHH
Confidence 33578887663 2222 367899999999887532 3221 23333455555543321 24 7999999999999
Q ss_pred HHHHHccC-CC-CeEEEc-CCCchhHHHHHH-----HcCCE------EEEEEcCCCCCCCCHHHHHhhccc---CCcEEE
Q 013883 185 ATILGLIN-PG-DEVILF-APFYDSYEATLS-----MAGAK------IKCITLRPPDFAIPIEELKSTISK---NTRAIL 247 (434)
Q Consensus 185 ~~~~~l~~-~g-d~Vlv~-~p~y~~~~~~~~-----~~G~~------~~~v~~~~~~~~~d~~~l~~~i~~---~~~~i~ 247 (434)
.+++.... .| ..|+.. .-.|+++..... ..|.. +..+++ -|++.+++.+.. +..+|+
T Consensus 119 ~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~~~~aavi 192 (431)
T PRK06209 119 AAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRY------NDIASLEALFEDHPGRIACVI 192 (431)
T ss_pred HHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCC------CCHHHHHHHHHhCCCCEEEEE
Confidence 99875431 23 345544 233332111100 01110 111111 278889988853 344555
Q ss_pred ecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccC-CCCCCCceEEEccCChhhccccceeeeE
Q 013883 248 MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIAS-LPGMYERTVTMNSLGKTFSLTGWKIGWA 326 (434)
Q Consensus 248 ~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~g~~G~R~G~~ 326 (434)
+ .|. .|...+.+.+++|.++|++||+++|+||++.++...+. .... +.-.+| +.+++|.+| .|+.+|++
T Consensus 193 ~-Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~--g~~~~~gv~PD----i~t~gK~lg-gG~p~~av 262 (431)
T PRK06209 193 L-EPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMR--GAQKLYGIVPD----LSCFGKALG-NGFAVSAL 262 (431)
T ss_pred E-ccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcc--hhhHHhCCCcc----eeeehhhhc-CCcccEEE
Confidence 5 442 35577888999999999999999999999987744321 1111 111233 577999999 78999999
Q ss_pred EeChhhHHH--HHHH---h---hccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEe-ecCC
Q 013883 327 IAPPHLTWG--VRQA---H---SFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKV-FPSS 395 (434)
Q Consensus 327 ~~~~~~~~~--l~~~---~---~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~ 395 (434)
++++++.+. +... . ...+++.++....++.+.|+.. ++.++++.+.-+..++.+.+...+.++.. +...
T Consensus 263 ~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~ 342 (431)
T PRK06209 263 AGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVS 342 (431)
T ss_pred EEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEee
Confidence 999988875 2111 1 1235566667777777766642 22344444444444444444444455543 2223
Q ss_pred eeEEEeeec--CCCCCCC---HHHHHHHHHHhcCeEEEC
Q 013883 396 GTYFVVVDH--TPFGHET---DIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 396 ~~~~~~~~~--~~~~~~~---~~~~~~~Ll~~~GV~v~p 429 (434)
|.++.+.-+ .+.+... ...+.+++++ .||++.|
T Consensus 343 G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~p~ 380 (431)
T PRK06209 343 GRPCCLTYSTLDGNGQPSQAFRTLFLQETIR-RGVLMPS 380 (431)
T ss_pred cceEEEEEecCCcccCCcHHHHHHHHHHHHH-CCccccc
Confidence 333322211 1111111 1145566665 4998744
No 341
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.51 E-value=5.6e-12 Score=127.29 Aligned_cols=309 Identities=13% Similarity=0.083 Sum_probs=168.3
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHH--HHHHHHHcCCCCCCCC-CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKD--AAIQAIRDGKNQYARG-HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~--~~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
+...||+..|. ..+. .+|.+.+ ++.+++.+........ .-..+....+++.+.+..+. -..+ .++++++++|
T Consensus 44 G~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p-~~~~-~v~f~~SGsE 121 (443)
T PRK08297 44 GRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGD-PELP-HLFFVDGGAL 121 (443)
T ss_pred CCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCC-CCCC-EEEEeCchHH
Confidence 34567776552 1222 3566777 7877775421111010 01123334455555443311 1124 7999999999
Q ss_pred HHHHHHHHcc----------C---C-CCeEEEcCCCchhHHHHHHHc-CCEE-E----------EEEcCCC-----CCC-
Q 013883 182 AIAATILGLI----------N---P-GDEVILFAPFYDSYEATLSMA-GAKI-K----------CITLRPP-----DFA- 229 (434)
Q Consensus 182 ai~~~~~~l~----------~---~-gd~Vlv~~p~y~~~~~~~~~~-G~~~-~----------~v~~~~~-----~~~- 229 (434)
|++.+++... . + ..+|+.....|++........ |... . .++.... ...
T Consensus 122 Ave~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (443)
T PRK08297 122 AVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDL 201 (443)
T ss_pred HHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCccccc
Confidence 9999988652 1 1 257999999998866544332 2110 0 0110000 000
Q ss_pred --------CCHHHHHhhcc---cCCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCcccc
Q 013883 230 --------IPIEELKSTIS---KNTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIA 297 (434)
Q Consensus 230 --------~d~~~l~~~i~---~~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~ 297 (434)
-+++.+++.+. .++.+|++.......|. .++++.+++|.++|++||+++|.||++.+|...|......
T Consensus 202 ~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~ 281 (443)
T PRK08297 202 EEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQ 281 (443)
T ss_pred chhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHH
Confidence 02455566664 35566666544555566 4677889999999999999999999999986665544333
Q ss_pred CCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHH-----HhhccccCCchHHHHHHHHHHhCC--hHHHHHHH
Q 013883 298 SLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQ-----AHSFLTFATSTPMQWAATAALRAP--ETYYEELK 370 (434)
Q Consensus 298 ~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~-----~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~ 370 (434)
.+.-.+| +.+|+|.+++ .|.+ +..++.+.... .....+++.++.+..++.+.|+.. ++.+++..
T Consensus 282 ~~gv~PD----iv~~gK~l~~----~a~l-~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~ 352 (443)
T PRK08297 282 QLGVRPD----IVAFGKKTQV----CGIM-AGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAA 352 (443)
T ss_pred hcCCCCC----EEEecccccc----ccee-cchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3332344 3468998752 2444 33333221111 113457778888888888888742 22333333
Q ss_pred HHHHHHHHHHHHHhhhCC-CE-eecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 371 RDYSAKKAILVEGLNAVG-FK-VFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 371 ~~~~~~~~~l~~~L~~~g-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.-+..++.+.+..++.+ +. .+...|. ++.+.+... .....++..|++ +||++.|+.
T Consensus 353 ~~g~~l~~~L~~l~~~~~~~~~~vrg~G~-~~~i~~~~~--~~~~~~~~~l~~-~Gvl~~~~~ 411 (443)
T PRK08297 353 RQGEYLLARLEELAAEFPAVVSNVRGRGL-MCAFDLPTT--ADRDEVIRRLWE-EGVLVLPCG 411 (443)
T ss_pred HHHHHHHHHHHHHHHHCCCcceeeeccce-EEEEEecCH--HHHHHHHHHHHH-CCEEEecCC
Confidence 333333333333333333 21 2344444 445555321 123467777775 599999854
No 342
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.51 E-value=4.1e-12 Score=120.52 Aligned_cols=270 Identities=16% Similarity=0.110 Sum_probs=183.5
Q ss_pred cCCeeEeCCCC-C---CCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 108 KHGAINLGQGF-P---NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 108 ~~~~i~l~~g~-p---~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+...||+..+. + +. ..|++.+++.+.+....+...+..-. +.. .+++.+.+..+- -+.+ .|++.+++++|+
T Consensus 55 g~EyiD~~ssw~~~~~Gh-anpev~ral~~q~~k~~hs~~~~~t~-eav-~l~~~l~~~~~~-~~~~-rvff~nsGTeAn 129 (433)
T KOG1401|consen 55 GKEYIDFTSSWAVTILGH-ANPEVARALAEQAKKLGHSSNGYFTL-EAV-ELEEVLSAVLGK-GSAE-RVFFCNSGTEAN 129 (433)
T ss_pred cceeeeeccceeccccCC-CCHHHHHHHHHHHhhheeccCccccH-HHH-HHHHHHHhcccC-CCcc-EEEEecCCcHHH
Confidence 34678887762 2 23 36778888877776643332222222 222 233333333222 2566 799999999999
Q ss_pred HHHHHHccC------CCC--eEEEcCCCchhHHHH-HHHcCCEEEEEEcCC--CC----CCCCHHHHHhhcccCC---cE
Q 013883 184 AATILGLIN------PGD--EVILFAPFYDSYEAT-LSMAGAKIKCITLRP--PD----FAIPIEELKSTISKNT---RA 245 (434)
Q Consensus 184 ~~~~~~l~~------~gd--~Vlv~~p~y~~~~~~-~~~~G~~~~~v~~~~--~~----~~~d~~~l~~~i~~~~---~~ 245 (434)
..++....+ +-+ .++....+|++.... +...+-.....|.++ ++ .--|...+++.++.+. .+
T Consensus 130 e~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaA 209 (433)
T KOG1401|consen 130 ETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAA 209 (433)
T ss_pred HHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEE
Confidence 998876532 112 388888888775433 222232222233221 11 1126888999887754 66
Q ss_pred EEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceee
Q 013883 246 ILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIG 324 (434)
Q Consensus 246 i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G 324 (434)
||+...+--.|..+ ++|.+..|..+|+++|+++|.||++.+|..-+..+....+...+| |.++.|.++ .|+.+|
T Consensus 210 VIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD----I~t~aK~L~-gGlPig 284 (433)
T KOG1401|consen 210 VIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD----ITTVAKPLG-GGLPIG 284 (433)
T ss_pred EEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCc----ceeehhhcc-CCceeE
Confidence 66655576777744 667799999999999999999999999887766555554544455 778999999 999999
Q ss_pred eEEeChhhHHHHHHHhh---ccccCCchHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 325 WAIAPPHLTWGVRQAHS---FLTFATSTPMQWAATAALRA--PETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 325 ~~~~~~~~~~~l~~~~~---~~~~~~~~~~q~a~~~~L~~--~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
..+++.++.+.+..-.. ..+|+.++++..++...|+. ..++++++...-+..|+.+.+.+.+.
T Consensus 285 A~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~ 352 (433)
T KOG1401|consen 285 ATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKT 352 (433)
T ss_pred EEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999988764433 56889999999999888876 25678888888888888888888775
No 343
>PLN02263 serine decarboxylase
Probab=99.49 E-value=5.1e-11 Score=118.88 Aligned_cols=247 Identities=13% Similarity=0.019 Sum_probs=169.2
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccC--CCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLIN--PGDEVILFAPFYDSYEATLSMAGAKIKCITLR 224 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~ 224 (434)
+..++++.+.+++.+..|.+-+.. .=++|+|+++++..++.+..+ +...|++++-+|.....++..+|++++.||.+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~-~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCC-eEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC
Confidence 457899999999999988643221 347799999999888776643 33478889999999999999999999999997
Q ss_pred CCCCCCCHHHHHhhcccCC---cEEEecCCCCCcccCCCHHHHHHHHHHHHHcCc-----EEEEcCcCCccccCC-CCcc
Q 013883 225 PPDFAIPIEELKSTISKNT---RAILMNTPHNPTGKMFTREELNVIASLCIENDV-----LVFSDEVYDKLAFEM-DHIS 295 (434)
Q Consensus 225 ~~~~~~d~~~l~~~i~~~~---~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~-----~iI~Deay~~~~~~~-~~~~ 295 (434)
+ ++.+|++.|+++|.+++ .+|+.+...-++|.+= ++++|.++|+++|+ |+.+|.||+++..-- +...
T Consensus 209 ~-~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiD---pi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~ 284 (470)
T PLN02263 209 V-SGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVD---DLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP 284 (470)
T ss_pred C-CCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCC---CHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence 4 78999999999997643 3444566788999875 46778888999986 999999998875410 1111
Q ss_pred ccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc-----ccCCchHH--HHHHHHHHhC-ChHHHH
Q 013883 296 IASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL-----TFATSTPM--QWAATAALRA-PETYYE 367 (434)
Q Consensus 296 ~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~-----~~~~~~~~--q~a~~~~L~~-~~~~~~ 367 (434)
...+. ..-.=+..+..|.++ .-+..|++..+...++.+.....+. +...+... ...+-..|+. +.+.++
T Consensus 285 ~~df~--~~vDSIsvD~HK~l~-~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~ 361 (470)
T PLN02263 285 KVTFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQ 361 (470)
T ss_pred ccCCC--cCccEEEECCccccC-CCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHH
Confidence 11111 112224557889887 5678999998866543332111111 11112111 2222233333 456778
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCEee-cCCeeEEEe
Q 013883 368 ELKRDYSAKKAILVEGLNAVGFKVF-PSSGTYFVV 401 (434)
Q Consensus 368 ~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~ 401 (434)
+..++..++.+++.+.|++.|+... .|.....+|
T Consensus 362 ~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f 396 (470)
T PLN02263 362 KEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVF 396 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEE
Confidence 8888888999999999999887654 455554444
No 344
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.47 E-value=1e-11 Score=132.35 Aligned_cols=311 Identities=14% Similarity=0.050 Sum_probs=184.1
Q ss_pred CeeEeCCC--CCCCC--CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 110 GAINLGQG--FPNFD--GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 110 ~~i~l~~g--~p~~~--~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
..+|+..| .-.+. ..|.+.+++.+++.+..+...+... .+....+++.|.+..+.. ..+ .+++++++++|++.
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~-hepa~~LAe~L~~~~~~~-~l~-rVffs~sGSeAvE~ 442 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFPENV-HEPALRAAELLLGGPGKG-WAS-RVFFSDNGSTAIEV 442 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccCccC-CHHHHHHHHHHHhccCCC-CCC-EEEECCchHHHHHH
Confidence 35666554 22233 4788999999988774332222222 344555777776422211 123 79999999999998
Q ss_pred HHHHccC---------------------CCCeEEEcCCCchhHHHHHHHcCCE---------E------EEE--EcC---
Q 013883 186 TILGLIN---------------------PGDEVILFAPFYDSYEATLSMAGAK---------I------KCI--TLR--- 224 (434)
Q Consensus 186 ~~~~l~~---------------------~gd~Vlv~~p~y~~~~~~~~~~G~~---------~------~~v--~~~--- 224 (434)
+++...+ ...+|+.....|++.......++.. . ..+ |..
T Consensus 443 AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~ 522 (817)
T PLN02974 443 ALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMR 522 (817)
T ss_pred HHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccc
Confidence 8775521 1246888888888743332222210 0 001 100
Q ss_pred --------CCC-----------CC-----CC------------HHHHHhhcc--------cCCcEEEecCC-CCCcccCC
Q 013883 225 --------PPD-----------FA-----IP------------IEELKSTIS--------KNTRAILMNTP-HNPTGKMF 259 (434)
Q Consensus 225 --------~~~-----------~~-----~d------------~~~l~~~i~--------~~~~~i~~~~p-~NPTG~~~ 259 (434)
+.. +. .| .+.+++.+. ++..+|++... +.-.|+++
T Consensus 523 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~ 602 (817)
T PLN02974 523 NGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLL 602 (817)
T ss_pred cccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCccc
Confidence 000 00 00 244555553 13455555442 57778865
Q ss_pred -CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc-ceeeeEEeChhhHHHHH
Q 013883 260 -TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVR 337 (434)
Q Consensus 260 -~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~ 337 (434)
+++.+++|.++|++||+++|+||++.+|...|.......+.-.+| +.+++|.++ .| +.+|.+++++++.+.+.
T Consensus 603 ~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PD----Ii~~gKgLt-gG~~Plaa~l~~~~I~~~f~ 677 (817)
T PLN02974 603 IDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPD----IACYAKLLT-GGLVPLAATLATEEVFEAFR 677 (817)
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCC----EEeeccccc-CCCCccEEEEEcHHHHHhhc
Confidence 677799999999999999999999999987776555544443445 667999998 89 59999999999988774
Q ss_pred H------HhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHh----hhCC-CEeecCCeeEEEeeec
Q 013883 338 Q------AHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGL----NAVG-FKVFPSSGTYFVVVDH 404 (434)
Q Consensus 338 ~------~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L----~~~g-~~~~~~~~~~~~~~~~ 404 (434)
. .....+|+.++.+.+++.+.|+.. ++..+++.+..++..+.+.+.| .+.. +.-+... |+++-+.+
T Consensus 678 ~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~-Gl~~~iel 756 (817)
T PLN02974 678 GPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSL-GTVLALEL 756 (817)
T ss_pred cccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEee-eeEEEEEE
Confidence 2 113357888999988888877642 2223344444444444444444 3332 2222333 44444544
Q ss_pred CCCCC------CCHHHHHHHHHHhcCeEEEC
Q 013883 405 TPFGH------ETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 405 ~~~~~------~~~~~~~~~Ll~~~GV~v~p 429 (434)
..... .-...+.++++.+.||+++|
T Consensus 757 ~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~ 787 (817)
T PLN02974 757 DAEGSGSGYSSLYARSVVRRLRREDGIYARP 787 (817)
T ss_pred ecCCcccccchHHHHHHHHHHHHhCCEEEEe
Confidence 32110 01235666676356999998
No 345
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.46 E-value=1.9e-11 Score=130.44 Aligned_cols=271 Identities=14% Similarity=0.110 Sum_probs=175.5
Q ss_pred CCCCCCC---CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc--------CCCCeEEEcCCCchhH
Q 013883 139 KNQYARG---HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI--------NPGDEVILFAPFYDSY 207 (434)
Q Consensus 139 ~~~Y~~~---~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~--------~~gd~Vlv~~p~y~~~ 207 (434)
.+.|.|. +|..++...+.+++.+..|.+ .. .+. .+|+..+-...+.++. ...++|+++.-.++..
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd--~~-Sl~-p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtn 591 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD--AI-SLQ-PNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTN 591 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC--Cc-ccC-CchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcC
Confidence 3456554 567788888888888888875 22 233 3444444433333322 1235788998888666
Q ss_pred HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcC
Q 013883 208 EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284 (434)
Q Consensus 208 ~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay 284 (434)
...+...|++++.++.+ +++.+|+++|++++++ ++++|++++|+| +|..-+ ++++|+++|+++|.++++|.++
T Consensus 592 Pasa~~~G~~Vv~V~~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgAq 667 (939)
T TIGR00461 592 PASAAMAGMQVVPVNCD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGAN 667 (939)
T ss_pred HHHHHHCCCEEEEeccC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEecC
Confidence 66688899999999987 4789999999999974 889999999999 787653 3888999999999999999998
Q ss_pred CccccCCCCccccCCCCCCCceEEEccCChhhc----cccceeeeEEeChhhHHHHHH--H-------------hhccc-
Q 013883 285 DKLAFEMDHISIASLPGMYERTVTMNSLGKTFS----LTGWKIGWAIAPPHLTWGVRQ--A-------------HSFLT- 344 (434)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g----~~G~R~G~~~~~~~~~~~l~~--~-------------~~~~~- 344 (434)
..-.. ...-++..+-.++..|..|.|+ ..|.-+|++.+.+++...+-. + .....
T Consensus 668 ~~al~------~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~ 741 (939)
T TIGR00461 668 MNAQV------GLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAA 741 (939)
T ss_pred hhhCC------CCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCcccccccccc
Confidence 54111 1111223345688888899664 356668999988765543310 0 00000
Q ss_pred cCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecC-CeeE-E--EeeecCCC----CCCCHHHH
Q 013883 345 FATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPS-SGTY-F--VVVDHTPF----GHETDIAF 415 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~-~--~~~~~~~~----~~~~~~~~ 415 (434)
...+......+..+|.. +.+.++++.+....+.+++.+.|++ ++++.-+ ..+. + +.+++.+. +. +..++
T Consensus 742 ~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~-~~~dI 819 (939)
T TIGR00461 742 PYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGI-EAIDV 819 (939)
T ss_pred ccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCC-CHHHH
Confidence 01111122333333333 4567888888888899999999987 4554322 2222 2 23444422 22 57889
Q ss_pred HHHHHHhcCeE
Q 013883 416 CEYLIKEVGVV 426 (434)
Q Consensus 416 ~~~Ll~~~GV~ 426 (434)
+++|++. |+.
T Consensus 820 akrL~d~-G~h 829 (939)
T TIGR00461 820 AKRLQDY-GFH 829 (939)
T ss_pred HHHHHhC-Cee
Confidence 9999865 886
No 346
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.46 E-value=8.5e-12 Score=125.73 Aligned_cols=308 Identities=13% Similarity=0.099 Sum_probs=165.9
Q ss_pred CCeeEeCCCCC--CCC-CcHHHH--HHHHHHHHcCCCCC-CC-CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVK--DAAIQAIRDGKNQY-AR-GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~--~~~~~~~~~~~~~Y-~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
...|||..|.- .+. .+|.+. +++.+++.+....+ .. .....+ ...+++.+.+..+. -..+ .+++++++++
T Consensus 38 ~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~-~~~~-~v~f~~sGsE 114 (431)
T TIGR03251 38 RRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVA-MARFVDTFARVLGD-PALP-HLFFIEGGAL 114 (431)
T ss_pred CChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHH-HHHHHHHHHHhcCC-CCcC-EEEEeCCcHH
Confidence 35566655522 122 245566 78888776532111 11 112222 33444444433211 1224 7999999999
Q ss_pred HHHHHHHHccC--------------CCCeEEEcCCCchhHHHHHHHc-CCE-EEE------------EE-----cCCCCC
Q 013883 182 AIAATILGLIN--------------PGDEVILFAPFYDSYEATLSMA-GAK-IKC------------IT-----LRPPDF 228 (434)
Q Consensus 182 ai~~~~~~l~~--------------~gd~Vlv~~p~y~~~~~~~~~~-G~~-~~~------------v~-----~~~~~~ 228 (434)
|++.+++.... .+.+|+...-.|++........ |.. ... .| ++.+..
T Consensus 115 Ave~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 194 (431)
T TIGR03251 115 AVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNL 194 (431)
T ss_pred HHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccccc
Confidence 99999876521 1367999998888865443322 211 000 11 000000
Q ss_pred C-------CCHHHHHhhcc---cCCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCcccc
Q 013883 229 A-------IPIEELKSTIS---KNTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIA 297 (434)
Q Consensus 229 ~-------~d~~~l~~~i~---~~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~ 297 (434)
. -+++.+++.+. .++.++++.....-.|.. ++++.+++|.++|++||+++|+||++.+|...|......
T Consensus 195 ~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~ 274 (431)
T TIGR03251 195 DQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQ 274 (431)
T ss_pred chhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHH
Confidence 0 12444555553 356777776556667775 577889999999999999999999999887665443333
Q ss_pred CCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHH-----HhhccccCCchHHHHHHHHHHhCC--hHHHHHHH
Q 013883 298 SLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQ-----AHSFLTFATSTPMQWAATAALRAP--ETYYEELK 370 (434)
Q Consensus 298 ~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~-----~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~ 370 (434)
.+.-.+| +-+++|.+. . .|++... ++.+.... .....+++.++....++.+.|+.. ++.+++++
T Consensus 275 ~~gv~PD----i~~~gK~~~--~--~g~~~~~-~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~ 345 (431)
T TIGR03251 275 QLGVQPD----IVAFGKKTQ--V--CGIMAGR-RVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNAR 345 (431)
T ss_pred hcCCCCC----EEEecccCc--c--ceEEecc-hHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3322334 335788862 2 3555443 32111110 112346777888888888877752 22233444
Q ss_pred HHHHHHHHHHHHHhhhCC-CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 371 RDYSAKKAILVEGLNAVG-FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 371 ~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.-+..++.|.+..++.+ +......-|.++.+.+.. ......+.+.|++ +||++.|..
T Consensus 346 ~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~--~~~~~~~~~~l~~-~Gvl~~~~g 404 (431)
T TIGR03251 346 VQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS--TADRDEVIRQLYR-EGVLLLGCG 404 (431)
T ss_pred HHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC--HHHHHHHHHHHHh-CCeEEecCC
Confidence 444444444444333333 322222224444555522 1123457777765 599998853
No 347
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=2.6e-12 Score=122.91 Aligned_cols=261 Identities=13% Similarity=0.171 Sum_probs=175.1
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP 226 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~ 226 (434)
|..++.+.+.++..++.|. ++ .+++.-| .......+..++.||.-|+-..-.+......++..|+.++.+..+
T Consensus 179 G~~~~hkelE~l~A~f~g~---e~-a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-- 251 (519)
T KOG1357|consen 179 GTTEEHKELEELVARFLGV---ED-AIVFSMG-FATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN-- 251 (519)
T ss_pred ccHHHHHHHHHHHHHhcCC---cc-eEEEecc-ccccccCcceeecCCcceeeccccchheeccccccCceEEEEecC--
Confidence 4444555555555544443 34 6888777 666666788899999999999999999999999999999988876
Q ss_pred CCCCCHHHHHhhccc-------CC-----cEEE-ecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC
Q 013883 227 DFAIPIEELKSTISK-------NT-----RAIL-MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDH 293 (434)
Q Consensus 227 ~~~~d~~~l~~~i~~-------~~-----~~i~-~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~ 293 (434)
|..+||+.+++ ++ |.++ +..-...-|.+. .+.+++++++++..+++.||+++..+.+...
T Consensus 252 ----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv---~Lp~vvalkkkykayl~lDEAHSiGA~g~tG 324 (519)
T KOG1357|consen 252 ----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIV---DLPEVVALKKKYKAYLYLDEAHSIGAMGATG 324 (519)
T ss_pred ----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeec---ccHHHHHhhccccEEEEeeccccccccCCCC
Confidence 46666665532 11 3333 334455566665 5778999999999999999999987665433
Q ss_pred ccccCC--CCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcccc---CCchHHHHHHHHHHhC-----Ch
Q 013883 294 ISIASL--PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTF---ATSTPMQWAATAALRA-----PE 363 (434)
Q Consensus 294 ~~~~~~--~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~---~~~~~~q~a~~~~L~~-----~~ 363 (434)
...-.+ .+..+..|++++|.|.+|..| ||+.+++++++.++.......+ -+++..|.. ...|+. ..
T Consensus 325 rgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s~~~~yat~~sppvaqq~-~ssl~~i~G~dgt 400 (519)
T KOG1357|consen 325 RGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSPSALYATSLSPPVAQQI-LTSVKHIMGEDGT 400 (519)
T ss_pred cceeeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhccCCCceeecccCChHHHHHH-HHHHHhhcCCCcc
Confidence 333333 223456788999999999777 9999999999988765443322 233333433 333332 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 364 TYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 364 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
+..++..+++++++.+++..|++.|+-++.......+-+-+-... .-.++.+.|+++ +|.++
T Consensus 401 ~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpVvplll~~~~--k~~~f~r~~l~~-nigvV 462 (519)
T KOG1357|consen 401 NRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPVVPLLLYGPA--KIVAFSREMLER-NIGVV 462 (519)
T ss_pred cHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCcceeeecCcc--cccHHHHHHHhc-CceEE
Confidence 456777889999999999999999999887665533222211111 233677677765 55443
No 348
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.46 E-value=1.9e-11 Score=115.20 Aligned_cols=294 Identities=18% Similarity=0.181 Sum_probs=181.5
Q ss_pred cHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc--CCCCeEE
Q 013883 124 PDFVKDAAIQAIRDG---KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI--NPGDEVI 198 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~--~~gd~Vl 198 (434)
.|.+.+++.+++..- ...|... -+.+|-+++++.+- -+-+ .++++|+++||.+++++... ...-.++
T Consensus 68 hP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~P------~~l~-~vfF~nsGsEANelal~mar~Yt~~~diI 139 (442)
T KOG1404|consen 68 HPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKLP------GDLK-VVFFVNSGSEANELALKMARLYTGNLDII 139 (442)
T ss_pred ChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhCC------CCce-EEEEecCCchHHHHHHHHHHHhcCCceEE
Confidence 345777887777542 2344443 24566666666553 1123 68999999999999987653 2223455
Q ss_pred EcCCCchhHH-HHHHHcCCEEEEEEcCC----------CC-----CCCC---------HHHHHhhc---ccCCcEEEecC
Q 013883 199 LFAPFYDSYE-ATLSMAGAKIKCITLRP----------PD-----FAIP---------IEELKSTI---SKNTRAILMNT 250 (434)
Q Consensus 199 v~~p~y~~~~-~~~~~~G~~~~~v~~~~----------~~-----~~~d---------~~~l~~~i---~~~~~~i~~~~ 250 (434)
-...+|++.. ..+..-|......++.. ++ ++=+ .+.+++.+ .+++.+-++..
T Consensus 140 a~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaE 219 (442)
T KOG1404|consen 140 ARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAE 219 (442)
T ss_pred EeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEee
Confidence 5566666543 33333443332222211 00 0000 13333333 23455555554
Q ss_pred C-CCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEe
Q 013883 251 P-HNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 328 (434)
Q Consensus 251 p-~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~ 328 (434)
+ +.--|+ .+++-.+++..++|+++|.+.|.||++.+|...|..+.+.+..-.+ -|.|++|.+| .|..+|.++.
T Consensus 220 tIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~P----DIvTmAKgiG-nG~Pl~AVvt 294 (442)
T KOG1404|consen 220 TIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVP----DIVTMAKGIG-NGFPLGAVVT 294 (442)
T ss_pred hhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCc----cHHHHHhhcc-CCCcceeeec
Confidence 4 555565 4566779999999999999999999999998887555554433333 4889999999 9999999999
Q ss_pred ChhhHHHHHHHh-hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--CCEee--cCCeeEEEeee
Q 013883 329 PPHLTWGVRQAH-SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV--GFKVF--PSSGTYFVVVD 403 (434)
Q Consensus 329 ~~~~~~~l~~~~-~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~--~~~~~~~~~~~ 403 (434)
.+++.+-+.+.. .+.+++.++.+..++.++|+-.+ -+++.++..+.-.+|.+.|.++ +.+.+ ...-|.++=+.
T Consensus 295 t~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vik--ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE 372 (442)
T KOG1404|consen 295 TPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIK--EENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVE 372 (442)
T ss_pred CHHHHHHHHhccccccccCCCchhHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEE
Confidence 999999887766 67789999999999988888632 2445566666677777777664 23332 22223333332
Q ss_pred cC-----CCC--CCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 404 HT-----PFG--HETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 404 ~~-----~~~--~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+. +.. ......+.++. ++.||.|--|..+
T Consensus 373 ~V~dk~~~~pp~~~~~~~i~~~c-ke~Gvlvg~g~i~ 408 (442)
T KOG1404|consen 373 LVSDKSEPKPPATAEGAVIGEQC-KELGVLVGKGGIH 408 (442)
T ss_pred EecccCCCCCcchHHHHHHHHHH-HHhCeeeeccccc
Confidence 21 111 11122344455 5679999766654
No 349
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.46 E-value=5.4e-12 Score=118.38 Aligned_cols=155 Identities=20% Similarity=0.278 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhH----HHHHHHcCCEEEEEEcC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY----EATLSMAGAKIKCITLR 224 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~ 224 (434)
..|.+.++.+-+. . .-+.+.+++.|+..++..++++||.|+-.+--|.+. ...++.+|+++..|.-+
T Consensus 65 ~vlE~RiAaLEGG---~------aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~ 135 (426)
T COG2873 65 DVLEERIAALEGG---V------AALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD 135 (426)
T ss_pred HHHHHHHHHhhcc---h------hhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC
Confidence 4677777775542 1 234456669999999999999999999888877764 44567899999998655
Q ss_pred CCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCC
Q 013883 225 PPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYE 304 (434)
Q Consensus 225 ~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~ 304 (434)
|++.++++++++||+|++.+-.||-+.++ ++++|+++|++|++++|+|.....- .-++.+ ..+
T Consensus 136 ------d~~~~~~aI~~nTkavf~EtigNP~~~v~---Die~ia~iAh~~gvpliVDNT~atp------yl~rP~--~hG 198 (426)
T COG2873 136 ------DPENFEAAIDENTKAVFAETIGNPGLDVL---DIEAIAEIAHRHGVPLIVDNTFATP------YLCRPI--EHG 198 (426)
T ss_pred ------CHHHHHHHhCcccceEEEEeccCCCcccc---CHHHHHHHHHHcCCcEEEecCCCcc------eecchh--hcC
Confidence 68999999999999999999999999998 6778999999999999999987641 112222 245
Q ss_pred ceEEEccCChhhccccceeeeEEeC
Q 013883 305 RTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 305 ~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
-.|++.|.+|.+|-.|--+|-++.+
T Consensus 199 ADIVvHS~TK~igGhGt~iGG~iVD 223 (426)
T COG2873 199 ADIVVHSATKYIGGHGTAIGGVIVD 223 (426)
T ss_pred CCEEEEeecccccCCccccceEEEe
Confidence 5689999999998788888877753
No 350
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.45 E-value=2.3e-11 Score=118.87 Aligned_cols=294 Identities=17% Similarity=0.118 Sum_probs=186.0
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
-.|||=+..-.-.+.+..++++. .+...|........|.+.++++++ .+ .++.+..+..+-..++..
T Consensus 42 V~IDLrSDTgT~apS~~m~aAM~----~GDD~Y~gdpSv~~Lee~vael~G--------~E-~alpthqGRgaE~Il~~~ 108 (467)
T TIGR02617 42 VFIDLLTDSGTGAVTQSMQAAMM----RGDEAYSGSRSYYALAESVKNIFG--------YQ-YTIPTHQGRGAEQIYIPV 108 (467)
T ss_pred eEEECccCCCCCCCCHHHHHHHH----cCCcccccCchHHHHHHHHHHHhC--------Cc-eEEECCCCchHHHHHHHh
Confidence 45777544322223444554443 366678887778899999999987 44 677787778898888999
Q ss_pred ccC-CCCeEEEcCC-------Cchh-HHHHHHHcCCEEEEEEcC--------C-CCCCCCHHHHHhhccc----CCcEEE
Q 013883 190 LIN-PGDEVILFAP-------FYDS-YEATLSMAGAKIKCITLR--------P-PDFAIPIEELKSTISK----NTRAIL 247 (434)
Q Consensus 190 l~~-~gd~Vlv~~p-------~y~~-~~~~~~~~G~~~~~v~~~--------~-~~~~~d~~~l~~~i~~----~~~~i~ 247 (434)
+++ |||++.+..+ .++. ....+...|+.++.++.+ . .++.+|++.++++|++ +.-.+.
T Consensus 109 ~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~ 188 (467)
T TIGR02617 109 LIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIV 188 (467)
T ss_pred hcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeee
Confidence 988 7887775443 3332 345677889888876432 1 2478999999999985 222222
Q ss_pred ecCCCC-CcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCcc-c-c------CCCCccccCCC----CCCCceEEEccCCh
Q 013883 248 MNTPHN-PTGKMFTREELNVIASLCIENDVLVFSDEVYDKL-A-F------EMDHISIASLP----GMYERTVTMNSLGK 314 (434)
Q Consensus 248 ~~~p~N-PTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~-~-~------~~~~~~~~~~~----~~~~~~i~i~S~SK 314 (434)
..--+| --|.++|.+.++++.++|++||+.++.|.+--.- . | .-...++..+. ... ..+..|+||
T Consensus 189 ~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~a--Dsvt~slsK 266 (467)
T TIGR02617 189 ATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYA--DMLAMSAKK 266 (467)
T ss_pred eeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccC--CEEEEEcCC
Confidence 111133 3588999999999999999999999999863220 1 1 00122222221 111 256679999
Q ss_pred hhccc-cceeeeEEeChh-hHHHHHHHhh-------cccc-CCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHH
Q 013883 315 TFSLT-GWKIGWAIAPPH-LTWGVRQAHS-------FLTF-ATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVE 382 (434)
Q Consensus 315 ~~g~~-G~R~G~~~~~~~-~~~~l~~~~~-------~~~~-~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~ 382 (434)
.+|.| | |+++++++ +.+.+++.+. +.++ +.+.--..+++.-|.+. ++|++.. ....++|.+
T Consensus 267 glgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~r----i~qv~yl~~ 339 (467)
T TIGR02617 267 DAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYR----INQVQYLVN 339 (467)
T ss_pred CCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHH----HHHHHHHHH
Confidence 99866 4 67777755 2222333222 1223 23333455666666653 3444433 334677888
Q ss_pred HhhhCCCEeecCCeeEEEeeecCC------CCCCCHHHHHHHHHHhcCeE
Q 013883 383 GLNAVGFKVFPSSGTYFVVVDHTP------FGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 383 ~L~~~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~Ll~~~GV~ 426 (434)
.|.+.|+++.. .||.-++++-.. ...-.+..++..|..+.||-
T Consensus 340 ~L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR 388 (467)
T TIGR02617 340 GLEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIR 388 (467)
T ss_pred HHHhCCCcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcc
Confidence 99999999988 899888886322 11224667888888888885
No 351
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.45 E-value=1.3e-11 Score=128.49 Aligned_cols=221 Identities=12% Similarity=0.089 Sum_probs=140.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCC
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPD 227 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~ 227 (434)
+.+..+.+|+.++ .++..+++||++.++..++.+++.+||.|+++..+|.+..+.+.+.|+.++.++...+.
