Query 013883
Match_columns 434
No_of_seqs 296 out of 2751
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 18:53:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013883.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013883hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b5p_A Protein (aspartate amin 100.0 1.4E-49 4.8E-54 394.4 38.7 322 108-434 30-355 (385)
2 3b46_A Aminotransferase BNA3; 100.0 1.3E-49 4.4E-54 402.5 30.0 327 107-434 55-410 (447)
3 3k7y_A Aspartate aminotransfer 100.0 3E-49 1E-53 393.8 26.9 335 76-432 8-380 (405)
4 3fvs_A Kynurenine--oxoglutarat 100.0 1.9E-48 6.6E-53 390.4 30.7 342 92-434 11-385 (422)
5 3e2y_A Kynurenine-oxoglutarate 100.0 4E-48 1.4E-52 386.4 30.9 340 94-434 8-376 (410)
6 1u08_A Hypothetical aminotrans 100.0 1.9E-47 6.5E-52 378.8 35.2 327 108-434 29-356 (386)
7 1gd9_A Aspartate aminotransfer 100.0 6.3E-47 2.2E-51 375.3 37.9 343 89-433 5-353 (389)
8 3h14_A Aminotransferase, class 100.0 8.5E-47 2.9E-51 374.8 36.0 318 108-434 30-349 (391)
9 2o0r_A RV0858C (N-succinyldiam 100.0 4.9E-47 1.7E-51 379.2 33.8 341 93-433 9-352 (411)
10 2x5d_A Probable aminotransfera 100.0 1.4E-46 4.7E-51 376.1 32.7 324 108-433 36-365 (412)
11 1j32_A Aspartate aminotransfer 100.0 2.9E-46 9.9E-51 370.5 34.7 324 108-433 29-356 (388)
12 3jtx_A Aminotransferase; NP_28 100.0 4.4E-46 1.5E-50 370.0 35.6 321 108-434 29-360 (396)
13 3aow_A Putative uncharacterize 100.0 4.9E-46 1.7E-50 376.3 35.5 339 87-434 54-410 (448)
14 1yiz_A Kynurenine aminotransfe 100.0 1.5E-46 5E-51 377.8 31.4 326 109-434 37-392 (429)
15 2o1b_A Aminotransferase, class 100.0 1.1E-46 3.9E-51 376.0 30.2 321 110-433 48-370 (404)
16 3dyd_A Tyrosine aminotransfera 100.0 6.3E-46 2.1E-50 373.3 33.9 345 76-434 31-394 (427)
17 1o4s_A Aspartate aminotransfer 100.0 7.1E-46 2.4E-50 368.2 33.3 318 108-433 40-358 (389)
18 4f4e_A Aromatic-amino-acid ami 100.0 2E-46 6.9E-51 376.0 28.1 316 109-431 49-396 (420)
19 2dou_A Probable N-succinyldiam 100.0 8.9E-46 3E-50 365.5 31.9 321 108-433 24-345 (376)
20 4h51_A Aspartate aminotransfer 100.0 2.3E-47 8E-52 380.6 19.5 338 71-432 19-392 (420)
21 1xi9_A Putative transaminase; 100.0 1.7E-45 5.9E-50 367.4 32.1 321 108-433 37-370 (406)
22 2z61_A Probable aspartate amin 100.0 5.6E-45 1.9E-49 359.0 34.6 310 108-433 28-338 (370)
23 3fdb_A Beta C-S lyase, putativ 100.0 1.2E-45 4E-50 364.3 28.7 318 108-434 22-344 (377)
24 3qgu_A LL-diaminopimelate amin 100.0 2.6E-45 8.8E-50 371.0 31.8 315 108-434 68-408 (449)
25 3ele_A Amino transferase; RER0 100.0 6.6E-45 2.3E-49 361.9 33.3 314 109-434 35-366 (398)
26 3nra_A Aspartate aminotransfer 100.0 3.1E-45 1.1E-49 365.0 30.1 324 110-434 40-373 (407)
27 7aat_A Aspartate aminotransfer 100.0 1.1E-45 3.7E-50 368.1 25.4 340 73-432 4-378 (401)
28 3tcm_A Alanine aminotransferas 100.0 3.5E-45 1.2E-49 374.9 29.2 334 97-434 83-461 (500)
29 3kax_A Aminotransferase, class 100.0 3E-44 1E-48 354.8 33.5 322 109-434 24-353 (383)
30 3g0t_A Putative aminotransfera 100.0 8.3E-45 2.8E-49 365.6 29.9 321 107-433 42-403 (437)
31 3meb_A Aspartate aminotransfer 100.0 1.5E-45 5.3E-50 372.7 24.1 336 76-431 28-417 (448)
32 3dzz_A Putative pyridoxal 5'-p 100.0 3.5E-44 1.2E-48 355.3 33.3 321 110-434 28-357 (391)
33 2gb3_A Aspartate aminotransfer 100.0 3.7E-44 1.3E-48 358.2 33.5 317 108-433 42-366 (409)
34 1v2d_A Glutamine aminotransfer 100.0 1.5E-44 5.3E-49 357.3 30.2 309 109-434 25-337 (381)
35 3ezs_A Aminotransferase ASPB; 100.0 8.7E-45 3E-49 358.2 26.7 311 110-434 24-341 (376)
36 3t18_A Aminotransferase class 100.0 2.8E-44 9.5E-49 359.4 28.9 316 109-432 37-385 (413)
37 3ei9_A LL-diaminopimelate amin 100.0 6E-44 2E-48 359.2 31.5 314 109-434 56-396 (432)
38 2r2n_A Kynurenine/alpha-aminoa 100.0 6.1E-44 2.1E-48 358.5 30.6 317 109-434 31-388 (425)
39 4dq6_A Putative pyridoxal phos 100.0 1.3E-43 4.4E-48 351.3 32.4 321 109-434 32-361 (391)
40 1c7n_A Cystalysin; transferase 100.0 5.8E-44 2E-48 355.2 29.8 320 110-433 32-360 (399)
41 4eu1_A Mitochondrial aspartate 100.0 4.2E-45 1.5E-49 364.9 21.1 331 82-432 26-386 (409)
42 1vp4_A Aminotransferase, putat 100.0 4.4E-44 1.5E-48 359.5 27.9 333 93-433 27-382 (425)
43 3rq1_A Aminotransferase class 100.0 1.1E-43 3.9E-48 355.5 28.9 317 108-432 37-387 (418)
44 1d2f_A MALY protein; aminotran 100.0 4.6E-43 1.6E-47 347.8 32.7 318 110-433 29-356 (390)
45 3l8a_A METC, putative aminotra 100.0 3.6E-43 1.2E-47 352.5 31.8 322 108-433 60-389 (421)
46 2x5f_A Aspartate_tyrosine_phen 100.0 3.5E-44 1.2E-48 360.7 24.4 317 108-430 46-398 (430)
47 3fsl_A Aromatic-amino-acid ami 100.0 7.4E-44 2.5E-48 354.1 26.4 316 109-431 26-374 (397)
48 3ihj_A Alanine aminotransferas 100.0 1.7E-43 5.9E-48 362.0 28.4 309 124-434 103-460 (498)
49 2zc0_A Alanine glyoxylate tran 100.0 1.3E-42 4.6E-47 346.3 33.6 316 110-433 35-368 (407)
50 1bw0_A TAT, protein (tyrosine 100.0 1.3E-42 4.3E-47 347.6 32.1 323 109-434 33-383 (416)
51 2zyj_A Alpha-aminodipate amino 100.0 1.7E-42 5.7E-47 344.7 29.8 315 106-433 29-357 (397)
52 3d6k_A Putative aminotransfera 100.0 7.5E-43 2.6E-47 350.3 25.1 328 91-432 14-379 (422)
53 3ffh_A Histidinol-phosphate am 100.0 1.9E-41 6.6E-46 332.7 33.6 304 109-433 32-336 (363)
54 3get_A Histidinol-phosphate am 100.0 4.5E-42 1.5E-46 337.5 28.6 306 109-433 30-338 (365)
55 3asa_A LL-diaminopimelate amin 100.0 7.1E-42 2.4E-46 340.7 30.3 312 108-433 32-360 (400)
56 3ppl_A Aspartate aminotransfer 100.0 8.5E-43 2.9E-47 350.3 23.5 323 97-433 21-382 (427)
57 2q7w_A Aspartate aminotransfer 100.0 7.2E-43 2.5E-47 346.8 22.7 314 109-430 26-372 (396)
58 1ajs_A Aspartate aminotransfer 100.0 1.8E-42 6.2E-47 346.0 24.6 314 109-430 30-384 (412)
59 3ez1_A Aminotransferase MOCR f 100.0 7.4E-43 2.5E-47 350.1 21.7 330 90-433 6-378 (423)
60 3g7q_A Valine-pyruvate aminotr 100.0 7.4E-42 2.5E-46 341.8 27.6 319 108-434 30-374 (417)
61 3ly1_A Putative histidinol-pho 100.0 7.3E-42 2.5E-46 334.4 26.8 304 108-432 15-321 (354)
62 1yaa_A Aspartate aminotransfer 100.0 3.1E-42 1.1E-46 344.4 24.5 313 109-429 29-383 (412)
63 1iay_A ACC synthase 2, 1-amino 100.0 5.2E-42 1.8E-46 344.6 26.2 320 110-433 37-393 (428)
64 3piu_A 1-aminocyclopropane-1-c 100.0 1.9E-41 6.4E-46 341.3 27.1 320 110-433 39-398 (435)
65 3op7_A Aminotransferase class 100.0 9.5E-41 3.2E-45 329.3 29.7 294 129-434 46-341 (375)
66 3ftb_A Histidinol-phosphate am 100.0 3.1E-40 1.1E-44 323.6 32.9 303 108-434 25-330 (361)
67 1fg7_A Histidinol phosphate am 100.0 1.1E-40 3.8E-45 327.0 29.1 294 110-433 30-328 (356)
68 3if2_A Aminotransferase; YP_26 100.0 7E-41 2.4E-45 337.9 27.6 322 107-434 29-400 (444)
69 3euc_A Histidinol-phosphate am 100.0 2.3E-40 7.9E-45 325.5 30.6 301 109-433 30-336 (367)
70 2ay1_A Aroat, aromatic amino a 100.0 3.2E-41 1.1E-45 334.8 24.4 312 109-431 26-370 (394)
71 3f6t_A Aspartate aminotransfer 100.0 6.3E-42 2.1E-46 353.1 19.8 318 110-434 104-493 (533)
72 3b1d_A Betac-S lyase; HET: PLP 100.0 1.9E-44 6.6E-49 358.2 0.0 320 110-433 32-360 (392)
73 1lc5_A COBD, L-threonine-O-3-p 100.0 8.5E-40 2.9E-44 321.4 31.1 301 110-433 25-328 (364)
74 3cq5_A Histidinol-phosphate am 100.0 3.9E-39 1.3E-43 317.3 33.1 302 111-430 32-338 (369)
75 2zy4_A L-aspartate beta-decarb 100.0 1.8E-40 6.2E-45 342.6 22.7 314 111-434 106-490 (546)
76 3bwn_A AT1G70560, L-tryptophan 100.0 8.7E-41 3E-45 332.0 16.1 298 108-434 21-356 (391)
77 3fkd_A L-threonine-O-3-phospha 100.0 4.9E-39 1.7E-43 314.1 27.2 295 109-434 15-311 (350)
78 3p1t_A Putative histidinol-pho 100.0 4.4E-38 1.5E-42 305.4 31.0 293 108-433 15-307 (337)
79 3hdo_A Histidinol-phosphate am 100.0 1.1E-37 3.6E-42 306.0 30.9 296 109-432 26-324 (360)
80 1uu1_A Histidinol-phosphate am 100.0 9.3E-38 3.2E-42 303.4 26.2 291 110-431 20-311 (335)
81 2hox_A ALLIIN lyase 1; cystein 100.0 4.7E-39 1.6E-43 323.1 17.0 296 110-434 57-394 (427)
82 3a2b_A Serine palmitoyltransfe 100.0 9.1E-36 3.1E-40 296.1 26.4 302 110-433 44-356 (398)
83 1bs0_A Protein (8-amino-7-oxon 100.0 2.7E-32 9.3E-37 269.6 25.1 297 110-433 40-351 (384)
84 1t3i_A Probable cysteine desul 100.0 1.9E-32 6.5E-37 273.4 23.4 299 110-433 28-372 (420)
85 1eg5_A Aminotransferase; PLP-d 100.0 3.5E-32 1.2E-36 268.1 23.8 297 112-433 3-324 (384)
86 1e5e_A MGL, methionine gamma-l 100.0 3.4E-32 1.2E-36 271.2 23.7 284 112-433 21-339 (404)
87 3tqx_A 2-amino-3-ketobutyrate 100.0 2.5E-32 8.6E-37 270.8 22.4 298 110-431 44-358 (399)
88 1vjo_A Alanine--glyoxylate ami 100.0 7.8E-32 2.7E-36 267.0 25.0 291 122-433 44-361 (393)
89 2dr1_A PH1308 protein, 386AA l 100.0 1.9E-31 6.4E-36 263.2 26.5 289 123-433 31-346 (386)
90 1kmj_A Selenocysteine lyase; p 100.0 2.9E-31 9.9E-36 263.5 25.5 299 110-433 23-364 (406)
91 2w8t_A SPT, serine palmitoyltr 100.0 2.4E-31 8.1E-36 267.1 24.4 299 109-433 64-379 (427)
92 1elu_A L-cysteine/L-cystine C- 100.0 1.1E-31 3.9E-36 265.1 20.8 299 110-431 16-360 (390)
93 1fc4_A 2-amino-3-ketobutyrate 100.0 2.2E-31 7.6E-36 264.6 22.6 297 108-433 44-361 (401)
94 1svv_A Threonine aldolase; str 100.0 2.7E-31 9.3E-36 259.3 22.3 298 109-428 13-321 (359)
95 2bwn_A 5-aminolevulinate synth 100.0 3.2E-31 1.1E-35 263.5 20.4 300 110-433 47-364 (401)
96 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 6.8E-32 2.3E-36 265.1 14.9 291 109-429 7-326 (371)
97 1b9h_A AHBA synthase, protein 100.0 3E-30 1E-34 255.3 26.3 289 116-431 4-323 (388)
98 2huf_A Alanine glyoxylate amin 100.0 1.3E-30 4.5E-35 258.0 22.5 298 110-433 19-349 (393)
99 3ruy_A Ornithine aminotransfer 100.0 3.6E-31 1.2E-35 262.4 18.0 294 110-431 37-363 (392)
100 2eh6_A Acoat, acetylornithine 100.0 3.3E-31 1.1E-35 260.8 16.4 291 110-430 29-346 (375)
101 2ch1_A 3-hydroxykynurenine tra 100.0 2.1E-30 7.1E-35 256.9 21.3 289 121-432 27-348 (396)
102 3kki_A CAI-1 autoinducer synth 100.0 3.2E-30 1.1E-34 257.1 22.8 297 108-431 58-366 (409)
103 1m32_A 2-aminoethylphosphonate 100.0 4.4E-30 1.5E-34 251.2 22.8 301 110-433 4-333 (366)
104 2z9v_A Aspartate aminotransfer 100.0 3.5E-30 1.2E-34 254.9 22.1 296 112-432 10-336 (392)
105 2aeu_A Hypothetical protein MJ 100.0 1.8E-29 6.3E-34 248.9 26.5 292 110-433 29-336 (374)
106 1v72_A Aldolase; PLP-dependent 100.0 6.1E-30 2.1E-34 249.5 22.4 296 108-431 6-320 (356)
107 3f9t_A TDC, L-tyrosine decarbo 100.0 1.3E-29 4.4E-34 250.4 25.1 294 120-431 39-366 (397)
108 1iug_A Putative aspartate amin 100.0 3.7E-30 1.3E-34 250.7 20.5 284 121-431 10-313 (352)
109 1jg8_A L-ALLO-threonine aldola 100.0 1.6E-30 5.5E-35 253.2 17.7 295 109-430 3-314 (347)
110 4adb_A Succinylornithine trans 100.0 2.2E-30 7.6E-35 257.6 18.7 300 110-431 40-369 (406)
111 3cai_A Possible aminotransfera 100.0 7.8E-30 2.7E-34 253.7 22.5 296 110-431 26-365 (406)
112 4eb5_A Probable cysteine desul 100.0 7.5E-30 2.6E-34 251.3 21.4 287 122-433 11-321 (382)
113 1sff_A 4-aminobutyrate aminotr 100.0 7E-31 2.4E-35 263.1 13.7 306 110-432 42-392 (426)
114 2ez2_A Beta-tyrosinase, tyrosi 100.0 6.3E-30 2.1E-34 258.7 20.3 296 111-429 44-380 (456)
115 3zrp_A Serine-pyruvate aminotr 100.0 7E-30 2.4E-34 251.6 20.1 287 121-432 11-330 (384)
116 3lvm_A Cysteine desulfurase; s 100.0 2E-29 6.7E-34 252.2 23.5 297 109-433 21-347 (423)
117 2rfv_A Methionine gamma-lyase; 100.0 1.5E-29 5.2E-34 251.5 22.0 286 112-433 23-344 (398)
118 2po3_A 4-dehydrase; external a 100.0 6.9E-29 2.4E-33 248.8 26.8 289 113-429 20-328 (424)
119 2ord_A Acoat, acetylornithine 100.0 3.3E-30 1.1E-34 255.9 16.1 296 110-430 41-365 (397)
120 2dkj_A Serine hydroxymethyltra 100.0 2.7E-29 9.2E-34 249.8 22.4 304 110-433 24-345 (407)
121 3isl_A Purine catabolism prote 100.0 6.7E-29 2.3E-33 247.5 24.4 266 149-431 43-354 (416)
122 2yrr_A Aminotransferase, class 100.0 2.3E-29 7.8E-34 244.9 19.8 288 121-433 9-319 (353)
123 3i4j_A Aminotransferase, class 100.0 4.4E-29 1.5E-33 250.6 22.3 311 110-431 30-390 (430)
124 3nnk_A Ureidoglycine-glyoxylat 100.0 1.3E-28 4.4E-33 245.1 25.2 289 122-431 23-354 (411)
125 2eo5_A 419AA long hypothetical 100.0 3.3E-29 1.1E-33 250.8 20.0 300 110-430 43-386 (419)
126 3kgw_A Alanine-glyoxylate amin 100.0 1.6E-28 5.3E-33 242.7 23.0 291 121-432 32-353 (393)
127 1vef_A Acetylornithine/acetyl- 100.0 2.5E-29 8.6E-34 249.3 16.5 299 110-430 46-365 (395)
128 1ax4_A Tryptophanase; tryptoph 100.0 4.8E-29 1.6E-33 252.9 18.7 299 110-431 44-393 (467)
129 2pb2_A Acetylornithine/succiny 100.0 1.2E-28 4.3E-33 246.7 21.0 301 109-431 57-387 (420)
130 3pj0_A LMO0305 protein; struct 100.0 2.8E-29 9.7E-34 245.5 15.1 301 110-433 14-324 (359)
131 4hvk_A Probable cysteine desul 100.0 4.2E-28 1.4E-32 238.4 23.0 288 122-433 11-321 (382)
132 3nx3_A Acoat, acetylornithine 100.0 3.8E-28 1.3E-32 240.9 22.8 300 110-431 37-364 (395)
133 3f0h_A Aminotransferase; RER07 100.0 6.1E-28 2.1E-32 237.4 24.1 298 111-431 20-339 (376)
134 2oga_A Transaminase; PLP-depen 100.0 3E-28 1E-32 242.2 22.0 288 110-430 31-337 (399)
135 3lws_A Aromatic amino acid bet 100.0 2.7E-29 9.1E-34 245.6 13.5 272 140-433 41-322 (357)
136 3dxv_A Alpha-amino-epsilon-cap 100.0 1E-28 3.5E-33 248.6 17.6 310 110-432 44-393 (439)
137 3gju_A Putative aminotransfera 100.0 8.6E-28 2.9E-32 243.5 24.3 313 109-431 51-424 (460)
138 1mdo_A ARNB aminotransferase; 100.0 3.2E-27 1.1E-31 233.8 27.8 288 110-432 9-331 (393)
139 3ffr_A Phosphoserine aminotran 100.0 2.5E-27 8.6E-32 231.4 26.0 296 110-432 4-330 (362)
140 2c81_A Glutamine-2-deoxy-scyll 100.0 1E-26 3.5E-31 232.5 29.9 292 115-431 5-342 (418)
141 3n0l_A Serine hydroxymethyltra 100.0 3.3E-27 1.1E-31 235.5 26.3 301 110-431 26-344 (417)
142 4ffc_A 4-aminobutyrate aminotr 100.0 5E-28 1.7E-32 244.7 20.1 315 109-433 64-418 (453)
143 2oat_A Ornithine aminotransfer 100.0 8.4E-28 2.9E-32 242.1 21.6 297 109-430 76-407 (439)
144 3vax_A Putative uncharacterize 100.0 2.5E-28 8.5E-33 242.2 17.2 301 110-433 20-347 (400)
145 1s0a_A Adenosylmethionine-8-am 100.0 2.2E-27 7.7E-32 238.1 23.9 306 110-430 44-393 (429)
146 2bkw_A Alanine-glyoxylate amin 100.0 1.7E-27 5.7E-32 234.8 22.2 297 110-433 5-346 (385)
147 3a9z_A Selenocysteine lyase; P 100.0 1E-27 3.5E-32 240.6 20.6 297 110-432 18-374 (432)
148 1zod_A DGD, 2,2-dialkylglycine 100.0 3.9E-28 1.3E-32 243.8 16.7 309 110-433 44-399 (433)
149 4a6r_A Omega transaminase; tra 100.0 3.2E-27 1.1E-31 239.2 23.2 313 109-431 50-419 (459)
150 1z7d_A Ornithine aminotransfer 100.0 2.6E-27 9E-32 238.0 21.7 299 109-430 65-397 (433)
151 3n5m_A Adenosylmethionine-8-am 100.0 2.7E-27 9.2E-32 239.2 21.5 311 109-433 49-417 (452)
152 3dr4_A Putative perosamine syn 100.0 1.8E-26 6.2E-31 228.5 26.9 289 110-431 23-338 (391)
153 3mc6_A Sphingosine-1-phosphate 100.0 1.1E-26 3.6E-31 237.7 25.8 297 122-431 75-406 (497)
154 3l44_A Glutamate-1-semialdehyd 100.0 1.8E-27 6E-32 239.2 18.3 307 109-431 55-401 (434)
155 1rv3_A Serine hydroxymethyltra 99.9 6.3E-27 2.2E-31 238.4 22.3 305 109-431 44-391 (483)
156 1ibj_A CBL, cystathionine beta 99.9 1.2E-27 4.1E-32 242.0 16.0 293 110-431 90-408 (464)
157 3mad_A Sphingosine-1-phosphate 99.9 1E-26 3.5E-31 238.8 22.8 290 125-430 110-434 (514)
158 3oks_A 4-aminobutyrate transam 99.9 6.4E-27 2.2E-31 236.4 20.9 315 109-433 61-420 (451)
159 3fq8_A Glutamate-1-semialdehyd 99.9 6.4E-27 2.2E-31 234.6 20.2 303 109-432 52-399 (427)
160 3dod_A Adenosylmethionine-8-am 99.9 4.9E-27 1.7E-31 237.1 18.6 310 109-431 44-413 (448)
161 3k28_A Glutamate-1-semialdehyd 99.9 3.4E-27 1.2E-31 236.8 17.4 304 109-431 53-398 (429)
162 1w23_A Phosphoserine aminotran 99.9 6.5E-28 2.2E-32 235.8 11.8 295 110-432 3-328 (360)
163 1qz9_A Kynureninase; kynurenin 99.9 1.6E-26 5.6E-31 230.5 21.6 291 110-429 28-368 (416)
164 3ecd_A Serine hydroxymethyltra 99.9 4E-26 1.4E-30 228.0 24.2 299 110-428 33-349 (425)
165 2cy8_A D-phgat, D-phenylglycin 99.9 6.7E-27 2.3E-31 236.3 17.6 295 110-430 58-407 (453)
166 1wyu_B Glycine dehydrogenase s 99.9 2.4E-26 8.1E-31 233.7 21.7 302 110-432 67-405 (474)
167 2vi8_A Serine hydroxymethyltra 99.9 3.5E-26 1.2E-30 227.1 21.0 301 110-431 25-342 (405)
168 3a8u_X Omega-amino acid--pyruv 99.9 1E-26 3.4E-31 234.8 17.2 307 110-430 51-416 (449)
169 3uwc_A Nucleotide-sugar aminot 99.9 3.6E-26 1.2E-30 224.7 20.7 287 110-431 7-313 (374)
170 3nyt_A Aminotransferase WBPE; 99.9 1.2E-25 4.2E-30 220.8 24.2 273 124-431 15-309 (367)
171 2c0r_A PSAT, phosphoserine ami 99.9 7E-27 2.4E-31 229.0 15.0 293 110-433 4-330 (362)
172 2oqx_A Tryptophanase; lyase, p 99.9 6.7E-27 2.3E-31 237.1 15.2 298 110-431 42-393 (467)
173 3h7f_A Serine hydroxymethyltra 99.9 6.9E-26 2.4E-30 228.6 22.3 299 110-428 46-366 (447)
174 2epj_A Glutamate-1-semialdehyd 99.9 1.7E-26 5.7E-31 232.2 16.6 298 110-431 57-402 (434)
175 1o69_A Aminotransferase; struc 99.9 1.6E-25 5.5E-30 222.1 23.4 275 125-431 12-332 (394)
176 3i5t_A Aminotransferase; pyrid 99.9 1.1E-25 3.7E-30 228.9 22.5 309 109-430 54-423 (476)
177 3gbx_A Serine hydroxymethyltra 99.9 3.8E-25 1.3E-29 220.6 25.3 298 111-429 32-349 (420)
178 2e7u_A Glutamate-1-semialdehyd 99.9 3.3E-26 1.1E-30 229.3 17.4 297 110-431 53-398 (424)
179 3hmu_A Aminotransferase, class 99.9 7.2E-26 2.5E-30 229.9 19.6 310 109-430 55-421 (472)
180 1gc0_A Methionine gamma-lyase; 99.9 2.1E-25 7.3E-30 221.6 22.5 247 147-429 66-338 (398)
181 3tfu_A Adenosylmethionine-8-am 99.9 2.5E-26 8.7E-31 232.3 15.7 307 110-431 76-423 (457)
182 2fnu_A Aminotransferase; prote 99.9 7.6E-25 2.6E-29 215.1 25.8 275 122-428 10-313 (375)
183 3ndn_A O-succinylhomoserine su 99.9 5.6E-25 1.9E-29 219.5 24.7 257 150-433 81-364 (414)
184 4e77_A Glutamate-1-semialdehyd 99.9 9.4E-26 3.2E-30 226.3 17.3 306 109-431 53-400 (429)
185 3cog_A Cystathionine gamma-lya 99.9 2E-25 7E-30 222.1 18.6 245 147-428 68-338 (403)
186 2dgk_A GAD-beta, GADB, glutama 99.9 1.9E-24 6.6E-29 218.3 25.7 303 112-427 44-392 (452)
187 1cs1_A CGS, protein (cystathio 99.9 3.6E-24 1.2E-28 211.8 27.1 247 147-429 53-324 (386)
188 1pff_A Methionine gamma-lyase; 99.9 4.8E-25 1.7E-29 213.2 20.2 186 150-361 2-195 (331)
189 3frk_A QDTB; aminotransferase, 99.9 1E-24 3.4E-29 214.6 22.8 277 124-431 16-310 (373)
190 2cb1_A O-acetyl homoserine sul 99.9 1.1E-23 3.7E-28 210.3 29.4 271 120-431 31-355 (412)
191 3acz_A Methionine gamma-lyase; 99.9 3.4E-24 1.2E-28 212.3 25.2 246 147-429 60-330 (389)
192 3qhx_A Cystathionine gamma-syn 99.9 2.8E-24 9.5E-29 213.2 24.0 253 148-433 68-345 (392)
193 2cjg_A L-lysine-epsilon aminot 99.9 1.4E-25 4.6E-30 226.6 12.8 302 110-430 55-416 (449)
194 3ju7_A Putative PLP-dependent 99.9 8.6E-24 2.9E-28 208.5 23.9 285 114-431 5-319 (377)
195 3jzl_A Putative cystathionine 99.9 2.4E-24 8.2E-29 214.1 18.5 255 141-422 55-338 (409)
196 2fyf_A PSAT, phosphoserine ami 99.9 4.8E-24 1.7E-28 211.7 20.4 290 110-431 40-363 (398)
197 3ht4_A Aluminum resistance pro 99.9 3E-24 1E-28 215.0 18.5 257 150-422 65-344 (431)
198 3hvy_A Cystathionine beta-lyas 99.9 4E-24 1.4E-28 213.2 19.2 253 141-421 70-354 (427)
199 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 5.2E-23 1.8E-27 206.9 27.5 286 111-431 33-377 (437)
200 1n8p_A Cystathionine gamma-lya 99.9 4.2E-24 1.4E-28 212.0 19.2 209 147-387 56-274 (393)
201 1qgn_A Protein (cystathionine 99.9 1.7E-23 5.7E-28 210.2 23.3 211 149-389 117-334 (445)
202 3i16_A Aluminum resistance pro 99.9 4.5E-24 1.5E-28 212.8 18.1 249 147-421 74-354 (427)
203 3e9k_A Kynureninase; kynurenin 99.9 1.5E-23 5.1E-28 212.5 21.1 297 110-429 67-427 (465)
204 3hbx_A GAD 1, glutamate decarb 99.9 8.4E-23 2.9E-27 208.9 22.9 296 121-428 66-403 (502)
205 3b8x_A WBDK, pyridoxamine 5-ph 99.9 1.8E-21 6.1E-26 192.5 30.9 286 111-429 3-334 (390)
206 3ri6_A O-acetylhomoserine sulf 99.9 1.1E-22 3.7E-27 203.6 22.2 254 147-433 83-380 (430)
207 2a7v_A Serine hydroxymethyltra 99.9 1.4E-22 4.7E-27 205.3 22.9 306 110-431 55-397 (490)
208 2yky_A Beta-transaminase; tran 99.8 1.1E-25 3.6E-30 226.9 0.0 299 108-431 99-433 (465)
209 2fq6_A Cystathionine beta-lyas 99.9 2.5E-22 8.6E-27 200.2 22.8 210 148-387 84-300 (415)
210 2x3l_A ORN/Lys/Arg decarboxyla 99.9 5E-23 1.7E-27 207.5 17.1 260 142-431 53-324 (446)
211 3ke3_A Putative serine-pyruvat 99.9 3.5E-22 1.2E-26 197.1 22.3 264 150-432 35-337 (379)
212 1js3_A DDC;, DOPA decarboxylas 99.9 7.7E-22 2.6E-26 201.0 22.7 289 124-426 87-433 (486)
213 3nmy_A Xometc, cystathionine g 99.9 6.3E-21 2.1E-25 189.3 28.3 208 149-387 70-285 (400)
214 2okj_A Glutamate decarboxylase 99.9 2.5E-21 8.5E-26 198.2 25.4 288 129-426 111-460 (504)
215 3vp6_A Glutamate decarboxylase 99.9 1.8E-21 6.3E-26 199.3 24.4 269 124-401 109-426 (511)
216 2z67_A O-phosphoseryl-tRNA(SEC 99.9 5.7E-22 1.9E-26 200.4 17.8 261 148-425 131-406 (456)
217 1wyu_A Glycine dehydrogenase ( 99.9 2E-21 6.9E-26 195.4 21.4 290 112-433 67-408 (438)
218 1ohv_A 4-aminobutyrate aminotr 99.9 1.7E-22 5.9E-27 205.0 13.1 305 108-430 62-439 (472)
219 2ctz_A O-acetyl-L-homoserine s 99.9 3.7E-20 1.3E-24 185.2 25.9 216 148-392 60-314 (421)
220 2qma_A Diaminobutyrate-pyruvat 99.9 1.2E-20 4E-25 192.9 19.0 294 124-430 113-459 (497)
221 4e1o_A HDC, histidine decarbox 99.8 5.1E-20 1.7E-24 187.3 20.9 295 124-429 92-441 (481)
222 2jis_A Cysteine sulfinic acid 99.8 1.8E-19 6.2E-24 184.9 23.4 251 140-401 138-436 (515)
223 1c4k_A Protein (ornithine deca 99.8 1.2E-19 4E-24 191.8 22.1 234 147-394 174-447 (730)
224 3k40_A Aromatic-L-amino-acid d 99.8 1.1E-19 3.7E-24 184.6 20.5 294 125-430 88-435 (475)
225 2vyc_A Biodegradative arginine 99.8 1.3E-18 4.4E-23 185.2 23.2 225 148-386 207-463 (755)
226 3n75_A LDC, lysine decarboxyla 99.8 1.8E-17 6.1E-22 173.8 19.9 228 143-386 192-441 (715)
227 4ao9_A Beta-phenylalanine amin 99.8 1E-17 3.5E-22 167.6 16.0 301 108-431 86-419 (454)
228 3e77_A Phosphoserine aminotran 99.7 8.2E-16 2.8E-20 150.5 15.3 286 119-431 20-342 (377)
229 4atq_A 4-aminobutyrate transam 99.7 2.3E-15 7.7E-20 151.2 18.4 308 108-430 63-421 (456)
230 4e3q_A Pyruvate transaminase; 99.6 1.4E-14 4.8E-19 146.0 21.2 310 108-430 66-437 (473)
231 3qm2_A Phosphoserine aminotran 99.6 2E-15 7E-20 148.4 13.9 282 122-432 37-353 (386)
232 3ou5_A Serine hydroxymethyltra 99.6 1.5E-14 5.1E-19 141.2 18.4 265 148-428 98-394 (490)
233 3m5u_A Phosphoserine aminotran 99.6 1.1E-14 3.8E-19 141.9 16.4 287 110-431 5-327 (361)
234 4a0g_A Adenosylmethionine-8-am 99.5 1.6E-14 5.5E-19 154.9 10.4 297 124-431 399-798 (831)
235 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 4.7E-13 1.6E-17 131.3 13.9 263 150-422 116-398 (501)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 5.1E-13 1.8E-17 132.4 13.7 236 148-392 96-346 (450)
237 4fgs_A Probable dehydrogenase 84.6 5.1 0.00017 36.5 9.7 96 172-271 31-134 (273)
238 3rwb_A TPLDH, pyridoxal 4-dehy 80.8 9.5 0.00033 33.7 10.0 95 172-270 8-110 (247)
239 4dqx_A Probable oxidoreductase 79.0 16 0.00054 33.0 11.0 94 172-269 29-130 (277)
240 3grp_A 3-oxoacyl-(acyl carrier 77.2 14 0.00046 33.2 9.9 94 172-269 29-130 (266)
241 3gvc_A Oxidoreductase, probabl 77.2 12 0.00042 33.7 9.7 94 172-269 31-132 (277)
242 4e6p_A Probable sorbitol dehyd 76.9 17 0.00057 32.3 10.4 94 172-269 10-111 (259)
243 4g81_D Putative hexonate dehyd 76.2 19 0.00065 32.2 10.4 94 172-270 11-116 (255)
244 3gem_A Short chain dehydrogena 73.6 14 0.00047 33.0 8.9 92 172-269 29-127 (260)
245 1uls_A Putative 3-oxoacyl-acyl 73.5 20 0.0007 31.4 10.0 93 172-270 7-107 (245)
246 3m1a_A Putative dehydrogenase; 73.4 14 0.00047 33.2 9.0 93 172-268 7-107 (281)
247 3op4_A 3-oxoacyl-[acyl-carrier 73.2 21 0.00073 31.4 10.0 94 172-269 11-112 (248)
248 3tpc_A Short chain alcohol deh 73.1 14 0.00047 32.8 8.8 94 172-269 9-114 (257)
249 3l6e_A Oxidoreductase, short-c 72.8 16 0.00055 31.9 9.0 95 172-270 5-107 (235)
250 3n74_A 3-ketoacyl-(acyl-carrie 72.5 27 0.00092 30.8 10.6 94 172-269 11-113 (261)
251 4fn4_A Short chain dehydrogena 72.4 19 0.00065 32.2 9.4 94 172-270 9-115 (254)
252 4eso_A Putative oxidoreductase 72.1 18 0.00062 32.0 9.3 95 172-270 10-112 (255)
253 4hp8_A 2-deoxy-D-gluconate 3-d 71.9 17 0.00059 32.4 8.9 95 172-270 11-109 (247)
254 2ew8_A (S)-1-phenylethanol deh 71.9 35 0.0012 29.9 11.1 94 172-269 9-111 (249)
255 3rd5_A Mypaa.01249.C; ssgcid, 71.6 9 0.00031 34.8 7.2 74 172-249 18-93 (291)
256 1hxh_A 3BETA/17BETA-hydroxyste 71.4 32 0.0011 30.2 10.8 94 172-269 8-109 (253)
257 4ibo_A Gluconate dehydrogenase 71.0 28 0.00096 31.1 10.4 94 172-269 28-132 (271)
258 3tzq_B Short-chain type dehydr 70.9 21 0.00073 31.9 9.6 94 172-269 13-116 (271)
259 3guy_A Short-chain dehydrogena 70.8 11 0.00038 32.7 7.4 95 172-270 3-102 (230)
260 3ppi_A 3-hydroxyacyl-COA dehyd 70.8 18 0.00061 32.5 9.1 94 172-269 32-138 (281)
261 3lyl_A 3-oxoacyl-(acyl-carrier 70.6 37 0.0013 29.5 11.0 94 172-269 7-111 (247)
262 3pxx_A Carveol dehydrogenase; 70.4 18 0.00062 32.5 9.0 95 172-270 12-127 (287)
263 3ged_A Short-chain dehydrogena 70.2 24 0.00082 31.4 9.5 94 172-270 4-105 (247)
264 3gaf_A 7-alpha-hydroxysteroid 69.9 33 0.0011 30.3 10.5 94 172-269 14-117 (256)
265 1vl8_A Gluconate 5-dehydrogena 69.8 36 0.0012 30.3 10.8 94 172-269 23-128 (267)
266 3h7a_A Short chain dehydrogena 69.8 32 0.0011 30.3 10.4 94 172-269 9-112 (252)
267 2o23_A HADH2 protein; HSD17B10 69.7 32 0.0011 30.3 10.4 94 172-269 14-121 (265)
268 3l77_A Short-chain alcohol deh 69.2 42 0.0014 28.9 10.9 94 172-269 4-109 (235)
269 3tfo_A Putative 3-oxoacyl-(acy 68.8 46 0.0016 29.6 11.3 94 172-269 6-110 (264)
270 1hdc_A 3-alpha, 20 beta-hydrox 68.6 30 0.001 30.5 9.9 94 172-269 7-108 (254)
271 4fc7_A Peroxisomal 2,4-dienoyl 68.5 46 0.0016 29.7 11.3 94 172-269 29-134 (277)
272 3rkr_A Short chain oxidoreduct 67.8 52 0.0018 29.0 11.5 94 172-269 31-136 (262)
273 4dyv_A Short-chain dehydrogena 67.8 30 0.001 30.9 9.9 94 172-269 30-132 (272)
274 4gic_A HDH, histidinol dehydro 67.3 2.2 7.7E-05 41.0 2.1 34 12-45 373-406 (423)
275 3rih_A Short chain dehydrogena 67.2 44 0.0015 30.3 11.0 95 172-270 43-149 (293)
276 1x1t_A D(-)-3-hydroxybutyrate 67.2 44 0.0015 29.4 10.8 94 172-269 6-112 (260)
277 4iin_A 3-ketoacyl-acyl carrier 67.1 55 0.0019 29.0 11.5 101 164-269 24-136 (271)
278 3f9i_A 3-oxoacyl-[acyl-carrier 67.0 25 0.00085 30.7 9.0 74 172-249 16-91 (249)
279 3t7c_A Carveol dehydrogenase; 67.0 47 0.0016 30.1 11.2 94 172-269 30-147 (299)
280 2jah_A Clavulanic acid dehydro 67.0 48 0.0016 29.0 10.9 94 172-269 9-113 (247)
281 3ai3_A NADPH-sorbose reductase 67.0 51 0.0018 29.0 11.3 94 172-269 9-114 (263)
282 3sc4_A Short chain dehydrogena 67.0 60 0.002 29.1 11.8 95 172-270 11-123 (285)
283 2ae2_A Protein (tropinone redu 66.4 58 0.002 28.6 11.4 94 172-269 11-116 (260)
284 3ak4_A NADH-dependent quinucli 66.2 38 0.0013 29.9 10.2 94 172-269 14-115 (263)
285 4dmm_A 3-oxoacyl-[acyl-carrier 65.7 32 0.0011 30.6 9.6 95 172-270 30-136 (269)
286 3gh5_A HEX1, beta-hexosaminida 65.4 16 0.00053 36.6 7.8 114 162-280 123-274 (525)
287 3t4x_A Oxidoreductase, short c 65.4 66 0.0022 28.4 11.7 94 172-269 12-114 (267)
288 2uvd_A 3-oxoacyl-(acyl-carrier 65.3 54 0.0018 28.5 10.9 94 172-269 6-111 (246)
289 4gkb_A 3-oxoacyl-[acyl-carrier 65.3 48 0.0016 29.6 10.6 94 172-270 9-112 (258)
290 3tjr_A Short chain dehydrogena 65.2 46 0.0016 30.2 10.8 94 172-269 33-137 (301)
291 2pnf_A 3-oxoacyl-[acyl-carrier 65.1 61 0.0021 27.9 11.2 94 172-269 9-114 (248)
292 3qlj_A Short chain dehydrogena 65.0 42 0.0014 30.8 10.5 94 172-269 29-143 (322)
293 3is3_A 17BETA-hydroxysteroid d 65.0 31 0.0011 30.7 9.4 95 172-270 20-126 (270)
294 3tsc_A Putative oxidoreductase 64.9 33 0.0011 30.7 9.5 94 172-269 13-130 (277)
295 1nff_A Putative oxidoreductase 64.8 44 0.0015 29.5 10.3 93 172-268 9-109 (260)
296 3sx2_A Putative 3-ketoacyl-(ac 64.7 49 0.0017 29.4 10.7 92 172-269 15-127 (278)
297 1kae_A HDH, histidinol dehydro 64.4 2.7 9.3E-05 40.5 2.0 34 12-45 366-399 (434)
298 2c07_A 3-oxoacyl-(acyl-carrier 64.2 71 0.0024 28.5 11.8 94 172-269 46-150 (285)
299 3s55_A Putative short-chain de 64.2 58 0.002 29.0 11.1 94 172-269 12-128 (281)
300 2rhc_B Actinorhodin polyketide 64.1 50 0.0017 29.5 10.6 94 172-269 24-128 (277)
301 1fmc_A 7 alpha-hydroxysteroid 64.0 72 0.0025 27.6 11.7 93 172-268 13-115 (255)
302 3sju_A Keto reductase; short-c 64.0 43 0.0015 29.9 10.2 94 172-269 26-130 (279)
303 3uve_A Carveol dehydrogenase ( 63.8 32 0.0011 30.9 9.3 94 172-269 13-134 (286)
304 3qiv_A Short-chain dehydrogena 63.8 57 0.0019 28.4 10.8 94 172-269 11-118 (253)
305 3imf_A Short chain dehydrogena 63.7 59 0.002 28.5 10.9 95 172-270 8-113 (257)
306 3awd_A GOX2181, putative polyo 63.4 62 0.0021 28.2 11.0 93 172-268 15-119 (260)
307 1zk4_A R-specific alcohol dehy 63.4 58 0.002 28.2 10.8 94 172-269 8-111 (251)
308 3ucx_A Short chain dehydrogena 63.4 46 0.0016 29.4 10.2 94 172-269 13-118 (264)
309 2wsb_A Galactitol dehydrogenas 63.0 48 0.0016 28.8 10.1 94 172-269 13-114 (254)
310 3v2g_A 3-oxoacyl-[acyl-carrier 62.7 71 0.0024 28.4 11.4 99 167-270 29-139 (271)
311 3d3w_A L-xylulose reductase; u 62.7 63 0.0022 27.8 10.8 92 172-269 9-105 (244)
312 1geg_A Acetoin reductase; SDR 62.6 48 0.0016 29.1 10.1 94 172-269 4-108 (256)
313 2a4k_A 3-oxoacyl-[acyl carrier 62.3 41 0.0014 29.8 9.6 94 172-269 8-109 (263)
314 3r1i_A Short-chain type dehydr 62.2 45 0.0015 29.8 9.9 94 172-269 34-138 (276)
315 3e03_A Short chain dehydrogena 62.1 77 0.0026 28.1 11.5 94 172-269 8-119 (274)
316 3kvo_A Hydroxysteroid dehydrog 62.0 85 0.0029 29.2 12.1 94 172-269 47-158 (346)
317 3v2h_A D-beta-hydroxybutyrate 61.8 58 0.002 29.1 10.6 94 172-269 27-133 (281)
318 1ae1_A Tropinone reductase-I; 61.7 72 0.0025 28.2 11.2 94 172-269 23-128 (273)
319 3lf2_A Short chain oxidoreduct 61.2 71 0.0024 28.1 11.1 95 172-270 10-117 (265)
320 3oec_A Carveol dehydrogenase ( 61.1 71 0.0024 29.2 11.3 94 172-269 48-164 (317)
321 1cyd_A Carbonyl reductase; sho 61.0 71 0.0024 27.5 10.8 91 172-268 9-104 (244)
322 2yvq_A Carbamoyl-phosphate syn 61.0 62 0.0021 25.9 9.9 110 164-281 19-131 (143)
323 3ksu_A 3-oxoacyl-acyl carrier 60.9 77 0.0026 27.9 11.2 95 172-270 13-121 (262)
324 1iy8_A Levodione reductase; ox 60.9 67 0.0023 28.3 10.8 94 172-269 15-122 (267)
325 2z1n_A Dehydrogenase; reductas 60.5 85 0.0029 27.5 11.4 94 172-269 9-114 (260)
326 2cfc_A 2-(R)-hydroxypropyl-COM 60.3 42 0.0014 29.1 9.3 94 172-269 4-112 (250)
327 3pgx_A Carveol dehydrogenase; 60.3 41 0.0014 30.0 9.3 94 172-269 17-134 (280)
328 3zv4_A CIS-2,3-dihydrobiphenyl 60.3 46 0.0016 29.8 9.6 65 172-240 7-71 (281)
329 3ftp_A 3-oxoacyl-[acyl-carrier 59.8 60 0.0021 28.9 10.3 94 172-269 30-134 (270)
330 3ic5_A Putative saccharopine d 59.7 47 0.0016 24.6 8.4 90 172-279 7-97 (118)
331 1jak_A Beta-N-acetylhexosamini 59.2 16 0.00055 36.5 6.7 25 256-280 225-249 (512)
332 1xkq_A Short-chain reductase f 59.0 44 0.0015 29.8 9.3 94 172-269 8-119 (280)
333 1oft_A SULA, hypothetical prot 58.9 47 0.0016 27.4 8.4 80 193-279 74-156 (161)
334 3edm_A Short chain dehydrogena 58.9 67 0.0023 28.2 10.4 94 172-269 10-116 (259)
335 3ijr_A Oxidoreductase, short c 58.8 75 0.0026 28.5 10.9 95 172-270 49-156 (291)
336 3oid_A Enoyl-[acyl-carrier-pro 58.6 78 0.0027 27.8 10.8 94 172-269 6-111 (258)
337 1yb1_A 17-beta-hydroxysteroid 58.6 57 0.0019 28.9 9.9 94 172-269 33-137 (272)
338 3osu_A 3-oxoacyl-[acyl-carrier 58.5 46 0.0016 29.0 9.2 94 172-269 6-111 (246)
339 3o38_A Short chain dehydrogena 58.4 62 0.0021 28.4 10.1 95 172-270 24-131 (266)
340 1ofu_X SULA, hypothetical prot 58.0 20 0.00069 27.9 5.8 101 172-279 6-114 (119)
341 3cxt_A Dehydrogenase with diff 58.0 61 0.0021 29.2 10.1 94 172-269 36-140 (291)
342 3pk0_A Short-chain dehydrogena 57.9 68 0.0023 28.2 10.3 94 172-269 12-117 (262)
343 2gjx_A Beta-hexosaminidase alp 57.9 15 0.00051 36.6 6.2 107 165-280 96-233 (507)
344 1w6u_A 2,4-dienoyl-COA reducta 57.8 73 0.0025 28.5 10.7 94 172-269 28-133 (302)
345 3v8b_A Putative dehydrogenase, 57.7 76 0.0026 28.4 10.7 94 172-269 30-135 (283)
346 1xhl_A Short-chain dehydrogena 57.6 48 0.0016 30.0 9.3 94 172-269 28-137 (297)
347 2q2v_A Beta-D-hydroxybutyrate 57.4 75 0.0026 27.7 10.4 94 172-269 6-108 (255)
348 1edo_A Beta-keto acyl carrier 57.2 92 0.0032 26.7 11.0 94 172-269 3-108 (244)
349 1xq1_A Putative tropinone redu 56.6 91 0.0031 27.2 10.9 94 172-269 16-121 (266)
350 3afn_B Carbonyl reductase; alp 56.3 83 0.0028 27.2 10.5 94 172-269 9-115 (258)
351 3a28_C L-2.3-butanediol dehydr 56.1 55 0.0019 28.7 9.3 94 172-269 4-110 (258)
352 4egf_A L-xylulose reductase; s 55.8 84 0.0029 27.7 10.6 94 172-269 22-127 (266)
353 1zem_A Xylitol dehydrogenase; 55.7 92 0.0032 27.3 10.8 94 172-269 9-114 (262)
354 1yxm_A Pecra, peroxisomal tran 55.0 90 0.0031 28.0 10.8 94 172-269 20-129 (303)
355 2ehd_A Oxidoreductase, oxidore 54.5 75 0.0026 27.1 9.8 93 172-269 7-107 (234)
356 2bgk_A Rhizome secoisolaricire 54.4 95 0.0033 27.2 10.7 94 172-269 18-123 (278)
357 1spx_A Short-chain reductase f 54.0 59 0.002 28.8 9.3 74 172-249 8-93 (278)
358 3asu_A Short-chain dehydrogena 53.9 62 0.0021 28.3 9.2 94 172-269 2-104 (248)
359 4b79_A PA4098, probable short- 53.8 31 0.0011 30.5 7.0 91 172-270 13-106 (242)
360 3rjz_A N-type ATP pyrophosphat 53.6 95 0.0032 27.3 10.1 100 172-280 7-121 (237)
361 3uf0_A Short-chain dehydrogena 53.5 1.2E+02 0.004 26.9 11.2 93 172-269 33-135 (273)
362 2x9g_A PTR1, pteridine reducta 53.4 63 0.0022 28.9 9.4 78 172-249 25-113 (288)
363 3dqp_A Oxidoreductase YLBE; al 53.2 41 0.0014 28.6 7.7 94 172-275 2-97 (219)
364 1gee_A Glucose 1-dehydrogenase 52.8 1E+02 0.0035 26.7 10.6 94 172-269 9-114 (261)
365 3nyw_A Putative oxidoreductase 52.7 52 0.0018 28.8 8.5 94 172-269 9-115 (250)
366 2bd0_A Sepiapterin reductase; 52.5 82 0.0028 27.1 9.8 94 172-269 4-115 (244)
367 3zu3_A Putative reductase YPO4 52.0 1.1E+02 0.0036 29.4 10.8 65 172-240 49-129 (405)
368 2jl1_A Triphenylmethane reduct 51.7 64 0.0022 28.5 9.1 96 172-276 2-99 (287)
369 3tox_A Short chain dehydrogena 51.5 1E+02 0.0034 27.5 10.4 94 172-269 10-115 (280)
370 3r3s_A Oxidoreductase; structu 51.1 89 0.0031 28.1 10.0 95 172-270 51-159 (294)
371 2d1y_A Hypothetical protein TT 50.9 98 0.0034 27.0 10.1 91 172-269 8-106 (256)
372 2ph3_A 3-oxoacyl-[acyl carrier 50.9 1.2E+02 0.004 26.0 10.6 93 172-268 3-108 (245)
373 2b4q_A Rhamnolipids biosynthes 50.5 53 0.0018 29.3 8.3 93 172-269 31-134 (276)
374 3rku_A Oxidoreductase YMR226C; 50.4 73 0.0025 28.6 9.2 95 172-270 35-146 (287)
375 3gdg_A Probable NADP-dependent 50.0 77 0.0026 27.8 9.3 94 172-269 22-130 (267)
376 4imr_A 3-oxoacyl-(acyl-carrier 49.8 98 0.0034 27.5 10.0 97 172-269 35-138 (275)
377 3ezl_A Acetoacetyl-COA reducta 49.3 76 0.0026 27.6 9.1 94 172-269 15-120 (256)
378 1ja9_A 4HNR, 1,3,6,8-tetrahydr 49.3 1.1E+02 0.0037 26.8 10.2 94 172-269 23-128 (274)
379 2zat_A Dehydrogenase/reductase 48.9 1.3E+02 0.0046 26.1 10.9 94 172-269 16-121 (260)
380 3dii_A Short-chain dehydrogena 48.6 86 0.0029 27.2 9.3 93 172-269 4-104 (247)
381 3svt_A Short-chain type dehydr 48.4 76 0.0026 28.2 9.0 94 172-269 13-121 (281)
382 3gk3_A Acetoacetyl-COA reducta 47.4 1.4E+02 0.0047 26.2 10.5 94 172-269 27-132 (269)
383 3ruf_A WBGU; rossmann fold, UD 47.1 63 0.0022 29.6 8.5 100 172-276 27-143 (351)
384 3sxp_A ADP-L-glycero-D-mannohe 46.9 56 0.0019 30.3 8.1 103 172-279 12-134 (362)
385 1now_A Beta-hexosaminidase bet 46.8 29 0.001 34.5 6.2 108 163-280 100-238 (507)
386 2nu8_A Succinyl-COA ligase [AD 46.6 18 0.00062 33.0 4.4 75 202-285 51-125 (288)
387 3f1l_A Uncharacterized oxidore 46.5 1.3E+02 0.0045 26.1 10.1 97 172-270 14-123 (252)
388 1xky_A Dihydrodipicolinate syn 46.4 14 0.00049 33.9 3.7 54 226-280 26-86 (301)
389 3e2i_A Thymidine kinase; Zn-bi 46.1 28 0.00097 30.3 5.3 90 180-282 43-135 (219)
390 3l21_A DHDPS, dihydrodipicolin 46.0 38 0.0013 31.1 6.5 54 226-280 29-89 (304)
391 3u9l_A 3-oxoacyl-[acyl-carrier 45.9 1.2E+02 0.0043 27.6 10.2 94 172-269 7-116 (324)
392 3nzo_A UDP-N-acetylglucosamine 45.8 2E+02 0.0067 27.1 12.6 101 172-276 37-157 (399)
393 3i6i_A Putative leucoanthocyan 45.8 33 0.0011 31.7 6.2 96 172-280 12-116 (346)
394 2j9r_A Thymidine kinase; TK1, 45.5 37 0.0013 29.5 6.0 89 180-281 43-134 (214)
395 3dhn_A NAD-dependent epimerase 44.8 45 0.0015 28.4 6.6 95 172-275 6-103 (227)
396 3tsm_A IGPS, indole-3-glycerol 44.8 1.3E+02 0.0045 27.0 9.8 50 227-282 127-176 (272)
397 2hq1_A Glucose/ribitol dehydro 44.8 91 0.0031 26.8 8.8 75 172-250 7-91 (247)
398 1yde_A Retinal dehydrogenase/r 44.3 1.3E+02 0.0045 26.5 9.9 93 172-269 11-112 (270)
399 4gmf_A Yersiniabactin biosynth 43.9 40 0.0014 31.9 6.5 27 259-285 103-129 (372)
400 2yxg_A DHDPS, dihydrodipicolin 43.8 83 0.0028 28.5 8.5 34 172-205 71-107 (289)
401 3cpr_A Dihydrodipicolinate syn 43.7 46 0.0016 30.5 6.7 54 226-280 30-90 (304)
402 3qp9_A Type I polyketide synth 43.7 1.4E+02 0.0047 29.7 10.7 99 167-269 248-371 (525)
403 3r6d_A NAD-dependent epimerase 43.5 66 0.0023 27.2 7.5 91 172-275 7-99 (221)
404 1yo6_A Putative carbonyl reduc 43.4 1.3E+02 0.0043 25.7 9.5 94 172-269 5-111 (250)
405 3uuw_A Putative oxidoreductase 43.3 73 0.0025 28.8 8.1 48 232-285 80-127 (308)
406 1xg5_A ARPG836; short chain de 43.0 1.7E+02 0.0059 25.7 10.9 93 172-268 34-139 (279)
407 2qq5_A DHRS1, dehydrogenase/re 43.0 1.2E+02 0.0041 26.5 9.3 64 172-239 7-73 (260)
408 1mxh_A Pteridine reductase 2; 43.0 1.3E+02 0.0044 26.5 9.6 78 172-249 13-101 (276)
409 1bqc_A Protein (beta-mannanase 43.0 54 0.0018 29.7 7.1 48 207-282 37-85 (302)
410 3u5t_A 3-oxoacyl-[acyl-carrier 43.0 79 0.0027 28.0 8.2 95 172-270 29-135 (267)
411 3fkr_A L-2-keto-3-deoxyarabona 42.9 73 0.0025 29.2 8.0 88 172-284 79-175 (309)
412 2zcu_A Uncharacterized oxidore 42.8 90 0.0031 27.4 8.6 93 173-276 2-96 (286)
413 2ag5_A DHRS6, dehydrogenase/re 42.7 65 0.0022 27.9 7.5 92 172-269 8-103 (246)
414 4dry_A 3-oxoacyl-[acyl-carrier 42.7 88 0.003 27.9 8.5 95 172-270 35-142 (281)
415 4id9_A Short-chain dehydrogena 42.6 76 0.0026 29.0 8.3 90 172-276 21-118 (347)
416 1oaa_A Sepiapterin reductase; 41.9 1.4E+02 0.0046 26.0 9.5 95 172-270 8-125 (259)
417 3ozo_A N-acetylglucosaminidase 41.9 66 0.0023 32.4 8.0 25 256-280 250-274 (572)
418 1xky_A Dihydrodipicolinate syn 41.8 95 0.0032 28.3 8.6 34 172-205 83-119 (301)
419 3i1j_A Oxidoreductase, short c 41.8 1.7E+02 0.0056 25.1 10.0 97 172-270 16-125 (247)
420 2vc6_A MOSA, dihydrodipicolina 41.7 1E+02 0.0035 27.9 8.7 34 172-205 71-107 (292)
421 3a5f_A Dihydrodipicolinate syn 41.7 1E+02 0.0034 28.0 8.7 73 172-268 72-152 (291)
422 4e3z_A Putative oxidoreductase 41.6 1.8E+02 0.0062 25.4 11.1 94 172-269 28-134 (272)
423 2ojp_A DHDPS, dihydrodipicolin 41.6 1E+02 0.0034 27.9 8.7 72 172-268 72-152 (292)
424 1h5q_A NADP-dependent mannitol 41.4 1.2E+02 0.004 26.4 9.0 94 172-269 16-121 (265)
425 3flu_A DHDPS, dihydrodipicolin 41.4 40 0.0014 30.8 5.9 54 226-280 21-81 (297)
426 3tl3_A Short-chain type dehydr 40.8 34 0.0012 30.1 5.3 92 172-270 11-113 (257)
427 4iiu_A 3-oxoacyl-[acyl-carrier 40.8 1.8E+02 0.0063 25.3 11.2 94 172-269 28-133 (267)
428 4gqr_A Pancreatic alpha-amylas 40.8 18 0.00063 35.3 3.7 29 260-288 75-103 (496)
429 2pd6_A Estradiol 17-beta-dehyd 40.7 1.6E+02 0.0055 25.4 9.9 94 172-269 9-121 (264)
430 3ioy_A Short-chain dehydrogena 40.7 97 0.0033 28.3 8.6 94 172-269 10-116 (319)
431 3ctm_A Carbonyl reductase; alc 40.7 75 0.0026 28.1 7.7 74 172-249 36-118 (279)
432 1o5k_A DHDPS, dihydrodipicolin 40.5 99 0.0034 28.2 8.5 34 172-205 83-119 (306)
433 1g0o_A Trihydroxynaphthalene r 40.3 1.9E+02 0.0066 25.4 11.2 94 172-269 31-136 (283)
434 2q5c_A NTRC family transcripti 39.9 1.2E+02 0.0041 25.6 8.4 31 192-224 49-79 (196)
435 3kzv_A Uncharacterized oxidore 39.7 1.3E+02 0.0044 26.2 9.0 94 172-269 4-108 (254)
436 2pju_A Propionate catabolism o 39.5 1.9E+02 0.0064 25.1 9.7 9 312-320 167-175 (225)
437 2yl5_A Beta-N-acetylhexosamini 39.5 22 0.00076 34.7 4.0 29 252-280 85-113 (442)
438 1wma_A Carbonyl reductase [NAD 39.4 1.4E+02 0.0047 25.9 9.2 74 172-249 6-89 (276)
439 3s5o_A 4-hydroxy-2-oxoglutarat 39.2 46 0.0016 30.5 6.0 54 226-280 28-88 (307)
440 2r8w_A AGR_C_1641P; APC7498, d 39.2 55 0.0019 30.4 6.6 54 226-280 48-108 (332)
441 3tak_A DHDPS, dihydrodipicolin 39.1 46 0.0016 30.3 5.9 54 226-280 15-75 (291)
442 2r8w_A AGR_C_1641P; APC7498, d 39.0 80 0.0027 29.3 7.7 88 172-283 105-197 (332)
443 2yut_A Putative short-chain ox 38.8 96 0.0033 25.7 7.7 90 172-269 2-95 (207)
444 3edf_A FSPCMD, cyclomaltodextr 38.6 61 0.0021 32.8 7.3 29 260-288 197-225 (601)
445 2dtx_A Glucose 1-dehydrogenase 38.6 95 0.0032 27.3 7.9 86 172-269 10-103 (264)
446 2wkj_A N-acetylneuraminate lya 38.2 96 0.0033 28.3 8.0 34 172-205 82-118 (303)
447 2rfg_A Dihydrodipicolinate syn 38.1 88 0.003 28.5 7.7 87 172-282 71-162 (297)
448 3icc_A Putative 3-oxoacyl-(acy 37.9 1.9E+02 0.0066 24.8 9.9 94 172-269 9-120 (255)
449 2ojp_A DHDPS, dihydrodipicolin 37.5 51 0.0017 30.0 5.9 54 226-280 15-75 (292)
450 2wkj_A N-acetylneuraminate lya 37.4 33 0.0011 31.5 4.6 54 226-280 25-85 (303)
451 3enk_A UDP-glucose 4-epimerase 37.3 49 0.0017 30.2 5.9 101 172-276 7-121 (341)
452 3b4u_A Dihydrodipicolinate syn 37.0 47 0.0016 30.3 5.6 53 226-279 17-76 (294)
453 3dz1_A Dihydrodipicolinate syn 36.7 47 0.0016 30.6 5.6 54 226-280 22-81 (313)
454 2h7i_A Enoyl-[acyl-carrier-pro 36.7 1.2E+02 0.0042 26.6 8.4 65 172-240 9-76 (269)
455 1c7s_A Beta-N-acetylhexosamini 36.2 1E+02 0.0034 32.8 8.5 27 254-280 392-418 (858)
456 3mwd_B ATP-citrate synthase; A 36.2 73 0.0025 29.7 6.8 77 201-286 64-142 (334)
457 3bk2_A RNAse J, metal dependen 36.1 63 0.0021 32.5 6.9 97 172-276 308-423 (562)
458 1sb8_A WBPP; epimerase, 4-epim 36.1 73 0.0025 29.2 7.0 118 147-276 11-145 (352)
459 1g94_A Alpha-amylase; beta-alp 36.1 25 0.00084 34.3 3.7 31 260-290 63-93 (448)