T Consensus 197 i~eAe~~AA~~fg--------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~ 268 (714)
T PRK15400 197 HKEAEEYIARVFN--------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNA 268 (714)
T ss_pred HHHHHHHHHHHhC--------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccc
Confidence 4456666666655 44478999999999999999999999999999999999999999999999998654323
Q ss_pred C----CCC-----HHHHHhhcccC--Cc---EEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccc-cCCC
Q 013883 228 F----AIP-----IEELKSTISKN--TR---AILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA-FEMD 292 (434)
Q Consensus 228 ~----~~d-----~~~l~~~i~~~--~~---~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~-~~~~ 292 (434)
+ +++ .+.+++++... .+ ++++++| +-.|++++ +++|+++|+.++ |++||||.... |...
T Consensus 269 ~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~p~ 342 (714)
T PRK15400 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (714)
T ss_pred cCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecC---HHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence 2 345 78999988652 23 6777777 56799985 566777787777 78999997543 4332
Q ss_pred CccccCC-CCC--CCceEEEccCChhhccccce-eeeEEeChhhH-HHHHHHhhccccCCchHH----HHHHHHHHhCCh
Q 013883 293 HISIASL-PGM--YERTVTMNSLGKTFSLTGWK-IGWAIAPPHLT-WGVRQAHSFLTFATSTPM----QWAATAALRAPE 363 (434)
Q Consensus 293 ~~~~~~~-~~~--~~~~i~i~S~SK~~g~~G~R-~G~~~~~~~~~-~~l~~~~~~~~~~~~~~~----q~a~~~~L~~~~ 363 (434)
.+....+ .+. .+.+++++|..|.++ |+. .++++.+..+- ++++........+.|... ..++...++..
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKtL~--alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~- 419 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGN- 419 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhccc--chhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhh-
Confidence 1111111 111 245689999999984 443 45666644322 234433332333334333 23333444421
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Q 013883 364 TYYEELKRDYSAKKAILVEGLNA 386 (434)
Q Consensus 364 ~~~~~~~~~~~~~~~~l~~~L~~ 386 (434)
.-+++.++..++...+++.|.+
T Consensus 420 -~G~~l~~~~i~~a~~~R~~l~~ 441 (714)
T PRK15400 420 -AGKRLINGSIERAIKFRKEIKR 441 (714)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHh
Confidence 1223334444444445555544
No 352
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.44 E-value=2.1e-11 Score=126.91 Aligned_cols=169 Identities=17% Similarity=0.159 Sum_probs=120.4
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH-HHHcCCEEEEEEcCCC
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT-LSMAGAKIKCITLRPP 226 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~G~~~~~v~~~~~ 226 (434)
+.+..+.+|+.++ .++..+++||++.++..++.+++.+||.|+++..+|.+..+. +.+.|+.++++....+
T Consensus 176 i~eAq~~AA~~fg--------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n 247 (720)
T PRK13578 176 AKDAQKHAAKVFN--------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARN 247 (720)
T ss_pred HHHHHHHHHHHhC--------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeecccc
Confidence 4455666666655 344789999999999999999999999999999999998885 8999999999865432
Q ss_pred CC----CCCHHH-----HHhhcccC----------CcEEEecCCCCCcccCCCHHHHHHHHHH-HHHcCcEEEEcCcCCc
Q 013883 227 DF----AIPIEE-----LKSTISKN----------TRAILMNTPHNPTGKMFTREELNVIASL-CIENDVLVFSDEVYDK 286 (434)
Q Consensus 227 ~~----~~d~~~-----l~~~i~~~----------~~~i~~~~p~NPTG~~~~~e~l~~i~~l-a~~~~~~iI~Deay~~ 286 (434)
.+ +++.+. +++++... .+++++++| +-.|+++ ++++|+++ ++.++ .|++||||..
T Consensus 248 ~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~y---di~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 248 PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIY---NARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceee---cHHHHHHHhhccCC-cEEEeCcchh
Confidence 23 345444 88777653 478888777 4469998 46667777 67778 9999999975
Q ss_pred cc-cCCC---Cccc-cCCCCCCCceEEEccCChhhccccc-eeeeEEeChh
Q 013883 287 LA-FEMD---HISI-ASLPGMYERTVTMNSLGKTFSLTGW-KIGWAIAPPH 331 (434)
Q Consensus 287 ~~-~~~~---~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~-R~G~~~~~~~ 331 (434)
.. |... .+.. .....+..-+++++|..|.++ ++ -.++++.+.+
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~--alTQaS~LHvk~~ 371 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA--GFSQTSQIHKKDN 371 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhcch--hhhhHhhhhcCCc
Confidence 43 4331 1111 111112234689999999984 44 3568877543
No 353
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.44 E-value=1.2e-11 Score=124.68 Aligned_cols=304 Identities=13% Similarity=0.096 Sum_probs=167.2
Q ss_pred cCCeeEeCCCCCCC--C-CcHHHHHHHHHH-HHcCCCCCCCCCCcHHHHHHHHHHHH----hhcCCCCCCCCcEEEcCCh
Q 013883 108 KHGAINLGQGFPNF--D-GPDFVKDAAIQA-IRDGKNQYARGHGVPEFNSAIASRFK----KDSGLEVDPEKEVTVTSGC 179 (434)
Q Consensus 108 ~~~~i~l~~g~p~~--~-~~~~v~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~l~----~~~g~~~~~~~~i~~t~G~ 179 (434)
+...||+..|.-.. . .+|.+.+++.++ ....... .+.... +....+++.+. +.... +-+ .+++++++
T Consensus 57 G~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~-~~~~~~-~~~~~la~~l~~~l~~~~p~--~~~-~v~f~~SG 131 (464)
T TIGR00699 57 GNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLIN-RPALGN-FPSKDWAKILKEGILKVAPK--GQD-QVWTGMSG 131 (464)
T ss_pred CCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcc-cccCCc-HHHHHHHHHHHHhHHhhCCC--CcC-EEEEeCCc
Confidence 34578887763322 2 467788888874 2322111 111121 23344455443 22221 124 79999999
Q ss_pred HHHHHHHHHHccC--------------------------CC---CeEEEcCCCchhHHHHHHH-cCCE-----------E
Q 013883 180 TEAIAATILGLIN--------------------------PG---DEVILFAPFYDSYEATLSM-AGAK-----------I 218 (434)
Q Consensus 180 ~~ai~~~~~~l~~--------------------------~g---d~Vlv~~p~y~~~~~~~~~-~G~~-----------~ 218 (434)
++|++.+++.... +| .+|+....+|++....... .|.. +
T Consensus 132 sEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~ 211 (464)
T TIGR00699 132 SDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDW 211 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCc
Confidence 9999999876521 11 2699999999886544332 2211 1
Q ss_pred EEEEcCCCC--C-----------CCCHHHHHhhccc---CCcEEEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEc
Q 013883 219 KCITLRPPD--F-----------AIPIEELKSTISK---NTRAILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSD 281 (434)
Q Consensus 219 ~~v~~~~~~--~-----------~~d~~~l~~~i~~---~~~~i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~D 281 (434)
..+|+.... + .-+++.+++++.. +..+|++.......|.+. +.+.+++|.++|++||+++|+|
T Consensus 212 ~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~D 291 (464)
T TIGR00699 212 PQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVD 291 (464)
T ss_pred eecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 112221100 0 0135667777743 456677665566678766 6777999999999999999999
Q ss_pred CcCCccccCCCCccccCCCC--CCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHH
Q 013883 282 EVYDKLAFEMDHISIASLPG--MYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAAL 359 (434)
Q Consensus 282 eay~~~~~~~~~~~~~~~~~--~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L 359 (434)
|++.+|...|.......+.- .+| +.+++|.+| .| |+++..+ .+..........+++.++.+..++.+.|
T Consensus 292 EV~tGfGrtG~~fa~e~~gv~~~PD----i~t~gK~lg-~g---G~~~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L 362 (464)
T TIGR00699 292 EVQTGVGATGKFWAHEHWNLDDPPD----MVTFSKKFQ-TA---GYFFHDP-AFRPNKPYRQFNTWMGDPSRALILREII 362 (464)
T ss_pred eeeeCCCCCcchhHHHhcCCCCCCC----EEEehhhhc-cC---Cccccch-hccCCCCcccccCCCCCHHHHHHHHHHH
Confidence 99998876555433333321 133 567899996 32 4444432 1111011123357777888887777777
Q ss_pred hCChHHHHHHHHHHHHHHHHHHHHhhh----CC--CEeec-CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 360 RAPETYYEELKRDYSAKKAILVEGLNA----VG--FKVFP-SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+..++ +++.++.+++-+++.+.|++ .+ +..+. ..-|+++-+.+... .....+.+.++++ ||++.+.
T Consensus 363 ~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~--~~~~~i~~~~~~~-Gvl~~~~ 435 (464)
T TIGR00699 363 QEIKR--KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE--AKRDKLLKKARNN-GVNIGGC 435 (464)
T ss_pred HHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH--HHHHHHHHHHHHC-CcEEecC
Confidence 64211 22334444444555555544 33 11222 13344444454211 1134677777665 9999763
No 354
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.44 E-value=2.5e-11 Score=119.07 Aligned_cols=260 Identities=12% Similarity=0.040 Sum_probs=172.4
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc-CCCCeEEEcCCCchhH-H-HHHHHcCC-EEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI-NPGDEVILFAPFYDSY-E-ATLSMAGA-KIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~Vlv~~p~y~~~-~-~~~~~~G~-~~~~v~~ 223 (434)
..++.+.+.+.+.+.++.+-+.+ -++++.|++.++++++..++ ++||+|++.. .|..- . ++++..|+ ++..+..
T Consensus 37 F~~i~~e~~~~L~~l~~~~~~~~-v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~ 114 (374)
T TIGR01365 37 GKEKLAEAIKKTREMLGVPADYL-IGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEA 114 (374)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcE-EEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcC
Confidence 35666677777777777532222 46679999999999999999 5899999865 44442 4 78888999 4777765
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHH-cCcEEEEcCcCCccccCCCCccccCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE-NDVLVFSDEVYDKLAFEMDHISIASLPGM 302 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~-~~~~iI~Deay~~~~~~~~~~~~~~~~~~ 302 (434)
.+ +..+|++.++. . +.|++++....||+..+.+ +++ ++ ++.++|+|.+-+... ....+.
T Consensus 115 ~~-g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv~---~i~---~~~~~~lliVDavSs~g~---~~l~~d----- 174 (374)
T TIGR01365 115 EY-GKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPNG---DFI---PADREGLTICDATSAAFA---QDLDYH----- 174 (374)
T ss_pred CC-CCCCCHHHcCC--C---CCEEEecCCCchheecccc---ccc---cccCCCcEEEEccchhcC---CCCChh-----
Confidence 43 56778888873 1 2356666677889988753 343 33 589999999877532 222222
Q ss_pred CCceEEEccCChhhccccceeeeEEeChhhHHHHHHH-----------------------hhccccCCchHHHHHHHHHH
Q 013883 303 YERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA-----------------------HSFLTFATSTPMQWAATAAL 359 (434)
Q Consensus 303 ~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~q~a~~~~L 359 (434)
+-.+++.|--|.+++|+ .+++++.+++.+++.+.. .....++++....+++..+|
T Consensus 175 -~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l 252 (374)
T TIGR01365 175 -KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDAL 252 (374)
T ss_pred -HCcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHH
Confidence 23477888999998654 478889888877665421 11234555666677777767
Q ss_pred hCC-h-HHHHHHHHHHHHHHHHHHHHhhhCC-CEeecC----CeeEEEeeecCCCCCC----C-----HHHHHHHHHHhc
Q 013883 360 RAP-E-TYYEELKRDYSAKKAILVEGLNAVG-FKVFPS----SGTYFVVVDHTPFGHE----T-----DIAFCEYLIKEV 423 (434)
Q Consensus 360 ~~~-~-~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~----~~~~~~~~~~~~~~~~----~-----~~~~~~~Ll~~~ 423 (434)
+.. + ..++++.++++++.+.+++.++++| +.+... .......+.+...+.+ + ..++...| +++
T Consensus 253 ~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~ 331 (374)
T TIGR01365 253 KWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTL-EKE 331 (374)
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHH-HHC
Confidence 532 2 2588899999999999999999998 666542 2333333443222221 2 34565555 455
Q ss_pred CeEEECCCC
Q 013883 424 GVVAIPTSV 432 (434)
Q Consensus 424 GV~v~pG~~ 432 (434)
||.+.+|-.
T Consensus 332 gi~i~~G~~ 340 (374)
T TIGR01365 332 GVAYDIGSY 340 (374)
T ss_pred CEEEecccc
Confidence 999998753
No 355
>PLN02880 tyrosine decarboxylase
Probab=99.43 E-value=1.1e-10 Score=119.05 Aligned_cols=296 Identities=11% Similarity=0.066 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCC-----CCcEEEcCChHHHHHHHHHHccC--------
Q 013883 126 FVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDP-----EKEVTVTSGCTEAIAATILGLIN-------- 192 (434)
Q Consensus 126 ~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-----~~~i~~t~G~~~ai~~~~~~l~~-------- 192 (434)
.+.+.+..++......|....+..++++.+.+++.+..|.+-+. . .-++++|+++++..++.+..+
T Consensus 98 ~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~-gG~~tsggs~anl~al~~AR~~~~~~~g~ 176 (490)
T PLN02880 98 FLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNG-GGVIQGTASEAVLVVLLAARDRVLRKVGK 176 (490)
T ss_pred HHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCC-ceEEcCccHHHHHHHHHHHHHHHHHHhcc
Confidence 44444444444333344444467899999999999998875321 1 357789989987766554321
Q ss_pred ---CCCeEEEcCCCchhHHHHHHHcCCE---EEEEEcCC-CCCCCCHHHHHhhcccC------CcEEEecCCCCCcccCC
Q 013883 193 ---PGDEVILFAPFYDSYEATLSMAGAK---IKCITLRP-PDFAIPIEELKSTISKN------TRAILMNTPHNPTGKMF 259 (434)
Q Consensus 193 ---~gd~Vlv~~p~y~~~~~~~~~~G~~---~~~v~~~~-~~~~~d~~~l~~~i~~~------~~~i~~~~p~NPTG~~~ 259 (434)
+.-.|++.+-+|......+..+|+. ++.||.+. +++.+|++.|+++|.+. +-+|+.+...-.||.+-
T Consensus 177 ~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD 256 (490)
T PLN02880 177 NALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVD 256 (490)
T ss_pred cccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccC
Confidence 1124667888899999999999994 78899885 46789999999999642 33444455688899887
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccccCC-CCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh--hHHHH
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH--LTWGV 336 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~--~~~~l 336 (434)
| +++|+++|++||+|+.+|.+|.++..-- +... .+.+...-.-+..++.|.++ ....+|+++.+.. +...+
T Consensus 257 p---l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~--~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~ 330 (490)
T PLN02880 257 P---LLELGKIAKSNGMWFHVDAAYAGSACICPEYRH--YIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSL 330 (490)
T ss_pred c---HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHH--HhcCchhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHHH
Confidence 4 6678999999999999999999875321 1100 11111122356778999986 6677898888632 11211
Q ss_pred HHHhhcc--------------ccCC---chHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecC-Ce
Q 013883 337 RQAHSFL--------------TFAT---STPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFKVFPS-SG 396 (434)
Q Consensus 337 ~~~~~~~--------------~~~~---~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~ 396 (434)
..-..+. .++. .......+...|+. +.+.+++..++..+..+++.+.|++. ++++..+ +.
T Consensus 331 ~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~ 410 (490)
T PLN02880 331 STNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIF 410 (490)
T ss_pred ccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCce
Confidence 1100000 0000 00001111112333 45566667777778888899988775 7887654 55
Q ss_pred eEEEeeecCCCCCCC------HHHHHHHHHHhcCeEEEC
Q 013883 397 TYFVVVDHTPFGHET------DIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 397 ~~~~~~~~~~~~~~~------~~~~~~~Ll~~~GV~v~p 429 (434)
++. .+++.+..... ..++.++|.++..+.+.+
T Consensus 411 ~iv-~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~ 448 (490)
T PLN02880 411 SLV-CFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISH 448 (490)
T ss_pred EEE-EEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEE
Confidence 544 44444322111 134666666665666553
No 356
>PLN02590 probable tyrosine decarboxylase
Probab=99.41 E-value=3.2e-10 Score=115.92 Aligned_cols=295 Identities=12% Similarity=0.085 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-----CCCcEEEcCChHHHHHHHHHHccC--------
Q 013883 126 FVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVD-----PEKEVTVTSGCTEAIAATILGLIN-------- 192 (434)
Q Consensus 126 ~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-----~~~~i~~t~G~~~ai~~~~~~l~~-------- 192 (434)
.+-+.+..++......|....+..++++.+.+++.+..|.+-. .. .=++++|+++++..++.+..+
T Consensus 146 ~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~-gG~~~sGgSeAnl~al~aAR~~~~~~~g~ 224 (539)
T PLN02590 146 FLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNG-GGVIQGTGCEAVLVVVLAARDRILKKVGK 224 (539)
T ss_pred HHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCC-ceEEcCchHHHHHHHHHHHHHHHHhhhcc
Confidence 4445444454433344545557789999999999999987532 12 356788889888776655322
Q ss_pred ---CCCeEEEcCCCchhHHHHHHHcCC---EEEEEEcCC-CCCCCCHHHHHhhcccC------CcEEEecCCCCCcccCC
Q 013883 193 ---PGDEVILFAPFYDSYEATLSMAGA---KIKCITLRP-PDFAIPIEELKSTISKN------TRAILMNTPHNPTGKMF 259 (434)
Q Consensus 193 ---~gd~Vlv~~p~y~~~~~~~~~~G~---~~~~v~~~~-~~~~~d~~~l~~~i~~~------~~~i~~~~p~NPTG~~~ 259 (434)
+.-.|++.+-+|......+..+|+ +++.||.+. +++.+|++.|+++|.+. +-+|+.+...-.||.+=
T Consensus 225 ~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiD 304 (539)
T PLN02590 225 TLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVD 304 (539)
T ss_pred cCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccC
Confidence 112466678899999999999998 588999985 36899999999999652 23444455577888764
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccccC-CCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh--hHHHH
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH--LTWGV 336 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~--~~~~l 336 (434)
.+++|+++|++||+|+.+|.||.++..- .+.... +.+...-.=+...+.|.+. ...-+|.+..+.. +.+.+
T Consensus 305 ---pl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~--~~Gie~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~ 378 (539)
T PLN02590 305 ---PLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKF--IDGIENADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDAL 378 (539)
T ss_pred ---CHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHH--hcCCccCCEEEECchhhcC-cCcCEEEEEecCHHHHHHHh
Confidence 5777999999999999999999987532 111111 1111111234567899887 5677888887642 22222
Q ss_pred HHHhhcc----------------ccCCch-HHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecC-Ce
Q 013883 337 RQAHSFL----------------TFATST-PMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFKVFPS-SG 396 (434)
Q Consensus 337 ~~~~~~~----------------~~~~~~-~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~ 396 (434)
.....+. ....+. .....+...|+. +.+.++++.++..+..+++.+.+++. +|+++.+ +-
T Consensus 379 ~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l 458 (539)
T PLN02590 379 KTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYF 458 (539)
T ss_pred hcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCce
Confidence 1111111 011111 111222223332 35667888888889999999999876 7887654 44
Q ss_pred eEEEeeecCCCCCCC------HHHHHHHHHHhcCeEEE
Q 013883 397 TYFVVVDHTPFGHET------DIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 397 ~~~~~~~~~~~~~~~------~~~~~~~Ll~~~GV~v~ 428 (434)
+ .+.+++.+.+... ..++.++|.++-.+++.
T Consensus 459 ~-iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs 495 (539)
T PLN02590 459 S-LVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFIS 495 (539)
T ss_pred E-EEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 4 3344443322111 13455555555334443
No 357
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.39 E-value=1.3e-10 Score=120.92 Aligned_cols=186 Identities=13% Similarity=0.101 Sum_probs=125.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCC
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPD 227 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~ 227 (434)
+.+..+.+|+.++ .++..+++||++.++..++.+.+.+||.|+++..+|.+..+.+.+.|+.+++++.....
T Consensus 197 i~eAe~~aA~~fg--------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~ 268 (713)
T PRK15399 197 HLEAEEYIARTFG--------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNA 268 (713)
T ss_pred HHHHHHHHHHHhC--------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccc
Confidence 4456666666655 44478999999999999999999999999999999999999999999999998654323
Q ss_pred C----CCCH-----HHHHhhcccC-----CcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEE-EEcCcCCccc-cCC
Q 013883 228 F----AIPI-----EELKSTISKN-----TRAILMNTPHNPTGKMFTREELNVIASLCIENDVLV-FSDEVYDKLA-FEM 291 (434)
Q Consensus 228 ~----~~d~-----~~l~~~i~~~-----~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~i-I~Deay~~~~-~~~ 291 (434)
+ +++. +.+++++... ++++++++| +-.|++++. ++|+++| |+.+ ++||||.... |..
T Consensus 269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~---~~I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNT---DWIKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCH---HHHHHHh---CCCEEEEeccchhhhhcCc
Confidence 2 3455 8888888652 357888777 667999954 5566666 5555 6999997543 333
Q ss_pred CCccccCCC---CCCCceEEEccCChhhccccc-eeeeEEeChhhH-HHHHHHhhccccCCchH
Q 013883 292 DHISIASLP---GMYERTVTMNSLGKTFSLTGW-KIGWAIAPPHLT-WGVRQAHSFLTFATSTP 350 (434)
Q Consensus 292 ~~~~~~~~~---~~~~~~i~i~S~SK~~g~~G~-R~G~~~~~~~~~-~~l~~~~~~~~~~~~~~ 350 (434)
.......+. +....++.++|..|.++ ++ -.++++.+..+- ++++........+.|..
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~--alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY 403 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKMLA--AFSQASLIHIKGEYDEETFNEAFMMHTSTSPSY 403 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhcccc--ccchheeeeecCCCCHHHHHHHHHHHcCCCcHH
Confidence 222111121 11223456899999984 44 356888765432 34444333333344443
No 358
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.38 E-value=1.1e-10 Score=126.63 Aligned_cols=267 Identities=16% Similarity=0.142 Sum_probs=165.1
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCCCCcEEE-cCChHHHHHHHHHHc----cCCCC----eEEEcCCCchhHHHHHHHcCC
Q 013883 146 HGVPEFNSAIASRFKKDSGLEVDPEKEVTV-TSGCTEAIAATILGL----INPGD----EVILFAPFYDSYEATLSMAGA 216 (434)
Q Consensus 146 ~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~-t~G~~~ai~~~~~~l----~~~gd----~Vlv~~p~y~~~~~~~~~~G~ 216 (434)
+|..++...+.+++.+..|.+ ++.+ .+|++++....+.++ ..+|| +|++++..|+.....+...|+
T Consensus 538 qG~l~~i~e~q~~l~eltG~d-----~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~ 612 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITGYD-----AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGM 612 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCCC-----CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCC
Confidence 466788888888888888863 3444 445555553433333 25565 599999999888888899999
Q ss_pred EEEEEEcCCCCCCCCHHHHHhhccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC
Q 013883 217 KIKCITLRPPDFAIPIEELKSTISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDH 293 (434)
Q Consensus 217 ~~~~v~~~~~~~~~d~~~l~~~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~ 293 (434)
+++.++.+. ++.+|+++|++++++ ++.+|++.+|++-.+... ++++|+++|+++|+++++|.++......
T Consensus 613 ~vv~v~~d~-~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~---~I~eI~~i~h~~G~~v~VDgA~~~al~~--- 685 (954)
T PRK05367 613 KVVVVACDE-NGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEE---TIREICEIVHEHGGQVYLDGANMNAQVG--- 685 (954)
T ss_pred EEEEECCCC-CCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecC---CHHHHHHHHHHcCCEEEEECcChhhccC---
Confidence 999999874 678999999999966 356677778776533333 4888999999999999999999642211
Q ss_pred ccccCCCCCCCceEEEccCChhhc----cccceeeeEEeChhhHHHHHHHh-----h---ccccCCchHH----HHHHHH
Q 013883 294 ISIASLPGMYERTVTMNSLGKTFS----LTGWKIGWAIAPPHLTWGVRQAH-----S---FLTFATSTPM----QWAATA 357 (434)
Q Consensus 294 ~~~~~~~~~~~~~i~i~S~SK~~g----~~G~R~G~~~~~~~~~~~l~~~~-----~---~~~~~~~~~~----q~a~~~ 357 (434)
+. -++..+-.++..+..|.|+ ..|.-+|.+.+.+++...+-... . ......+... ..++..
T Consensus 686 --l~-~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~ 762 (954)
T PRK05367 686 --LA-RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWM 762 (954)
T ss_pred --CC-ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHH
Confidence 11 1112234578888999974 24555888888765543331110 0 0111111221 111222
Q ss_pred HHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEE--EeeecCCCC---CCCHHHHHHHHHHhcCeEEE
Q 013883 358 ALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYF--VVVDHTPFG---HETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 358 ~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~Ll~~~GV~v~ 428 (434)
++.. +.+.+++..++...+.+++.+.|++. ++.+..+.+..+ +.+++.+.. ..+..+++++|. ++|+...
T Consensus 763 yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~-d~G~~~~ 839 (954)
T PRK05367 763 YIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLI-DYGFHAP 839 (954)
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHH-HCCCeEe
Confidence 3332 45667777777778889999988763 333322211110 223332211 124678999985 5588653
No 359
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.38 E-value=7.8e-11 Score=105.88 Aligned_cols=171 Identities=19% Similarity=0.208 Sum_probs=140.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-C
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-P 226 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~ 226 (434)
+..+.+.++++++ -+ .+-+|+|+.++=++++.+++.+||.|++....+....-+++.+|+++..||-.. +
T Consensus 63 I~~F~~dlaeFlg--------~D-~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~P 133 (382)
T COG1103 63 IKDFLEDLAEFLG--------MD-EVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYP 133 (382)
T ss_pred HHHHHHHHHHHhC--------Cc-eeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCC
Confidence 4577788888887 44 789999999999999999999999999999999988889999999999999653 6
Q ss_pred CCCCCHHHHHhhccc-------CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCC
Q 013883 227 DFAIPIEELKSTISK-------NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASL 299 (434)
Q Consensus 227 ~~~~d~~~l~~~i~~-------~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~ 299 (434)
++.+++|...+.|.+ .+.+.++++|....|... +.++++++|++++++++...+|..... +.+....
T Consensus 134 ey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~---Dakkva~ic~e~gvPlllN~AYt~Grm---pvs~ke~ 207 (382)
T COG1103 134 EYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLA---DAKKVAKICREYGVPLLLNCAYTVGRM---PVSGKEI 207 (382)
T ss_pred ceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCch---hhHHHHHHHHHcCCceEeecceeeccc---ccccccc
Confidence 788999888887743 356778889988888765 788899999999999999999986332 2222222
Q ss_pred CCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHH
Q 013883 300 PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQ 338 (434)
Q Consensus 300 ~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~ 338 (434)
...++++|-.|.++ +.-.+|.+..+.++.+.+-+
T Consensus 208 ----g~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r 241 (382)
T COG1103 208 ----GADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLR 241 (382)
T ss_pred ----CCCEEEecCccchh-ccCCeeEEeehhHHHHHHHh
Confidence 33588999999998 44579999999988876543
No 360
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.35 E-value=3.6e-10 Score=120.14 Aligned_cols=299 Identities=14% Similarity=0.138 Sum_probs=176.6
Q ss_pred eeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcC-ChHHHHHHH
Q 013883 111 AINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYAR---GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTS-GCTEAIAAT 186 (434)
Q Consensus 111 ~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~-G~~~ai~~~ 186 (434)
.+.||.-...+++-.....+....+.. .+.|.| .+|..++..++.+++.+..|.+. +-+-. ++..+..+.
T Consensus 502 ~~~LGsCTmK~n~~~~~~p~s~~eF~t-~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~-----~Sl~p~sGA~gE~A~ 575 (954)
T PRK12566 502 MIPLGSCTMKLNATSEMIPITWPEFAQ-LHPFAPREQAEGYRAMIDELEAWLCAITGFDA-----ICMQPNSGAQGEYAG 575 (954)
T ss_pred cccCcccccCcCcHHhhhcccchhhhc-CCCCCchhhhcCHHHHHHHHHHHHHHHHCCCe-----EeecCCchHHHHHHH
Confidence 456665333334333333222222222 267888 78998888888999988888643 23333 334444344
Q ss_pred HHHcc----C---C-CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc---cCCcEEEecCCCCCc
Q 013883 187 ILGLI----N---P-GDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS---KNTRAILMNTPHNPT 255 (434)
Q Consensus 187 ~~~l~----~---~-gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~---~~~~~i~~~~p~NPT 255 (434)
+.++. . + .++|+++.-.|+.....+...|++++.++.++ ++.+|+++|++.++ .++++|.+.+|++-.
T Consensus 576 Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~-~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~G 654 (954)
T PRK12566 576 LLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDP-DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHG 654 (954)
T ss_pred HHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCC-CCCcCHHHHHHHhhccCCCEEEEEEEecCcCc
Confidence 44432 2 2 35678887777444445778899999999984 77999999999997 467777777776655
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcc----ccceeeeEEeChh
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSL----TGWKIGWAIAPPH 331 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~----~G~R~G~~~~~~~ 331 (434)
+. .+++++|+++|+++|+++++|.++..-.. ....++..+-.++..+..|.|+. .|.-+|.+...++
T Consensus 655 v~---e~~V~eI~~iah~~Galv~vDgA~~~a~~------~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~ 725 (954)
T PRK12566 655 VY---EEGIREICEVVHQHGGQVYMDGANLNAQV------GLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAH 725 (954)
T ss_pred ee---cchHHHHHHHHHHcCCEEEEEeeChhhcc------CCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhh
Confidence 43 34699999999999999999999852111 11111234456888999998852 2444666555554
Q ss_pred hHHHHHHHh---------hcc-ccCC---chHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCe
Q 013883 332 LTWGVRQAH---------SFL-TFAT---STPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSG 396 (434)
Q Consensus 332 ~~~~l~~~~---------~~~-~~~~---~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 396 (434)
+...+.... +.. ..+. +.....++..++.. +.+ +++.......+.+++.+.|.+. ++.+.++.+
T Consensus 726 L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~ 804 (954)
T PRK12566 726 LAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLYRGRNE 804 (954)
T ss_pred hhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCC
Confidence 433333211 000 1111 11113333444443 344 6666666677888999988762 444422222
Q ss_pred eEE--EeeecCCCC---CCCHHHHHHHHHHhcCeEE
Q 013883 397 TYF--VVVDHTPFG---HETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 397 ~~~--~~~~~~~~~---~~~~~~~~~~Ll~~~GV~v 427 (434)
.+| +.+++.+.. ..+..+++++|+ ++||..
T Consensus 805 ~~~hEfii~~~~l~~~~g~~~~dvakRL~-d~Giha 839 (954)
T PRK12566 805 RVAHECILDLRPLKAQTGISEEDVAKRLM-DYGFHA 839 (954)
T ss_pred CeeeEEEEEccccccccCCCHHHHHHHHH-HCCcEE
Confidence 322 123332211 125678999998 568764
No 361
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.34 E-value=3.7e-10 Score=113.22 Aligned_cols=264 Identities=17% Similarity=0.192 Sum_probs=167.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-C
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-P 226 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~ 226 (434)
+.+..+..|+.++ .+...+++||++.++..++.+++.+||.|+++.+++.+....+.+.|+.++.+.... +
T Consensus 72 i~eAqe~aA~~fg--------Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np 143 (557)
T COG1982 72 IKEAQELAARVFG--------ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP 143 (557)
T ss_pred HHHHHHHHHHHhC--------CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence 4566666666665 344689999999999999999999999999999999999999999999988775432 2
Q ss_pred C----CCCCHHHHHhhcccC--C-cEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCC
Q 013883 227 D----FAIPIEELKSTISKN--T-RAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASL 299 (434)
Q Consensus 227 ~----~~~d~~~l~~~i~~~--~-~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~ 299 (434)
. ++++.+.+++++.++ . |++++.+| +-.|+++ ++++|++.+...++|+.+|+++....--.. .+...
T Consensus 144 ~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnp-TYdGv~~---n~~~i~~~~~~~~a~v~~deah~~~~~~~~--~l~~~ 217 (557)
T COG1982 144 LYGIIGGIPLETFKEALLAHPDAEKLAVITNP-TYDGVCY---NLRKIVELLHHYGAWVLYDEAHPAHFDFSP--MLPES 217 (557)
T ss_pred cccccCCCCHHHHHHHHHhChhhheeEEEecC-ccceEee---cHHHHHHHHhhcCceEEhhhcCcccccccc--cCcch
Confidence 2 568999999977653 3 66777655 3359998 466688889999999999999865321111 11111
Q ss_pred CCCCCceEEEccCChhhccccceeeeEEeCh--hh-HHHHHHHhhccccCCchHHHHHHHHHHh----C-ChHHHHHHHH
Q 013883 300 PGMYERTVTMNSLGKTFSLTGWKIGWAIAPP--HL-TWGVRQAHSFLTFATSTPMQWAATAALR----A-PETYYEELKR 371 (434)
Q Consensus 300 ~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~--~~-~~~l~~~~~~~~~~~~~~~q~a~~~~L~----~-~~~~~~~~~~ 371 (434)
......++..+|..|.++ +.--..+++.+. .+ .+++.........+.|.....|...+-+ . ..+..++..+
T Consensus 218 ~~~~~~~~~tqS~HK~l~-alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~ 296 (557)
T COG1982 218 ALNGGADFVTQSTHKLLA-ALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVID 296 (557)
T ss_pred hhhcCceEEEechhhhhh-hhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 112456899999999987 444566777764 21 2344444433344445444433333311 1 1122233345
Q ss_pred HHHHHHHHHHHHhhhCC-CEeecCCe-----e----------EE------EeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 372 DYSAKKAILVEGLNAVG-FKVFPSSG-----T----------YF------VVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 372 ~~~~~~~~l~~~L~~~g-~~~~~~~~-----~----------~~------~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
...+.|+.+++...+.+ +.+..+.- + .+ +.+..+..|. ++..+...|.++ |+...
T Consensus 297 ~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gi-pg~~v~~~L~e~-gii~e 373 (557)
T COG1982 297 EAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGI-PGAIVAKYLREH-GIIPE 373 (557)
T ss_pred HHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCC-cHHHHHHHHHHc-CCeee
Confidence 55566666666666654 44433221 1 11 1122224455 577787777665 66554
No 362
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.34 E-value=7.2e-10 Score=113.48 Aligned_cols=263 Identities=13% Similarity=0.128 Sum_probs=165.9
Q ss_pred HHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCC-C--------CCCC-CcEEEcCChHHHHHHHHHHccC--------
Q 013883 131 AIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGL-E--------VDPE-KEVTVTSGCTEAIAATILGLIN-------- 192 (434)
Q Consensus 131 ~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~-~--------~~~~-~~i~~t~G~~~ai~~~~~~l~~-------- 192 (434)
+..++......|.......++.+.+.+++.+..+. + -.++ ..-++++|+++++..++.+..+
T Consensus 110 l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~ 189 (522)
T TIGR03799 110 LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGD 189 (522)
T ss_pred HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhcccccc
Confidence 33344433334444445678999999998877631 1 0111 1346788999988776544311
Q ss_pred ------------------CCCeEEEcCCCchhHHHHHHHcCC---EEEEEEcCCCCCCCCHHHHHhhcc----cCCcEEE
Q 013883 193 ------------------PGDEVILFAPFYDSYEATLSMAGA---KIKCITLRPPDFAIPIEELKSTIS----KNTRAIL 247 (434)
Q Consensus 193 ------------------~gd~Vlv~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~d~~~l~~~i~----~~~~~i~ 247 (434)
++..|++.+-.|......+..+|+ +++.+|.++ ++.+|++.|+++++ .+++.+.
T Consensus 190 ~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~-~g~~d~~~L~~~i~~~~~~g~~~~~ 268 (522)
T TIGR03799 190 FKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA-NNRIDVDALRDKCAELAEQNIKPLA 268 (522)
T ss_pred ccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC-CCcCCHHHHHHHHHHHHHCCCCcEE
Confidence 134688888899999999999998 789999985 78999999999886 3555554
Q ss_pred ec--CCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC-CCccccCCCCCCCceEEEccCChhhccccceee
Q 013883 248 MN--TPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASLPGMYERTVTMNSLGKTFSLTGWKIG 324 (434)
Q Consensus 248 ~~--~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G 324 (434)
++ ..++.||.+-| +++|+++|+++|+|+++|.+|.+...-. +.... +.+...-..+..+..|.++ .-..+|
T Consensus 269 vvataGtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~--l~gle~aDSit~d~HK~l~-~P~g~G 342 (522)
T TIGR03799 269 IVGVAGTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHL--LKGIERADSVTIDAHKQLY-VPMGAG 342 (522)
T ss_pred EEEEecCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHH--hcCchhCCEEEEChhhcCC-cCcccE
Confidence 43 45778999875 6668899999999999999998653211 11100 1111123467789999664 234589
Q ss_pred eEEeC-hhhHHHHHHHhhc-----------cccCCchHH-HHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CC
Q 013883 325 WAIAP-PHLTWGVRQAHSF-----------LTFATSTPM-QWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV-GF 389 (434)
Q Consensus 325 ~~~~~-~~~~~~l~~~~~~-----------~~~~~~~~~-q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 389 (434)
+++.+ ++..+.+.....+ ..+..+... ...+..+|+. ..+.++++.++..+..+++.+.|++. ++
T Consensus 343 ~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~ 422 (522)
T TIGR03799 343 MVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDF 422 (522)
T ss_pred EEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 88875 4444433221001 011111111 1123333333 24567888888899999999999876 88
Q ss_pred EeecC-CeeEEE
Q 013883 390 KVFPS-SGTYFV 400 (434)
Q Consensus 390 ~~~~~-~~~~~~ 400 (434)
+++.+ +-+..+
T Consensus 423 el~~~p~l~iv~ 434 (522)
T TIGR03799 423 ELVTEPELCLLT 434 (522)
T ss_pred EEecCCCccEEE
Confidence 87654 444333
No 363
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.34 E-value=1.8e-10 Score=113.46 Aligned_cols=251 Identities=15% Similarity=0.069 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEc-CChHHHHHHHHHHccCCCCeEEEcCCCchh-HHHHHHHc--CCEEEEEEcC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVT-SGCTEAIAATILGLINPGDEVILFAPFYDS-YEATLSMA--GAKIKCITLR 224 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t-~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~-~~~~~~~~--G~~~~~v~~~ 224 (434)
.+.|+.++++++ .+++.+|+++ ++++.+++.++..++.+ +.+++..-.|.. +.+.+... +.++..++.+
T Consensus 44 ~~~r~~l~~l~~------~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~ 116 (361)
T TIGR01366 44 GRVREGLAELFS------LPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTAD 116 (361)
T ss_pred HHHHHHHHHHhC------CCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccCCceEEecC
Confidence 345555555554 3223267775 66999999999998753 334444444443 34444442 2366666655
Q ss_pred CCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCC
Q 013883 225 PPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYE 304 (434)
Q Consensus 225 ~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~ 304 (434)
+ +..++. .+.+++++|.+++..|.||+..|.++ | ++++|+++|+|.+..... ....+..