460 2yl6_A Beta-N-acetylhexosamini 36.0 22 0.00077 34.5 3.4 28 253-280 83-110 (434)
461 3bzy_B ESCU; auto cleavage pro 35.8 19 0.00066 26.1 2.2 23 263-285 28-50 (83)
462 2nwq_A Probable short-chain de 35.6 1.8E+02 0.0061 25.7 9.3 94 172-269 23-127 (272)
463 3p19_A BFPVVD8, putative blue 35.4 62 0.0021 28.7 6.1 91 172-269 18-116 (266)
464 3i4f_A 3-oxoacyl-[acyl-carrier 35.2 1.9E+02 0.0063 25.1 9.3 94 172-269 9-116 (264)
465 3sc6_A DTDP-4-dehydrorhamnose 35.1 1.2E+02 0.004 26.8 8.0 86 172-279 7-102 (287)
466 2yv2_A Succinyl-COA synthetase 35.1 38 0.0013 31.0 4.7 77 201-286 56-133 (297)
467 3gi1_A LBP, laminin-binding pr 34.9 2.2E+02 0.0075 25.6 9.8 75 193-280 178-256 (286)
468 3qze_A DHDPS, dihydrodipicolin 34.8 43 0.0015 30.9 5.0 54 226-280 37-97 (314)
469 3si9_A DHDPS, dihydrodipicolin 34.6 46 0.0016 30.7 5.2 57 222-280 33-96 (315)
470 1lwj_A 4-alpha-glucanotransfer 34.5 32 0.0011 33.3 4.2 29 260-288 68-96 (441)
471 2z5l_A Tylkr1, tylactone synth 34.4 3.1E+02 0.011 26.9 11.6 99 167-269 256-364 (511)
472 2ya0_A Putative alkaline amylo 34.3 25 0.00086 36.6 3.7 28 261-288 254-281 (714)
473 4da9_A Short-chain dehydrogena 34.2 1.4E+02 0.0047 26.6 8.3 94 172-269 31-138 (280)
474 4aee_A Alpha amylase, catalyti 33.9 48 0.0016 34.3 5.7 29 260-288 310-338 (696)
475 1qyd_A Pinoresinol-lariciresin 33.8 1.2E+02 0.0041 27.0 8.0 95 172-275 6-107 (313)
476 3dhu_A Alpha-amylase; structur 33.7 62 0.0021 31.3 6.2 29 260-288 82-110 (449)
477 3fkr_A L-2-keto-3-deoxyarabona 33.7 37 0.0013 31.2 4.4 53 227-280 23-82 (309)
478 1h4p_A Glucan 1,3-beta-glucosi 33.6 55 0.0019 31.4 5.8 56 208-284 79-136 (408)
479 1i4n_A Indole-3-glycerol phosp 33.6 21 0.00071 31.9 2.5 50 227-282 108-157 (251)
480 3kux_A Putative oxidoreductase 33.3 79 0.0027 29.3 6.7 11 195-205 69-79 (352)
481 1ht6_A AMY1, alpha-amylase iso 33.2 34 0.0012 32.7 4.2 29 260-288 67-95 (405)
482 2yv1_A Succinyl-COA ligase [AD 33.2 27 0.00094 31.9 3.3 76 202-286 57-132 (294)
483 3qfe_A Putative dihydrodipicol 33.1 1.2E+02 0.0042 27.8 7.9 88 172-282 82-177 (318)
484 3b3e_A YVGN protein; aldo-keto 33.0 1.9E+02 0.0066 26.3 9.2 146 122-287 62-226 (310)
485 3ew7_A LMO0794 protein; Q8Y8U8 32.7 73 0.0025 26.7 6.0 92 172-274 2-93 (221)
486 3ohs_X Trans-1,2-dihydrobenzen 32.6 66 0.0023 29.6 6.0 24 195-218 68-93 (334)
487 2v9d_A YAGE; dihydrodipicolini 32.6 54 0.0018 30.7 5.3 57 222-280 42-105 (343)
488 3mfq_A TROA, high-affinity zin 32.5 90 0.0031 28.1 6.7 76 195-280 164-243 (282)
489 2fwm_X 2,3-dihydro-2,3-dihydro 32.4 1.5E+02 0.0052 25.6 8.2 87 172-269 9-103 (250)
490 1gcy_A Glucan 1,4-alpha-maltot 32.3 37 0.0013 33.8 4.4 31 260-290 91-121 (527)
491 1wza_A Alpha-amylase A; hydrol 32.2 40 0.0014 33.1 4.6 29 260-288 80-108 (488)
492 3qfe_A Putative dihydrodipicol 32.0 35 0.0012 31.6 3.8 54 226-280 25-85 (318)
493 3un1_A Probable oxidoreductase 32.0 70 0.0024 28.2 5.9 88 172-269 30-125 (260)
494 3mje_A AMPHB; rossmann fold, o 31.8 3.7E+02 0.013 26.3 12.0 95 171-269 240-349 (496)
495 4aie_A Glucan 1,6-alpha-glucos 31.6 37 0.0013 33.7 4.3 29 260-288 78-106 (549)
496 2z1k_A (NEO)pullulanase; hydro 31.3 38 0.0013 33.1 4.3 29 260-288 95-123 (475)
497 3n9k_A Glucan 1,3-beta-glucosi 31.3 62 0.0021 31.0 5.6 53 208-282 79-133 (399)
498 3ek2_A Enoyl-(acyl-carrier-pro 31.2 1.9E+02 0.0064 25.1 8.7 93 172-269 16-126 (271)
499 1xu9_A Corticosteroid 11-beta- 31.1 2.7E+02 0.0093 24.4 10.8 94 172-269 30-135 (286)
500 1mxg_A Alpha amylase; hyperthe 31.0 38 0.0013 32.8 4.2 29 260-288 85-113 (435)
No 1
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1.4e-49 Score=394.36 Aligned_cols=322 Identities=34% Similarity=0.654 Sum_probs=289.5
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+++.|+|+.|.|++++++.+.+++.+.+.+....|++..|..+||+++++++.+.+|..++++ +|++|+|+++++.+++
T Consensus 30 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~g~~~al~~~~ 108 (385)
T 1b5p_A 30 GVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPE-ETIVTVGGSQALFNLF 108 (385)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGG-GEEEESHHHHHHHHHH
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChH-HEEEcCChHHHHHHHH
Confidence 357899999999988889999999888877667899988999999999999999899888888 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
.+++++||+|++++|+|..+...++..|++++.+++++ +++.+|++.+++++++++++|++++||||||.+++.+++++
T Consensus 109 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~ 188 (385)
T 1b5p_A 109 QAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEA 188 (385)
T ss_dssp HHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999985 46889999999999888999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~ 346 (434)
|+++|++||++||+||+|.++.+++...++..+.. ++++++.||||.+|++|+|+||+++++++++.++..+...+++
T Consensus 189 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~~~~ 266 (385)
T 1b5p_A 189 LARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAP--EHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTS 266 (385)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCT--TTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCS
T ss_pred HHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCC--CCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhhccCC
Confidence 99999999999999999999988764345555533 7899999999999999999999999999999998887777788
Q ss_pred CchHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhc
Q 013883 347 TSTPMQWAATAALRA---PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEV 423 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~ 423 (434)
++.+.|.++..+|+. ..+++++++++++++++.+.+.|+++|+.+.++++++|+|+++...+. +..+++++|+ ++
T Consensus 267 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~-~~ 344 (385)
T 1b5p_A 267 PDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAP-DEVRAAERLL-EA 344 (385)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTCS-SHHHHHHHHH-HT
T ss_pred CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecCCCCC-CHHHHHHHHH-HC
Confidence 999999999999986 567888999999999999999999889998899999999998753333 5778999887 66
Q ss_pred CeEEECCCCCC
Q 013883 424 GVVAIPTSVFY 434 (434)
Q Consensus 424 GV~v~pG~~F~ 434 (434)
||.+.||+.|+
T Consensus 345 gv~v~~g~~f~ 355 (385)
T 1b5p_A 345 GVAVVPGTDFA 355 (385)
T ss_dssp TEECEESGGGT
T ss_pred CeEEecccccC
Confidence 99999998773
No 2
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-49 Score=402.53 Aligned_cols=327 Identities=36% Similarity=0.701 Sum_probs=291.3
Q ss_pred hcCCeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 107 IKHGAINLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 107 ~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
.+++.|||+.|.|++++++.+.+++.+++.+ ....|++..|..+||+++++++.+.+|..++++ +|++|+|+++++.+
T Consensus 55 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t~G~~~al~~ 133 (447)
T 3b46_A 55 QGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAE-NVTVTTGANEGILS 133 (447)
T ss_dssp TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGG-GEEEESHHHHHHHH
T ss_pred cCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChh-hEEEeCCHHHHHHH
Confidence 3457899999999999999999999998876 456899999999999999999998889888888 89999999999999
Q ss_pred HHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-----------CCCCCHHHHHhhcccCCcEEEecCCCCC
Q 013883 186 TILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-----------DFAIPIEELKSTISKNTRAILMNTPHNP 254 (434)
Q Consensus 186 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-----------~~~~d~~~l~~~i~~~~~~i~~~~p~NP 254 (434)
++.+++++||+|++++|+|+.+...++..|++++.+|++++ ++.+|++.|++++++++++|++++||||
T Consensus 134 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 213 (447)
T 3b46_A 134 CLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNP 213 (447)
T ss_dssp HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCTT
T ss_pred HHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCCCC
Confidence 99999999999999999999999999999999999998754 5789999999999888999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCC-CCCCCceEEEccCChhhccccceeeeEEe-Chhh
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASL-PGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHL 332 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~-~~~~~~~i~i~S~SK~~g~~G~R~G~~~~-~~~~ 332 (434)
||.+++.+++++|+++|++||++||+||+|.++.+++...++..+ .+..++++++.|+||.+|++|+|+||+++ ++++
T Consensus 214 tG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l 293 (447)
T 3b46_A 214 IGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAEL 293 (447)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHH
T ss_pred CCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHH
Confidence 999999999999999999999999999999999987744455554 22357899999999999999999999999 9999
Q ss_pred HHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCC--
Q 013883 333 TWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFG-- 408 (434)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-- 408 (434)
++.+.......+++.+.+.|.++..+|+.. ++++++++++++++++.+.+.|+++|+.+..+++++|+|+++....
T Consensus 294 ~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p 373 (447)
T 3b46_A 294 LSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIP 373 (447)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCCCC
T ss_pred HHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccccCc
Confidence 999888777678899999999999999875 5678899999999999999999998999988999999999886421
Q ss_pred -----------CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 409 -----------HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 409 -----------~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
..++.+++++|++++||.+.||+.||
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 410 (447)
T 3b46_A 374 EDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFY 410 (447)
T ss_dssp TTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGS
T ss_pred cccccccccccCCCHHHHHHHHHHhCCEEEECchHhC
Confidence 12466899889877899999998774
No 3
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=3e-49 Score=393.77 Aligned_cols=335 Identities=15% Similarity=0.119 Sum_probs=269.5
Q ss_pred hhhhccCCchHHHHHhhhccccHHHHHHHHhhcCCeeEeCCCC-CC----CCCcHHHHHHHHHHH-H-cCCCCCCCCCCc
Q 013883 76 TIQKTNLQPQQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGF-PN----FDGPDFVKDAAIQAI-R-DGKNQYARGHGV 148 (434)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~-p~----~~~~~~v~~~~~~~~-~-~~~~~Y~~~~G~ 148 (434)
+...+....+.+.+++++.+. +++|||++|. |+ +++++.+.++.. .+ . ...++|.+..|.
T Consensus 8 ~~~~~~~~i~~~~~~~~~~~~------------~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~ 74 (405)
T 3k7y_A 8 LENIEVDNILKTAREFKEDTC------------EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGT 74 (405)
T ss_dssp CCCCCCCHHHHHHHHHTTSSC------------SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSC
T ss_pred CCCCCCChHHHHHHHHhcCCC------------cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCc
Confidence 333344455677777765443 3889999995 23 335678888776 43 3 346789999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCC-cEEEcCChHHHHHHHHHHccC--CCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC-
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEK-EVTVTSGCTEAIAATILGLIN--PGDEVILFAPFYDSYEATLSMAGAKIKCITLR- 224 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~-~i~~t~G~~~ai~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~- 224 (434)
++||+++++++.+.++..+++++ +|++|+|+++++.+++..+++ | |+|++++|+|.+|..+++..|++++.+|+.
T Consensus 75 ~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~ 153 (405)
T 3k7y_A 75 EDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFD 153 (405)
T ss_dssp HHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEE
T ss_pred HHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccc
Confidence 99999999999877777677763 359999999999999999987 9 999999999999999999999999999984
Q ss_pred CCCCCCCHHHHHhhccc--CCcEEEecCC-CCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC---CccccC
Q 013883 225 PPDFAIPIEELKSTISK--NTRAILMNTP-HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD---HISIAS 298 (434)
Q Consensus 225 ~~~~~~d~~~l~~~i~~--~~~~i~~~~p-~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~---~~~~~~ 298 (434)
++++++|++.+++++++ +++++++++| |||||.+++.+++++|+++|++||++||+||+|.+|.+++. ..++..
T Consensus 154 ~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~ 233 (405)
T 3k7y_A 154 YNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRK 233 (405)
T ss_dssp TTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHH
T ss_pred cccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHH
Confidence 44689999999999874 5678888765 99999999999999999999999999999999999988642 123333
Q ss_pred CCCCCCceEEEccCChhhccccceeeeEEe---ChhhHHHH----HHHhhccccCCchHHHHHHHHHHhCC------hHH
Q 013883 299 LPGMYERTVTMNSLGKTFSLTGWKIGWAIA---PPHLTWGV----RQAHSFLTFATSTPMQWAATAALRAP------ETY 365 (434)
Q Consensus 299 ~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~---~~~~~~~l----~~~~~~~~~~~~~~~q~a~~~~L~~~------~~~ 365 (434)
+....+++++++||||.|+++|+|+||+++ ++++++.+ ....+....+++.++|.++..+|++. .++
T Consensus 234 ~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~ 313 (405)
T 3k7y_A 234 FEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKE 313 (405)
T ss_dssp HHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHH
Confidence 333457999999999999999999999864 56555443 44444455667889999999999874 234
Q ss_pred HHHHHHHHHHHHHHHHHHhh----hCC----CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 366 YEELKRDYSAKKAILVEGLN----AVG----FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~L~----~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+++++++|+++|+.+.+.|+ ++| |.+.+++||||+|++++. +++++| +++||+++||..
T Consensus 314 l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~-------~~~~~L-~~~gV~v~p~~R 380 (405)
T 3k7y_A 314 LSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA-------KIAEHL-KTHHIYIINNGR 380 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG-------GGTTTT-TTTTEECCTTSE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH-------HHHHHH-HHCCEeecCCCe
Confidence 66778889999999999999 776 788899999999998732 566777 888999999864
No 4
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.9e-48 Score=390.38 Aligned_cols=342 Identities=39% Similarity=0.715 Sum_probs=300.4
Q ss_pred hhccccHHHHHHHHhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCC--CCCCCCCCcHHHHHHHHHHHHhhcCCCCCC
Q 013883 92 EKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGK--NQYARGHGVPEFNSAIASRFKKDSGLEVDP 169 (434)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~ 169 (434)
++.+.+.+.++.+...+++.|+|+.|.|++++++.+.+++.+++.++. ..|++..|..++|+++++++++.+|.++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~ 90 (422)
T 3fvs_A 11 DGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDP 90 (422)
T ss_dssp TTCCCCHHHHHHHHHHTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCH
T ss_pred hccCccHHHHHHHHhhcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC
Confidence 344444555555556667899999999999999999999999988753 689998899999999999999999998888
Q ss_pred -CCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-----------CCCCCCHHHHHh
Q 013883 170 -EKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-----------PDFAIPIEELKS 237 (434)
Q Consensus 170 -~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-----------~~~~~d~~~l~~ 237 (434)
+ +|++|+|+++++..++..++++||+|+++.|+|.++...+...|.+++.+++++ .++.+|++.+++
T Consensus 91 ~~-~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~ 169 (422)
T 3fvs_A 91 LR-NVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAG 169 (422)
T ss_dssp HH-HEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHT
T ss_pred CC-cEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHh
Confidence 6 899999999999999999999999999999999999999999999999999875 245689999999
Q ss_pred hcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhh
Q 013883 238 TISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTF 316 (434)
Q Consensus 238 ~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~ 316 (434)
++++++++|++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..++..+....++++++.|+||.+
T Consensus 170 ~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 249 (422)
T 3fvs_A 170 KFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTF 249 (422)
T ss_dssp TCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHH
T ss_pred hcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhcc
Confidence 9998999999999999999999999999999999999999999999999998764 445666655568899999999999
Q ss_pred ccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhC-------ChHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 013883 317 SLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRA-------PETYYEELKRDYSAKKAILVEGLNAVGF 389 (434)
Q Consensus 317 g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~-------~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 389 (434)
|++|+|+||+++++++++.+........++.+.+.|.++..+|++ .++++++++++++++++.+.+.|++.|+
T Consensus 250 g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 329 (422)
T 3fvs_A 250 SATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGL 329 (422)
T ss_dssp TCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCccceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999998888777889999999999999974 3568899999999999999999999999
Q ss_pred EeecCCeeEEEeeecCCCC--CCC---------HHHHHHHHHHhcCeEEECCCCCC
Q 013883 390 KVFPSSGTYFVVVDHTPFG--HET---------DIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
.+..+++++|+|+++...+ ..+ +.+++.+|++++||.+.||+.|+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~ 385 (422)
T 3fvs_A 330 KPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFY 385 (422)
T ss_dssp EEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGS
T ss_pred eecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhc
Confidence 9999999999999874311 101 55888888888899999998874
No 5
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=4e-48 Score=386.43 Aligned_cols=340 Identities=41% Similarity=0.743 Sum_probs=297.7
Q ss_pred ccccHHHHHHHHhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCC-CC
Q 013883 94 FKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDP-EK 171 (434)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~ 171 (434)
.+...+..+.+...++++|+|+.|.|++++++.+.+++.+++.+. ...|++..|..++|+++++++++.+|.++++ +
T Consensus 8 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~- 86 (410)
T 3e2y_A 8 LDSNVWVEFTKLAADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNE- 86 (410)
T ss_dssp CCCCHHHHTTTTTTSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTT-
T ss_pred CCccHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCC-
Confidence 333444444444555689999999999999999999999988764 4589998899999999999999999998888 6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC----------CCCCCCHHHHHhhccc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP----------PDFAIPIEELKSTISK 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~----------~~~~~d~~~l~~~i~~ 241 (434)
+|++++|+++++..++..++++||+|+++.|+|..+...+...|.+++.+++++ .++.+|++.+++++++
T Consensus 87 ~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~ 166 (410)
T 3e2y_A 87 EILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS 166 (410)
T ss_dssp SEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT
T ss_pred CEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCC
Confidence 899999999999999999999999999999999999999999999999999863 3466899999999998
Q ss_pred CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhcccc
Q 013883 242 NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTG 320 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G 320 (434)
++++|++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..++..+....++++++.||||.+|++|
T Consensus 167 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G 246 (410)
T 3e2y_A 167 KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTG 246 (410)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGG
T ss_pred CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCC
Confidence 999999999999999999999999999999999999999999999998764 3456666655688999999999999999
Q ss_pred ceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhC-------ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeec
Q 013883 321 WKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRA-------PETYYEELKRDYSAKKAILVEGLNAVGFKVFP 393 (434)
Q Consensus 321 ~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~-------~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 393 (434)
+|+||+++++++++.++......+++.+.+.|.++..+|++ .++++++++++++++++.+.+.|+++|+.+..
T Consensus 247 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 326 (410)
T 3e2y_A 247 WKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIV 326 (410)
T ss_dssp GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEB
T ss_pred ceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecC
Confidence 99999999999999998888777889999999999999973 35688999999999999999999999999999
Q ss_pred CCeeEEEeeecCCCCC--C-------CHHHHHHHHHHhcCeEEECCCCCC
Q 013883 394 SSGTYFVVVDHTPFGH--E-------TDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 394 ~~~~~~~~~~~~~~~~--~-------~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+++++|+|+++..... . ++.+++.++++++||.+.||+.|+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~ 376 (410)
T 3e2y_A 327 PDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFC 376 (410)
T ss_dssp CSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGS
T ss_pred CCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhC
Confidence 9999999998754321 1 134888888888899999998874
No 6
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=1.9e-47 Score=378.83 Aligned_cols=327 Identities=39% Similarity=0.738 Sum_probs=288.3
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
..+.|+|+.|.+++++++.+.+++.+++.+....|.+..|..+||+++++++.+.+|.+++++.+|++|+|+++++.+++
T Consensus 29 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~ 108 (386)
T 1u08_A 29 QHQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAI 108 (386)
T ss_dssp HTTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHH
T ss_pred cCCeEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHH
Confidence 34789999999988888999999999887756789988899999999999999888877766526999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
.+++++||+|++++|+|+++...++..|++++.+|++++++.+|++.+++++++++++|++++||||||.+++.+++++|
T Consensus 109 ~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i 188 (386)
T 1u08_A 109 TALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAAL 188 (386)
T ss_dssp HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHH
Confidence 99999999999999999999999999999999999986568899999999998889999999999999999999999999
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~ 346 (434)
+++|++||+++|+||+|.++.+++. ..++..+....++++++.|+||.+|++|+|+||+++++++++.++......+++
T Consensus 189 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 268 (386)
T 1u08_A 189 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFS 268 (386)
T ss_dssp HHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHHhhccC
Confidence 9999999999999999999988653 334444422356899999999999999999999999999999888877666788
Q ss_pred CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 347 TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
.+.+.|.++..+|+..++++++++++++++++.+.+.|++.|+.+.++++++|+|+++...+..+..+++++|++++||.
T Consensus 269 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 348 (386)
T 1u08_A 269 VNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVA 348 (386)
T ss_dssp CCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEE
T ss_pred CChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEE
Confidence 89999999999998767789999999999999999999999999988889999999875432125778988888778999
Q ss_pred EECCCCCC
Q 013883 427 AIPTSVFY 434 (434)
Q Consensus 427 v~pG~~F~ 434 (434)
+.||+.|+
T Consensus 349 v~~g~~f~ 356 (386)
T 1u08_A 349 AIPLSVFC 356 (386)
T ss_dssp CEEGGGGC
T ss_pred EeCchHhC
Confidence 99998763
No 7
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=6.3e-47 Score=375.31 Aligned_cols=343 Identities=32% Similarity=0.602 Sum_probs=297.1
Q ss_pred HHhhhccccHHHHHHHHhhc-CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC
Q 013883 89 KRLEKFKTTIFTQMSMLAIK-HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEV 167 (434)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~ 167 (434)
.++...+......+.+.... ++.|+|+.|.+++++++.+.+++.+++.+....|++..|..+||+++++++.+.+|..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~ 84 (389)
T 1gd9_A 5 DRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEA 84 (389)
T ss_dssp HHHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCC
T ss_pred hHhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Confidence 34444444444444444333 47899999999888889999999998877667899888999999999999998888877
Q ss_pred CCCCc-EEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcE
Q 013883 168 DPEKE-VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRA 245 (434)
Q Consensus 168 ~~~~~-i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~ 245 (434)
+++ + |++|+|+++++..++.+++++||+|++++|+|+++...++..|++++.+|+++ .++.+|++.+++++++++++
T Consensus 85 ~~~-~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 163 (389)
T 1gd9_A 85 DPK-TEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRA 163 (389)
T ss_dssp CTT-TSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEE
T ss_pred CCC-CeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceE
Confidence 887 8 99999999999999999999999999999999999999999999999999875 35789999999999888999
Q ss_pred EEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceee
Q 013883 246 ILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIG 324 (434)
Q Consensus 246 i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G 324 (434)
|++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..++..+.+..++++++.|+||.+|++|+|+|
T Consensus 164 v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 243 (389)
T 1gd9_A 164 LIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLG 243 (389)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCE
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceE
Confidence 99999999999999999999999999999999999999999988765 44555554435789999999999999999999
Q ss_pred eEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEee
Q 013883 325 WAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPET--YYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVV 402 (434)
Q Consensus 325 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 402 (434)
|+++++++++.++.......++.+.+.|.++..+|+...+ ++++++++++++++.+.+.|++.|+++.++++++++|+
T Consensus 244 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 323 (389)
T 1gd9_A 244 FVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFP 323 (389)
T ss_dssp EEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECC
T ss_pred EEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEE
Confidence 9999999999998877777788999999999999987555 78899999999999999999999999888899999998
Q ss_pred ecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 403 DHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 403 ~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
++...+. +..+++++|++++||.+.||..|
T Consensus 324 ~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~~ 353 (389)
T 1gd9_A 324 RIRDTGL-TSKKFSELMLKEARVAVVPGSAF 353 (389)
T ss_dssp BCGGGTC-CHHHHHHHHHHHTCEECEEGGGG
T ss_pred eccCCCC-CHHHHHHHHHHhCCEEEeCchhh
Confidence 8753233 57789999886779999999766
No 8
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=8.5e-47 Score=374.79 Aligned_cols=318 Identities=23% Similarity=0.411 Sum_probs=277.8
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+++.|||+.|.++++.++.+.+++.+++.+....|.+..|..+||+++++++++.+|..++++ +|++|+|+++++.+++
T Consensus 30 g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~v~~t~g~~~al~~~~ 108 (391)
T 3h14_A 30 GRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPG-RVVITPGSSGGFLLAF 108 (391)
T ss_dssp TCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGG-GEEEESSHHHHHHHHH
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHH-HEEEecChHHHHHHHH
Confidence 347899999999999999999999998877667899998999999999999999999888888 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
.+++++||+|++++|+|.++...++..|++++.++++++ ++.+|++.++++ ++++|++++||||||.+++.+++++
T Consensus 109 ~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~~l~~ 185 (391)
T 3h14_A 109 TALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGA 185 (391)
T ss_dssp HHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---CCeEEEECCCCCCCCccCCHHHHHH
Confidence 999999999999999999999999999999999999853 478899999887 7899999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~ 346 (434)
|+++|++||+++|+||+|.++.+++.......+ .+++++++|+||.+|++|+|+||+++++++++.++......+++
T Consensus 186 l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~---~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 262 (391)
T 3h14_A 186 LIEAAQAQGASFISDEIYHGIEYEAKAVTALEL---TDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQNMFIC 262 (391)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGT---CSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCEEEEECcchhcccCCCCcChhhc---CCCEEEEEechhccCCccceeEEEEeCHHHHHHHHHHHhhhccC
Confidence 999999999999999999999988754444433 57889999999999999999999999999999999888878889
Q ss_pred CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEe-ecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCe
Q 013883 347 TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKV-FPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGV 425 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV 425 (434)
.+.+.|.++.++|+ ..+++++.+++++++++.+.+.|++.|+.. .++++++++|+++...+. +..+++++|++++||
T Consensus 263 ~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~gi 340 (391)
T 3h14_A 263 APHASQVAALAALD-CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTD-DSRAFAAEILEKAGV 340 (391)
T ss_dssp CCHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCS-CHHHHHHHHHHHHCE
T ss_pred CCHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCC-CHHHHHHHHHHHCCE
Confidence 99999999989998 577899999999999999999999887664 578889999998754333 578899999888899
Q ss_pred EEECCCCCC
Q 013883 426 VAIPTSVFY 434 (434)
Q Consensus 426 ~v~pG~~F~ 434 (434)
.+.||+.|+
T Consensus 341 ~v~~g~~~~ 349 (391)
T 3h14_A 341 AVTPGLDFD 349 (391)
T ss_dssp ECEEGGGTC
T ss_pred EEcCchhhC
Confidence 999998774
No 9
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.9e-47 Score=379.20 Aligned_cols=341 Identities=44% Similarity=0.782 Sum_probs=295.5
Q ss_pred hccccHHHHHHHHhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCc
Q 013883 93 KFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKE 172 (434)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~ 172 (434)
..+...+..+.+.....+.|||+.|.+++++++.+.+++.+++.+....|.+..|..+||+++++++.+.+|.+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~ 88 (411)
T 2o0r_A 9 PYATTVFAEMSALATRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETE 88 (411)
T ss_dssp GGSSCHHHHHHHHHHTTTCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTS
T ss_pred hcCccHHHHHHHHhhcCCeeeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCce
Confidence 33444455555555556889999999988888999999999987756789998899999999999999888877776436
Q ss_pred EEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC--CCCCCHHHHHhhcccCCcEEEecC
Q 013883 173 VTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP--DFAIPIEELKSTISKNTRAILMNT 250 (434)
Q Consensus 173 i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~--~~~~d~~~l~~~i~~~~~~i~~~~ 250 (434)
|++|+|+++++.+++.+++++||+|++++|+|+++...+...|++++.+|++++ ++.+|++.+++++++++++|++++
T Consensus 89 v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~ 168 (411)
T 2o0r_A 89 VLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINS 168 (411)
T ss_dssp EEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEES
T ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeC
Confidence 999999999999999999999999999999999999999999999999998753 467999999999988899999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeC
Q 013883 251 PHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 251 p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
|+||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..++..+....++++++.|+||.+|++|+|+||++++
T Consensus 169 ~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 248 (411)
T 2o0r_A 169 PHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGP 248 (411)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeC
Confidence 999999999999999999999999999999999999988653 3455555444578999999999999999999999999
Q ss_pred hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCC
Q 013883 330 PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGH 409 (434)
Q Consensus 330 ~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 409 (434)
+++++.+.......+++.+.+.|.++..+|+..++++++++++++++++.+.+.|++.|+.+.++++++|+|+++...+.
T Consensus 249 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~ 328 (411)
T 2o0r_A 249 AELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFAVHDSYGTYFLCADPRPLGY 328 (411)
T ss_dssp HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCCBSSEEEEECGGGTC
T ss_pred HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCEecCCCeeEEEEEecCCCCC
Confidence 99999888877666788888999999999986677899999999999999999999889999888999999998854321
Q ss_pred CCHHHHHHHHHHhcCeEEECCCCC
Q 013883 410 ETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 410 ~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
.+..+++++|++++||.+.||+.|
T Consensus 329 ~~~~~~~~~l~~~~gi~v~~g~~f 352 (411)
T 2o0r_A 329 DDSTEFCAALPEKVGVAAIPMSAF 352 (411)
T ss_dssp CCHHHHHHHHHHHHSEECEEGGGG
T ss_pred CCHHHHHHHHHHhCCEEEcChhhh
Confidence 257789998887779999999876
No 10
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.4e-46 Score=376.10 Aligned_cols=324 Identities=24% Similarity=0.452 Sum_probs=279.9
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCC-CCcEEEcCChHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDP-EKEVTVTSGCTEAIAA 185 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~~i~~t~G~~~ai~~ 185 (434)
+.+.|||+.|.+++++++.+.+++.+++.+. .+.|++..|..+||+++++++.+.+|.++++ + +|++|+|+++++.+
T Consensus 36 g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~-~v~~t~g~~~a~~~ 114 (412)
T 2x5d_A 36 GEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPES-EAIVTIGSKEGLAH 114 (412)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTT-SEEEESCHHHHHHH
T ss_pred CCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCc-CEEEcCChHHHHHH
Confidence 4578999999998888899999998887654 4679888899999999999999888887777 6 89999999999999
Q ss_pred HHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHH
Q 013883 186 TILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 186 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
++.+++++||+|++++|+|+++...++..|++++.+|++++ ++.+|++.+++++++++++|++++||||||.+++.+++
T Consensus 115 ~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l 194 (412)
T 2x5d_A 115 LMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFF 194 (412)
T ss_dssp HHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHH
T ss_pred HHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHH
Confidence 99999999999999999999999999999999999998864 44578999999998889999999999999999999999
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 343 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~ 343 (434)
++|+++|++||+++|+||+|.++.+++. ..++..+....++++++.|+||.+|++|+|+||+++++++++.+.......
T Consensus 195 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~ 274 (412)
T 2x5d_A 195 ERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYH 274 (412)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHHHHHhhh
Confidence 9999999999999999999999988653 445555543357899999999999999999999999999999998877766
Q ss_pred ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCC--CCHHHHHHHHHH
Q 013883 344 TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGH--ETDIAFCEYLIK 421 (434)
Q Consensus 344 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Ll~ 421 (434)
+++.+.+.|.++..+|+..++++++++++++++++.+.+.|++.|+.+.++++++|+|++++. +. .+..+++++|++
T Consensus 275 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~l~~ 353 (412)
T 2x5d_A 275 DYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPE-PYAHLGSLEFAKKLLQ 353 (412)
T ss_dssp CCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCSBSSEEEEECCT-TTGGGCHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCeeeEEEEEcCC-ccCCCCHHHHHHHHHH
Confidence 788999999999999998677899999999999999999999889988888999999998742 21 146789999887
Q ss_pred hcCeEEECCCCC
Q 013883 422 EVGVVAIPTSVF 433 (434)
Q Consensus 422 ~~GV~v~pG~~F 433 (434)
++||.+.||+.|
T Consensus 354 ~~gi~v~~g~~f 365 (412)
T 2x5d_A 354 DAKVSVSPGIGF 365 (412)
T ss_dssp HHCEECEEGGGG
T ss_pred HCCEEEeCchhh
Confidence 779999999766
No 11
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=2.9e-46 Score=370.45 Aligned_cols=324 Identities=28% Similarity=0.572 Sum_probs=287.1
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+++.|||+.|.|+++.++.+.+++.+++.+....|++..|..+||+++++++.+.+|.+++++ +|++|+|+++++..++
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~-~v~~~~g~~~a~~~~~ 107 (388)
T 1j32_A 29 GIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGAD-NILVTNGGKQSIFNLM 107 (388)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEESHHHHHHHHHH
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChh-hEEEcCCHHHHHHHHH
Confidence 347899999999888889999999998877667899988999999999999998889888888 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
++++++||+|++++|+|+++...++..|++++.++.++ .++.+|++.+++++++++++|++++|+||||.+++.+++++
T Consensus 108 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~ 187 (388)
T 1j32_A 108 LAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRA 187 (388)
T ss_dssp HHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHH
Confidence 99999999999999999999999999999999999875 35789999999999888999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCC-CCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPG-MYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT 344 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~ 344 (434)
|+++|++||+++|+||+|.++.+++. ..++..+.. ..++++++.|+||.+|++|+|+||+++++++++.++......+
T Consensus 188 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~ 267 (388)
T 1j32_A 188 IAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKIQGHST 267 (388)
T ss_dssp HHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHHHHHHHHHHhhcc
Confidence 99999999999999999999988663 234444432 1457899999999999999999999999999999988877778
Q ss_pred cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhc
Q 013883 345 FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEV 423 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~ 423 (434)
++.+.+.|.++..+|+..++++++++++++++++.+.+.|+++ |+.+..+++++++|+++...+. +..+++++|++++
T Consensus 268 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~ 346 (388)
T 1j32_A 268 SNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGR-SSLDFCSELLDQH 346 (388)
T ss_dssp CSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGGTC-CHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEEEEEecCCCCC-CHHHHHHHHHHhC
Confidence 8899999999999998767789999999999999999999987 8998888999999987743232 5778999998767
Q ss_pred CeEEECCCCC
Q 013883 424 GVVAIPTSVF 433 (434)
Q Consensus 424 GV~v~pG~~F 433 (434)
||.+.||..|
T Consensus 347 gi~v~~g~~~ 356 (388)
T 1j32_A 347 QVATVPGAAF 356 (388)
T ss_dssp CEECEEGGGG
T ss_pred CEEEeChhhh
Confidence 9999999766
No 12
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=4.4e-46 Score=369.99 Aligned_cols=321 Identities=22% Similarity=0.354 Sum_probs=283.1
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLE-VDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~-~~~~~~i~~t~G~~~ai~~~ 186 (434)
+++.|||+.|.|++++++.+.+++.+.+. ....|++..|..+||+++++++.+.+|.+ ++++++|++|+|+++++.++
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~ 107 (396)
T 3jtx_A 29 GMEAVPLHIGEPKHPTPKVITDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSF 107 (396)
T ss_dssp TCCCEECSCCSCCSCCCHHHHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHH
T ss_pred CCCeEEeCCcCCCCCCCHHHHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHH
Confidence 45789999999999999999999988875 45789999999999999999999998977 66653699999999999999
Q ss_pred HHHccCCC-----CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCH
Q 013883 187 ILGLINPG-----DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTR 261 (434)
Q Consensus 187 ~~~l~~~g-----d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~ 261 (434)
+.+++++| |+|+++.|+|.++...+...|++++.++++++++.+|++.+++++++++++|++++||||||.+++.
T Consensus 108 ~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 187 (396)
T 3jtx_A 108 VQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDL 187 (396)
T ss_dssp HHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCH
Confidence 99999997 7999999999999999999999999999966677899999999998899999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccC----CCCCCCceEEEccCChhhccccceeeeEEeChhhHHHH
Q 013883 262 EELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIAS----LPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV 336 (434)
Q Consensus 262 e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~----~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l 336 (434)
+++++|+++|++||+++|+||+|.++.+++. ...... +....++++++.||||.++++|+|+||+++++++++.+
T Consensus 188 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 267 (396)
T 3jtx_A 188 DGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNF 267 (396)
T ss_dssp HHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHH
Confidence 9999999999999999999999999988762 222211 12235789999999999999999999999999999999
Q ss_pred HHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHH
Q 013883 337 RQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFC 416 (434)
Q Consensus 337 ~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (434)
.......+++.+.+.|.++..+|++ ++++++++++++++++.+.+.|++. +.+..+++++|+|+++.. .++.+++
T Consensus 268 ~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~ 342 (396)
T 3jtx_A 268 LLYRTYHGSAMSIPVQRASIAAWDD-EQHVIDNRRLYQEKFERVIPILQQV-FDVKLPDASFYIWLKVPD---GDDLAFA 342 (396)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHTTT-SCCCCCSSSSEEEEECTT---SCHHHHH
T ss_pred HHHHhhcccCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhc-CCccCCCeeEEEEEECCC---CCHHHHH
Confidence 8887777788999999999999987 6688999999999999999999887 666788899999998854 2578899
Q ss_pred HHHHHhcCeEEECCCCCC
Q 013883 417 EYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 417 ~~Ll~~~GV~v~pG~~F~ 434 (434)
++|++++||.+.||+.|+
T Consensus 343 ~~l~~~~gi~v~~g~~~~ 360 (396)
T 3jtx_A 343 RNLWQKAAIQVLPGRFLA 360 (396)
T ss_dssp HHHHHHHCEECEEGGGGC
T ss_pred HHHHHHCCEEEeCChHhC
Confidence 999888899999998763
No 13
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=4.9e-46 Score=376.31 Aligned_cols=339 Identities=21% Similarity=0.364 Sum_probs=291.9
Q ss_pred HHHHhhhccccHHHHHHHHhhcCCeeEeCCCCCCCC--CcHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHh
Q 013883 87 VAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFD--GPDFVKDAAIQAIRDG---KNQYARGHGVPEFNSAIASRFKK 161 (434)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~--~~~~v~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~ 161 (434)
++++..+.+.+.+.++.+....+++|||+.|.|+.. +++.+.+++.+++++. ...|.+..|..+||+++++++.+
T Consensus 54 ~s~~~~~~~~s~~~~~~~~~~~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 133 (448)
T 3aow_A 54 FSKKALEMRASEVRELLKLVETSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGK 133 (448)
T ss_dssp CCHHHHHCCCCHHHHHHHHHHTSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhHHHhcCCCcHHHHHHHhccCCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHH
Confidence 344555555666666666666778999999988754 6778888888887653 25799989999999999999987
Q ss_pred hcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc-
Q 013883 162 DSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS- 240 (434)
Q Consensus 162 ~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~- 240 (434)
.+|.+ +++ +|++|+|+++++.+++.+++++||+|++++|+|.++...++..|++++.+|.++ .++|++.|+++++
T Consensus 134 ~~g~~-~~~-~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~--~g~d~~~L~~~l~~ 209 (448)
T 3aow_A 134 RYGIS-QDN-DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDD--EGMKVEILEEKLKE 209 (448)
T ss_dssp HHCCC-TTS-EEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEET--TEECHHHHHHHHHH
T ss_pred hcCcC-Chh-hEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCC--CCCCHHHHHHHHhh
Confidence 88876 777 899999999999999999999999999999999999999999999999999875 2589999999997
Q ss_pred ---c--CCcEE-EecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCC
Q 013883 241 ---K--NTRAI-LMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLG 313 (434)
Q Consensus 241 ---~--~~~~i-~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~S 313 (434)
+ ++++| ++++|+||||.+++.+++++|+++|++||++||+||+|.++.+++. ..++..+. ..++++++.|||
T Consensus 210 ~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~-~~~~vi~~~S~S 288 (448)
T 3aow_A 210 LKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALD-NEGRVIYLGTFS 288 (448)
T ss_dssp HHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGC-TTSCEEEEEEST
T ss_pred hhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcC-CCCCEEEEccch
Confidence 5 78887 4689999999999999999999999999999999999999998764 34455553 346899999999
Q ss_pred hhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhC---C
Q 013883 314 KTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAV---G 388 (434)
Q Consensus 314 K~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~---g 388 (434)
|.++ +|+|+||+++++++++.+.......+++.+.+.|.++..+|++. +++++++++.++++++.+.+.|++. |
T Consensus 289 K~~~-~GlriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g 367 (448)
T 3aow_A 289 KILA-PGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEG 367 (448)
T ss_dssp TTTC-GGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred hhcc-ccccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999 99999999999999999988777667888999999999999985 5788999999999999999999874 7
Q ss_pred CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 389 FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+.+..+++++|+|++++. +. +..+++++|+++ ||.+.||..|+
T Consensus 368 ~~~~~p~~g~~~~v~~~~-~~-~~~~l~~~l~~~-gV~v~pg~~f~ 410 (448)
T 3aow_A 368 VKWTKPEGGMFIWVTLPD-GI-DSKKMLERAIKK-GVAYVPGEAFY 410 (448)
T ss_dssp CEECCCSBSSEEEEECST-TC-CHHHHHHHHHHT-TEECEEGGGGS
T ss_pred eEEeCCCccEEEEEEcCC-CC-CHHHHHHHHHHC-CcEEEcchhhc
Confidence 898888999999999853 22 577899999877 99999998773
No 14
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=1.5e-46 Score=377.78 Aligned_cols=326 Identities=40% Similarity=0.710 Sum_probs=286.6
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHc---CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRD---GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
.+.|||+.|.+++++++.+.+++.+++.+ ....|++..|..+||+++++++.+.+|.+++++++|++++|+++++.+
T Consensus 37 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~ 116 (429)
T 1yiz_A 37 YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYA 116 (429)
T ss_dssp HCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHH
Confidence 37899999999888889999999998876 346798888999999999999998888777665269999999999999
Q ss_pred HHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC---------CCCCCHHHHHhhcccCCcEEEecCCCCCcc
Q 013883 186 TILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP---------DFAIPIEELKSTISKNTRAILMNTPHNPTG 256 (434)
Q Consensus 186 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~---------~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG 256 (434)
++++++++||+|+++.|+|+++...++..|++++.+|++++ ++.+|++.+++++++++++|++++|+||||
T Consensus 117 ~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG 196 (429)
T 1yiz_A 117 TIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLG 196 (429)
T ss_dssp HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCCCCCC
Confidence 99999999999999999999999999999999999999864 467999999999988899999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG 335 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~ 335 (434)
.+++.+++++|+++|++||+++|+||+|.++.+++. ..++..+....++++++.|+||.+|++|+|+||+++++++++.
T Consensus 197 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 276 (429)
T 1yiz_A 197 KVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKN 276 (429)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHHH
Confidence 999999999999999999999999999999988764 3445555434578999999999999999999999999999999
Q ss_pred HHHHhhccccCCchHHHHHHHHHHhC-----C--hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCC
Q 013883 336 VRQAHSFLTFATSTPMQWAATAALRA-----P--ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFG 408 (434)
Q Consensus 336 l~~~~~~~~~~~~~~~q~a~~~~L~~-----~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 408 (434)
+.......+++.+.+.|.++..+|+. . ++++++++++++++++.+.+.|++.|+.+..+++++|+|+++....
T Consensus 277 l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~ 356 (429)
T 1yiz_A 277 LQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLD 356 (429)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCSSC
T ss_pred HHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEEccccc
Confidence 98877777889999999999999987 5 6688999999999999999999988999888889999999885421
Q ss_pred ----------CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 409 ----------HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 409 ----------~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
..+..+++++|++++||.+.||+.|+
T Consensus 357 ~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~ 392 (429)
T 1yiz_A 357 SKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFY 392 (429)
T ss_dssp TTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGS
T ss_pred ccccccccccCCCHHHHHHHHHHhCCEEEeCchHhC
Confidence 02456788888877799999997763
No 15
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-46 Score=375.96 Aligned_cols=321 Identities=23% Similarity=0.385 Sum_probs=284.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCC-CCcEEEcCChHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDP-EKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~~i~~t~G~~~ai~~~~ 187 (434)
+.|||+.|.+++++++.+.+++.+++.+. ...|++..|..+||+++++++.+.+|.++++ + +|++|+|+++++.+++
T Consensus 48 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~-~v~~t~G~~~al~~~~ 126 (404)
T 2o1b_A 48 PLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKED-EVCILYGTKNGLVAVP 126 (404)
T ss_dssp CCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTT-SEEEESSHHHHHHHHH
T ss_pred CEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcc-cEEEcCCcHHHHHHHH
Confidence 58999999998888899999998887542 3578887899999999999999888987776 6 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
++++++||+|++++|+|+++...++..|++++.++.+++++.+|++.+++++++++++|++++|+||||.+++.+++++|
T Consensus 127 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l 206 (404)
T 2o1b_A 127 TCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEA 206 (404)
T ss_dssp HHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHH
Confidence 99999999999999999999999999999999999886566789999999988788999999999999999999999999
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~ 347 (434)
+++|++||++||+||+|.++.+++...++..+.+..++++++.||||.+|++|+|+||+++++++++.++.......++.
T Consensus 207 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~ 286 (404)
T 2o1b_A 207 IAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGM 286 (404)
T ss_dssp HHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHhhccCCC
Confidence 99999999999999999999887644455555433468899999999999999999999999999999988777667889
Q ss_pred chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEE
Q 013883 348 STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v 427 (434)
+.+.|.++..+|+..++++++++++++++++.+.+.|++.|+.+.++++++|+|+++.. +. +..+++++|++++||.+
T Consensus 287 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~-~~-~~~~l~~~l~~~~gi~v 364 (404)
T 2o1b_A 287 FGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPP-GY-DSEQFEQFLVQEKSILV 364 (404)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCCBSSEEEEECCT-TC-CHHHHHHHHHHHHCEEC
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCcceEEEEeCCC-CC-CHHHHHHHHHHHCCEEE
Confidence 99999999999987677899999999999999999999999998889999999998742 22 46789999887779999
Q ss_pred ECCCCC
Q 013883 428 IPTSVF 433 (434)
Q Consensus 428 ~pG~~F 433 (434)
.||+.|
T Consensus 365 ~~g~~f 370 (404)
T 2o1b_A 365 APGKPF 370 (404)
T ss_dssp EESGGG
T ss_pred eCchhh
Confidence 999766
No 16
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=6.3e-46 Score=373.29 Aligned_cols=345 Identities=23% Similarity=0.406 Sum_probs=282.7
Q ss_pred hhhhccCCchHHHHHhhhccccHHHHHHHHhhcCCeeEeCCCCCC----CCCcHHHHHHHHHHHHcC-CCCCCCCCCcHH
Q 013883 76 TIQKTNLQPQQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPN----FDGPDFVKDAAIQAIRDG-KNQYARGHGVPE 150 (434)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~----~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~ 150 (434)
..+.+.+++..+.+.+...+.. +.++|||+.|.|+ +++++.+.+++.+++... ...|.+..|..+
T Consensus 31 ~~~~~~~~i~~~~~~~~~~~~~----------~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~ 100 (427)
T 3dyd_A 31 MAKKTFNPIRAIVDNMKVKPNP----------NKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLS 100 (427)
T ss_dssp ----------------CCCCCT----------TSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHH
T ss_pred HhhcccchHHHHHHHHhhcccC----------CCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHH
Confidence 3344444555555555443321 2356999999886 578899999999988764 468999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCC
Q 013883 151 FNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFA 229 (434)
Q Consensus 151 lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~ 229 (434)
+|+++++++.+. +.+++++ +|++|+|+++++.+++..++++||+|++++|+|.++...++..|++++.+++++ .++.
T Consensus 101 lr~~la~~~~~~-~~~~~~~-~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 178 (427)
T 3dyd_A 101 SREEIASYYHCP-EAPLEAK-DVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWE 178 (427)
T ss_dssp HHHHHHHHHCBT-TBCCCGG-GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTE
T ss_pred HHHHHHHHHhhc-CCCCChH-HEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCC
Confidence 999999999866 7778888 899999999999999999999999999999999999999999999999999875 4688
Q ss_pred CCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC-ccccCCCCCCCceEE
Q 013883 230 IPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDH-ISIASLPGMYERTVT 308 (434)
Q Consensus 230 ~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~-~~~~~~~~~~~~~i~ 308 (434)
+|++.+++++++++++|++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++.. ..+..+.. ..++++
T Consensus 179 ~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~-~~~vi~ 257 (427)
T 3dyd_A 179 IDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLST-DVPILS 257 (427)
T ss_dssp ECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCS-SCCEEE
T ss_pred CCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCC-CCcEEE
Confidence 9999999999989999999999999999999999999999999999999999999999987643 34444433 356899
Q ss_pred EccCChhhccccceeeeEEeC-------hhhHHHHHHHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHH
Q 013883 309 MNSLGKTFSLTGWKIGWAIAP-------PHLTWGVRQAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 309 i~S~SK~~g~~G~R~G~~~~~-------~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l 380 (434)
++||||.|+++|+|+||++++ +++++.+...... .++++.+.|.++..+|++ ..+++++++++++++++.+
T Consensus 258 ~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l 336 (427)
T 3dyd_A 258 CGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLC 336 (427)
T ss_dssp EEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred EeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 4677777666543 688999999999999984 4678899999999999999
Q ss_pred HHHhhhC-CCEeecCCeeEEEeeecCCC---CCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 381 VEGLNAV-GFKVFPSSGTYFVVVDHTPF---GHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 381 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
.+.|+++ |+.+..+++++|+|+++... ...++.+++++|++++||++.||+.|+
T Consensus 337 ~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~ 394 (427)
T 3dyd_A 337 YGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFE 394 (427)
T ss_dssp HHHHHHSTTEEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGT
T ss_pred HHHHhcCCCceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccC
Confidence 9999997 89988899999999887421 112577899999877899999998763
No 17
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=7.1e-46 Score=368.24 Aligned_cols=318 Identities=30% Similarity=0.574 Sum_probs=283.2
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+++.|+|+.|.++++.++.+.+++.+++......|++..|..+||+++++++.+.+|.+++++ +|++++|+++++..++
T Consensus 40 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~-~v~~~~g~t~al~~~~ 118 (389)
T 1o4s_A 40 GEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPD-QVVVTNGAKQALFNAF 118 (389)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGG-GEEEESHHHHHHHHHH
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHH-HEEEecCHHHHHHHHH
Confidence 457899999999888889999999988876556898888999999999999998888877888 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
.+++++||+|++++|+|+++...++..|++++.+|.++ +++.+|++.+++++++++++|++++|+||||.+++.+++++
T Consensus 119 ~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~ 198 (389)
T 1o4s_A 119 MALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEG 198 (389)
T ss_dssp HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999975 36789999999999888999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~ 346 (434)
|+++|++||+++|+||+|.++.+++...++..+....++++++.||||.+|++|+|+||+++++++++.++......+++
T Consensus 199 l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~~~~ 278 (389)
T 1o4s_A 199 LVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSC 278 (389)
T ss_dssp HHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhhcccC
Confidence 99999999999999999999988764445555543357899999999999999999999999999999888877766788
Q ss_pred CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 347 TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
.+.+.|.++..+|++. +++++++++++++.+.+.|+++|+++.++++++++|+++. .+..+++++|++++||.
T Consensus 279 ~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~gi~ 351 (389)
T 1o4s_A 279 INTVAQYAALKALEVD---NSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVR----GDDVKFCERLLEEKKVA 351 (389)
T ss_dssp CCHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEECS----SCHHHHHHHHHHHHCEE
T ss_pred CCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcCCeeecCCcceEEEEeCC----CCHHHHHHHHHHHCCEE
Confidence 8999999999999875 6778899999999999999998998888889999998874 25778999998667999
Q ss_pred EECCCCC
Q 013883 427 AIPTSVF 433 (434)
Q Consensus 427 v~pG~~F 433 (434)
+.||..|
T Consensus 352 v~~g~~f 358 (389)
T 1o4s_A 352 LVPGSAF 358 (389)
T ss_dssp CEEGGGG
T ss_pred EeCchhc
Confidence 9999766
No 18
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=2e-46 Score=375.96 Aligned_cols=316 Identities=19% Similarity=0.246 Sum_probs=264.4
Q ss_pred CCeeEeCCC---CCCCCCc--HHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCC-cEEEcCChHH
Q 013883 109 HGAINLGQG---FPNFDGP--DFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEK-EVTVTSGCTE 181 (434)
Q Consensus 109 ~~~i~l~~g---~p~~~~~--~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~-~i~~t~G~~~ 181 (434)
+++|||+.| .|+.+++ +.+.+++.+++.+ ....|.+..|.++||+++++++.+..+..+++++ +|++|+|+++
T Consensus 49 ~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~ 128 (420)
T 4f4e_A 49 PTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTG 128 (420)
T ss_dssp SSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred CCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHH
Confidence 378999999 5665554 8999999998887 4568999999999999999999866554445543 6999999999
Q ss_pred HHHHH--HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEc-CCCCCCCCHHHHHhhcc---cCCcEEEecCCCCCc
Q 013883 182 AIAAT--ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITL-RPPDFAIPIEELKSTIS---KNTRAILMNTPHNPT 255 (434)
Q Consensus 182 ai~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i~---~~~~~i~~~~p~NPT 255 (434)
++.++ +.+++++||+|++++|+|.++...++..|++++.+|+ +++++++|++.++++++ ++++++++++|||||
T Consensus 129 al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPt 208 (420)
T 4f4e_A 129 ALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPT 208 (420)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTT
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 99999 4566899999999999999999999999999999998 34578999999999998 578899999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC--CccccCCCCCCCceEEEccCChhhccccceeeeEEe---Ch
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD--HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA---PP 330 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~--~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~---~~ 330 (434)
|.+++.+++++|+++|++||+++|+||+|.+|.++++ ..++..+.+..+++++++||||.+|++|+|+||+++ ++
T Consensus 209 G~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~ 288 (420)
T 4f4e_A 209 GVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSK 288 (420)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSH
T ss_pred CCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCH
Confidence 9999999999999999999999999999999998752 344444444568899999999999999999999874 45
Q ss_pred hhHH----HHHHHhhccccCCchHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHhhhC----CCEeecCCe
Q 013883 331 HLTW----GVRQAHSFLTFATSTPMQWAATAALRAP------ETYYEELKRDYSAKKAILVEGLNAV----GFKVFPSSG 396 (434)
Q Consensus 331 ~~~~----~l~~~~~~~~~~~~~~~q~a~~~~L~~~------~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~ 396 (434)
++++ .++...+....+++.+.|.+++.+|.+. ++++++++++++++++.+.+.|+++ |+.+..+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 368 (420)
T 4f4e_A 289 DEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQR 368 (420)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSC
T ss_pred HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCc
Confidence 5443 3444444556778899999999999874 4668889999999999999999986 788888899
Q ss_pred eEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 397 TYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
++|+|+++ +. +++.++++++||++.||.
T Consensus 369 g~~~~~~~------~~-~~~~~~l~~~gI~v~~~~ 396 (420)
T 4f4e_A 369 GMFSYSGL------TS-AQVDRLREEFGIYAVSTG 396 (420)
T ss_dssp SSEEECCC------CH-HHHHHHHHHHCEECCTTS
T ss_pred cEEEEeCC------CH-HHHHHHHHhCCEEecCCC
Confidence 99999876 23 455666777899999974
No 19
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=8.9e-46 Score=365.55 Aligned_cols=321 Identities=23% Similarity=0.367 Sum_probs=282.6
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
+.+.|||+.|.+++++++.+.+++.+++.+. ...|++..|..+||+++++++.+.+|.+++++++|++++|+++++.++
T Consensus 24 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~ 103 (376)
T 2dou_A 24 GVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHL 103 (376)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHH
T ss_pred CCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHH
Confidence 4578999999998888899999998887653 467887668899999999999988888776654799999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
+++++++||+|++++|+|+++...+...|++++.+|+ ++++.+|++.+++++++++++|++++||||||.+++.+++++
T Consensus 104 ~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~ 182 (376)
T 2dou_A 104 LLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL-REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEE 182 (376)
T ss_dssp HHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB-CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHH
T ss_pred HHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC-CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHHHHH
Confidence 9999999999999999999999999999999999998 446778999999988878899999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~ 346 (434)
|+++|++||+++|+||+|.++.+++...++..+.+..++++++.||||.+|++|+|+||+++++++++.++......+++
T Consensus 183 l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 262 (376)
T 2dou_A 183 ALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDFN 262 (376)
T ss_dssp HHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHhcccC
Confidence 99999999999999999999988765444444434457889999999999999999999999999999998877766778
Q ss_pred CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 347 TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
.+.+.|.++..+|++.++++++++++++++++.+.+.|++. +.+.++++++|+|+++.. +. +..+++++|+++ ||.
T Consensus 263 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~~~-gi~ 338 (376)
T 2dou_A 263 QYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV-LSLLPPRATMYLWGRLPE-GV-DDLEFGLRLVER-GVA 338 (376)
T ss_dssp SCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT-SEECCCCBSSEEEEECCT-TC-CHHHHHHHHHHT-TEE
T ss_pred CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh-cCccCCCeeEEEEEECCC-CC-CHHHHHHHHHHC-CEE
Confidence 89999999999998877789999999999999999999998 888888899999998753 22 467899999877 999
Q ss_pred EECCCCC
Q 013883 427 AIPTSVF 433 (434)
Q Consensus 427 v~pG~~F 433 (434)
+.||+.|
T Consensus 339 v~~g~~f 345 (376)
T 2dou_A 339 LAPGRGF 345 (376)
T ss_dssp CEEGGGG
T ss_pred EcCchhh
Confidence 9999766
No 20
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=2.3e-47 Score=380.55 Aligned_cols=338 Identities=17% Similarity=0.103 Sum_probs=263.9
Q ss_pred CCCcchhhhccCCchHHHHHhhhccccHHHHHHHHhhcCCeeEeCCC-CCCCC----CcHHHHHHHHHHHHcCC-CCCCC
Q 013883 71 TNQSDTIQKTNLQPQQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQG-FPNFD----GPDFVKDAAIQAIRDGK-NQYAR 144 (434)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g-~p~~~----~~~~v~~~~~~~~~~~~-~~Y~~ 144 (434)
+-|.+++..+.++++++++++++++. ++|||++| |.+.. ..+.|+++.+.+++++. +.|.|
T Consensus 19 ~~~~~v~~~p~d~i~~l~~~~~~d~~-------------~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p 85 (420)
T 4h51_A 19 ERWQKIQAQAPDVIFDLAKRAAAAKG-------------PKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLP 85 (420)
T ss_dssp HHHHTCCCCCCCHHHHHHHHHHHCCS-------------SCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHhCCCCCCCChHHHHHHHHhcCCC-------------CCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCC
Confidence 34555666666899999988877543 58999999 54433 23667777766666544 57999
Q ss_pred CCCcHHHHHHHHHHHHhhcCCCCCCCC-cEEEcCChHHHHHHHHHH----ccCCCCeEEEcCCCchhHHHHHHHcCCE-E
Q 013883 145 GHGVPEFNSAIASRFKKDSGLEVDPEK-EVTVTSGCTEAIAATILG----LINPGDEVILFAPFYDSYEATLSMAGAK-I 218 (434)
Q Consensus 145 ~~G~~~lr~~ia~~l~~~~g~~~~~~~-~i~~t~G~~~ai~~~~~~----l~~~gd~Vlv~~p~y~~~~~~~~~~G~~-~ 218 (434)
..|+++||+++++++.+.. ...++ ..+-|.|++.++..++.. +.+|||+|++++|+|++|..+++.+|++ +
T Consensus 86 ~~G~p~lr~aia~~~~g~~---~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V 162 (420)
T 4h51_A 86 ISGYQPFIDEAVKIIYGNT---VELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNI 162 (420)
T ss_dssp TTCCHHHHHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCE
T ss_pred cCChHHHHHHHHHHhcCCC---ccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEE
Confidence 9999999999999986432 22331 234477888777655443 4579999999999999999999999997 5
Q ss_pred EEEEcCC-CCCCCCHHHHHhhcc---cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC-
Q 013883 219 KCITLRP-PDFAIPIEELKSTIS---KNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDH- 293 (434)
Q Consensus 219 ~~v~~~~-~~~~~d~~~l~~~i~---~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~- 293 (434)
..+++.+ +++.+|++.+.+.+. ++++++++++||||||.+++.++|++|+++|+++++++|+||+|++|.+++..
T Consensus 163 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~ 242 (420)
T 4h51_A 163 CTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDT 242 (420)
T ss_dssp EEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHH
T ss_pred EeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCccc
Confidence 5555543 568889999888774 47788889999999999999999999999999999999999999999987532
Q ss_pred --ccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhH-------HHHHHHhhccccCCchHHHHHHHHHHhCC--
Q 013883 294 --ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLT-------WGVRQAHSFLTFATSTPMQWAATAALRAP-- 362 (434)
Q Consensus 294 --~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~-------~~l~~~~~~~~~~~~~~~q~a~~~~L~~~-- 362 (434)
..+..+....+++++++||||+|+++|||+||++++.+.. .++....+....+++..+|.++..+|.++
T Consensus 243 ~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l 322 (420)
T 4h51_A 243 DAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNEL 322 (420)
T ss_dssp HTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHH
T ss_pred chHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHH
Confidence 2233333456789999999999999999999999865443 34455666678899999999999999985
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHHhhhCC----CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 363 ----ETYYEELKRDYSAKKAILVEGLNAVG----FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 363 ----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
++.++.++++|+++|+.+.+.|+++| |.++++++|||.|+++. .++++.| +++||+++||..
T Consensus 323 ~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls-------~e~v~~L-~e~~Vy~~~~gR 392 (420)
T 4h51_A 323 RKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS-------KAQCEYC-QNHNIFITVSGR 392 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC-------HHHHHHH-HHTTEECCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC-------HHHHHHH-HhCCEEEcCCCE
Confidence 34567889999999999999999875 66778899999998762 3566655 677999999864
No 21
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.7e-45 Score=367.41 Aligned_cols=321 Identities=29% Similarity=0.530 Sum_probs=283.2
Q ss_pred cCCeeEeCCCCC---CCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGFP---NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~p---~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+++.|+|+.|.| +++.++.+.+++.+++......|++..|..++|+++++++.+.+|..++++ +|++|+|+++++.
T Consensus 37 g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~-~v~~t~g~~~al~ 115 (406)
T 1xi9_A 37 GIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPD-DVRVTAAVTEALQ 115 (406)
T ss_dssp TCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEESHHHHHHH
T ss_pred CCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHH-HEEEcCChHHHHH
Confidence 347899999998 778888999999988876656799888999999999999999889888888 8999999999999
Q ss_pred HHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHH
Q 013883 185 ATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREE 263 (434)
Q Consensus 185 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~ 263 (434)
+++.+++++||+|++++|+|+++...++..|++++.++.++ +++.+|++.+++++++++++|++++|+||||.+++.++
T Consensus 116 ~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~ 195 (406)
T 1xi9_A 116 LIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKT 195 (406)
T ss_dssp HHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHH
Confidence 99999999999999999999999999999999999999875 45778999999999888999999999999999999999
Q ss_pred HHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCc-eEEEccCChhhccccceeeeEE--eCh----hhHHHH
Q 013883 264 LNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYER-TVTMNSLGKTFSLTGWKIGWAI--APP----HLTWGV 336 (434)
Q Consensus 264 l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~-~i~i~S~SK~~g~~G~R~G~~~--~~~----~~~~~l 336 (434)
+++|+++|++||+++|+||+|.++.+++...++..+. .++ ++++.||||.+|++|+|+||++ +++ ++++.+
T Consensus 196 l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l 273 (406)
T 1xi9_A 196 LEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT--KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAI 273 (406)
T ss_dssp HHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC--SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcC--CCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHH
Confidence 9999999999999999999999998854444555553 567 8999999999999999999999 898 999988
Q ss_pred HHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCC-CCCCHHH
Q 013883 337 RQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPF-GHETDIA 414 (434)
Q Consensus 337 ~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~ 414 (434)
....... ++.+.+.|.++..+|+...+++++++++++++++.+.+.|+++ |+.+.++++++++|+++... + .+..+
T Consensus 274 ~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 351 (406)
T 1xi9_A 274 DRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPW-KNDKE 351 (406)
T ss_dssp HHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSC-SSHHH
T ss_pred HHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCccCC-CCHHH
Confidence 8777655 7888999999999997656678899999999999999999988 88888888999999877431 2 25778
Q ss_pred HHHHHHHhcCeEEECCCCC
Q 013883 415 FCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 415 ~~~~Ll~~~GV~v~pG~~F 433 (434)
++++|++++||.+.||..|
T Consensus 352 l~~~l~~~~gi~v~~g~~f 370 (406)
T 1xi9_A 352 FVLDVLHNAHVLFVHGSGF 370 (406)
T ss_dssp HHHHHHHHHCEECEEGGGG
T ss_pred HHHHHHHhCCEEEeCchhc
Confidence 9998886679999999766
No 22
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=5.6e-45 Score=359.03 Aligned_cols=310 Identities=26% Similarity=0.493 Sum_probs=277.4
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+++.|+|+.|.+++++++.+.+++.+++.+....|++..|..+||+++++++++.+|..++++ +|++++|+++++.+++
T Consensus 28 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~-~v~~~~g~~~a~~~~~ 106 (370)
T 2z61_A 28 GKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPD-NIIITGGSSLGLFFAL 106 (370)
T ss_dssp TCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGG-GEEEESSHHHHHHHHH
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChh-hEEECCChHHHHHHHH
Confidence 457899999999887889999999998887667899888999999999999998899888888 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
.+++++||+|++++|+|+++...++..|++++.++ +|++.+++++++++++|++++||||||.+++.+ |
T Consensus 107 ~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~-------~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~----l 175 (370)
T 2z61_A 107 SSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD-------FTVESLEEALSDKTKAIIINSPSNPLGEVIDRE----I 175 (370)
T ss_dssp HHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC-------SSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHH----H
T ss_pred HHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC-------CCHHHHHHhcccCceEEEEcCCCCCcCcccCHH----H
Confidence 99999999999999999999999999999999887 589999999988899999999999999999987 8
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~ 347 (434)
+++|++||+++|+||+|.++.+++...++..+.+..++++++.||||.+|++|+|+||+++++++++.++.......++.
T Consensus 176 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 255 (370)
T 2z61_A 176 YEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNLFISA 255 (370)
T ss_dssp HHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhhcccCC
Confidence 99999999999999999999887655555555444678999999999999999999999999999999988777667789
Q ss_pred chHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 348 STPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 348 ~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
+.+.|.++..+|+. .++++++++++++++++.+.+.|++.|+++.++++++|+|+++.. +..+++++|++++||.
T Consensus 256 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~ 331 (370)
T 2z61_A 256 PTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGE----DGREFAYKLLKEKFVA 331 (370)
T ss_dssp CHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCBTTEECCBCSS----CHHHHHHHHHHHHCEE
T ss_pred CHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCcceEEEEecCC----CHHHHHHHHHHhCCEE
Confidence 99999999988875 467888999999999999999999989988888899999988743 4778999998667999
Q ss_pred EECCCCC
Q 013883 427 AIPTSVF 433 (434)
Q Consensus 427 v~pG~~F 433 (434)
+.||+.|
T Consensus 332 v~~g~~f 338 (370)
T 2z61_A 332 LTPGIGF 338 (370)
T ss_dssp CEEGGGG
T ss_pred EeCchhh
Confidence 9999766
No 23
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.2e-45 Score=364.34 Aligned_cols=318 Identities=21% Similarity=0.231 Sum_probs=284.6
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+.+.|||+.|.+++++++.+.+++.+++.+....|++ .| .++|+++++++++.+|.+++++ +|++|+|+++++..++
T Consensus 22 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~-~i~~t~g~~~a~~~~~ 98 (377)
T 3fdb_A 22 GQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARPE-WIFPIPDVVRGLYIAI 98 (377)
T ss_dssp CTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGG-GEEEESCHHHHHHHHH
T ss_pred CCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHH-HEEEeCChHHHHHHHH
Confidence 4579999999999999999999999999887788998 78 8999999999999999988888 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
.+++++||+|+++.|+|.++...++..|++++.+|++++ +|++.++++++++++++++++||||||.+++.+++++|
T Consensus 99 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l 175 (377)
T 3fdb_A 99 DHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG---INLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNEL 175 (377)
T ss_dssp HHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS---CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHH
T ss_pred HHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC---CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999863 99999999999899999999999999999999999999
Q ss_pred HHHHHHcCcEEEEcCcCCccccCC--CCccccCCCCCCCceEEEccCChhhccccceeeeEEe-ChhhHHHHHHHhhccc
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEM--DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSFLT 344 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~--~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~-~~~~~~~l~~~~~~~~ 344 (434)
+++|++||+++|+||+|.++.+++ ...++..+.. .++++++.||||.+|++|+|+||+++ ++++++.++......+
T Consensus 176 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 254 (377)
T 3fdb_A 176 CDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTA-ASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIK 254 (377)
T ss_dssp HHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHH-HHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHHH
T ss_pred HHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccC-CCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHhhc
Confidence 999999999999999999998876 3334444322 56889999999999999999999887 6888888887776667
Q ss_pred cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHh
Q 013883 345 FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV--GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKE 422 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 422 (434)
++.+.+.+.++..+|++.++++++++++++++++.+.+.|++. |+.+.++++++++|+++...+. +.+++.+|+++
T Consensus 255 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~ 332 (377)
T 3fdb_A 255 DGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTI--EGSPSEFFIEK 332 (377)
T ss_dssp CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCC--CSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCC--CHHHHHHHHHh
Confidence 8899999999999999877889999999999999999999985 8999999999999998865333 24688888888
Q ss_pred cCeEEECCCCCC
Q 013883 423 VGVVAIPTSVFY 434 (434)
Q Consensus 423 ~GV~v~pG~~F~ 434 (434)
+||.+.||+.|+
T Consensus 333 ~gi~v~~g~~~~ 344 (377)
T 3fdb_A 333 AKVAMNDGAWFG 344 (377)
T ss_dssp HCEECEEGGGGC
T ss_pred CCEEecCChhcc
Confidence 899999998764
No 24
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=2.6e-45 Score=370.96 Aligned_cols=315 Identities=23% Similarity=0.350 Sum_probs=275.2
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHH-----cCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIR-----DGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~-----~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.++|||+.|+++++.++.+.+++.+++. .....|.+..|..+||+++++++. +|..++++ +|++++|++++
T Consensus 68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~-~i~~t~G~~~a 144 (449)
T 3qgu_A 68 DAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAAD-EIFISDGSKCD 144 (449)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGG-GEEEESCHHHH
T ss_pred CCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHH-HEEEccCHHHH
Confidence 45789999999999999999999999887 445689998999999999999997 77778888 89999999999
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCE----------EEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCC
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAK----------IKCITLRPP-DFAIPIEELKSTISKNTRAILMNTP 251 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~----------~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p 251 (434)
+..+ ..++++||+|++++|+|.++...+...|++ ++.++++++ ++..|++.+ +++++|++++|
T Consensus 145 l~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~l~~p 218 (449)
T 3qgu_A 145 IARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIFFCSP 218 (449)
T ss_dssp HHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCCSEEEEESS
T ss_pred HHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----CCCCEEEEeCC
Confidence 9988 888999999999999999999999999999 999998763 455565432 57899999999
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeCh
Q 013883 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP 330 (434)
Q Consensus 252 ~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~ 330 (434)
|||||.+++.+++++|+++|++||+++|+||+|.+|.+++. ...+..+....++++++.||||.+|++|+|+||+++++
T Consensus 219 ~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 298 (449)
T 3qgu_A 219 NNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPK 298 (449)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCT
T ss_pred CCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCH
Confidence 99999999999999999999999999999999999988763 34556665556789999999999999999999999998
Q ss_pred hhHH--------HHHHHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEe
Q 013883 331 HLTW--------GVRQAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVV 401 (434)
Q Consensus 331 ~~~~--------~l~~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 401 (434)
++++ .+........++.+.+.|.++..+|++ ..+++++++++++++++.+.+.|+++|+.+.++++++|+|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 378 (449)
T 3qgu_A 299 ALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIW 378 (449)
T ss_dssp TCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEESSSSSEEE
T ss_pred HHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCeeEEE
Confidence 8765 455555556668899999999999986 3567889999999999999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 402 VDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 402 ~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+++. +. ++.+++++|++++||.+.||+.|+
T Consensus 379 ~~~~--~~-~~~~~~~~l~~~~gI~v~pg~~f~ 408 (449)
T 3qgu_A 379 VGFP--GK-PSWDVFAEILERCNIVTTPGSGYG 408 (449)
T ss_dssp EECT--TS-CHHHHHHHHHHHHCEECEEGGGGC
T ss_pred EECC--CC-CHHHHHHHHHHHCCEEEecchHhC
Confidence 9985 33 578899999988899999998763
No 25
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=6.6e-45 Score=361.88 Aligned_cols=314 Identities=23% Similarity=0.447 Sum_probs=272.1
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcC----CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDG----KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~----~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
.+.|||+.|+|++++++.+.+++.+++.+. ...|++..|..+||+++++++.+.+|..++++ +|++|+|+++++.
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~-~i~~~~g~~~al~ 113 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNAD-NLYMTMGAAASLS 113 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEESSHHHHHH
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChH-HEEEccCHHHHHH
Confidence 478999999999999999999999988764 46899989999999999999999999888888 8999999999999
Q ss_pred HHHHHccCCC-CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHH
Q 013883 185 ATILGLINPG-DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREE 263 (434)
Q Consensus 185 ~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~ 263 (434)
.++.+++++| |+|++++|+|.++...++..|++++.+|++++++++|++.+++++++++++|++++||||||.+++.++
T Consensus 114 ~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~ 193 (398)
T 3ele_A 114 ICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEET 193 (398)
T ss_dssp HHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHH
T ss_pred HHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHH
Confidence 9999999999 999999999999999999999999999998767899999999999989999999999999999999999
Q ss_pred HHHHHHHHHH------cCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhH----
Q 013883 264 LNVIASLCIE------NDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLT---- 333 (434)
Q Consensus 264 l~~i~~la~~------~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~---- 333 (434)
+++|+++|++ ||+++|+||+|.++.+++..... .....++++++.||||.+|++|+|+||++++++++
T Consensus 194 l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 271 (398)
T 3ele_A 194 IKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPF--VTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAE 271 (398)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCC--GGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHH
T ss_pred HHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCC--hHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHH
Confidence 9999999999 99999999999999887643222 22235789999999999999999999999998743
Q ss_pred --HHHHHHhhc-cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCC
Q 013883 334 --WGVRQAHSF-LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHE 410 (434)
Q Consensus 334 --~~l~~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 410 (434)
..+...... ..++.+.+.|.++..+|++.. .+++++++++.+.+.|+++|+.+.++++++|+|++++. .
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---~ 343 (398)
T 3ele_A 272 LYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-----DINAYKENRDLLYEGLTRIGYHCFKPDGAFYMFVKALE---D 343 (398)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-----CHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECSS---S
T ss_pred HHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHcCCeecCCCeeEEEEEEcCC---C
Confidence 333333332 356778888988888887643 36778889999999999889999999999999998743 2
Q ss_pred CHHHHHHHHHHhcCeEEECCCCCC
Q 013883 411 TDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 411 ~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+..++++.| .++||.+.||+.|+
T Consensus 344 ~~~~~~~~l-~~~gi~v~~g~~~~ 366 (398)
T 3ele_A 344 DSNAFCEKA-KEEDVLIVAADGFG 366 (398)
T ss_dssp CHHHHHHHH-HTTTEECEESGGGT
T ss_pred CHHHHHHHH-HHCCEEEeCccccC
Confidence 577888876 45699999998763
No 26
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=3.1e-45 Score=365.04 Aligned_cols=324 Identities=18% Similarity=0.276 Sum_probs=286.5
Q ss_pred CeeEeCCCCCC-CCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 110 GAINLGQGFPN-FDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 110 ~~i~l~~g~p~-~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
..|||+.|.+. +++++.+++++.+++.+. ...|.+..|..++++++++++.+.+|.+++++++|++++|+++++..++
T Consensus 40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~ 119 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAV 119 (407)
T ss_dssp CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH
Confidence 36999998766 678899999999988754 3468888899999999999999999988877338999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC-----CCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR-----PPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTRE 262 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-----~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e 262 (434)
.+++++||+|+++.|+|.++...++..|++++.++++ ++++.+|++.+++++++++++|++++||||||.+++.+
T Consensus 120 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 199 (407)
T 3nra_A 120 AATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAE 199 (407)
T ss_dssp HTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHH
T ss_pred HHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHH
Confidence 9999999999999999999999999999999999984 24788999999999988999999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcCcCCccccCCCC-ccccCCC-CCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHh
Q 013883 263 ELNVIASLCIENDVLVFSDEVYDKLAFEMDH-ISIASLP-GMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAH 340 (434)
Q Consensus 263 ~l~~i~~la~~~~~~iI~Deay~~~~~~~~~-~~~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~ 340 (434)
++++|+++|++||+++|+||+|.++.+++.. ..+..+. ...++++++.||||.+|++|+|+||+++++++++.++...
T Consensus 200 ~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~ 279 (407)
T 3nra_A 200 EIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKLQ 279 (407)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHHH
Confidence 9999999999999999999999999887643 3444444 4567899999999999999999999999999999998888
Q ss_pred hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHH
Q 013883 341 SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYL 419 (434)
Q Consensus 341 ~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 419 (434)
....++.+.+.+.++..+|++.++++++.+++++++++.+.+.|+++ |+.+..+++++|+|+++...+. +..+++++|
T Consensus 280 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l 358 (407)
T 3nra_A 280 AIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAV-APAEFVKIL 358 (407)
T ss_dssp HHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSS-CHHHHHHHH
T ss_pred hhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCC-CHHHHHHHH
Confidence 87788888999999999998766788889999999999999999987 8998888999999998754333 577899999
Q ss_pred HHhcCeEEECCCCCC
Q 013883 420 IKEVGVVAIPTSVFY 434 (434)
Q Consensus 420 l~~~GV~v~pG~~F~ 434 (434)
++++||.+.||+.|+
T Consensus 359 ~~~~gi~v~~g~~~~ 373 (407)
T 3nra_A 359 RLQAGVVVTPGTEFS 373 (407)
T ss_dssp HHHHCEECEEGGGTC
T ss_pred HHhCCEEEeCchhhC
Confidence 887899999998763
No 27
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.1e-45 Score=368.07 Aligned_cols=340 Identities=16% Similarity=0.126 Sum_probs=274.5
Q ss_pred CcchhhhccCCchHHHHHhhhccccHHHHHHHHhhcCCeeEeCCCCC-CCCCcH----HHHHHHHHHHHc-CCCCCCCCC
Q 013883 73 QSDTIQKTNLQPQQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFP-NFDGPD----FVKDAAIQAIRD-GKNQYARGH 146 (434)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~----~v~~~~~~~~~~-~~~~Y~~~~ 146 (434)
|.+.+..+.+..+...+.+.+... +++|||+.|.| +...++ .+.+++.+...+ ....|.+..
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~------------~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~ 71 (401)
T 7aat_A 4 WSHVEMGPPDPILGVTEAFKRDTN------------SKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIA 71 (401)
T ss_dssp STTCCCCCCCHHHHHHHHHHHCCC------------TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTT
T ss_pred hhcCCCCCCChhHHHHHHHhhCCC------------CCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCC
Confidence 333344444455666666655432 36899999987 665433 467766666553 567899999
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEE--cCChHHHHHHHHHHcc---CCCCeEEEcCCCchhHHHHHHHcCCEEEEE
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTV--TSGCTEAIAATILGLI---NPGDEVILFAPFYDSYEATLSMAGAKIKCI 221 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~--t~G~~~ai~~~~~~l~---~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v 221 (434)
|.++||+++++++.+.+|..++++ +|++ |+|+++++.+++..+. ++||+|++++|+|.+|...++..|++++.+
T Consensus 72 g~~~lr~~ia~~~~~~~~~~~~~~-~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~ 150 (401)
T 7aat_A 72 GLADFTRASAELALGENSEAFKSG-RYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAY 150 (401)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTT-CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHhcCCCccccccC-ceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEee
Confidence 999999999999998888877788 7877 9999999998876654 899999999999999999999999999999
Q ss_pred EcCC-CCCCCCHHHHHhhcc---cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC---Cc
Q 013883 222 TLRP-PDFAIPIEELKSTIS---KNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD---HI 294 (434)
Q Consensus 222 ~~~~-~~~~~d~~~l~~~i~---~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~---~~ 294 (434)
|+++ +++++|++.+++.+. ++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..
T Consensus 151 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~ 230 (401)
T 7aat_A 151 RYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAW 230 (401)
T ss_dssp ECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTH
T ss_pred eeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHH
Confidence 9864 468899997777664 4788999999999999999999999999999999999999999999988652 22
Q ss_pred cccCCCCCCCceEEEccCChhhccccceeeeEEe---Chh----hHHHHHHHhhccccCCchHHHHHHHHHHhCC-----
Q 013883 295 SIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA---PPH----LTWGVRQAHSFLTFATSTPMQWAATAALRAP----- 362 (434)
Q Consensus 295 ~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~---~~~----~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~----- 362 (434)
++..+....+++++++||||.||++|+|+||+++ +++ +...++...+....+++...|.++..+|++.
T Consensus 231 ~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 310 (401)
T 7aat_A 231 ALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKE 310 (401)
T ss_dssp HHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHH
Confidence 3333333467899999999999999999999886 555 5566666666667788888899998888874
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHhhhCC----CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 363 -ETYYEELKRDYSAKKAILVEGLNAVG----FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 363 -~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
.+++++++++++++++.+.+.|+++| +.+.++++++|+|+++. .+++.+|++++||++.||..