T Consensus 117 ~-~~~~~~-----~~~~~~~lV~~~h~et~tG~~~pi~~---I---~~~~g~~~iVDavqs~g~---~~idv~~------ 175 (361)
T TIGR01366 117 P-GSAPEP-----QADPGVDVIAWAHNETSTGVAVPVRR---P---EGSDDALVVIDATSGAGG---LPVDIAE------ 175 (361)
T ss_pred C-CCCCCC-----ccCCCCCEEEEcccCCccceeccccc---c---cccCCCeEEEEcCccccC---CCCCHHH------
Confidence 3 333332 35678999999999999999997654 3 588999999999987632 2222221
Q ss_pred ceEEEccCChhhccccceeeeEEeChhhHHHHHHHhh---------------------ccccCCchHHHHHHHHHHhCCh
Q 013883 305 RTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS---------------------FLTFATSTPMQWAATAALRAPE 363 (434)
Q Consensus 305 ~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~~q~a~~~~L~~~~ 363 (434)
-.+++.|-.|.+|.+|- +++++.+++.+++++.... ...++++.....++..+|+...
T Consensus 176 ~D~~~~s~~K~lg~~~G-l~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~ 254 (361)
T TIGR01366 176 TDVYYFAPQKNFASDGG-LWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMN 254 (361)
T ss_pred CCEEEEEchhhcCCCCc-eEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHH
Confidence 24788999999987642 6666778877766542110 1123334443445555555422
Q ss_pred H--HHHHHHHHHHHHHHHHHHHhhhCC-CEeec-CC---eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 364 T--YYEELKRDYSAKKAILVEGLNAVG-FKVFP-SS---GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 364 ~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+ .++...+++++..+++++.|++.+ ++.+. .. ......+.+ +.+. +..++..+|. ++||.+.+|.
T Consensus 255 ~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~-~~g~-~~~~v~~~L~-~~gI~i~~~~ 326 (361)
T TIGR01366 255 GNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDF-VDDI-DAATVAKILR-ANGIVDTEPY 326 (361)
T ss_pred HccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEEC-CCcc-CHHHHHHHHH-HCCCeeccCc
Confidence 1 256677888899999999999986 45442 11 111122223 2333 5677888784 5599998763
No 364
>PLN02452 phosphoserine transaminase
Probab=99.32 E-value=1.2e-09 Score=107.15 Aligned_cols=294 Identities=13% Similarity=0.120 Sum_probs=185.7
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC---------CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG---------KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~---------~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
.+++|+-| | -..|+.|++++.+.+.+- ..+..+ -..++.+.+.+.+.+.++.+-+.+ -+++..|++
T Consensus 7 ~~~~f~pG-P-~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~--~f~~i~~~~~~~L~~l~~~p~~y~-v~~l~Gsgt 81 (365)
T PLN02452 7 RVFNFSAG-P-ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGK--EFLSIIQKAEADLRELLDIPDNYE-VLFLQGGAS 81 (365)
T ss_pred ceEeeeCC-C-CCCCHHHHHHHHHHHhcccccCccccccCCCch--HHHHHHHHHHHHHHHHhCCCCCce-EEEEeCccH
Confidence 35677655 2 234667777776654330 111222 234666667777777777532333 566778899
Q ss_pred HHHHHHHHHccCCCCeEEEcCCCchh--HHHHHHHcCCEEEEEEcCCCC--CCCCHHHHHhhcccCCcEEEecCCCCCcc
Q 013883 181 EAIAATILGLINPGDEVILFAPFYDS--YEATLSMAGAKIKCITLRPPD--FAIPIEELKSTISKNTRAILMNTPHNPTG 256 (434)
Q Consensus 181 ~ai~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~G~~~~~v~~~~~~--~~~d~~~l~~~i~~~~~~i~~~~p~NPTG 256 (434)
.+++++...++.+||++++.....++ ..+.++.+|...+.....+.+ .-+++++++. .++.+.|.+++-...||
T Consensus 82 ~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~hnETstG 159 (365)
T PLN02452 82 TQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TPDAKFVHICANETIHG 159 (365)
T ss_pred HHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CCCCcEEEECCCCCCCc
Confidence 99999999999999988887776665 456677788644333222211 2456666532 34677888877777889
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV 336 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l 336 (434)
+.+. +++++. ++++|+|.+..... ....+..+ + +.+.|.-|.+|.+| +|++++++++++++
T Consensus 160 v~~~--~~~~i~------~~~lvVDa~Ss~g~---~pidv~~~----~--v~~~saqK~lGP~G--l~~v~vr~~~l~~~ 220 (365)
T PLN02452 160 VEFK--DYPDVG------NVPLVADMSSNFLS---KPVDVSKY----G--VIYAGAQKNVGPSG--VTIVIIRKDLIGNA 220 (365)
T ss_pred EecC--cccccC------CCeEEEECCccccC---cccCHHHc----C--EEEEecccccCCCC--eEEEEEcHHHHhhc
Confidence 8543 234342 38999999987642 22222221 1 23469999999888 89999998887654
Q ss_pred HHH------------hhccccCCchHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHhhhC-CCEe--ecC--Cee
Q 013883 337 RQA------------HSFLTFATSTPMQWAATAALRAPET--YYEELKRDYSAKKAILVEGLNAV-GFKV--FPS--SGT 397 (434)
Q Consensus 337 ~~~------------~~~~~~~~~~~~q~a~~~~L~~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~~--~~~ 397 (434)
... .....++++....+++..+|+...+ .++.+.++.+++.+++++.|++. |+.. ..+ ...
T Consensus 221 ~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~ 300 (365)
T PLN02452 221 RPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSL 300 (365)
T ss_pred ccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCC
Confidence 211 1112356777777777777775332 47888999999999999999985 6611 111 234
Q ss_pred EEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 398 YFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+.+-+.+... ....+|.+.+ ++.|+...+|..
T Consensus 301 ~~vsF~~~~~--~~~~~f~~~~-~~~g~~~~~G~r 332 (365)
T PLN02452 301 MNVPFTLGGS--ELEAEFVKEA-AKAGMVQLKGHR 332 (365)
T ss_pred eEEEEEcCCc--hhHHHHHHHH-HHCCCcccCCcc
Confidence 4444444332 2455676666 566999999864
No 365
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.31 E-value=3e-10 Score=103.55 Aligned_cols=175 Identities=25% Similarity=0.354 Sum_probs=126.3
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEc-CCCchhHHHH----------HHHcCCEEEE
Q 013883 152 NSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILF-APFYDSYEAT----------LSMAGAKIKC 220 (434)
Q Consensus 152 r~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~-~p~y~~~~~~----------~~~~G~~~~~ 220 (434)
|+.+-+.+.+.+|.....- +..+.+| ++||..++..+++|||+.+.. ---|.....+ +..+|+....
T Consensus 67 RdtLe~vyA~vf~aE~a~V-Rpq~isG-THAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~ 144 (416)
T COG4100 67 RDTLERVYAQVFGAEAALV-RPQIISG-THAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKA 144 (416)
T ss_pred hhHHHHHHHHHhcccccee-eeeeecc-hhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceee
Confidence 5555555555555432222 3455666 999999999999999997643 3445555554 4557778888
Q ss_pred EEcCCCCCCCCHHHHHhhcccCCcEEEecCC-CCCcccCCCHHHHHHHHHHHHHc--CcEEEEcCcCCccccCCCCcccc
Q 013883 221 ITLRPPDFAIPIEELKSTISKNTRAILMNTP-HNPTGKMFTREELNVIASLCIEN--DVLVFSDEVYDKLAFEMDHISIA 297 (434)
Q Consensus 221 v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p-~NPTG~~~~~e~l~~i~~la~~~--~~~iI~Deay~~~~~~~~~~~~~ 297 (434)
+|+.. ++.+|.+.+++++++++|+|.+.-. ..----.++.+++++++++.++- |+++++|.+|.+|+-..++...
T Consensus 145 v~Lt~-~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt~v- 222 (416)
T COG4100 145 VPLTA-DGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEPTHV- 222 (416)
T ss_pred ccccc-CCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccCcccc-
Confidence 88885 7889999999999999999988532 22222256888999999999874 8999999999999754333221
Q ss_pred CCCCCCCceEEEccCChhhccccce--eeeEEeChhhHHHHH
Q 013883 298 SLPGMYERTVTMNSLGKTFSLTGWK--IGWAIAPPHLTWGVR 337 (434)
Q Consensus 298 ~~~~~~~~~i~i~S~SK~~g~~G~R--~G~~~~~~~~~~~l~ 337 (434)
+..++.+|+-|+.| .|+- .||+.++++++++..
T Consensus 223 ------GaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 223 ------GADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred ------chhhhccceeeCCC-CceeeccceeechHHHHHhhc
Confidence 23467899999988 6652 489999999987653
No 366
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.27 E-value=1.3e-10 Score=107.09 Aligned_cols=281 Identities=19% Similarity=0.199 Sum_probs=178.1
Q ss_pred cHHHHHHHHHHHHcCC----CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc------C-
Q 013883 124 PDFVKDAAIQAIRDGK----NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI------N- 192 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~----~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~------~- 192 (434)
+|.+.++++++..... .-|..-. .++.+.+.++++ -+ .++-.+.+.||.+.++.... +
T Consensus 77 hpki~~aLqeq~~kLtlssrafYnd~~--~~f~~~vt~lf~--------~~-kvlpmnTGaEa~Eta~KLaR~wgy~~K~ 145 (427)
T KOG1402|consen 77 HPKIIKALQEQADKLTLSSRAFYNDVL--GEFAEYVTKLFG--------YD-KVLPMNTGAEAVETACKLARKWGYRKKN 145 (427)
T ss_pred CHHHHHHHHHHHhHhhhhhHHHhhhhH--HHHHHHHHHhcC--------cc-eeeecccchhHHHHHHHHHHHHHHhhcc
Confidence 5778888888776421 1243322 344444444443 33 57767777999988866542 1
Q ss_pred -CCCe--EEEcCCCchhHH----------HHHHHcCC----EEEEEEcCCCCCCCCHHHHHhhcccC-CcEEEecCCCCC
Q 013883 193 -PGDE--VILFAPFYDSYE----------ATLSMAGA----KIKCITLRPPDFAIPIEELKSTISKN-TRAILMNTPHNP 254 (434)
Q Consensus 193 -~gd~--Vlv~~p~y~~~~----------~~~~~~G~----~~~~v~~~~~~~~~d~~~l~~~i~~~-~~~i~~~~p~NP 254 (434)
|.|+ |+.....|++-. +..+.+|- .+..||+. |.++|+.++++. .+++++...+..
T Consensus 146 ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~------d~eale~~l~~~~vaaFivEPIQGE 219 (427)
T KOG1402|consen 146 IPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG------DAEALEVALKSPNVAAFIVEPIQGE 219 (427)
T ss_pred CCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC------CHHHHHHHhcCCCeeEEEeeccccc
Confidence 3232 333333333211 11122221 13444554 789999999874 455555545889
Q ss_pred cccCCC-HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc-ceeeeEEeChhh
Q 013883 255 TGKMFT-REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG-WKIGWAIAPPHL 332 (434)
Q Consensus 255 TG~~~~-~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~~~~~~~~ 332 (434)
.|++.| +..++++.++|.+||+++|.||++.++...|+......-.-.+|-++ |.|.++ .| +.+..+.++.++
T Consensus 220 aGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivi----lgKalS-GG~~Pvsavl~~~~i 294 (427)
T KOG1402|consen 220 AGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVI----LGKALS-GGVYPVSAVLADDDI 294 (427)
T ss_pred cceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEE----Eecccc-CCeeeeEEEEecHHH
Confidence 999655 45599999999999999999999999998887655443322344333 568886 44 478888899999
Q ss_pred HHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC--C----EeecCCeeEEEeeecCC
Q 013883 333 TWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG--F----KVFPSSGTYFVVVDHTP 406 (434)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~----~~~~~~~~~~~~~~~~~ 406 (434)
+..++......+|+.++++.+++.++|+-.. -+++.++.++.-+.|+..|.++. + ..+... |++..+.+.+
T Consensus 295 m~~~~pgeHgsTyggNpLg~~vaiAalevi~--eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGr-Gl~~ai~i~~ 371 (427)
T KOG1402|consen 295 MLNIKPGEHGSTYGGNPLGCAVAIAALEVIV--EEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGR-GLLNAIVINP 371 (427)
T ss_pred HhccCCCccccccCCChHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccccccchhheeecc-ceEEEEEecc
Confidence 8777777677789999999999999888632 24567777888888888888863 2 223333 4454444432
Q ss_pred C--CCCCHHHHHHHHHHhcCeEEECC
Q 013883 407 F--GHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 407 ~--~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
. ...++-+++.+| ++.|++.-|-
T Consensus 372 ~~~~~~~aw~~cl~l-k~~g~LAkpt 396 (427)
T KOG1402|consen 372 SKTSGQDAWDVCLAL-KENGLLAKPT 396 (427)
T ss_pred ccccchhHHHHHHcc-cccccccCCC
Confidence 2 212455677766 4558876653
No 367
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.26 E-value=1.3e-11 Score=105.56 Aligned_cols=82 Identities=21% Similarity=0.430 Sum_probs=69.1
Q ss_pred CCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCCCCcEEEcCChHHHHHHHHHHccCCCCe
Q 013883 119 PNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSG--LEVDPEKEVTVTSGCTEAIAATILGLINPGDE 196 (434)
Q Consensus 119 p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~ 196 (434)
|++.+++.+.+++.+. ..|.+..|.++||+++++++.+.+| +.++++ +|++|+|+++++..++.++++|||.
T Consensus 70 ~d~~~~~~i~~~~~~~-----a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd-~Ivvt~Ga~~al~~l~~~l~dpGD~ 143 (153)
T PLN02994 70 ADICTAEGTIDSFKDI-----ALFQDYHGLANFRKAIANFMAEARGGRVKFDAD-MIVLSAGATAANEIIMFCIADPGDA 143 (153)
T ss_pred cccCCcHHHHHHHHHH-----hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchh-heEEcCCHHHHHHHHHHHHcCCCCE
Confidence 4555555545444442 3499999999999999999999988 678888 8999999999999999999999999
Q ss_pred EEEcCCCchh
Q 013883 197 VILFAPFYDS 206 (434)
Q Consensus 197 Vlv~~p~y~~ 206 (434)
|++++|+|++
T Consensus 144 VlVp~P~Y~~ 153 (153)
T PLN02994 144 FLVPTPYYAA 153 (153)
T ss_pred EEEeCCCCCC
Confidence 9999999963
No 368
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.24 E-value=1.2e-09 Score=107.68 Aligned_cols=267 Identities=18% Similarity=0.188 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC----CCCcEEEcCChHHHHHHHHHHccC--------C
Q 013883 126 FVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVD----PEKEVTVTSGCTEAIAATILGLIN--------P 193 (434)
Q Consensus 126 ~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~----~~~~i~~t~G~~~ai~~~~~~l~~--------~ 193 (434)
.+.+.+...+......|.-.....+++..+.+++.+..|.+-+ .+..=++|+|+++++..++.+..+ .
T Consensus 55 i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~ 134 (373)
T PF00282_consen 55 ILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAK 134 (373)
T ss_dssp HHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhc
Confidence 4445555555544344443335678999999999999988621 112467889999998777654421 1
Q ss_pred C-----C-eEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc---C--Cc-EEEecCCCCCcccCCCH
Q 013883 194 G-----D-EVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK---N--TR-AILMNTPHNPTGKMFTR 261 (434)
Q Consensus 194 g-----d-~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~---~--~~-~i~~~~p~NPTG~~~~~ 261 (434)
| + .|++.+-.|......+..+|+.++.||.++ ++.+|+++|++++.+ + +. +|+.+.....||.+
T Consensus 135 ~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~--- 210 (373)
T PF00282_consen 135 GVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE-DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI--- 210 (373)
T ss_dssp TTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB---
T ss_pred ccccccccccccccccccHHHHhcceeeeEEEEecCCc-chhhhHHHhhhhhcccccccccceeeeccCCCcccccc---
Confidence 1 2 466667689999999999999999999996 789999999998864 2 22 34455668888877
Q ss_pred HHHHHHHHHHHHcCcEEEEcCcCCccccC-CCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh-hHHHHH-H
Q 013883 262 EELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH-LTWGVR-Q 338 (434)
Q Consensus 262 e~l~~i~~la~~~~~~iI~Deay~~~~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~-~~~~l~-~ 338 (434)
+++++|+++|+++|+|+.+|.+|.+..+- ...... +.+...-.=+..++.|.++ .-..+|++..+.+ .+.... .
T Consensus 211 D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~--~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~ 287 (373)
T PF00282_consen 211 DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHL--LFGIERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSI 287 (373)
T ss_dssp -SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGG--GTTGGGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEE
T ss_pred cCHHHHhhhccccceeeeeccccccccccccccccc--ccccccccccccchhhhhc-CCccceeEEeecccchHHHhcc
Confidence 46788999999999999999999983321 111111 1111111234557899998 5568898888643 332111 0
Q ss_pred Hhhc----------------cccCCchHHHHHHH--HHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeec-CCee
Q 013883 339 AHSF----------------LTFATSTPMQWAAT--AALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFKVFP-SSGT 397 (434)
Q Consensus 339 ~~~~----------------~~~~~~~~~q~a~~--~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~ 397 (434)
...+ .+...+. ...++. ..|+. +.+.+++..++..+..+++.+.|++. ++++.. ++-+
T Consensus 288 ~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~ 366 (373)
T PF00282_consen 288 NADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLN 366 (373)
T ss_dssp EETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSS
T ss_pred Chhhhcccccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCce
Confidence 0000 0112222 222222 22332 35667888888889999999999987 577663 4444
Q ss_pred EEE
Q 013883 398 YFV 400 (434)
Q Consensus 398 ~~~ 400 (434)
..+
T Consensus 367 ~vc 369 (373)
T PF00282_consen 367 IVC 369 (373)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 369
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.22 E-value=6.2e-09 Score=101.34 Aligned_cols=292 Identities=14% Similarity=0.128 Sum_probs=181.2
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc-C--------CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD-G--------KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~--------~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
+.+||+-| |. ..|+.|++.+++.+.+ . ..+..+ -..++.+.+.+.+++.++++-+.+ -+++..|++
T Consensus 4 ~~~nF~aG-Pa-~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~--~F~~i~~~~~~~Lr~Ll~~P~~y~-Vlfl~GggT 78 (364)
T PRK12462 4 NQLNFSGG-PG-ALPDTVLEQVRQAVVELPETGLSVLGMSHRSS--WFSSLLAQAEADLRDLLGIPDEYG-VVFLQGGSS 78 (364)
T ss_pred ccceecCC-Cc-CCCHHHHHHHHHHHhcccccCccccccccccH--HHHHHHHHHHHHHHHHhCCCCCCe-EEEEeccHH
Confidence 45677766 32 2356676667666544 1 112222 234566666677777777643333 445667799
Q ss_pred HHHHHHHHHccCCCCeEE--EcCCCchh-HHHHHHHcCCEEEEEEcCC-C--CCCCCHHHHHhhcccCCcEEEecCCCCC
Q 013883 181 EAIAATILGLINPGDEVI--LFAPFYDS-YEATLSMAGAKIKCITLRP-P--DFAIPIEELKSTISKNTRAILMNTPHNP 254 (434)
Q Consensus 181 ~ai~~~~~~l~~~gd~Vl--v~~p~y~~-~~~~~~~~G~~~~~v~~~~-~--~~~~d~~~l~~~i~~~~~~i~~~~p~NP 254 (434)
.+++++...++.+||+++ +..-.|.. ....++.+| ++..+.... . +.-++++.+ .+.++.+.|.+++-...
T Consensus 79 ~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETs 155 (364)
T PRK12462 79 LQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETV 155 (364)
T ss_pred HHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCC
Confidence 999999999999999654 45555544 345566777 554443211 1 234556665 23446778877766777
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHH
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~ 334 (434)
||+..+ ++.+.++.++|+|.+-..+. ....+..+ .+++.+.-|++|.+| ++.++.+++.++
T Consensus 156 tGv~~~--------~~~~~~~~llvvD~sS~~~s---~pid~~~~------dvi~agsQKnlgP~G--ltvvivs~~al~ 216 (364)
T PRK12462 156 EGLQFP--------DAAGLPDSPLIADMSSDFMS---RPFDVEAY------GMVYAHAQKNLGPAG--VTVAIIRRALLE 216 (364)
T ss_pred ceEecC--------cccccCCCeEEEEcCchhhC---CCCChHHc------cEEEeeccccCCCCc--eEEEEECHHHHh
Confidence 898875 22334689999999876542 22222222 367778889999888 788898887765
Q ss_pred HHHHH------------hhccccCCchHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHHHHhhhCC-CEee----cC
Q 013883 335 GVRQA------------HSFLTFATSTPMQWAATAALRAP-ET--YYEELKRDYSAKKAILVEGLNAVG-FKVF----PS 394 (434)
Q Consensus 335 ~l~~~------------~~~~~~~~~~~~q~a~~~~L~~~-~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~----~~ 394 (434)
+.... .....++++....+++..+|+.. ++ .++.+.++.+++.+.+++.+.+.. +-.. ..
T Consensus 217 ~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~ 296 (364)
T PRK12462 217 RVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAA 296 (364)
T ss_pred hccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhh
Confidence 43221 11234467777788877777653 33 688889999999999999999874 3221 12
Q ss_pred CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 395 SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
...|-+.+++... +...+|.+.+ ++.|+.-..|.
T Consensus 297 RS~mnv~f~~~~~--~l~~~f~~~a-~~~gl~~lkGh 330 (364)
T PRK12462 297 RSTMNVAFRFRQP--RLDTLFKEQS-TEAGFCGLSGH 330 (364)
T ss_pred cCcceEEEEcCCH--HHHHHHHHHH-HHCCCccccCC
Confidence 3445555554321 1244555554 56698877765
No 370
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.20 E-value=3.8e-09 Score=101.60 Aligned_cols=221 Identities=16% Similarity=0.097 Sum_probs=149.5
Q ss_pred cHHHHHHHHHHHHcCC-CCCCCCCCcH-HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEE---
Q 013883 124 PDFVKDAAIQAIRDGK-NQYARGHGVP-EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVI--- 198 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~-~~Y~~~~G~~-~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl--- 198 (434)
.+.+.+++.+++.... ..|.-..|.. +=...+++.+. +.. ..+ .+++++..+.|+.+++.++..++..|+
T Consensus 40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~---~~~-~ae-a~~ivnnn~aAVll~~~al~~~~EvVis~g 114 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLC---GLT-GAE-AAAIVNNNAAAVLLTLNALAEGKEVVVSRG 114 (395)
T ss_pred CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHh---ccc-chh-heeeECCcHHHHHHHHhhhccCCeEEEEcc
Confidence 5667777777766521 2333333322 11223444443 221 234 689999999999999998887544433
Q ss_pred --EcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCC-cccCCCHHHHHHHHHHHHHcC
Q 013883 199 --LFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNP-TGKMFTREELNVIASLCIEND 275 (434)
Q Consensus 199 --v~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NP-TG~~~~~e~l~~i~~la~~~~ 275 (434)
++ +..+...++++..|++++.|.... .-...+++.+|++++++++-+.-+|- ---.++ .++++++|++||
T Consensus 115 ~lV~-gg~~~v~d~~~~aG~~l~EvG~tn---~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~---~~~l~~ia~~~~ 187 (395)
T COG1921 115 ELVE-GGAFRVPDIIRLAGAKLVEVGTTN---RTHLKDYELAINENTALLLKVHSSNYGFTGMLS---EEELVEIAHEKG 187 (395)
T ss_pred cccc-CCCCChhHHHHHcCCEEEEecccC---cCCHHHHHHHhccCCeeEEEEeecccccccccc---HHHHHHHHHHcC
Confidence 23 688889999999999999987653 24678899999999999876655543 212333 455889999999
Q ss_pred cEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHH
Q 013883 276 VLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAA 355 (434)
Q Consensus 276 ~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~ 355 (434)
+++|+|.+-..... ..+.+..+.. .+-.++++|-.|.+| |.+.|.++++++++++++...-...+....+...+.
T Consensus 188 lpvivD~aSg~~v~--~e~~l~~~la-~GaDLV~~SgdKllg--GPqaGii~GkKelI~~lq~~~l~Ralrv~K~tla~l 262 (395)
T COG1921 188 LPVIVDLASGALVD--KEPDLREALA-LGADLVSFSGDKLLG--GPQAGIIVGKKELIEKLQSHPLKRALRVDKETLAAL 262 (395)
T ss_pred CCEEEecCCccccc--cccchhHHHh-cCCCEEEEecchhcC--CCccceEechHHHHHHHHhhhhhhhhhcCcHhHHHH
Confidence 99999998866542 1122222221 234578889999986 899999999999999887655444566666666666
Q ss_pred HHHHhC
Q 013883 356 TAALRA 361 (434)
Q Consensus 356 ~~~L~~ 361 (434)
.++|+.
T Consensus 263 ~~aLe~ 268 (395)
T COG1921 263 EAALEL 268 (395)
T ss_pred HHHHHH
Confidence 666654
No 371
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.14 E-value=1.7e-09 Score=102.20 Aligned_cols=300 Identities=18% Similarity=0.201 Sum_probs=192.2
Q ss_pred hcCCeeEeCCC-CCCCCCcHHHHHHHHHHHHcC---C----CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCC
Q 013883 107 IKHGAINLGQG-FPNFDGPDFVKDAAIQAIRDG---K----NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSG 178 (434)
Q Consensus 107 ~~~~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~---~----~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G 178 (434)
.+.+++||+.. +.++...+.+.+.+...++.- . .-|+...-+.+|.+.||++++ .++.|+...|
T Consensus 92 ~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G--------~E~aivYs~g 163 (467)
T KOG1358|consen 92 DGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG--------TEDAIVYSYG 163 (467)
T ss_pred cCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC--------Ccceeeeccc
Confidence 34578899775 777888899999888888762 1 236666667789999999987 3435666666
Q ss_pred hHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCC-------------cE
Q 013883 179 CTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNT-------------RA 245 (434)
Q Consensus 179 ~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~-------------~~ 245 (434)
..++..++.++++.||.|.+..-..+.....++...-.+..+..+ |+++++..+.+.+ +.
T Consensus 164 -F~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn------dm~~lerll~E~~~~~~K~~k~~~~Rrf 236 (467)
T KOG1358|consen 164 -FSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN------DMEDLERLLPEQEDEDQKNPKKALTRRF 236 (467)
T ss_pred -cchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC------CHHHHHHhccCcchhhhhccccccceEE
Confidence 778888899999999999999999988988888887777766544 5667766553311 23
Q ss_pred EEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCC--CCCCceEEEccCChhhcccccee
Q 013883 246 ILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLP--GMYERTVTMNSLGKTFSLTGWKI 323 (434)
Q Consensus 246 i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~--~~~~~~i~i~S~SK~~g~~G~R~ 323 (434)
|++..---+||.+.+ +.+|+++..++...+|.||.|+....+.....+.... +..+-.++++|+.-+++-.|
T Consensus 237 iv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G--- 310 (467)
T KOG1358|consen 237 IVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG--- 310 (467)
T ss_pred EEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---
Confidence 445556777998885 5668888999999999999998766554333222221 12355688889998887454
Q ss_pred eeEEeChhhHHHHHHHhhccccCC--chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEE
Q 013883 324 GWAIAPPHLTWGVRQAHSFLTFAT--STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFV 400 (434)
Q Consensus 324 G~~~~~~~~~~~l~~~~~~~~~~~--~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 400 (434)
|+.+++.-+++.-+.-.....|+. ++....++..++.- .++-.++.+.++.....+-+.|... ++.+....-....
T Consensus 311 gFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i-~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~ 389 (467)
T KOG1358|consen 311 GFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILI-EEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPII 389 (467)
T ss_pred ceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHH-HhhCcchhhhhhccccccchhhhcCCceEEecCcCCcee
Confidence 787775544432221111122333 33344444445543 2333345556666666666777664 5666654444444
Q ss_pred eeecCC-CCC-CCH----HHHHHHHHHhcCeEEEC
Q 013883 401 VVDHTP-FGH-ETD----IAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 401 ~~~~~~-~~~-~~~----~~~~~~Ll~~~GV~v~p 429 (434)
.+.+.+ .+. ++. ++++++.+.+ |+.++-
T Consensus 390 hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~ 423 (467)
T KOG1358|consen 390 HLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTR 423 (467)
T ss_pred eeeecccccchHHHHHHHHHHHHHHHhh-cceehh
Confidence 444433 111 111 3455555555 776653
No 372
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.13 E-value=1.8e-08 Score=109.19 Aligned_cols=279 Identities=14% Similarity=0.135 Sum_probs=163.6
Q ss_pred eCCCCCCCCCcHHHHHHHHHHHH--cCCCCCCCC--CCc----HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 114 LGQGFPNFDGPDFVKDAAIQAIR--DGKNQYARG--HGV----PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 114 l~~g~p~~~~~~~v~~~~~~~~~--~~~~~Y~~~--~G~----~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
++.|+=+.-.|+.+.+.+.+..+ ...+.|.+- +|. .+++..++++++ .+++ ++.+..+++++.++
T Consensus 108 iG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG------~~~a-naSL~d~aTAaaea 180 (993)
T PLN02414 108 IGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTG------LPMS-NASLLDEGTAAAEA 180 (993)
T ss_pred cCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhC------CChh-hEeecCChHHHHHH
Confidence 35564333455666555544332 122334432 343 345555666554 5566 89999999999998
Q ss_pred HHHHc-cCCC--CeEEEcCCCchhHHHHH----HHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccC
Q 013883 186 TILGL-INPG--DEVILFAPFYDSYEATL----SMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258 (434)
Q Consensus 186 ~~~~l-~~~g--d~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~ 258 (434)
++.++ +++| |+|++++-.|+.+...+ +..|++++.++.+.. + ...+.+..+++..| |.+|.+
T Consensus 181 ~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~----~------~~~~~v~~vlvq~P-~~~G~v 249 (993)
T PLN02414 181 MAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF----D------YSSGDVCGVLVQYP-ATDGEV 249 (993)
T ss_pred HHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh----c------cccCceEEEEEecC-CCCeEE
Confidence 87766 4544 78999999999876655 446999999887521 1 11123334444333 459998
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhh---ccccceeeeEEeChhhHHH
Q 013883 259 FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTF---SLTGWKIGWAIAPPHLTWG 335 (434)
Q Consensus 259 ~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~---g~~G~R~G~~~~~~~~~~~ 335 (434)
. ++++|+++|+++|+++++ .+... ... .+.. ++..+-.+++++--|.. |..|.++|++++.+++.+.
T Consensus 250 ~---dv~~I~~~ah~~GaL~iV-aad~l-al~----~l~~-pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~ 319 (993)
T PLN02414 250 L---DYAEFVKNAHANGVKVVM-ATDLL-ALT----MLKP-PGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRL 319 (993)
T ss_pred c---CHHHHHHHHHHcCCEEEE-EECHH-Hhc----CCCC-HhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhh
Confidence 7 577899999999999999 33321 111 1111 22234457788877765 3356779999998776543
Q ss_pred HHH-Hh-----------------------hccccCCchHHHHHHHHHH------hCChHHHHHHHHHHHHHHHHHHHHhh
Q 013883 336 VRQ-AH-----------------------SFLTFATSTPMQWAATAAL------RAPETYYEELKRDYSAKKAILVEGLN 385 (434)
Q Consensus 336 l~~-~~-----------------------~~~~~~~~~~~q~a~~~~L------~~~~~~~~~~~~~~~~~~~~l~~~L~ 385 (434)
+-. +. +....+.+.....++.+.+ ......+++..+++.++..++.+.|+
T Consensus 320 ~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~ 399 (993)
T PLN02414 320 MPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLK 399 (993)
T ss_pred CCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHh
Confidence 310 00 0001111221111221111 11234577778888999999999998
Q ss_pred hCCCEeecCCeeEE--EeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 386 AVGFKVFPSSGTYF--VVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 386 ~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
+.|+++..+ .+| +.+.+ + +..++.++|.++ ||.+.
T Consensus 400 ~~G~~~~~~--~~f~~vt~~~---~--~~~~v~~~L~~~-gI~l~ 436 (993)
T PLN02414 400 KLGFQVQSL--PFFDTVKVKC---S--DADAIADAAAKV-GINLR 436 (993)
T ss_pred hcCCccCCC--CCcCeEEEec---C--CHHHHHHHHHHC-CCeeE
Confidence 889887533 222 12222 1 457788888654 98765
No 373
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.10 E-value=2.8e-08 Score=108.14 Aligned_cols=281 Identities=14% Similarity=0.173 Sum_probs=168.6
Q ss_pred eCCCCCCCCCcHHHHHHHHHHHHcC--CCCCCCCC-----CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 114 LGQGFPNFDGPDFVKDAAIQAIRDG--KNQYARGH-----GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 114 l~~g~p~~~~~~~v~~~~~~~~~~~--~~~Y~~~~-----G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
++.|+=+.-.|+.+.+.+ +++. ...|.|.+ |..+..-...+.+.+..| .+.. ++.+..+++++.+.+
T Consensus 81 ig~G~y~~~~P~vi~~~i---~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG--~~~a-naSl~d~aTAa~ea~ 154 (954)
T PRK05367 81 IGQGYYGTHTPPVILRNI---LENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTG--LEIA-NASLLDEATAAAEAM 154 (954)
T ss_pred cCCCCCCCcCcHHHHHHH---HhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHC--CChh-hccccccHHHHHHHH
Confidence 466733333344443333 2332 24566644 544444444444444445 4455 799999999999988
Q ss_pred HHHc-cCC--CCeEEEcCCCchhHHHH----HHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCC
Q 013883 187 ILGL-INP--GDEVILFAPFYDSYEAT----LSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMF 259 (434)
Q Consensus 187 ~~~l-~~~--gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~ 259 (434)
+.++ ..+ +|+|++++-.|+..... ++..|++++.++.+. |++ .+++.++++.+| |-+|.+.
T Consensus 155 ~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~-----d~~------~~~~~~vlvq~p-~~~G~i~ 222 (954)
T PRK05367 155 ALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK-----ALD------HDDVFGVLLQYP-GTSGEVR 222 (954)
T ss_pred HHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc-----CCC------cccEEEEEEecC-CCCeeec
Confidence 8776 344 48999999999987765 356899999998753 111 224545555565 7799987
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChh---hccccceeeeEEeChhhHHHH
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKT---FSLTGWKIGWAIAPPHLTWGV 336 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~---~g~~G~R~G~~~~~~~~~~~l 336 (434)
++++|+++|+++|+++++|.....+.. ...++..+-.+++++.-|. +|+.|.-+|++.+++++.+++
T Consensus 223 ---d~~~i~~~ah~~Gal~~vda~~~Al~~-------l~~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~l 292 (954)
T PRK05367 223 ---DYTALIAAAHARGALVAVAADLLALTL-------LTPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSM 292 (954)
T ss_pred ---cHHHHHHHHHHcCCEEEEEehhhhccC-------CCChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhC
Confidence 478899999999999999874422211 1112333455778888886 123355599999987766544
Q ss_pred HH--H-----------------------hh-ccccCCchHH-HHHHHH--HHh-CChHHHHHHHHHHHHHHHHHHHHhhh
Q 013883 337 RQ--A-----------------------HS-FLTFATSTPM-QWAATA--ALR-APETYYEELKRDYSAKKAILVEGLNA 386 (434)
Q Consensus 337 ~~--~-----------------------~~-~~~~~~~~~~-q~a~~~--~L~-~~~~~~~~~~~~~~~~~~~l~~~L~~ 386 (434)
.. + ++ ..+.+.+... ..++.+ ++. .....++++.++...+.+++.+.|++
T Consensus 293 pgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~ 372 (954)
T PRK05367 293 PGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA 372 (954)
T ss_pred CCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 10 0 00 0122222211 111111 111 23456788888889999999999988
Q ss_pred CCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEE
Q 013883 387 VGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 387 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v 427 (434)
.|+++..+ .+|-.+.+. .+ .+..++.++|+++ ||.+
T Consensus 373 ~G~~~~~~--~~f~~~~~~-~~-~~~~~i~~~l~~~-gi~~ 408 (954)
T PRK05367 373 LGLEVVHD--SFFDTLTVE-VG-GDAAAVLARALAA-GINL 408 (954)
T ss_pred cCcccCCC--CCCCeEEEe-CC-CCHHHHHHHHHHC-Ccee
Confidence 88886533 222111111 12 2577888888765 8876
No 374
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.98 E-value=1e-09 Score=104.72 Aligned_cols=210 Identities=18% Similarity=0.141 Sum_probs=57.9
Q ss_pred CCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCC------chhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccC
Q 013883 169 PEKEVTVTSGCTEAIAATILGLINPGDEVILFAPF------YDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKN 242 (434)
Q Consensus 169 ~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~------y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~ 242 (434)
.+ ..+++|+...|+.+++.++.. |.+|++..-. -+-..+++...|++++.|...+. -.+++++++|+++
T Consensus 62 Ae-aA~VvNnnaAAv~L~l~~la~-~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN~---t~~~Dye~AI~e~ 136 (367)
T PF03841_consen 62 AE-AALVVNNNAAAVLLALNTLAK-GKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTNR---THLSDYEKAITEN 136 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc-ccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc---ccccccccccccc
Confidence 45 577888888999988888864 5677765432 22256778889999999987642 2478899999999
Q ss_pred CcEEEecCCCCCc--ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccc----cC-CCCccccCCCCCCCceEEEccCChh
Q 013883 243 TRAILMNTPHNPT--GKMFTREELNVIASLCIENDVLVFSDEVYDKLA----FE-MDHISIASLPGMYERTVTMNSLGKT 315 (434)
Q Consensus 243 ~~~i~~~~p~NPT--G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~----~~-~~~~~~~~~~~~~~~~i~i~S~SK~ 315 (434)
|.+++..++.|-. |..- .-.++++++++++|++++|+|-.-..+. |+ ...+.+..... .+-.+++.|-.|.
T Consensus 137 Ta~ll~Vh~Sn~~i~GFt~-~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~-~GaDlV~fSGdKl 214 (367)
T PF03841_consen 137 TAALLKVHTSNFRIQGFTG-EVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLA-AGADLVTFSGDKL 214 (367)
T ss_dssp -------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCC-CT-SEEEEETTSS
T ss_pred ccccccccccccccccccc-cccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhh-cCCCEEEEECCCc
Confidence 9999988887763 3321 1257889999999999999998764332 11 01223333332 2445888899999
Q ss_pred hccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC---h---------HHHHHHHHHHHHHHHHHHHH
Q 013883 316 FSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP---E---------TYYEELKRDYSAKKAILVEG 383 (434)
Q Consensus 316 ~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~---~---------~~~~~~~~~~~~~~~~l~~~ 383 (434)
+| |...|.+++++++++++++..-...+-..-....++.+.|+.. + ..+....+.++++.+.+.+.
T Consensus 215 LG--GPQaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~ 292 (367)
T PF03841_consen 215 LG--GPQAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQ 292 (367)
T ss_dssp SS--S-S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH----------------------------------
T ss_pred CC--CCCeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccc
Confidence 87 7789999999999999987766667777777777766666532 1 12334456677777777777
Q ss_pred hhhC
Q 013883 384 LNAV 387 (434)
Q Consensus 384 L~~~ 387 (434)
|+..
T Consensus 293 l~~~ 296 (367)
T PF03841_consen 293 LKAA 296 (367)
T ss_dssp ----
T ss_pred cccc
Confidence 7654
No 375
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.98 E-value=4.9e-08 Score=91.49 Aligned_cols=285 Identities=20% Similarity=0.213 Sum_probs=179.3
Q ss_pred HHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccC-----CCCeEEEcCCCc
Q 013883 130 AAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLIN-----PGDEVILFAPFY 204 (434)
Q Consensus 130 ~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~-----~gd~Vlv~~p~y 204 (434)
....++-.+...|....+...|.+++.+.++ -+ .++-+.-+..|-..++..+++ ||.+..+++..|
T Consensus 63 ~qwaamm~GDEAYagsrs~~~L~~avkdifG--------fq-~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~ 133 (471)
T COG3033 63 KQWAAMMRGDEAYAGSRSYYALADAVKDIFG--------FQ-YTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYH 133 (471)
T ss_pred HHHHHHhccchhhcccccHHHHHHHHHHhcC--------ce-eeeeccCCccHHHHHHHHHhhhccccCCccccccccce
Confidence 3334555667789999999999999888876 23 566676666666666665554 454555566666
Q ss_pred hh-HHHHHHHcCCEEEEEEcCCC---------CCCCCHHHHHhhccc----CCcEEEec-CCCCCcccCCCHHHHHHHHH
Q 013883 205 DS-YEATLSMAGAKIKCITLRPP---------DFAIPIEELKSTISK----NTRAILMN-TPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 205 ~~-~~~~~~~~G~~~~~v~~~~~---------~~~~d~~~l~~~i~~----~~~~i~~~-~p~NPTG~~~~~e~l~~i~~ 269 (434)
+. .....+..|+.++.++.++. .+.+|++.|++.|.+ +...|+++ +.|.--|...|.+.++++.+
T Consensus 134 FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ 213 (471)
T COG3033 134 FDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYE 213 (471)
T ss_pred ecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHH
Confidence 55 44557788998888887641 256899999999976 34455443 44556688999999999999
Q ss_pred HHHHcCcEEEEcCcCC-cccc-----C--CCCccccCCCCC--CCceEEEccCChhhccccceeeeEEeChh----hHHH
Q 013883 270 LCIENDVLVFSDEVYD-KLAF-----E--MDHISIASLPGM--YERTVTMNSLGKTFSLTGWKIGWAIAPPH----LTWG 335 (434)
Q Consensus 270 la~~~~~~iI~Deay~-~~~~-----~--~~~~~~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~~~~~~~----~~~~ 335 (434)
+|++|++.++.|.+-. +-.| + -..+++..+... .--.-+..|.-|. |+.-. .|+++.+.+ +-..
T Consensus 214 ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~ 291 (471)
T COG3033 214 IAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKD-GLVNM-GGFLCFKDDSFFDVYEE 291 (471)
T ss_pred HHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccc-ceecc-ccEEEecCccHHHHHHH
Confidence 9999999999998632 1111 0 012233222100 0001233444453 33321 267776654 4444
Q ss_pred HHHHhh----cccc-CCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCC-
Q 013883 336 VRQAHS----FLTF-ATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF- 407 (434)
Q Consensus 336 l~~~~~----~~~~-~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~- 407 (434)
++...- ..++ +...-...+++.-|.+. .+|+++... ..++|.+.|++.|++++.|.||.-+|++..++
T Consensus 292 ~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~----Qv~YL~~~l~~~GVpi~~paGGHavfvda~~~l 367 (471)
T COG3033 292 CRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVA----QVQYLADGLEEAGVPIVQPAGGHAVFVDAGKFL 367 (471)
T ss_pred HHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHH----HHHHHHHHHHhcCCeeEecCCCceEEeehhhhc
Confidence 443221 1112 22333455666666653 466665444 45678889999999999999999888874221
Q ss_pred -----CCCCHHHHHHHHHHhcCeEEEC
Q 013883 408 -----GHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 408 -----~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
..-.+..|+..|..+.||-.+-
T Consensus 368 phip~eqFpaqala~ely~e~GiRavE 394 (471)
T COG3033 368 PHIPAEQFPAQALACELYKEAGIRAVE 394 (471)
T ss_pred CCCChhhCcHHHHHHHHHHHhCeeeee
Confidence 1224678888898999987653
No 376
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.95 E-value=8.7e-08 Score=92.09 Aligned_cols=300 Identities=15% Similarity=0.145 Sum_probs=182.0
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE--cCChHH--
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYAR---GHGVPEFNSAIASRFKKDSGLEVDPEKEVTV--TSGCTE-- 181 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~--t~G~~~-- 181 (434)
...|.|+.-...+++.-....+.-..+. ..+-|.| .+|+.++...+.+||....|.+ .|.+ .+|++.
T Consensus 66 ~~m~PLGSCTMK~Np~~e~~~~~~p~f~-~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~D-----avsLQP~AGAqGE~ 139 (496)
T COG1003 66 RGMIPLGSCTMKLNPKAEMKPATWPEFA-NIHPFQPEEQVQGYLELIYELQEWLKEITGMD-----AVSLQPNAGAQGEY 139 (496)
T ss_pred cCccCCcccccccCchhhcccccccchh-hcCCCCChHHHHHHHHHHHHHHHHHHHhcCCc-----eeeccCCCCcchhh
Confidence 3567776665555553332222211111 1344555 3588899999999999888763 3333 345443
Q ss_pred HHHHHHHHc-cCC----CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcc
Q 013883 182 AIAATILGL-INP----GDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTG 256 (434)
Q Consensus 182 ai~~~~~~l-~~~----gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG 256 (434)
+..+++++. -.. .+++++++-.+......+.+.|.+|+.|+.++ ++.+|+|+|++.+.+++.++.+++|+ -.|
T Consensus 140 aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~-~G~VDlddLk~k~~~~~AalMiTnPs-T~G 217 (496)
T COG1003 140 AGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDE-NGNVDLDDLRAKAEDNLAALMITNPS-TLG 217 (496)
T ss_pred HHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCC-CCCccHHHHHHHhccceeEEEeccCc-ccc
Confidence 223334444 222 36799999999988888999999999999986 78999999999999999999998873 345
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhh----ccccceeeeEEeChhh
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTF----SLTGWKIGWAIAPPHL 332 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~----g~~G~R~G~~~~~~~~ 332 (434)
+ =.+++++|+++.+++|-.+..|.|--.-..+-..+ .+.+.. ++=--+.|+| |-.|...|=+.+++++
T Consensus 218 v--FE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rP-----Gd~G~D-V~HlNLHKTF~iPHGGGGPG~GPvgVk~~L 289 (496)
T COG1003 218 V--FEEDIREICEIVHEAGGQVYYDGANLNAIVGLARP-----GDMGFD-VVHLNLHKTFCIPHGGGGPGAGPVGVKAHL 289 (496)
T ss_pred c--chhhHHHHHHHHHHcCCEEEecCcchhhhhccccc-----cccccc-eEEeecccccccCCCCCCCCCCceehHhhc
Confidence 3 36789999999999999999998864322221111 111222 2223455665 3345556666655444
Q ss_pred HHHHHH------Hhh--------------ccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEe
Q 013883 333 TWGVRQ------AHS--------------FLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKV 391 (434)
Q Consensus 333 ~~~l~~------~~~--------------~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 391 (434)
...+-. ... ...++.-.....+....+..+.+.+++..+...-+.+++.+.|+.. .+..
T Consensus 290 ~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~y 369 (496)
T COG1003 290 APFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVPY 369 (496)
T ss_pred cccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCcccc
Confidence 332211 000 0122323333444444444556678887777777889999999863 2222
Q ss_pred ecCC-eeEEEeeecCC----CCCCCHHHHHHHHHHhcCeE
Q 013883 392 FPSS-GTYFVVVDHTP----FGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 392 ~~~~-~~~~~~~~~~~----~~~~~~~~~~~~Ll~~~GV~ 426 (434)
.+.. -..=+.++..+ .|+ +..+++++|++ +|+.
T Consensus 370 ~~~~~~~HE~ild~r~l~~~~Gv-~~~DvAKrLlD-~GfH 407 (496)
T COG1003 370 TGENRVAHECILDARPLKKETGV-RALDVAKRLLD-YGFH 407 (496)
T ss_pred CCCCcceeEEEeechHhHhhcCC-cHHHHHHHHHh-cCCC
Confidence 2221 11112334332 244 57899999986 5864
No 377
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.91 E-value=1.6e-06 Score=90.10 Aligned_cols=278 Identities=13% Similarity=0.126 Sum_probs=167.4
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccC--------------------------
Q 013883 139 KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLIN-------------------------- 192 (434)
Q Consensus 139 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~-------------------------- 192 (434)
...|....+...+.+.+.+++.+..|.+- . .=.+|+|+++|+..++....+
T Consensus 112 ~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~-~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n 188 (608)
T TIGR03811 112 NVAYESSPATSQMEEEVGKEFATLMGYKN--G-WGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLN 188 (608)
T ss_pred CCccccCchHHHHHHHHHHHHHHHhCCCC--C-CeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcc
Confidence 34444444667899999999999998753 2 234678888877654433211
Q ss_pred --------------------------CCC------eEEEcCCCchhHHHHHHHcCC---EEEEEEcCCCCCCCCHHHHHh
Q 013883 193 --------------------------PGD------EVILFAPFYDSYEATLSMAGA---KIKCITLRPPDFAIPIEELKS 237 (434)
Q Consensus 193 --------------------------~gd------~Vlv~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~d~~~l~~ 237 (434)
+|. .++++.-.|..+...+..+|+ +++.||+++ ++.+|++.|++
T Consensus 189 ~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~-~~rmd~~~L~~ 267 (608)
T TIGR03811 189 MPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDS-NYRMDINELEK 267 (608)
T ss_pred cccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCC-CCcCCHHHHHH
Confidence 000 477778889999999999999 589999985 78999999999
Q ss_pred hccc----C--CcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCc--EEEEcCcCCccc---c-CCC--Ccccc------
Q 013883 238 TISK----N--TRAILMNTPHNPTGKMFTREELNVIASLCIENDV--LVFSDEVYDKLA---F-EMD--HISIA------ 297 (434)
Q Consensus 238 ~i~~----~--~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~--~iI~Deay~~~~---~-~~~--~~~~~------ 297 (434)
.|.+ + +-+|+-+...-.+|.+=+.+++.+|++.++++|+ |+.+|.||+++. + +.. ..+..
T Consensus 268 ~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~ 347 (608)
T TIGR03811 268 IIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVH 347 (608)
T ss_pred HHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhccc
Confidence 8864 2 2334555668889988776665555555578898 699999999853 1 110 00000
Q ss_pred -------------------CCCCCCCceEEEccCChhhccccceeeeEEeCh-hhHHHHHHHhhcc--------------
Q 013883 298 -------------------SLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP-HLTWGVRQAHSFL-------------- 343 (434)
Q Consensus 298 -------------------~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~-~~~~~l~~~~~~~-------------- 343 (434)
.+.+...-.=+...+.|.+. .-...|.++.+. ++.+.+.....+.
T Consensus 348 ~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~ 426 (608)
T TIGR03811 348 AEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAY 426 (608)
T ss_pred ccccccccccccccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeCHHHHHHHhcCcchhccccccCccccccc
Confidence 01111111224457889876 456788777764 3333221100000
Q ss_pred ccCCchHH-----HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC-------CEe---ecCCeeEEEeeecCCCC
Q 013883 344 TFATSTPM-----QWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG-------FKV---FPSSGTYFVVVDHTPFG 408 (434)
Q Consensus 344 ~~~~~~~~-----q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-------~~~---~~~~~~~~~~~~~~~~~ 408 (434)
....+.+. .+++...+.-..+.+.++.++..+.++.+.+.|++.+ +++ .+|+-++.+|. +.+.+
T Consensus 427 ~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr-~~~~g 505 (608)
T TIGR03811 427 ILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYV-FNEKG 505 (608)
T ss_pred ceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEE-EecCC
Confidence 11122222 2233333322456678888888888999988887742 443 45666665544 33334
Q ss_pred CCC---HHHHHHHHHHh
Q 013883 409 HET---DIAFCEYLIKE 422 (434)
Q Consensus 409 ~~~---~~~~~~~Ll~~ 422 (434)
..+ ..++-+++.++
T Consensus 506 ~~~l~~~n~ln~~i~~~ 522 (608)
T TIGR03811 506 NDDLVKMNKLNHAFYDY 522 (608)
T ss_pred CccHHHHHHHHHHHHHh
Confidence 321 33455555554
No 378
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.87 E-value=5.3e-08 Score=89.06 Aligned_cols=251 Identities=13% Similarity=0.117 Sum_probs=154.1
Q ss_pred cEEEcCChHHHHHHHHHHcc--CCCCeEEEcCCCchhHHHHH-HHc------C-----CEEEEEEcCCCC----C-----
Q 013883 172 EVTVTSGCTEAIAATILGLI--NPGDEVILFAPFYDSYEATL-SMA------G-----AKIKCITLRPPD----F----- 228 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~-~~~------G-----~~~~~v~~~~~~----~----- 228 (434)
-++++|+++||..++++... .....|++.+..|++|.... +.. | -+.+.|..-++- +
T Consensus 104 vc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~ 183 (452)
T KOG1403|consen 104 VCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMY 183 (452)
T ss_pred EEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccC
Confidence 67889999999999987653 23334666666777664431 110 1 122222111110 0
Q ss_pred ------CCCHHHHHhhccc------CCcEEEecCCCCCcccCCCH-HHHHHHHHHHHHcCcEEEEcCcCCccccCCCCc-
Q 013883 229 ------AIPIEELKSTISK------NTRAILMNTPHNPTGKMFTR-EELNVIASLCIENDVLVFSDEVYDKLAFEMDHI- 294 (434)
Q Consensus 229 ------~~d~~~l~~~i~~------~~~~i~~~~p~NPTG~~~~~-e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~- 294 (434)
..=.|.+++.+++ +..+.+-.+-+.-.|.++|+ ...+++++..+.+|-+.|.||++.+|..-|.+.
T Consensus 184 ~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyW 263 (452)
T KOG1403|consen 184 PDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYW 263 (452)
T ss_pred CcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhh
Confidence 0112334443322 23333444446666765554 559999999999999999999999987655443
Q ss_pred cccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHH--HhhccccCCchHHHHHHHHHHhCChHHHHHHHHH
Q 013883 295 SIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQ--AHSFLTFATSTPMQWAATAALRAPETYYEELKRD 372 (434)
Q Consensus 295 ~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~--~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~ 372 (434)
++... +-+--|-++.|.+| .|..++.+++.+++.+.+.. +..+.+|+.++.+.++..++|+..++ +++.+.
T Consensus 264 afq~y----~fiPDIVtmgKpmG-NGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~--E~Lq~h 336 (452)
T KOG1403|consen 264 AFQTY----NFIPDIVTMGKPMG-NGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCED--ENLQEH 336 (452)
T ss_pred hhhhh----ccccchheecccCC-CCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhh--hhHHHH
Confidence 32222 22223678899999 99999999999999888754 44456889999999999888886421 334444
Q ss_pred HHHHHHHHHHHhhhCC--CEee--cCCeeEEEeeecCCCC------CCCHHHHHHHHHHhcCeEEEC
Q 013883 373 YSAKKAILVEGLNAVG--FKVF--PSSGTYFVVVDHTPFG------HETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 373 ~~~~~~~l~~~L~~~g--~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~Ll~~~GV~v~p 429 (434)
..+.-+.|...|+++. .+++ ....|.|+-+++.+.. ...+..++.+|.+.+||++..
T Consensus 337 a~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsa 403 (452)
T KOG1403|consen 337 AQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSA 403 (452)
T ss_pred HHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEec
Confidence 4555555655555542 3333 2345777777764321 112334667787888898864
No 379
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.86 E-value=2.5e-06 Score=82.28 Aligned_cols=262 Identities=16% Similarity=0.246 Sum_probs=162.2
Q ss_pred eCCCCCCCCCcHHHHHHHHHHHHcC--CCCCCCCC-----CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 114 LGQGFPNFDGPDFVKDAAIQAIRDG--KNQYARGH-----GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 114 l~~g~p~~~~~~~v~~~~~~~~~~~--~~~Y~~~~-----G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
+|.|+=+.-.|+.+.+.+ +++. ...|.|.+ |..+..=..+..+....|.++. +--+--+++.+-+++
T Consensus 80 iG~GyY~~~~P~vI~rni---le~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VA---NASm~DeaTAaAEAm 153 (450)
T COG0403 80 IGAGYYDTYTPPVILRNI---LENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVA---NASMLDEATAAAEAM 153 (450)
T ss_pred ccCcccCCcCcHHHHHHh---hcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcc---cchhhhhHHHHHHHH
Confidence 467754445566555333 3332 24577754 4333333334444445566654 334455666666655
Q ss_pred HHHc---cCCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCC
Q 013883 187 ILGL---INPGDEVILFAPFYDSYEATLSM----AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMF 259 (434)
Q Consensus 187 ~~~l---~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~ 259 (434)
+.+. ..+..+++|+.-.|+.+.+.++. +|.+++.++.+ |++.+++....++.++++..|+ -.|..
T Consensus 154 ~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~------d~~~l~~~~~~~~~gv~vQyP~-~~G~~- 225 (450)
T COG0403 154 LMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD------DLDDLESADDGDVFGVLVQYPN-TFGIV- 225 (450)
T ss_pred HHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc------hhhhhhhccccCeEEEEEecCC-CCCcc-
Confidence 5554 23358999999999999888764 56777777665 7888888832377889988885 56633
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEcc---CChhhccccceeeeEEeChhhHHH-
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNS---LGKTFSLTGWKIGWAIAPPHLTWG- 335 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S---~SK~~g~~G~R~G~~~~~~~~~~~- 335 (434)
.+++++|.+.+++++.++++ +.+. -...+..-++..+-.|++++ |.=-+|..|..+||+.+.+++.++
T Consensus 226 -~~d~~~l~~~~h~~~al~~v---~aDp----laL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~m 297 (450)
T COG0403 226 -EEDLRALIEAAHSAGALVIV---AADP----LALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQM 297 (450)
T ss_pred -chhHHHHHHHHhhcCCEEEE---Eech----hHhhccCCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcC
Confidence 34799999999999998887 2211 12234444555566677765 555567678899999987766442
Q ss_pred ---------------------------HHHHhhccccCCchHHH--HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh
Q 013883 336 ---------------------------VRQAHSFLTFATSTPMQ--WAATAALRAPETYYEELKRDYSAKKAILVEGLNA 386 (434)
Q Consensus 336 ---------------------------l~~~~~~~~~~~~~~~q--~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~ 386 (434)
+++-+...+.|.+.... .++..+.-.+.+.++++..+..+...++.+.|++
T Consensus 298 PGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~ 377 (450)
T COG0403 298 PGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKE 377 (450)
T ss_pred CCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22222222233332221 1222222235677899999999999999999996
Q ss_pred C--CCEeecCCeeEE
Q 013883 387 V--GFKVFPSSGTYF 399 (434)
Q Consensus 387 ~--g~~~~~~~~~~~ 399 (434)
. |+++... .||
T Consensus 378 ~~~g~~~~~~--~fF 390 (450)
T COG0403 378 IGAGVELVFD--HFF 390 (450)
T ss_pred cCCceEeccc--cce
Confidence 5 5776544 444
No 380
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.86 E-value=8.7e-07 Score=95.30 Aligned_cols=283 Identities=13% Similarity=0.194 Sum_probs=165.0
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHcC--CCCCCCCC-----CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 115 GQGFPNFDGPDFVKDAAIQAIRDG--KNQYARGH-----GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 115 ~~g~p~~~~~~~v~~~~~~~~~~~--~~~Y~~~~-----G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+.|+=+.-.|+.+.+.+. .+. ...|.|.+ |..+..=.....+.+..|.++. +.-+..+++++.++++
T Consensus 70 g~G~y~~~~p~~i~r~v~---~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~a---NaSl~d~atA~aEa~~ 143 (939)
T TIGR00461 70 GMGYYGTILPPVIQRNLL---ENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVA---NASLLDEGTAAAEAMA 143 (939)
T ss_pred CCCcCCCcCChHHHHHHH---hCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChh---hhhccchhhHHHHHHH
Confidence 667333334555554332 332 24566644 5444444445555555565543 5667777788777666
Q ss_pred HHcc---CCCCeEEEcCCCchhHHHHHH----HcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCC
Q 013883 188 LGLI---NPGDEVILFAPFYDSYEATLS----MAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFT 260 (434)
Q Consensus 188 ~~l~---~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~ 260 (434)
.+.. +++++|+|++-.|+.+...++ ..|.+++.++ ++++++.+ ++.++++.+| |-+|.+-
T Consensus 144 ~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~---------~~~l~~~~--~~~~v~~q~P-n~~G~ie- 210 (939)
T TIGR00461 144 LSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD---------CSDIKKAV--DVFGCLLQYP-ATDGSIL- 210 (939)
T ss_pred HHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc---------HHHHhhcC--CEEEEEEECC-CCCeEEe-
Confidence 6542 234899999999988876655 6888888773 44566555 5677778788 5678775
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEc---cCChhhccccceeeeEEeChhhHHHH-
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMN---SLGKTFSLTGWKIGWAIAPPHLTWGV- 336 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~---S~SK~~g~~G~R~G~~~~~~~~~~~l- 336 (434)
++++|+++++++|.+++++.--..+ .+..-++..+-.|+++ +|+=-+|..|.-.|++.+++++.+++
T Consensus 211 --d~~~i~~~~h~~gal~~~~ad~~al-------~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lP 281 (939)
T TIGR00461 211 --DYKQLIDALHSHKSLVSVAADLMAL-------TLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMP 281 (939)
T ss_pred --cHHHHHHHHHHcCCEEEEEechHHh-------CCcCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCC
Confidence 6889999999999999984422211 1111222223334443 23332333465678887766554432
Q ss_pred ---------------------------HHHhhccccCCchHHHH-HHHH-HHhCChHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 337 ---------------------------RQAHSFLTFATSTPMQW-AATA-ALRAPETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 337 ---------------------------~~~~~~~~~~~~~~~q~-a~~~-~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
++.+...+.+.+..... ++.. +.-...+.++++.++...+..++.+.|++.
T Consensus 282 grivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~ 361 (939)
T TIGR00461 282 GRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND 361 (939)
T ss_pred CCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 11111111222222211 1122 223356678888888999999999999999
Q ss_pred CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 388 GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 388 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
|+++..+ .||--+.+. .+..+..++.++|+++ ||.+..
T Consensus 362 G~~~~~~--~fF~~~~v~-~~~~~~~~i~~~~~~~-gi~l~~ 399 (939)
T TIGR00461 362 PHELINK--TWFDTLTVK-VGNGISSELLKAAEEF-NINLRA 399 (939)
T ss_pred CCcccCC--CccceEEEE-eCCCCHHHHHHHHHHC-CCeeee
Confidence 9887654 444222221 1212467888888665 998764
No 381
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.85 E-value=6.8e-07 Score=86.81 Aligned_cols=268 Identities=15% Similarity=0.165 Sum_probs=169.7
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc----C-CC---CeEEEcCCCchhHHHHHHHcCCEE
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI----N-PG---DEVILFAPFYDSYEATLSMAGAKI 218 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~----~-~g---d~Vlv~~p~y~~~~~~~~~~G~~~ 218 (434)
+..++..+....+...++.+-+ . .=..|.|+++++.++-.... . .| ..++.+...+..+......++.++
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~~~-~-~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l 194 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAPSD-S-CGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL 194 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCCcc-c-cCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEE
Confidence 4567888888888877765522 2 34668899999666544331 1 22 357777778888888999999999
Q ss_pred EEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHH-cCcEEEEcCcCCccccC--CCCcc
Q 013883 219 KCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE-NDVLVFSDEVYDKLAFE--MDHIS 295 (434)
Q Consensus 219 ~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~-~~~~iI~Deay~~~~~~--~~~~~ 295 (434)
..||+++.++.+|+..+.+.+++++..++..-|+-|+|. .|++++|.++..+ +++.+.+|.+-++|.-- .....
T Consensus 195 ~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~---~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~ 271 (491)
T KOG1383|consen 195 REVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGE---IEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEE 271 (491)
T ss_pred EeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccc---hhhHHHHHHHHHHHhCCceeecccCccccccccccCcc
Confidence 999999888999999999999999999999999999995 4689999999998 99999999999988642 11000
Q ss_pred ccCCCCCCCceEEEc-cCChhhccccceeeeEEeCh-hhH-HHH-------HHHhhccccCCchHH---HHHHHHHHhCC
Q 013883 296 IASLPGMYERTVTMN-SLGKTFSLTGWKIGWAIAPP-HLT-WGV-------RQAHSFLTFATSTPM---QWAATAALRAP 362 (434)
Q Consensus 296 ~~~~~~~~~~~i~i~-S~SK~~g~~G~R~G~~~~~~-~~~-~~l-------~~~~~~~~~~~~~~~---q~a~~~~L~~~ 362 (434)
-..+.. ..|-.+. +-.| ||+.--..||++-.. ++. .++ -......+.+.+.++ ...-++++.-+
T Consensus 272 ~fdFr~--p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG 348 (491)
T KOG1383|consen 272 EFDFRV--PGVTSISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLG 348 (491)
T ss_pred ccccCC--CCceeEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhh
Confidence 111110 1122222 2223 455444478887542 221 111 111111122222222 22223445545
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhC-CCEee-cCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEE
Q 013883 363 ETYYEELKRDYSAKKAILVEGLNAV-GFKVF-PSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 363 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v 427 (434)
++.+.+.-+++.+....+++.+++. +++++ +|.-.+..| +-. .. +-.++...|. +.|..+
T Consensus 349 ~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~-~s~--~~-~i~elsd~l~-~~GW~l 410 (491)
T KOG1383|consen 349 EEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILF-GSN--DV-NIFELSDLLR-KKGWIL 410 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEc-cCC--cc-chhhhhHHHH-hcCcCc
Confidence 5566667777888899999999986 56655 344443332 211 11 3446666554 446654
No 382
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.82 E-value=9.3e-07 Score=82.12 Aligned_cols=287 Identities=18% Similarity=0.173 Sum_probs=172.4
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc---C----CCC-CCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD---G----KNQ-YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~---~----~~~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
++|-|..+..+..++....+..+.+..+ . ++. -.+. .++-+.+...+....|. .+. +++++.+.+-
T Consensus 31 ~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W---~~lp~~lgdklApLiGA--~~~-Evvv~dtts~ 104 (407)
T COG3844 31 GVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADW---FDLPERLGDKLAPLIGA--RAG-EVVVTDTTSI 104 (407)
T ss_pred CeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCch---hhchhHHHHHhhhhhcC--CCC-ceEEeCCcch
Confidence 6788876655544444444333333322 1 111 1222 33444455555555554 344 8999999998
Q ss_pred HHHHHHHHcc--CCCCeEEEcCCCchh-----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCC
Q 013883 182 AIAATILGLI--NPGDEVILFAPFYDS-----YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNP 254 (434)
Q Consensus 182 ai~~~~~~l~--~~gd~Vlv~~p~y~~-----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NP 254 (434)
.++..+.+.+ ++|++|++++-.-++ ....++..|.. ++ -...+.++.+++++++++.+|++++.+.-
T Consensus 105 nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~-~~~~~~P~~~~~~~~dd~AvV~L~~V~y~ 178 (407)
T COG3844 105 NLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YD-LEGVIAPRALEEAITDDVAVVLLSHVNYK 178 (407)
T ss_pred HHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-----cc-ceeeeChHHHHHhhccceEEEEecccccc
Confidence 8888887775 458999997654332 23344444433 11 02344677999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc-cccceeeeEEeChhhH
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIAPPHLT 333 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~~~~~~ 333 (434)
||..+ ++.+|-+++++|+++++.|-+++...+.- .+. ..+-.+-|++--|.+. -||-..|..+.+ +..
T Consensus 179 TGql~---dm~aiT~~AH~~galv~wDLAHsaGavp~---~Lh----~~gaDfaigcsyKYLNgGPGapa~l~v~~-~h~ 247 (407)
T COG3844 179 TGQLL---DMRAITALAHQHGALVGWDLAHSAGAVPV---DLH----AAGADFAIGCSYKYLNGGPGAPAGLFVAP-RHR 247 (407)
T ss_pred cccee---eHHHHHHHHHhcCceEEeehhcccCCcce---eec----ccCCCeeeeeeceeccCCCCCceeEEecc-ccc
Confidence 99998 67889999999999999999998743321 111 1234567888888883 255444444433 222
Q ss_pred HHH-----------------------HHHhhccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhC--
Q 013883 334 WGV-----------------------RQAHSFLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAV-- 387 (434)
Q Consensus 334 ~~l-----------------------~~~~~~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-- 387 (434)
+.. ..+.++...+.+..+..++..+|+-. +-.+.++|++-....+++.+.++..
T Consensus 248 e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~ 327 (407)
T COG3844 248 ERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCE 327 (407)
T ss_pred cccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccc
Confidence 111 01122223344555555555555532 1125667777777778888877653
Q ss_pred --CCEeecC-----CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 388 --GFKVFPS-----SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 388 --g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
++.+..| .|+... +.++ ...++++.|.++ ||.
T Consensus 328 ~~~l~l~tPr~~~~rGsqvS-~~hp-----~~~~V~qaLi~r-GVi 366 (407)
T COG3844 328 YYGLTLVTPRAHEERGSQVS-LYHP-----HGYQVMQALIDR-GVI 366 (407)
T ss_pred cCCcEEeccchhhhccceee-EecC-----cHHHHHHHHHHc-Ccc
Confidence 6666654 234332 3232 477888888765 986
No 383
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.81 E-value=7.1e-07 Score=83.96 Aligned_cols=243 Identities=15% Similarity=0.107 Sum_probs=152.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHH-HHHHHcCCE---------EEEEEcCCCCCCCCHHHHHhhccc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE-ATLSMAGAK---------IKCITLRPPDFAIPIEELKSTISK 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~-~~~~~~G~~---------~~~v~~~~~~~~~d~~~l~~~i~~ 241 (434)
+|.--+| +-|..++..+++.|+|+|.-.+.-..+|. +....-+-+ -.++.+++.++-+|.|.||+....
T Consensus 109 NVQp~SG-SPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~ 187 (477)
T KOG2467|consen 109 NVQPYSG-SPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATL 187 (477)
T ss_pred eeccCCC-CchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHh
Confidence 3444455 66777789999999999885443333221 111111111 122334566788999999987655
Q ss_pred -CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCC-ccccCCCCccccCCCCCCCceEEEccCChhhccc
Q 013883 242 -NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYD-KLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~-~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
++|+|+--.-..+ ..+ +.+++.++|.+.|.+++.|.++. +++-.+.-++.... ..|+..+-.|.+ -
T Consensus 188 frPk~iiaG~SaY~--R~~---DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-----~DiVTTTTHKsL--R 255 (477)
T KOG2467|consen 188 FRPKLIIAGTSAYS--RLI---DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY-----CDIVTTTTHKSL--R 255 (477)
T ss_pred cCCcEEEeccccch--hhc---cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-----cceeeccccccc--c
Confidence 7888775322222 333 45667778889999999999985 33322222221111 237778889986 6
Q ss_pred cceeeeEEeCh-----------hhH----HHHHHHhhc-cccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHH
Q 013883 320 GWKIGWAIAPP-----------HLT----WGVRQAHSF-LTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVE 382 (434)
Q Consensus 320 G~R~G~~~~~~-----------~~~----~~l~~~~~~-~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~ 382 (434)
|.|.|.+.-.+ ++. +.++..-.. ...++......+++.+|+.. ...+++...+..++.+.|.+
T Consensus 256 GPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~ 335 (477)
T KOG2467|consen 256 GPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALAS 335 (477)
T ss_pred CCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999888543 111 222211111 12344444566666777753 23356667788889999999
Q ss_pred HhhhCCCEeecC-CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 383 GLNAVGFKVFPS-SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 383 ~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
.|.+.|++++.. ..+..+.+++.+.|. +-.-++++++..+|.+.-
T Consensus 336 ~l~~~Gy~lvtgGTDnHlvLvDLr~~G~--dGarvE~vle~~~I~~NK 381 (477)
T KOG2467|consen 336 ALISRGYKLVTGGTDNHLVLVDLRPKGV--DGARVEKVLELCHIALNK 381 (477)
T ss_pred HHHHcCceEecCCccceEEEEeccccCC--chHHHHHHHHHhhhhhcC
Confidence 999999998753 467788899988876 335677888877776543
No 384
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.65 E-value=1.4e-06 Score=86.17 Aligned_cols=224 Identities=19% Similarity=0.241 Sum_probs=129.5
Q ss_pred CCCCC-----CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc---cCCCCeEEEcCCCchhHHHHH
Q 013883 140 NQYAR-----GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL---INPGDEVILFAPFYDSYEATL 211 (434)
Q Consensus 140 ~~Y~~-----~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l---~~~gd~Vlv~~p~y~~~~~~~ 211 (434)
..|.| .+|..+..-.....+.+..|.++. +.-+-.|++.+-++++.+. .+.+++|+++.-.++.+...+
T Consensus 95 TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdva---NaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~ 171 (429)
T PF02347_consen 95 TAYTPYQPEISQGRLQALFEYQSMICELTGMDVA---NASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVL 171 (429)
T ss_dssp CS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE----SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHH
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCcc---CCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHH
Confidence 45666 346555555566666666676542 2345567676666555443 233469999999999988765
Q ss_pred HH----cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCcc
Q 013883 212 SM----AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKL 287 (434)
Q Consensus 212 ~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~ 287 (434)
+. .|.+++.++.++ +...| ++++.+|++.+|| -.|.+- ++++|.++++++|.++++ .+ ..+
T Consensus 172 ~t~a~~~g~~iv~~~~~~-~~~~d--------~~~~a~v~vq~Pn-~~G~~e---d~~~i~~~~h~~gal~~~-~a-d~~ 236 (429)
T PF02347_consen 172 RTYAAPLGIEIVEVPLDE-DGTTD--------DDDTAAVMVQNPN-TFGVFE---DIKEIADIAHAAGALVIV-GA-DPN 236 (429)
T ss_dssp HHHCCHCCEEEEEE-BBT-TCSB---------STTEEEEEEESS--TTSB-----THHHHHHHHHHTT-EEEE-CG-GCC
T ss_pred HHhhhhCCeEEEEecccc-cCCcc--------ccCeEEEEeecCC-CCceEe---eHHHHHHHHHHcCCEEEE-ec-CHH
Confidence 54 788999998875 33333 5688999999995 577764 488999999999999886 22 121
Q ss_pred ccCCCCccccCCCCCCCceEEEccCChhh----ccccceeeeEEeChhhHHHH---------------------------
Q 013883 288 AFEMDHISIASLPGMYERTVTMNSLGKTF----SLTGWKIGWAIAPPHLTWGV--------------------------- 336 (434)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~----g~~G~R~G~~~~~~~~~~~l--------------------------- 336 (434)
.. .+..-++..+-.|++++ +|.| |..|.-+|++.++++++.++
T Consensus 237 aL-----~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQH 310 (429)
T PF02347_consen 237 AL-----GGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQH 310 (429)
T ss_dssp GC-----CTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCH
T ss_pred HH-----hCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeecccccccc
Confidence 11 12222333344455654 5555 44577789999887765432
Q ss_pred -HHHhhccccCCchHH--HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 337 -RQAHSFLTFATSTPM--QWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 337 -~~~~~~~~~~~~~~~--q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
++-+...+.|.+... ..++..+...+.+.++++.++...+..++.+.|++.