T Consensus 311 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ll~~~gi~v~~~~R 378 (401)
T 7aat_A 311 WLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK-------PEQVERLTKEFSIYMTKDGR 378 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC-------HHHHHHHHHHHCEECCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCC-------HHHHHHHHHhCCEeccCCCe
Confidence 45678889999999999999999875 77778999999998762 35667888888999998753
No 28
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=3.5e-45 Score=374.93 Aligned_cols=334 Identities=19% Similarity=0.310 Sum_probs=274.0
Q ss_pred cHHHHHHHHhhcCCeeEeCCCCCCCCCcHHHHHHHHHHHHc----CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCc
Q 013883 97 TIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRD----GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKE 172 (434)
Q Consensus 97 ~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~ 172 (434)
..++++..+...+++|+|+.| +.. .|..+.+++.+++.. ....|.+..|..+||+++++++.+.+|..++++ +
T Consensus 83 ~~~~~~~~~~~~p~~i~~~~~-~~~-~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~ 159 (500)
T 3tcm_A 83 TFFREVLALCDHPDLLQREEI-KTL-FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANAD-D 159 (500)
T ss_dssp HHHHHHHHHHHSGGGGGCTTH-HHH-SCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGG-G
T ss_pred cHHHHHHHhhcCcccccCCCC-ccc-CCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcc-c
Confidence 334445555555556666555 222 344455555666655 346899999999999999999999999989888 8
Q ss_pred EEEcCChHHHHHHHHHHcc-CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhccc------CCc
Q 013883 173 VTVTSGCTEAIAATILGLI-NPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISK------NTR 244 (434)
Q Consensus 173 i~~t~G~~~ai~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~------~~~ 244 (434)
|++|+|+++++..++.+++ ++||+|++++|+|+.+...+...|++++.++++++ ++++|++.|++++++ +++
T Consensus 160 i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k 239 (500)
T 3tcm_A 160 IFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVR 239 (500)
T ss_dssp EEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCce
Confidence 9999999999999999998 89999999999999999999999999999999864 579999999999986 689
Q ss_pred EEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC--CccccC----CC--CCCCceEEEccCChhh
Q 013883 245 AILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD--HISIAS----LP--GMYERTVTMNSLGKTF 316 (434)
Q Consensus 245 ~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~--~~~~~~----~~--~~~~~~i~i~S~SK~~ 316 (434)
+|++++||||||.+++.+++++|+++|++||+++|+||+|.++.|+++ ..++.. +. ....++++++||||.|
T Consensus 240 ~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~ 319 (500)
T 3tcm_A 240 ALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGY 319 (500)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTT
T ss_pred EEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccC
Confidence 999999999999999999999999999999999999999999998643 333321 11 1234689999999999
Q ss_pred -ccccceeeeEEe---ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC----------hHHHHHHHHHHHHHHHHHHH
Q 013883 317 -SLTGWKIGWAIA---PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP----------ETYYEELKRDYSAKKAILVE 382 (434)
Q Consensus 317 -g~~G~R~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~----------~~~~~~~~~~~~~~~~~l~~ 382 (434)
|++|+|+||+++ ++++++.+.+... ..++++.+.|.++..+|+.+ .+++++++++++++++.+.+
T Consensus 320 ~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 398 (500)
T 3tcm_A 320 YGECGKRGGYFEITGFSAPVREQIYKIAS-VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEH 398 (500)
T ss_dssp TCCGGGCCEEEEEESCCTTHHHHHHHHHH-TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccceEEEEEeCCCHHHHHHHHHHHh-cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999998 8999999887764 56788999999999999853 24566778899999999999
Q ss_pred HhhhC-CCEeecCCeeEEEeeecCC----------CCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 383 GLNAV-GFKVFPSSGTYFVVVDHTP----------FGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 383 ~L~~~-g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
.|+++ |+.+.+++++||+|+++.. .+..++..++.++++++||+++||+.|+
T Consensus 399 ~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 461 (500)
T 3tcm_A 399 AFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFG 461 (500)
T ss_dssp HHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTC
T ss_pred HHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccC
Confidence 99998 9999999999999976531 1222244556778888899999999885
No 29
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=3e-44 Score=354.80 Aligned_cols=322 Identities=18% Similarity=0.295 Sum_probs=283.9
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
++.|||+.|.+++++++.+.+++.+++.+....|++. ..++++++++++.+.+|..++++ +|++|+|+++++.+++.
T Consensus 24 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~-~v~~~~g~~~a~~~~~~ 100 (383)
T 3kax_A 24 EELIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQKE-WIVFSAGIVPALSTSIQ 100 (383)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCCGG-GEEEESCHHHHHHHHHH
T ss_pred CCeeecccccCCCCCCHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCChh-hEEEcCCHHHHHHHHHH
Confidence 4789999999999999999999999998767778775 57899999999999999888888 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC--CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP--DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~--~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
+++++||+|+++.|+|.++...+...|++++.++++++ ++.+|++.+++++++++++|++++||||||.+++.+++++
T Consensus 101 ~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~ 180 (383)
T 3kax_A 101 AFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELTK 180 (383)
T ss_dssp HHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHHH
T ss_pred HhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHH
Confidence 99999999999999999999999999999999998642 3568999999999889999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCC-CCceEEEccCChhhccccceeeeEEe-ChhhHHHHHHHhhcc
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGM-YERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSFL 343 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~~~~-~~~~~~~l~~~~~~~ 343 (434)
|+++|++||+++|+||+|.++.+++. ..++..+... .++++++.||||.+|++|+|+||+++ ++++++.++......
T Consensus 181 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 260 (383)
T 3kax_A 181 LGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQ 260 (383)
T ss_dssp HHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhc
Confidence 99999999999999999999988764 3344444321 37889999999999999999999998 588888888776544
Q ss_pred -ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHH
Q 013883 344 -TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV--GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLI 420 (434)
Q Consensus 344 -~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll 420 (434)
.++.+.+.+.++..+|+..++++++++++++++++.+.+.|++. |+.+.++++++++|+++...+. +..+++++|+
T Consensus 261 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ 339 (383)
T 3kax_A 261 GFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALNL-SQDERTKLLE 339 (383)
T ss_dssp TCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGCC-CHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEccccCC-CHHHHHHHHH
Confidence 34788999999999999878889999999999999999999884 8999999999999998865433 5788999998
Q ss_pred HhcCeEEECCCCCC
Q 013883 421 KEVGVVAIPTSVFY 434 (434)
Q Consensus 421 ~~~GV~v~pG~~F~ 434 (434)
+++||.+.||+.|.
T Consensus 340 ~~~gi~v~~g~~~~ 353 (383)
T 3kax_A 340 EKGKIIVEPGEKYG 353 (383)
T ss_dssp HTSCEECEESGGGC
T ss_pred hhCCEEeECchhhc
Confidence 77899999998763
No 30
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=8.3e-45 Score=365.62 Aligned_cols=321 Identities=21% Similarity=0.307 Sum_probs=285.1
Q ss_pred hcCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 107 IKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 107 ~~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
.+++.|||+.|.|++++++.+.+++.+++.+.. ..|.+..|..++|+++++++++.+|.+++++ +|++|+|+++++.+
T Consensus 42 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~-~i~~t~g~t~al~~ 120 (437)
T 3g0t_A 42 TGTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPAR-ACVPTVGSMQGCFV 120 (437)
T ss_dssp HTCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEESHHHHHHHH
T ss_pred cCCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcc-cEEEeCCHHHHHHH
Confidence 346899999999999999999999999988655 7899999999999999999999999998888 89999999999999
Q ss_pred HHHHcc--CCCC--eEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc-ccCCcEEEecCCCCCcccCCC
Q 013883 186 TILGLI--NPGD--EVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI-SKNTRAILMNTPHNPTGKMFT 260 (434)
Q Consensus 186 ~~~~l~--~~gd--~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i-~~~~~~i~~~~p~NPTG~~~~ 260 (434)
++.+++ ++|| +|++++|+|.++...++..|++++.++++++++.+|++.+++++ ++++++|++++||||||.+++
T Consensus 121 ~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~ 200 (437)
T 3g0t_A 121 SFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMT 200 (437)
T ss_dssp HHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCC
T ss_pred HHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCC
Confidence 999998 9999 99999999999999999999999999998667789999999999 678999999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccc-------cCCCCCCCceEEEccCChhhccccceeeeEEeChhhH
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISI-------ASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLT 333 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~-------~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~ 333 (434)
.+++++|+++|++||+++|+||+|.++.+++ ..++ ..+....++++++.|+||.+|++|+|+||++++++++
T Consensus 201 ~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 279 (437)
T 3g0t_A 201 DEELRIIGELATKHDVIVIEDLAYFGMDFRK-DYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLY 279 (437)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCCTTS-CCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHH
T ss_pred HHHHHHHHHHHHHCCcEEEEEcchhhcccCC-CcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHh
Confidence 9999999999999999999999999988873 3333 4443346789999999999999999999999999998
Q ss_pred H-H-----------------HHHHhhccccCCchHHHHHHHHHHhCChHH---HHHHHHHHHHHHHHHHHHhhhCCCEee
Q 013883 334 W-G-----------------VRQAHSFLTFATSTPMQWAATAALRAPETY---YEELKRDYSAKKAILVEGLNAVGFKVF 392 (434)
Q Consensus 334 ~-~-----------------l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~~g~~~~ 392 (434)
+ . +........++.+.+.|.++..+|+..+++ +++++++++++++.+.+.|+++|+.+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 359 (437)
T 3g0t_A 280 EREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNGFNIV 359 (437)
T ss_dssp HCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTTEEES
T ss_pred hhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEEe
Confidence 8 7 766666667889999999999999874434 888999999999999999999999887
Q ss_pred -------cCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 393 -------PSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 393 -------~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
++.+++|+|+++. +. +..+++++|+++ ||.+.||..|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~--~~-~~~~l~~~L~~~-gi~v~~~~~~ 403 (437)
T 3g0t_A 360 YDKDGNEPLADGFYFTVGYK--GM-DSSKLIEKFVRY-GMCAITLKTT 403 (437)
T ss_dssp SCEETTEECCSSSEEEEEET--TC-CHHHHHHHHHHT-TEECEESTTT
T ss_pred ccccCCCCCceeEEEEEecC--CC-CHHHHHHHHHHc-CeEEeecccc
Confidence 4488889999875 32 578899998765 9999999865
No 31
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=1.5e-45 Score=372.71 Aligned_cols=336 Identities=15% Similarity=0.175 Sum_probs=272.8
Q ss_pred hhhhccCCchHHHHHhhhccccHHHHHHHHhhcCCeeEeCCCCC-CCCCcHHHHHHHHHH---HH----cCCCCCCCCCC
Q 013883 76 TIQKTNLQPQQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFP-NFDGPDFVKDAAIQA---IR----DGKNQYARGHG 147 (434)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~v~~~~~~~---~~----~~~~~Y~~~~G 147 (434)
++..+.++++.+.+++++.+. +++|||+.|.+ ++..++.+.+++.++ +. .....|.+..|
T Consensus 28 ~~~~~~~~i~~~~~~~~~~~~------------~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G 95 (448)
T 3meb_A 28 FPASPPDAILNLTVLYNADTN------------PKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAG 95 (448)
T ss_dssp CCCCCCCTTHHHHHHHHHCCC------------TTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTC
T ss_pred CCCCCCChHHHHHHHHHhCCC------------CCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcc
Confidence 344444677888888876554 26899999977 776655555555554 33 34578999999
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEE--cCChHHHHHH--HHHHccCCCCeEEEcCCCchhHHHHHH----HcCCEEE
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTV--TSGCTEAIAA--TILGLINPGDEVILFAPFYDSYEATLS----MAGAKIK 219 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~--t~G~~~ai~~--~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~ 219 (434)
.++||+++++++.+.....++++ +|++ |+|+++++.+ .+.+++.+||+|++++|+|.+|...++ ..|++++
T Consensus 96 ~~~lr~~ia~~l~g~~~~~~~~~-~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~ 174 (448)
T 3meb_A 96 FPLFLEAAQFLMFGKDSKAAQEG-RIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYK 174 (448)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTT-CEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCE
T ss_pred hHHHHHHHHHHhcCCCccccCcC-cEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEE
Confidence 99999999999842111112256 8999 9999999987 556778999999999999999999999 9999999
Q ss_pred EEEc-CCC-CCCCCHHHHHhhccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC---
Q 013883 220 CITL-RPP-DFAIPIEELKSTISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM--- 291 (434)
Q Consensus 220 ~v~~-~~~-~~~~d~~~l~~~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~--- 291 (434)
.+|+ +++ ++.+|++.+++++++ +++++++++||||||.+++.++|++|+++|++||+++|+||+|++|.+++
T Consensus 175 ~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~ 254 (448)
T 3meb_A 175 EYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEA 254 (448)
T ss_dssp EECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHH
T ss_pred EEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCccc
Confidence 9999 444 589999999999974 57788899999999999999999999999999999999999999998775
Q ss_pred CCccccCCCCCCCceEEEccCChhhccccceeeeE--Ee--------C-h----hhHHHHHHHhhccccCCchHHHHHHH
Q 013883 292 DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWA--IA--------P-P----HLTWGVRQAHSFLTFATSTPMQWAAT 356 (434)
Q Consensus 292 ~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~--~~--------~-~----~~~~~l~~~~~~~~~~~~~~~q~a~~ 356 (434)
+...+..+....++++++.||||.||++|+|+||+ ++ + + +++++++...+....+++.+.|.++.
T Consensus 255 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~ 334 (448)
T 3meb_A 255 DAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQ 334 (448)
T ss_dssp HTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred CchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHH
Confidence 22334433334578999999999999999999998 66 4 4 67777777777777889999999999
Q ss_pred HHHhCCh------HHHHHHHHHHHHHHHHHHHHhhhC---C------CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHH
Q 013883 357 AALRAPE------TYYEELKRDYSAKKAILVEGLNAV---G------FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIK 421 (434)
Q Consensus 357 ~~L~~~~------~~~~~~~~~~~~~~~~l~~~L~~~---g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~ 421 (434)
.+|.+.+ +++++++++++++++.+.+.|+++ + |.+..+++++|+|+++ +.+++.+|++
T Consensus 335 ~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~ll~ 407 (448)
T 3meb_A 335 VIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGL-------TPEHVDYLKE 407 (448)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCC-------CHHHHHHHHH
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCC-------CHHHHHHHHH
Confidence 9998752 447888999999999999999987 4 6667889999999876 2478888888
Q ss_pred hcCeEEECCC
Q 013883 422 EVGVVAIPTS 431 (434)
Q Consensus 422 ~~GV~v~pG~ 431 (434)
++||++.||+
T Consensus 408 ~~gV~v~~G~ 417 (448)
T 3meb_A 408 KWSIYLVKAG 417 (448)
T ss_dssp HHCEEECSGG
T ss_pred hCCEEEeCCC
Confidence 8999999974
No 32
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=3.5e-44 Score=355.30 Aligned_cols=321 Identities=22% Similarity=0.316 Sum_probs=283.8
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.|||+.|.+++++++.+.+++.+++.+....|.+. ..++++++++++.+.+|.+++++ +|++++|+++++.+++.+
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~-~i~~~~g~~~a~~~~~~~ 104 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKED-WCVFASGVVPAISAMVRQ 104 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCGG-GEEEESCHHHHHHHHHHH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCHH-HEEECCCHHHHHHHHHHH
Confidence 789999999999999999999999988777778775 58999999999999999888888 899999999999999999
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC--CCCCCCCHHHHHhhcc-cCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR--PPDFAIPIEELKSTIS-KNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~--~~~~~~d~~~l~~~i~-~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
++++||+|+++.|+|.++...+...|++++.+|++ +.++.+|++.++++++ +++++|++++||||||.+++.+++++
T Consensus 105 l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~ 184 (391)
T 3dzz_A 105 FTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKR 184 (391)
T ss_dssp HSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred hCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999985 2345689999999998 68999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCC-CCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhh-c
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPG-MYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHS-F 342 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~-~ 342 (434)
|+++|++||+++|+||+|.++.+++. ..++..+.. ..++++++.|+||.+|++|+|+||++++ +++++.++.... .
T Consensus 185 i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~ 264 (391)
T 3dzz_A 185 IAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLA 264 (391)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhh
Confidence 99999999999999999999988763 445555532 2578999999999999999999999997 889888877654 3
Q ss_pred cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh-C-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHH
Q 013883 343 LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA-V-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLI 420 (434)
Q Consensus 343 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll 420 (434)
..++.+.+.+.++..+|+..++++++++++++++++.+.+.|++ + |+.+.++++++++|+++...+. +..+++++|+
T Consensus 265 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ 343 (391)
T 3dzz_A 265 GIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGM-NAEDFCKYLR 343 (391)
T ss_dssp TCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCS-CHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCC-CHHHHHHHHH
Confidence 45688899999999999877788999999999999999999998 4 8999999999999998754333 5788999998
Q ss_pred HhcCeEEECCCCCC
Q 013883 421 KEVGVVAIPTSVFY 434 (434)
Q Consensus 421 ~~~GV~v~pG~~F~ 434 (434)
+++||.+.||+.|.
T Consensus 344 ~~~gi~v~~g~~~~ 357 (391)
T 3dzz_A 344 EKTGLIISAGNGYR 357 (391)
T ss_dssp HHHCEECEESGGGC
T ss_pred HhCCEEEeCchhhC
Confidence 67799999998763
No 33
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=3.7e-44 Score=358.23 Aligned_cols=317 Identities=25% Similarity=0.441 Sum_probs=279.1
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+++.|+|+.|.++++.++.+.+++ +++.+....|++..|..+||+++++++.+.+|..++++ +|++|+|+++++.+++
T Consensus 42 g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~-~v~~~~g~t~a~~~~~ 119 (409)
T 2gb3_A 42 GVRIHHLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPE-NVLVTNGGSEAILFSF 119 (409)
T ss_dssp TCEEEECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGG-GEEEESHHHHHHHHHH
T ss_pred CCCEEeccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHH-HEEEeCCHHHHHHHHH
Confidence 346899999999888888899999 88866556899888999999999999998889888888 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
.+++++||+|++++|+|+++...+...|++++.+|+++ +++.+ ++.|++++++++++|++++|+||||.+++.+++++
T Consensus 120 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~ 198 (409)
T 2gb3_A 120 AVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRY 198 (409)
T ss_dssp HHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999875 35555 88999999888999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeCh-hhHHHHHHHhhcccc
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP-HLTWGVRQAHSFLTF 345 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~-~~~~~l~~~~~~~~~ 345 (434)
|+++|++||+++|+||+|.++.+++...++ +.+..++++++.||||.+|++|+|+||+++++ ++++.++.......
T Consensus 199 i~~~~~~~~~~li~Dea~~~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~- 275 (409)
T 2gb3_A 199 LVEIAERHGLFLIVDEVYSEIVFRGEFASA--LSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRL- 275 (409)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCSSCCCCG--GGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSC-
T ss_pred HHHHHHHcCCEEEEECcccccccCCCCCCc--cccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhccC-
Confidence 999999999999999999998887644333 22234678999999999999999999999998 99998887766555
Q ss_pred CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEe-ecCCeeEEEeeecCCCCCCCHHHHHHHHHHh--
Q 013883 346 ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKV-FPSSGTYFVVVDHTPFGHETDIAFCEYLIKE-- 422 (434)
Q Consensus 346 ~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~-- 422 (434)
+.+.+.|.++..+|+...+++++++++++++++.+.+.|++.|+.+ ..+++++++|+++. + .+..+++++|+++
T Consensus 276 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~l~~~~~ 352 (409)
T 2gb3_A 276 APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELP--V-EDAEEFARWMLTDFN 352 (409)
T ss_dssp CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEECS--S-SCHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCCCeeEEEEEEeC--C-CCHHHHHHHHHhccc
Confidence 8889999999999987677889999999999999999999889888 78888999998874 2 2577899999877
Q ss_pred ---cCeEEECCCCC
Q 013883 423 ---VGVVAIPTSVF 433 (434)
Q Consensus 423 ---~GV~v~pG~~F 433 (434)
+||.+.||..|
T Consensus 353 ~~~~gi~v~~g~~f 366 (409)
T 2gb3_A 353 MDGETTMVAPLRGF 366 (409)
T ss_dssp BTTEEEECEEGGGG
T ss_pred cccCcEEEeCchHh
Confidence 69999999766
No 34
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.5e-44 Score=357.30 Aligned_cols=309 Identities=38% Similarity=0.695 Sum_probs=271.5
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
++.|||+.|.|++++++.+.+++.+++.+ ...|++..|..+||++++++++ ++++ +|++++|+++++.+++.
T Consensus 25 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~~------~~~~-~v~~~~g~~~a~~~~~~ 96 (381)
T 1v2d_A 25 LGAVNLGQGFPSNPPPPFLLEAVRRALGR-QDQYAPPAGLPALREALAEEFA------VEPE-SVVVTSGATEALYVLLQ 96 (381)
T ss_dssp HTCEECCCCSCSSCCCHHHHHHHHHHTTT-SCSCCCTTCCHHHHHHHHHHHT------SCGG-GEEEESSHHHHHHHHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHHH-hcCCCCCCCCHHHHHHHHHhcC------CChh-hEEEcCChHHHHHHHHH
Confidence 47899999999988899999999998876 5679888899999999999975 5667 79999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC--CCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR--PPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~--~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
+++++||+|++++|+|+.+...++..|++++.++.+ ++++.+|++.+++++++++++|++++|+||||.+++.+++++
T Consensus 97 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~ 176 (381)
T 1v2d_A 97 SLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEA 176 (381)
T ss_dssp HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHH
Confidence 999999999999999999999999999999999987 446889999999999888999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccC
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~ 346 (434)
|+++|++||+++|+||+|.++.++....++..+ ..++++++.|+||.+|++|+|+||+++++++++.++.......++
T Consensus 177 i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~--~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 254 (381)
T 1v2d_A 177 IARLARAHDLFLISDEVYDELYYGERPRRLREF--APERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFS 254 (381)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH--CTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSS
T ss_pred HHHHHHHcCCEEEEEcCccccccCCCCCCHHHh--cCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhcccC
Confidence 999999999999999999998873233344433 357889999999999999999999999999999988777666788
Q ss_pred CchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcC
Q 013883 347 TSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVG 424 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~G 424 (434)
.+.+.|.++..+|+.. ++++++++++++++++.+.+.|++.|+++..+++++|+|+++... + +.++++++|
T Consensus 255 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~------~-~~~~l~~~g 327 (381)
T 1v2d_A 255 APTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGW------D-AFRLVEEAR 327 (381)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTC------C-HHHHHHHTC
T ss_pred CCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEecChH------h-HHHHHHhCC
Confidence 8999999999999854 567888999999999999999999999998888899999987532 1 455567779
Q ss_pred eEEECCCCCC
Q 013883 425 VVAIPTSVFY 434 (434)
Q Consensus 425 V~v~pG~~F~ 434 (434)
|.+.||+.|+
T Consensus 328 i~v~~g~~~~ 337 (381)
T 1v2d_A 328 VALIPASAFY 337 (381)
T ss_dssp EECEEGGGGC
T ss_pred EEEecchHhC
Confidence 9999997663
No 35
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=8.7e-45 Score=358.16 Aligned_cols=311 Identities=20% Similarity=0.306 Sum_probs=273.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.|||+.|.+++++++.+.+++.+.+ .....|++..|..+||+++++++.+.+|..++++ +|++|+|+++++..++.+
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~-~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~-~i~~t~g~~~al~~~~~~ 101 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHT-HSLNIYPKSAFEESLRAAQRGFFKRRFKIELKEN-ELISTLGSREVLFNFPSF 101 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTG-GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGG-GEEEESSSHHHHHHHHHH
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhh-hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHH-HEEECcCcHHHHHHHHHH
Confidence 78999999999999999999888777 3457899988999999999999998889877888 899999999999999999
Q ss_pred ccCC--CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 190 LINP--GDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 190 l~~~--gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
++++ ||+|++++|+|.++...++..|++++.++++++ .++++ .+++++.+++++|++++||||||.+++.+++++|
T Consensus 102 ~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~-~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i 179 (376)
T 3ezs_A 102 VLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKE-NDFTP-SLNEKELQEVDLVILNSPNNPTGRTLSLEELISW 179 (376)
T ss_dssp HTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGG-GTSCC-CCCHHHHHHCSEEEECSSCTTTCCCCCHHHHHHH
T ss_pred HcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCC-CCcch-hHHhhhccCCCEEEEcCCCCCcCCCCCHHHHHHH
Confidence 9999 999999999999999999999999999999863 23343 5666676789999999999999999999999999
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCCCccccCCCC-----CCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhc
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPG-----MYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSF 342 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~-----~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~ 342 (434)
+++|++||+++|+||+|.++.+++...++..... ..++++++.||||.+|++|+|+||+++++++++.+......
T Consensus 180 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 259 (376)
T 3ezs_A 180 VKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRAY 259 (376)
T ss_dssp HHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHTT
T ss_pred HHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHhh
Confidence 9999999999999999999988775444433211 35789999999999999999999999999999999988877
Q ss_pred cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHh
Q 013883 343 LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKE 422 (434)
Q Consensus 343 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 422 (434)
.+++.+.+.|.++..+|++ .+++++++++++++++.+.+.|+ ++. .+++++|+|+++. +..+++++|+++
T Consensus 260 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~--~~~--~~~~~~~~~~~~~-----~~~~~~~~l~~~ 329 (376)
T 3ezs_A 260 LGYTSANAIQKASEAAWLD-DRHAEFFRNIYANNLKLARKIFK--NTL--IYPYSFYVYLPVQ-----NGENFAKTLYQN 329 (376)
T ss_dssp TCCCCCHHHHHHHHHHHHC-SHHHHHHHHHHHHHHHHHHHHST--TCC--CCSBSSEEEEECS-----CHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHhc--CCC--CCCcceEEEEECC-----CHHHHHHHHHHh
Confidence 7889999999999999997 55789999999999999999998 665 6788889999874 477899999876
Q ss_pred cCeEEECCCCCC
Q 013883 423 VGVVAIPTSVFY 434 (434)
Q Consensus 423 ~GV~v~pG~~F~ 434 (434)
+||.+.||+.|+
T Consensus 330 ~gi~v~~g~~~~ 341 (376)
T 3ezs_A 330 EGIITLPALYLG 341 (376)
T ss_dssp HCCBCEEGGGGC
T ss_pred CCEEEeCcHHhC
Confidence 799999998774
No 36
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=2.8e-44 Score=359.40 Aligned_cols=316 Identities=19% Similarity=0.262 Sum_probs=265.4
Q ss_pred CCeeEeCCCCC-----CCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 109 HGAINLGQGFP-----NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 109 ~~~i~l~~g~p-----~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
.++|||+.|.| ++++++.+.+++.+........|.+..|.++||+++++++.+..+.. +++ +|++|+|+++++
T Consensus 37 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~-~~~-~i~~t~g~~~al 114 (413)
T 3t18_A 37 EAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPE-GYI-SAIATPGGTGAI 114 (413)
T ss_dssp GGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCS-SEE-EEEEESHHHHHH
T ss_pred cceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCcc-ccC-cEEEcCccHHHH
Confidence 47899999987 77788888888766443344679998999999999999997766643 444 899999999999
Q ss_pred HHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc----CCc-EEEecCC-CCCccc
Q 013883 184 AATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK----NTR-AILMNTP-HNPTGK 257 (434)
Q Consensus 184 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----~~~-~i~~~~p-~NPTG~ 257 (434)
..++.+++++||+|++++|+|..|...++..|++++.+|+.++++++|++.+++++++ +++ ++++++| |||||.
T Consensus 115 ~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~ 194 (413)
T 3t18_A 115 RSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGY 194 (413)
T ss_dssp HHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCC
T ss_pred HHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCC
Confidence 9999999999999999999999999999999999999999655689999999999976 677 7788899 999999
Q ss_pred CCCHHHHHHHHHHHH------HcCcEEEEcCcCCccccCCCC-ccc-cCCCCCCCc--eEEEccCChhhccccceeeeEE
Q 013883 258 MFTREELNVIASLCI------ENDVLVFSDEVYDKLAFEMDH-ISI-ASLPGMYER--TVTMNSLGKTFSLTGWKIGWAI 327 (434)
Q Consensus 258 ~~~~e~l~~i~~la~------~~~~~iI~Deay~~~~~~~~~-~~~-~~~~~~~~~--~i~i~S~SK~~g~~G~R~G~~~ 327 (434)
+++.+++++|+++|+ +||++||+||+|.+|.+++.. .++ .......++ +++++||||.+|++|+|+||++
T Consensus 195 ~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~ 274 (413)
T 3t18_A 195 SLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAV 274 (413)
T ss_dssp CCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEE
Confidence 999999999999999 899999999999999887643 232 223333445 4888999999999999999999
Q ss_pred e---ChhhHHHHHHHhhcc----ccCCchHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHHHhhhCCCEeecCC
Q 013883 328 A---PPHLTWGVRQAHSFL----TFATSTPMQWAATAALRAPE-----TYYEELKRDYSAKKAILVEGLNAVGFKVFPSS 395 (434)
Q Consensus 328 ~---~~~~~~~l~~~~~~~----~~~~~~~~q~a~~~~L~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 395 (434)
+ ++++++.+...+... ..+++.++|.++..+|++.+ +++++++++++++++.+.+.|++.|+.+.+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 354 (413)
T 3t18_A 275 GISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKENKLTMIPYF 354 (413)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCC
T ss_pred EecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCC
Confidence 9 999999887765433 24578888999888887632 34557788999999999999999999999999
Q ss_pred eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 396 GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
++||+|+++. +..++++.| +++||.+.||..
T Consensus 355 ~~~~~~~~~~-----~~~~~~~~l-~~~gv~v~~g~~ 385 (413)
T 3t18_A 355 GGFFTFIPTD-----KAFDIVKDL-EKENIFTIPSAK 385 (413)
T ss_dssp SSSCEEEECS-----CHHHHHHHH-HHTTEECEECSS
T ss_pred ceEEEEeCCC-----CHHHHHHHH-HhCCEEEecCCC
Confidence 9999998762 577888877 556999999864
No 37
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=6e-44 Score=359.17 Aligned_cols=314 Identities=22% Similarity=0.350 Sum_probs=270.8
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHc-----CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRD-----GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
.++|+|+.|+++++.++.+.+++.+++.+ +...|.+..|..+|++++++++.+ +..++++ +|++++|+++++
T Consensus 56 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~-~i~~t~G~~~al 132 (432)
T 3ei9_A 56 AQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDD-DVFVSDGAKCDI 132 (432)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGG-GEEEESCHHHHH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcc-eEEECCChHHHH
Confidence 47899999999999999999999998873 446798888999999999999974 5556777 899999999999
Q ss_pred HHHHHHccCCCCeEEEcCCCchhHHHHHHHcCC------------EEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecC
Q 013883 184 AATILGLINPGDEVILFAPFYDSYEATLSMAGA------------KIKCITLRPP-DFAIPIEELKSTISKNTRAILMNT 250 (434)
Q Consensus 184 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~------------~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~ 250 (434)
.+ +..++++||.|++++|+|+++...+...|. +++.++++++ ++..|++. .+++++|++++
T Consensus 133 ~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~v~l~~ 206 (432)
T 3ei9_A 133 SR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VGRTDIIFFCS 206 (432)
T ss_dssp HH-HHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CCCCSEEEEES
T ss_pred HH-HHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----CCCCCEEEEeC
Confidence 97 577889999999999999999999988884 6788888752 45556443 35789999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeCh
Q 013883 251 PHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP 330 (434)
Q Consensus 251 p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~ 330 (434)
||||||.+++.+++++|+++|++||++||+||+|.++.+++...++..+.+..++++++.||||.+|++|+|+||+++++
T Consensus 207 p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~ 286 (432)
T 3ei9_A 207 PNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPK 286 (432)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEECh
Confidence 99999999999999999999999999999999999998887666666665556789999999999999999999999998
Q ss_pred hh--------HHHHHHHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEe
Q 013883 331 HL--------TWGVRQAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVV 401 (434)
Q Consensus 331 ~~--------~~~l~~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 401 (434)
++ ++.+........++++.++|.++..+|.+ ..+++++++++++++++.+.+.|+++|+.+.++++++|+|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 366 (432)
T 3ei9_A 287 KLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVW 366 (432)
T ss_dssp TCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECSSSSEEE
T ss_pred HHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE
Confidence 88 77787776666677899999999988864 3467899999999999999999999999998888888999
Q ss_pred eecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 402 VDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 402 ~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+++. + .++.+++.+|++++||.+.||+.|+
T Consensus 367 ~~~~--~-~~~~~~~~~ll~~~gv~v~~g~~f~ 396 (432)
T 3ei9_A 367 VHFP--N-QSSWDVFAEILEKTHVVTTPGSGFG 396 (432)
T ss_dssp EECT--T-SCHHHHHHHHHHHHCEECEEGGGGC
T ss_pred EECC--C-CCHHHHHHHHHHHCCEEEeCchHhC
Confidence 9985 2 2577899999988899999998774
No 38
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=6.1e-44 Score=358.53 Aligned_cols=317 Identities=23% Similarity=0.294 Sum_probs=262.7
Q ss_pred CCeeEeCCCCCCCCCcHH--HHHHH---------HHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCC-------C
Q 013883 109 HGAINLGQGFPNFDGPDF--VKDAA---------IQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDP-------E 170 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~--v~~~~---------~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-------~ 170 (434)
++.|+|+.|.|+....|. ...++ .+... ....|.+..|.++||+++++++.+.+|...++ +
T Consensus 31 ~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~ 109 (425)
T 2r2n_A 31 KSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMK-RALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQM 109 (425)
T ss_dssp TTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHH-HHTSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCE
T ss_pred CCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchh-hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcC
Confidence 478999999998654331 00000 11111 12579999999999999999999888987643 5
Q ss_pred CcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc----------
Q 013883 171 KEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS---------- 240 (434)
Q Consensus 171 ~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~---------- 240 (434)
+|++|+|+++++.+++.+++++||+|++++|+|+++...++..|++++.+|+++ .++|++.|+++++
T Consensus 110 -~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~d~~~l~~~l~~~~~~~~~~~ 186 (425)
T 2r2n_A 110 -DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDE--SGIVPDSLRDILSRWKPEDAKNP 186 (425)
T ss_dssp -EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEECEET--TEECHHHHHHHHTTSCSTTSSST
T ss_pred -cEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeCcCC--CCCCHHHHHHHHHhhhccccccc
Confidence 899999999999999999999999999999999999999999999999999874 3589999999886
Q ss_pred --cCCcEEEe-cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhh
Q 013883 241 --KNTRAILM-NTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTF 316 (434)
Q Consensus 241 --~~~~~i~~-~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~ 316 (434)
+++++|++ ++||||||.+++.+++++|+++|++||++||+||+|.++.|++. ..++..+. ..++++++.||||.+
T Consensus 187 ~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~i~~~s~SK~~ 265 (425)
T 2r2n_A 187 QKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMD-VDGRVIRADSFSKII 265 (425)
T ss_dssp TSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGC-TTSCEEEEEESTTTT
T ss_pred cCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccC-CCCCEEEEccchhhc
Confidence 35788866 68999999999999999999999999999999999999988764 34555554 246899999999999
Q ss_pred ccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC-----hHHHHHHHHHHHHHHHHHHHHhhhC--CC
Q 013883 317 SLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP-----ETYYEELKRDYSAKKAILVEGLNAV--GF 389 (434)
Q Consensus 317 g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~--g~ 389 (434)
+ +|+|+||+++++++++.+...+....++.+.+.|.++..+|++. .++++++++.++++++.+.+.|++. |+
T Consensus 266 ~-~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 344 (425)
T 2r2n_A 266 S-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGL 344 (425)
T ss_dssp C-STTCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred c-CccceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 9 99999999999999999988887778899999999999999862 3678889999999999999999874 76
Q ss_pred -EeecCCeeEEEeeecCCCCCCCHHHH-HHHHHHhcCeEEECCCCCC
Q 013883 390 -KVFPSSGTYFVVVDHTPFGHETDIAF-CEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 390 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Ll~~~GV~v~pG~~F~ 434 (434)
.+..+++++|+|+++... . ++.++ .+.| .++||.+.||+.|+
T Consensus 345 ~~~~~p~~g~~~~~~~~~~-~-~~~~~~~~~l-~~~gv~v~pg~~f~ 388 (425)
T 2r2n_A 345 AEWHVPAAGMFLWIKVKGI-N-DVKELIEEKA-VKMGVLMLPGNAFY 388 (425)
T ss_dssp EEECCCSBSSEEEEEETTC-S-CCHHHHHTHH-HHTTEECEEGGGGS
T ss_pred eEEeCCCceEEEEEEeCCC-C-CHHHHHHHHH-HHCCcEEechhhhc
Confidence 466788999999998542 2 34454 4545 56799999998774
No 39
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.3e-43 Score=351.27 Aligned_cols=321 Identities=18% Similarity=0.326 Sum_probs=281.3
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
.+.|+|+.|.+++++++.+.+++.+++.+..+.|.+ +..++++++++++.+.+|..++++ +|++++|+++++.+++.
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~-~v~~~~g~~~a~~~~~~ 108 (391)
T 4dq6_A 32 NDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIKSE-WLIYSPGVIPAISLLIN 108 (391)
T ss_dssp SCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCCGG-GEEEESCHHHHHHHHHH
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCcHH-HeEEcCChHHHHHHHHH
Confidence 578999999999999999999999998776667776 568999999999999999888888 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC-C--CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR-P--PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-~--~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+++++||+|+++.|+|.++...++..|++++.+|++ + .++.+|++.+++++++ +++|++++|+||||.+++.++++
T Consensus 109 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~ 187 (391)
T 4dq6_A 109 ELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDELK 187 (391)
T ss_dssp HHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHHH
T ss_pred HhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHHH
Confidence 999999999999999999999999999999999987 2 3456899999999988 99999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCC-CCceEEEccCChhhccccceeeeEEeCh-hhHHHHHHHhhc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGM-YERTVTMNSLGKTFSLTGWKIGWAIAPP-HLTWGVRQAHSF 342 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~~~~~~-~~~~~l~~~~~~ 342 (434)
+|+++|++||+++|+||+|.++.+++. ..++..+... .++++++.|+||.+|++|+|+||+++++ ++++.++.....
T Consensus 188 ~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~ 267 (391)
T 4dq6_A 188 KLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTR 267 (391)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHh
Confidence 999999999999999999999988764 3344444321 3688999999999999999999999986 888888776543
Q ss_pred -cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh-C-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHH
Q 013883 343 -LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA-V-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYL 419 (434)
Q Consensus 343 -~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 419 (434)
..++.+.+.+.++..+|+..++++++++++++++++.+.+.|++ + |+.+.++++++++|++++..+. +..+++++|
T Consensus 268 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l 346 (391)
T 4dq6_A 268 IDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGL-SDEELESIL 346 (391)
T ss_dssp TTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCC-CHHHHHHHH
T ss_pred hcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCC-CHHHHHHHH
Confidence 34578889999999999877788999999999999999999987 3 8999999999999998754333 578899999
Q ss_pred HHhcCeEEECCCCCC
Q 013883 420 IKEVGVVAIPTSVFY 434 (434)
Q Consensus 420 l~~~GV~v~pG~~F~ 434 (434)
++++||.+.||+.|+
T Consensus 347 ~~~~gi~v~~g~~~~ 361 (391)
T 4dq6_A 347 VQKGKVALNQGNSFG 361 (391)
T ss_dssp HHTTCEECEEGGGGC
T ss_pred HHhCCEEeeCchhhC
Confidence 877799999998763
No 40
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=5.8e-44 Score=355.20 Aligned_cols=320 Identities=19% Similarity=0.307 Sum_probs=277.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.|||+.|.+++++++.+.+++.+++......|++. ..+||+++++++.+.+|.+++++ +|++|+|+++++.+++.+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~-~v~~t~g~~~a~~~~~~~ 108 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQTD-WIINTAGVVPAVFNAVRE 108 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCGG-GEEEESSHHHHHHHHHHH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCChh-hEEEcCCHHHHHHHHHHH
Confidence 789999999988889999999999887666778775 79999999999998888777787 899999999999999999
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-C-CCCCCHHHHHhhcc-cCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-P-DFAIPIEELKSTIS-KNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~-~~~~d~~~l~~~i~-~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
++++||+|++++|+|+++...+...|++++.+|+++ + ++.+|++.++++++ +++++|++++||||||.+++.+++++
T Consensus 109 l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~ 188 (399)
T 1c7n_A 109 FTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQK 188 (399)
T ss_dssp HCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred hcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHH
Confidence 999999999999999999999999999999998863 2 24589999999998 68899999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCC-CCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhhcc
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPG-MYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFL 343 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~ 343 (434)
|+++|++||+++|+||+|.++.+++. ..++..+.. ..++++++.|+||.+|++|+|+||++++ +++++.++......
T Consensus 189 i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~ 268 (399)
T 1c7n_A 189 IKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDAT 268 (399)
T ss_dssp HHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhc
Confidence 99999999999999999999988663 334444421 1467899999999999999999999997 57888888776655
Q ss_pred cc-CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh-C-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHH
Q 013883 344 TF-ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA-V-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLI 420 (434)
Q Consensus 344 ~~-~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll 420 (434)
.+ +.+.+.|.++..+|+..++++++++++++++++.+.+.|++ + |+.+.++++++++|+++...+. +..+++++|+
T Consensus 269 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ 347 (399)
T 1c7n_A 269 SGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKM-DHKAMEEFMI 347 (399)
T ss_dssp TCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCC-CHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCC-CHHHHHHHHH
Confidence 44 67888999999999876778999999999999999999988 5 8888889999999998754322 4778999888
Q ss_pred HhcCeEEECCCCC
Q 013883 421 KEVGVVAIPTSVF 433 (434)
Q Consensus 421 ~~~GV~v~pG~~F 433 (434)
+++||.+.||+.|
T Consensus 348 ~~~gi~v~~g~~~ 360 (399)
T 1c7n_A 348 HKAQIFFDEGYIF 360 (399)
T ss_dssp HTTCCCCEEGGGG
T ss_pred HhCCEEEeCcccc
Confidence 6779999999766
No 41
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=4.2e-45 Score=364.94 Aligned_cols=331 Identities=16% Similarity=0.177 Sum_probs=268.8
Q ss_pred CCchHHHHHhhhccccHHHHHHHHhhcCCeeEeCCCCC-CCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHH
Q 013883 82 LQPQQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFP-NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFK 160 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 160 (434)
.+++.+.+++++... +++|||+.|.| ++++++.+.+++.++.......|.+..|.++||+++++++.
T Consensus 26 ~~i~~~~~~~~~~~~------------~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~ 93 (409)
T 4eu1_A 26 DPILGLGQDFRMDPA------------KRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQKLCF 93 (409)
T ss_dssp -CHHHHHHHHHHCCC------------SSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHhhCCC------------cCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHHHHHc
Confidence 344666666655433 37899999987 88888888888877754456789999999999999999985
Q ss_pred hhcCCCCCCCCcEE--EcCChHHHHHHH---HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC-CCCCCCCHHH
Q 013883 161 KDSGLEVDPEKEVT--VTSGCTEAIAAT---ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR-PPDFAIPIEE 234 (434)
Q Consensus 161 ~~~g~~~~~~~~i~--~t~G~~~ai~~~---~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-~~~~~~d~~~ 234 (434)
+..+..++++ +|. .+.|+++++.++ +..++++||+|++++|+|.++...++..|++++.+|++ ++++++|++.
T Consensus 94 ~~~~~~~~~~-~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 172 (409)
T 4eu1_A 94 GPTCAALRDG-RIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAG 172 (409)
T ss_dssp CSSCHHHHTT-CEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHH
T ss_pred CCCchhhccC-ceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHH
Confidence 4333223355 674 488888888765 44567899999999999999999999999999999984 3568899999
Q ss_pred HHhhccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC---CCccccCCCCCCCceEE
Q 013883 235 LKSTISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM---DHISIASLPGMYERTVT 308 (434)
Q Consensus 235 l~~~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~---~~~~~~~~~~~~~~~i~ 308 (434)
+++++++ +++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++ +...+..+.+..+++++
T Consensus 173 l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 252 (409)
T 4eu1_A 173 MLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIV 252 (409)
T ss_dssp HHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEE
T ss_pred HHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEE
Confidence 9999962 45666779999999999999999999999999999999999999998876 23344444344678999
Q ss_pred EccCChhhccccceeeeE---EeChh----hHHHHHHHhhccccCCchHHHHHHHHHHhCC------hHHHHHHHHHHHH
Q 013883 309 MNSLGKTFSLTGWKIGWA---IAPPH----LTWGVRQAHSFLTFATSTPMQWAATAALRAP------ETYYEELKRDYSA 375 (434)
Q Consensus 309 i~S~SK~~g~~G~R~G~~---~~~~~----~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~------~~~~~~~~~~~~~ 375 (434)
++||||.+|++|+|+||+ +.+++ +++.++...+...++++.+.|.++..+|++. .++++++++++++
T Consensus 253 ~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 332 (409)
T 4eu1_A 253 AQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAE 332 (409)
T ss_dssp EEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999996 45666 6677777666667788899999999999975 3447788999999
Q ss_pred HHHHHHHHhhhCC----CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 376 KKAILVEGLNAVG----FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 376 ~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+++.+.+.|++.| +.+.++++++|+|+++ +.+++.+|++++||.+.||..
T Consensus 333 ~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ll~~~gv~v~p~~R 386 (409)
T 4eu1_A 333 VRKRLVSELKACGSVHDWSHIERQVGMMAYTGL-------TREQVELLRSEYHIYMTLNGR 386 (409)
T ss_dssp HHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCC-------CHHHHHHHHHHHCEECCTTCE
T ss_pred HHHHHHHHHHhcCCCCCcceecCCceEEEEeCC-------CHHHHHHHHHcCCEEEcCCCE
Confidence 9999999999987 7888899999999765 236788888888999999853
No 42
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=4.4e-44 Score=359.53 Aligned_cols=333 Identities=20% Similarity=0.316 Sum_probs=280.9
Q ss_pred hccccHHHHHHHHhhcCCeeEeCCCCCCCC--CcHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHhhcCCC-
Q 013883 93 KFKTTIFTQMSMLAIKHGAINLGQGFPNFD--GPDFVKDAAIQAIRDG---KNQYARGHGVPEFNSAIASRFKKDSGLE- 166 (434)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~--~~~~v~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~- 166 (434)
..+.+.+.++.....+++.|||+.|.|+.. +++.+.+++.++++.. ...|.+..|..+||+++++++.+.+|.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~ 106 (425)
T 1vp4_A 27 NMKSSIIREILKFAADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITG 106 (425)
T ss_dssp TCCCCCHHHHTTTTTSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCS
T ss_pred cCCCcHHHHHHHhccCCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCC
Confidence 333333444444444568899999987654 6778899988887653 3679888899999999999998777876
Q ss_pred CCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 167 VDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 167 ~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
++++ +|++|+|+++++.+++.+++++||+|++++|+|+++...++..|++++.+|.++ + ++|++.+++++++
T Consensus 107 ~~~~-~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~-~~d~~~l~~~l~~~~~~~ 183 (425)
T 1vp4_A 107 LDED-NLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLED-D-GMDLNVLERKLSEFDKNG 183 (425)
T ss_dssp CCGG-GEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET-T-EECHHHHHHHHHHHHHTT
T ss_pred CCcc-cEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCC-C-CCCHHHHHHHHHhhhhcc
Confidence 7777 899999999999999999999999999999999999999999999999999875 3 4899999998876
Q ss_pred ---CCcEE-EecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC-ccccCCCCCCCceEEEccCChhh
Q 013883 242 ---NTRAI-LMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDH-ISIASLPGMYERTVTMNSLGKTF 316 (434)
Q Consensus 242 ---~~~~i-~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~ 316 (434)
++++| ++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++.. .++..+. ..++++++.||||.+
T Consensus 184 ~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~i~~~s~sK~~ 262 (425)
T 1vp4_A 184 KIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIG-GPERVVLLNTFSKVL 262 (425)
T ss_dssp CGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHH-CTTTEEEEEESTTTT
T ss_pred cCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhC-CCCCEEEEecccccc
Confidence 68887 47899999999999999999999999999999999999999886643 3443332 246789999999999
Q ss_pred ccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhC-----CC
Q 013883 317 SLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAV-----GF 389 (434)
Q Consensus 317 g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-----g~ 389 (434)
| +|+|+||+++++++++.+.......+++.+.+.|.++..+|++. ++++++++++++++++.+.+.|++. |+
T Consensus 263 ~-~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~ 341 (425)
T 1vp4_A 263 A-PGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGV 341 (425)
T ss_dssp C-GGGCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTC
T ss_pred c-cccceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence 9 99999999999999998887776667788999999999999875 5778889999999999999999875 68
Q ss_pred EeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 390 KVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
.+..+++++|+|++++. +. +..+++++|+++ ||.+.||+.|
T Consensus 342 ~~~~~~~g~~~~~~~~~-~~-~~~~l~~~l~~~-gi~v~~g~~f 382 (425)
T 1vp4_A 342 KWVKSEGGLFIWLTLPE-GF-DTWEMFEYAKRK-KVFYVPGRVF 382 (425)
T ss_dssp EECCCSBSSEEEEECCT-TC-CTTTTHHHHHHH-TEECEEGGGG
T ss_pred EEecCCccEEEEEEcCC-CC-CHHHHHHHHHHC-CCEEECchhh
Confidence 88888889999998753 22 356788888877 9999999876
No 43
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1.1e-43 Score=355.53 Aligned_cols=317 Identities=21% Similarity=0.273 Sum_probs=264.7
Q ss_pred cCCeeEeCCCCC-----CCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 108 KHGAINLGQGFP-----NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 108 ~~~~i~l~~g~p-----~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.++|||+.|.| ++++++.+.+++.+........|.+..|.++||+++++++.+.++.+. ++ +|++|+|++++
T Consensus 37 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~-~~-~i~~t~g~~~a 114 (418)
T 3rq1_A 37 RENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEG-HI-RSIATAGGTGG 114 (418)
T ss_dssp GGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSS-EE-EEEEESHHHHH
T ss_pred CCCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccc-cc-cEEECCchHHH
Confidence 347899999977 777888888877665443446799999999999999999987776542 33 79999999999
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc----CCc-EEEecCC-CCCcc
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK----NTR-AILMNTP-HNPTG 256 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----~~~-~i~~~~p-~NPTG 256 (434)
+..++.+++++||+|++++|+|.+|...+...|++++.+|++++++++|++.+++++++ +++ ++++++| |||||
T Consensus 115 l~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG 194 (418)
T 3rq1_A 115 IHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTG 194 (418)
T ss_dssp HHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTC
T ss_pred HHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCC
Confidence 99999999999999999999999999999999999999999765689999999999975 666 7788899 99999
Q ss_pred cCCCHHHHHHHHHHHH------HcCcEEEEcCcCCccccCCCC-ccc-cCCCCCCCc--eEEEccCChhhccccceeeeE
Q 013883 257 KMFTREELNVIASLCI------ENDVLVFSDEVYDKLAFEMDH-ISI-ASLPGMYER--TVTMNSLGKTFSLTGWKIGWA 326 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~------~~~~~iI~Deay~~~~~~~~~-~~~-~~~~~~~~~--~i~i~S~SK~~g~~G~R~G~~ 326 (434)
.+++.+++++|+++|+ +||+++|+||+|.+|.+++.. ..+ ....+..++ +++++||||.+|++|+|+||+
T Consensus 195 ~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~ 274 (418)
T 3rq1_A 195 YSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAM 274 (418)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEE
T ss_pred CCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEE
Confidence 9999999999999999 899999999999998876532 222 223333445 588999999999999999999
Q ss_pred Ee---ChhhHHHHHHHhhcc----ccCCchHHHHHHHHHHhCCh---HH---HHHHHHHHHHHHHHHHHHhhhCCCEeec
Q 013883 327 IA---PPHLTWGVRQAHSFL----TFATSTPMQWAATAALRAPE---TY---YEELKRDYSAKKAILVEGLNAVGFKVFP 393 (434)
Q Consensus 327 ~~---~~~~~~~l~~~~~~~----~~~~~~~~q~a~~~~L~~~~---~~---~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 393 (434)
++ ++++++.+...+... ..+++.++|.++..+|++.+ .| +++++++++++++.+.+.|+++|+++.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 354 (418)
T 3rq1_A 275 IGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLP 354 (418)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred EEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99 899998887765432 24678899999999998742 23 3466788999999999999988999999
Q ss_pred CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 394 SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
++++||+|+++. +..++++.| +++||.++||..