T Consensus 311 IrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 311 IRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp HHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222222233333332 223333333456789999999999999999999986
No 385
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.39 E-value=0.00017 Score=77.75 Aligned_cols=282 Identities=15% Similarity=0.170 Sum_probs=160.0
Q ss_pred EeCCCCCCCCCcHHHHHHHHHHHHcC--CCCCCCCC-----CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 113 NLGQGFPNFDGPDFVKDAAIQAIRDG--KNQYARGH-----GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 113 ~l~~g~p~~~~~~~v~~~~~~~~~~~--~~~Y~~~~-----G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
-+|.|+=+.-.|+.+.+.+ +.++ ...|.|.+ |..+..=..+..+....|.++.. --+--|++.+-++
T Consensus 83 fiG~G~y~~~~P~vi~~~i---~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaN---ASl~D~atA~aEA 156 (954)
T PRK12566 83 LIGMGYHGTVTPTVILRNV---LENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLAN---ASLLDEATAAAEA 156 (954)
T ss_pred cccccccCCcCcHHHHHHH---HhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhh---hhhccchhHHHHH
Confidence 3566754444556554333 3332 24566644 44343334444455555665542 2233344444443
Q ss_pred HHHHc---cCCCCeEEEcCCCchhHHHHHH----HcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccC
Q 013883 186 TILGL---INPGDEVILFAPFYDSYEATLS----MAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258 (434)
Q Consensus 186 ~~~~l---~~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~ 258 (434)
++.+. -.+..+|+|++-.++.+..+++ ..|++++. +++++.+..++.++++.+|+ -.|.+
T Consensus 157 ~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------------~~~~~~~~~~~~~v~vq~P~-~~G~i 223 (954)
T PRK12566 157 MALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------------DAVDNLAAHAVFGALLQYPD-THGEI 223 (954)
T ss_pred HHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------------cchhhcCCCCEEEEEEECCC-CceEE
Confidence 33332 2224689999999998877654 46666663 23444555577888888884 57877
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEc---cCChhhccccceeeeEEeChhhHHH
Q 013883 259 FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMN---SLGKTFSLTGWKIGWAIAPPHLTWG 335 (434)
Q Consensus 259 ~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~---S~SK~~g~~G~R~G~~~~~~~~~~~ 335 (434)
+++++|.++++++|.++|+ .+ ..+ ...+..-++..+-.|.++ +|.=-+|..|.-.||+.+.+++..+
T Consensus 224 ---~d~~~i~~~~h~~gal~~~-~~-d~l-----aL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~ 293 (954)
T PRK12566 224 ---RDLRPLIDQLHGQQALACV-AA-DLL-----SLLVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRA 293 (954)
T ss_pred ---ccHHHHHHHHHHcCCEEEE-Ee-CHH-----HHhCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhh
Confidence 4688899999999998774 11 111 112222344444455554 5676677778889999987766542
Q ss_pred H----------------------------HHHhhccccCCchHHHHHH--HHHHhCChHHHHHHHHHHHHHHHHHHHHhh
Q 013883 336 V----------------------------RQAHSFLTFATSTPMQWAA--TAALRAPETYYEELKRDYSAKKAILVEGLN 385 (434)
Q Consensus 336 l----------------------------~~~~~~~~~~~~~~~q~a~--~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~ 385 (434)
+ ++-+...+.|.+....+.+ ..+.-.+.+.++++.++...+..++.+.|.
T Consensus 294 ~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~ 373 (954)
T PRK12566 294 MPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLE 373 (954)
T ss_pred CCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2222222233332222222 222233566788888888999999999999
Q ss_pred hCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 386 AVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
+.|+++... .||--+.+. .+. ...++.++.++ .||-++
T Consensus 374 ~~g~~~~~~--~fF~~~~v~-~~~-~~~~~~~~a~~-~~~n~r 411 (954)
T PRK12566 374 AKGIKRLNR--HFFDTLTLE-VGG-AQAAIIESAEA-ARINLR 411 (954)
T ss_pred hcCCccccC--CccceEEEE-ccC-CHHHHHHHHHH-CCCeeE
Confidence 999887533 444322221 121 35566665544 476554
No 386
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.31 E-value=5.5e-05 Score=73.29 Aligned_cols=182 Identities=14% Similarity=0.117 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH-HHHHHHHHcc--CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC--
Q 013883 150 EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE-AIAATILGLI--NPGDEVILFAPFYDSYEATLSMAGAKIKCITLR-- 224 (434)
Q Consensus 150 ~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~-ai~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-- 224 (434)
.|...++..+-+..|..- .+ ..++.+.+|. .+.+.+.++. ..++.|+.+.-.+......+..+|++++.||..
T Consensus 56 ~ltn~l~~d~~~~~G~~~-~~-~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~ 133 (389)
T PF05889_consen 56 KLTNSLVLDALRLAGLRS-VK-SCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLE 133 (389)
T ss_dssp HHHHHHHHHHHHHTTHTT-HC-EEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEE
T ss_pred HHHHHHHHHHHHHcCCcc-cc-ceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCC
Confidence 344444444545566532 22 4566655553 5566666664 456899999988888888889999999999853
Q ss_pred CCCCCCCHHHHHhhccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCC--
Q 013883 225 PPDFAIPIEELKSTISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASL-- 299 (434)
Q Consensus 225 ~~~~~~d~~~l~~~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~-- 299 (434)
++....|++.+++.+++ +..+.+++++..-.|... +++++|+++|++||+..|+-.||.-=.. .-...+
T Consensus 134 ~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~----~~~~~i~~ 207 (389)
T PF05889_consen 134 GDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSS----KCMHLIQQ 207 (389)
T ss_dssp TTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-H----HHHHHHHH
T ss_pred CCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhHH----HHHHHHHH
Confidence 22334567888887754 445667777765556554 3599999999999999999999975110 000000
Q ss_pred -CCCCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHh
Q 013883 300 -PGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAH 340 (434)
Q Consensus 300 -~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~ 340 (434)
...+.-.+.++|.-|+|= -+..-+.+.++ +..+..+.+..
T Consensus 208 a~~~GRvda~vqS~dkNF~-VPvGgai~As~~~~~i~~vs~~Y 249 (389)
T PF05889_consen 208 AWRVGRVDAFVQSTDKNFM-VPVGGAIMASFDPSGILAVSKEY 249 (389)
T ss_dssp HHHHSTCSEEEEEHHHHHC-EESSHEEEEESSHHHHHHHHHTS
T ss_pred HHhcCCcceeeeecCCCEE-ecCCCcEEEecCHHHHHHHHHHh
Confidence 000122378999999993 44433444444 55666665543
No 387
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.01 E-value=0.00047 Score=65.76 Aligned_cols=295 Identities=14% Similarity=0.124 Sum_probs=161.2
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCCCCCC------CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYAR------GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~~Y~~------~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
...||+.| |.-. |+.+++.+++.+.+ ...+++- ..-..++.+...+.+.+.++++-+.+ -+++-.|++..
T Consensus 5 ~~~nFsaG-Pa~l-p~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~-VlflqGGat~q 81 (365)
T COG1932 5 RVYNFSAG-PAAL-PPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYK-VLFLQGGATGQ 81 (365)
T ss_pred CCCCCCCC-cccC-CHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCce-EEEEcCccHHH
Confidence 45688877 3322 44444444444333 1111111 11124555666667777778765554 45556778888
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHH-HHHHHcCC--EEEEEEcCCCC--CCCCHHHHHhhcccCCcEEEecCCCCCccc
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYE-ATLSMAGA--KIKCITLRPPD--FAIPIEELKSTISKNTRAILMNTPHNPTGK 257 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~-~~~~~~G~--~~~~v~~~~~~--~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~ 257 (434)
+..+...++..+..-++..-.|.... .-++..+- ++........+ .-++++.+. +.++..-|.++.-..-+|+
T Consensus 82 f~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv 159 (365)
T COG1932 82 FAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGV 159 (365)
T ss_pred HHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccce
Confidence 99888888876543255566666542 22344443 22222222222 234555443 3334333444433334577
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHH
Q 013883 258 MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVR 337 (434)
Q Consensus 258 ~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~ 337 (434)
-++. ...+. .+.++|.|..-.-|.. ...+..+ .++..+.=|++|..| ++.++.+++++.+++
T Consensus 160 ~v~~--~p~~~-----~~~~~v~D~SS~ilsr---~iDvsk~------dviyagaQKnlGpaG--ltvvIvr~~~l~r~~ 221 (365)
T COG1932 160 EVPE--LPDIG-----SDGLLVADASSAILSR---PIDVSKY------DVIYAGAQKNLGPAG--LTVVIVRPDLLERAE 221 (365)
T ss_pred EccC--CCCCC-----CCceEEEecccHHhcC---CCChhHc------ceEEEehhhccCccc--eEEEEEcHHHHhccc
Confidence 5542 11111 1278888886655431 2222222 256678889999888 999999999988775
Q ss_pred HH-------------hhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEe--e--cCCeeE
Q 013883 338 QA-------------HSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKV--F--PSSGTY 398 (434)
Q Consensus 338 ~~-------------~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~--~~~~~~ 398 (434)
.. ...+..+++.+.-+....+++-. ...++.+.++-+++.+.|++.+.+.+|-- + .....|
T Consensus 222 ~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~m 301 (365)
T COG1932 222 SYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRM 301 (365)
T ss_pred ccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccce
Confidence 43 11223344555555554444421 23467778888889999999998875421 1 233556
Q ss_pred EEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 399 FVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
-+.+++.... -+..|+..+ +++|+...-|
T Consensus 302 nV~f~~~~~~--ld~~fv~ea-e~~gl~~lkG 330 (365)
T COG1932 302 NVTFTLVDAE--LDKGFVAEA-EAAGLIYLKG 330 (365)
T ss_pred eEEEEcCcHH--HHHHHHHHH-HHcCCceecc
Confidence 6666654322 245666665 4557776555
No 388
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.86 E-value=0.00024 Score=68.60 Aligned_cols=244 Identities=11% Similarity=0.094 Sum_probs=137.7
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccC--C-----C-----CeEEE-cCCCchh
Q 013883 140 NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLIN--P-----G-----DEVIL-FAPFYDS 206 (434)
Q Consensus 140 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~--~-----g-----d~Vlv-~~p~y~~ 206 (434)
..|--..+..-..+.+-..+...-|.+...+ .|+.-.|+...+..+..+-.+ | | +-|+. .+-+|.+
T Consensus 131 ~TYEiAPvF~lmE~~vl~km~~ivGw~~~~D-gIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYS 209 (510)
T KOG0629|consen 131 FTYEIAPVFVLMEEEVLAKMREIVGWEEGGD-GIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYS 209 (510)
T ss_pred ceEEecceEEeehHHHHHHHHHHhCCCCCCC-ceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhh
Confidence 3443333433344445555555667665534 676666666666655443311 1 2 33444 4567888
Q ss_pred HHHHHHHcC---CEEEEEEcCCCCCCCCHHHHHhhccc-CCc-EE-EecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 207 YEATLSMAG---AKIKCITLRPPDFAIPIEELKSTISK-NTR-AI-LMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 207 ~~~~~~~~G---~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~-~i-~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
....+..+| -.++.|+.++ .+.+++++||+.|-. +.+ .+ ++.|.+--|-+.=--+++..|+++|++|++|+.+
T Consensus 210 i~kaAa~lg~gtd~c~~v~t~e-~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHv 288 (510)
T KOG0629|consen 210 IKKAAAFLGLGTDHCIKVKTDE-RGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHV 288 (510)
T ss_pred HHHHHHHhccCCceeEEecccc-cCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEe
Confidence 888888888 4678888875 788999999998854 112 11 2223323332222234688899999999999999
Q ss_pred cCcCCccc-cCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh-hHHHHHHHhhccccC-----------C
Q 013883 281 DEVYDKLA-FEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH-LTWGVRQAHSFLTFA-----------T 347 (434)
Q Consensus 281 Deay~~~~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~-~~~~l~~~~~~~~~~-----------~ 347 (434)
|.||.+.. ..-.+........ .---+..+..|.+| +.+.++.++...+ ++.++.......-|. .
T Consensus 289 DAAwGGglLmS~k~R~kl~Gie--ra~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTg 365 (510)
T KOG0629|consen 289 DAAWGGGLLMSRKHRHKLTGIE--RANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTG 365 (510)
T ss_pred ecccccccccChhhHhhccCcc--ccCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccc
Confidence 99998732 2222222111111 11134567789998 6677776665432 344333222111000 0
Q ss_pred chHHHHH-------HHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCC
Q 013883 348 STPMQWA-------ATAALRA-PETYYEELKRDYSAKKAILVEGLNAVG 388 (434)
Q Consensus 348 ~~~~q~a-------~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g 388 (434)
.-..|-. .-..++. +...+++.++++.+..+++.+.|++.+
T Consensus 366 dK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~ 414 (510)
T KOG0629|consen 366 DKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLRERE 414 (510)
T ss_pred cchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0011111 1222332 234567778899999999999999874
No 389
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.74 E-value=0.00068 Score=64.05 Aligned_cols=181 Identities=15% Similarity=0.170 Sum_probs=99.5
Q ss_pred CHHHHHhhccc-----CCcEEEecCC-CCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCC--CC
Q 013883 231 PIEELKSTISK-----NTRAILMNTP-HNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASL--PG 301 (434)
Q Consensus 231 d~~~l~~~i~~-----~~~~i~~~~p-~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~--~~ 301 (434)
.++++|+.|.. .+.+-++..| +...|- -.+++..++|.+++++|++.+|+||++.+..-.|+.+.-... ..
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 36677777743 2444445555 666665 458888999999999999999999999987766655433222 22
Q ss_pred CCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 302 MYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 302 ~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
.+| +-+|||-|- .| ||++..+-... +.++.+.++...+.-...+..+++... -+.+.+..++.-+.|.
T Consensus 334 PpD----~vTFSKK~q-~g---Gffh~~~frpn--~pYrifNTWmGdP~k~lll~~vv~~I~--~~~Ll~n~~~vG~~l~ 401 (484)
T KOG1405|consen 334 PPD----VVTFSKKFQ-TG---GFFHDEEFRPN--EPYRIFNTWMGDPSKNLLLEEVVQEIK--REDLLNNVAHVGKALL 401 (484)
T ss_pred Ccc----ceehhhhhh-cC---ccccCcccCCC--chHHHhhhhcCChHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHH
Confidence 222 668999995 55 67665322111 112233344444443434444444311 1234444455555666
Q ss_pred HHhhhC----C--CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEE
Q 013883 382 EGLNAV----G--FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 382 ~~L~~~----g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v 427 (434)
..|.++ + +.-....|.|. ..+++. +. --..++..+ +-.||.+
T Consensus 402 ~gL~~Lq~~~p~~~~~~RGrGTF~-a~d~ps-~~-~Rdk~i~~~-~~nGv~~ 449 (484)
T KOG1405|consen 402 KGLLELQAKYPGKINNLRGRGTFI-AWDCPS-GS-IRDKLILIA-RLNGVNL 449 (484)
T ss_pred HHHHHHHHhCchhhhcccccceEE-EEeCCC-hH-HHHHHHHHH-HHcCcee
Confidence 665543 2 33344566654 445532 11 122444444 3447654
No 390
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.55 E-value=0.0012 Score=64.54 Aligned_cols=147 Identities=18% Similarity=0.273 Sum_probs=99.6
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhcCCCC-------CCCCcEEEcCChHHHHHHHHHHc-------cCCCC----------
Q 013883 140 NQYARGHGVPEFNSAIASRFKKDSGLEV-------DPEKEVTVTSGCTEAIAATILGL-------INPGD---------- 195 (434)
Q Consensus 140 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~-------~~~~~i~~t~G~~~ai~~~~~~l-------~~~gd---------- 195 (434)
+.+....-..||..-+-+|+.+..+++. ....-++-++. +++...++.+. .+.++
T Consensus 103 FtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~ta-ses~lvallaaR~~~i~~~k~~~p~~~e~~~~~ 181 (511)
T KOG0628|consen 103 FTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTA-SESVLVALLAARTEKIEEIKSRPPELHESSVLA 181 (511)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCc-chhHHHHHHHHHHHHHHHhhcCCCcccchhhhh
Confidence 3444444678999999999998876531 12213444444 44443333222 12221
Q ss_pred --eEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCC-c---EEEecCCCCCcccCCCHHHHHHHHH
Q 013883 196 --EVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNT-R---AILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 196 --~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~-~---~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
.++..+-.+.+....+...|.+++.++.+. +++++-+.|+++|.++. + -++++ .+--|...-.-+++.+|..
T Consensus 182 ~lV~Y~SDqahssveka~~i~~VklR~l~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~-at~GTT~~ca~D~l~elg~ 259 (511)
T KOG0628|consen 182 RLVAYCSDQAHSSVEKACLIAGVKLRALPTDE-NFGMRGDTLRKAIEEDIARGLIPFFVC-ATLGTTSSCAFDELEELGP 259 (511)
T ss_pred hheEEecCcccchHHHhHhhcceeEEEeeccc-CcCCCHHHHHHHHHHHHhCCCccEEEE-EeecCccccccccHHHhcc
Confidence 366788899999999999999999999987 99999999999997622 1 12222 2223333345568999999
Q ss_pred HHHHcCcEEEEcCcCCcccc
Q 013883 270 LCIENDVLVFSDEVYDKLAF 289 (434)
Q Consensus 270 la~~~~~~iI~Deay~~~~~ 289 (434)
+|+++++|+.+|.+|++-.+
T Consensus 260 Vc~~~glWLHVDAAYAGsa~ 279 (511)
T KOG0628|consen 260 VCREEGLWLHVDAAYAGSAF 279 (511)
T ss_pred hhhhcCEEEEeehhhccccc
Confidence 99999999999999997554
No 391
>PLN02672 methionine S-methyltransferase
Probab=96.95 E-value=0.036 Score=61.41 Aligned_cols=213 Identities=14% Similarity=0.113 Sum_probs=133.9
Q ss_pred HHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc------cCCCCeEEEcC
Q 013883 129 DAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL------INPGDEVILFA 201 (434)
Q Consensus 129 ~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l------~~~gd~Vlv~~ 201 (434)
..+...+++. ...|.++.|...+|..||.+++..++++++++ +|++..+-..|++.+++.+ ++.+.+-.++
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 485 (1082)
T PLN02672 408 AYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPD-NVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP- 485 (1082)
T ss_pred HHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCcc-ceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC-
Confidence 3455556553 46799999999999999999999999999999 8999999999998887755 3444333222
Q ss_pred CCchhHHHHHHHcCC-------EEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHH
Q 013883 202 PFYDSYEATLSMAGA-------KIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIE 273 (434)
Q Consensus 202 p~y~~~~~~~~~~G~-------~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~ 273 (434)
..+...+...|. ..++|--.+ .+ -+.+.+++++ ++++|+..-.+ +-..+....+.|.+.+++
T Consensus 486 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 555 (1082)
T PLN02672 486 ---KKWLTSLAIENATSDSKSDDVITVIEAP--RQ--SDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTAE 555 (1082)
T ss_pred ---HHHHhHhhhhcccccCccCCeEEEEeCC--Cc--chHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHHh
Confidence 122222223221 112221111 11 2345666655 67777654433 223455678899999999
Q ss_pred cCcEEEEcCc-CCccccCCCCcccc-CC--CCCCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhhccccCCc
Q 013883 274 NDVLVFSDEV-YDKLAFEMDHISIA-SL--PGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 274 ~~~~iI~Dea-y~~~~~~~~~~~~~-~~--~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~~~~~ 348 (434)
.|.+++.|.. |.++........+. .+ ...+.+..++..+-|+-=.+.+-+.+++.- ..+...+.+.......+..
T Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (1082)
T PLN02672 556 IGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKTGEVLEGRTA 635 (1082)
T ss_pred hCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHHHHhhccchH
Confidence 9999999986 44443222221211 11 123456677888888887789999998875 4455556555544444555
Q ss_pred hHHHH
Q 013883 349 TPMQW 353 (434)
Q Consensus 349 ~~~q~ 353 (434)
.+.|+
T Consensus 636 ~~~~~ 640 (1082)
T PLN02672 636 IISQF 640 (1082)
T ss_pred HHHHH
Confidence 55544
No 392
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.50 E-value=0.02 Score=52.27 Aligned_cols=192 Identities=19% Similarity=0.170 Sum_probs=99.9
Q ss_pred hcCCCCCCCCcEEEcCChHHHHHHHHHHcc--CCC-CeEEEcCCCchhHHHHHHHcCCEEEEEEc-CC-CCCCCCHHHHH
Q 013883 162 DSGLEVDPEKEVTVTSGCTEAIAATILGLI--NPG-DEVILFAPFYDSYEATLSMAGAKIKCITL-RP-PDFAIPIEELK 236 (434)
Q Consensus 162 ~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~--~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~-~~-~~~~~d~~~l~ 236 (434)
..|++.-.. .+++--.....+.+.+..+. +|. ..|+-+.-.-......+-.+|.+++.+.- .+ +.-.-|++.++
T Consensus 69 l~glhav~n-c~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~ 147 (432)
T KOG3843|consen 69 LAGLHAVAN-CFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVE 147 (432)
T ss_pred Hhhhhhhhc-eeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHH
Confidence 345544343 45543333334555555553 343 33444444444444445567887766643 22 22345788888
Q ss_pred hhccc-CCcEEEecCCCCCccc--CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCC
Q 013883 237 STISK-NTRAILMNTPHNPTGK--MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLG 313 (434)
Q Consensus 237 ~~i~~-~~~~i~~~~p~NPTG~--~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~S 313 (434)
+.+.+ +...|+-. |..|.. .-+++.+++|+.+|..|+++-|+..+|..-..+ --..+..-...+.-..+++|+-
T Consensus 148 ~~iee~g~dcilci--~sttscfapr~pd~leaiaaica~~diphivnnayglqsee-~i~~iaa~~~~grida~vqsld 224 (432)
T KOG3843|consen 148 AIIEELGEDCILCI--HSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEE-CIHKIAAAAECGRIDAFVQSLD 224 (432)
T ss_pred HHHHHhCCceEEEE--eecccccCCCCCchHHHHHHHHHccCchhhhccccccchHH-HHHHHHHHhhhccHHHHHHHhh
Confidence 88766 44433321 222211 224568999999999999999999999752211 0001111111122335688999
Q ss_pred hhhccccceee-eEEe--ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC
Q 013883 314 KTFSLTGWKIG-WAIA--PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP 362 (434)
Q Consensus 314 K~~g~~G~R~G-~~~~--~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~ 362 (434)
|+|-.| +| .+++ +..++..+.+.... -....++...+...|..+
T Consensus 225 knf~vp---vggaiia~fk~n~iq~iak~ypg--rasa~ps~dllitll~~g 271 (432)
T KOG3843|consen 225 KNFMVP---VGGAIIAAFKDNFIQEIAKMYPG--RASASPSLDLLITLLSLG 271 (432)
T ss_pred hcceee---cchhHhhHhHHHHHHHHHHhCCC--ccccCccHHHHHHHHHhc
Confidence 999644 34 3332 34556555554332 223344444444445443
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.08 E-value=0.28 Score=50.50 Aligned_cols=269 Identities=17% Similarity=0.242 Sum_probs=148.6
Q ss_pred CCCCCC---CCcHHHHHHHHHHHHhhcCCCCCCCCcEEE--cCChHH--HHHHHHHHcc-CCC---C-eEEEcCCCchhH
Q 013883 140 NQYARG---HGVPEFNSAIASRFKKDSGLEVDPEKEVTV--TSGCTE--AIAATILGLI-NPG---D-EVILFAPFYDSY 207 (434)
Q Consensus 140 ~~Y~~~---~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~--t~G~~~--ai~~~~~~l~-~~g---d-~Vlv~~p~y~~~ 207 (434)
+.|.|. +|+.++-..+.++|-...|.+ .+.+ .+|++. +...++++.. ..| + .-++|-..+...
T Consensus 569 HPF~P~eQaqGY~~lf~~Le~~Lc~iTG~D-----~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTN 643 (1001)
T KOG2040|consen 569 HPFAPVEQAQGYQQLFTELEKDLCEITGFD-----SFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTN 643 (1001)
T ss_pred CCCCchHHHhhHHHHHHHHHHHhheeeccc-----ceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCC
Confidence 445553 477788888888877665542 3433 344332 2333455543 233 2 355677777777
Q ss_pred HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcC
Q 013883 208 EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284 (434)
Q Consensus 208 ~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay 284 (434)
...+.++|.+++.|..+. ++.+|+.+|++...+ +-.++.+..|.. .|+ =.+.++.++++.++||-.+..|.+-
T Consensus 644 PASA~MagmkvvpV~~~~-~G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gv--fE~~i~d~cd~iHehGGQVYlDGAN 719 (1001)
T KOG2040|consen 644 PASAAMAGMKVVPVGCDA-NGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGV--FEEGIDDICDIIHEHGGQVYLDGAN 719 (1001)
T ss_pred hhhHHhcCCEEEEeeccC-CCCccHHHHHHHHHHhhhhhheeEEecccc-ccc--ccccHHHHHHHHHhcCCEEEecCCC
Confidence 777889999999999985 788999999987765 446777776632 243 2457999999999999999999875
Q ss_pred CccccCCCCccccCCCCCCCceEEEccCChhhcc----ccceeeeEEeChhhHHHHHH-----------Hhhc-----cc
Q 013883 285 DKLAFEMDHISIASLPGMYERTVTMNSLGKTFSL----TGWKIGWAIAPPHLTWGVRQ-----------AHSF-----LT 344 (434)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~----~G~R~G~~~~~~~~~~~l~~-----------~~~~-----~~ 344 (434)
-.-..+ +- -+++.+..+.=--+.|+|.+ .|..+|=+.+++.+...+-. .... .+
T Consensus 720 MNAqVG-----lc-~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP 793 (1001)
T KOG2040|consen 720 MNAQVG-----LC-RPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAP 793 (1001)
T ss_pred ccceec-----cc-CCccccccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccC
Confidence 331111 11 11222222333345666633 34445655555444332210 0000 01
Q ss_pred cCCch--HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEE---EeeecCCCC---CCCHHHHH
Q 013883 345 FATST--PMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYF---VVVDHTPFG---HETDIAFC 416 (434)
Q Consensus 345 ~~~~~--~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~ 416 (434)
|+... +..++-..++... .++.......-+.+++.+.|+..---++...-++. +.+++.++. .-+..+++
T Consensus 794 ~Gsa~ILpISwaYikmMG~~--GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvA 871 (1001)
T KOG2040|consen 794 WGSALILPISWAYIKMMGSG--GLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVA 871 (1001)
T ss_pred CCcceeehhHHHHHHHhccc--ccchhhHHHhhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhccccCCcHHHHH
Confidence 22111 1233333334331 23444444455677888888764211222222221 245555442 12578899
Q ss_pred HHHHHhcCeE
Q 013883 417 EYLIKEVGVV 426 (434)
Q Consensus 417 ~~Ll~~~GV~ 426 (434)
++|. ++|..
T Consensus 872 KRL~-DYgFH 880 (1001)
T KOG2040|consen 872 KRLM-DYGFH 880 (1001)
T ss_pred HHHH-hccCC
Confidence 9985 46753
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=95.45 E-value=1.3 Score=45.87 Aligned_cols=279 Identities=19% Similarity=0.249 Sum_probs=139.6
Q ss_pred eCCCCCCCCCcHHHHHHHHHHHHcC-C-CCCCCCC-----CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 114 LGQGFPNFDGPDFVKDAAIQAIRDG-K-NQYARGH-----GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 114 l~~g~p~~~~~~~v~~~~~~~~~~~-~-~~Y~~~~-----G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
.+.||-+.-.|+.+.+ ..+++. + .+|.|.+ |-.|-.-.....+....|+++... -++--|...+-..+
T Consensus 123 IGmGYyn~~vP~~I~R---Nilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNA--SLLDEgTAaaEAm~ 197 (1001)
T KOG2040|consen 123 IGMGYYNTHVPAVILR---NILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANA--SLLDEGTAAAEAMA 197 (1001)
T ss_pred hccccccccCcHHHHH---HhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccch--hhhccchhHHHHHH
Confidence 3556555555555543 234442 2 5687765 221111112222333456665432 34444433333333
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSM----AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTRE 262 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e 262 (434)
+..-.+++.+.++...+|+....+++. +|++++..+ ++... ...++...+++..|.. -|.+.
T Consensus 198 l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~---------~~~~~-~s~~~v~gvlvQYP~t-~G~i~--- 263 (1001)
T KOG2040|consen 198 LCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD---------IKEAD-YSSKDVSGVLVQYPDT-EGSVL--- 263 (1001)
T ss_pred HHHhhcccceEEecCCCCcchhhhhhccccccceeEEecC---------HHHhh-ccccceeEEEEEcCCC-CCccc---
Confidence 333345666799999999988777543 444443322 22111 1223566777777743 56666
Q ss_pred HHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEcc---CChhhccccceeeeEEeChhhHH-----
Q 013883 263 ELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNS---LGKTFSLTGWKIGWAIAPPHLTW----- 334 (434)
Q Consensus 263 ~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S---~SK~~g~~G~R~G~~~~~~~~~~----- 334 (434)
++.++++.+++.+.+++.-. ..+ ...+..-++..+..|.++| |.--+|..|.-.||+.+..++..
T Consensus 264 d~~el~~~a~~~~s~vv~at--DLL-----aLtiLrpPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGR 336 (1001)
T KOG2040|consen 264 DFDELVELAHANGSLVVMAT--DLL-----ALTILRPPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGR 336 (1001)
T ss_pred CHHHHHHHhhccCceEEEee--hhh-----HHHccCChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCc
Confidence 45668888888888877521 111 1122333444555677766 44444544555555554333221
Q ss_pred ----------------HHH----HHhh-ccccCCchHH----HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 013883 335 ----------------GVR----QAHS-FLTFATSTPM----QWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGF 389 (434)
Q Consensus 335 ----------------~l~----~~~~-~~~~~~~~~~----q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 389 (434)
++. .+++ ..+.+..... -.++..++-++.+.++++.+++....-.|...|++.|.
T Consensus 337 iiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~agh 416 (1001)
T KOG2040|consen 337 IIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGH 416 (1001)
T ss_pred eEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 110 1111 1123332221 11122223334556888888888888899999998885
Q ss_pred EeecCCeeEEEeeecCCCCCCCHHHHHHHHHHh
Q 013883 390 KVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKE 422 (434)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 422 (434)
++... .||=.+++. .+. +.+++..+.+++
T Consensus 417 el~~k--~fFDTLkI~-~~~-s~~~~l~rA~~~ 445 (1001)
T KOG2040|consen 417 ELQHK--PFFDTLKIR-CGC-SAEEVLDRAAKR 445 (1001)
T ss_pred hhccc--cccceEEEE-ecC-cHHHHHHHHHhh
Confidence 55433 255433332 121 356666666554
No 395
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=94.99 E-value=1.1 Score=41.87 Aligned_cols=251 Identities=14% Similarity=0.082 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc--CCC---CeEEEcCCCchhHHHHHHHcCCEEEEEEcC
Q 013883 150 EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI--NPG---DEVILFAPFYDSYEATLSMAGAKIKCITLR 224 (434)
Q Consensus 150 ~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~--~~g---d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~ 224 (434)
.+.+.....+.+.+.++-.-+ -+++..|++.-+.++...++ +.| |-|+.-..+-..+..+-+......+..+..
T Consensus 52 kii~~tes~lreLlniPdn~~-vlf~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k 130 (370)
T KOG2790|consen 52 KIINDTESLLRELLNIPDNYK-VLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLK 130 (370)
T ss_pred HHHHHHHHHHHHHHcCCCcee-EEEEeCCCcccccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEecccc
Confidence 444445555555556543333 45667777877777766665 444 455554444444555544444445544444
Q ss_pred CCC--CCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC
Q 013883 225 PPD--FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM 302 (434)
Q Consensus 225 ~~~--~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~ 302 (434)
+-. .-+|.+.++. +++.+.+++|.-...-|+-++. +- +-.-++.++|.|..-..+. .+..+.
T Consensus 131 ~y~ygkvPd~~~w~~--~~da~yvyyCaNETVHGVEf~~-----~P-~~~~~~~vlVaDmSSnflS---rpvDvs----- 194 (370)
T KOG2790|consen 131 SYTYGKVPDPSTWEL--NPDASYVYYCANETVHGVEFDF-----IP-VNDPKGAVLVADMSSNFLS---RPVDVS----- 194 (370)
T ss_pred ccccCcCCChhhccc--CCCccEEEEecCceeeceecCC-----CC-CCCCCCceEEEecccchhc---CCccch-----
Confidence 323 3356666653 3455566665433334664421 11 1134688889988665543 122222
Q ss_pred CCceEEEccCChhhccccceeeeEEeChhhHHHHHHH------------hhccccCCchHHHHHHHHHHhCC--hHHHHH
Q 013883 303 YERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA------------HSFLTFATSTPMQWAATAALRAP--ETYYEE 368 (434)
Q Consensus 303 ~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~------------~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~ 368 (434)
..-+++...-|++|.+| +-.++..++++.....+ ......++|....+++-.+++.. ...+..
T Consensus 195 -k~gvi~aGAQKN~G~aG--~Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a 271 (370)
T KOG2790|consen 195 -KFGVIFAGAQKNVGPAG--VTVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAA 271 (370)
T ss_pred -hcceEEeccccccCccc--cEEEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHH
Confidence 22356777889999888 55566666665422111 11122344555555554444431 223556
Q ss_pred HHHHHHHHHHHHHHHhhhC-CCEeecC----CeeEEEeeecCCCCCCCHHHHHHHHHHh
Q 013883 369 LKRDYSAKKAILVEGLNAV-GFKVFPS----SGTYFVVVDHTPFGHETDIAFCEYLIKE 422 (434)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 422 (434)
+...-.+..+.+++.+.+. |+-..+- ..-|-+.+++.+.. -..+|.....++
T Consensus 272 ~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~--Le~eFLkeA~~~ 328 (370)
T KOG2790|consen 272 MEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKDE--LEAEFLKEAAKE 328 (370)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecchH--HHHHHHHHHHHh
Confidence 6667777889999999875 6543321 23444444443221 234555554444
No 396
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=92.24 E-value=1.8 Score=40.79 Aligned_cols=114 Identities=19% Similarity=0.215 Sum_probs=82.2
Q ss_pred CCCcEEEcCChHHHHHHHHHHccCCC---CeEEEcCCCchh----HHHHHHHcCCEEE----EEEcCCCCCCCCHHHHHh
Q 013883 169 PEKEVTVTSGCTEAIAATILGLINPG---DEVILFAPFYDS----YEATLSMAGAKIK----CITLRPPDFAIPIEELKS 237 (434)
Q Consensus 169 ~~~~i~~t~G~~~ai~~~~~~l~~~g---d~Vlv~~p~y~~----~~~~~~~~G~~~~----~v~~~~~~~~~d~~~l~~ 237 (434)
.+ +|.+.|+-+..+..++..|.+|- -+|+++.-.|++ ....++..|..+. .+...+.+..+..+++.+
T Consensus 128 e~-EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd 206 (465)
T KOG3846|consen 128 EN-EVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILD 206 (465)
T ss_pred ch-hhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHH
Confidence 44 89999999999999999998764 358887766654 4556777787643 233333234567778888
Q ss_pred hccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCc
Q 013883 238 TISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDK 286 (434)
Q Consensus 238 ~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~ 286 (434)
.|.. ...+|+++..+.-||..+ ++.+|-..-+..|+++=+|-++..