T Consensus 355 ~~~~~~~~~~~~-----~~~~~~~~l-~~~gi~v~~g~~ 387 (418)
T 3rq1_A 355 YRGGFFITIPTD-----SANAICEEL-KKEHIYVIALAN 387 (418)
T ss_dssp CCSSSEEEEECT-----THHHHHHHH-HHTTEECEECSS
T ss_pred CCceEEEEcCCC-----CHHHHHHHH-HhCCEEEecCCC
Confidence 999999998762 477888766 566999999864
No 44
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=4.6e-43 Score=347.82 Aligned_cols=318 Identities=20% Similarity=0.293 Sum_probs=272.7
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHH-HHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPE-FNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~-lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
+.|||+.|.+++++++.+.+++.+++......|++. ..+ ||+++++++.+.+|..++++ +|++|+|+++++.+++.
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~-~v~~t~g~~~al~~~~~ 105 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQ-TVVYGPSVIYMVSELIR 105 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGG-GEEEESCHHHHHHHHHH
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHH-HEEEcCCHHHHHHHHHH
Confidence 689999999888889999999999887656778775 678 99999999998889888888 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC--CCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP--DFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~--~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+++++||+|+++.|+|+++...++..|++++.+|++++ ++.+|++.+++++++ ++++|++++||||||.+++.++++
T Consensus 106 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~ 185 (390)
T 1d2f_A 106 QWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELE 185 (390)
T ss_dssp HSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHH
T ss_pred HhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHH
Confidence 99999999999999999999999999999999998753 346899999999986 789999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhh-c
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHS-F 342 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~-~ 342 (434)
+|+++|++||+++|+||+|.++.+++. ..++..+.... ... +.||||.+|++|+|+||++++ +++++.++.... .
T Consensus 186 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~-~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 263 (390)
T 1d2f_A 186 IMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGD-WAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGR 263 (390)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSS-EEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhh-Hhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhh
Confidence 999999999999999999999988653 33444443211 023 999999999999999999985 788888877665 4
Q ss_pred ccc-CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh-C-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHH
Q 013883 343 LTF-ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA-V-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYL 419 (434)
Q Consensus 343 ~~~-~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 419 (434)
.++ +.+.+.+.++..+|+..++++++++++++++++.+.+.|++ + |+.+.++++++++|+++...+. +..+++++|
T Consensus 264 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l 342 (390)
T 1d2f_A 264 DGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNI-DDNALQKAL 342 (390)
T ss_dssp SCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCC-CHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCC-CHHHHHHHH
Confidence 454 77888899998989876778999999999999999999988 5 8888889999999998754322 477899989
Q ss_pred HHhcCeEEECCCCC
Q 013883 420 IKEVGVVAIPTSVF 433 (434)
Q Consensus 420 l~~~GV~v~pG~~F 433 (434)
++++||.+.||+.|
T Consensus 343 ~~~~gi~v~~g~~f 356 (390)
T 1d2f_A 343 IEQEKVAIMPGYTY 356 (390)
T ss_dssp HHTTCEECEEGGGG
T ss_pred HHHcCEEeeCcccc
Confidence 86779999999866
No 45
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=3.6e-43 Score=352.47 Aligned_cols=322 Identities=25% Similarity=0.346 Sum_probs=284.4
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+.+.|||+.|.++++.++.+.+++.+++.+..+.|.+.. .++++++++++.+.+|.+++++ +|++++|+++++..++
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~--~~l~~~l~~~l~~~~g~~~~~~-~v~~~~g~~ea~~~a~ 136 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYFN--DDLYQAVIDWERKEHDYAVVKE-DILFIDGVVPAISIAL 136 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCCC--HHHHHHHHHHHHHHHCCCCCGG-GEEEESCHHHHHHHHH
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCCC--HHHHHHHHHHHHHHhCCCCCHH-HEEEcCCHHHHHHHHH
Confidence 448899999999999999999999999887777787753 8999999999999999888888 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC--CCCCCCCHHHHHhhcc-cCCcEEEecCCCCCcccCCCHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR--PPDFAIPIEELKSTIS-KNTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~--~~~~~~d~~~l~~~i~-~~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
+.++++||+|+++.|+|+++...+...|.+++.+|++ +.++.+|++.++++++ +++++|++++||||||.+++.+++
T Consensus 137 ~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l 216 (421)
T 3l8a_A 137 QAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDL 216 (421)
T ss_dssp HHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHH
T ss_pred HHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHH
Confidence 9999999999999999999999999999999999986 3346789999999998 689999999999999999999999
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCC-CCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhh
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPG-MYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHS 341 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~ 341 (434)
++|+++|++||+++|+||+|.++.+++. ..++..+.. ..++++.+.|+||.+|++|+|+||++++ +++.+.+.....
T Consensus 217 ~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~ 296 (421)
T 3l8a_A 217 IKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQL 296 (421)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHH
Confidence 9999999999999999999999998764 344555532 3578899999999999999999999998 889888877653
Q ss_pred -ccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHH
Q 013883 342 -FLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYL 419 (434)
Q Consensus 342 -~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 419 (434)
...++.+.+++.++.++|+..++++++++++++++++.+.+.|++. ++.+.+++++|+.|+++...+. +..+++++|
T Consensus 297 ~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~-~~~~l~~~l 375 (421)
T 3l8a_A 297 ANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAI-AQPQLSEKL 375 (421)
T ss_dssp HTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTC-CTTHHHHHH
T ss_pred hcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCC-CHHHHHHHH
Confidence 3455788999999999998778889999999999999999999985 8999999999999998865333 466899999
Q ss_pred HHhcCeEEECCCCC
Q 013883 420 IKEVGVVAIPTSVF 433 (434)
Q Consensus 420 l~~~GV~v~pG~~F 433 (434)
++++||.+.||+.|
T Consensus 376 ~~~~gi~v~~g~~f 389 (421)
T 3l8a_A 376 QNEAKVVLNDGAHF 389 (421)
T ss_dssp HHTTCEECEEGGGG
T ss_pred HHhCCEEEECchhh
Confidence 88889999998766
No 46
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=3.5e-44 Score=360.68 Aligned_cols=317 Identities=18% Similarity=0.251 Sum_probs=272.8
Q ss_pred cCCeeEeCCCCC-CCCCcHHH--HHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCc---EEEcCChH
Q 013883 108 KHGAINLGQGFP-NFDGPDFV--KDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKE---VTVTSGCT 180 (434)
Q Consensus 108 ~~~~i~l~~g~p-~~~~~~~v--~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~---i~~t~G~~ 180 (434)
.++.|||+.|.| +++.++.+ .+++.+++.. ....|++..|..+||+++++++.+.+ ..++++ + |++|+|++
T Consensus 46 ~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~-~~~~i~~t~g~~ 123 (430)
T 2x5f_A 46 KSTTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSID-NMSRPIVTNALT 123 (430)
T ss_dssp TTCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGG-GBCCCEEESHHH
T ss_pred CCCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCC-ccceEEEcCCch
Confidence 347899999999 77776666 6655555543 45789998899999999999998764 667777 8 99999999
Q ss_pred HHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH-cCCEEEEEEcCCCCCCCCHHHHHhhccc---CCcEEEecCCCCCcc
Q 013883 181 EAIAATILGLINPGDEVILFAPFYDSYEATLSM-AGAKIKCITLRPPDFAIPIEELKSTISK---NTRAILMNTPHNPTG 256 (434)
Q Consensus 181 ~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~G~~~~~v~~~~~~~~~d~~~l~~~i~~---~~~~i~~~~p~NPTG 256 (434)
+++.+++.+++++||+|++++|+|+++...+.. .|++++.++++++++++|++.+++++++ +++++++++||||||
T Consensus 124 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG 203 (430)
T 2x5f_A 124 HGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTG 203 (430)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTC
T ss_pred HHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCC
Confidence 999999999999999999999999999999999 9999999998764478999999999987 789999999999999
Q ss_pred cCCCHHHHHHHHHHHHH-----cCcEEEEcCcCCccccCCC-Ccccc-CCCCCCCc---eEEEccCChhhccccceeeeE
Q 013883 257 KMFTREELNVIASLCIE-----NDVLVFSDEVYDKLAFEMD-HISIA-SLPGMYER---TVTMNSLGKTFSLTGWKIGWA 326 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~-----~~~~iI~Deay~~~~~~~~-~~~~~-~~~~~~~~---~i~i~S~SK~~g~~G~R~G~~ 326 (434)
.+++.+++++|+++|++ ||+++|+||+|.++.+++. ..++. .+....++ ++++.||||.+|++|+|+||+
T Consensus 204 ~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~ 283 (430)
T 2x5f_A 204 YTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFM 283 (430)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEE
T ss_pred CcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEE
Confidence 99999999999999999 9999999999999988764 23433 44333567 899999999999999999999
Q ss_pred Ee---ChhhHHHHHHHhhc----cccCCchHHHHHHHHHHh-CChHHHHH---HHHHHHHHHHHHHHHhh----hCCCEe
Q 013883 327 IA---PPHLTWGVRQAHSF----LTFATSTPMQWAATAALR-APETYYEE---LKRDYSAKKAILVEGLN----AVGFKV 391 (434)
Q Consensus 327 ~~---~~~~~~~l~~~~~~----~~~~~~~~~q~a~~~~L~-~~~~~~~~---~~~~~~~~~~~l~~~L~----~~g~~~ 391 (434)
++ ++++++.+...... .+++.+.+.|.++..+|+ +. ++.++ ++++++++++.+.+.|+ +.|+.+
T Consensus 284 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~ 362 (430)
T 2x5f_A 284 TFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNK-QFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQA 362 (430)
T ss_dssp EEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEE
T ss_pred EEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcee
Confidence 99 99999988876655 678899999999999999 74 45555 89999999999999998 678998
Q ss_pred ecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 392 FPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
.++++++|+|+++. +. +..+++++|++++||.+.||
T Consensus 363 ~~~~~g~~~~~~~~--~~-~~~~~~~~l~~~~gi~v~~g 398 (430)
T 2x5f_A 363 YDFNSGYFMAIKVH--DV-DPEALRKHLIDKYSIGVIAL 398 (430)
T ss_dssp CCCCBSSEEEEEES--SS-CHHHHHHHHHHHHCEECEEC
T ss_pred eCCCceEEEEeCCC--CC-CHHHHHHHHHHhCCEEEecC
Confidence 89999999999885 32 57789999987579999997
No 47
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=7.4e-44 Score=354.08 Aligned_cols=316 Identities=20% Similarity=0.217 Sum_probs=260.6
Q ss_pred CCeeEeCCC---CCCCCCc--HHHHHHHHH-HHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCC-cEEEcCChH
Q 013883 109 HGAINLGQG---FPNFDGP--DFVKDAAIQ-AIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEK-EVTVTSGCT 180 (434)
Q Consensus 109 ~~~i~l~~g---~p~~~~~--~~v~~~~~~-~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~-~i~~t~G~~ 180 (434)
+++|||+.| .|+.+++ +.+.+++.+ ++.+ ....|.+..|..++|+++++++.+.++..+++++ +|++|+|++
T Consensus 26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~ 105 (397)
T 3fsl_A 26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGS 105 (397)
T ss_dssp SCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred CCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcH
Confidence 378999999 4554444 899999988 8766 4568999899999999999999865554334542 689999999
Q ss_pred HHHHHHH--HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC-CCCCCCCHHHHHhhcc---cCCcEEEecCCCCC
Q 013883 181 EAIAATI--LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLR-PPDFAIPIEELKSTIS---KNTRAILMNTPHNP 254 (434)
Q Consensus 181 ~ai~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~---~~~~~i~~~~p~NP 254 (434)
+++.+++ .+++++||+|++++|+|.++...++..|++++.+++. ++++++|++.++++++ ++++++++++||||
T Consensus 106 ~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~np 185 (397)
T 3fsl_A 106 GALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNP 185 (397)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTT
T ss_pred HHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 9999994 4567999999999999999999999999999999984 3478899999999998 56788999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC--CCccccCCCCCCCceEEEccCChhhccccceeeeEEe---C
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM--DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA---P 329 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~--~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~---~ 329 (434)
||.+++.+++++|+++|++||+++|+||+|.++.+++ ...++..+....+++++++||||.+|++|+|+||+++ +
T Consensus 186 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~ 265 (397)
T 3fsl_A 186 TGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCED 265 (397)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSS
T ss_pred CCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCC
Confidence 9999999999999999999999999999999998873 2334444444568899999999999999999999975 3
Q ss_pred hhhHHHH----HHHhhccccCCchHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHhhhC----CCEeecCC
Q 013883 330 PHLTWGV----RQAHSFLTFATSTPMQWAATAALRAP------ETYYEELKRDYSAKKAILVEGLNAV----GFKVFPSS 395 (434)
Q Consensus 330 ~~~~~~l----~~~~~~~~~~~~~~~q~a~~~~L~~~------~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~ 395 (434)
++.+..+ +...+....+++.+.|.++..+|.+. ++++++++++++++++.+.+.|++. |+.+.+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 345 (397)
T 3fsl_A 266 AEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQ 345 (397)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHC
T ss_pred HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCC
Confidence 4555433 22223345667889999999999874 5678889999999999999999986 68888889
Q ss_pred eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 396 GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+++|+|+++ +. +++.++++++||.+.||.
T Consensus 346 ~~~~~~~~~------~~-~~~~~~l~~~gi~v~~g~ 374 (397)
T 3fsl_A 346 RGMFSYTGL------SA-AQVDRLREEFGVYLIASG 374 (397)
T ss_dssp CSSEEECCC------CH-HHHHHHHHTTCEECCTTC
T ss_pred ceEEEecCC------CH-HHHHHHHHhCCEEECCCC
Confidence 999999876 23 445666678899999985
No 48
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=361.99 Aligned_cols=309 Identities=21% Similarity=0.365 Sum_probs=253.9
Q ss_pred cHHHHHHHHHHHHc----CCCCCCCCCCcHHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHHccCCCC---
Q 013883 124 PDFVKDAAIQAIRD----GKNQYARGHGVPEFNSAIASRFKKDS-GLEVDPEKEVTVTSGCTEAIAATILGLINPGD--- 195 (434)
Q Consensus 124 ~~~v~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~-g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd--- 195 (434)
|..+.+++.+++.+ ....|++..|.++||+++++++.+.+ |.+++++ +|++|+|+++++..++.+++++||
T Consensus 103 P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~-~i~~t~G~~~ai~~~~~~l~~~gd~~~ 181 (498)
T 3ihj_A 103 PEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPD-NIYLTTGASDGISTILKILVSGGGKSR 181 (498)
T ss_dssp CHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGG-GEEEESSHHHHHHHHHHHHCCCCGGGS
T ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcc-cEEEcCCHHHHHHHHHHHHcCCCCCCC
Confidence 34444555666664 23679999999999999999999888 4888888 899999999999999999999875
Q ss_pred -eEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhccc-----CCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 196 -EVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISK-----NTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 196 -~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~-----~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+|+++.|+|+.|...+...|++++.++++++ +|++|++.|++++++ ++++|++++||||||.+++.+++++|+
T Consensus 182 d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~ 261 (498)
T 3ihj_A 182 TGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVI 261 (498)
T ss_dssp EEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHH
Confidence 9999999999999999999999999999863 689999999999977 589999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCC--CccccCCCC-------CCCceEEEccCChhh-ccccceeeeEE---eChhhHHH
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMD--HISIASLPG-------MYERTVTMNSLGKTF-SLTGWKIGWAI---APPHLTWG 335 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~--~~~~~~~~~-------~~~~~i~i~S~SK~~-g~~G~R~G~~~---~~~~~~~~ 335 (434)
++|++||++||+||+|..+.|++. ..++..+.. ...++++++||||.+ |++|+|+||++ .++++++.
T Consensus 262 ~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~ 341 (498)
T 3ihj_A 262 HFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQ 341 (498)
T ss_dssp HHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHH
T ss_pred HHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHH
Confidence 999999999999999999998753 334433311 123579999999999 89999999998 68999998
Q ss_pred HHHHhhccccCCchHHHHHHHHHHhCC-------hHH---HHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeec
Q 013883 336 VRQAHSFLTFATSTPMQWAATAALRAP-------ETY---YEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDH 404 (434)
Q Consensus 336 l~~~~~~~~~~~~~~~q~a~~~~L~~~-------~~~---~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 404 (434)
+.+... ...+++.+.|.++..+++.+ +++ .++++++++++++.+.+.|+++ |+.+.+++++||+|+++
T Consensus 342 l~~~~~-~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l 420 (498)
T 3ihj_A 342 LVKLLS-VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRI 420 (498)
T ss_dssp HHHHHH-HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEE
T ss_pred HHHHHh-ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEec
Confidence 887765 56788899999999988752 233 4567789999999999999997 99999999999999875
Q ss_pred CC----------CCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 405 TP----------FGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 405 ~~----------~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
.. .+..++..++.++++++||.+.||+.|+
T Consensus 421 ~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~ 460 (498)
T 3ihj_A 421 FIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFG 460 (498)
T ss_dssp CCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTC
T ss_pred cCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccC
Confidence 31 1332233337788888899999999885
No 49
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=1.3e-42 Score=346.29 Aligned_cols=316 Identities=26% Similarity=0.404 Sum_probs=273.1
Q ss_pred CeeEeCCCCCCCC--CcHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 110 GAINLGQGFPNFD--GPDFVKDAAIQAIRDG---KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 110 ~~i~l~~g~p~~~--~~~~v~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+.|||+.|.|+.. +++.+.+++.+++.+. .. |++..|..+||+++++++.+.+|.+++++ +|++|+|+++++.
T Consensus 35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~-~v~~t~g~t~a~~ 112 (407)
T 2zc0_A 35 KLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPE-NIVITIGGTGALD 112 (407)
T ss_dssp CCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGG-GEEEESHHHHHHH
T ss_pred ceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcc-eEEEecCHHHHHH
Confidence 7899999987654 5678899888888753 35 98888999999999999988888777787 8999999999999
Q ss_pred HHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc----c--CCcEE-EecCCCCCccc
Q 013883 185 ATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS----K--NTRAI-LMNTPHNPTGK 257 (434)
Q Consensus 185 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~----~--~~~~i-~~~~p~NPTG~ 257 (434)
+++.+++++||+|++++|+|+++...+...|++++.+|.++ + ++|++.++++++ + ++++| ++++|+||||.
T Consensus 113 ~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~ 190 (407)
T 2zc0_A 113 LLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDN-D-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGV 190 (407)
T ss_dssp HHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET-T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCC
T ss_pred HHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCC-C-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCc
Confidence 99999999999999999999999999999999999999875 2 489999999997 5 67887 47899999999
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC-ccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHH
Q 013883 258 MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDH-ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV 336 (434)
Q Consensus 258 ~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l 336 (434)
+++.+++++|+++|++||+++|+||+|.++.+++.. .++..+. ..++++++.||||.+| +|+|+||+++++++++.+
T Consensus 191 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~ 268 (407)
T 2zc0_A 191 TMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALD-NEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKV 268 (407)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGC-SSCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcC-CCCCEEEEcccccccC-CCcceEEEecCHHHHHHH
Confidence 999999999999999999999999999999886542 3444443 2368899999999999 999999999999999999
Q ss_pred HHHhhccccCCchHHHHHHHHHHhCC--h-HHHHHHHHHHHHHHHHHHHHhhhC--CCEeecCCeeEEEeeecCCCCCCC
Q 013883 337 RQAHSFLTFATSTPMQWAATAALRAP--E-TYYEELKRDYSAKKAILVEGLNAV--GFKVFPSSGTYFVVVDHTPFGHET 411 (434)
Q Consensus 337 ~~~~~~~~~~~~~~~q~a~~~~L~~~--~-~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~ 411 (434)
+.......++.+.+.|.++..+|+.. + +++++++++++++++.+.+.|++. |+.+..+.+++|+|++++. +. +
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~~-~ 346 (407)
T 2zc0_A 269 LMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPE-GA-D 346 (407)
T ss_dssp HHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECST-TC-C
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCC-CC-C
Confidence 88777777888999999999999875 3 567788899999999999999873 6887778888899998743 22 5
Q ss_pred HHHHHHHHHHhcCeEEECCCCC
Q 013883 412 DIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
..+++++|++++||.+.||+.|
T Consensus 347 ~~~l~~~l~~~~gi~v~~g~~~ 368 (407)
T 2zc0_A 347 GISFANELMEREGVVVVPGKPF 368 (407)
T ss_dssp HHHHHHHHHHHTCEECBCSGGG
T ss_pred HHHHHHHHHHhCCeEEECchhc
Confidence 7789999987779999999876
No 50
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.3e-42 Score=347.56 Aligned_cols=323 Identities=22% Similarity=0.365 Sum_probs=272.1
Q ss_pred CCeeEeCCCCC----CCCCcHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHh------hcCCCCCCCCcEEEcC
Q 013883 109 HGAINLGQGFP----NFDGPDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKK------DSGLEVDPEKEVTVTS 177 (434)
Q Consensus 109 ~~~i~l~~g~p----~~~~~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~------~~g~~~~~~~~i~~t~ 177 (434)
.+.|+|+.|.| ++++++.+.+++.+++.+. ...|++..|..+||+++++++++ ..|..++++ +|++|+
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~-~v~~~~ 111 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKD-NVVLCS 111 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGG-GEEEES
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcc-eEEEeC
Confidence 36899999986 5778899999999988764 36798888999999999999983 356667787 899999
Q ss_pred ChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcc
Q 013883 178 GCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTG 256 (434)
Q Consensus 178 G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG 256 (434)
|+++++.+++.+++++||+|++++|+|+++...++..|++++.++++++ ++.+|++.++++++++++++++++|+||||
T Consensus 112 g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG 191 (416)
T 1bw0_A 112 GGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCG 191 (416)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCC
Confidence 9999999999999999999999999999999999999999999998753 477899999999988899999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-----CccccCCCCCCCceEEEccCChhhccccceeeeEEeChh
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-----HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH 331 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-----~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~ 331 (434)
.+++.+++++|+++|++||++||+||+|.++.+++. ..++..+.. .++++++.||||.++++|+|+||++++++
T Consensus 192 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~Glr~G~~~~~~~ 270 (416)
T 1bw0_A 192 SNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFET-TVPRVILGGTAKNLVVPGWRLGWLLYVDP 270 (416)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCC-SCCEEEEEESTTTTSCGGGCCEEEEEECT
T ss_pred cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccC-CCcEEEEecchhhCCCCCceEEEEEeeCc
Confidence 999999999999999999999999999999988764 234444432 34689999999999999999999998763
Q ss_pred --hHHHHH----HHhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeee
Q 013883 332 --LTWGVR----QAHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVD 403 (434)
Q Consensus 332 --~~~~l~----~~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 403 (434)
+++.+. ... ..+++.+.+.|.++..+|+. .++++++.+++++++++.+.+.|+++ |+.+..+++++|+|+.
T Consensus 271 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 349 (416)
T 1bw0_A 271 HGNGPSFLEGLKRVG-MLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSR 349 (416)
T ss_dssp TCSCHHHHHHHHHHH-HHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEE
T ss_pred hhhHHHHHHHHHHHh-ccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEe
Confidence 444433 221 13578889999999999986 36788999999999999999999987 8888878888888887
Q ss_pred cCCC---CCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 404 HTPF---GHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 404 ~~~~---~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+... +..+..+++++|++++||.+.||+.|+
T Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~ 383 (416)
T 1bw0_A 350 IDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFH 383 (416)
T ss_dssp ECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGT
T ss_pred CCHHHcCCCCCHHHHHHHHHHHCCEEEecccccC
Confidence 6421 112577888888777799999998763
No 51
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.7e-42 Score=344.69 Aligned_cols=315 Identities=21% Similarity=0.339 Sum_probs=268.8
Q ss_pred hhcCCeeEeCCCCCCCC--CcHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 106 AIKHGAINLGQGFPNFD--GPDFVKDAAIQAIRDG---KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 106 ~~~~~~i~l~~g~p~~~--~~~~v~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
..+++.|||+.|.|+.. +++.+.+++.+++.+. ...|.+..|..+||++++++++ ++++ +|++++|++
T Consensus 29 ~~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g------~~~~-~v~~~~g~~ 101 (397)
T 2zyj_A 29 TQRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIG------VRPE-EVLITTGSQ 101 (397)
T ss_dssp HTSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHT------SCGG-GEEEESHHH
T ss_pred ccCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhC------CChh-hEEEeccHH
Confidence 33457899999987654 5778888888887652 3678888899999999999994 5566 899999999
Q ss_pred HHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEE-EecCCCCCcccC
Q 013883 181 EAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAI-LMNTPHNPTGKM 258 (434)
Q Consensus 181 ~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i-~~~~p~NPTG~~ 258 (434)
+++.+++.+++++||+|++++|+|+++...++..|++++.+|.++ + ++|++.+++++++ ++++| ++++||||||.+
T Consensus 102 ~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~ 179 (397)
T 2zyj_A 102 QALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGE-E-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGL 179 (397)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEET-T-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCB
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCC-C-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCc
Confidence 999999999999999999999999999999999999999999875 2 4899999999986 78887 578999999999
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCC--CCceEEEccCChhhccccceeeeEEeChhhHHH
Q 013883 259 FTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGM--YERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG 335 (434)
Q Consensus 259 ~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~ 335 (434)
++.+++++|+++|++||+++|+||+|.++.+++. ..++..+... .++++++.|+||.+| +|+|+||+++++++++.
T Consensus 180 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~ 258 (397)
T 2zyj_A 180 TPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQK 258 (397)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHHHHHH
Confidence 9999999999999999999999999999988654 2344443211 167899999999999 99999999999999998
Q ss_pred HHHHhhccccCCchHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHhhhC---CCEeecCCeeEEEeeecCCCCCCC
Q 013883 336 VRQAHSFLTFATSTPMQWAATAALRAPE-TYYEELKRDYSAKKAILVEGLNAV---GFKVFPSSGTYFVVVDHTPFGHET 411 (434)
Q Consensus 336 l~~~~~~~~~~~~~~~q~a~~~~L~~~~-~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~~~~~~ 411 (434)
++.......++.+.+.|.++..+|++.. +++++++++++++++.+.+.|++. |+.+..+++++|+|+++.. +. +
T Consensus 259 l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~-~~-~ 336 (397)
T 2zyj_A 259 LVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPK-GL-S 336 (397)
T ss_dssp HHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECST-TC-C
T ss_pred HHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCC-CC-C
Confidence 8877766667789999999999998754 678888999999999999999874 7888888889999998753 22 5
Q ss_pred HHHHHHHHHHhcCeEEECCCCC
Q 013883 412 DIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
..+++++|+++ ||.+.||..|
T Consensus 337 ~~~~~~~l~~~-gi~v~~g~~f 357 (397)
T 2zyj_A 337 AEGLFRRALEE-NVAFVPGGPF 357 (397)
T ss_dssp HHHHHHHHHHT-TEEEEESGGG
T ss_pred HHHHHHHHHHC-CCEEechHHh
Confidence 77899998876 9999999876
No 52
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=7.5e-43 Score=350.28 Aligned_cols=328 Identities=16% Similarity=0.178 Sum_probs=260.5
Q ss_pred hhhccccHHHHHHHHhhcCCeeEeCCCCCC---CCCcHHHHHHHHHHH--Hc--CCCCCCCCCCcHHHHHHHHHHHHhhc
Q 013883 91 LEKFKTTIFTQMSMLAIKHGAINLGQGFPN---FDGPDFVKDAAIQAI--RD--GKNQYARGHGVPEFNSAIASRFKKDS 163 (434)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~---~~~~~~v~~~~~~~~--~~--~~~~Y~~~~G~~~lr~~ia~~l~~~~ 163 (434)
+...+..++..+.++....+.|||+.|.|+ ++.++.+.+++.+.+ .. ....|++..|.++||++++++++
T Consensus 14 l~~~~~~~~~~~~~l~~~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~--- 90 (422)
T 3d6k_A 14 LAQVREEVTAKYAELKAKNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALG--- 90 (422)
T ss_dssp ----CHHHHHHHHHHHHTTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHT---
T ss_pred HHhhHHHHHHHHHHHhccCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhC---
Confidence 333444445555555444468999999998 777777777665542 12 24689999999999999999995
Q ss_pred CCCCCCCCcEEEcCChHHHH--HHHHHHccCC------------CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCC
Q 013883 164 GLEVDPEKEVTVTSGCTEAI--AATILGLINP------------GDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFA 229 (434)
Q Consensus 164 g~~~~~~~~i~~t~G~~~ai--~~~~~~l~~~------------gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~ 229 (434)
++++ +|++|+|+++++ .+++..+.++ +|+|++++|+|..+...++..|++++.+|++++ +
T Consensus 91 ---~~~~-~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~--g 164 (422)
T 3d6k_A 91 ---LPAD-LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE--G 164 (422)
T ss_dssp ---CCGG-GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT--E
T ss_pred ---CChh-HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC--C
Confidence 6777 899999999987 6777777665 357999999999999999999999999999753 4
Q ss_pred CCHHHHHhhccc-CCcEEE-ecCCCCCcccCCCHHHHHHHHHHHH-HcCcEEEEcCcCCc--cccCCC-CccccCC---C
Q 013883 230 IPIEELKSTISK-NTRAIL-MNTPHNPTGKMFTREELNVIASLCI-ENDVLVFSDEVYDK--LAFEMD-HISIASL---P 300 (434)
Q Consensus 230 ~d~~~l~~~i~~-~~~~i~-~~~p~NPTG~~~~~e~l~~i~~la~-~~~~~iI~Deay~~--~~~~~~-~~~~~~~---~ 300 (434)
+|++.+++++++ ++++|+ +++||||||.+++.+++++|+++|+ +||++||+||+|.. |.+++. ..++..+ .
T Consensus 165 ~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
T 3d6k_A 165 PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAA 244 (422)
T ss_dssp ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT
T ss_pred CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhcc
Confidence 899999999986 788887 6899999999999999999999999 99999999999986 433321 2233221 2
Q ss_pred CCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhC-C--hHHHHHHHHHHHHHH
Q 013883 301 GMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRA-P--ETYYEELKRDYSAKK 377 (434)
Q Consensus 301 ~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~-~--~~~~~~~~~~~~~~~ 377 (434)
+..++++++.||||. +++|+|+||+++++++++.+...+....++.+.+.|.++..+|++ . +++++++++.+++++
T Consensus 245 ~~~~~~i~~~S~SK~-~~~GlriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 323 (422)
T 3d6k_A 245 GNPNRFWFMSSTSKI-THAGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKF 323 (422)
T ss_dssp TCTTCEEEEEESTTT-SCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEcChhhh-cCcccceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 346789999999999 679999999999999999998888777788999999999999987 2 367888899999999
Q ss_pred HHHHHHhhh----CC-CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 378 AILVEGLNA----VG-FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 378 ~~l~~~L~~----~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+.+.+.|++ .| +.+..+++++|+|+++... +..++.+. ++++||.+.||..
T Consensus 324 ~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~---~~~~~~~~-l~~~gV~v~~~g~ 379 (422)
T 3d6k_A 324 ERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG---TASRVVEL-AKEAGIALTGAGS 379 (422)
T ss_dssp HHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT---CHHHHHHH-HHHTTEECCCTTT
T ss_pred HHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC---CHHHHHHH-HHHCCeEEEcCcc
Confidence 988888865 34 6777888999999998532 35556554 4667999999543
No 53
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=1.9e-41 Score=332.74 Aligned_cols=304 Identities=18% Similarity=0.278 Sum_probs=264.5
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
.+.|||+.|.+.+++++.+.+++.+.+. ....|+ ..+..++|++++++++ ++++ +|++++|+++++..++.
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~y~-~~~~~~lr~~la~~~~------~~~~-~v~~~~g~t~a~~~~~~ 102 (363)
T 3ffh_A 32 TKITKLSSNENPLGTSKKVAAIQANSSV-ETEIYP-DGWASSLRKEVADFYQ------LEEE-ELIFTAGVDELIELLTR 102 (363)
T ss_dssp SCCEECSSCSCTTCCCHHHHHHHHTCBS-CCCBC-----CHHHHHHHHHHHT------CCGG-GEEEESSHHHHHHHHHH
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHH-HhhcCC-CcchHHHHHHHHHHhC------CChh-hEEEeCCHHHHHHHHHH
Confidence 3789999999999999999988877654 345564 4578999999999986 5667 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+++++||+|++++|+|..+...++..|++++.+++++ ++.+|++.+++++++++++|++++||||||.+++.+++++|+
T Consensus 103 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~ 181 (363)
T 3ffh_A 103 VLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ-DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFL 181 (363)
T ss_dssp HHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT-TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred HHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC-CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHH
Confidence 9999999999999999999999999999999999986 789999999999999999999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
+.|++ |+++|+||+|.++.+ +............++++++.||||.+|++|+|+||+++++++++.++.... +++.+
T Consensus 182 ~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~--~~~~~ 257 (363)
T 3ffh_A 182 DRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRP--PFNTT 257 (363)
T ss_dssp TTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTCC--SCCCB
T ss_pred HhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhCC--CCCCC
Confidence 88887 999999999999887 544444444445789999999999999999999999999999998887654 67899
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh-CCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA-VGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v 427 (434)
.+.+.++..+|++ .+++++.+++++++++.+.+.|++ .|+.+.+++++ |+|+++.. +..++.++|.+ +||.+
T Consensus 258 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~-~~~~~~~~----~~~~~~~~l~~-~gi~v 330 (363)
T 3ffh_A 258 SIGQKLAIEAIKD-QAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGN-FVLIDLGI----EAGTIFSYLEK-NGYIT 330 (363)
T ss_dssp HHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCSS-EEEEECSS----CHHHHHHHHHH-TTEEC
T ss_pred HHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCCCe-EEEEECCC----CHHHHHHHHHH-CCeEE
Confidence 9999999999986 578899999999999999999999 79998877665 57887743 57789888876 59999
Q ss_pred ECCCCC
Q 013883 428 IPTSVF 433 (434)
Q Consensus 428 ~pG~~F 433 (434)
.||+.|
T Consensus 331 ~~g~~~ 336 (363)
T 3ffh_A 331 RSGAAL 336 (363)
T ss_dssp EETTTT
T ss_pred EeCccC
Confidence 999876
No 54
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.5e-42 Score=337.51 Aligned_cols=306 Identities=19% Similarity=0.281 Sum_probs=265.9
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
++.|+|+.|.+.+++++.+.+++.+++.. ...|++..+ .+||++++++++ ++++ +|++|+|+++++.+++.
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~y~~~~~-~~lr~~la~~~~------~~~~-~v~~~~g~~~a~~~~~~ 100 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANK-AHLYPDDSM-IELKSTLAQKYK------VQNE-NIIIGAGSDQVIEFAIH 100 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGG-TTSCCCTTC-HHHHHHHHHHHT------CCGG-GEEEESSHHHHHHHHHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh-hccCCCCCh-HHHHHHHHHHhC------CCcc-eEEECCCHHHHHHHHHH
Confidence 37899999999899999999999988763 567888777 899999999985 5677 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+++++||+|++++|+|..+...++..|++++.++++++++ +|++.+++++++++++|++++||||||.+++.+++++|+
T Consensus 101 ~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~ 179 (365)
T 3get_A 101 SKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFI 179 (365)
T ss_dssp HHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred HHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHH
Confidence 9999999999999999999999999999999999833467 999999999999999999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCcccc--CC-CCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcccc
Q 013883 269 SLCIENDVLVFSDEVYDKLAF--EM-DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTF 345 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~--~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~ 345 (434)
++| ++|+++|+||+|.++.+ .+ ...+........++++++.||||.+|++|+|+||+++++++++.++.... .+
T Consensus 180 ~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~--~~ 256 (365)
T 3get_A 180 KGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRA--PF 256 (365)
T ss_dssp HTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSC--TT
T ss_pred HhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhcC--CC
Confidence 998 57999999999999885 32 33333333233578899999999999999999999999999998887654 46
Q ss_pred CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCe
Q 013883 346 ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGV 425 (434)
Q Consensus 346 ~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV 425 (434)
+.+.+.+.++..+|++ .+++++.+++++++++.+.+.|++.|+.+.++.+++ +|+++... +..++.++|.+ +||
T Consensus 257 ~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-~~~~~~~~---~~~~~~~~l~~-~gi 330 (365)
T 3get_A 257 NVSNLALKAAVAAMDD-DEFTEKTLENNFSQMELYKEFAKKHNIKIIDSYTNF-ITYFFDEK---NSTDLSEKLLK-KGI 330 (365)
T ss_dssp CSCHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCSSSE-EEEECSSS---CHHHHHHHHHT-TTE
T ss_pred CcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCEECCCCCeE-EEEECCCC---CHHHHHHHHHH-CCE
Confidence 7899999999999996 578899999999999999999999999988777765 78887532 57788888876 599
Q ss_pred EEECCCCC
Q 013883 426 VAIPTSVF 433 (434)
Q Consensus 426 ~v~pG~~F 433 (434)
.+.||+.|
T Consensus 331 ~v~~g~~~ 338 (365)
T 3get_A 331 IIRNLKSY 338 (365)
T ss_dssp ECEECGGG
T ss_pred EEEECccC
Confidence 99999866
No 55
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=7.1e-42 Score=340.68 Aligned_cols=312 Identities=23% Similarity=0.391 Sum_probs=256.8
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHc-----CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRD-----GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+++.|+|+.|.+++++++.+.+++.+++.+ ....|.+..|..+||+++++++. +|. ++++ +|++++|++++
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~-~~~~-~v~~~~G~~~a 107 (400)
T 3asa_A 32 QHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGF-VDAK-EIFISDGAKVD 107 (400)
T ss_dssp TSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTS-SCGG-GEEEESCHHHH
T ss_pred CCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCC-CCHH-HEEEccChHHH
Confidence 457899999999888899999999888764 24579888899999999999975 454 5677 89999999999
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCE-EEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCC
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAK-IKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFT 260 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~-~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~ 260 (434)
+.+++ .++++||+|++++|+|+++...+...|.+ ++.+|.+++ ++..|++. + +++++|++++||||||.+++
T Consensus 108 l~~~~-~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~----~-~~~~~v~l~~p~nptG~~~~ 181 (400)
T 3asa_A 108 LFRLL-SFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE----D-THIDILCLCSPNNPTGTVLN 181 (400)
T ss_dssp HHHHH-HHHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT----T-CCCSEEEEESSCTTTCCCCC
T ss_pred HHHHH-HHcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh----c-cCccEEEEeCCCCCCCCcCC
Confidence 99865 45689999999999999999999999998 999998742 34444432 1 57899999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhh-------
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL------- 332 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~------- 332 (434)
.+++++|+++|+++|+++|+||+|.++.+++. ...+..+....++++++.||||.+|++|+|+||+++++++
T Consensus 182 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~ 261 (400)
T 3asa_A 182 KDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHF 261 (400)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCB
T ss_pred HHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhh
Confidence 99999999999999999999999999887653 2344444333467899999999999999999999999888
Q ss_pred HHHHHHHhhcccc-CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeee-cCCCCCC
Q 013883 333 TWGVRQAHSFLTF-ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVD-HTPFGHE 410 (434)
Q Consensus 333 ~~~l~~~~~~~~~-~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~-~~~~~~~ 410 (434)
+..+........+ +.+.+.|.++..+|++. ++++++++++++++.+.+.|++.|+.+.++.+++|+|++ ++. +.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~- 337 (400)
T 3asa_A 262 VIQDWERFLSTTFNGASIPAQEAGVAGLSIL--PQLEAIHYYRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQA-NI- 337 (400)
T ss_dssp HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT--TTCHHHHHHHHHHHHHHHHHHHTTCEEEECSSSSEEEEECCCT-TC-
T ss_pred HHHHHHHHhccCccCCChHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCceEEEEeccCC-CC-
Confidence 6666433332334 68899999999999864 677888999999999999999999998888788889998 632 22
Q ss_pred CHHHHHHHHHHhcCeEEECCCCC
Q 013883 411 TDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 411 ~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
++.+++++|++++||.+.||+.|
T Consensus 338 ~~~~~~~~l~~~~gv~v~~g~~f 360 (400)
T 3asa_A 338 SDRDLFDFFLREYHIAITPGIGF 360 (400)
T ss_dssp CTTTHHHHHHHHHSEECEEGGGG
T ss_pred CHHHHHHHHHHhCCEEEeChhHh
Confidence 34578888888789999999876
No 56
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=8.5e-43 Score=350.30 Aligned_cols=323 Identities=16% Similarity=0.149 Sum_probs=265.8
Q ss_pred cHHHHHHHHhhcCCeeEeCCCCCCCCCc---HHHHHHH--HHHHHc---CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC
Q 013883 97 TIFTQMSMLAIKHGAINLGQGFPNFDGP---DFVKDAA--IQAIRD---GKNQYARGHGVPEFNSAIASRFKKDSGLEVD 168 (434)
Q Consensus 97 ~~~~~~~~~~~~~~~i~l~~g~p~~~~~---~~v~~~~--~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~ 168 (434)
....++.++...++.|||+.|.|+.... +.+.+++ .+++.+ ....|++..|.++||+++++++. ++
T Consensus 21 ~~~~~~~~~~~~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~------~~ 94 (427)
T 3ppl_A 21 DIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLG------VP 94 (427)
T ss_dssp HHHHHHHHHHHTCCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHT------SC
T ss_pred HHHHHHHHhhcCCceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhC------CC
Confidence 3455566666777899999999885432 2355554 444433 24689999999999999999995 67
Q ss_pred CCCcEEEcCChHHHH--HHHHHHccC--C----------CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHH
Q 013883 169 PEKEVTVTSGCTEAI--AATILGLIN--P----------GDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEE 234 (434)
Q Consensus 169 ~~~~i~~t~G~~~ai--~~~~~~l~~--~----------gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~ 234 (434)
++ +|++|+|+++++ .+++.++++ | ||+|++++|+|..+...++..|++++.+|++++ ++|++.
T Consensus 95 ~~-~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~--g~d~~~ 171 (427)
T 3ppl_A 95 VE-QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED--GPDMDA 171 (427)
T ss_dssp GG-GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT--EECHHH
T ss_pred cc-eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC--CCCHHH
Confidence 77 899999999999 578888877 6 899999999999999999999999999999853 499999
Q ss_pred HHhhcc-cCCcEEEec-CCCCCcccCCCHHHHHHHHHHH-HHcCcEEEEcCcCCccccCCCCc---cccCC---CCCCCc
Q 013883 235 LKSTIS-KNTRAILMN-TPHNPTGKMFTREELNVIASLC-IENDVLVFSDEVYDKLAFEMDHI---SIASL---PGMYER 305 (434)
Q Consensus 235 l~~~i~-~~~~~i~~~-~p~NPTG~~~~~e~l~~i~~la-~~~~~~iI~Deay~~~~~~~~~~---~~~~~---~~~~~~ 305 (434)
++++++ +++++|+++ +||||||.+++.+++++|+++| ++||++||+||+|.++.|++... .+..+ .+..++
T Consensus 172 l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (427)
T 3ppl_A 172 VEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNR 251 (427)
T ss_dssp HHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTS
T ss_pred HHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCc
Confidence 999995 578888765 8899999999999999999999 99999999999999988876432 22222 134678
Q ss_pred eEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHH
Q 013883 306 TVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP---ETYYEELKRDYSAKKAILVE 382 (434)
Q Consensus 306 ~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~---~~~~~~~~~~~~~~~~~l~~ 382 (434)
+++++||||. +++|+|+||+++++++++.+........++.+.+.|.++..+|++. +++++++++.++++++.+.+
T Consensus 252 ~i~~~S~SK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 330 (427)
T 3ppl_A 252 FWAFTSTSKI-TLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLE 330 (427)
T ss_dssp EEEEEESTTT-SCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEechhhc-cCcCccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 6699999999999999999998888788899999999999999972 46778888999999998888
Q ss_pred Hhhh----C-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 383 GLNA----V-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 383 ~L~~----~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
.|.+ . ++.+..+++++|+|+++... +..++.+.| +++||.++||..|
T Consensus 331 ~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~---~~~~~~~~l-~~~gv~v~~~g~~ 382 (427)
T 3ppl_A 331 ILDSRLAEYGVAQWTVPAGGYFISLDVVPG---TASRVAELA-KEAGIALTGAGSS 382 (427)
T ss_dssp HHHHHHGGGTCCEECCCSBSSCEEEECSTT---CHHHHHHHH-HHTTEECCCTTTT
T ss_pred HHHHhcCCCCceEEeCCCccEEEEEECCcc---hHHHHHHHH-HHCCCEEecCcCc
Confidence 8765 2 57888889999999998542 466777766 4569999995444
No 57
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=7.2e-43 Score=346.81 Aligned_cols=314 Identities=18% Similarity=0.225 Sum_probs=256.0
Q ss_pred CCeeEeCCCC---CCC--CCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE--cCChH
Q 013883 109 HGAINLGQGF---PNF--DGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV--TSGCT 180 (434)
Q Consensus 109 ~~~i~l~~g~---p~~--~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~--t~G~~ 180 (434)
++.|||+.|. ++. ++++.+.+++.+.+.+ ..+.|.+..|..+||+++++++.+..+..++++ +|++ |+|++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-~v~~~~~~g~~ 104 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDK-RARTAQTPGGT 104 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-CEEEEEESHHH
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccc-cEEEEecccch
Confidence 3689999996 332 4568899998887765 356798889999999999999975544334567 7988 99999
Q ss_pred HHHHHHHHHc--cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhccc---CCcEEEecCCCCC
Q 013883 181 EAIAATILGL--INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISK---NTRAILMNTPHNP 254 (434)
Q Consensus 181 ~ai~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~---~~~~i~~~~p~NP 254 (434)
+++.+++..+ +++||+|++++|+|+++...++..|++++.+|+++ +++.+|++.+++++++ +++++++++||||
T Consensus 105 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~np 184 (396)
T 2q7w_A 105 GALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNP 184 (396)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred hhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 9999998766 46999999999999999999999999999999853 3688999999999875 3677888999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC--CCccccCCCCCCCceEEEccCChhhccccceeeeEEe---C
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM--DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA---P 329 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~--~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~---~ 329 (434)
||.+++.+++++|+++|++||+++|+||+|.++.+++ ...++..+...+++++++.||||.+|++|+|+||+++ +
T Consensus 185 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~ 264 (396)
T 2q7w_A 185 TGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAAD 264 (396)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCC
Confidence 9999999999999999999999999999999998764 3334443433357899999999999999999999997 4
Q ss_pred h----hhHHHHHHHhhccccCCchHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHhhhCC----CEeecCC
Q 013883 330 P----HLTWGVRQAHSFLTFATSTPMQWAATAALRAP------ETYYEELKRDYSAKKAILVEGLNAVG----FKVFPSS 395 (434)
Q Consensus 330 ~----~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~------~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~ 395 (434)
+ ++++.+....+....+++.+.|.++..+|++. ++++++++++++++++.+.+.|++.| +.+.+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 344 (396)
T 2q7w_A 265 SETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQ 344 (396)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHC
T ss_pred HHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCC
Confidence 5 45555555444444556889999999999875 36788889999999999999999986 7777889
Q ss_pred eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 396 GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+++|+|+++. . +++.++++++||.+.||
T Consensus 345 ~~~~~~~~~~------~-~~~~~~l~~~gv~v~~~ 372 (396)
T 2q7w_A 345 NGMFSFSGLT------K-EQVLRLREEFGVYAVAS 372 (396)
T ss_dssp CSSEEECCCC------H-HHHHHHHHHHCEECCTT
T ss_pred CceEEEecCC------H-HHHHHHHHhcCeeecCC
Confidence 9999998752 3 45666667789999986
No 58
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=1.8e-42 Score=345.99 Aligned_cols=314 Identities=18% Similarity=0.184 Sum_probs=261.1
Q ss_pred CCeeEeCCCCC-C----CCCcHHHHHHHHHHHHc--CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE--cCCh
Q 013883 109 HGAINLGQGFP-N----FDGPDFVKDAAIQAIRD--GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV--TSGC 179 (434)
Q Consensus 109 ~~~i~l~~g~p-~----~~~~~~v~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~--t~G~ 179 (434)
++.|||+.|.| + ..+++.+.+++.+.+.+ ..+.|.+..|..+||+++++++.+.+|..++++ +|++ |+|+
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-~v~~~~t~gg 108 (412)
T 1ajs_A 30 PRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEK-RVGGVQSLGG 108 (412)
T ss_dssp TTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-CEEEEEEEHH
T ss_pred CCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCC-cEEEEECCCc
Confidence 47899999975 3 24568899988887732 346798889999999999999976666656777 8999 9999
Q ss_pred HHHHHHHHH--HccCCC-----CeEEEcCCCchhHHHHHHHcCCE-EEEEEcCC-CCCCCCHHHHHhhccc---CCcEEE
Q 013883 180 TEAIAATIL--GLINPG-----DEVILFAPFYDSYEATLSMAGAK-IKCITLRP-PDFAIPIEELKSTISK---NTRAIL 247 (434)
Q Consensus 180 ~~ai~~~~~--~l~~~g-----d~Vlv~~p~y~~~~~~~~~~G~~-~~~v~~~~-~~~~~d~~~l~~~i~~---~~~~i~ 247 (434)
++++.+++. .++++| |+|++++|+|+++...++..|++ ++.+++++ +++.+|++.+++++++ ++++++
T Consensus 109 ~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~ 188 (412)
T 1ajs_A 109 TGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVL 188 (412)
T ss_dssp HHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEE
Confidence 999999854 456899 99999999999999999999999 99999853 4688999999999875 667888
Q ss_pred ecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC---CCccccCCCCCCCceEEEccCChhhccccceee
Q 013883 248 MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM---DHISIASLPGMYERTVTMNSLGKTFSLTGWKIG 324 (434)
Q Consensus 248 ~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~---~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G 324 (434)
+++||||||.+++.+++++|+++|++||+++|+||+|.++.+++ ...++..+....++++++.||||.+|++|+|+|
T Consensus 189 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG 268 (412)
T 1ajs_A 189 HACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVG 268 (412)
T ss_dssp ESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEE
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceE
Confidence 89999999999999999999999999999999999999998865 333444443346789999999999998899999
Q ss_pred eEEe---Chh----hHHHHHHHhhccccCCchHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHhhhCC---
Q 013883 325 WAIA---PPH----LTWGVRQAHSFLTFATSTPMQWAATAALRAP------ETYYEELKRDYSAKKAILVEGLNAVG--- 388 (434)
Q Consensus 325 ~~~~---~~~----~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~------~~~~~~~~~~~~~~~~~l~~~L~~~g--- 388 (434)
|+++ +++ +++.+.........+++.+.|.++..+|++. ++++++++++++++++.+.+.|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 348 (412)
T 1ajs_A 269 NLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPG 348 (412)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred EEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 9999 777 4444555444444456899999999999975 35788899999999999999999886
Q ss_pred -CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 389 -FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 389 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+.+..+++++|+|+++. .+++.++++++||.+.||
T Consensus 349 ~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~gv~v~~~ 384 (412)
T 1ajs_A 349 TWNHITDQIGMFSFTGLN-------PKQVEYLINQKHIYLLPS 384 (412)
T ss_dssp CCHHHHHCCSSEEECCCC-------HHHHHHHHHTTCEECCTT
T ss_pred CeeEEcCCCceEEEeCCC-------HHHHHHHHHhCCEEecCC
Confidence 77778889999998652 356677777889999886
No 59
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=7.4e-43 Score=350.12 Aligned_cols=330 Identities=18% Similarity=0.218 Sum_probs=272.3
Q ss_pred HhhhccccHHHHHHHHhhcCCeeEeCCCCCC---CCCcHHHHHHHH--HHHHcC--CCCC-CCCCCcHHHHHHHHHHHHh
Q 013883 90 RLEKFKTTIFTQMSMLAIKHGAINLGQGFPN---FDGPDFVKDAAI--QAIRDG--KNQY-ARGHGVPEFNSAIASRFKK 161 (434)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~---~~~~~~v~~~~~--~~~~~~--~~~Y-~~~~G~~~lr~~ia~~l~~ 161 (434)
+++.++...+.++.++....+.|||+.|.|+ ++.++.+.+++. +++.++ ...| .+..|.++||++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~- 84 (423)
T 3ez1_A 6 ASRPALDLARQAYEAFKARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLD- 84 (423)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHHHhhcCCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhC-
Confidence 4555666778888888888899999999999 677777777764 444332 3789 888999999999999985
Q ss_pred hcCCCCCCCCcEEEcCChHHHHH--HHHHHccC--C---------CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCC
Q 013883 162 DSGLEVDPEKEVTVTSGCTEAIA--ATILGLIN--P---------GDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDF 228 (434)
Q Consensus 162 ~~g~~~~~~~~i~~t~G~~~ai~--~~~~~l~~--~---------gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~ 228 (434)
++++ +|++|+|+++++. +++.++++ + ||+|++++|+|..+...++..|++++.+|++++
T Consensus 85 -----~~~~-~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-- 156 (423)
T 3ez1_A 85 -----VKAE-NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD-- 156 (423)
T ss_dssp -----SCGG-GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT--
T ss_pred -----CChh-hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC--
Confidence 6677 8999999999998 88888887 8 599999999999999999999999999999853
Q ss_pred CCCHHHHHhhc--ccCCcEEEe-cCCCCCcccCCCHHHHHHHHHHH-HHcCcEEEEcCcCCccccCC-CCc---cccCC-
Q 013883 229 AIPIEELKSTI--SKNTRAILM-NTPHNPTGKMFTREELNVIASLC-IENDVLVFSDEVYDKLAFEM-DHI---SIASL- 299 (434)
Q Consensus 229 ~~d~~~l~~~i--~~~~~~i~~-~~p~NPTG~~~~~e~l~~i~~la-~~~~~~iI~Deay~~~~~~~-~~~---~~~~~- 299 (434)
++|++.+++++ .+++++|++ ++||||||.+++.+++++|+++| ++||++||+||+|..+.+.+ ... ++..+
T Consensus 157 g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 236 (423)
T 3ez1_A 157 GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLA 236 (423)
T ss_dssp EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHH
T ss_pred CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhh
Confidence 59999999999 468888865 58999999999999999999999 99999999999999766554 221 22222
Q ss_pred --CCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhC--C--hHHHHHHHHHH
Q 013883 300 --PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRA--P--ETYYEELKRDY 373 (434)
Q Consensus 300 --~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~--~--~~~~~~~~~~~ 373 (434)
.+..++++++.||||. +++|+|+||+++++++++.++..+....++.+.+.|.++..+|++ . .+++++.++.+
T Consensus 237 ~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 315 (423)
T 3ez1_A 237 RDAGYPDRAFVFASTSKI-TFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAII 315 (423)
T ss_dssp HHHTCTTSEEEEEESTTT-SCSSSSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHH
T ss_pred hccCCCCeEEEEeCchhh-ccCCcceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 1246789999999998 569999999999999999999888888899999999999999987 3 36777788888
Q ss_pred HHHHHHHHHHhhh----CC--CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC-CCCC
Q 013883 374 SAKKAILVEGLNA----VG--FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP-TSVF 433 (434)
Q Consensus 374 ~~~~~~l~~~L~~----~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p-G~~F 433 (434)
+++++.+.+.|.+ .| +.+..+++++|+|+++... +..++.+.| +++||.+.| |+.|
T Consensus 316 ~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~---~~~~~~~~l-~~~gv~v~~~g~~~ 378 (423)
T 3ez1_A 316 APKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP---VADRVVKLA-EAAGVSLTPAGATY 378 (423)
T ss_dssp HHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS---CHHHHHHHH-HHTTEECCCTTTTS
T ss_pred HHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC---cHHHHHHHH-HHCCcEEecCcccc
Confidence 8888877777654 55 7777889999999998542 455666655 566999999 5544
No 60
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=7.4e-42 Score=341.83 Aligned_cols=319 Identities=20% Similarity=0.275 Sum_probs=252.6
Q ss_pred cCCeeEeCCCCCCCCCc--HHHHHHHHHHHHcCC-----CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 108 KHGAINLGQGFPNFDGP--DFVKDAAIQAIRDGK-----NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~--~~v~~~~~~~~~~~~-----~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
++++|||+.|.|+..++ +.+.+++.+.+.+.. ..|.+..|.++||+++++++.+.+|..++++ +|++|+|++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~t 108 (417)
T 3g7q_A 30 TPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQ-NIALTNGSQ 108 (417)
T ss_dssp --CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGG-GEEEESCHH
T ss_pred CCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcc-cEEEeCCcH
Confidence 35899999999987443 456666766665432 4799999999999999999999999999998 899999999
Q ss_pred HHHHHHHHHccCCCC-----eEEEc-CCCchhHHHHHHHc------CCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEe
Q 013883 181 EAIAATILGLINPGD-----EVILF-APFYDSYEATLSMA------GAKIKCITLRPPDFAIPIEELKSTISKNTRAILM 248 (434)
Q Consensus 181 ~ai~~~~~~l~~~gd-----~Vlv~-~p~y~~~~~~~~~~------G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~ 248 (434)
+++.+++++++++|| +|+++ +|+|+++...+... +..+..++.+..++.+|++.++ +++++++|++
T Consensus 109 ~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~v~~ 186 (417)
T 3g7q_A 109 SAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IGEETGMICV 186 (417)
T ss_dssp HHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CCTTEEEEEE
T ss_pred HHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cccCceEEEE
Confidence 999999999999987 89997 99999998765432 3344444433224678999988 7778999999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEe
Q 013883 249 NTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 328 (434)
Q Consensus 249 ~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~ 328 (434)
++||||||.+++.+++++|+++|++||+++|+||+|..+..+...... .....++++++.|||| ++++|+|+||+++
T Consensus 187 ~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~--~~~~~~~~i~~~s~sK-~~~~G~r~G~~~~ 263 (417)
T 3g7q_A 187 SRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEA--RPLWNPNIILCMSLSK-LGLPGSRCGIIIA 263 (417)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCC--CCCCCTTEEEEEESGG-GTCTTSCCEEEEC
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccccccc--ccCCCCCEEEEEechh-ccCCCcceEEEEe
Confidence 999999999999999999999999999999999999864321111111 1223578999999999 6889999999999
Q ss_pred ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCCh--HHHHH-HHHHHHHHHHHHHHHhhh----CCCEeecCCeeEEEe
Q 013883 329 PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPE--TYYEE-LKRDYSAKKAILVEGLNA----VGFKVFPSSGTYFVV 401 (434)
Q Consensus 329 ~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~--~~~~~-~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~ 401 (434)
++++++.++..+....++.+.+.|.++..+|++.. ++.++ +++.++++++.+.+.|++ .|+.+..+++++|+|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~ 343 (417)
T 3g7q_A 264 NDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLW 343 (417)
T ss_dssp CHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEE
T ss_pred CHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEE
Confidence 99999999988887888899999999999998753 33333 677888888888888766 268888899999999
Q ss_pred eecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 402 VDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 402 ~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+++...+. +..+++++|. ++||.+.||+.|+
T Consensus 344 ~~~~~~~~-~~~~l~~~l~-~~gi~v~~g~~f~ 374 (417)
T 3g7q_A 344 LWFKDLPI-TTELLYQRLK-ARGVLMVPGHYFF 374 (417)
T ss_dssp EECTTCSS-CHHHHHHHHH-HTTEECEEGGGGC
T ss_pred EEcCCCCC-CHHHHHHHHH-HCCEEEECchhhC
Confidence 98854333 5778888885 5699999998774
No 61
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=7.3e-42 Score=334.45 Aligned_cols=304 Identities=18% Similarity=0.280 Sum_probs=263.9
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+.+.|||+.|.+++++++.+.+++.+++.+ ...|+. .|..+||++++++++ ++++ +|++++|+++++..++
T Consensus 15 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~y~~-~~~~~l~~~la~~~~------~~~~-~i~~~~g~~~a~~~~~ 85 (354)
T 3ly1_A 15 TDNPIRINFNENPLGMSPKAQAAARDAVVK-ANRYAK-NEILMLGNKLAAHHQ------VEAP-SILLTAGSSEGIRAAI 85 (354)
T ss_dssp SSSCEECSSCCCSSCCCHHHHHHHHHTGGG-TTSCCH-HHHHHHHHHHHHHTT------SCGG-GEEEESHHHHHHHHHH
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHHHhh-CcCCCC-CchHHHHHHHHHHhC------CChH-HEEEeCChHHHHHHHH
Confidence 347899999999999999999999888764 566744 477899999999885 5667 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc--cCCcEEEecCCCCCcccCCCHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS--KNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~--~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
.+++++||+|++++|+|.++...++..|++++.++.++ ++.+|++.++++++ +++++|++++||||||.+++.++++
T Consensus 86 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 164 (354)
T 3ly1_A 86 EAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD-NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIE 164 (354)
T ss_dssp HHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT-TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHH
Confidence 99999999999999999999999999999999999885 68999999999998 7899999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC-CceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY-ERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT 344 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~-~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~ 344 (434)
+|+++| +||+++|+||+|.++.+++............ ++++++.||||.+|++|+|+||+++++++++.++.....
T Consensus 165 ~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~-- 241 (354)
T 3ly1_A 165 PWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAG-- 241 (354)
T ss_dssp HHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTC--
T ss_pred HHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcCC--
Confidence 999999 8999999999999998876544443332223 789999999999999999999999999999888776653
Q ss_pred cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcC
Q 013883 345 FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVG 424 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~G 424 (434)
++.+.+.+.++..+|++ .+++++.+++++++++.+.+.|++.|+.+.++.+. |+|+++.. +..++.+.|.+ +|
T Consensus 242 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~l~~-~g 314 (354)
T 3ly1_A 242 EKINFSGVDAALASMND-SAFITYSKKSNDVSRQILLKALEDLKLPYLPSEGN-FVFHQLVV----PLKDYQTHMAD-AG 314 (354)
T ss_dssp SCCCHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCCSS-EEEEECSS----CHHHHHHHHHH-TT
T ss_pred CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCCeECCCCce-EEEEECCC----CHHHHHHHHHH-CC
Confidence 78899999999999986 47889999999999999999999889888766655 57888743 57788888875 59
Q ss_pred eEEECCCC
Q 013883 425 VVAIPTSV 432 (434)
Q Consensus 425 V~v~pG~~ 432 (434)
|.+. |..
T Consensus 315 i~v~-g~~ 321 (354)
T 3ly1_A 315 VLIG-RAF 321 (354)
T ss_dssp EECC-CCC
T ss_pred EEEe-ecC
Confidence 9998 654
No 62
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=3.1e-42 Score=344.45 Aligned_cols=313 Identities=16% Similarity=0.127 Sum_probs=257.9
Q ss_pred CCeeEeCCCCC-CC----CCcHHHHHHHHH-HHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE--cCCh
Q 013883 109 HGAINLGQGFP-NF----DGPDFVKDAAIQ-AIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV--TSGC 179 (434)
Q Consensus 109 ~~~i~l~~g~p-~~----~~~~~v~~~~~~-~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~--t~G~ 179 (434)
++.|||+.|.| +. ++++.+.+++.+ .+... .+.|.+..|..+||+++++++.+.+|..++++ +|++ |+|+
T Consensus 29 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~t~g~ 107 (412)
T 1yaa_A 29 ATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQED-RVISVQSLSG 107 (412)
T ss_dssp SSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-CEEEEEEEHH
T ss_pred CCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcc-eEEEEeccch
Confidence 37899999975 44 456888888888 76543 45798888999999999999986677666777 8999 9999
Q ss_pred HHHHHHHH--HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEc-CCCCCCCCHHHHHhhcccC---CcEEEecCCCC
Q 013883 180 TEAIAATI--LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITL-RPPDFAIPIEELKSTISKN---TRAILMNTPHN 253 (434)
Q Consensus 180 ~~ai~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i~~~---~~~i~~~~p~N 253 (434)
++++.+++ ..++++||+|++++|+|+++...++..|++++.+++ +++++++|++.++++++++ ++++++++|||
T Consensus 108 ~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~n 187 (412)
T 1yaa_A 108 TGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHN 187 (412)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCT
T ss_pred HhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 99999883 444579999999999999999999999999999998 5447889999999998763 34455599999
Q ss_pred CcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC---CCccccCCCCCCC---ceEEEccCChhhccccceeeeEE
Q 013883 254 PTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM---DHISIASLPGMYE---RTVTMNSLGKTFSLTGWKIGWAI 327 (434)
Q Consensus 254 PTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~---~~~~~~~~~~~~~---~~i~i~S~SK~~g~~G~R~G~~~ 327 (434)
|||.+++.+++++|+++|++||+++|+||+|.++.+++ ...++..+....+ ++++++||||.+|++|+|+||++
T Consensus 188 PtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~ 267 (412)
T 1yaa_A 188 PTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFH 267 (412)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEE
Confidence 99999999999999999999999999999999998765 3333433322234 79999999999998899999998
Q ss_pred --e-----Chh----hHHHHHHHhhccccCCchHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHhhhCC--
Q 013883 328 --A-----PPH----LTWGVRQAHSFLTFATSTPMQWAATAALRAP------ETYYEELKRDYSAKKAILVEGLNAVG-- 388 (434)
Q Consensus 328 --~-----~~~----~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~------~~~~~~~~~~~~~~~~~l~~~L~~~g-- 388 (434)
+ +++ +++++....+....+++.+.|.++..+|++. ++++++++++++++++.+.+.|++++
T Consensus 268 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 347 (412)
T 1yaa_A 268 LALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTP 347 (412)
T ss_dssp EECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred EEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 7 565 7777777555555667889999999999975 25788999999999999999999876
Q ss_pred --CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 389 --FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 389 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
+++.++++++|+|+++ +...+ .++++++||.+.|
T Consensus 348 ~~~~~~~~~~~~~~~~~~------~~~~~-~~~l~~~gi~v~~ 383 (412)
T 1yaa_A 348 GNWDHIVNQCGMFSFTGL------TPQMV-KRLEETHAVYLVA 383 (412)
T ss_dssp SCCTHHHHCCSSEEECCC------CHHHH-HHHHHHHCEECCT
T ss_pred CCeeeeccCceEEEeeCC------CHHHH-HHHHHhCCEEecc
Confidence 8888889999999765 24344 7777778999887
No 63
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=5.2e-42 Score=344.58 Aligned_cols=320 Identities=23% Similarity=0.421 Sum_probs=263.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHH-----------cCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCCCCcEEEc
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIR-----------DGKNQYARGHGVPEFNSAIASRFKKDSGLE--VDPEKEVTVT 176 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~--~~~~~~i~~t 176 (434)
+.|+|+.+...+++ +.+.+++.+... .....|++..|..+||+++++++++.+|.. ++++ +|+++
T Consensus 37 ~~i~l~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~-~i~~~ 114 (428)
T 1iay_A 37 GVIQMGLAENQLCL-DLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE-RVVMA 114 (428)
T ss_dssp SBEECSSCCCCSSH-HHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT-SCEEE
T ss_pred ceeeeccccchhhH-HHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChh-hEEEc
Confidence 67899988665544 467776664321 113579888899999999999999888866 6777 89999
Q ss_pred CChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH-HHcCCEEEEEEcCC-CCCCCCHHHHHhhccc------CCcEEEe
Q 013883 177 SGCTEAIAATILGLINPGDEVILFAPFYDSYEATL-SMAGAKIKCITLRP-PDFAIPIEELKSTISK------NTRAILM 248 (434)
Q Consensus 177 ~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~-~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~i~~ 248 (434)
+|+++++..++.+++++||+|++++|+|..+...+ ...|++++.+|+++ +++.+|++.+++++++ ++++|++
T Consensus 115 ~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 194 (428)
T 1iay_A 115 GGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLIL 194 (428)
T ss_dssp EHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEE
Confidence 99999999999999999999999999999998755 46899999999875 3578999999998864 6889999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCC-------CCceEEEccCChhhcccc
Q 013883 249 NTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGM-------YERTVTMNSLGKTFSLTG 320 (434)
Q Consensus 249 ~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~-------~~~~i~i~S~SK~~g~~G 320 (434)
++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..++..+... .++++++.||||.+|++|
T Consensus 195 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G 274 (428)
T 1iay_A 195 TNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG 274 (428)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG
T ss_pred cCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC
Confidence 99999999999999999999999999999999999999887653 2233333322 578999999999999999
Q ss_pred ceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCe
Q 013883 321 WKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPE---TYYEELKRDYSAKKAILVEGLNAVGFKVFPSSG 396 (434)
Q Consensus 321 ~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 396 (434)
+|+||+++ ++++++.++.... .++.+.+.|.++..+|++.+ +++++++++++++++.+.+.|+++|+.+.++++
T Consensus 275 lr~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 352 (428)
T 1iay_A 275 FRVGIIYSFNDDVVNCARKMSS--FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNA 352 (428)
T ss_dssp GCEEEEEESCHHHHHHHHHHHT--TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSS
T ss_pred ceEEEEEeCCHHHHHHHHHHHh--cccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCe
Confidence 99999999 6788888876543 36788999999999998742 467888999999999999999999998888878
Q ss_pred eEEEeeecCCCCC----CCHHHHHHHHHHhcCeEEECCCCC
Q 013883 397 TYFVVVDHTPFGH----ETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 397 ~~~~~~~~~~~~~----~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
++|+|+++..... .+..+++++|++++||.+.||+.|
T Consensus 353 g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~ 393 (428)
T 1iay_A 353 GLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSF 393 (428)
T ss_dssp SSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGG
T ss_pred eEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhh
Confidence 8899998753210 124578888887779999999866
No 64
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=1.9e-41 Score=341.33 Aligned_cols=320 Identities=23% Similarity=0.389 Sum_probs=264.2
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCC------------CCCCCCCCcHHHHHHHHHHHHhhcC--CCCCCCCcEEE
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGK------------NQYARGHGVPEFNSAIASRFKKDSG--LEVDPEKEVTV 175 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~------------~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~~i~~ 175 (434)
+.|+|+.+...+. .+.+.+++.+...... ..|.+..|..+||+++++++++..+ ..++++ +|++
T Consensus 39 ~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~-~v~~ 116 (435)
T 3piu_A 39 GIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN-HLVL 116 (435)
T ss_dssp SBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG-GEEE
T ss_pred CeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH-HEEE
Confidence 5789998765544 5566666655433211 4699999999999999999986544 556777 8999
Q ss_pred cCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH-HcCCEEEEEEcCC-CCCCCCHHHHHhhccc------CCcEEE
Q 013883 176 TSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS-MAGAKIKCITLRP-PDFAIPIEELKSTISK------NTRAIL 247 (434)
Q Consensus 176 t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~i~ 247 (434)
++|+++++..++.+++++||.|+++.|+|.++...+. ..|++++.+++++ .++.+|++.+++++++ ++++|+
T Consensus 117 ~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 196 (435)
T 3piu_A 117 TAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVL 196 (435)
T ss_dssp EEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEE
Confidence 9999999999999999999999999999999998888 7899999999985 3477999999999976 789999
Q ss_pred ecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC-ccccCCCCC---------CCceEEEccCChhhc
Q 013883 248 MNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDH-ISIASLPGM---------YERTVTMNSLGKTFS 317 (434)
Q Consensus 248 ~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~-~~~~~~~~~---------~~~~i~i~S~SK~~g 317 (434)
+++||||||.+++.+++++|+++|++||+++|+||+|.++.|++.. ..+..+... +++++++.||||.+|
T Consensus 197 i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g 276 (435)
T 3piu_A 197 VTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLG 276 (435)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSC
T ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccC
Confidence 9999999999999999999999999999999999999998887643 233222222 578899999999999
Q ss_pred cccceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHhhhCCCEeec
Q 013883 318 LTGWKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP---ETYYEELKRDYSAKKAILVEGLNAVGFKVFP 393 (434)
Q Consensus 318 ~~G~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 393 (434)
++|+|+||+++ ++++.+.++.... .++.+.+.+.++..+|.+. ++++++++++++++++.+.+.|++.|+.+.+
T Consensus 277 ~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 354 (435)
T 3piu_A 277 LPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLN 354 (435)
T ss_dssp CGGGCEEEEEESCHHHHHHHHHHGG--GSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECC
T ss_pred CCceeEEEEEeCCHHHHHHHHHHhh--cCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 99999999999 4667777765543 4567888999999999874 3366788899999999999999999999999
Q ss_pred CCeeEEEeeecCCCCCC----CHHHHHHHHHHhcCeEEECCCCC
Q 013883 394 SSGTYFVVVDHTPFGHE----TDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 394 ~~~~~~~~~~~~~~~~~----~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+++++|+|+++...... +..+++++|++++||.+.||+.|
T Consensus 355 ~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~ 398 (435)
T 3piu_A 355 GNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSC 398 (435)
T ss_dssp CCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGG
T ss_pred CCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCccc
Confidence 99999999987542110 24578888988889999998876
No 65
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=9.5e-41 Score=329.27 Aligned_cols=294 Identities=26% Similarity=0.373 Sum_probs=257.2
Q ss_pred HHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHH
Q 013883 129 DAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE 208 (434)
Q Consensus 129 ~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~ 208 (434)
+++.+++......|.+..|..+||+++++++. .++++ +|++++|+++++..++.+++++||+|++++|+|.++.
T Consensus 46 ~~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~-----~~~~~-~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~ 119 (375)
T 3op7_A 46 EDFYKKLQGTKLNYGWIEGSPAFKKSVSQLYT-----GVKPE-QILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLY 119 (375)
T ss_dssp HHHHHHHHTSCCSSCCTTCCHHHHHHHHTTSS-----SCCGG-GEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHH
T ss_pred HHHHHHHhcCCcCCCCCCChHHHHHHHHHHhc-----cCChh-hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHH
Confidence 35566677777889999999999999999874 25567 8999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCcc
Q 013883 209 ATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKL 287 (434)
Q Consensus 209 ~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~ 287 (434)
..+...|++++.+++++ .++.+|++.+++++++++++|++++||||||.+++.+++++|+++|++||+++|+||+|.++
T Consensus 120 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~ 199 (375)
T 3op7_A 120 DIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSF 199 (375)
T ss_dssp HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCC
T ss_pred HHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 99999999999999874 45778999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHH
Q 013883 288 AFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYE 367 (434)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~ 367 (434)
.++ ....+ ....++++++.||||.+|++|+|+||+++++++++.++..+....++.+.+.+.++..+|+..+++++
T Consensus 200 ~~~-~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 275 (375)
T 3op7_A 200 SEL-DVPSI---IEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILE 275 (375)
T ss_dssp SSS-CCCCH---HHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHH
T ss_pred ccc-CCCch---hhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHH
Confidence 765 21222 22356789999999999999999999999999999998888777888899999999999997677888
Q ss_pred HHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 368 ELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 368 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
+.+++++++++.+.+.|++. ++.+..+.++++.|+.+.. +. +..+++++|++++||.+.||+.|+
T Consensus 276 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ll~~~gi~v~~g~~~~ 341 (375)
T 3op7_A 276 RNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAV-DM-PMEDFCLQLLQEHGVLLVPGNRFE 341 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECC-SS-CHHHHHHHHHHHHCEECEEGGGGT
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCC-CC-CHHHHHHHHHHhCCEEEeChhhhC
Confidence 89999999999999999986 7888888888888887642 22 577899999878899999998763
No 66
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=3.1e-40 Score=323.58 Aligned_cols=303 Identities=18% Similarity=0.313 Sum_probs=261.3
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+.+.|||+.|.+.+++++.+.+++.+++.+ ...|+ ..+..++|++++++++ ++++ +|++|+|+++++.+++
T Consensus 25 ~~~~idl~~~~~~~~~~~~v~~a~~~~~~~-~~~y~-~~~~~~l~~~la~~~~------~~~~-~i~~~~g~t~al~~~~ 95 (361)
T 3ftb_A 25 GRELLDYSSNINPLGIPKSFLNNIDEGIKN-LGVYP-DVNYRRLNKSIENYLK------LKDI-GIVLGNGASEIIELSI 95 (361)
T ss_dssp ---CEETTCCCCTTCSCHHHHTTHHHHHHG-GGSCC-CTTCHHHHHHHHHHHT------CCSC-EEEEESSHHHHHHHHH
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHHH-hcCCC-CccHHHHHHHHHHHhC------CCcc-eEEEcCCHHHHHHHHH
Confidence 347899999988888899999999988876 45674 4688999999999995 6677 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
..+ |+|+++.|+|.++...++..|++++.+++++ +..++++.+++++++ +++|++++||||||.+++.+++++|
T Consensus 96 ~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i 169 (361)
T 3ftb_A 96 SLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDE-NMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHV 169 (361)
T ss_dssp TTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCT-TSCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHH
T ss_pred HHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCc-ccCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 888 8999999999999999999999999999985 456788999999988 9999999999999999999999999
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEE-eChhhHHHHHHHhhccccC
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAI-APPHLTWGVRQAHSFLTFA 346 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~-~~~~~~~~l~~~~~~~~~~ 346 (434)
+++|++||+++|+||+|.++.++ ............++++++.|+||.+|++|+|+||++ .++++++.++.... .++
T Consensus 170 ~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~--~~~ 246 (361)
T 3ftb_A 170 LKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQN--PWN 246 (361)
T ss_dssp HHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSC--TTC
T ss_pred HHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCC--CCC
Confidence 99999999999999999999886 444444444556789999999999999999999999 89999888876543 578
Q ss_pred CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCE-eecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcC
Q 013883 347 TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFK-VFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVG 424 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~G 424 (434)
.+.+.+.++..+|++ .+++++.+++++++++.+.+.|+++ ++. +.++.+++ +|+++.. .+..+++++|.++ |
T Consensus 247 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~l~~~l~~~-g 320 (361)
T 3ftb_A 247 INCFAEMAAINCLKD-TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANF-VLCRLEN---ISGEKLYDSLLKE-D 320 (361)
T ss_dssp SCHHHHHHHHHTSSC-HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSSE-EEEEESS---SCHHHHHHHHHTT-T
T ss_pred CCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCeE-EEEEcCC---CCHHHHHHHHHHC-C
Confidence 899999999999996 6789999999999999999999988 788 77777765 5677643 2577899988776 9
Q ss_pred eEEECCCCCC
Q 013883 425 VVAIPTSVFY 434 (434)
Q Consensus 425 V~v~pG~~F~ 434 (434)
|.+.||+.|.
T Consensus 321 i~v~~g~~~~ 330 (361)
T 3ftb_A 321 IVIRRCCNFI 330 (361)
T ss_dssp EECEECTTST
T ss_pred eEEeeCccCC
Confidence 9999998773
No 67
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=1.1e-40 Score=327.03 Aligned_cols=294 Identities=20% Similarity=0.323 Sum_probs=248.8
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.|+|+.|.+++++++.+ ++ .....|++. +..+||++++++++ ++++ +|++++|+++++.+++++
T Consensus 30 ~~i~l~~~~~~~~~~~~v------a~-~~~~~Y~~~-~~~~lr~~la~~~~------~~~~-~v~~~~G~~~ai~~~~~~ 94 (356)
T 1fg7_A 30 GDVWLNANEYPTAVEFQL------TQ-QTLNRYPEC-QPKAVIENYAQYAG------VKPE-QVLVSRGADEGIELLIRA 94 (356)
T ss_dssp CSEECSSCCCSSCCCCCC------CC-CCTTSCCCS-SCHHHHHHHHHHHT------SCGG-GEEEESHHHHHHHHHHHH
T ss_pred ceEEeeCCCCCCCCCHhH------hh-hhhccCCCc-cHHHHHHHHHHHhC------CChH-HEEEcCCHHHHHHHHHHH
Confidence 679999999888877766 22 245679876 48999999999985 5666 899999999999999999
Q ss_pred ccCCC-CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 190 LINPG-DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 190 l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
++++| |+|++++|+|+.+...++..|++++.+|+++ ++.+|++.++++++ ++++|++++||||||.+++.+++++|+
T Consensus 95 ~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~ 172 (356)
T 1fg7_A 95 FCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLD-NWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLL 172 (356)
T ss_dssp HCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCT-TSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred HhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCC-CCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999 9999999999999999999999999998874 67899999999998 889999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
++|+ +|+++|+||+|.++.. ..++..+....++++++.||||.+|++|+|+||+++++++++.++..+. .++.+
T Consensus 173 ~~~~-~~~~li~De~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~--~~~~~ 246 (356)
T 1fg7_A 173 ELTR-GKAIVVADEAYIEFCP---QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIA--PYPLS 246 (356)
T ss_dssp HHHT-TTCEEEEECTTGGGSG---GGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSC--SSCSC
T ss_pred HhCC-CCCEEEEEccchhhcC---CCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHHHHHHHHhcC--CCCCC
Confidence 9999 9999999999998762 1233333334578999999999999999999999999999988887653 45788
Q ss_pred hHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHhhhCC--CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCe
Q 013883 349 TPMQWAATAALRAPE-TYYEELKRDYSAKKAILVEGLNAVG--FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGV 425 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV 425 (434)
.+.|.++.++|++.. +++++.+++++++++.+.+.|++++ +.+.+ .+++|+|+++. +..+++++| .++||
T Consensus 247 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~-----~~~~l~~~L-~~~gI 319 (356)
T 1fg7_A 247 TPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFD-SETNYILARFK-----ASSAVFKSL-WDQGI 319 (356)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECC-CSSSEEEEEET-----THHHHHHHH-HHTTE
T ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECC-CCCeEEEEECC-----CHHHHHHHH-HHCCE
Confidence 999999999997522 2388889999999999999999886 44444 45667788873 467888888 45699
Q ss_pred EEEC-CCCC
Q 013883 426 VAIP-TSVF 433 (434)
Q Consensus 426 ~v~p-G~~F 433 (434)
.+.| |..|
T Consensus 320 ~v~~~g~~~ 328 (356)
T 1fg7_A 320 ILRDQNKQP 328 (356)
T ss_dssp ECEECTTST
T ss_pred EEEECCCCC
Confidence 9999 8765
No 68
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=7e-41 Score=337.85 Aligned_cols=322 Identities=18% Similarity=0.243 Sum_probs=261.1
Q ss_pred hcCCee-EeCCCCCCCCCc--HHHHHHHHHHHHc-------C-----CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCC
Q 013883 107 IKHGAI-NLGQGFPNFDGP--DFVKDAAIQAIRD-------G-----KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEK 171 (434)
Q Consensus 107 ~~~~~i-~l~~g~p~~~~~--~~v~~~~~~~~~~-------~-----~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~ 171 (434)
..+++| +|+.|.|+.+++ +.+.+++.+.+.+ . ...|.+..|.++||+++++++.+.+|..++++
T Consensus 29 ~~~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~- 107 (444)
T 3if2_A 29 KSDQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSE- 107 (444)
T ss_dssp HSSSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-
T ss_pred cCchhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHH-
Confidence 446899 999999987433 4455555555544 2 15799999999999999999999999989998
Q ss_pred cEEEcCChHHHHHHHHHHccCCCC--------------eEEEc-CCCchhHHHH------HHHcCCEEEEEEcCCC----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGD--------------EVILF-APFYDSYEAT------LSMAGAKIKCITLRPP---- 226 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd--------------~Vlv~-~p~y~~~~~~------~~~~G~~~~~v~~~~~---- 226 (434)
+|++|+|+++++.+++.+++++|| +|+++ +|+|..|... +...|.+++.++.+++
T Consensus 108 ~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 187 (444)
T 3if2_A 108 NIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFF 187 (444)
T ss_dssp GEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEE
T ss_pred HEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCcc
Confidence 899999999999999999999998 78876 9999998763 4557888888888752
Q ss_pred CCCCCHHHHHhh---cccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 227 DFAIPIEELKST---ISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 227 ~~~~d~~~l~~~---i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
++.+|++.|+++ +++++++|++++||||||.+++.+++++|+++|++||+++|+||+|..+......... .....
T Consensus 188 ~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~--~~~~~ 265 (444)
T 3if2_A 188 KYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDA--HLNWD 265 (444)
T ss_dssp EEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCC--CCCCC
T ss_pred ccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccc--cccCC
Confidence 257999999998 6778999999999999999999999999999999999999999999864321111111 11235
Q ss_pred CceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCCh--HHHHH-HHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPE--TYYEE-LKRDYSAKKAIL 380 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~--~~~~~-~~~~~~~~~~~l 380 (434)
++++++.||||. +++|+|+||+++++++++.+........++.+.+.|.++..+|+... ++.++ +++.++++++.+
T Consensus 266 ~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 344 (444)
T 3if2_A 266 NNTILCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLA 344 (444)
T ss_dssp TTEEEEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCEEEEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH
Confidence 789999999997 77999999999999999999888877788899999999999999753 23333 677788888888
Q ss_pred HHHhhh----CCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 381 VEGLNA----VGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 381 ~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
.+.|++ .++.+..+++++|+|+.+...+. +..+++++|. ++||.+.||+.|+
T Consensus 345 ~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~l~~~l~-~~gi~v~~g~~~~ 400 (444)
T 3if2_A 345 VKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPI-STLDLYERLK-AKGTLIVPSEYFF 400 (444)
T ss_dssp HHHHHHHSSSSSEEEECCCBSSEEEEEETTCSS-CHHHHHHHHH-HTTEECEEGGGSC
T ss_pred HHHHHHhcccCCceEecCCccEEEEEEcCCCCC-CHHHHHHHHH-HCCeEEecchhhc
Confidence 877765 36788888999999998854333 5778888875 5699999998874
No 69
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=2.3e-40 Score=325.53 Aligned_cols=301 Identities=21% Similarity=0.346 Sum_probs=261.7
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CCCCcEEEcCChHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEV-DPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~-~~~~~i~~t~G~~~ai~~~ 186 (434)
.+.|+|+.|.+++++++.+.+++.+++.+ ....|++ .|..+||++++++++ + +++ +|++|+|+++++.++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g------~~~~~-~i~~~~g~t~a~~~~ 101 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQ------VPAGM-EVLLGNGSDEIISML 101 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHT------CCTTC-EEEEEEHHHHHHHHH
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhC------CCCcc-eEEEcCCHHHHHHHH
Confidence 47899999999999999999999998875 4567876 488999999999985 3 456 899999999999999
Q ss_pred HHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHH
Q 013883 187 ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
+.+++++||+|++++|+|.++...++..|++++.+++++ ++.+|++.+++++++ ++++|++++||||||.+++.++++
T Consensus 102 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~ 180 (367)
T 3euc_A 102 ALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA-DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADME 180 (367)
T ss_dssp HHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT-TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHH
T ss_pred HHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC-CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHH
Confidence 999999999999999999999999999999999999986 788999999999988 899999999999999999999999
Q ss_pred HHHHHHHHc--CcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc
Q 013883 266 VIASLCIEN--DVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 343 (434)
Q Consensus 266 ~i~~la~~~--~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~ 343 (434)
+|+++|++| |+++|+||+|.+|...+ ... .+ ...++++++.||||. +++|+|+||+++++++++.++....
T Consensus 181 ~i~~~~~~~~~~~~li~De~~~~~~~~~-~~~--~~-~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~~~~~-- 253 (367)
T 3euc_A 181 AIVRAAQGSVCRSLVVVDEAYQPFAQES-WMS--RL-TDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLDKVRP-- 253 (367)
T ss_dssp HHHHHTBTTSCBCEEEEECTTCCSSSCC-SGG--GG-GTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHGGGCC--
T ss_pred HHHHhhhhcCCCcEEEEeCcchhhcccc-hHH--HH-hhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHHHhCC--
Confidence 999999999 99999999999976432 111 12 235788999999999 8899999999999999888766543
Q ss_pred ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHh
Q 013883 344 TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKE 422 (434)
Q Consensus 344 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 422 (434)
.++.+.+.+.++..+|+. .+++++.+++++++++.+.+.|+++ |+.+.++. ++|+|+++. +..++.++| .+
T Consensus 254 ~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~-----~~~~l~~~l-~~ 325 (367)
T 3euc_A 254 PYNVNVLTEATALFALEH-VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSA-ANFLLARVP-----DAAQTFDRL-LA 325 (367)
T ss_dssp SSCCCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCCS-SSEEEEECS-----CHHHHHHHH-HT
T ss_pred CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCC-CeEEEEECC-----CHHHHHHHH-HH
Confidence 577899999999999998 7788999999999999999999998 89866554 456778764 477888887 45
Q ss_pred cCeEEECCCCC
Q 013883 423 VGVVAIPTSVF 433 (434)
Q Consensus 423 ~GV~v~pG~~F 433 (434)
+||.+.||+.|
T Consensus 326 ~gi~v~~~~~~ 336 (367)
T 3euc_A 326 RKVLIKNVSKM 336 (367)
T ss_dssp TTEECEECGGG
T ss_pred CCeEEEECCcc
Confidence 69999999865
No 70
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=3.2e-41 Score=334.82 Aligned_cols=312 Identities=18% Similarity=0.206 Sum_probs=252.6
Q ss_pred CCeeEeCCCCC---C--CCCcHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE--cCChH
Q 013883 109 HGAINLGQGFP---N--FDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV--TSGCT 180 (434)
Q Consensus 109 ~~~i~l~~g~p---~--~~~~~~v~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~--t~G~~ 180 (434)
++.|||+.|.+ + .++++.+.+++.+++.. ..+.|.+..|..+||+++++++.+. + ++++ +|++ |+|++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~--~~~~-~v~~~~~~g~~ 101 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD-G--LKSE-TTATLATVGGT 101 (394)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-G--CCGG-GEEEEEEEHHH
T ss_pred ccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-C--CCcc-cEEEEecCCch
Confidence 47899999964 2 24578899998887765 4567998889999999999998532 2 2566 8998 99999
Q ss_pred HHHHHHHHHccC--CCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccC---CcEEEecCCCCC
Q 013883 181 EAIAATILGLIN--PGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKN---TRAILMNTPHNP 254 (434)
Q Consensus 181 ~ai~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~---~~~i~~~~p~NP 254 (434)
+++.+++..+.. +||+|++++|+|+++...+...|++++.+++++ +++.+|++.+++++++. ++++++++||||
T Consensus 102 ~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~np 181 (394)
T 2ay1_A 102 GALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNP 181 (394)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTT
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 999999887754 999999999999999999999999999999853 36889999999998753 567778999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC--CCccccCCCCCCCceEEEccCChhhccccceeeeEEe---C
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM--DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA---P 329 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~--~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~---~ 329 (434)
||.+++.+++++|+++|++||+++|+||+|.++.+++ ...++..+....++++++.||||.+|++|+|+||+++ +
T Consensus 182 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~ 261 (394)
T 2ay1_A 182 TGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCAD 261 (394)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCC
Confidence 9999999999999999999999999999999988753 2223333322346789999999999999999999998 5
Q ss_pred hhhHHH----HHHHhhccccCCchHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHhhhCC----CEeecCC
Q 013883 330 PHLTWG----VRQAHSFLTFATSTPMQWAATAALRAP------ETYYEELKRDYSAKKAILVEGLNAVG----FKVFPSS 395 (434)
Q Consensus 330 ~~~~~~----l~~~~~~~~~~~~~~~q~a~~~~L~~~------~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~ 395 (434)
+++++. +....+....+++.+.|.++..+|++. ++++++++++++++++.+.+.|++++ +.+.+++
T Consensus 262 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 341 (394)
T 2ay1_A 262 AATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEH 341 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHC
T ss_pred HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCC
Confidence 655433 333333444556889999999999875 35788899999999999999998864 7777888
Q ss_pred eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 396 GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+++|+|+++. . +++.++++++||.+.||-
T Consensus 342 ~g~~~~~~~~------~-~~~~~~l~~~gi~v~~~~ 370 (394)
T 2ay1_A 342 RGMFSRLGAT------P-EQVKRIKEEFGIYMVGDS 370 (394)
T ss_dssp CSSEEECCCC------H-HHHHHHHHHHCEECCTTC
T ss_pred ceEEEeeCCC------H-HHHHHHHHhCCEEecCCC
Confidence 8999998762 3 345566677799999874
No 71
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=6.3e-42 Score=353.13 Aligned_cols=318 Identities=20% Similarity=0.279 Sum_probs=258.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhh-cC-CCCCCCCcEEEcCChHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKD-SG-LEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~-~g-~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
++|+|+.|.|++++++.+.+ +.+++.. ...|.+..|..++|+++++++... .+ ..+++.++|++|+|+++++..++
T Consensus 104 ~~i~l~~g~~~~~~~~~v~a-~~~~~~~-~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~ 181 (533)
T 3f6t_A 104 DAVNYCHTELGLNRDKVVAE-WVNGAVA-NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAF 181 (533)
T ss_dssp HHHHHHHHTTCCCHHHHHHH-HHHHHHT-CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHH
T ss_pred hheeccCCCCCcCCcHHHHH-HHHHHHh-CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHH
Confidence 46889999998875555554 4454443 233447889999999999999766 34 55554238999999999999999
Q ss_pred HH-----ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC---CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCC
Q 013883 188 LG-----LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP---PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMF 259 (434)
Q Consensus 188 ~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~---~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~ 259 (434)
.+ ++++||+|++++|+|.++...+...|++++.++++. .++++|++.+++++++++++|++++||||||.++
T Consensus 182 ~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~ 261 (533)
T 3f6t_A 182 HSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEF 261 (533)
T ss_dssp HHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCC
T ss_pred HHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCcccc
Confidence 98 789999999999999999999999999999999863 4688999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHH-HcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh-----hH
Q 013883 260 TREELNVIASLCI-ENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH-----LT 333 (434)
Q Consensus 260 ~~e~l~~i~~la~-~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~-----~~ 333 (434)
+.+++++|+++|+ +||++||+||+|.++.++. ..+... ..+++++++||||.+|++|+|+||++++++ ++
T Consensus 262 ~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~--~~~~~~--~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li 337 (533)
T 3f6t_A 262 DTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF--KSIYSV--VPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNI 337 (533)
T ss_dssp CHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC--CCHHHH--SGGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccccccCc--cCHhhc--CCCCEEEEecCcccCCCcccceEEEEECcHHHHHHHH
Confidence 9999999999999 6899999999999987642 233332 247899999999999999999999999876 33
Q ss_pred HHH--------------------------------HHHhhccccCCchHHHHH----HHHHHh------CChHHHHHHHH
Q 013883 334 WGV--------------------------------RQAHSFLTFATSTPMQWA----ATAALR------APETYYEELKR 371 (434)
Q Consensus 334 ~~l--------------------------------~~~~~~~~~~~~~~~q~a----~~~~L~------~~~~~~~~~~~ 371 (434)
+.+ +........+.+.+.|.+ +..+|. ..+++++++++
T Consensus 338 ~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~ 417 (533)
T 3f6t_A 338 AHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARK 417 (533)
T ss_dssp HTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHH
T ss_pred HhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHH
Confidence 322 233344567788888888 456674 34678999999
Q ss_pred HHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCC-----C---------CCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 372 DYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF-----G---------HETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 372 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-----~---------~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
.++++++.+.+.|. .++.+.+++++||+|+++... + ..++.+++.+|++++||++.||+.|+
T Consensus 418 ~~~~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~ 493 (533)
T 3f6t_A 418 LVSERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFG 493 (533)
T ss_dssp HHHHHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEEC
T ss_pred HHHHHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccC
Confidence 99999999999998 888888999999999987421 1 01466888889888999999998774
No 72
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=1.9e-44 Score=358.17 Aligned_cols=320 Identities=23% Similarity=0.329 Sum_probs=275.2
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.|||+.|.|++++++.+.+++.+++.+....|.+. ..++|+++++++.+.+|..++++ +|++++|+++++.+++.+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~-~v~~~~g~~~a~~~~~~~ 108 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDKE-DIVFVEGVVPAISIAIQA 108 (392)
Confidence 679999999999999999999998887666778775 78999999999998888878888 899999999999999999
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCC--CCCCCHHHHHhhcc-cCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP--DFAIPIEELKSTIS-KNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~--~~~~d~~~l~~~i~-~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
++++||+|+++.|+|+++...+...|++++.++++++ ++.+|++.++++++ .++++|++++||||||.+++.+++++
T Consensus 109 ~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~ 188 (392)
T 3b1d_A 109 FTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQ 188 (392)
Confidence 9999999999999999999999999999999998532 36689999999997 57899999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCC-CCceEEEccCChhhccccceeeeEEeCh-hhHHHHHHHhhcc
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGM-YERTVTMNSLGKTFSLTGWKIGWAIAPP-HLTWGVRQAHSFL 343 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~~~~~~-~~~~~l~~~~~~~ 343 (434)
|+++|++||+++|+||+|.++.+++. ..++..+... .++++++.||||.+|++|+|+||+++++ ++++.++......
T Consensus 189 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 268 (392)
T 3b1d_A 189 IGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVN 268 (392)
Confidence 99999999999999999999988653 3344444322 5788999999999999999999999975 5888887766554
Q ss_pred cc-CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh-C-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHH
Q 013883 344 TF-ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA-V-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLI 420 (434)
Q Consensus 344 ~~-~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll 420 (434)
.+ +.+.+.|.++..+|++.+++++++++.++++++.+.+.|++ + |+.+.+++++|++|+++...+. +..+++++|+
T Consensus 269 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~l~ 347 (392)
T 3b1d_A 269 NHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGL-TDDALFTLLH 347 (392)
Confidence 43 56888899999999876678899999999999999999987 4 8888899999999988753222 4567888887
Q ss_pred HhcCeEEECCCCC
Q 013883 421 KEVGVVAIPTSVF 433 (434)
Q Consensus 421 ~~~GV~v~pG~~F 433 (434)
+++||.+.||..|
T Consensus 348 ~~~gi~v~~g~~f 360 (392)
T 3b1d_A 348 DQAKVILNRGSDY 360 (392)
Confidence 6779999999876
No 73
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=8.5e-40 Score=321.41 Aligned_cols=301 Identities=17% Similarity=0.291 Sum_probs=253.3
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.|||+.|.+++++++.+.+++.+++.+ ...|++ .|..+||++++++++ ++++ +|++|+|+++++.+++..