T Consensus 207 ~IEkngDeiA~v~fSGvqyYTGQ~F---di~aIT~Agq~kgc~VGfDLAHAv 255 (465)
T KOG3846|consen 207 TIEKNGDEIALVCFSGVQYYTGQYF---DIGAITFAGQFKGCLVGFDLAHAV 255 (465)
T ss_pred HHHhcCCeEEEEEeecceeeccccc---chhhhhhcccCCCcEechhhhhhh
Confidence 7765 345566778899999999 566677655667999999998875
No 397
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=87.43 E-value=4.7 Score=36.76 Aligned_cols=97 Identities=16% Similarity=0.123 Sum_probs=57.7
Q ss_pred EEcCChHHHHHHHHHHccCCCCe-EEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCC
Q 013883 174 TVTSGCTEAIAATILGLINPGDE-VILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPH 252 (434)
Q Consensus 174 ~~t~G~~~ai~~~~~~l~~~gd~-Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~ 252 (434)
+++.++-..-..++.+|+..+-. .++..+.-......++..|++++...++ |.+.|.++++ +...|+++.+.
T Consensus 2 ~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~------~~~~l~~al~-g~d~v~~~~~~ 74 (233)
T PF05368_consen 2 LVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD------DPESLVAALK-GVDAVFSVTPP 74 (233)
T ss_dssp EEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-------HHHHHHHHT-TCSEEEEESSC
T ss_pred EEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC------CHHHHHHHHc-CCceEEeecCc
Confidence 34433233334455666556643 4445555444555677889998866555 7899999997 55556555553
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 253 NPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+. ....+.-+.+++.|++.|+-.++
T Consensus 75 ~~---~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 75 SH---PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp SC---CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred ch---hhhhhhhhhHHHhhhccccceEE
Confidence 32 22345678899999998876664
No 398
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=84.74 E-value=13 Score=33.57 Aligned_cols=100 Identities=20% Similarity=0.320 Sum_probs=67.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEE---E---cCC---Cc--hh---HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHh
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVI---L---FAP---FY--DS---YEATLSMAGAKIKCITLRPPDFAIPIEELKS 237 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl---v---~~p---~y--~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~ 237 (434)
-+.+-+|+.....++..++ +.|..|. . .++ .| ++ ....++.+|++++...... ...-..++|.+
T Consensus 3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g-~~e~eve~L~~ 80 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSG-EEEREVEELKE 80 (223)
T ss_pred EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCc-cchhhHHHHHH
Confidence 4677788898877665554 3343321 1 112 12 11 2345777999988887763 23335777877
Q ss_pred hccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 238 TISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 238 ~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+++. +..+|+ +|.+.+..+...+-.+|++-|+-++.
T Consensus 81 ~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~~ 117 (223)
T COG2102 81 ALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVYA 117 (223)
T ss_pred HHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEee
Confidence 7765 455665 79999999999999999999987764
No 399
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=79.70 E-value=23 Score=33.60 Aligned_cols=139 Identities=19% Similarity=0.149 Sum_probs=74.9
Q ss_pred CCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhH---HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--
Q 013883 167 VDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY---EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-- 241 (434)
Q Consensus 167 ~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-- 241 (434)
+..+ -+++|.|+.....++..-+.+.|-++++-+-.-.+. ...++..| ++..+-.|-.+ .-++..+.+.+++
T Consensus 36 v~g~-~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~-~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGE-IVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISD-REEIYRLAKKVKKEV 112 (300)
T ss_pred ccCC-EEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCC-HHHHHHHHHHHHHhc
Confidence 4444 677788888877888888888888776544333332 23333345 66666555211 1123334444444
Q ss_pred CCcEEEecCC---CCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcc
Q 013883 242 NTRAILMNTP---HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSL 318 (434)
Q Consensus 242 ~~~~i~~~~p---~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 318 (434)
+..-|++||. ++-.....++|++++..++=- .+.|.....+ -...+....++++.+.|..-.+|.
T Consensus 113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~-----------~~~f~t~kaF-LP~M~~~~~GHIV~IaS~aG~~g~ 180 (300)
T KOG1201|consen 113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNT-----------IAHFWTTKAF-LPKMLENNNGHIVTIASVAGLFGP 180 (300)
T ss_pred CCceEEEeccccccCCCccCCCHHHHHHHHHHhh-----------HHHHHHHHHH-hHHHHhcCCceEEEehhhhcccCC
Confidence 4556777776 333344568888888766422 1111111011 111112234677888887777776
Q ss_pred cc
Q 013883 319 TG 320 (434)
Q Consensus 319 ~G 320 (434)
+|
T Consensus 181 ~g 182 (300)
T KOG1201|consen 181 AG 182 (300)
T ss_pred cc
Confidence 66
No 400
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=77.18 E-value=29 Score=33.15 Aligned_cols=92 Identities=15% Similarity=0.206 Sum_probs=52.3
Q ss_pred CCCCCcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCc-
Q 013883 167 VDPEKEVTVTSGCTEAIAATILGL-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTR- 244 (434)
Q Consensus 167 ~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~- 244 (434)
+.+...|+=.+++.-+|.+++.+- ..-.-.+++|+..-.....+++.+|++++.+|-.+....=-.+.+++.....+.
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~~~p~~ 138 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAAEIPGY 138 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHHhCCCc
Confidence 666644554555555665554443 333334555666666678899999999999886321111123444444444544
Q ss_pred EEEe---cCCCCCcccC
Q 013883 245 AILM---NTPHNPTGKM 258 (434)
Q Consensus 245 ~i~~---~~p~NPTG~~ 258 (434)
+++. .||.||-..-
T Consensus 139 ~~~~~Qf~NpaN~~aH~ 155 (300)
T COG0031 139 AVWLNQFENPANPEAHY 155 (300)
T ss_pred eEchhhcCCCccHHHHH
Confidence 6665 4666665543
No 401
>PRK10595 SOS cell division inhibitor; Provisional
Probab=76.61 E-value=36 Score=29.33 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=66.7
Q ss_pred cEEEc---CChHH-HHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC-CCCCCCCHHHHHhhcccCCcEE
Q 013883 172 EVTVT---SGCTE-AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR-PPDFAIPIEELKSTISKNTRAI 246 (434)
Q Consensus 172 ~i~~t---~G~~~-ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~~~~~i 246 (434)
+|+.. .|-.+ .+.=+++.+...+.-|+...|-+..+...+...|++...+-.- ..+-.-.+..+|++++.+.-..
T Consensus 30 Ell~~~~qpg~~e~LLlP~L~~l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~a 109 (164)
T PRK10595 30 ELVYREDQPMMTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSV 109 (164)
T ss_pred EEeecCCCchHHHHHHHHHHHHHhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcE
Confidence 56663 44444 3333344445667788888999999999999999875544321 1122224678889998876555
Q ss_pred EecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 247 LMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 247 ~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
++.-.. + .++.+++++|--.|++-+.+.|+
T Consensus 110 VL~Wlp---~-~l~~~~~RRLQlAAe~g~~l~fl 139 (164)
T PRK10595 110 VLGWLP---D-ELTEEEHARLVDAAQEGNAMGFI 139 (164)
T ss_pred EEECCc---c-cCCHHHHHHHHHHHHhCCCEEEE
Confidence 554421 1 24677899998877776665544
No 402
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=75.64 E-value=35 Score=31.08 Aligned_cols=99 Identities=16% Similarity=0.223 Sum_probs=66.0
Q ss_pred EEEcCChHHHHHHHHHHccCCCCeEEE----cC----CCch-----hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc
Q 013883 173 VTVTSGCTEAIAATILGLINPGDEVIL----FA----PFYD-----SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI 239 (434)
Q Consensus 173 i~~t~G~~~ai~~~~~~l~~~gd~Vlv----~~----p~y~-----~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i 239 (434)
++.-+||.....++..+..+ -+.+.+ +. ..|+ -...+++.+|++++.++.... ..--.+.+++++
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~-~e~~~e~l~~~l 81 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT-EEDEVEELKGIL 81 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC-ccHHHHHHHHHH
Confidence 56778989988888877766 543333 11 1121 234567889999887765421 222356666666
Q ss_pred cc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 240 SK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 240 ~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+. +..+|+ +|.+.+..+...+-++|.+.|+..+.
T Consensus 82 ~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~~ 116 (223)
T TIGR00290 82 HTLDVEAVV-------FGAIYSEYQKTRIERVCRELGLKSFA 116 (223)
T ss_pred HHcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEec
Confidence 54 555554 79999999999999999999988764
No 403
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=75.09 E-value=14 Score=31.88 Aligned_cols=90 Identities=16% Similarity=0.125 Sum_probs=53.0
Q ss_pred EEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCC
Q 013883 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPH 252 (434)
Q Consensus 173 i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~ 252 (434)
|+++.++...-..++..+++.|-+|.+..-.-..... ..+++++ ..+. .|.+.+.+++. +..+|+.+.+.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~--~~d~----~d~~~~~~al~-~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEII--QGDL----FDPDSVKAALK-GADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEE--ESCT----TCHHHHHHHHT-TSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccc--eeee----hhhhhhhhhhh-hcchhhhhhhh
Confidence 3454444445555677777777666554443333333 4444444 3332 37788999887 56666665443
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCc
Q 013883 253 NPTGKMFTREELNVIASLCIENDV 276 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~ 276 (434)
++. ..+..+.+++.|+++++
T Consensus 71 ~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 71 PPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp TTT----HHHHHHHHHHHHHHTTS
T ss_pred hcc----ccccccccccccccccc
Confidence 333 25668888998888664
No 404
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=74.53 E-value=32 Score=29.77 Aligned_cols=89 Identities=10% Similarity=0.108 Sum_probs=60.8
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEc-CCCCCCCCHHHHHhhcccCCcEEEecC-CCCCcccCCCHHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITL-RPPDFAIPIEELKSTISKNTRAILMNT-PHNPTGKMFTREEL 264 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i~~~~~~i~~~~-p~NPTG~~~~~e~l 264 (434)
+..+...+..|+...|-+..+...+...|++...+-. ...+-.-.+..+|++++.+.-..+++- |+ .++.+++
T Consensus 53 L~~Ls~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL~WLp~-----~l~~~~l 127 (168)
T TIGR00623 53 LQQLGQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVIGWLTD-----ELTEEEH 127 (168)
T ss_pred HHHhcccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEEecCCc-----cCCHHHH
Confidence 3444456777888888888999999999997655532 211222247889999998776655554 42 2567889
Q ss_pred HHHHHHHHHcCcEEEE
Q 013883 265 NVIASLCIENDVLVFS 280 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~ 280 (434)
++|--.|+.-+.+.|+
T Consensus 128 RRLqlAA~~G~al~fl 143 (168)
T TIGR00623 128 AKLVRAAEEGNAMGFI 143 (168)
T ss_pred HHHHHHHHhCCCeEEE
Confidence 9998877776665554
No 405
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=73.62 E-value=50 Score=31.32 Aligned_cols=129 Identities=18% Similarity=0.209 Sum_probs=74.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCe--EEEc--CCCchhHHHHHHH--cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDE--VILF--APFYDSYEATLSM--AGAKIKCITLRPPDFAIPIEELKSTISKNTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~--Vlv~--~p~y~~~~~~~~~--~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~ 245 (434)
+|++|-|.+.-+..++....++|++ |+|. .|.+.+|...-.. .|++...++ | ..+-+...+-.|+
T Consensus 164 EviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~--------d-aaVfA~MsrVnKV 234 (353)
T KOG1465|consen 164 EVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP--------D-AAVFAMMSRVNKV 234 (353)
T ss_pred ceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec--------c-HHHHHHhhhcceE
Confidence 7999999999999998888777654 5554 3555565554443 566655554 2 2233334433344
Q ss_pred EEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc
Q 013883 246 ILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS 317 (434)
Q Consensus 246 i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 317 (434)
|+-...--+.|-+....-...++..|++|-+++|+=.-..-+. ++ ++-.+|..+.++|.++.+.
T Consensus 235 Iigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp~yKLs------Pl--yp~~~ds~~~f~s~~~il~ 298 (353)
T KOG1465|consen 235 IIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAPMYKLS------PL--YPTNPDSFHEFRSPSEILP 298 (353)
T ss_pred EEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecchhhcC------CC--CCCCHHHHHhcCCcccccC
Confidence 4444443344444444445668888899999988733222111 11 1222344556666666664
No 406
>PRK08265 short chain dehydrogenase; Provisional
Probab=70.85 E-value=57 Score=30.06 Aligned_cols=94 Identities=16% Similarity=0.104 Sum_probs=53.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...+.+.|-.|++.+-.-.......+..+.++..+..|-. |.+.+++++.. +...
T Consensus 8 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~----~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 8 VAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDIT----DDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCC----CHHHHHHHHHHHHHHhCCCCE
Confidence 5777776666667777778888988887655433344444555666666666532 34455444432 3455
Q ss_pred EEecCC-CCCcccCCCHHHHHHHHH
Q 013883 246 ILMNTP-HNPTGKMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p-~NPTG~~~~~e~l~~i~~ 269 (434)
++.+.. ..+.+...+.++++++.+
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 84 LVNLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred EEECCCCCCCCcCcCCHHHHHHHHh
Confidence 554422 222333456666666543
No 407
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=69.18 E-value=6.8 Score=41.25 Aligned_cols=43 Identities=16% Similarity=0.196 Sum_probs=36.2
Q ss_pred EEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccC
Q 013883 245 AILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE 290 (434)
Q Consensus 245 ~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~ 290 (434)
.+..=.|++..| ++|+++++++-|+++|+-||+|-+|.+|--+
T Consensus 200 ~~g~yAp~sryG---tPedfk~fVD~aH~~GIgViLD~V~~HF~~d 242 (628)
T COG0296 200 GTGYYAPTSRYG---TPEDFKALVDAAHQAGIGVILDWVPNHFPPD 242 (628)
T ss_pred cceeccccccCC---CHHHHHHHHHHHHHcCCEEEEEecCCcCCCC
Confidence 344446888888 7889999999999999999999999997543
No 408
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=68.70 E-value=15 Score=35.05 Aligned_cols=75 Identities=9% Similarity=0.083 Sum_probs=47.7
Q ss_pred EcCCCchhHHHHHHH--cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCc
Q 013883 199 LFAPFYDSYEATLSM--AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDV 276 (434)
Q Consensus 199 v~~p~y~~~~~~~~~--~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~ 276 (434)
.--|+|....++.+. ..+-++.+|-.. -++.+++....+.|.+++.+-.. +.++-++|.++|+++|+
T Consensus 49 ~G~~~y~sv~dlp~~~~~DlAvi~vp~~~-----v~~~l~e~~~~gvk~avI~s~Gf------~~~~~~~l~~~a~~~gi 117 (291)
T PRK05678 49 LGLPVFNTVAEAVEATGANASVIYVPPPF-----AADAILEAIDAGIDLIVCITEGI------PVLDMLEVKAYLERKKT 117 (291)
T ss_pred eCeeccCCHHHHhhccCCCEEEEEcCHHH-----HHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCC
Confidence 344556666666654 344455554331 36777887778888876654332 24555689999999999
Q ss_pred EEEEcCcC
Q 013883 277 LVFSDEVY 284 (434)
Q Consensus 277 ~iI~Deay 284 (434)
.++==.+.
T Consensus 118 rvlGPNc~ 125 (291)
T PRK05678 118 RLIGPNCP 125 (291)
T ss_pred EEECCCCC
Confidence 99854443
No 409
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=68.06 E-value=19 Score=29.50 Aligned_cols=57 Identities=16% Similarity=0.192 Sum_probs=42.4
Q ss_pred CEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEe--cCC---CCCcccCCCHHHHHHHHHHHHHcC
Q 013883 216 AKIKCITLRPPDFAIPIEELKSTISKNTRAILM--NTP---HNPTGKMFTREELNVIASLCIEND 275 (434)
Q Consensus 216 ~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~--~~p---~NPTG~~~~~e~l~~i~~la~~~~ 275 (434)
.+++.||.. +.+|++.+.+++..+...|++ +.| |+..|.....+.++.+.++.++.|
T Consensus 29 vriIrvpC~---Grv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 29 VRIIRVPCS---GRVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred eEEEEccCC---CccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 455556553 688999999999998888877 233 678898887777777777776654
No 410
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=67.96 E-value=20 Score=34.64 Aligned_cols=107 Identities=21% Similarity=0.252 Sum_probs=73.4
Q ss_pred cCChHHHHHHHHHHccCCCCeEEEcCC-Cchh-----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEec
Q 013883 176 TSGCTEAIAATILGLINPGDEVILFAP-FYDS-----YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMN 249 (434)
Q Consensus 176 t~G~~~ai~~~~~~l~~~gd~Vlv~~p-~y~~-----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~ 249 (434)
+.|=|--+.-+...+.+.|-.|++..- +|-. ...+.+..|.+++.-+...+--.+-+|.++.+..++...|++-
T Consensus 149 G~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~DvvliD 228 (340)
T COG0552 149 GVGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVVLID 228 (340)
T ss_pred CCchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 345567777778888888988777543 5543 3345667888887654221112244688888888899999887
Q ss_pred CC---CCCcccCCCHHHHHHHHHHHHHcC------cEEEEcCcCC
Q 013883 250 TP---HNPTGKMFTREELNVIASLCIEND------VLVFSDEVYD 285 (434)
Q Consensus 250 ~p---~NPTG~~~~~e~l~~i~~la~~~~------~~iI~Deay~ 285 (434)
+. ||-+.. .+++++|.+++++.. ++++.|..-+
T Consensus 229 TAGRLhnk~nL---M~EL~KI~rV~~k~~~~ap~e~llvlDAttG 270 (340)
T COG0552 229 TAGRLHNKKNL---MDELKKIVRVIKKDDPDAPHEILLVLDATTG 270 (340)
T ss_pred CcccccCchhH---HHHHHHHHHHhccccCCCCceEEEEEEcccC
Confidence 65 777664 358999999998764 6777787543
No 411
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=67.13 E-value=62 Score=31.05 Aligned_cols=58 Identities=14% Similarity=0.204 Sum_probs=38.9
Q ss_pred CCCCCHHHHHhhccc------CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCcc
Q 013883 227 DFAIPIEELKSTISK------NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKL 287 (434)
Q Consensus 227 ~~~~d~~~l~~~i~~------~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~ 287 (434)
+..++.+++++.++. +-.+|++ +-+=|-|. +.+...+|+++|++.++.+++|..-..+
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~Vvl-sGSlP~g~--~~d~y~~li~~~~~~g~~vilD~Sg~~L 171 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVL-SGSLPPGV--PPDAYAELIRILRQQGAKVILDTSGEAL 171 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEE-eCCCCCCC--CHHHHHHHHHHHHhcCCeEEEECChHHH
Confidence 445565555554432 2334444 34456664 6778999999999999999999876554
No 412
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=66.06 E-value=59 Score=30.79 Aligned_cols=102 Identities=7% Similarity=0.050 Sum_probs=58.3
Q ss_pred CHHHHHhhccc-CCcEEEecCC-CCCcccCCCHH--------HHHHHHHHHHHcCcEEEEcCcCCccccCCCCc-cccCC
Q 013883 231 PIEELKSTISK-NTRAILMNTP-HNPTGKMFTRE--------ELNVIASLCIENDVLVFSDEVYDKLAFEMDHI-SIASL 299 (434)
Q Consensus 231 d~~~l~~~i~~-~~~~i~~~~p-~NPTG~~~~~e--------~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~-~~~~~ 299 (434)
|.+.+++.+++ ++.+|+.+-. ++.-..--.+| --+.|+++|++.|+++|. +-.+++|+|... +...-
T Consensus 38 d~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh--iSTDyVFDG~~~~~Y~E~ 115 (281)
T COG1091 38 DPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH--ISTDYVFDGEKGGPYKET 115 (281)
T ss_pred ChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE--eecceEecCCCCCCCCCC
Confidence 67888888876 5788876654 44444333222 245688999999999985 223455665442 12221
Q ss_pred CCCCCceEEEccCChhhccc----------cceeeeEEeC--hhhHHHH
Q 013883 300 PGMYERTVTMNSLGKTFSLT----------GWKIGWAIAP--PHLTWGV 336 (434)
Q Consensus 300 ~~~~~~~i~i~S~SK~~g~~----------G~R~G~~~~~--~~~~~~l 336 (434)
+ ..+=+-++.-||..|=- =+|.+|+.+. ..++..+
T Consensus 116 D--~~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tm 162 (281)
T COG1091 116 D--TPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTM 162 (281)
T ss_pred C--CCCChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHH
Confidence 1 11223455666655422 2478888876 3455443
No 413
>PRK04296 thymidine kinase; Provisional
Probab=66.04 E-value=21 Score=31.51 Aligned_cols=94 Identities=15% Similarity=0.242 Sum_probs=53.1
Q ss_pred HHHHHHHHHccCCCCeEEEcCCCch---hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc---cCCcEEEecCCCCC
Q 013883 181 EAIAATILGLINPGDEVILFAPFYD---SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS---KNTRAILMNTPHNP 254 (434)
Q Consensus 181 ~ai~~~~~~l~~~gd~Vlv~~p~y~---~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~---~~~~~i~~~~p~NP 254 (434)
.++.. +..+...|..|++..|.+. ....++..+|.++..+... ..+.+.+.+. .+..+|++-..+
T Consensus 18 ~~l~~-~~~~~~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~~------~~~~~~~~~~~~~~~~dvviIDEaq-- 88 (190)
T PRK04296 18 ELLQR-AYNYEERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPVS------SDTDIFELIEEEGEKIDCVLIDEAQ-- 88 (190)
T ss_pred HHHHH-HHHHHHcCCeEEEEeccccccccCCcEecCCCCcccceEeC------ChHHHHHHHHhhCCCCCEEEEEccc--
Confidence 44444 4444456788887766322 1334455566544332221 2233333332 256777776553
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCc
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDK 286 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~ 286 (434)
.++.+++.++++.++..++.+|+=.-...
T Consensus 89 ---~l~~~~v~~l~~~l~~~g~~vi~tgl~~~ 117 (190)
T PRK04296 89 ---FLDKEQVVQLAEVLDDLGIPVICYGLDTD 117 (190)
T ss_pred ---cCCHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 35677788899988888988887444333
No 414
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=65.97 E-value=85 Score=28.60 Aligned_cols=99 Identities=14% Similarity=0.203 Sum_probs=63.6
Q ss_pred EEEcCChHHHHHHHHHHccCCCCeEEE--cCC------Cc-----hhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc
Q 013883 173 VTVTSGCTEAIAATILGLINPGDEVIL--FAP------FY-----DSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI 239 (434)
Q Consensus 173 i~~t~G~~~ai~~~~~~l~~~gd~Vlv--~~p------~y-----~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i 239 (434)
++.-+||.....++..+.-+ .+.+.+ ..| +| .-...+++.+|++++.+.... ...--++++.+.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~-~~e~~~~~l~~~l 81 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSG-EEEKEVEDLAGQL 81 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCC-chhHHHHHHHHHH
Confidence 45678888887777766555 443332 111 12 224456788999987776543 1111245555555
Q ss_pred cc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 240 SK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 240 ~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
.. +..+|+ +|.+.+..+...+-++|++.|+..+.
T Consensus 82 ~~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~~ 116 (222)
T TIGR00289 82 GELDVEALC-------IGAIESNYQKSRIDKVCRELGLKSIA 116 (222)
T ss_pred HHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEec
Confidence 44 555555 79999999999999999999988764
No 415
>PLN02955 8-amino-7-oxononanoate synthase
Probab=65.51 E-value=97 Score=31.78 Aligned_cols=137 Identities=15% Similarity=0.195 Sum_probs=75.7
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH-HHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHc---
Q 013883 139 KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLINPGDEVILFAPFYDSYEATLSMA--- 214 (434)
Q Consensus 139 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~-~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~--- 214 (434)
.+.|......++++++..+-+. +||...... ..+.++... +-++..+..+.+..+ .++..-.|.....++..+
T Consensus 109 SndYLGL~~~p~v~~a~~~ai~-~yG~g~~gS-rl~~G~~~~h~~LE~~LA~f~g~e~-all~sSGy~AN~~~i~aL~~~ 185 (476)
T PLN02955 109 GNDYLGLSSHPTISNAAANAAK-EYGMGPKGS-ALICGYTTYHRLLESSLADLKKKED-CLVCPTGFAANMAAMVAIGSV 185 (476)
T ss_pred ccCccCCCCCHHHHHHHHHHHH-HcCCCCCCc-CccccChHHHHHHHHHHHHHHCCCc-EEEECChHHHHHHHHHHHhhc
Confidence 4678888888999999999886 577654444 344444333 347777777776544 555556666655555443
Q ss_pred ------------CCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 215 ------------GAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 215 ------------G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
+-+.. +=+|.....--.+.++- .+.+..+-++..+|| +.+.++++.+-+.+...+||+|-
T Consensus 186 ~~~~~~~~~~~~~~~d~-i~~D~~~HaSI~dG~~l-s~~~~~a~~~~f~HN------D~~~Le~~L~~~~~~~~~Vv~Eg 257 (476)
T PLN02955 186 ASLLAASGKPLKNEKVA-IFSDALNHASIIDGVRL-AERQGNVEVFVYRHC------DMYHLNSLLSSCKMKRKVVVTDS 257 (476)
T ss_pred cccccccccccCCCCcE-EEEeccchHHHHHHHHh-ccccCCceEEEeCCC------CHHHHHHHHHhCCCCceEEEEeC
Confidence 11111 11121111001122211 111112333335677 45677777765555678999999
Q ss_pred cCCc
Q 013883 283 VYDK 286 (434)
Q Consensus 283 ay~~ 286 (434)
+|..
T Consensus 258 V~Sm 261 (476)
T PLN02955 258 LFSM 261 (476)
T ss_pred CCCC
Confidence 9876
No 416
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=64.41 E-value=54 Score=29.61 Aligned_cols=87 Identities=22% Similarity=0.235 Sum_probs=54.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCc-hhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFY-DSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNT 250 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~ 250 (434)
.+++..||..|..- +..+++.|..|.+..|.. +.........++..+. ...+.+.+. +..+|++++
T Consensus 14 ~VlvvGgG~va~rK-a~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~-------~~~~~~~~~-----~~~lviaAt 80 (210)
T COG1648 14 KVLVVGGGSVALRK-ARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE-------REFDAEDLD-----DAFLVIAAT 80 (210)
T ss_pred EEEEECCCHHHHHH-HHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh-------cccChhhhc-----CceEEEEeC
Confidence 67777777887775 566888899999999988 4445555555432221 222444332 233444433
Q ss_pred CCCCcccCCCHHHHHHHHHHHHHcCcEEE
Q 013883 251 PHNPTGKMFTREELNVIASLCIENDVLVF 279 (434)
Q Consensus 251 p~NPTG~~~~~e~l~~i~~la~~~~~~iI 279 (434)
. +.+.=++|.+.|+++++++=
T Consensus 81 ~--------d~~ln~~i~~~a~~~~i~vN 101 (210)
T COG1648 81 D--------DEELNERIAKAARERRILVN 101 (210)
T ss_pred C--------CHHHHHHHHHHHHHhCCcee
Confidence 3 33456789999999887663
No 417
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=63.51 E-value=67 Score=24.78 Aligned_cols=71 Identities=13% Similarity=0.085 Sum_probs=46.0
Q ss_pred CCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 202 PFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 202 p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
.....|...++..|.+.... -...+..-....+++.+. ++.+|++. |+. .+-+-...+.+.|+++|++++.
T Consensus 10 ~~~~~~~~~~~~~G~~~~~h-g~~~~~~~~~~~l~~~i~-~aD~VIv~-----t~~-vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 10 DRERRYKRILEKYGGKLIHH-GRDGGDEKKASRLPSKIK-KADLVIVF-----TDY-VSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred ccHHHHHHHHHHcCCEEEEE-ecCCCCccchhHHHHhcC-CCCEEEEE-----eCC-cChHHHHHHHHHHHHcCCcEEE
Confidence 44566888999999999888 222222223334666665 45666542 222 2445678888999999999885
No 418
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=63.35 E-value=95 Score=29.65 Aligned_cols=93 Identities=20% Similarity=0.241 Sum_probs=59.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCC--eEEE--cCCCchhHHH--HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGD--EVIL--FAPFYDSYEA--TLSMAGAKIKCITLRPPDFAIPIEELKSTISK---- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd--~Vlv--~~p~y~~~~~--~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~---- 241 (434)
++++|.|.+.+...++....+.|. +|++ ..|.+.++.. .+...|.++..++-. .+...+++
T Consensus 121 ~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~Ds---------a~~~~~~~vd~V 191 (301)
T COG1184 121 DVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIVDS---------AVGAFMSRVDKV 191 (301)
T ss_pred CEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEech---------HHHHHHHhCCEE
Confidence 799999999998888888888875 5665 3588887654 477788877766421 12222222
Q ss_pred --CCcEEEec-CCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 242 --NTRAILMN-TPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 242 --~~~~i~~~-~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+...|+-+ .--|--|.. -|+..|++++.++++
T Consensus 192 ivGad~I~~nG~lvnkiGT~-------~lA~~A~e~~~Pf~v 226 (301)
T COG1184 192 LVGADAILANGALVNKIGTS-------PLALAARELRVPFYV 226 (301)
T ss_pred EECccceecCCcEEeccchH-------HHHHHHHHhCCCEEE
Confidence 22233322 224455544 388889999888775
No 419
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=62.43 E-value=47 Score=26.72 Aligned_cols=63 Identities=10% Similarity=0.183 Sum_probs=38.4
Q ss_pred cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 214 AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 214 ~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
.|+++..|+..+.++. ..+.+.+..+..-++++.| +|-|......+-..|.+.|.+++++++.
T Consensus 44 ~Gi~v~~vk~~~~~g~---~~i~~~i~~g~i~~VInt~-~~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 44 TGLTVNRMKSGPLGGD---QQIGALIAEGEIDAVIFFR-DPLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hCCcEEEEecCCCCch---hHHHHHHHcCceeEEEEcC-CCCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 5777777744322332 3456666665555556555 3323332244677899999999998875
No 420
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=62.28 E-value=3.7 Score=40.91 Aligned_cols=35 Identities=20% Similarity=0.134 Sum_probs=31.1
Q ss_pred cccccCcCccCCCcccccccccccceeEeeecccc
Q 013883 11 ESKMLKPSAFGSSFSSSALLSFSKHLHTISITDSA 45 (434)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (434)
-+.+|||+++++.+|+.+..+|.|+++.+..++.+
T Consensus 358 pNHvLPT~G~Ar~~sgLsv~~FlK~~s~~~~s~~~ 392 (426)
T PRK12447 358 TNHVLPTSGAARYTGGLWVGKFLKTVTYQRVTDEA 392 (426)
T ss_pred CCcccCCCcceeecCCCcHHHhccceeEEEECHHH
Confidence 46799999999999999999999999888877644
No 421
>PRK13769 histidinol dehydrogenase; Provisional
Probab=62.13 E-value=4.4 Score=39.55 Aligned_cols=33 Identities=15% Similarity=0.043 Sum_probs=29.0
Q ss_pred ecccccCcCccCCCcccccccccccceeEeeec
Q 013883 10 CESKMLKPSAFGSSFSSSALLSFSKHLHTISIT 42 (434)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 (434)
.-+.+|||.++++.+|+.+..+|.|+.+.+..+
T Consensus 311 GpNHvLPT~G~AR~~sgLsv~~FlK~~t~~~~~ 343 (368)
T PRK13769 311 GISHVLPTGGTARWRGIITPLTFMKPIGVAEAV 343 (368)
T ss_pred CCCCcCCCCcceeccCCCcHHHcccceeEEEeh
Confidence 346799999999999999999999998877654
No 422
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=61.99 E-value=3.7 Score=40.43 Aligned_cols=35 Identities=14% Similarity=0.286 Sum_probs=31.0
Q ss_pred cccccCcCccCCCcccccccccccceeEeeecccc
Q 013883 11 ESKMLKPSAFGSSFSSSALLSFSKHLHTISITDSA 45 (434)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (434)
-+.+|||.++++.+|+.+..+|.|+.+.+..++.+
T Consensus 332 ~NHvLPT~G~Ar~~sgL~v~~F~K~~s~~~~s~~~ 366 (393)
T TIGR00069 332 PNHVLPTGGTARFYSGLSVLDFLKRITVQRLSKEG 366 (393)
T ss_pred CCcccCCCcceeecCCccHHHhccceeEEEECHHH
Confidence 46799999999999999999999999988877533
No 423
>PRK13770 histidinol dehydrogenase; Provisional
Probab=61.77 E-value=3.9 Score=40.61 Aligned_cols=35 Identities=11% Similarity=0.120 Sum_probs=31.0
Q ss_pred cccccCcCccCCCcccccccccccceeEeeecccc
Q 013883 11 ESKMLKPSAFGSSFSSSALLSFSKHLHTISITDSA 45 (434)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (434)
-+.+|||.++++.+|+.+..+|.|+++.+..++.+
T Consensus 353 pNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~ 387 (416)
T PRK13770 353 PSHVLPTNRTARFTNGLSVNDFLTRNTVIHLSKDT 387 (416)
T ss_pred CCCcCCCCcceeccCCCcHHHeecceeeEEECHHH
Confidence 46799999999999999999999999888877644
No 424
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=61.72 E-value=1.1e+02 Score=27.73 Aligned_cols=100 Identities=18% Similarity=0.173 Sum_probs=57.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEE----c-CC---Cch-----hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhh
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVIL----F-AP---FYD-----SYEATLSMAGAKIKCITLRPPDFAIPIEELKST 238 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv----~-~p---~y~-----~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~ 238 (434)
-+++-+||.....++.+++.+ .+.+.+ + .. .|+ -...+++.+|++.+.++.... ..--.+++.++
T Consensus 3 ~v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~-~~~~~~~l~~~ 80 (218)
T PF01902_consen 3 VVALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGD-EEDYVEDLKEA 80 (218)
T ss_dssp EEEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE----CCCHHHHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCc-cchhhHHHHHH
Confidence 356678889888887777666 443222 1 11 121 145668889999998888631 11125777777
Q ss_pred ccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 239 ISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 239 i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+++ +..+++ +|.+.+.+....+-++|.+.|+-.+.
T Consensus 81 l~~~~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~~ 116 (218)
T PF01902_consen 81 LKELKVEAVV-------FGDIDSEYQRNWVERVCERLGLEAVF 116 (218)
T ss_dssp HCTC--SEEE---------TTS-HHHHHHHHHHHHHCT-EEE-
T ss_pred HHHcCCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEEe
Confidence 755 444444 78899888899999999999988775
No 425
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=61.25 E-value=81 Score=30.81 Aligned_cols=105 Identities=9% Similarity=0.071 Sum_probs=58.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeE--EEcCCCch------hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEV--ILFAPFYD------SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~V--lv~~p~y~------~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~ 243 (434)
.|+..+||.....++....-.-|..+ +..++.|. +...+++.+|.+...+..+ .+.+........
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~d-------~~~~~~l~~~~~ 134 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITIN-------PETFRKLQRAYF 134 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeCC-------HHHHHHHHHHHH
Confidence 67778998877766533222224333 34455554 3455677799888877655 333333222111
Q ss_pred cEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCcccc
Q 013883 244 RAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 289 (434)
Q Consensus 244 ~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~ 289 (434)
+ ...+|-... .......+.++|+++|+.+|++.-..+-.+
T Consensus 135 ~-----~~~~pc~~c-~~~~~~~l~~~A~~~gi~~Il~G~~~dE~f 174 (343)
T TIGR03573 135 K-----KVGDPEWPQ-DHAIFASVYQVALKFNIPLIIWGENIAEEY 174 (343)
T ss_pred h-----ccCCCchhh-hhHHHHHHHHHHHHhCCCEEEeCCCHHHhc
Confidence 1 122332221 122456788899999999988755544333
No 426
>PRK06194 hypothetical protein; Provisional
Probab=61.14 E-value=1.1e+02 Score=28.41 Aligned_cols=92 Identities=10% Similarity=0.048 Sum_probs=50.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH---HHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL---SMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...+.+.|..|++.+-.-....... ...|.++..+..|-. |.+.+++++.. +
T Consensus 8 ~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 8 VAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVS----DAAQVEALADAALERFGA 83 (287)
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCC----CHHHHHHHHHHHHHHcCC
Confidence 5777777666666677778888988877654333333332 223666766665531 45555554432 3
Q ss_pred CcEEEecCCCCCccc--CCCHHHHHHH
Q 013883 243 TRAILMNTPHNPTGK--MFTREELNVI 267 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~--~~~~e~l~~i 267 (434)
..+|+.+......+. ..+.+++++.
T Consensus 84 id~vi~~Ag~~~~~~~~~~~~~~~~~~ 110 (287)
T PRK06194 84 VHLLFNNAGVGAGGLVWENSLADWEWV 110 (287)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHH
Confidence 566665543332232 2345555443
No 427
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=59.85 E-value=22 Score=34.61 Aligned_cols=70 Identities=16% Similarity=0.233 Sum_probs=44.0
Q ss_pred HHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 207 YEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 207 ~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+.+.+...+.++...-+.+ .+|.+.+..+.++-..+.. .....+.|-.++.+++++|++.|++++|-||=
T Consensus 23 ~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~----~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 23 YIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGS----TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHHHhCCcEEEEEeecCCcceeeecCcccccccccc----cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4455666788887777653 3455444443322111110 01223556689999999999999999998884
No 428
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=59.52 E-value=27 Score=33.80 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=47.2
Q ss_pred CchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 203 FYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 203 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
.|++|...++.-..+++.++..... -.+-+.-++. +.|.|++.-| . .++.++.++|++.|+++++++++
T Consensus 60 ~y~syEeLakd~~vDvVyi~~~~~q---H~evv~l~l~-~~K~VL~EKP---l--a~n~~e~~~iveaA~~rgv~~me 128 (351)
T KOG2741|consen 60 AYGSYEELAKDPEVDVVYISTPNPQ---HYEVVMLALN-KGKHVLCEKP---L--AMNVAEAEEIVEAAEARGVFFME 128 (351)
T ss_pred cccCHHHHhcCCCcCEEEeCCCCcc---HHHHHHHHHH-cCCcEEeccc---c--cCCHHHHHHHHHHHHHcCcEEEe
Confidence 6888999998888888888776322 1222222232 4566777655 3 45678999999999999966654
No 429
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=59.46 E-value=26 Score=33.29 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=46.9
Q ss_pred EcCCCchhHHHHHHH--cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCc
Q 013883 199 LFAPFYDSYEATLSM--AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDV 276 (434)
Q Consensus 199 v~~p~y~~~~~~~~~--~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~ 276 (434)
.--|+|....++.+. ..+-++.+|-.. -++.++++...+.+++++.+... +..+-++|.++|+++|+
T Consensus 47 ~G~~~y~sv~dlp~~~~~Dlavi~vpa~~-----v~~~l~e~~~~Gvk~avIis~Gf------~e~~~~~l~~~a~~~gi 115 (286)
T TIGR01019 47 LGLPVFDSVKEAVEETGANASVIFVPAPF-----AADAIFEAIDAGIELIVCITEGI------PVHDMLKVKRYMEESGT 115 (286)
T ss_pred cCeeccCCHHHHhhccCCCEEEEecCHHH-----HHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCC
Confidence 344566666666554 234444444331 35777777778888877654432 33345789999999999
Q ss_pred EEEEcCcC
Q 013883 277 LVFSDEVY 284 (434)
Q Consensus 277 ~iI~Deay 284 (434)
.++==.+.
T Consensus 116 rilGPNc~ 123 (286)
T TIGR01019 116 RLIGPNCP 123 (286)
T ss_pred EEECCCCc
Confidence 99854443
No 430
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=59.23 E-value=44 Score=31.47 Aligned_cols=98 Identities=18% Similarity=0.209 Sum_probs=51.9
Q ss_pred HHHHHHHHHccCCCCeEEEcCC-Cc-hh----HHHHHHHcCCEEEEEEcCCCCCCCCH-----HHHHhhcccCCcEEEec
Q 013883 181 EAIAATILGLINPGDEVILFAP-FY-DS----YEATLSMAGAKIKCITLRPPDFAIPI-----EELKSTISKNTRAILMN 249 (434)
Q Consensus 181 ~ai~~~~~~l~~~gd~Vlv~~p-~y-~~----~~~~~~~~G~~~~~v~~~~~~~~~d~-----~~l~~~i~~~~~~i~~~ 249 (434)
.....+...+.+.|.+|++.+- .| .+ .....+..|..++.... ..|+ +.++.+...+...|++-
T Consensus 87 Tt~akLA~~l~~~g~~V~li~~D~~r~~a~~ql~~~~~~~~i~~~~~~~-----~~dp~~~~~~~l~~~~~~~~D~ViID 161 (272)
T TIGR00064 87 TTIAKLANKLKKQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQKE-----GADPAAVAFDAIQKAKARNIDVVLID 161 (272)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCCCHHHHHHHHHHHHhCCeEEEeCCC-----CCCHHHHHHHHHHHHHHCCCCEEEEe
Confidence 3333334445566766665442 23 22 23345666755443221 2233 33344444567888886
Q ss_pred CC-CCCcccCCCHHHHHHHHHHHH------HcCcEEEEcCcC
Q 013883 250 TP-HNPTGKMFTREELNVIASLCI------ENDVLVFSDEVY 284 (434)
Q Consensus 250 ~p-~NPTG~~~~~e~l~~i~~la~------~~~~~iI~Deay 284 (434)
+| .++.- ..-.++++++.+.+. .+++++++|...
T Consensus 162 T~G~~~~d-~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~ 202 (272)
T TIGR00064 162 TAGRLQNK-VNLMDELKKIKRVIKKVDKDAPDEVLLVLDATT 202 (272)
T ss_pred CCCCCcch-HHHHHHHHHHHHHHhcccCCCCceEEEEEECCC
Confidence 66 44431 112346777777777 678888888853
No 431
>PLN02926 histidinol dehydrogenase
Probab=58.68 E-value=4.7 Score=40.24 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=31.3
Q ss_pred cccccCcCccCCCcccccccccccceeEeeecccc
Q 013883 11 ESKMLKPSAFGSSFSSSALLSFSKHLHTISITDSA 45 (434)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (434)
-+.+|||.++++.+|+.|..+|.|+.+.+..++.+
T Consensus 366 pNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~ 400 (431)
T PLN02926 366 TNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEG 400 (431)
T ss_pred cCcccCCCcceeecCCCcHHHhcceeeEEEECHHH
Confidence 46799999999999999999999999998888644
No 432
>PRK06483 dihydromonapterin reductase; Provisional
Probab=58.52 E-value=96 Score=27.88 Aligned_cols=48 Identities=21% Similarity=0.099 Sum_probs=29.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIK 219 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~ 219 (434)
.+++|.|+...-..+...|.+.|.+|++..-.-......+...|...+
T Consensus 4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~ 51 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCI 51 (236)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEE
Confidence 567777766666667777888888877655433333333444565443
No 433
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=58.28 E-value=33 Score=33.32 Aligned_cols=70 Identities=19% Similarity=0.323 Sum_probs=46.9
Q ss_pred CCCCeEEEcCCCch-hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEec-CCCCCcccCCCHHHHHHHHH
Q 013883 192 NPGDEVILFAPFYD-SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMN-TPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 192 ~~gd~Vlv~~p~y~-~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~-~p~NPTG~~~~~e~l~~i~~ 269 (434)
+++..|++.+.... +....+...|+++..||++- +++++.+ -+++.|+++ -|-+|.-... .++.|.+
T Consensus 177 ~~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~t-----~~eeIl~---~~pDGiflSNGPGDP~~~~~---~i~~ik~ 245 (368)
T COG0505 177 EPGKHVVVIDFGVKRNILRELVKRGCRVTVVPADT-----SAEEILA---LNPDGIFLSNGPGDPAPLDY---AIETIKE 245 (368)
T ss_pred CCCcEEEEEEcCccHHHHHHHHHCCCeEEEEcCCC-----CHHHHHh---hCCCEEEEeCCCCChhHHHH---HHHHHHH
Confidence 34567777777655 77788888999999999873 4555543 478899885 4888843332 3444544
Q ss_pred HHH
Q 013883 270 LCI 272 (434)
Q Consensus 270 la~ 272 (434)
+..
T Consensus 246 l~~ 248 (368)
T COG0505 246 LLG 248 (368)
T ss_pred Hhc
Confidence 444
No 434
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=58.21 E-value=1.4e+02 Score=26.83 Aligned_cols=92 Identities=16% Similarity=0.132 Sum_probs=50.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc------cCCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS------KNTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~------~~~~~ 245 (434)
.++++.|+...-..+...+++.|..|.+...............+.++..++.|-. |.+.+++++. .+..+
T Consensus 8 ~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 8 KALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLS----DRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 5777766666666677788888887777655444444444444555555555421 3445554432 14566
Q ss_pred EEecCCCCCcc--cCCCHHHHHHH
Q 013883 246 ILMNTPHNPTG--KMFTREELNVI 267 (434)
Q Consensus 246 i~~~~p~NPTG--~~~~~e~l~~i 267 (434)
++.+....+.+ ...+.+++++.
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~ 107 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSV 107 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHH
Confidence 76654332222 12345555543
No 435
>smart00642 Aamy Alpha-amylase domain.
Probab=58.03 E-value=33 Score=29.61 Aligned_cols=28 Identities=18% Similarity=0.230 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCcc
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKL 287 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~ 287 (434)
+.++++++++-|+++|+-||.|-+..+.
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 5689999999999999999999998764
No 436
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=58.03 E-value=4.5 Score=39.92 Aligned_cols=36 Identities=11% Similarity=0.158 Sum_probs=31.7
Q ss_pred ecccccCcCccCCCcccccccccccceeEeeecccc
Q 013883 10 CESKMLKPSAFGSSFSSSALLSFSKHLHTISITDSA 45 (434)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (434)
.-+.+|||.++++.+|+.+..+|.|..+.+..++.+
T Consensus 335 GpNHvLPT~G~Ar~~sgL~v~~F~K~~s~~~~s~~~ 370 (390)
T cd06572 335 GPNHVLPTGGTARFYSGLSVDDFLKRITVQEYSKEG 370 (390)
T ss_pred CCCCccCCCcceeecCCCCHHHheecceeEEECHHH
Confidence 457899999999999999999999999888877533
No 437
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=57.97 E-value=1.4e+02 Score=26.72 Aligned_cols=92 Identities=20% Similarity=0.211 Sum_probs=52.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTP 251 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p 251 (434)
.+++..||..|... +..|++.|-.|.+.+|....-...+...| ++..+.-. + +.+.+. +. .+++..+
T Consensus 11 ~vlVvGgG~va~rk-~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~~---~--~~~dl~-----~~-~lVi~at 77 (205)
T TIGR01470 11 AVLVVGGGDVALRK-ARLLLKAGAQLRVIAEELESELTLLAEQG-GITWLARC---F--DADILE-----GA-FLVIAAT 77 (205)
T ss_pred eEEEECcCHHHHHH-HHHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeCC---C--CHHHhC-----Cc-EEEEECC
Confidence 67777777777664 46677778778887886654333233333 44433221 1 222221 23 3444445
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCcEE-EEcCc
Q 013883 252 HNPTGKMFTREELNVIASLCIENDVLV-FSDEV 283 (434)
Q Consensus 252 ~NPTG~~~~~e~l~~i~~la~~~~~~i-I~Dea 283 (434)
+++ +.-++|.+.|++.++++ +.|+.
T Consensus 78 ~d~-------~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 78 DDE-------ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred CCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 443 23456889999999888 34543
No 438
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=57.78 E-value=4.9 Score=40.10 Aligned_cols=36 Identities=17% Similarity=0.181 Sum_probs=31.6
Q ss_pred ecccccCcCccCCCcccccccccccceeEeeecccc
Q 013883 10 CESKMLKPSAFGSSFSSSALLSFSKHLHTISITDSA 45 (434)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (434)
.-+.+|||+++++.+|+.+..+|.|+.+.+..++.+
T Consensus 362 GpNHvLPT~G~AR~~sgLsV~~F~K~~s~~~~s~~~ 397 (425)
T PRK00877 362 GPNHVLPTSGTARFSSGLSVYDFLKRSSVIELSKEG 397 (425)
T ss_pred CCCcccCCCcceeecCCccHHHhccceeEEEECHHH
Confidence 457899999999999999999999999888877533
No 439
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=57.53 E-value=5.1 Score=39.84 Aligned_cols=35 Identities=11% Similarity=0.103 Sum_probs=20.7
Q ss_pred cccccCcCccCCCcccccccccccceeEeeecccc
Q 013883 11 ESKMLKPSAFGSSFSSSALLSFSKHLHTISITDSA 45 (434)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (434)
-+.+|||.++++.+|+.+..+|.|+.+.+..++.+
T Consensus 349 pNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~ 383 (412)
T PF00815_consen 349 PNHVLPTGGTARFSSGLSVDDFLKRISVQRYSKEG 383 (412)
T ss_dssp S------TTGGGT---S-GGGGEEEEEEEEE-HHH
T ss_pred CCccCCCCccccccCCCcHHHccceeeEEEECHHH
Confidence 36799999999999999999999999888877533
No 440
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=57.42 E-value=72 Score=28.54 Aligned_cols=108 Identities=18% Similarity=0.185 Sum_probs=62.6
Q ss_pred EEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCC--EEEEEEcCCCCCCCCHHH-HHhhccc-CCcEEEe
Q 013883 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGA--KIKCITLRPPDFAIPIEE-LKSTISK-NTRAILM 248 (434)
Q Consensus 173 i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~--~~~~v~~~~~~~~~d~~~-l~~~i~~-~~~~i~~ 248 (434)
.++|.|+...-.++.+.+.+.|-+|++.+-.-..-...+..+|. .-..+..|-. ..-|.+. |++.++. .+.-+++
T Consensus 17 ~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS-~a~~v~~~l~e~~k~~g~psvlV 95 (256)
T KOG1200|consen 17 AAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVS-KAHDVQNTLEEMEKSLGTPSVLV 95 (256)
T ss_pred eEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccC-cHHHHHHHHHHHHHhcCCCcEEE
Confidence 45555555555666677788999999998888777777887776 2223333211 1113333 3333333 4555555
Q ss_pred cCC-CCCccc--CCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 249 NTP-HNPTGK--MFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 249 ~~p-~NPTG~--~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
++. .+-.+. -+..|+|..++.+-- .+++++.-.
T Consensus 96 ncAGItrD~~Llrmkq~qwd~vi~vNL-~gvfl~tqa 131 (256)
T KOG1200|consen 96 NCAGITRDGLLLRMKQEQWDSVIAVNL-TGVFLVTQA 131 (256)
T ss_pred EcCccccccceeeccHHHHHHHHHhhc-hhhHHHHHH
Confidence 554 443343 568889998876422 355555433
No 441
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=56.25 E-value=1.1e+02 Score=31.05 Aligned_cols=131 Identities=17% Similarity=0.232 Sum_probs=81.5
Q ss_pred CCCcHHHHHHHHHHHHhhcCC-----------CCCCCCcEEEcCChHHHHHHHHHHccCCC--CeEEE-c-CCCchh--H
Q 013883 145 GHGVPEFNSAIASRFKKDSGL-----------EVDPEKEVTVTSGCTEAIAATILGLINPG--DEVIL-F-APFYDS--Y 207 (434)
Q Consensus 145 ~~G~~~lr~~ia~~l~~~~g~-----------~~~~~~~i~~t~G~~~ai~~~~~~l~~~g--d~Vlv-~-~p~y~~--~ 207 (434)
..+-.+|.+.|-+|+..+... .+... ++++|-|....+..++.-..+.| =+|+| . .|.+.+ +
T Consensus 324 ~eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dg-dviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~ 402 (556)
T KOG1467|consen 324 SEAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDG-DVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKL 402 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHH
Confidence 334456777776666554322 24444 68888888888877766554433 23333 3 455555 3
Q ss_pred HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEc-CcCC
Q 013883 208 EATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSD-EVYD 285 (434)
Q Consensus 208 ~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~D-eay~ 285 (434)
...+...|.++.++-+..-.+ + ..+-+++++=++.---.|.+++..--..|+-.++.||+++|+= |+|.
T Consensus 403 lr~Lv~~GinctYv~I~a~sy------i---m~evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE~yK 472 (556)
T KOG1467|consen 403 LRRLVDRGINCTYVLINAASY------I---MLEVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCEAYK 472 (556)
T ss_pred HHHHHHcCCCeEEEEehhHHH------H---HHhcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEechhh
Confidence 444667888888776653111 1 1123555555566566788998888778888899999998874 3443
No 442
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=56.04 E-value=28 Score=27.70 Aligned_cols=22 Identities=27% Similarity=0.265 Sum_probs=16.7
Q ss_pred CCHHHHHHHHHHHHHcCcEEEE
Q 013883 259 FTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 259 ~~~e~l~~i~~la~~~~~~iI~ 280 (434)
.+.++.++|.+++++++..+.+
T Consensus 97 ~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 97 LTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SSHHHHHHHHHHHHHHTSCEEE
T ss_pred CCHHHHHHHHHHHHHhCCEEEE
Confidence 3677888888888888777665
No 443
>PRK07063 short chain dehydrogenase; Provisional
Probab=55.17 E-value=1.7e+02 Score=26.73 Aligned_cols=93 Identities=16% Similarity=0.088 Sum_probs=49.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH-----cCCEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM-----AGAKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-----~G~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.+++|.|+......+...|.+.|.+|++.+-.-......... .+.++..+..|-. |.+.+++++..
T Consensus 9 ~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 9 VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT----DAASVAAAVAAAEEAF 84 (260)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCC----CHHHHHHHHHHHHHHh
Confidence 577777766666667777888898887765443333333322 3455666665531 34444444432
Q ss_pred -CCcEEEecCCCCCcc--cCCCHHHHHHHH
Q 013883 242 -NTRAILMNTPHNPTG--KMFTREELNVIA 268 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG--~~~~~e~l~~i~ 268 (434)
+..+++.+.-....+ ...+.++|++..
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~ 114 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCF 114 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHH
Confidence 455565543222212 234566666544
No 444
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=55.07 E-value=26 Score=33.56 Aligned_cols=69 Identities=14% Similarity=0.159 Sum_probs=42.5
Q ss_pred HHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 207 YEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 207 ~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+.+.+...+.++...-+.+ ++|.+..+.+.++-..... .++ .+.|-.++++++++|++.|+++|+-||-
T Consensus 21 ~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~----~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 21 TIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ----INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhccc----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 3455666788887776653 3454443333332211111 112 2335588999999999999999998884
No 445
>PRK10785 maltodextrin glucosidase; Provisional
Probab=55.03 E-value=36 Score=36.07 Aligned_cols=29 Identities=10% Similarity=0.137 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
+.+++++|++.|+++|+-||.|-++.+..
T Consensus 224 t~~df~~Lv~~aH~rGikVilD~V~NH~~ 252 (598)
T PRK10785 224 GDAALLRLRHATQQRGMRLVLDGVFNHTG 252 (598)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 56899999999999999999999987544
No 446
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=54.93 E-value=75 Score=22.65 Aligned_cols=61 Identities=20% Similarity=0.305 Sum_probs=37.6
Q ss_pred hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCC-HHHHHHHHHHHHHcCcEEEEc
Q 013883 206 SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFT-REELNVIASLCIENDVLVFSD 281 (434)
Q Consensus 206 ~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~-~e~l~~i~~la~~~~~~iI~D 281 (434)
.+.+.++..|.++..... ..+.++ .....+++.+|. +. ++ .+++++|.++.++=|.++|.|
T Consensus 9 a~~~~L~~~g~~v~~~~~-------~~~~l~----~~~~tll~i~~~---~~-~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 9 ALYQLLEEQGVKVERWRK-------PYEALE----ADDGTLLVIGPD---LR-LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHHCCCeeEEecc-------cHHHhC----CCCCEEEEEeCC---CC-CCchHHHHHHHHHHHcCCEEEEeC
Confidence 355667777888765432 134342 233444554554 22 34 488999999999878888865
No 447
>PLN00011 cysteine synthase
Probab=54.64 E-value=1.9e+02 Score=27.89 Aligned_cols=52 Identities=10% Similarity=0.068 Sum_probs=38.4
Q ss_pred cEEEcCChHHHHHHHHHHc-cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEc
Q 013883 172 EVTVTSGCTEAIAATILGL-INPGDEVILFAPFYDSYEATLSMAGAKIKCITL 223 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 223 (434)
.|+..+++..++.++..+- +.-.-+|+++...-..-...++.+|++++.++-
T Consensus 71 ~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 71 TLIEATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred EEEEeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 6777888888887776554 333346777777667778889999999988763
No 448
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=54.31 E-value=1.6e+02 Score=26.89 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=20.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILF 200 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~ 200 (434)
.+++|.|+...-..+...+.+.|..|++.
T Consensus 9 ~~lItGas~gIG~~~a~~l~~~G~~v~~~ 37 (255)
T PRK06463 9 VALITGGTRGIGRAIAEAFLREGAKVAVL 37 (255)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 56777776666666777788888777664
No 449
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=53.98 E-value=2.1e+02 Score=27.56 Aligned_cols=142 Identities=15% Similarity=0.215 Sum_probs=77.9
Q ss_pred CCcHHHHHHHHHHHHcCC-----CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCe
Q 013883 122 DGPDFVKDAAIQAIRDGK-----NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDE 196 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~-----~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~ 196 (434)
|.-...++-+.+++.+.. ..|...+|.......+++.+. -+.. .++++.++..|-.+ +.+..+ --
T Consensus 42 paLd~~~~G~~~aLk~~G~~n~~i~~~na~~~~~~a~~iarql~------~~~~-dviv~i~tp~Aq~~-~s~~~~--iP 111 (322)
T COG2984 42 PALDAAREGVKEALKDAGYKNVKIDYQNAQGDLGTAAQIARQLV------GDKP-DVIVAIATPAAQAL-VSATKT--IP 111 (322)
T ss_pred hhHHHHHHHHHHHHHhcCccCeEEEeecCCCChHHHHHHHHHhh------cCCC-cEEEecCCHHHHHH-HHhcCC--CC
Confidence 334455566666666522 245666677777777777776 2233 57777776655443 333322 12
Q ss_pred EEE---cCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc---ccCCcEE-EecCCCCCcccCCCHHHHHHHHH
Q 013883 197 VIL---FAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI---SKNTRAI-LMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 197 Vlv---~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i---~~~~~~i-~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
|++ ++|.-......++.-|.++..+. ...+++.-.+++ -++.+-| ++.+|+-+. +...++++.+
T Consensus 112 VV~aavtd~v~a~Lv~~~~~pg~NvTGvs-----D~~~v~q~i~lik~~~Pnak~Igv~Y~p~E~n----s~~l~eelk~ 182 (322)
T COG2984 112 VVFAAVTDPVGAKLVKSLEQPGGNVTGVS-----DLLPVAQQIELIKALLPNAKSIGVLYNPGEAN----SVSLVEELKK 182 (322)
T ss_pred EEEEccCchhhccCCccccCCCCceeecC-----CcchHHHHHHHHHHhCCCCeeEEEEeCCCCcc----cHHHHHHHHH
Confidence 333 23332222333334455565442 122344333333 3466555 666775543 4557899999
Q ss_pred HHHHcCcEEEEcC
Q 013883 270 LCIENDVLVFSDE 282 (434)
Q Consensus 270 la~~~~~~iI~De 282 (434)
.+++.|+-+++=.
T Consensus 183 ~A~~~Gl~vve~~ 195 (322)
T COG2984 183 EARKAGLEVVEAA 195 (322)
T ss_pred HHHHCCCEEEEEe
Confidence 9999999999733
No 450
>PRK07060 short chain dehydrogenase; Provisional
Probab=53.60 E-value=1.7e+02 Score=26.28 Aligned_cols=89 Identities=12% Similarity=0.098 Sum_probs=48.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--CCcEEEec
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK--NTRAILMN 249 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~~~i~~~ 249 (434)
.++++.++...-..+...+...|-+|++..-.-..........+..++...+. |.+.+++.+.. +..+|+.+
T Consensus 11 ~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~------~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 11 SVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVG------DDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred EEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCC------CHHHHHHHHHHhCCCCEEEEC
Confidence 57776665555566667777788788876655444444444455555444332 34555555543 35666654
Q ss_pred CCCCCccc--CCCHHHHHH
Q 013883 250 TPHNPTGK--MFTREELNV 266 (434)
Q Consensus 250 ~p~NPTG~--~~~~e~l~~ 266 (434)
....+.+. ..+.+++++
T Consensus 85 ag~~~~~~~~~~~~~~~~~ 103 (245)
T PRK07060 85 AGIASLESALDMTAEGFDR 103 (245)
T ss_pred CCCCCCCChhhCCHHHHHH
Confidence 43333222 234455554
No 451
>PLN03013 cysteine synthase
Probab=53.12 E-value=1.7e+02 Score=29.65 Aligned_cols=78 Identities=9% Similarity=0.016 Sum_probs=46.7
Q ss_pred CCCcHHHHHHHHHHHHhh-cCCCCCCC-CcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCCCchhHHHHHHHcCCEEEEE
Q 013883 145 GHGVPEFNSAIASRFKKD-SGLEVDPE-KEVTVTSGCTEAIAATILGL-INPGDEVILFAPFYDSYEATLSMAGAKIKCI 221 (434)
Q Consensus 145 ~~G~~~lr~~ia~~l~~~-~g~~~~~~-~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v 221 (434)
+.|--..|-+..-..... .|. +.++ ..|+-.+++..++.+++.+- .+-.-.|++++-.-..-...++.+|++++.+
T Consensus 149 PtGSfKdR~A~~~l~~a~~~G~-l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v 227 (429)
T PLN03013 149 PCCSVKDRIGYSMVTDAEQKGF-ISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLT 227 (429)
T ss_pred CccccHHHHHHHHHHHHHHcCC-cCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEE
Confidence 345445554444333221 232 2333 24666677787777666554 3333456667767777788899999999988
Q ss_pred Ec
Q 013883 222 TL 223 (434)
Q Consensus 222 ~~ 223 (434)
+-
T Consensus 228 ~~ 229 (429)
T PLN03013 228 DP 229 (429)
T ss_pred CC
Confidence 53
No 452
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=52.51 E-value=32 Score=33.16 Aligned_cols=63 Identities=13% Similarity=0.197 Sum_probs=39.9
Q ss_pred HHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 207 YEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 207 ~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+.+.+..++.++...-+.+ .+|.+....+-+.-... ..|-.++.+++++|++.|+++|+-||-
T Consensus 23 ~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g-----------~~~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 23 QLDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKA-----------SDGLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred HHHHHHHhCCeEEEEEEecCCCceeecCCCccccccC-----------CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 3455666788877776643 34444433322211111 135568999999999999999998884
No 453
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=52.40 E-value=1.7e+02 Score=26.59 Aligned_cols=75 Identities=9% Similarity=0.070 Sum_probs=45.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|.+|++.+..-..........+.++..+..|- -|.+.+++++.. +..+
T Consensus 8 ~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~----~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 8 VALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDV----TRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred EEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC----CCHHHHHHHHHHHHHHcCCCCE
Confidence 577777766666777778888898888877665555555544455555555542 134455544432 4566
Q ss_pred EEecC
Q 013883 246 ILMNT 250 (434)
Q Consensus 246 i~~~~ 250 (434)
++++.
T Consensus 84 li~~a 88 (257)
T PRK07067 84 LFNNA 88 (257)
T ss_pred EEECC
Confidence 66543
No 454
>PRK05884 short chain dehydrogenase; Provisional
Probab=51.96 E-value=1.1e+02 Score=27.35 Aligned_cols=71 Identities=21% Similarity=0.172 Sum_probs=38.7
Q ss_pred EEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc---cCCcEEEec
Q 013883 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS---KNTRAILMN 249 (434)
Q Consensus 173 i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~---~~~~~i~~~ 249 (434)
+++|.|+...-..+...+.+.|..|++....-.......+..+... +..|- -|.+.++++++ .+...++.+
T Consensus 3 vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~D~----~~~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 3 VLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDA--IVCDN----TDPASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred EEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcE--EecCC----CCHHHHHHHHHHHhhcCcEEEEC
Confidence 6677666666666777788888887776554433333444444443 33332 13455554443 244555543
No 455
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=51.94 E-value=52 Score=31.46 Aligned_cols=96 Identities=20% Similarity=0.224 Sum_probs=60.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEec-
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMN- 249 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~- 249 (434)
.|++|.|+-=....+...|++.|-.|++.+.--.++...+...-.+.+.-.+ .|-+.|.+.+.+ ++.+|++-
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi------~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDL------LDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEecc------ccHHHHHHHHHhcCCCEEEECc
Confidence 4888888777778888888899977777766666666555443233433333 366777777765 56666542
Q ss_pred ----------CC-----CCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 250 ----------TP-----HNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 250 ----------~p-----~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
.| ||-.|. ..|++.|+++++.=|+
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gT-------l~Ll~am~~~gv~~~v 114 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGT-------LNLIEAMLQTGVKKFI 114 (329)
T ss_pred cccccchhhhCHHHHHhhchHhH-------HHHHHHHHHhCCCEEE
Confidence 22 344443 2377788888765443
No 456
>PRK05867 short chain dehydrogenase; Provisional
Probab=51.76 E-value=1.9e+02 Score=26.29 Aligned_cols=94 Identities=15% Similarity=0.171 Sum_probs=49.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH---HHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL---SMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|.+|++..-.-....... ...|.++..+..|-. |.+.+++++.. +
T Consensus 11 ~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 11 RALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVS----QHQQVTSMLDQVTAELGG 86 (253)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCC----CHHHHHHHHHHHHHHhCC
Confidence 5777777666667777778888988887654433333332 234556666655531 34555444432 4
Q ss_pred CcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
..+++.+......+ ...+.++++++.+
T Consensus 87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~ 115 (253)
T PRK05867 87 IDIAVCNAGIITVTPMLDMPLEEFQRLQN 115 (253)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 55665543211111 1235566655443
No 457
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=51.22 E-value=41 Score=32.96 Aligned_cols=7 Identities=29% Similarity=0.743 Sum_probs=3.3
Q ss_pred CcEEEEc
Q 013883 275 DVLVFSD 281 (434)
Q Consensus 275 ~~~iI~D 281 (434)
+.+++-|
T Consensus 94 Daviv~D 100 (347)
T COG0826 94 DAVIVAD 100 (347)
T ss_pred CEEEEcC
Confidence 4444444
No 458
>PRK06500 short chain dehydrogenase; Provisional
Probab=51.12 E-value=1.3e+02 Score=27.22 Aligned_cols=53 Identities=19% Similarity=0.126 Sum_probs=34.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR 224 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~ 224 (434)
.+++|.++...-..+...+.+.|..|++..-.-..........|.++..+..+
T Consensus 8 ~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D 60 (249)
T PRK06500 8 TALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRAD 60 (249)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEec
Confidence 57777666666666777788888887776544333444444556666666655
No 459
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=51.07 E-value=1.8e+02 Score=28.77 Aligned_cols=84 Identities=8% Similarity=0.049 Sum_probs=50.2
Q ss_pred cEEEcCChHHHHHHHHHHc-cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecC
Q 013883 172 EVTVTSGCTEAIAATILGL-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNT 250 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~ 250 (434)
.|+-.+++..++.+++.+- ..-.-.|++++-.-..-...++.+|++++.++-.. +..-.++..++...+++..++++.
T Consensus 113 ~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~-~~~~~~~~a~~l~~~~~~~~~~~q 191 (368)
T PLN02556 113 TLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDPTK-GMGGTVKKAYELLESTPDAFMLQQ 191 (368)
T ss_pred EEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCC-CccHHHHHHHHHHHhcCCCCccCC
Confidence 4666777788877776553 23334566666666667788999999999876321 211234444444444444555443
Q ss_pred CCCCcc
Q 013883 251 PHNPTG 256 (434)
Q Consensus 251 p~NPTG 256 (434)
-+||.+
T Consensus 192 ~~np~~ 197 (368)
T PLN02556 192 FSNPAN 197 (368)
T ss_pred CCCHHH
Confidence 456654
No 460
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=51.02 E-value=1.8e+02 Score=26.48 Aligned_cols=64 Identities=17% Similarity=0.183 Sum_probs=38.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCc-hhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFY-DSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI 239 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i 239 (434)
.+++|.|+......+...|.+.|-+|++....- ......++..|.++..+..|-. |.+.+++++
T Consensus 10 ~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----~~~~~~~~~ 74 (251)
T PRK12481 10 VAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLI----QQKDIDSIV 74 (251)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCC----CHHHHHHHH
Confidence 567777777667777778889998887754321 1122334445667766665531 345555444
No 461
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=50.82 E-value=27 Score=34.28 Aligned_cols=65 Identities=9% Similarity=0.135 Sum_probs=42.1
Q ss_pred HHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 207 YEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 207 ~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+.+.+..++.++...-+.+ ++|.+.++.+.++-..+ ....|-.++++++++|++.|++++|-||-
T Consensus 23 ~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g---------a~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 23 TIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG---------AYSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred HHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc---------CcCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 4455666788887776653 34555444433322111 11235678999999999999999998884
No 462
>PRK08339 short chain dehydrogenase; Provisional
Probab=50.53 E-value=2.1e+02 Score=26.39 Aligned_cols=93 Identities=14% Similarity=0.173 Sum_probs=48.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEcCCCCCCCCHHHHHhhccc-----C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM----AGAKIKCITLRPPDFAIPIEELKSTISK-----N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~-----~ 242 (434)
.+++|.|+...-..+...|.+.|.+|++.+-.-.......+. .+.++..+..|-. |.+.+++.+.. +
T Consensus 10 ~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 10 LAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLT----KREDLERTVKELKNIGE 85 (263)
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC----CHHHHHHHHHHHHhhCC
Confidence 566666666666667777888898888765443333332222 2555555555431 33444444332 3
Q ss_pred CcEEEecCCCCC-cc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNP-TG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NP-TG--~~~~~e~l~~i~~ 269 (434)
...++. +..-+ .+ ...+.++|++..+
T Consensus 86 iD~lv~-nag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T PRK08339 86 PDIFFF-STGGPKPGYFMEMSMEDWEGAVK 114 (263)
T ss_pred CcEEEE-CCCCCCCCCcccCCHHHHHHHHH
Confidence 444443 33111 11 1346677766443
No 463
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=50.32 E-value=1e+02 Score=29.58 Aligned_cols=56 Identities=11% Similarity=0.132 Sum_probs=37.0
Q ss_pred CCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcC
Q 013883 228 FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVY 284 (434)
Q Consensus 228 ~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay 284 (434)
..+|.+.+.+.+.....+-++..+..+ +..++.+.++++.+..+++-=++|+|..-
T Consensus 159 ~~~~~~~l~~~~~~~~~l~vl~~~~~~-~~~~~~~~l~~~l~~l~~~~D~VIID~p~ 214 (322)
T TIGR03815 159 GRLPAGALRDALPRRGGLSVLSWGRAV-GAALPPAAVRAVLDAARRGGDLVVVDLPR 214 (322)
T ss_pred CCcCHHHHHHhCCCcCCeEEEecCCCC-cCCCCHHHHHHHHHHHHhcCCEEEEeCCC
Confidence 345666777666544445566655443 34467788888888777766688888864
No 464
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=49.71 E-value=34 Score=30.93 Aligned_cols=91 Identities=11% Similarity=0.187 Sum_probs=54.6
Q ss_pred HHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccc-cCCCCccccCCCCCCCceEEEc
Q 013883 232 IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA-FEMDHISIASLPGMYERTVTMN 310 (434)
Q Consensus 232 ~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~-~~~~~~~~~~~~~~~~~~i~i~ 310 (434)
++.++++++.+..++-+=.-+..+-.. .+..+++.++|++|++.+|+++-...-. .+.+...+.. ...-+.
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGVHlGq------~D~~~~ 95 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRVDLALAVGADGVHLGQ------DDMPLA 95 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEEEcCC------cccchH
Confidence 788899998887777664443333222 5567899999999999999988543211 1112222111 112233
Q ss_pred cCChhhccccceeeeEEeChh
Q 013883 311 SLGKTFSLTGWKIGWAIAPPH 331 (434)
Q Consensus 311 S~SK~~g~~G~R~G~~~~~~~ 331 (434)
-..|.++ ++..+|+-+-+.+
T Consensus 96 ~ar~~~~-~~~iIG~S~h~~e 115 (211)
T COG0352 96 EARELLG-PGLIIGLSTHDLE 115 (211)
T ss_pred HHHHhcC-CCCEEEeecCCHH
Confidence 3446666 7777887555433
No 465
>PRK06182 short chain dehydrogenase; Validated
Probab=49.63 E-value=1.5e+02 Score=27.33 Aligned_cols=89 Identities=17% Similarity=0.091 Sum_probs=45.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...+.+.|..|++..-.-...... ...+...+...+. |.+.+++.+.. +...
T Consensus 5 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~-~~~~~~~~~~Dv~------~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 5 VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-ASLGVHPLSLDVT------DEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhCCCeEEEeeCC------CHHHHHHHHHHHHHhcCCCCE
Confidence 567766666666666777788898888765443322222 2234554444433 44555554431 4566
Q ss_pred EEecCCCCCccc--CCCHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVI 267 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i 267 (434)
++.+....+.|. ..+.++++++
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~ 101 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQ 101 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHH
Confidence 665443333332 2244444443
No 466
>PRK06139 short chain dehydrogenase; Provisional
Probab=49.40 E-value=2.1e+02 Score=27.67 Aligned_cols=94 Identities=15% Similarity=0.146 Sum_probs=50.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhcc------cC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTIS------KN 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~------~~ 242 (434)
.+++|.++...-..+...+.+.|.+|++..-.-...... ++..|.++..++.|-. |.+.+++++. .+
T Consensus 9 ~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 9 VVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVT----DADQVKALATQAASFGGR 84 (330)
T ss_pred EEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC----CHHHHHHHHHHHHHhcCC
Confidence 566666656666666777888898888765443333322 3345777766665531 4455555442 13
Q ss_pred CcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
...++.+.-....|. ..+.++++++.+
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~ 113 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQ 113 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 455554432222222 235566655554
No 467
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=49.30 E-value=2.1e+02 Score=28.78 Aligned_cols=92 Identities=17% Similarity=0.162 Sum_probs=48.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTP 251 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p 251 (434)
.+++|.|+......+...+.+.|.+|++.+-.-..........+.++..+..|-. |.+.+++.+. +..+++.+..