T Consensus 25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~-~~~y~~-~~~~~l~~~la~~~~------~~~~-~v~~~~g~~~al~~~~~~ 95 (364)
T 1lc5_A 25 QLLDFSANINPLGMPVSVKRALIDNLDC-IERYPD-ADYFHLHQALARHHQ------VPAS-WILAGNGETESIFTVASG 95 (364)
T ss_dssp GSEECSSCCCTTCCCHHHHHHHHHTGGG-GGSCCC-TTCHHHHHHHHHHHT------SCGG-GEEEESSHHHHHHHHHHH
T ss_pred ceEEeccccCCCCCCHHHHHHHHHHHHH-hhcCCC-CCHHHHHHHHHHHHC------cCHH-HEEECCCHHHHHHHHHHH
Confidence 5799999988788888999998887754 456865 478999999999985 5566 899999999999999998
Q ss_pred ccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+ +||+|++++|+|+++...++..|++++.+|.++ +++.+ ++.+.+.+++++++|++++||||||.+++.+++++|+
T Consensus 96 ~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 172 (364)
T 1lc5_A 96 L--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIA 172 (364)
T ss_dssp H--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred c--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 8 779999999999999999999999999999875 24443 5767777777899999999999999999999999999
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEE-eChhhHHHHHHHhhccccCC
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAI-APPHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~-~~~~~~~~l~~~~~~~~~~~ 347 (434)
++|++||+++|+||+|.++.+++ .+...+.+..++++++.|+||.+|++|+|+||++ +++++++.++.... +++.
T Consensus 173 ~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~--~~~~ 248 (364)
T 1lc5_A 173 DRCKSLNINLILDEAFIDFIPHE--TGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQM--PWSV 248 (364)
T ss_dssp HHHHHHTCEEEEECTTGGGSTTC--CCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSC--TTCS
T ss_pred HHhhhcCcEEEEECcChhhccCc--cchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCC--CCCC
Confidence 99999999999999999987652 2222222335788999999999999999999999 99999988877653 6788
Q ss_pred chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 348 STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
+.+.+.++..+|++ .+++++++++++++++.+.+.|+++ |+.+.++.++ |+|+++.. +..+++++|+++ ||.
T Consensus 249 ~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~-~~~~~~~~----~~~~l~~~l~~~-gi~ 321 (364)
T 1lc5_A 249 NALAALAGEVALQD-SAWQQATWHWLREEGARFYQALCQLPLLTVYPGRAN-YLLLRCER----EDIDLQRRLLTQ-RIL 321 (364)
T ss_dssp CHHHHHHHHHGGGC-HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSS-EEEEEESC----TTCCHHHHHHTT-TEE
T ss_pred CHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCCCe-EEEEECCC----cHHHHHHHHHHC-CcE
Confidence 99999999999997 6788999999999999999999987 8888776655 55677642 234688888755 999
Q ss_pred EECCCCC
Q 013883 427 AIPTSVF 433 (434)
Q Consensus 427 v~pG~~F 433 (434)
+.||+.|
T Consensus 322 v~~g~~~ 328 (364)
T 1lc5_A 322 IRSCANY 328 (364)
T ss_dssp CEECTTS
T ss_pred EeeCccc
Confidence 9999877
No 74
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=3.9e-39 Score=317.34 Aligned_cols=302 Identities=20% Similarity=0.313 Sum_probs=256.8
Q ss_pred eeEeCCCCCCCCCcHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 111 AINLGQGFPNFDGPDFVKDAAIQAIRDG---KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 111 ~i~l~~g~p~~~~~~~v~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
.|||+.|.+++++++.+.+++.+++.+. ...|++..+ .+||+++++++.+.+|..++++ +|++++|+++++..++
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~-~v~~~~G~~~al~~~~ 109 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRD-NLWAANGSNEILQQLL 109 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGG-GEEEESHHHHHHHHHH
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChH-hEEECCChHHHHHHHH
Confidence 3899999888889999999999888652 567887766 7999999999998888878887 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
.+++++||+|++++|+|+++...++..|++++.+|.++ ++.+|++.+++++++ ++++|++++||||||.+++.+++++
T Consensus 110 ~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~ 188 (369)
T 3cq5_A 110 QAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGA-DFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVER 188 (369)
T ss_dssp HHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCT-TSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCc-CCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999764 678999999999987 8999999999999999999877666
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCC-ceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcccc
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYE-RTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTF 345 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~-~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~ 345 (434)
|++ .+++++|+||+|.++.++ .+...+.+..+ +++++.||||.+|++|+|+||+++++++++.++.... .+
T Consensus 189 l~~---~~~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~--~~ 260 (369)
T 3cq5_A 189 IIN---VAPGIVIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRL--PY 260 (369)
T ss_dssp HHH---HCSSEEEEECTTGGGCCS---CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSC--TT
T ss_pred HHH---hCCCEEEEECCchhhcCC---cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCC--CC
Confidence 655 556999999999998754 22223322345 8899999999999999999999999998887775543 46
Q ss_pred CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCe
Q 013883 346 ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGV 425 (434)
Q Consensus 346 ~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV 425 (434)
+.+.+.+.++..+|++ .+++++.+++++++++.+.+.|++.|+.+.++.++ |+|+++. .+..+++++|. ++||
T Consensus 261 ~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~----~~~~~l~~~l~-~~gi 333 (369)
T 3cq5_A 261 HLSALSQAAAIVALRH-SADTLGTVEKLSVERVRVAARLEELGYAVVPSESN-FVFFGDF----SDQHAAWQAFL-DRGV 333 (369)
T ss_dssp CSCHHHHHHHHHHHHT-HHHHHTHHHHHHHHHHHHHHHHHHHTCEEECCSSS-EEEEECC----SSHHHHHHHHH-HTTE
T ss_pred CCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCEECCCCCe-EEEEECC----CCHHHHHHHHH-HCCE
Confidence 7889999999999987 56788899999999999999999889988866555 6677763 25778888885 5699
Q ss_pred EEECC
Q 013883 426 VAIPT 430 (434)
Q Consensus 426 ~v~pG 430 (434)
.+.||
T Consensus 334 ~v~~~ 338 (369)
T 3cq5_A 334 LIRDV 338 (369)
T ss_dssp ECBCC
T ss_pred EEEEC
Confidence 99997
No 75
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.8e-40 Score=342.56 Aligned_cols=314 Identities=18% Similarity=0.270 Sum_probs=248.6
Q ss_pred eeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHH-HhhcCCCC---CCCCcEEEcCChHHHHHHH
Q 013883 111 AINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRF-KKDSGLEV---DPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 111 ~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l-~~~~g~~~---~~~~~i~~t~G~~~ai~~~ 186 (434)
.|+|++|.|++++ +.+.+++.+.+. ...|++..|..+||+++++++ .+.++..+ +++ +|++|+|+++++..+
T Consensus 106 ~i~l~~g~~~~~~-~~~~~al~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~-~I~~t~G~~eal~~~ 181 (546)
T 2zy4_A 106 SLSYVRDQLGLDP-AAFLHEMVDGIL--GCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESV-NLFAVEGGTAAMAYI 181 (546)
T ss_dssp HHHHHHHTSCCCH-HHHHHHHHHHHH--TCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGE-EEEEEEHHHHHHHHH
T ss_pred hhecccCCCCCCC-hHHHHHHHHhhh--cCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcc-eEEEECCHHHHHHHH
Confidence 6789999888754 445455655553 367999999999999988765 44443322 355 899999999999999
Q ss_pred HHH-----ccCCCCeEEEcCCCchhHHHHHHH--cCCEEEEEEcCCC-CCCCCHHHHHhhcccCCcEEEecCCCCCcccC
Q 013883 187 ILG-----LINPGDEVILFAPFYDSYEATLSM--AGAKIKCITLRPP-DFAIPIEELKSTISKNTRAILMNTPHNPTGKM 258 (434)
Q Consensus 187 ~~~-----l~~~gd~Vlv~~p~y~~~~~~~~~--~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~ 258 (434)
+.+ ++++||+|++++|+|+.|...+.. .|++++.++.+++ ++.+|++.+++++.+++++|++++||||||.+
T Consensus 182 ~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~ 261 (546)
T 2zy4_A 182 FESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVK 261 (546)
T ss_dssp HHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBC
T ss_pred HHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCCCcc
Confidence 987 579999999999999999988655 4689999998753 47899999999888889999999999999999
Q ss_pred CCHHHHHHHHHHH--HHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh-hHHH
Q 013883 259 FTREELNVIASLC--IENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH-LTWG 335 (434)
Q Consensus 259 ~~~e~l~~i~~la--~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~-~~~~ 335 (434)
++.+++++|+++| +++|++||+||+|.+|.++ ..++.... .++++++.||||.+|++|+|+||++++++ ++++
T Consensus 262 ~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~--~~s~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~ 337 (546)
T 2zy4_A 262 MDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD--FQSLFAIC--PENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDL 337 (546)
T ss_dssp CCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT--CCCHHHHC--GGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHH
T ss_pred CCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc--CcCHHHhC--CCCEEEEEeCccccCCCCcceEEEEECCHHHHHH
Confidence 9999999999999 7899999999999998753 33343332 46899999999999999999999999875 7776
Q ss_pred HHHH-------------h-----------------------hccccCCchHHHHHH-----HHHHhCChHHHHHHHHHHH
Q 013883 336 VRQA-------------H-----------------------SFLTFATSTPMQWAA-----TAALRAPETYYEELKRDYS 374 (434)
Q Consensus 336 l~~~-------------~-----------------------~~~~~~~~~~~q~a~-----~~~L~~~~~~~~~~~~~~~ 374 (434)
+... . .....+.+.+.|.++ ..+|++.+.|.+++++.|+
T Consensus 338 l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~ 417 (546)
T 2zy4_A 338 ALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIR 417 (546)
T ss_dssp HHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 6321 1 022346778888764 3445556788999999999
Q ss_pred HHHHHHHHHhhhCCCEeecCCeeEEEeeecCCC---------------CCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 375 AKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF---------------GHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 375 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++++.+.+.|. .++.+.+++++||+|+++... +. ++.+++.++++++||.+.||+.|+
T Consensus 418 ~r~~~l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~-~~~~~l~~ll~~~gV~v~pG~~F~ 490 (546)
T 2zy4_A 418 RRETTLYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQS-STGDMLFRIADETGIVLLPGRGFG 490 (546)
T ss_dssp HHHHHHHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHC-CHHHHHHHHHHHHSCCCEESSCTT
T ss_pred HHHHHHHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccC-CHHHHHHHHHHHCCEEEeCccccC
Confidence 99999999996 667767889999999987421 11 244556667778899999999884
No 76
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=8.7e-41 Score=332.02 Aligned_cols=298 Identities=16% Similarity=0.179 Sum_probs=238.1
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHH--Hc--CCCCCCCCCCc-----HHHHHHHHHHHHhhcCCCCCCCCcEEEcCC
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAI--RD--GKNQYARGHGV-----PEFNSAIASRFKKDSGLEVDPEKEVTVTSG 178 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~--~~--~~~~Y~~~~G~-----~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G 178 (434)
+.++|||+.|.|+++.++++.+++.+.. .. ....|++..|. ++||++++++++ .+|..++++++|++|+|
T Consensus 21 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~~t~G 99 (391)
T 3bwn_A 21 SDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIVVGTG 99 (391)
T ss_dssp TTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEEEEEH
T ss_pred CCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEeCC
Confidence 4478999999999877777766653322 11 34679999998 999999999998 67888877448999999
Q ss_pred hHHHHHHHHHHccCCCC----eEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCC
Q 013883 179 CTEAIAATILGLINPGD----EVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNP 254 (434)
Q Consensus 179 ~~~ai~~~~~~l~~~gd----~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NP 254 (434)
+++++.+++.+++++|| +|++++|+|..|...++..|++++.++++.+++ + .+++++|++++||||
T Consensus 100 ~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l--~--------~~~~k~v~l~~p~NP 169 (391)
T 3bwn_A 100 STQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAWGF--D--------KKGPYIELVTSPNNP 169 (391)
T ss_dssp HHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEESTTC--C--------CCSCEEEEEESSCTT
T ss_pred hHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHHHc--C--------CCCCEEEEECCCCCC
Confidence 99999999999999999 999999999999999999999999888875332 1 257899999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEe-ChhhH
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLT 333 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~-~~~~~ 333 (434)
||.+++ +|++.+++++++||+||+|.. +....+. ...+++++++||||.+|++|+|+||+++ +++++
T Consensus 170 tG~~~~-----~l~~~~~~~~~~ii~De~y~~----~~~~~l~---~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~ 237 (391)
T 3bwn_A 170 DGTIRE-----TVVNRPDDDEAKVIHDFAYYW----PHYTPIT---RRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVA 237 (391)
T ss_dssp TCCCCC-----CCC-----CCCEEEEECTTCS----TTTSCCC---CCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHH
T ss_pred CchhHH-----HHHHHhhcCCCEEEEeCCCCC----CCCCccc---cCCCCeEEEEechhhcCCCccceEEEEecCHHHH
Confidence 999996 344422223399999999973 2222222 2457899999999999999999999997 89999
Q ss_pred HHHHHHhhccccCCchHHHHHHHHHHhCC----------hHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecC--------
Q 013883 334 WGVRQAHSFLTFATSTPMQWAATAALRAP----------ETYYEELKRDYSAKKAILVEGLNAV-GFKVFPS-------- 394 (434)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~q~a~~~~L~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-------- 394 (434)
+.+...+....++++.+.|.++..+|++. +++++++++.++++++.+.+.|++. |+.+..+
T Consensus 238 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~ 317 (391)
T 3bwn_A 238 KKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYF 317 (391)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTT
T ss_pred HHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccc
Confidence 99988887667889999999999999863 4578999999999999999999987 6666543
Q ss_pred -----CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 395 -----SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 395 -----~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
++|+|+|+++.. . +++..+++++||.+.||+.|+
T Consensus 318 ~~~~~~~g~~~~~~~~~-----~-~~~~~~l~~~gV~v~pg~~fg 356 (391)
T 3bwn_A 318 GKSLESYPAFAWLGTKE-----E-TDLVSELRRHKVMSRAGERCG 356 (391)
T ss_dssp TEEECCCCSEEEEEESS-----S-CCHHHHHHHTTEECEEGGGGT
T ss_pred cccCCCcceEEEecCCc-----H-HHHHHHHHHCCEEEccCCCCC
Confidence 445689998742 1 244555677899999998873
No 77
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=4.9e-39 Score=314.14 Aligned_cols=295 Identities=18% Similarity=0.247 Sum_probs=245.6
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
.+.|||+.|.+.+++++.+.+++.+++ .....|++..+ .+||++++++++ ++++ +|++|+|+++++.+++.
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~-~~~~~y~~~~~-~~lr~~la~~~~------~~~~-~i~~t~g~~~al~~~~~ 85 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENL-NCIRHYPEPDA-GTLRQMLAKRNS------VDNN-AILVTNGPTAAFYQIAQ 85 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTG-GGGGSCCCTTC-HHHHHHHHHHTT------CCGG-GEEEESHHHHHHHHHHH
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhH-hHHhcCCCCcH-HHHHHHHHHHhC------cCHH-HEEEcCCHHHHHHHHHH
Confidence 478999999999999999999998887 44567888777 899999999885 6677 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEc-CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITL-RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
++. ||+|++++|+|..+...++..|++++.++. ++ +.++++ +++++|++++||||||.+++.+++++|
T Consensus 86 ~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~--------~~~~~v~i~~p~nptG~~~~~~~l~~l 154 (350)
T 3fkd_A 86 AFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNED-IGEADF--------SNMDFCWLCNPNNPDGRLLQRTEILRL 154 (350)
T ss_dssp HTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSC-GGGSCC--------TTCSEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCc-cccCcc--------CCCCEEEEeCCCCCcCCCCCHHHHHHH
Confidence 988 999999999999999999999999999998 54 223333 578999999999999999999999999
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~ 347 (434)
+++|+++ ++|+||+|.++.+++.... ..+ ...++++++.||||.+|++|+|+||+++++++++.++.... .++.
T Consensus 155 ~~~~~~~--~li~Dea~~~~~~~~~~~~-~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~--~~~~ 228 (350)
T 3fkd_A 155 LNDHPDT--TFVLDQSYVSFTTEEVIRP-ADI-KGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFST--PWAV 228 (350)
T ss_dssp HHHCTTS--EEEEECTTTTSCSSCCCCG-GGG-TTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCC--TTCS
T ss_pred HHhCCCC--EEEEECchhhhccCcchhh-HHh-hcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCC--CCCC
Confidence 8888765 9999999999887654322 222 34678999999999999999999999999999988876653 5788
Q ss_pred chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 348 STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
+.+.|.++..+|++.+++.+.+++.+ ++++.+.+.|+++ |+.+.++.++ |+|+.++.. +..+++++|++++||.
T Consensus 229 ~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~~---~~~~l~~~L~~~~gi~ 303 (350)
T 3fkd_A 229 NALAIEAAKFILIHPAQFTLPIRKWQ-RNTVDFITALNRLDGVEVHPSGTT-FFLLRLKKG---TAAELKKYMLEEYNML 303 (350)
T ss_dssp CHHHHHHHHHHHHCTTTTCCCHHHHH-HHHHHHHHHHHHSTTEEECCCSSS-EEEEEESSS---CHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHhCHHHHHHHHHHHH-HHHHHHHHHHhcCCCcEECCCCCc-EEEEECCCC---CHHHHHHHHHHHCCEE
Confidence 99999999999998654555555544 8889999999987 8888777666 456766432 5788999998757999
Q ss_pred EECCCCCC
Q 013883 427 AIPTSVFY 434 (434)
Q Consensus 427 v~pG~~F~ 434 (434)
+.||+.|+
T Consensus 304 v~~g~~f~ 311 (350)
T 3fkd_A 304 IRDASNFR 311 (350)
T ss_dssp CEECTTST
T ss_pred EEeCccCC
Confidence 99998873
No 78
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=4.4e-38 Score=305.39 Aligned_cols=293 Identities=19% Similarity=0.262 Sum_probs=241.6
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
..+.|+|+.+.+.+++++.+.+++.+.+.. ...|+ ..|..+||++++++++ ++++ +|++|+|+++++.+++
T Consensus 15 ~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~~y~-~~~~~~lr~~la~~~~------~~~~-~i~~t~G~~~~l~~~~ 85 (337)
T 3p1t_A 15 AAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYP-FDAEPRVMRKLAEHFS------CPED-NLMLVRGIDECFDRIS 85 (337)
T ss_dssp CCCCEECSSCCCCSCCCHHHHHHHHHHGGG-TTSCC-TTHHHHHHHHHHHHHT------SCGG-GEEEESHHHHHHHHHH
T ss_pred CCCceEeeCCCCCCCCCHHHHHHHHHhhhh-hccCC-CCchHHHHHHHHHHhC------cCHH-HEEEeCCHHHHHHHHH
Confidence 346899999988889999999999887754 56785 4688999999999986 5666 8999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
..+ +||+|++++|+|.++...++..|++++.++.++ ++++|++.++++ .+++++++++||||||.+++.+++.+|
T Consensus 86 ~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~l~~l 160 (337)
T 3p1t_A 86 AEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD-DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQL 160 (337)
T ss_dssp HHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCT-TSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred Hhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCC-CCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 988 999999999999999999999999999999875 688999999886 468999999999999999998875555
Q ss_pred HHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC
Q 013883 268 ASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 347 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~ 347 (434)
|+++++ +|+||+|.+|.+.+.. .....++++++.||||.+|++|+|+||+++++++++.++... ..++.
T Consensus 161 ---~~~~~~-~ivDea~~~~~~~~~~-----~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~--~~~~~ 229 (337)
T 3p1t_A 161 ---RQRAGK-LLIDETYVDYSSFRAR-----GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ--WFCNV 229 (337)
T ss_dssp ---HHHCSE-EEEECTTGGGSSCSSS-----CCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTS--CTTCS
T ss_pred ---HHhCCc-EEEECCChhhcccccc-----ccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhc--CCCCC
Confidence 667786 5669999987644321 112357889999999999999999999999999998886653 35778
Q ss_pred chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEE
Q 013883 348 STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 348 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v 427 (434)
+.+.|.++..+|++ .+++++.++++.++++.+.+.|+++|+.+.+++++|++|. .. +..++.+.| +++||.+
T Consensus 230 ~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~-~~-----~~~~~~~~l-~~~gi~v 301 (337)
T 3p1t_A 230 GTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVE-NA-----AGERTLRFL-RERGIQV 301 (337)
T ss_dssp CHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSEEEEE-CT-----TTHHHHHHH-HHTTEEC
T ss_pred CHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCcCEECCCCCeEEEEE-cC-----CHHHHHHHH-HHCCeEE
Confidence 88999999999987 3455666777888899999999999999888888866554 32 234555555 5669999
Q ss_pred ECCCCC
Q 013883 428 IPTSVF 433 (434)
Q Consensus 428 ~pG~~F 433 (434)
.||+.|
T Consensus 302 ~~g~~~ 307 (337)
T 3p1t_A 302 KDAGQF 307 (337)
T ss_dssp EEGGGG
T ss_pred EECccC
Confidence 999876
No 79
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=1.1e-37 Score=306.00 Aligned_cols=296 Identities=22% Similarity=0.343 Sum_probs=247.1
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDG---KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
.+.|+|+.|.|++++++.+.+++.+++.+. ...|++. +..+||++++++++ ++++ +|++|+|+++++..
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~g------~~~~-~i~~t~g~~~al~~ 97 (360)
T 3hdo_A 26 ASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELYG------FDPS-WIIMANGSDEVLNN 97 (360)
T ss_dssp TTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHHT------CCGG-GEEEESSHHHHHHH
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHhC------cCcc-eEEEcCCHHHHHHH
Confidence 368999999999999999999999998775 5678765 56899999999985 6677 89999999999999
Q ss_pred HHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHH
Q 013883 186 TILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 186 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
++.+++++||+|++++|+|.++...++..|++++.++.++ ++.+ +.+++.+ +++++++++|+||||.+++.++
T Consensus 98 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~~~~~-- 170 (360)
T 3hdo_A 98 LIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG-DFRI--AGFPERY--EGKVFFLTTPNAPLGPSFPLEY-- 170 (360)
T ss_dssp HHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT-TSSB--TTCCSSB--CSSEEEEESSCTTTCCCCCHHH--
T ss_pred HHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC-CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCcCHHH--
Confidence 9999999999999999999999999999999999999874 4444 4444433 4679999999999999998876
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTF 345 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~ 345 (434)
|.++|+++|+++|+||+|.+|. +. ....+....++++++.||||.+|++|+|+||+++++++++.++.... .+
T Consensus 171 -l~~l~~~~~~~li~De~~~~~~--~~--~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~--~~ 243 (360)
T 3hdo_A 171 -IDELARRCAGMLVLDETYAEFA--ES--NALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRD--HY 243 (360)
T ss_dssp -HHHHHHHBSSEEEEECTTGGGS--SC--CCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSC--SC
T ss_pred -HHHHHHHCCCEEEEECChHhhC--Cc--chhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhCC--CC
Confidence 5556788999999999999863 22 11112223578899999999999999999999999999998887653 57
Q ss_pred CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCe
Q 013883 346 ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGV 425 (434)
Q Consensus 346 ~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV 425 (434)
+.+.+.+.++..+|++ .+++++.+++++++++.+.+.|++.|+.+.++.++ |+|+.+. + .+..++.++|.+ +||
T Consensus 244 ~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~--~-~~~~~l~~~l~~-~gi 317 (360)
T 3hdo_A 244 NLDRLAQAACVAALRD-QAYLSECCRRIRETREWFTTELRSIGYDVIPSQGN-YLFATPP--D-RDGKRVYDGLYA-RKV 317 (360)
T ss_dssp CSCHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCSSS-EEEEECT--T-CCHHHHHHHHHH-TTE
T ss_pred CCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEcCCCcc-EEEEECC--C-CCHHHHHHHHHH-CCE
Confidence 8899999999999997 67889999999999999999999999998777666 4566653 2 257788888765 599
Q ss_pred EEECCCC
Q 013883 426 VAIPTSV 432 (434)
Q Consensus 426 ~v~pG~~ 432 (434)
.+.||..
T Consensus 318 ~v~~~~~ 324 (360)
T 3hdo_A 318 LVRHFSD 324 (360)
T ss_dssp ECBCCCS
T ss_pred EEEECCC
Confidence 9999763
No 80
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=9.3e-38 Score=303.45 Aligned_cols=291 Identities=24% Similarity=0.316 Sum_probs=241.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHH-cCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIR-DGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
+.|+|+.|.+++++++.+.+++.+++. .....|+.. +..++|+++++++++. .++++ +|++++|+++++..+++
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-~~~~lr~~la~~~~~~---~~~~~-~v~~~~G~~~al~~~~~ 94 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDS-PDEELIEKILSYLDTD---FLSKN-NVSVGNGADEIIYVMML 94 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCS-SCHHHHHHHHHHHTCS---SCCGG-GEEEESSHHHHHHHHHH
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC-chHHHHHHHHHHcCCC---CCCHH-HEEEcCChHHHHHHHHH
Confidence 679999998888888999999988773 334668654 6899999999999744 45666 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
++ ||+|+++ |+|+++...++..|++++.+|+++ ++.+|++.+ +++++|++++||||||.+++.+++++|+
T Consensus 95 ~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~l~~l~ 164 (335)
T 1uu1_A 95 MF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTK-DLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREEIERIL 164 (335)
T ss_dssp HS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCCT-TSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred Hh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCC-CCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 88 8999999 999999999999999999998864 577888776 5789999999999999999999988888
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCc
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 348 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~ 348 (434)
++| | ++|+||+|.++.++ +...+.+..++++++.||||.+|++|+|+||+++++++++.++.... .++.+
T Consensus 165 ~~~---~-~li~De~~~~~~~~----~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~--~~~~~ 234 (335)
T 1uu1_A 165 KTG---A-FVALDEAYYEFHGE----SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRL--PFNVS 234 (335)
T ss_dssp HTT---C-EEEEECTTHHHHCC----CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSC--TTCSC
T ss_pred HhC---C-EEEEECcchhhcch----hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcC--CCCcC
Confidence 877 7 89999999987542 11222223568899999999999999999999999999988877653 46889
Q ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 349 TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 349 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
.+.|.++..+|++ .+++++.+++++++++.+.+.|++.|+.+.++. ++|+|++++. .+..+++++|++ +||.+.
T Consensus 235 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~---~~~~~~~~~l~~-~gi~v~ 308 (335)
T 1uu1_A 235 YVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMGYRITDSR-GNFVFVFMEK---EEKERLLEHLRT-KNVAVR 308 (335)
T ss_dssp HHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCC-SSEEEEECCT---HHHHHHHHHHHH-HTEEEE
T ss_pred HHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCcEEcCCC-CeEEEEECCC---CCHHHHHHHHHH-CCEEEE
Confidence 9999999999997 567888999999999999999988888765554 5578888742 246678888875 599998
Q ss_pred CCC
Q 013883 429 PTS 431 (434)
Q Consensus 429 pG~ 431 (434)
|+.
T Consensus 309 ~~~ 311 (335)
T 1uu1_A 309 SFR 311 (335)
T ss_dssp EET
T ss_pred ECC
Confidence 743
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=4.7e-39 Score=323.06 Aligned_cols=296 Identities=14% Similarity=0.116 Sum_probs=247.5
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHH-cCCCC--CCCCC-C---cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIR-DGKNQ--YARGH-G---VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~-~~~~~--Y~~~~-G---~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
..|+|+.|.|++++++++.+++.+++. .+... |++.. | .++||+++++++++..+..++++ +|++|+|++++
T Consensus 57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~-~iv~t~G~~~a 135 (427)
T 2hox_A 57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDR-YIVFGVGVTQL 135 (427)
T ss_dssp CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTC-EEEEESHHHHH
T ss_pred ceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCC-EEEEeCCHHHH
Confidence 679999999998888888888887763 33333 99888 9 99999999999998777777888 89999999999
Q ss_pred HHHHHHHc--------cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCC
Q 013883 183 IAATILGL--------INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNP 254 (434)
Q Consensus 183 i~~~~~~l--------~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NP 254 (434)
+.+++.++ +++||+|+++.|+|..+...++..|++++.+ .+|++.|++++++++++|++++||||
T Consensus 136 l~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~-------~~d~~~l~~~~~~~~k~v~l~~p~NP 208 (427)
T 2hox_A 136 IHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW-------AGNAANYVNVSNPEQYIEMVTSPNNP 208 (427)
T ss_dssp HHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE-------EEEGGGGTTCSCGGGEEEEEESSCTT
T ss_pred HHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee-------cCCHHHHHHhhcCCceEEEEcCCCCC
Confidence 99999999 9999999999999999999999999987643 35678898888888999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEe-ChhhH
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLT 333 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~-~~~~~ 333 (434)
||.+++ +. ++ ++..|+|++|.+ ...++..+. .+++++++||||.+|++|+|+||+++ +++++
T Consensus 209 tG~~~~-~~-------l~--~~~~i~d~~~~~-----~~~s~~~~~--~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~ 271 (427)
T 2hox_A 209 EGLLRH-AV-------IK--GCKSIYDMVYYW-----PHYTPIKYK--ADEDILLFTMSKFTGHSGSRFGWALIKDESVY 271 (427)
T ss_dssp TCCCCC-CS-------ST--TCEEEEECTTCS-----TTTSCCCSC--BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHH
T ss_pred cccccH-HH-------Hc--CCCEEEeecccC-----CCCCccccC--CCceEEEEeChhcCCCCCceEEEEEECCHHHH
Confidence 999999 42 22 567888887742 233444443 57899999999999999999999999 58999
Q ss_pred HHHHHHhhccccCCchHHHHHHHHHHhCC-----------hHHHHHHHHHHHHHHHHHHHHhhhC-CCEe----------
Q 013883 334 WGVRQAHSFLTFATSTPMQWAATAALRAP-----------ETYYEELKRDYSAKKAILVEGLNAV-GFKV---------- 391 (434)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~q~a~~~~L~~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---------- 391 (434)
++++..+.....+++.+.|.++..+|++. +++++++++.++++++.+.+.|++. |+.+
T Consensus 272 ~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 351 (427)
T 2hox_A 272 NNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCN 351 (427)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEET
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccc
Confidence 99998887777889999999999999863 3466778899999999999999987 6554
Q ss_pred ----ecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCCC
Q 013883 392 ----FPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFY 434 (434)
Q Consensus 392 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F~ 434 (434)
..+++++|+|+++.. +..+++++|++++||.++||+.|+
T Consensus 352 ~~~~~~p~~g~f~~~~~~~----~~~~~~~~ll~~~gI~v~pg~~f~ 394 (427)
T 2hox_A 352 YFRRMRPPSPSYAWVKCEW----EEDKDCYQTFQNGRINTQNGVGFE 394 (427)
T ss_dssp TTTEEECCCCSEEEEEECS----GGGCSHHHHHHHTTEECEEGGGGT
T ss_pred cccccCCCCceEEEEECCC----cHHHHHHHHHHHCCEEEcCCCccC
Confidence 356679999999853 355688888877899999998773
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=9.1e-36 Score=296.09 Aligned_cols=302 Identities=15% Similarity=0.128 Sum_probs=244.5
Q ss_pred CeeEeCCCCC-CCCCcHHHHHHHHHHHHcCC---CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 110 GAINLGQGFP-NFDGPDFVKDAAIQAIRDGK---NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 110 ~~i~l~~g~p-~~~~~~~v~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
+.|||+.|.| ++++++.+.+++.+++.+.. ..|.+..|..++++++++++.+.+|. + ++++++|+++++..
T Consensus 44 ~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~v~~~~ggt~a~~~ 118 (398)
T 3a2b_A 44 RVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK----E-AAILFSTGFQSNLG 118 (398)
T ss_dssp EEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC----S-EEEEESSHHHHHHH
T ss_pred eEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC----C-cEEEECCHHHHHHH
Confidence 5799999987 77688899999988876532 34566778889999999999888774 4 79999999999999
Q ss_pred HHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc----CCcEEEecCCCCCcccCCCH
Q 013883 186 TILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK----NTRAILMNTPHNPTGKMFTR 261 (434)
Q Consensus 186 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----~~~~i~~~~p~NPTG~~~~~ 261 (434)
++.+++++||.|++++|+|..+...+...|++++.+|. +|++.+++++++ ++++|++++|+||||.+++
T Consensus 119 ~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~- 191 (398)
T 3a2b_A 119 PLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN- 191 (398)
T ss_dssp HHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC-
T ss_pred HHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC------CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC-
Confidence 99999999999999999999999999999999999886 479999999876 7899999999999999986
Q ss_pred HHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCc-eEEEccCChhhccccceeeeEEeChhhHHHHHHH-
Q 013883 262 EELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYER-TVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA- 339 (434)
Q Consensus 262 e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~-~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~- 339 (434)
+++|+++|++||+++|+||+|..+.++.....+....+..++ ++++.||||.++++| ||+++++++++.++..
T Consensus 192 --~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~ 266 (398)
T 3a2b_A 192 --LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDFLKHNA 266 (398)
T ss_dssp --HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHHHHHHC
T ss_pred --HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCHHHHHHHHHhc
Confidence 677999999999999999999988765323333222122345 699999999999778 9999999999888774
Q ss_pred hhccccCCchHHHH-HHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHH
Q 013883 340 HSFLTFATSTPMQW-AATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEY 418 (434)
Q Consensus 340 ~~~~~~~~~~~~q~-a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (434)
......+.+.+.|. ++..+|+. .+++++++++++++++.+.+.|++.|+++.++.+ +++|+.+.. + .+..+++++
T Consensus 267 ~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g-~~~~~~~~~-~-~~~~~l~~~ 342 (398)
T 3a2b_A 267 RSVMFSASMTPASVASTLKALEI-IQNEPEHIEKLWKNTDYAKAQLLDHGFDLGATES-PILPIFIRS-N-EKTFWVTKM 342 (398)
T ss_dssp HHHHSSBCCCHHHHHHHHHHHHH-HHHCTHHHHHHHHHHHHHHHHHHHTTCCBCSCCS-SEEEEECCC-H-HHHHHHHHH
T ss_pred ccceecCCCCHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHhcCCCcCCCCC-CEEEEEcCC-H-HHHHHHHHH
Confidence 33344455666666 45577775 3456678899999999999999999988877765 577777632 1 135678888
Q ss_pred HHHhcCeEEECCCCC
Q 013883 419 LIKEVGVVAIPTSVF 433 (434)
Q Consensus 419 Ll~~~GV~v~pG~~F 433 (434)
|+++ ||.+.||..|
T Consensus 343 l~~~-gi~v~~~~~~ 356 (398)
T 3a2b_A 343 LQDD-GVFVNPVVSP 356 (398)
T ss_dssp HHHT-TEECEEECTT
T ss_pred HHHC-CcEEEeeCCC
Confidence 8877 9999999876
No 83
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=2.7e-32 Score=269.58 Aligned_cols=297 Identities=11% Similarity=0.074 Sum_probs=227.9
Q ss_pred CeeEeCCCCC-CCCCcHHHHHHHHHHHHc-CC----CCC--CCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQGFP-NFDGPDFVKDAAIQAIRD-GK----NQY--ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g~p-~~~~~~~v~~~~~~~~~~-~~----~~Y--~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
..|||+.|.+ ++++++.+.+++.+++.+ +. ..| ....+..+||++++++++ ++ + .|++++| ++
T Consensus 40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~-~-~i~~~sG-t~ 110 (384)
T 1bs0_A 40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG------YS-R-ALLFISG-FA 110 (384)
T ss_dssp EEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT------CS-E-EEEESCH-HH
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC------CC-c-EEEeCCc-HH
Confidence 5799999864 666788899999888765 21 223 334567789999998885 22 3 5666666 89
Q ss_pred HHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccC---CcEEEecCCCCCcccC
Q 013883 182 AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKN---TRAILMNTPHNPTGKM 258 (434)
Q Consensus 182 ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~---~~~i~~~~p~NPTG~~ 258 (434)
++..++.+++++||.|+++.|+|..+...+...|++++.+|. .|++.+++++++. +++|++++||||||.+
T Consensus 111 a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~ 184 (384)
T 1bs0_A 111 ANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH------NDVTHLARLLASPCPGQQMVVTEGVFSMDGDS 184 (384)
T ss_dssp HHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT------TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCB
T ss_pred HHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC------CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCc
Confidence 999999999999999999999999999999999999998874 3789999988753 7788889999999999
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccc-cCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHH
Q 013883 259 FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISI-ASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVR 337 (434)
Q Consensus 259 ~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~ 337 (434)
++ +++|+++|++||+++|+||+|..+.++.....+ ..+. . +..+++.||||.+|++| ||+++++++++.++
T Consensus 185 ~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~-~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~ 256 (384)
T 1bs0_A 185 AP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQK-V-KPELLVVTFGKGFGVSG---AAVLCSSTVADYLL 256 (384)
T ss_dssp CC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTT-C-CCSEEEEESSSTTSSCC---EEEEECHHHHHHHH
T ss_pred cC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcC-C-CCcEEEeeccchhhccC---cEEEeCHHHHHHHH
Confidence 97 677999999999999999999876553111111 1121 1 23488999999999766 99999999988887
Q ss_pred HHhhc--cccCCchHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHH
Q 013883 338 QAHSF--LTFATSTPMQWAATAALRAPET-YYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIA 414 (434)
Q Consensus 338 ~~~~~--~~~~~~~~~q~a~~~~L~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (434)
..... .+.+.+.+.+.++..+|+..++ +.++.+++++++++.+.+.|+++|+++.++.++ ++|+.+.. + .+..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~-~-~~~~~ 333 (384)
T 1bs0_A 257 QFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSA-IQPLIVGD-N-SRALQ 333 (384)
T ss_dssp HHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECSCCSS-BCCEEEES-H-HHHHH
T ss_pred HhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCCcccCCCCC-EEEEEeCC-H-HHHHH
Confidence 64321 2335778888888888875332 667888999999999999999999888765444 55666531 1 13567
Q ss_pred HHHHHHHhcCeEEECCCCC
Q 013883 415 FCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 415 ~~~~Ll~~~GV~v~pG~~F 433 (434)
++++|+++ ||.+.||..|
T Consensus 334 l~~~l~~~-gi~v~~~~~~ 351 (384)
T 1bs0_A 334 LAEKLRQQ-GCWVTAIRPP 351 (384)
T ss_dssp HHHHHHHT-TEECCEECTT
T ss_pred HHHHHHHC-CcEEEeecCC
Confidence 88888766 9999998755
No 84
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.9e-32 Score=273.39 Aligned_cols=299 Identities=15% Similarity=0.170 Sum_probs=230.4
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC-------CCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG-------KNQYAR--GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-------~~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
+.|+|+.|.++ +.++.+.+++.+++.+. ...|++ ..+..+++++++++++. . +++ +|++++|++
T Consensus 28 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~----~-~~~-~v~~~~g~t 100 (420)
T 1t3i_A 28 PLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINA----R-SPR-EIVYTRNAT 100 (420)
T ss_dssp ECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTC----S-CGG-GEEEESSHH
T ss_pred ceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCC----C-CCC-eEEEcCChH
Confidence 37999999887 67788999998888652 123433 34667888888888761 1 456 899999999
Q ss_pred HHHHHHHHHc----cCCCCeEEEcCCCchh----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCC
Q 013883 181 EAIAATILGL----INPGDEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPH 252 (434)
Q Consensus 181 ~ai~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~ 252 (434)
+++.+++.++ +++||+|++++|+|++ +...+...|++++.++.++ ++.+|++.+++++++++++|++++|+
T Consensus 101 ~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~ 179 (420)
T 1t3i_A 101 EAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE-QESFDLEHFKTLLSEKTKLVTVVHIS 179 (420)
T ss_dssp HHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT-TSSBCHHHHHHHCCTTEEEEEEESBC
T ss_pred HHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCC-CCCcCHHHHHHhhCCCceEEEEeCCc
Confidence 9999999999 8999999999999998 6677788999999999873 67799999999999899999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhh
Q 013883 253 NPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL 332 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~ 332 (434)
||||.+++ +++|.++|++||+++|+||+|..+... ..+.. .+.++++.|+||.+|.+| +||+++++++
T Consensus 180 nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~---~~~~~----~~~di~~~s~sK~~~~~g--~G~~~~~~~~ 247 (420)
T 1t3i_A 180 NTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP---LDVQL----IDCDWLVASGHKMCAPTG--IGFLYGKEEI 247 (420)
T ss_dssp TTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---CCHHH----HTCSEEEEEGGGTTSCTT--CEEEEECHHH
T ss_pred ccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc---Cchhh----cCCCEEEEehhhhcCCCc--eEEEEEchHH
Confidence 99999997 677999999999999999999864321 11111 135689999999988777 9999999988
Q ss_pred HHHHHHHhhc--------------------cccCCchHHHHHHHH-HHhCCh-HHHHHHHHHHHHHHHHHHHHhhhC-CC
Q 013883 333 TWGVRQAHSF--------------------LTFATSTPMQWAATA-ALRAPE-TYYEELKRDYSAKKAILVEGLNAV-GF 389 (434)
Q Consensus 333 ~~~l~~~~~~--------------------~~~~~~~~~q~a~~~-~L~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~ 389 (434)
++.++..... ...+.+.+.+.++.. +|+... .++++++++++++++.+.+.|++. |+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 327 (420)
T 1t3i_A 248 LEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQL 327 (420)
T ss_dssp HHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred HhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 8776543321 113455666665544 454322 246778889999999999999987 88
Q ss_pred EeecCC------eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 390 KVFPSS------GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 390 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
++..+. ++++.| .+.. .+..++++.| +++||.+.||..|
T Consensus 328 ~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~l-~~~gi~v~~~~~~ 372 (420)
T 1t3i_A 328 RLYGPNPKHGDRAALASF-NVAG---LHASDVATMV-DQDGIAIRSGHHC 372 (420)
T ss_dssp EEESCCGGGSCBCSEEEE-EETT---BCHHHHHHHH-HTTTEECBCSCTT
T ss_pred EEeCCCccccccCCEEEE-EECC---CCHHHHHHHH-HHCCeEEeecccc
Confidence 887664 676655 4532 2466777666 5569999999644
No 85
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=3.5e-32 Score=268.08 Aligned_cols=297 Identities=16% Similarity=0.157 Sum_probs=223.5
Q ss_pred eEeCCCCCCCCCcHHHHHHHHHHHHcCC--CC------CCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 112 INLGQGFPNFDGPDFVKDAAIQAIRDGK--NQ------YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 112 i~l~~g~p~~~~~~~v~~~~~~~~~~~~--~~------Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+.|..+... ++++.+.+++.+++.+.. .. |.+..+..+|+++++++++ ++++ +|++++|+++++
T Consensus 3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~-~v~~~~g~t~a~ 74 (384)
T 1eg5_A 3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLG------VSPS-EIFFTSCATESI 74 (384)
T ss_dssp EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT------SCGG-GEEEESCHHHHH
T ss_pred EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcC------CCCC-eEEEECCHHHHH
Confidence 345555444 667889999988887521 00 1122345788888888885 5566 899999999999
Q ss_pred HHHHHHcc----CCCCeEEEcCCCchhHHHHH---HHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcc
Q 013883 184 AATILGLI----NPGDEVILFAPFYDSYEATL---SMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTG 256 (434)
Q Consensus 184 ~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG 256 (434)
..++.++. ++||+|++++|+|+++...+ ...|++++.++.++ ++.+|++.+++++++++++|++++|+||||
T Consensus 75 ~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~nptG 153 (384)
T 1eg5_A 75 NWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS-RGVVKLEELEKLVDEDTFLVSIMAANNEVG 153 (384)
T ss_dssp HHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT-TSCBCHHHHHHHCCTTEEEEEEESBCTTTC
T ss_pred HHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC-CCccCHHHHHHHhCCCCeEEEEECCCCCcc
Confidence 99999997 79999999999999886655 77899999999874 678999999999998999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcC--cEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhh--
Q 013883 257 KMFTREELNVIASLCIEND--VLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL-- 332 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~--~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~-- 332 (434)
.+++ +++|.++|++|| +++|+||+|.. +.....+ .. .+.++++.|+||.+|++| +||+++++++
T Consensus 154 ~~~~---~~~i~~l~~~~~~~~~li~Dea~~~---~~~~~~~---~~-~~~di~~~s~sK~~g~~G--~G~~~~~~~~~~ 221 (384)
T 1eg5_A 154 TIQP---VEDVTRIVKKKNKETLVHVDAVQTI---GKIPFSL---EK-LEVDYASFSAHKFHGPKG--VGITYIRKGVPI 221 (384)
T ss_dssp BBCC---HHHHHHHHHHHCTTCEEEEECTTTT---TTSCCCC---TT-TCCSEEEEEGGGGTSCTT--CEEEEECTTSCC
T ss_pred cccC---HHHHHHHHHhcCCceEEEEEhhhhc---CCcccCc---hh-cCCCEEEecHHHhcCCCc--eEEEEEcCCCcc
Confidence 9998 567889999999 99999999972 2222222 21 246789999999999878 8999999875
Q ss_pred HHHHHHH---hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCC-e--eEEEeeecCC
Q 013883 333 TWGVRQA---HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSS-G--TYFVVVDHTP 406 (434)
Q Consensus 333 ~~~l~~~---~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~--~~~~~~~~~~ 406 (434)
...+... .....++.+.+.+.++..+|+...+++++++++++++++.+.+.|++.|+++..+. + +.++++.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~- 300 (384)
T 1eg5_A 222 RPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFP- 300 (384)
T ss_dssp CCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECT-
T ss_pred ccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEEEEeC-
Confidence 2111110 11235677888898888888864457788899999999999999998888886542 2 223444443
Q ss_pred CCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 407 FGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 407 ~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+. +..+++++|. ++||.+.||..|
T Consensus 301 -~~-~~~~~~~~l~-~~gi~v~~g~~~ 324 (384)
T 1eg5_A 301 -NI-RGSTLQNLLS-GYGIYVSTSSAC 324 (384)
T ss_dssp -TC-CHHHHHHHHH-HTTEECBC----
T ss_pred -CC-CHHHHHHHHh-hCCeEEeccccc
Confidence 22 5778888875 569999999766
No 86
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=3.4e-32 Score=271.22 Aligned_cols=284 Identities=20% Similarity=0.207 Sum_probs=218.2
Q ss_pred eEeCCCCCCCCCcHHHHHHHHHHHH-----cCCCCCCCCCCcH---HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 112 INLGQGFPNFDGPDFVKDAAIQAIR-----DGKNQYARGHGVP---EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 112 i~l~~g~p~~~~~~~v~~~~~~~~~-----~~~~~Y~~~~G~~---~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
.+++++.|+++.++.+.+++.++++ ...+.|+. .|.+ +|+++++++++ .+ ++++++|+++++
T Consensus 21 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g--------~~-~~i~~~~g~~ai 90 (404)
T 1e5e_A 21 QFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK--------TE-ACVATSSGMGAI 90 (404)
T ss_dssp TTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT--------CS-EEEEESSHHHHH
T ss_pred CCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC--------CC-cEEEeCChHHHH
Confidence 4688899999998888777766654 23466877 5666 89999999885 23 577777778999
Q ss_pred HHHHHHccCCCCeEEEcCCCchhHHH----HHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCC
Q 013883 184 AATILGLINPGDEVILFAPFYDSYEA----TLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMF 259 (434)
Q Consensus 184 ~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~ 259 (434)
..++.+++++||+|++++|.|+.+.. .++..|++++.++.+ |++.+++++++++++|++++|+||||.++
T Consensus 91 ~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~i~~~t~~v~l~~p~NptG~v~ 164 (404)
T 1e5e_A 91 AATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA------IPGEVKKHMKPNTKIVYFETPANPTLKII 164 (404)
T ss_dssp HHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT------STTHHHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred HHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC------CHHHHHHhcCCCCcEEEEECCCCCCCccc
Confidence 99999999999999999999999888 788899999999875 78899999998999999999999999999
Q ss_pred CHHHHHHHHHHHHH-cCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccccee-eeEEeChhhHH-HH
Q 013883 260 TREELNVIASLCIE-NDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKI-GWAIAPPHLTW-GV 336 (434)
Q Consensus 260 ~~e~l~~i~~la~~-~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~-G~~~~~~~~~~-~l 336 (434)
+ +++|+++|++ +|+++|+||+|..+.+.. .+ . .++++++.|+||.++++|+|+ ||+++++++++ .+
T Consensus 165 ~---l~~i~~la~~~~~~~li~De~~~~~~~~~---~~-~----~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l 233 (404)
T 1e5e_A 165 D---MERVCKDAHSQEGVLVIADNTFCSPMITN---PV-D----FGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIR 233 (404)
T ss_dssp C---HHHHHHHHHTSTTCEEEEECTTTCTTTCC---GG-G----GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHH
T ss_pred C---HHHHHHHHHhhcCCEEEEECCCchhhhCC---cc-c----cCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHH
Confidence 5 7889999999 999999999999876531 11 1 357899999999999999998 99999999887 77
Q ss_pred HHHhhcc-ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC---------------CCEeecC----Ce
Q 013883 337 RQAHSFL-TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV---------------GFKVFPS----SG 396 (434)
Q Consensus 337 ~~~~~~~-~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------------g~~~~~~----~~ 396 (434)
+...... ..+.+.+.+.++..+|+... ...++..++.+.+.+.|++. |+++.++ .+
T Consensus 234 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g 309 (404)
T 1e5e_A 234 MVGIKDITGSVISPHDAWLITRGLSTLN----IRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYG 309 (404)
T ss_dssp HTCCCCCCCCCCCHHHHHHHHHHHTTHH----HHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCC
T ss_pred HHHHHhCCCCCCCHHHHHHHHHhHhHHH----HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCc
Confidence 7665544 45678888999888898632 22333344444444444433 2233333 38
Q ss_pred eEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 397 TYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+|+.| ++.. ..+.+.+++++.|| +.+|..|
T Consensus 310 ~~~~~-~~~~-----~~~~~~~~l~~~~i-~~~~~s~ 339 (404)
T 1e5e_A 310 SMITF-ILKS-----GFEGAKKLLDNLKL-ITLAVSL 339 (404)
T ss_dssp SEEEE-EETT-----HHHHHHHHHHTCSS-SEESSCC
T ss_pred eEEEE-EeCC-----CHHHHHHHHHhCCC-ceeccCC
Confidence 88887 6632 33456667788899 5665433
No 87
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=2.5e-32 Score=270.83 Aligned_cols=298 Identities=13% Similarity=0.146 Sum_probs=226.4
Q ss_pred CeeEeCCCCC-CCCCcHHHHHHHHHHHHcCCC-----CC--CCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQGFP-NFDGPDFVKDAAIQAIRDGKN-----QY--ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g~p-~~~~~~~v~~~~~~~~~~~~~-----~Y--~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
..|||+.|.| ++.+++.+.+++.+++.+... .| ....+..+|++.++++++ . ++ +|++++| ++
T Consensus 44 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~------~-~~-~i~~~sG-t~ 114 (399)
T 3tqx_A 44 EVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG------T-DD-TILYSSC-FD 114 (399)
T ss_dssp EEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT------C-SE-EEEESCH-HH
T ss_pred eEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC------C-Cc-EEEECch-HH
Confidence 5799999965 445688899999888765211 11 122235678888887775 2 23 6777666 77
Q ss_pred HHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcEEEecCCCCCc
Q 013883 182 AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRAILMNTPHNPT 255 (434)
Q Consensus 182 ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~i~~~~p~NPT 255 (434)
++..++.+++++||.|+++.|+|+.+...++..|++++.++.. |++.+++++++ ++++|++++|+|||
T Consensus 115 a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~~~~~~~v~~~~~~npt 188 (399)
T 3tqx_A 115 ANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKNN------AMGDLEAKLKEADEKGARFKLIATDGVFSMD 188 (399)
T ss_dssp HHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECTT------CTTHHHHHHHHHHTTTCSSEEEEEESEETTT
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCCC------CHHHHHHHHHhhhccCCCceEEEEeCCCCCC
Confidence 9999999999999999999999999999999999999998863 67788888766 78999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCC-CCCceEEEccCChhhccccceeeeEEeChhhHH
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPG-MYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~ 334 (434)
|.+++ +++|+++|++||+++|+||+|....++.....+....+ ..+.++++.||||.++ |.+.||+++++++++
T Consensus 189 G~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~~~~~~ 263 (399)
T 3tqx_A 189 GIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGHKEIIE 263 (399)
T ss_dssp TEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEECHHHHH
T ss_pred CCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcCHHHHH
Confidence 99997 77899999999999999999964333333222222211 1345699999999998 445599999999998
Q ss_pred HHHHHhhc--cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCH
Q 013883 335 GVRQAHSF--LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETD 412 (434)
Q Consensus 335 ~l~~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (434)
.+...... ...+.+.+.+.++..+|+...++.++++++++++++.+.+.|++.|+++.++.+++ +|+.+.. ..+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~~~~~~--~~~~ 340 (399)
T 3tqx_A 264 WLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLGFQLVPGNHPI-IPVMLGD--AQLA 340 (399)
T ss_dssp HHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSSE-EEEEEEC--HHHH
T ss_pred HHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCCE-EEEEeCC--HHHH
Confidence 88765332 23356667777777777754356788999999999999999999999888777775 4555532 1135
Q ss_pred HHHHHHHHHhcCeEEECCC
Q 013883 413 IAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 413 ~~~~~~Ll~~~GV~v~pG~ 431 (434)
.+++++|+++ ||.+.|+.