T Consensus 180 ~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvs----d~~~v~~~l~-~IDiLInnAG 254 (406)
T PRK07424 180 TVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVG----QEAALAELLE-KVDILIINHG 254 (406)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCC----CHHHHHHHhC-CCCEEEECCC
Confidence 6777766666666667778888888776543222222222222223333333321 4566666554 4666666544
Q ss_pred CCCcccCCCHHHHHHHHH
Q 013883 252 HNPTGKMFTREELNVIAS 269 (434)
Q Consensus 252 ~NPTG~~~~~e~l~~i~~ 269 (434)
.++.+ ..+.|++++..+
T Consensus 255 i~~~~-~~s~e~~~~~~~ 271 (406)
T PRK07424 255 INVHG-ERTPEAINKSYE 271 (406)
T ss_pred cCCCC-CCCHHHHHHHHH
Confidence 44443 356666666544
No 468
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=49.22 E-value=2.9e+02 Score=27.78 Aligned_cols=110 Identities=20% Similarity=0.257 Sum_probs=65.7
Q ss_pred HHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCC-CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCH
Q 013883 154 AIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPG-DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPI 232 (434)
Q Consensus 154 ~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~ 232 (434)
+..++..+.+|- +...+-++++.| +...++...|...| ..|++.+-++.--..+++.+|+++. .+
T Consensus 164 aAv~lA~~~~~~-L~~~~vlvIGAG--em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-----------~l 229 (414)
T COG0373 164 AAVELAKRIFGS-LKDKKVLVIGAG--EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-----------AL 229 (414)
T ss_pred HHHHHHHHHhcc-cccCeEEEEccc--HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-----------cH
Confidence 334444444442 223323444555 55566677888888 8899999999999999999996554 24
Q ss_pred HHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCc
Q 013883 233 EELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEV 283 (434)
Q Consensus 233 ~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Dea 283 (434)
+++.+.+.+ ..+|+.++ .-|+ .+++.+.++...+ .+++ .+|+|=+
T Consensus 230 ~el~~~l~~-~DvVissT-sa~~-~ii~~~~ve~a~~--~r~~-~livDia 274 (414)
T COG0373 230 EELLEALAE-ADVVISST-SAPH-PIITREMVERALK--IRKR-LLIVDIA 274 (414)
T ss_pred HHHHHhhhh-CCEEEEec-CCCc-cccCHHHHHHHHh--cccC-eEEEEec
Confidence 556665543 45555431 2222 2456777766654 2223 7888753
No 469
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=49.13 E-value=1.2e+02 Score=25.27 Aligned_cols=95 Identities=22% Similarity=0.225 Sum_probs=55.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCC-eEEEcCCC--chhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGD-EVILFAPF--YDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK---- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd-~Vlv~~p~--y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~---- 241 (434)
.+++|.|+...-..+.+.+++.|+ .|++.... ....... +...+.++..++.|-. |.+.+++.++.
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~ 77 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLS----DPESIRALIEEVIKR 77 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETT----SHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccc----ccccccccccccccc
Confidence 467777777766777778887765 55555544 3444333 4556788888887632 45666655543
Q ss_pred --CCcEEEecCCCCCccc--CCCHHHHHHHHHH
Q 013883 242 --NTRAILMNTPHNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 242 --~~~~i~~~~p~NPTG~--~~~~e~l~~i~~l 270 (434)
....++.+....+.+. ..+.+++++..+.
T Consensus 78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhhhhcccc
Confidence 3455555544333333 3345666666553
No 470
>PRK05872 short chain dehydrogenase; Provisional
Probab=49.13 E-value=2.1e+02 Score=26.90 Aligned_cols=93 Identities=12% Similarity=0.120 Sum_probs=51.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcC--CEEEEEEcCCCCCCCCHHHHHhhccc------CC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAG--AKIKCITLRPPDFAIPIEELKSTISK------NT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G--~~~~~v~~~~~~~~~d~~~l~~~i~~------~~ 243 (434)
.+++|.|+...-..+...+.+.|.+|++..-.-.......+..+ .++..+..|-. |.+.+++++.. +.
T Consensus 11 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 11 VVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVT----DLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCC----CHHHHHHHHHHHHHHcCCC
Confidence 67777776666677777788889888877655444444444443 44555444421 45555554432 34
Q ss_pred cEEEecCCCCCccc--CCCHHHHHHHH
Q 013883 244 RAILMNTPHNPTGK--MFTREELNVIA 268 (434)
Q Consensus 244 ~~i~~~~p~NPTG~--~~~~e~l~~i~ 268 (434)
.+++.+.-....+. ..+.+++++..
T Consensus 87 d~vI~nAG~~~~~~~~~~~~~~~~~~~ 113 (296)
T PRK05872 87 DVVVANAGIASGGSVAQVDPDAFRRVI 113 (296)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHH
Confidence 55554432222221 24566666554
No 471
>PRK11761 cysM cysteine synthase B; Provisional
Probab=48.75 E-value=2.3e+02 Score=26.97 Aligned_cols=52 Identities=13% Similarity=0.169 Sum_probs=37.5
Q ss_pred cEEEcCChHHHHHHHHHHcc-CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEc
Q 013883 172 EVTVTSGCTEAIAATILGLI-NPGDEVILFAPFYDSYEATLSMAGAKIKCITL 223 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 223 (434)
.|+..+++..+..++..+-. .-.-.|++++-.-..-...++.+|++++.++-
T Consensus 65 ~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 65 TLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred EEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 68888888888887766543 32345666655555677888999999999874
No 472
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=48.66 E-value=1.4e+02 Score=23.75 Aligned_cols=68 Identities=18% Similarity=0.243 Sum_probs=37.3
Q ss_pred HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 211 LSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 211 ~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
++..|+++..+.-.++++ + ..+.+.+.+ +..-++++.|. +.-.....++-..|.+.|.+++++++.+-
T Consensus 38 L~~~Gi~~~~v~~~~~~g--~-~~i~~~i~~~g~idlVIn~~~-~~~~~~~~~dg~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 38 LADAGIPVRAVSKRHEDG--E-PTVDAAIAEKGKFDVVINLRD-PRRDRCTDEDGTALLRLARLYKIPVTTPN 106 (112)
T ss_pred HHHcCCceEEEEecCCCC--C-cHHHHHHhCCCCEEEEEEcCC-CCcccccCCChHHHHHHHHHcCCCEEECH
Confidence 344677776664332212 2 234555555 44445555553 11100123346678889999999999864
No 473
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=47.89 E-value=2.1e+02 Score=25.79 Aligned_cols=22 Identities=5% Similarity=0.052 Sum_probs=18.7
Q ss_pred CCHHHHHHHHHHHHHcCcEEEE
Q 013883 259 FTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 259 ~~~e~l~~i~~la~~~~~~iI~ 280 (434)
.+.++++++.++++++|+.+++
T Consensus 190 ~~~~~l~~~~~~~~~~gl~~~i 211 (213)
T PRK10076 190 PSSADVATMREMAERAGFQVTV 211 (213)
T ss_pred cCHHHHHHHHHHHHHcCCeEEe
Confidence 5788899999999999887764
No 474
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=47.78 E-value=69 Score=30.39 Aligned_cols=54 Identities=13% Similarity=0.140 Sum_probs=34.0
Q ss_pred CCCCCCHHHHHhhccc----CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTISK----NTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~~----~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++. +...|+++ -++--+..++.||++++++.+.+. ++.||.
T Consensus 14 ~dg~iD~~~l~~l~~~l~~~Gv~gi~v~-GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 14 ADGSFDEDAYRAHVEWLLSYGAAALFAA-GGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEEC-cCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 3567888887776643 56666653 234445577888888888766553 455554
No 475
>PLN02565 cysteine synthase
Probab=46.43 E-value=2.5e+02 Score=27.14 Aligned_cols=81 Identities=10% Similarity=0.036 Sum_probs=47.7
Q ss_pred CCCCCCCcHHHHHHHHHHHHhh-cCCCCCCC-CcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCCCchhHHHHHHHcCCE
Q 013883 141 QYARGHGVPEFNSAIASRFKKD-SGLEVDPE-KEVTVTSGCTEAIAATILGL-INPGDEVILFAPFYDSYEATLSMAGAK 217 (434)
Q Consensus 141 ~Y~~~~G~~~lr~~ia~~l~~~-~g~~~~~~-~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~ 217 (434)
+|..+.|.-..|-+..-+.... .|. +.+. ..|+-.+++..++.++..+- +.-.-.|+++.-.-..-...++.+|++
T Consensus 37 E~~nPtGSfKdR~A~~~l~~~~~~g~-~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~ 115 (322)
T PLN02565 37 EMMEPCSSVKDRIGYSMITDAEEKGL-IKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAE 115 (322)
T ss_pred cccCCccchHHHHHHHHHHHHHHcCC-CCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCE
Confidence 3434446555665544433222 232 2222 23666677787777665543 333345666766677778889999999
Q ss_pred EEEEE
Q 013883 218 IKCIT 222 (434)
Q Consensus 218 ~~~v~ 222 (434)
++.++
T Consensus 116 V~~~~ 120 (322)
T PLN02565 116 LVLTD 120 (322)
T ss_pred EEEeC
Confidence 98874
No 476
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=46.13 E-value=1.8e+02 Score=29.43 Aligned_cols=76 Identities=14% Similarity=0.119 Sum_probs=46.3
Q ss_pred CcHHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEc
Q 013883 147 GVPEFNSAIASRFKKD-SGLEVDPEKEVTVTSGCTEAIAATILGL-INPGDEVILFAPFYDSYEATLSMAGAKIKCITL 223 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~-~g~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 223 (434)
|--..|.+..-..... .|. +.+.+.|+..+++..+..++..+- +.-.-.|+++...-..-...++.+|++++.++-
T Consensus 39 GS~K~R~a~~~l~~a~~~g~-~~~g~~vv~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 39 GSVKDRIALRMIEDAEASGR-LKPGDTIIEPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred cchHHHHHHHHHHHHHHcCC-CCCCCEEEEeCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 5455665543333222 232 223235777788888887776554 333345666666656667788999999998874
No 477
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=46.12 E-value=2.2e+02 Score=25.53 Aligned_cols=76 Identities=9% Similarity=0.101 Sum_probs=42.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHc--CCEEEEEEcCCCCCCCCHHHHHhhccc------CC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA--GAKIKCITLRPPDFAIPIEELKSTISK------NT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~--G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~ 243 (434)
.++++.|+...-..+...+++.|.+|++..-.-.......... +.++..+..|- .|.+.+++++.. +.
T Consensus 7 ~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~----~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 7 VAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV----SDEADVEAAVAAALERFGSV 82 (251)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCC----CCHHHHHHHHHHHHHHhCCC
Confidence 5777766666666677778888877776654433333333322 34555555542 245556554432 45
Q ss_pred cEEEecCC
Q 013883 244 RAILMNTP 251 (434)
Q Consensus 244 ~~i~~~~p 251 (434)
.+|+.+..
T Consensus 83 d~vi~~ag 90 (251)
T PRK07231 83 DILVNNAG 90 (251)
T ss_pred CEEEECCC
Confidence 66766543
No 478
>PRK05876 short chain dehydrogenase; Provisional
Probab=46.11 E-value=2.5e+02 Score=26.08 Aligned_cols=93 Identities=15% Similarity=0.125 Sum_probs=50.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|...|..|++.+-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 8 ~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 8 GAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR----HREEVTHLADEAFRLLGH 83 (275)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCC----CHHHHHHHHHHHHHHcCC
Confidence 577777776666777777888898887765433333332 2234666666666531 34555554432 3
Q ss_pred CcEEEecCCCCCcc--cCCCHHHHHHHH
Q 013883 243 TRAILMNTPHNPTG--KMFTREELNVIA 268 (434)
Q Consensus 243 ~~~i~~~~p~NPTG--~~~~~e~l~~i~ 268 (434)
..+++.+......| ...+.++++++.
T Consensus 84 id~li~nAg~~~~~~~~~~~~~~~~~~~ 111 (275)
T PRK05876 84 VDVVFSNAGIVVGGPIVEMTHDDWRWVI 111 (275)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHH
Confidence 45555433221112 234566665443
No 479
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=45.58 E-value=90 Score=28.97 Aligned_cols=91 Identities=13% Similarity=0.144 Sum_probs=56.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCC-chhHHHHHHHcCCEEEEEEcCCCCCCC-CHHHHHhhccc-CCcEEEe
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPF-YDSYEATLSMAGAKIKCITLRPPDFAI-PIEELKSTISK-NTRAILM 248 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~-y~~~~~~~~~~G~~~~~v~~~~~~~~~-d~~~l~~~i~~-~~~~i~~ 248 (434)
.|++-.|++++-.++ ..+.+.|..|++.--+ |.. ....+.++. .+.+ |.++|++.+++ +.++|+
T Consensus 4 ~IlvlgGT~egr~la-~~L~~~g~~v~~Svat~~g~----~~~~~~~v~-------~G~l~~~~~l~~~l~~~~i~~VI- 70 (248)
T PRK08057 4 RILLLGGTSEARALA-RALAAAGVDIVLSLAGRTGG----PADLPGPVR-------VGGFGGAEGLAAYLREEGIDLVI- 70 (248)
T ss_pred eEEEEechHHHHHHH-HHHHhCCCeEEEEEccCCCC----cccCCceEE-------ECCCCCHHHHHHHHHHCCCCEEE-
Confidence 689999999998854 3455567666654332 333 222333332 3556 88999999976 456665
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 249 NTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 249 ~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
...+|.-..+ =+.+.+.|++.|+..|=
T Consensus 71 -DATHPfA~~i----s~~a~~ac~~~~ipyiR 97 (248)
T PRK08057 71 -DATHPYAAQI----SANAAAACRALGIPYLR 97 (248)
T ss_pred -ECCCccHHHH----HHHHHHHHHHhCCcEEE
Confidence 3455554433 34567788888887763
No 480
>PRK08263 short chain dehydrogenase; Provisional
Probab=45.53 E-value=2.1e+02 Score=26.47 Aligned_cols=91 Identities=13% Similarity=0.049 Sum_probs=47.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...+.+.|..|++..-.-..........+..+..+..|-. |.+.+++.+.. +..+
T Consensus 5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVT----DRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 5677766666666667777888887776554333333333434444555554421 34444444332 4556
Q ss_pred EEecCCCCCccc--CCCHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNV 266 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~ 266 (434)
++++.-....+. ..+.+++++
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~ 103 (275)
T PRK08263 81 VVNNAGYGLFGMIEEVTESEARA 103 (275)
T ss_pred EEECCCCccccccccCCHHHHHH
Confidence 665533222222 234555554
No 481
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=45.35 E-value=2.3e+02 Score=25.74 Aligned_cols=74 Identities=15% Similarity=0.196 Sum_probs=42.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCch--hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYD--SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~--~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~ 243 (434)
.+++|.|+...-..+.+.+.+.|-.|++..-.-. .....+...+.++..+..|-. |.+.+++.+.. +.
T Consensus 17 ~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 17 VAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLT----KPESAEKVVKEALEEFGKI 92 (258)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCC----CHHHHHHHHHHHHHHcCCC
Confidence 6777777777777777788888988776543311 122233344556666665531 34444444331 45
Q ss_pred cEEEec
Q 013883 244 RAILMN 249 (434)
Q Consensus 244 ~~i~~~ 249 (434)
..++++
T Consensus 93 d~li~~ 98 (258)
T PRK06935 93 DILVNN 98 (258)
T ss_pred CEEEEC
Confidence 666654
No 482
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=45.26 E-value=84 Score=29.92 Aligned_cols=47 Identities=11% Similarity=0.079 Sum_probs=27.8
Q ss_pred CCCCCCHHHHHhhccc----CCcEEEecCCCCCcccCCCHHHHHHHHHHHHH
Q 013883 226 PDFAIPIEELKSTISK----NTRAILMNTPHNPTGKMFTREELNVIASLCIE 273 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~~----~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~ 273 (434)
+++.+|.+.+++.++. +.+.|+++ -++-=+..++.+|++++++.+.+
T Consensus 19 ~dg~iD~~~l~~li~~l~~~Gv~gi~v~-GstGE~~~Lt~eEr~~v~~~~~~ 69 (296)
T TIGR03249 19 ADGSFDEAAYRENIEWLLGYGLEALFAA-GGTGEFFSLTPAEYEQVVEIAVS 69 (296)
T ss_pred CCCCcCHHHHHHHHHHHHhcCCCEEEEC-CCCcCcccCCHHHHHHHHHHHHH
Confidence 3567777777765543 55666542 23333446677777777776554
No 483
>PRK07478 short chain dehydrogenase; Provisional
Probab=45.22 E-value=2.4e+02 Score=25.58 Aligned_cols=94 Identities=11% Similarity=0.025 Sum_probs=50.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...+.+.|.+|++..-.-...... +...|.++..++.|-. |.+.+++++.. +
T Consensus 8 ~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 8 VAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVR----DEAYAKALVALAVERFGG 83 (254)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC----CHHHHHHHHHHHHHhcCC
Confidence 566776666556666777888898887765433333322 2334556666665531 44555544432 4
Q ss_pred CcEEEecCCCC-Ccc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHN-PTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~N-PTG--~~~~~e~l~~i~~ 269 (434)
...++.+.... +.+ ...+.+++++..+
T Consensus 84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 113 (254)
T PRK07478 84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLA 113 (254)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 55665543221 212 1345566665543
No 484
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=44.90 E-value=1e+02 Score=28.81 Aligned_cols=88 Identities=10% Similarity=0.073 Sum_probs=46.8
Q ss_pred EEEcCChHHHHHHHHHHccCCCCeEEEc--CCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc-----cC-Cc
Q 013883 173 VTVTSGCTEAIAATILGLINPGDEVILF--APFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS-----KN-TR 244 (434)
Q Consensus 173 i~~t~G~~~ai~~~~~~l~~~gd~Vlv~--~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-----~~-~~ 244 (434)
|+++.++......++..|++.|.+|.+. +|.-. ...|.+++...+ .|.+.+.++++ .+ ..
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~------~~~~~~~~~~d~------~d~~~l~~a~~~~~~~~g~~d 69 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS------AGPNEKHVKFDW------LDEDTWDNPFSSDDGMEPEIS 69 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc------cCCCCccccccC------CCHHHHHHHHhcccCcCCcee
Confidence 5555554444455566677777655543 22211 112333333222 26777877774 23 56
Q ss_pred EEEecCCCCCcccCCCHHHHHHHHHHHHHcCc
Q 013883 245 AILMNTPHNPTGKMFTREELNVIASLCIENDV 276 (434)
Q Consensus 245 ~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~ 276 (434)
.++++.|..+ -..+..+.+++.|++.|+
T Consensus 70 ~v~~~~~~~~----~~~~~~~~~i~aa~~~gv 97 (285)
T TIGR03649 70 AVYLVAPPIP----DLAPPMIKFIDFARSKGV 97 (285)
T ss_pred EEEEeCCCCC----ChhHHHHHHHHHHHHcCC
Confidence 6666655322 112456778888888876
No 485
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=44.27 E-value=1.1e+02 Score=29.82 Aligned_cols=111 Identities=15% Similarity=0.067 Sum_probs=58.7
Q ss_pred cEEEcCChHHHHHHHHHHccC--CCCeEEEcCCCchhHHHHHHH---cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEE
Q 013883 172 EVTVTSGCTEAIAATILGLIN--PGDEVILFAPFYDSYEATLSM---AGAKIKCITLRPPDFAIPIEELKSTISKNTRAI 246 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i 246 (434)
.+.+..|..+.-.--+..++. +|-.+++.+..+......++. ..-..-.+++- .+.-.+.+..++++..+..+|
T Consensus 98 ~~~vavG~~~~d~er~~~L~~~~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vI-aGNV~T~e~a~~Li~aGAD~v 176 (346)
T PRK05096 98 HVMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTIC-AGNVVTGEMVEELILSGADIV 176 (346)
T ss_pred eEEEEecCCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEE-EecccCHHHHHHHHHcCCCEE
Confidence 566666666544444555544 464455555555433222221 11110000000 123346777777777666665
Q ss_pred E-------ecCCCCCcccCCCHHH-HHHHHHHHHHcCcEEEEcCc
Q 013883 247 L-------MNTPHNPTGKMFTREE-LNVIASLCIENDVLVFSDEV 283 (434)
Q Consensus 247 ~-------~~~p~NPTG~~~~~e~-l~~i~~la~~~~~~iI~Dea 283 (434)
- +|.-.-.||+-.|+-. +.+.++.++++++.||.|.=
T Consensus 177 KVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGG 221 (346)
T PRK05096 177 KVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGG 221 (346)
T ss_pred EEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCC
Confidence 3 3444567777666322 55555677788999999974
No 486
>PRK07825 short chain dehydrogenase; Provisional
Probab=44.03 E-value=2.5e+02 Score=25.84 Aligned_cols=44 Identities=23% Similarity=0.080 Sum_probs=25.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAG 215 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G 215 (434)
.+++|.|+...-..+...+.+.|-.|++..-.-..........+
T Consensus 7 ~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (273)
T PRK07825 7 VVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG 50 (273)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 56776665555566667777888777776543333333333333
No 487
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=44.00 E-value=79 Score=29.36 Aligned_cols=94 Identities=17% Similarity=0.150 Sum_probs=56.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH-cCCEEEEEEcCCCCCCC-CHHHHHhhccc-CCcEEEe
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM-AGAKIKCITLRPPDFAI-PIEELKSTISK-NTRAILM 248 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~G~~~~~v~~~~~~~~~-d~~~l~~~i~~-~~~~i~~ 248 (434)
+|++-.|++++-.+ ...+.+.|. |++.--+-.+-...-.. .+.++. .+.+ |.++|++.+++ +.++|+
T Consensus 2 ~ILvlgGTtE~r~l-a~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~-------~G~lg~~~~l~~~l~~~~i~~vI- 71 (249)
T PF02571_consen 2 KILVLGGTTEGRKL-AERLAEAGY-VIVSVATSYGGELLKPELPGLEVR-------VGRLGDEEGLAEFLRENGIDAVI- 71 (249)
T ss_pred EEEEEechHHHHHH-HHHHHhcCC-EEEEEEhhhhHhhhccccCCceEE-------ECCCCCHHHHHHHHHhCCCcEEE-
Confidence 58899999999884 455667777 55543322221111011 122222 3455 89999999976 455555
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 249 NTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 249 ~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
...+|.-..+ =+.+.+.|++.|+..+-
T Consensus 72 -DATHPfA~~i----s~na~~a~~~~~ipylR 98 (249)
T PF02571_consen 72 -DATHPFAAEI----SQNAIEACRELGIPYLR 98 (249)
T ss_pred -ECCCchHHHH----HHHHHHHHhhcCcceEE
Confidence 4555655444 34567789999988773
No 488
>PF05621 TniB: Bacterial TniB protein; InterPro: IPR008868 This family consists of several bacterial TniB NTP-binding proteins. TniB is a probable ATP-binding protein [] which is involved in Tn5053 mercury resistance transposition [].
Probab=43.90 E-value=2e+02 Score=27.59 Aligned_cols=176 Identities=22% Similarity=0.220 Sum_probs=92.4
Q ss_pred CChHHHHHHHHHHcc---CCC----CeEEEcCCCchh----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHH----hhccc
Q 013883 177 SGCTEAIAATILGLI---NPG----DEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELK----STISK 241 (434)
Q Consensus 177 ~G~~~ai~~~~~~l~---~~g----d~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~----~~i~~ 241 (434)
+|=|..+..+....- +++ ..|++..|.-+. |..++..+|+.... +. ..+.++ ..++.
T Consensus 72 nGKT~Ii~rF~~~hp~~~d~~~~~~PVv~vq~P~~p~~~~~Y~~IL~~lgaP~~~------~~--~~~~~~~~~~~llr~ 143 (302)
T PF05621_consen 72 NGKTMIIERFRRLHPPQSDEDAERIPVVYVQMPPEPDERRFYSAILEALGAPYRP------RD--RVAKLEQQVLRLLRR 143 (302)
T ss_pred CcHHHHHHHHHHHCCCCCCCCCccccEEEEecCCCCChHHHHHHHHHHhCcccCC------CC--CHHHHHHHHHHHHHH
Confidence 555555555554431 111 245666665544 66778888875432 11 223333 33333
Q ss_pred -CCcEEEecCCCC-CcccCCCHHH-HHHHHHHHHHcCcEEE---EcCcCCccccCCC---CccccCCCCCC---CceEEE
Q 013883 242 -NTRAILMNTPHN-PTGKMFTREE-LNVIASLCIENDVLVF---SDEVYDKLAFEMD---HISIASLPGMY---ERTVTM 309 (434)
Q Consensus 242 -~~~~i~~~~p~N-PTG~~~~~e~-l~~i~~la~~~~~~iI---~Deay~~~~~~~~---~~~~~~~~~~~---~~~i~i 309 (434)
+++++++-..|| -+|..--+.+ +..|-.++.+.++.+| .+|+|..+.-+.. ......++.+. +---.+
T Consensus 144 ~~vrmLIIDE~H~lLaGs~~~qr~~Ln~LK~L~NeL~ipiV~vGt~~A~~al~~D~QLa~RF~~~~Lp~W~~d~ef~~LL 223 (302)
T PF05621_consen 144 LGVRMLIIDEFHNLLAGSYRKQREFLNALKFLGNELQIPIVGVGTREAYRALRTDPQLASRFEPFELPRWELDEEFRRLL 223 (302)
T ss_pred cCCcEEEeechHHHhcccHHHHHHHHHHHHHHhhccCCCeEEeccHHHHHHhccCHHHHhccCCccCCCCCCCcHHHHHH
Confidence 899999988899 4776554444 5666667888888888 3555555443321 11112222211 101123
Q ss_pred ccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCCh
Q 013883 310 NSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPE 363 (434)
Q Consensus 310 ~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~ 363 (434)
.||-+.+-+. ----...+++...+.............+...++..+++++.
T Consensus 224 ~s~e~~LPLr---~~S~l~~~~la~~i~~~s~G~iG~l~~ll~~aA~~AI~sG~ 274 (302)
T PF05621_consen 224 ASFERALPLR---KPSNLASPELARRIHERSEGLIGELSRLLNAAAIAAIRSGE 274 (302)
T ss_pred HHHHHhCCCC---CCCCCCCHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhcCC
Confidence 4555554321 11113445666666555544445555666777777777764
No 489
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=43.84 E-value=2.4e+02 Score=26.70 Aligned_cols=77 Identities=13% Similarity=0.200 Sum_probs=47.3
Q ss_pred CCcHHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHHcc-CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEc
Q 013883 146 HGVPEFNSAIASRFKKD-SGLEVDPEKEVTVTSGCTEAIAATILGLI-NPGDEVILFAPFYDSYEATLSMAGAKIKCITL 223 (434)
Q Consensus 146 ~G~~~lr~~ia~~l~~~-~g~~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 223 (434)
.|--..|.+........ .|. +.+.+.|+..+++..+..++..+-. +-.-.|+++...-..-...++.+|++++.++-
T Consensus 35 tGS~K~R~a~~~v~~a~~~g~-~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 35 AGSVKDRPALSMIVEAEKRGE-IKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred CccHHHHHHHHHHHHHHHcCC-CCCCCEEEEECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 35555665554443322 232 2233357777888888877765542 33345666665566677889999999998864
No 490
>PRK08589 short chain dehydrogenase; Validated
Probab=43.59 E-value=2.7e+02 Score=25.71 Aligned_cols=52 Identities=19% Similarity=0.217 Sum_probs=33.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH---HHcCCEEEEEEcC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL---SMAGAKIKCITLR 224 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~ 224 (434)
.+++|.|+...-..+...|.+.|..|++.... ....... ...+.++..+..|
T Consensus 8 ~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~D 62 (272)
T PRK08589 8 VAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVD 62 (272)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEee
Confidence 56777766666666777888889888877655 4433332 2335566666655
No 491
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=43.38 E-value=66 Score=30.24 Aligned_cols=46 Identities=13% Similarity=0.210 Sum_probs=26.9
Q ss_pred CCCCCHHHHHhhccc----CCcEEEecCCCCCcccCCCHHHHHHHHHHHHH
Q 013883 227 DFAIPIEELKSTISK----NTRAILMNTPHNPTGKMFTREELNVIASLCIE 273 (434)
Q Consensus 227 ~~~~d~~~l~~~i~~----~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~ 273 (434)
++.+|.+.+++.++. +...|+++ -++-=+..++.+|++++++.+.+
T Consensus 12 dg~iD~~~~~~~i~~l~~~Gv~gi~~~-GstGE~~~ls~~Er~~l~~~~~~ 61 (281)
T cd00408 12 DGEVDLDALRRLVEFLIEAGVDGLVVL-GTTGEAPTLTDEERKEVIEAVVE 61 (281)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEEC-CCCcccccCCHHHHHHHHHHHHH
Confidence 566777777765532 55555542 23333456677777777766654
No 492
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=43.31 E-value=89 Score=29.90 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=36.0
Q ss_pred CCCCCCHHHHHhhccc----CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTISK----NTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~~----~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++. +.+.|+++ -++-=+..++.||++++++.+.+. ++.||.
T Consensus 21 ~dg~iD~~~l~~li~~l~~~Gv~Gi~~~-GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 21 ADGSFDEAAYREHLEWLAPYGAAALFAA-GGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEEC-cCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4678898888887643 66777653 223334577888888888877553 455553
No 493
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=43.03 E-value=2.3e+02 Score=26.57 Aligned_cols=96 Identities=20% Similarity=0.275 Sum_probs=51.9
Q ss_pred cEEEcCChHHHH-HHHHHHccCCCCeEEEcCCCchhH----HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccC--Cc
Q 013883 172 EVTVTSGCTEAI-AATILGLINPGDEVILFAPFYDSY----EATLSMAGAKIKCITLRPPDFAIPIEELKSTISKN--TR 244 (434)
Q Consensus 172 ~i~~t~G~~~ai-~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~--~~ 244 (434)
.+++| |++.+| ..+...|.+.|..|++..=.=.-. .++-...|.++..++.|-.+ .-+++.+.+.+..+ ..
T Consensus 8 ~~lIT-GASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~-~~~~~~l~~~l~~~~~~I 85 (265)
T COG0300 8 TALIT-GASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSD-PEALERLEDELKERGGPI 85 (265)
T ss_pred EEEEE-CCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC-hhHHHHHHHHHHhcCCcc
Confidence 45554 445554 455566778887777665554433 33344467777777777421 12456666555554 44
Q ss_pred EEEecCC-CCCcc--cCCCHHHHHHHHH
Q 013883 245 AILMNTP-HNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 245 ~i~~~~p-~NPTG--~~~~~e~l~~i~~ 269 (434)
-++++|. ..-.| ...+.++.+++.+
T Consensus 86 dvLVNNAG~g~~g~f~~~~~~~~~~mi~ 113 (265)
T COG0300 86 DVLVNNAGFGTFGPFLELSLDEEEEMIQ 113 (265)
T ss_pred cEEEECCCcCCccchhhCChHHHHHHHH
Confidence 5666666 23333 2334455555443
No 494
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=42.98 E-value=3e+02 Score=26.75 Aligned_cols=98 Identities=15% Similarity=0.103 Sum_probs=64.6
Q ss_pred HHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC----------CC---------CCCHHHHHhhcccC
Q 013883 182 AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP----------DF---------AIPIEELKSTISKN 242 (434)
Q Consensus 182 ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~----------~~---------~~d~~~l~~~i~~~ 242 (434)
.-..+++...--|-+|.+.+-....-.+.++.+|++..-+-..++ ++ ...++.+.+.++.+
T Consensus 193 LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~ 272 (360)
T KOG0023|consen 193 LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVN 272 (360)
T ss_pred cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccccchHHHHHHhhcC
Confidence 444444443444777887777776677788888888766655221 11 12456666677777
Q ss_pred CcEEEecCCCCCcccCC----------------CHHHHHHHHHHHHHcCcEEE
Q 013883 243 TRAILMNTPHNPTGKMF----------------TREELNVIASLCIENDVLVF 279 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~~~----------------~~e~l~~i~~la~~~~~~iI 279 (434)
-++|++.-|.+|-.... +..+.++..++|.++++..-
T Consensus 273 Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~ik~~ 325 (360)
T KOG0023|consen 273 GTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGLIKSP 325 (360)
T ss_pred CEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCCCcCc
Confidence 88888888876654332 67788999999999876543
No 495
>KOG2697 consensus Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=42.97 E-value=5 Score=37.58 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=30.2
Q ss_pred ccccCcCccCCCcccccccccccceeEeeecccc
Q 013883 12 SKMLKPSAFGSSFSSSALLSFSKHLHTISITDSA 45 (434)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (434)
..+|||=+-+++||+.||++|.|.++.++-|+..
T Consensus 376 NHtLPTYGYAr~YSGvstdsFlKfiT~Q~lTeEG 409 (446)
T KOG2697|consen 376 NHTLPTYGYARMYSGVSTDSFLKFITVQSLTEEG 409 (446)
T ss_pred CccCcccchhhhccCccHHHHHHHHHHhhcCHHH
Confidence 4689999999999999999999999888877644
No 496
>PRK05717 oxidoreductase; Validated
Probab=42.93 E-value=2.6e+02 Score=25.37 Aligned_cols=53 Identities=17% Similarity=0.033 Sum_probs=33.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR 224 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~ 224 (434)
.+++|.|+...-..+...+.+.|-+|++.+.............+.++..+..|
T Consensus 12 ~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D 64 (255)
T PRK05717 12 VALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMD 64 (255)
T ss_pred EEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEcc
Confidence 57777776666666777788888888876544433344444445555555555
No 497
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=42.74 E-value=1.3e+02 Score=28.38 Aligned_cols=96 Identities=18% Similarity=0.182 Sum_probs=54.0
Q ss_pred EcCChHHHHHHHHHHccCCCC--eEEEcCCC-chhHHHHHHHcCCE-EEEEEcCCCCCCCCHHHHHhhcccCCcEEEec-
Q 013883 175 VTSGCTEAIAATILGLINPGD--EVILFAPF-YDSYEATLSMAGAK-IKCITLRPPDFAIPIEELKSTISKNTRAILMN- 249 (434)
Q Consensus 175 ~t~G~~~ai~~~~~~l~~~gd--~Vlv~~p~-y~~~~~~~~~~G~~-~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~- 249 (434)
+|.|+--.-..+++.|++.|+ +|-+.+.. .......+...+.. ++...+. |.+.++++++ +...|+++
T Consensus 2 VTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~------d~~~l~~a~~-g~d~V~H~A 74 (280)
T PF01073_consen 2 VTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDIT------DPESLEEALE-GVDVVFHTA 74 (280)
T ss_pred EEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccc------cHHHHHHHhc-CCceEEEeC
Confidence 455555556667788888884 55554432 22222233334433 3333333 5788888886 45666665
Q ss_pred CCCCCcccCCCHH--------HHHHHHHHHHHcCcEE
Q 013883 250 TPHNPTGKMFTRE--------ELNVIASLCIENDVLV 278 (434)
Q Consensus 250 ~p~NPTG~~~~~e--------~l~~i~~la~~~~~~i 278 (434)
.|..+.| ..+.+ --+.|++.|+++++--
T Consensus 75 a~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~Vkr 110 (280)
T PF01073_consen 75 APVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKR 110 (280)
T ss_pred ccccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 5555555 22333 2456788899887653
No 498
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=42.24 E-value=96 Score=29.45 Aligned_cols=48 Identities=17% Similarity=0.171 Sum_probs=29.5
Q ss_pred CCCCCCHHHHHhhccc----C-CcEEEecCCCCCcccCCCHHHHHHHHHHHHHc
Q 013883 226 PDFAIPIEELKSTISK----N-TRAILMNTPHNPTGKMFTREELNVIASLCIEN 274 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~~----~-~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~ 274 (434)
+++.+|.+.+++.++. + ...|++ +-++--+..++.||++++++.+.+.
T Consensus 14 ~dg~iD~~~~~~~i~~~i~~G~v~gi~~-~GstGE~~~Lt~eEr~~~~~~~~~~ 66 (290)
T TIGR00683 14 EDGTINEKGLRQIIRHNIDKMKVDGLYV-GGSTGENFMLSTEEKKEIFRIAKDE 66 (290)
T ss_pred CCCCcCHHHHHHHHHHHHhCCCcCEEEE-CCcccccccCCHHHHHHHHHHHHHH
Confidence 3567887777776643 4 555554 2333445567778877777766553
No 499
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=41.70 E-value=5.7 Score=39.35 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=28.3
Q ss_pred ccccCcCccCCCcccccccccccceeEeeecc
Q 013883 12 SKMLKPSAFGSSFSSSALLSFSKHLHTISITD 43 (434)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 (434)
+.+|||+++++.||+.+..+|.|+++.+..++
T Consensus 360 NHVLPT~g~AR~~s~L~v~dF~K~~tv~~~~~ 391 (425)
T COG0141 360 NHVLPTSGTARFSSGLSVYDFLKRSTVQELSE 391 (425)
T ss_pred CccCCCCccchhcCCccHHHhhhHHHHHHcCH
Confidence 56999999999999999999999987776664
No 500
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=41.47 E-value=2.6e+02 Score=26.07 Aligned_cols=98 Identities=14% Similarity=0.162 Sum_probs=57.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcC--CCchhHHHH--HHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFA--PFYDSYEAT--LSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAIL 247 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~--p~y~~~~~~--~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~ 247 (434)
++++|-|.+..+..++... +++.+|++.+ |...+.... +...|+++..++-. .+-..+ ++...++
T Consensus 88 dvILT~s~S~~v~~~l~~~-~~~~~V~v~ESrP~~eG~~~a~~L~~~GI~vtli~Ds---------a~~~~m-~~vd~Vl 156 (253)
T PRK06372 88 SVIGTISSSQVLKAFISSS-EKIKSVYILESRPMLEGIDMAKLLVKSGIDVVLLTDA---------SMCEAV-LNVDAVI 156 (253)
T ss_pred CEEEEeCCcHHHHHHHHhc-CCCCEEEEecCCCchHHHHHHHHHHHCCCCEEEEehh---------HHHHHH-HhCCEEE
Confidence 5888888888888777543 3445677654 666664332 34468877655421 111222 2344444
Q ss_pred e-cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 248 M-NTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 248 ~-~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+ ..--...|.++++----.++-.|+++++++++
T Consensus 157 vGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 157 VGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred ECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 4 22233445555544445577789999999987
Done!