T Consensus 341 ~~~~~~l~~~-gi~v~~~~ 358 (399)
T 3tqx_A 341 TNMADHLLQE-GIYVVGFS 358 (399)
T ss_dssp HHHHHHHHHT-TEECCEEC
T ss_pred HHHHHHHHHC-CCEEeeeC
Confidence 6888888775 99999864
No 88
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=7.8e-32 Score=267.00 Aligned_cols=291 Identities=16% Similarity=0.114 Sum_probs=229.2
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcC
Q 013883 122 DGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFA 201 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~ 201 (434)
+.++.+.+++.+.+. ..|.+. ..++++++++++.+.+|.+ ++.+|++|+|+++++..++.+++++||+|++++
T Consensus 44 ~~~~~v~~a~~~~~~---~~~~~~--~~~~~~~~~~~la~~~g~~--~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~ 116 (393)
T 1vjo_A 44 NAHPSVLQAMNVSPV---GHLDPA--FLALMDEIQSLLRYVWQTE--NPLTIAVSGTGTAAMEATIANAVEPGDVVLIGV 116 (393)
T ss_dssp CCCHHHHHHHSSCCC---CTTSHH--HHHHHHHHHHHHHHHHTCC--CSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCHHHHHHHhcccc---cccCHH--HHHHHHHHHHHHHHHhCCC--CCcEEEEeCchHHHHHHHHHhccCCCCEEEEEc
Confidence 445667666654432 245442 4678889999998888862 322699999999999999999999999999999
Q ss_pred CCchh--HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEE
Q 013883 202 PFYDS--YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLV 278 (434)
Q Consensus 202 p~y~~--~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~i 278 (434)
|+|++ +...++..|++++.++.++ ++.+|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++
T Consensus 117 ~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~l 192 (393)
T 1vjo_A 117 AGYFGNRLVDMAGRYGADVRTISKPW-GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFGTLL 192 (393)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEE
T ss_pred CChhHHHHHHHHHHcCCceEEEecCC-CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcCCEE
Confidence 99999 8999999999999999975 677999999999988 8999999999999999986 677999999999999
Q ss_pred EEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHH----h--------------
Q 013883 279 FSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA----H-------------- 340 (434)
Q Consensus 279 I~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~----~-------------- 340 (434)
|+||+|.. +..... +. ..+.++++.|++|.++.+| |+||+++++++++.++.. .
T Consensus 193 i~Dea~~~---g~~~~~---~~-~~~~di~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (393)
T 1vjo_A 193 LVDTVTSL---GGVPIF---LD-AWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWG 264 (393)
T ss_dssp EEECTTTT---TTSCCC---TT-TTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHS
T ss_pred EEECCccc---cCcCCc---cc-ccCccEEEEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhc
Confidence 99999982 211111 22 2356789999999998677 999999999988776432 0
Q ss_pred -hcccc-CCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCe---eEEEeeecCCCCCCCHHH
Q 013883 341 -SFLTF-ATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSG---TYFVVVDHTPFGHETDIA 414 (434)
Q Consensus 341 -~~~~~-~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~ 414 (434)
....+ +.+.+.+.++..+|+.. ++++++++++++++++.+.+.|++.|+++..+++ +.++++.++ .+. +..+
T Consensus 265 ~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~-~~~~ 342 (393)
T 1vjo_A 265 SERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIP-DGV-DGKA 342 (393)
T ss_dssp TTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECC-TTC-CHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcC-CCC-CHHH
Confidence 01233 67888898888888863 3357888999999999999999988988877664 234555552 222 5778
Q ss_pred HHHHHHHhcCeEEECCCCC
Q 013883 415 FCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 415 ~~~~Ll~~~GV~v~pG~~F 433 (434)
++++|++++||.+.||..|
T Consensus 343 ~~~~l~~~~gi~v~~g~~~ 361 (393)
T 1vjo_A 343 VARRLLNEHNIEVGGGLGE 361 (393)
T ss_dssp HHHHHHHHHCEECEECCGG
T ss_pred HHHHHHhhCCEEEecCccc
Confidence 9998887679999999765
No 89
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.9e-31 Score=263.23 Aligned_cols=289 Identities=18% Similarity=0.188 Sum_probs=228.5
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCC
Q 013883 123 GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAP 202 (434)
Q Consensus 123 ~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p 202 (434)
.++.+.+++.+.+. ..|.+. ..++++++++++.+.+|.+ +++ ++++++|+++++..++.+++++||+|++++|
T Consensus 31 ~~~~v~~a~~~~~~---~~~~~~--~~~~~~~~~~~la~~~g~~-~~~-~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~ 103 (386)
T 2dr1_A 31 CFPEVLEIMKVQMF---SHRSKE--YRKVHMDTVERLREFLEVE-KGE-VLLVPSSGTGIMEASIRNGVSKGGKVLVTII 103 (386)
T ss_dssp CCHHHHHHTTSCCC---CTTSHH--HHHHHHHHHHHHHHHHTCS-SSE-EEEESSCHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred CcHHHHHHHhcccc---cccCHH--HHHHHHHHHHHHHHHhCCC-CCc-EEEEeCChHHHHHHHHHHhhcCCCeEEEEcC
Confidence 35556655543322 245432 3688999999998888875 455 7999999999999999999999999999999
Q ss_pred Cchh--HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc--ccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEE
Q 013883 203 FYDS--YEATLSMAGAKIKCITLRPPDFAIPIEELKSTI--SKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLV 278 (434)
Q Consensus 203 ~y~~--~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i--~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~i 278 (434)
+|++ +...+...|++++.++.++ ++.+|++.+++++ .+++++|++++|+||||.+.+ +++|+++|++||+++
T Consensus 104 ~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~l 179 (386)
T 2dr1_A 104 GAFGKRYKEVVESNGRKAVVLEYEP-GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDKLV 179 (386)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEE
T ss_pred CchhHHHHHHHHHhCCceEEEecCC-CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCCeE
Confidence 9998 8888999999999999875 6779999999999 458999999999999999986 678999999999999
Q ss_pred EEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHH----------------HH--h
Q 013883 279 FSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVR----------------QA--H 340 (434)
Q Consensus 279 I~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~----------------~~--~ 340 (434)
|+||+|..+.+. .. +. ..+.++++.|+||.++.+ .++||+++++++++.++ .. .
T Consensus 180 i~D~a~~~~~~~---~~---~~-~~~~di~~~s~sK~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (386)
T 2dr1_A 180 FVDAVSAMGGAD---IK---FD-KWGLDVVFSSSQKAFGVP-PGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEK 251 (386)
T ss_dssp EEECTTTBTTBC---CC---TT-TTTCSEEEEETTSTTCCC-SSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHH
T ss_pred EEEccccccCcc---cc---cc-ccCCcEEEEeccccccCC-CceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccC
Confidence 999999875432 11 21 235679999999999855 24999999999887662 22 2
Q ss_pred hccccCCchHHHHHHHHHHhCChHH--HHHHHHHHHHHHHHHHHHhhhCCCEeecCC---eeEEEeeecCCCCCCCHHHH
Q 013883 341 SFLTFATSTPMQWAATAALRAPETY--YEELKRDYSAKKAILVEGLNAVGFKVFPSS---GTYFVVVDHTPFGHETDIAF 415 (434)
Q Consensus 341 ~~~~~~~~~~~q~a~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 415 (434)
....++.+.+.+.++..+|+...++ +++++++++++++.+.+.|++.|+++..+. .+.++|+.++. +. +..++
T Consensus 252 ~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~ 329 (386)
T 2dr1_A 252 ESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPP-GI-KGDEV 329 (386)
T ss_dssp SSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCT-TC-CHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCC-CC-CHHHH
Confidence 2445677888898888888764333 678899999999999999998888887664 25567777632 22 57789
Q ss_pred HHHHHHhcCeEEECCCCC
Q 013883 416 CEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 416 ~~~Ll~~~GV~v~pG~~F 433 (434)
+++|+++ ||.+.||..|
T Consensus 330 ~~~l~~~-gi~v~~~~~~ 346 (386)
T 2dr1_A 330 YEAMRKR-GFELAKGYGS 346 (386)
T ss_dssp HHHHHHT-TEECEECCGG
T ss_pred HHHHHHC-CeEEecCccc
Confidence 9999877 9999998643
No 90
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=2.9e-31 Score=263.46 Aligned_cols=299 Identities=16% Similarity=0.165 Sum_probs=229.3
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCC---CCC------CCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGK---NQY------ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~---~~Y------~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
+.++|+.+.++ +.++.+.+++.+.+.+.. +.| .+..+..++|++++++++ .. +++ +|++++|++
T Consensus 23 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~----~~-~~~-~v~~~~g~t 95 (406)
T 1kmj_A 23 PLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN----AR-SAE-ELVFVRGTT 95 (406)
T ss_dssp ECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT----CS-CGG-GEEEESSHH
T ss_pred ceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcC----CC-CCC-eEEEeCChh
Confidence 47899999887 567788999988887532 111 233456778888888775 11 455 899999999
Q ss_pred HHHHHHHHHc----cCCCCeEEEcCCCchh----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCC
Q 013883 181 EAIAATILGL----INPGDEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPH 252 (434)
Q Consensus 181 ~ai~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~ 252 (434)
+++.+++.++ +++||+|++++|+|++ +...++..|++++.++.++ ++.+|++.+++++++++++|++++|+
T Consensus 96 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~ 174 (406)
T 1kmj_A 96 EGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP-DGTLQLETLPTLFDEKTRLLAITHVS 174 (406)
T ss_dssp HHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT-TSCBCGGGHHHHCCTTEEEEEEESBC
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC-CCCcCHHHHHHHhccCCeEEEEeCCC
Confidence 9999999999 8999999999999875 4455777899999999874 67799999999999899999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhh
Q 013883 253 NPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL 332 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~ 332 (434)
||||.+++ +++|+++|++||+++|+||+|..+.. ...+.. .+.++++.|++|.+|.+| +||+++++++
T Consensus 175 nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~---~~~~~~----~~~d~~~~s~~K~~g~~G--~G~~~~~~~~ 242 (406)
T 1kmj_A 175 NVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH---PVDVQA----LDCDFYVFSGHKLYGPTG--IGILYVKEAL 242 (406)
T ss_dssp TTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS---CCCHHH----HTCSEEEEEGGGTTSCTT--CEEEEECHHH
T ss_pred ccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC---CCcccc----cCCCEEEEEchhccCCCC--cEEEEEeHHH
Confidence 99999998 77899999999999999999986421 111111 246788999999999778 8999999988
Q ss_pred HHHHHHHhhc---------------------cccCCchHHHHHHH-HHHhCCh-HHHHHHHHHHHHHHHHHHHHhhhC-C
Q 013883 333 TWGVRQAHSF---------------------LTFATSTPMQWAAT-AALRAPE-TYYEELKRDYSAKKAILVEGLNAV-G 388 (434)
Q Consensus 333 ~~~l~~~~~~---------------------~~~~~~~~~q~a~~-~~L~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g 388 (434)
++.++..... ...+.+.+.+.++. .+++... .++++++++++++++.+.+.|+++ |
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 322 (406)
T 1kmj_A 243 LQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPD 322 (406)
T ss_dssp HHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred HhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8776543210 11334566666554 5555422 356778889999999999999987 8
Q ss_pred CEeecC--CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 389 FKVFPS--SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 389 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+++..+ .++++.| .+. +. +..++++.|. ++||.+.||..|
T Consensus 323 ~~~~~~~~~~~~~~~-~~~--~~-~~~~~~~~l~-~~gi~v~~g~~~ 364 (406)
T 1kmj_A 323 LTLYGPQNRLGVIAF-NLG--KH-HAYDVGSFLD-NYGIAVRTGHHC 364 (406)
T ss_dssp EEEESCTTCCSEEEE-EET--TC-CHHHHHHHHH-HTTEECEEECTT
T ss_pred eEEecCCCcCCEEEE-EEC--CC-CHHHHHHHHh-hCCcEEEecccc
Confidence 988887 7887776 443 22 4677887664 559999998754
No 91
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.98 E-value=2.4e-31 Score=267.07 Aligned_cols=299 Identities=18% Similarity=0.142 Sum_probs=225.0
Q ss_pred CCeeEeCCCCC-CCCCcHHHHHHHHHHHHc-C--CCCCCCCCCc----HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 109 HGAINLGQGFP-NFDGPDFVKDAAIQAIRD-G--KNQYARGHGV----PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 109 ~~~i~l~~g~p-~~~~~~~v~~~~~~~~~~-~--~~~Y~~~~G~----~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
...|||+.|.+ ++.+++.+.+++.+++.+ + ...|....|. .+|++.++++++ . + +.+++++++
T Consensus 64 ~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g----~----~-~~i~~~sGs 134 (427)
T 2w8t_A 64 KDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG----T----T-GAIVFSTGY 134 (427)
T ss_dssp EEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT----C----S-EEEEESCHH
T ss_pred ceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC----C----C-ceEEecCcH
Confidence 35789999964 656788899999988876 3 2234444454 566666666663 2 2 344445556
Q ss_pred HHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc----CCcEEEecCCCCCcc
Q 013883 181 EAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK----NTRAILMNTPHNPTG 256 (434)
Q Consensus 181 ~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----~~~~i~~~~p~NPTG 256 (434)
+++..++.+++++||.|+++.|+|..+...+...|++++.++. .|++.|++++++ ++++|++++++||||
T Consensus 135 ~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG 208 (427)
T 2w8t_A 135 MANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH------NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLG 208 (427)
T ss_dssp HHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT------TCHHHHHHHHHTSCSSSCEEEEEESEETTTT
T ss_pred HHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCC
Confidence 7898899999999999999999999999999999999988874 489999999876 788999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccC-CCCCCCceEEEccCChhhccccceeeeEEeChhhHHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIAS-LPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG 335 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~ 335 (434)
.+++ +++|+++|++||+++|+||+|..+.++.....+.. +.-..+.++++.||||.+|++| ||+++++++++.
T Consensus 209 ~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~~l~~~ 282 (427)
T 2w8t_A 209 DIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNHPKFEA 282 (427)
T ss_dssp EECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECCTTGGG
T ss_pred CccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCHHHHHH
Confidence 9997 77899999999999999999999877643333222 2112345899999999999776 999999998877
Q ss_pred HHHHhh--ccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEee-cC-CeeEEEeeecCCCCCCC
Q 013883 336 VRQAHS--FLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVF-PS-SGTYFVVVDHTPFGHET 411 (434)
Q Consensus 336 l~~~~~--~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~-~~~~~~~~~~~~~~~~~ 411 (434)
+..... ..+.+.+...+.++..+|+..+ .+++++++++++++++.+.|+++|+.+. ++ .++ ++|+.+.. ..+
T Consensus 283 l~~~~~~~~~~~~~~~~~~aa~~~al~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~-~~~~~~~~--~~~ 358 (427)
T 2w8t_A 283 VRLACRPYIFTASLPPSVVATATTSIRKLM-TAHEKRERLWSNARALHGGLKAMGFRLGTETCDSA-IVAVMLED--QEQ 358 (427)
T ss_dssp GGGTCHHHHSSCCCCHHHHHHHHHHHHHHT-SCHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSS-EEEEEESS--HHH
T ss_pred HHHhcccccccCCCCHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCC-EEEEEECC--HHH
Confidence 755421 1234556666666667776422 2467788999999999999998899887 55 454 56676632 113
Q ss_pred HHHHHHHHHHhcCeEEECCCCC
Q 013883 412 DIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
..+++++|+++ ||.+.||..|
T Consensus 359 ~~~l~~~L~~~-Gi~v~~~~~~ 379 (427)
T 2w8t_A 359 AAMMWQALLDG-GLYVNMARPP 379 (427)
T ss_dssp HHHHHHHHHHT-TEECEEECTT
T ss_pred HHHHHHHHHHC-CeEEeeeCCC
Confidence 56788888776 9999998765
No 92
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.98 E-value=1.1e-31 Score=265.15 Aligned_cols=299 Identities=16% Similarity=0.138 Sum_probs=227.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCC----C---CCCC-CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGK----N---QYAR-GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~----~---~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
+.++|..+.+. +.++.+.+++.+++.+.. . .|.. ..+..+++++++++++ ++++ +|++++|+++
T Consensus 16 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g------~~~~-~v~~~~g~t~ 87 (390)
T 1elu_A 16 NKTYFNFGGQG-ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFN------VDPN-TITITDNVTT 87 (390)
T ss_dssp TSEECCTTTCC-CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTT------SCGG-GEEEESSHHH
T ss_pred CeEEecCCccC-CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcC------CCHH-HEEEeCChHH
Confidence 67888887644 456788888888776521 1 3433 2467788888888875 4566 8999999999
Q ss_pred HHHHHHHHc-cCCCCeEEEcCCCchhHHHH----HHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCc
Q 013883 182 AIAATILGL-INPGDEVILFAPFYDSYEAT----LSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPT 255 (434)
Q Consensus 182 ai~~~~~~l-~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPT 255 (434)
++.+++.++ +++||+|+++.|+|+++... ++..|++++.++.++ +++.+|++.+++++++++++|++++|+|||
T Consensus 88 a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~npt 167 (390)
T 1elu_A 88 GCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNT 167 (390)
T ss_dssp HHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTT
T ss_pred HHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCC
Confidence 999999999 89999999999999997654 466899999999864 468899999999999899999999999999
Q ss_pred ccCCCHHHHHHHHHHHH----HcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh
Q 013883 256 GKMFTREELNVIASLCI----ENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH 331 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~----~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~ 331 (434)
|.+++ +++|.++|+ +||+++|+||+|.... .... +. ..+.++++.|++|.+. +|.++||++++++
T Consensus 168 G~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~---~~~~---~~-~~~~d~~~~s~~K~~~-~~~g~G~~~~~~~ 236 (390)
T 1elu_A 168 GQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS---LPLD---FS-RLEVDYYAFTGHKWFA-GPAGVGGLYIHGD 236 (390)
T ss_dssp CCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT---BCCC---TT-TSCCSEEEEESSSTTC-CCTTCEEEEECTT
T ss_pred ceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC---cCCC---hh-hcCCCEEEcccccccc-CCCceEEEEECHH
Confidence 99998 677889999 9999999999998421 1111 11 2345688999999443 5677999999998
Q ss_pred hHHHHHHH----------------------hhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 332 LTWGVRQA----------------------HSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 332 ~~~~l~~~----------------------~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
+++.++.. ......+.+...+.++..+|+.. .+++++++++++++++.+.+.|+++
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 316 (390)
T 1elu_A 237 CLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQL 316 (390)
T ss_dssp TGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 87665432 12223445666666666666532 2247888999999999999999987
Q ss_pred -CCEee---cCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 388 -GFKVF---PSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 388 -g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
|+++. ++.++++.| ++.+ +. +..+++++|. ++||.+.||.
T Consensus 317 ~g~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~l~-~~gi~v~~~~ 360 (390)
T 1elu_A 317 PHVHCLATSAPQAGLVSF-TVDS-PL-GHRAIVQKLE-EQRIYLRTIA 360 (390)
T ss_dssp TTEEESCSSCCSSSEEEE-EECS-SS-CHHHHHHHHH-HTTEECEEET
T ss_pred CCcEEecCccccccEEEE-EcCC-CC-CHHHHHHHHH-HCCEEEEecC
Confidence 88887 346787766 6532 22 5778888885 4599999975
No 93
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.98 E-value=2.2e-31 Score=264.56 Aligned_cols=297 Identities=17% Similarity=0.145 Sum_probs=226.7
Q ss_pred cCCeeEeCCCCCCCC--CcHHHHHHHHHHHHc-CC----CCCC--CCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCC
Q 013883 108 KHGAINLGQGFPNFD--GPDFVKDAAIQAIRD-GK----NQYA--RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSG 178 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~--~~~~v~~~~~~~~~~-~~----~~Y~--~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G 178 (434)
+...|||+.|.| ++ +++.+.+++.+++.. +. ..|. ...+..+|+++++++++ .+ + +|++++|
T Consensus 44 g~~~id~~~~~~-~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~-~-~i~~~sG 114 (401)
T 1fc4_A 44 GSHVINFCANNY-LGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLG------ME-D-AILYSSC 114 (401)
T ss_dssp SCEEEECCCSCT-TSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHT------CS-E-EEEESCH
T ss_pred CccEEEeeccCc-ccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhC------CC-c-EEEeCCh
Confidence 346899999965 43 588899999888765 21 1221 13456789999999884 33 4 6777666
Q ss_pred hHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcEEEecCCC
Q 013883 179 CTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRAILMNTPH 252 (434)
Q Consensus 179 ~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~i~~~~p~ 252 (434)
++++..++.+++++||.|+++.|+|..+...+...|++++.++. .|++.+++++++ ++++|++++||
T Consensus 115 -s~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~ 187 (401)
T 1fc4_A 115 -FDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN------NDMQELEARLKEAREAGARHVLIATDGVF 187 (401)
T ss_dssp -HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT------TCHHHHHHHHHHHHHTTCSSEEEEEESEE
T ss_pred -HHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC------CCHHHHHHHHHHhhccCCCceEEEEeCCc
Confidence 67888899999999999999999999998999999999998873 378999988875 78999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCC-cccc-CCCCc-cccCCCCCCCceEEEccCChhh-ccccceeeeEEe
Q 013883 253 NPTGKMFTREELNVIASLCIENDVLVFSDEVYD-KLAF-EMDHI-SIASLPGMYERTVTMNSLGKTF-SLTGWKIGWAIA 328 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~-~~~~-~~~~~-~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~~~~ 328 (434)
||||.+++ +++|.++|++||+++|+||+|. ++.+ .+... ....+ ..+.++++.||||.+ |.+| ||+++
T Consensus 188 nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~--~~~~di~~~s~sK~~~~~~g---G~~~~ 259 (401)
T 1fc4_A 188 SMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDV--MGRVDIITGTLGKALGGASG---GYTAA 259 (401)
T ss_dssp TTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTC--TTCCSEEEEESSSTTCSSSC---EEEEE
T ss_pred CCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCC--CcCCcEEEecchhhccCCCC---EEEEc
Confidence 99999997 7789999999999999999995 7653 33221 11222 124579999999999 5454 99999
Q ss_pred ChhhHHHHHHHhhc--cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCC
Q 013883 329 PPHLTWGVRQAHSF--LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTP 406 (434)
Q Consensus 329 ~~~~~~~l~~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 406 (434)
++++++.+...... .+++.+.+.+.++..+|+..++ .++.+++++++++.+.+.|++.|+++.++ .+.++|+++..
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~ 337 (401)
T 1fc4_A 260 RKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA-GSELRDRLWANARQFREQMSAAGFTLAGA-DHAIIPVMLGD 337 (401)
T ss_dssp CHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHHTTCCBCCS-SSSEEEEEEEC
T ss_pred CHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCCcccCC-CCCEEEEEcCC
Confidence 99999888765421 2557888889888888875321 46778889999999999999989888754 44566777632
Q ss_pred CCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 407 FGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 407 ~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+ .+..+++++|.++ ||.+.||..|
T Consensus 338 -~-~~~~~l~~~l~~~-gi~v~~~~~~ 361 (401)
T 1fc4_A 338 -A-VVAQKFARELQKE-GIYVTGFFYP 361 (401)
T ss_dssp -H-HHHHHHHHHHHHT-TEECCEECTT
T ss_pred -h-HHHHHHHHHHHHC-CcEEeeecCC
Confidence 1 1356788888765 9999998754
No 94
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.98 E-value=2.7e-31 Score=259.28 Aligned_cols=298 Identities=14% Similarity=0.095 Sum_probs=228.0
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
++.|+|+.+.+. ++++.+.+++.+++. .|.+..|..++++++++++.+.+| .+++ +|++++|+++++..++.
T Consensus 13 p~~i~l~~~~~~-~~~~~v~~a~~~~~~----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~-~v~~~~g~t~a~~~~~~ 84 (359)
T 1svv_A 13 PKPYSFVNDYSV-GMHPKILDLMARDNM----TQHAGYGQDSHCAKAARLIGELLE--RPDA-DVHFISGGTQTNLIACS 84 (359)
T ss_dssp --CEECSCSCSS-CCCHHHHHHHHHHTT----CCCCSTTCSHHHHHHHHHHHHHHT--CTTS-EEEEESCHHHHHHHHHH
T ss_pred CeeEEecCCCcC-CCCHHHHHHHHHHHh----hccccccccHHHHHHHHHHHHHhC--CCCc-cEEEeCCchHHHHHHHH
Confidence 467999988776 677888888888764 377777888999999999998888 4466 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchhHHH--HHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccC-------CcEEEecCCCCCcccCC
Q 013883 189 GLINPGDEVILFAPFYDSYEA--TLSMAGAKIKCITLRPPDFAIPIEELKSTISKN-------TRAILMNTPHNPTGKMF 259 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~~--~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~-------~~~i~~~~p~NPTG~~~ 259 (434)
.++++||+|++++|+|+.+.. .++..|++++.+|.+ ++.+|++.++++++++ +++|++++| ||||.++
T Consensus 85 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~ 161 (359)
T 1svv_A 85 LALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP--DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQY 161 (359)
T ss_dssp HHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCC
T ss_pred HHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC--CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceec
Confidence 999999999999999999987 588899999999975 6889999999999776 889999998 7999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHH
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA 339 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~ 339 (434)
+.+++++|+++|++||+++|+||+|.++.++........+.-.....++..|++|..+ ...+|++++++++++.++..
T Consensus 162 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~~~~~~~~~~~ 239 (359)
T 1svv_A 162 TKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIILNDALKPNARHL 239 (359)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECSGGGCTTHHHH
T ss_pred CHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC--CCceEEEEEcccHHHHHHHH
Confidence 9999999999999999999999999655332211111100000112367788999744 34579999999888777654
Q ss_pred hh-c-cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHH
Q 013883 340 HS-F-LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCE 417 (434)
Q Consensus 340 ~~-~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (434)
.. . ..+..+.....++..+|++ . .+++++++++++++.+.+.|+..|+++..+.+++|+|+++. .++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 310 (359)
T 1svv_A 240 IKQRGALMAKGWLLGIQFEVLMKD-N-LFFELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPILE-------NTMIA 310 (359)
T ss_dssp HHHTTCCCTTTHHHHHHHHHHTST-T-HHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEECBEEE-------HHHHH
T ss_pred HhcCCcccccchhhHHHHHHHHhh-h-hHHHHHHHHHHHHHHHHHHhccCCeEEccCCccceEEEEcC-------HHHHH
Confidence 21 1 1122222333334445554 2 45778899999999999999656888887788888888762 47888
Q ss_pred HHHHhcCeEEE
Q 013883 418 YLIKEVGVVAI 428 (434)
Q Consensus 418 ~Ll~~~GV~v~ 428 (434)
+|++++||.+.
T Consensus 311 ~l~~~~gi~v~ 321 (359)
T 1svv_A 311 ELNNDFDMYTV 321 (359)
T ss_dssp HHTTTEECEEE
T ss_pred HHHHhcCEEEE
Confidence 88777699884
No 95
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.97 E-value=3.2e-31 Score=263.48 Aligned_cols=300 Identities=16% Similarity=0.140 Sum_probs=223.8
Q ss_pred CeeEeCCCCC-CCCCcHHHHHHHHHHHHc-CC------CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQGFP-NFDGPDFVKDAAIQAIRD-GK------NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g~p-~~~~~~~v~~~~~~~~~~-~~------~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
+.++|..+.. +++++|.+.+++.+++.+ .. ..|....+..++|++++++++ . ++ +|++++|++
T Consensus 47 ~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~-~~-~i~~~sG~~- 117 (401)
T 2bwn_A 47 DITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ------K-EA-ALVFSSAYN- 117 (401)
T ss_dssp EEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT------C-SE-EEEESCHHH-
T ss_pred cEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-Cc-EEEECCcHH-
Confidence 4578877643 565677899999888865 21 134454567889999998875 2 34 788888866
Q ss_pred HHHHHHHHcc--CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc----cCCcEEEecCCCCCc
Q 013883 182 AIAATILGLI--NPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS----KNTRAILMNTPHNPT 255 (434)
Q Consensus 182 ai~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPT 255 (434)
++..++..+. .+||+|+++.|+|+.+...++..|++++.++.+ |++.+++.++ +++++|++++|+|||
T Consensus 118 a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~le~~l~~~~~~~~~~v~~~~~~npt 191 (401)
T 2bwn_A 118 ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN------DVAHLRELIAADDPAAPKLIAFESVYSMD 191 (401)
T ss_dssp HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT------CHHHHHHHHHHSCTTSCEEEEEESBCTTT
T ss_pred HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC------CHHHHHHHHHhhccCCceEEEEecCcCCC
Confidence 7776666553 589999999999999999999999999999864 6888888876 578999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC-CCceEEEccCChhhccccceeeeEEeChhhHH
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM-YERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~ 334 (434)
|.+++ +++|+++|++||+++|+||+|....++.....+....+. .+.+++++||||.+|++| ||+++++++++
T Consensus 192 G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~~~~~ 265 (401)
T 2bwn_A 192 GDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARMVD 265 (401)
T ss_dssp CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHHHH
T ss_pred CCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCHHHHH
Confidence 99997 677999999999999999999965554322222111111 124688999999999888 99999999888
Q ss_pred HHHHHhhcc--ccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCC
Q 013883 335 GVRQAHSFL--TFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHET 411 (434)
Q Consensus 335 ~l~~~~~~~--~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 411 (434)
.++...... ..+.+.+.+.++..+|+.. ...+++++++++++++.+.+.|++.|+++.++.++ ++|+.+.. + .+
T Consensus 266 ~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~-~-~~ 342 (401)
T 2bwn_A 266 AVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDHGSH-IVPVVIGD-P-VH 342 (401)
T ss_dssp HHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSS-CEEEECCC-H-HH
T ss_pred HHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCCCcccCCCCC-eEEEEeCC-h-HH
Confidence 876543221 2233457777777777642 22357788899999999999998888888877777 56666532 1 13
Q ss_pred HHHHHHHHHHhcCeEEECCCCC
Q 013883 412 DIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
..+++++|++++||.+.||..|
T Consensus 343 ~~~~~~~L~~~~gi~v~~~~~~ 364 (401)
T 2bwn_A 343 TKAVSDMLLSDYGVYVQPINFP 364 (401)
T ss_dssp HHHHHHHHHHHHCEECCEECTT
T ss_pred HHHHHHHHHhcCCEEEeecCCC
Confidence 5678888876679999987654
No 96
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.97 E-value=6.8e-32 Score=265.08 Aligned_cols=291 Identities=15% Similarity=0.108 Sum_probs=220.1
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCC---------CCCCCCCCcHHHHHH-HHHHHHhhcCCCCCCCCcEEEcCC
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGK---------NQYARGHGVPEFNSA-IASRFKKDSGLEVDPEKEVTVTSG 178 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~---------~~Y~~~~G~~~lr~~-ia~~l~~~~g~~~~~~~~i~~t~G 178 (434)
++.++|..|.+..++++.+.+++.+.+.... ..|.+..+..+++++ ++++++ .+ +|++++|
T Consensus 7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~--------~~-~v~~~~g 77 (371)
T 2e7j_A 7 KDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG--------CD-VARVTNG 77 (371)
T ss_dssp -CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT--------SS-EEEEESS
T ss_pred CCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC--------CC-EEEEeCC
Confidence 3678888876666778889998888765431 234566788999999 999876 23 7999999
Q ss_pred hHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEE--cCCCCCCCCHHHHHhhcc-----cCCcEEEecCC
Q 013883 179 CTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCIT--LRPPDFAIPIEELKSTIS-----KNTRAILMNTP 251 (434)
Q Consensus 179 ~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~-----~~~~~i~~~~p 251 (434)
+++++..++.+++++||+|++++|+|+++...+...|++++.++ .++ ++.+|++.++++++ +++++|++++|
T Consensus 78 ~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~ 156 (371)
T 2e7j_A 78 AREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYP-DYAITPENFAQTIEETKKRGEVVLALITYP 156 (371)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTT-TCCCCHHHHHHHHHHHTTTSCEEEEEEESS
T ss_pred hHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCC-CCCcCHHHHHHHHHhhcccCCeEEEEEECC
Confidence 99999999999999999999999999999999999999999999 654 68899999999998 68899999999
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh
Q 013883 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH 331 (434)
Q Consensus 252 ~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~ 331 (434)
+||||.+++. ++|.++|++||+++|+||+|..+... ..+..+ +..+++.|+||.++ .|.|+||++++++
T Consensus 157 ~nptG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~---~~~~~~----~~di~~~s~sK~~~-~~~~~G~~~~~~~ 225 (371)
T 2e7j_A 157 DGNYGNLPDV---KKIAKVCSEYDVPLLVNGAYAIGRMP---VSLKEI----GADFIVGSGHKSMA-ASGPIGVMGMKEE 225 (371)
T ss_dssp CTTTCCCCCH---HHHHHHHHTTTCCEEEECTTTBTTBC---CCHHHH----TCSEEEEEHHHHSS-CCSSCEEEEECTT
T ss_pred CCCCcccCCH---HHHHHHHHHcCCeEEEECccccCCCC---CChhhc----CCCEEEecCCcCCC-CCCCcEEEEEech
Confidence 9999999974 77899999999999999999985432 122221 23489999999998 4569999999998
Q ss_pred hHHH-HHHHhh--cc-----ccCCchHHHHHHHHHHhCChHHHHHHHHHH--HHHHHHHHHHhhhCCCEeecCC--eeEE
Q 013883 332 LTWG-VRQAHS--FL-----TFATSTPMQWAATAALRAPETYYEELKRDY--SAKKAILVEGLNAVGFKVFPSS--GTYF 399 (434)
Q Consensus 332 ~~~~-l~~~~~--~~-----~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~--~~~~~~l~~~L~~~g~~~~~~~--~~~~ 399 (434)
+++. ++.... .. ..+.+...+.++..+++...+ +.++++ +++++.+.+.|++.|+++..+. .+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 302 (371)
T 2e7j_A 226 WAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE---RIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDL 302 (371)
T ss_dssp TTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH---HGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSE
T ss_pred hhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCcEEecCCCccCce
Confidence 8766 554332 11 234455555555566653221 556677 8888999999988899887663 2346
Q ss_pred EeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 400 VVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
+|+++. +..++.++|. ++||.+.|
T Consensus 303 ~~~~~~-----~~~~~~~~l~-~~gi~~~~ 326 (371)
T 2e7j_A 303 MFFHAE-----VLYEISKKAK-GGRFFLYR 326 (371)
T ss_dssp EEEECH-----HHHHHHHHSS-SGGGHHHH
T ss_pred EEEECC-----CHHHHHHHHH-HCCEEEEe
Confidence 777763 3667888776 56998876
No 97
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.97 E-value=3e-30 Score=255.33 Aligned_cols=289 Identities=18% Similarity=0.242 Sum_probs=217.9
Q ss_pred CCCCCCCC-c---HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-
Q 013883 116 QGFPNFDG-P---DFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL- 190 (434)
Q Consensus 116 ~g~p~~~~-~---~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l- 190 (434)
.+.|++++ | +.+.+++.+++.++...|.+..+..+||++++++++ . ++ +|++++| ++++.+++.++
T Consensus 4 ~~~p~f~~~p~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~------~-~~-~i~~~sG-t~al~~~l~~l~ 74 (388)
T 1b9h_A 4 RKAPEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHG------A-AH-ALAVTNG-THALELALQVMG 74 (388)
T ss_dssp -CCCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTT------C-SE-EEEESCH-HHHHHHHHHHTT
T ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhC------C-Ce-EEEeCCH-HHHHHHHHHHcC
Confidence 35678876 6 889999999988755567777788999999999986 2 23 6888877 89999999999
Q ss_pred cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHH
Q 013883 191 INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASL 270 (434)
Q Consensus 191 ~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~l 270 (434)
+++||+|+++.|+|+.+...+...|++++.++++++++.+|++.+++++++++++|+ |+||||.+.+ +++|.++
T Consensus 75 ~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~l 148 (388)
T 1b9h_A 75 VGPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAKI 148 (388)
T ss_dssp CCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHH
T ss_pred CCCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHHH
Confidence 899999999999999999999999999999999876688999999999988887776 9999999874 6778999
Q ss_pred HHHcCcEEEEcCcCCcc-ccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh-h--HHHHHHHhhcc---
Q 013883 271 CIENDVLVFSDEVYDKL-AFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH-L--TWGVRQAHSFL--- 343 (434)
Q Consensus 271 a~~~~~~iI~Deay~~~-~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~-~--~~~l~~~~~~~--- 343 (434)
|++||+++|+|++|..+ .+.+. .+..+ .++.+.||||..+++|.|+||++++++ + ++.++......
T Consensus 149 a~~~~~~li~D~a~~~g~~~~~~--~~~~~-----~~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (388)
T 1b9h_A 149 SADTGVPLLQDAAHAHGARWQGK--RVGEL-----DSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPR 221 (388)
T ss_dssp HHHHTCCBCEECTTCTTCEETTE--EGGGS-----SSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCT
T ss_pred HHHcCCEEEEecchhcCCccCCe--ecccc-----cceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999863 33321 22222 157889999777777889999999876 5 45554433210
Q ss_pred ------------ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeec------CCeeEEEeeec
Q 013883 344 ------------TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFP------SSGTYFVVVDH 404 (434)
Q Consensus 344 ------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~------~~~~~~~~~~~ 404 (434)
++..+.+...++...+ +++++.+++++++++.+.+.|+++ |+.+.. +.+++++|+.+
T Consensus 222 ~~~~~~~~~~g~~~~~~~~~~a~~~~~~----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (388)
T 1b9h_A 222 DDRRYFHKIAGSNMRLNEFSASVLRAQL----ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRI 297 (388)
T ss_dssp TCSSCCCCSCCCBCBCBHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEEC
T ss_pred cCccceeecccccCCcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEe
Confidence 1112333333322222 246667788888999999999987 787765 35567888887
Q ss_pred CCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 405 TPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 405 ~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
...+..+..++.++|.+ +||.+.+|.
T Consensus 298 ~~~~~~~~~~l~~~L~~-~gI~v~~~~ 323 (388)
T 1b9h_A 298 PGLTEERRNALVDRLVE-AGLPAFAAF 323 (388)
T ss_dssp TTCCHHHHHHHHHHHHH-TTCCEEECC
T ss_pred CCcCcccHHHHHHHHHH-CCCCccccc
Confidence 43211135678888875 599998863
No 98
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.97 E-value=1.3e-30 Score=258.02 Aligned_cols=298 Identities=13% Similarity=0.161 Sum_probs=220.7
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYAR--GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
..+++..| ..+.++.+.+++.+++.. .|.+ ..+..++++.++++++ .+++.+|++++|+++++.+++
T Consensus 19 ~~~~~~~g--~~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g------~~~~~~i~~~~g~t~a~~~~~ 87 (393)
T 2huf_A 19 NKLLMGPG--PSNAPQRVLDAMSRPILG---HLHPETLKIMDDIKEGVRYLFQ------TNNIATFCLSASGHGGMEATL 87 (393)
T ss_dssp CCEECSSS--CCCCCHHHHHHTTSCCCC---TTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESSCHHHHHHHHH
T ss_pred CeEEecCC--CCCCCHHHHHHHHhhhcc---CCCHHHHHHHHHHHHHHHHHhC------CCCCcEEEEcCcHHHHHHHHH
Confidence 45666655 245677777766554432 2422 1245677777777765 334226999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhH--HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHH
Q 013883 188 LGLINPGDEVILFAPFYDSY--EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
.+++++||+|++++|+|+++ ...++..|++++.+++++ ++.+|++.+++++++ ++++|++++|+||||.+++ +
T Consensus 88 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l 163 (393)
T 2huf_A 88 CNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV-GQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQG---L 163 (393)
T ss_dssp HHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---C
T ss_pred HHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC-CCCCCHHHHHHHHhccCCcEEEEEccCCCccccCC---H
Confidence 99999999999999999884 334566899999999875 567999999999988 8999999999999999997 6
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhh-ccccceeeeEEeChhhHHHHHHHh---
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTF-SLTGWKIGWAIAPPHLTWGVRQAH--- 340 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~~~~~~~~~~~l~~~~--- 340 (434)
++|+++|++||+++|+||+|... ..... +. ..+.++++.|++|.+ |++|+ ||+++++++++.++...
T Consensus 164 ~~i~~~~~~~~~~li~D~a~~~~---~~~~~---~~-~~~~d~~~~s~sK~l~g~~G~--G~~~~~~~~~~~~~~~~~~~ 234 (393)
T 2huf_A 164 EGVGALCHQHNCLLIVDTVASLG---GAPMF---MD-RWEIDAMYTGSQKVLGAPPGI--TPVSFSHRAVERYKRRNTKV 234 (393)
T ss_dssp TTHHHHHHHTTCEEEEECTTTBT---TBCCC---TT-TTTCSEEECCSSSTTCCCSSC--EEEEECHHHHHHHHTCSSCC
T ss_pred HHHHHHHHHcCCEEEEEcccccC---CCCcc---hh-hcCccEEEECCCcccccCCCe--EEEEECHHHHHHHhhcCCCC
Confidence 78999999999999999998642 11111 21 234678899999975 56775 99999999988776541
Q ss_pred -h-------------------ccccCCchHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHhhhCCCEeecCC---e
Q 013883 341 -S-------------------FLTFATSTPMQWAATAALRAPET-YYEELKRDYSAKKAILVEGLNAVGFKVFPSS---G 396 (434)
Q Consensus 341 -~-------------------~~~~~~~~~~q~a~~~~L~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~ 396 (434)
. ....+.+...+.++..+|+...+ .+++.+++++++++.+.+.|+++|+.+..+. +
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 314 (393)
T 2huf_A 235 KVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRL 314 (393)
T ss_dssp SCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBC
T ss_pred ceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccccC
Confidence 0 01124455566666667765333 3778889999999999999998888877653 3
Q ss_pred eEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 397 TYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
++++++.+.. +. +..+++++|++++||.+.||..|
T Consensus 315 ~~~~~~~~~~-~~-~~~~~~~~L~~~~gi~v~~g~~~ 349 (393)
T 2huf_A 315 STVTTIKVPQ-GV-DWLKAAQYAMKTYLVEISGGLGP 349 (393)
T ss_dssp TTEEEEECCT-TC-CHHHHHHHHHHHHCEECBCCCGG
T ss_pred CcEEEEEcCC-CC-CHHHHHHHHHHhCCEEEecCccc
Confidence 5466666632 22 57789998987779999998754
No 99
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=3.6e-31 Score=262.36 Aligned_cols=294 Identities=18% Similarity=0.178 Sum_probs=219.2
Q ss_pred CeeEeCCCCCCCC---CcHHHHHHHHHHHHcCCCCC--CCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 110 GAINLGQGFPNFD---GPDFVKDAAIQAIRDGKNQY--ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 110 ~~i~l~~g~p~~~---~~~~v~~~~~~~~~~~~~~Y--~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
..+||..+++..+ .+|.+.+++.+++.+..+.+ .+..-..++++.+++++ | ++ ++++++|+++++.
T Consensus 37 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g----~~-~v~~~~~gt~a~~ 107 (392)
T 3ruy_A 37 RYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT----N----KE-MVLPMNTGAEAVE 107 (392)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH----T----CS-EEEEESSHHHHHH
T ss_pred EEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc----C----CC-EEEEeCcHHHHHH
Confidence 5789887755444 57889999998886533221 11223345566655554 3 55 8999999999999
Q ss_pred HHHHHccCC----------CCeEEEcCCCchhHHHHHHHcCCE-------------EEEEEcCCCCCCCCHHHHHhhccc
Q 013883 185 ATILGLINP----------GDEVILFAPFYDSYEATLSMAGAK-------------IKCITLRPPDFAIPIEELKSTISK 241 (434)
Q Consensus 185 ~~~~~l~~~----------gd~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~d~~~l~~~i~~ 241 (434)
.++..+..+ +|+|++..|+|+++...+...+.. +..++.+ |++.+++++++
T Consensus 108 ~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~l~~~l~~ 181 (392)
T 3ruy_A 108 TAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG------DLEALKAAITP 181 (392)
T ss_dssp HHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT------CHHHHHHHCCT
T ss_pred HHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc------cHHHHHHHhcc
Confidence 999877644 689999999998776555444322 4444432 79999999998
Q ss_pred CCcEEEecCCCCCcccCCCHHH-HHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc
Q 013883 242 NTRAILMNTPHNPTGKMFTREE-LNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG 320 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~~~~~e~-l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 320 (434)
++++|++++|+||||.+++.++ +++|+++|++||+++|+||+|.+|.+.+......... ...+ +.+|||.++ +|
T Consensus 182 ~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~d---~~~~SK~l~-gG 256 (392)
T 3ruy_A 182 NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDN-VTPD---MYILGKALG-GG 256 (392)
T ss_dssp TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGT-CCCS---EEEECGGGG-TT
T ss_pred CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccC-CCCC---EEEEchhhh-CC
Confidence 9999999999999999996555 9999999999999999999999887665543322221 1122 337899886 56
Q ss_pred -ceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC---CEeecCCe
Q 013883 321 -WKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG---FKVFPSSG 396 (434)
Q Consensus 321 -~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---~~~~~~~~ 396 (434)
+|+||+++++++++.+.......+++.+.+.+.++..+|+..++ ++.+++++++++.+.+.|++++ +...++.+
T Consensus 257 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 334 (392)
T 3ruy_A 257 VFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEE--EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKG 334 (392)
T ss_dssp TSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEET
T ss_pred hhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeee
Confidence 99999999999887776666666788999999999999986332 6678889999999999999875 44555667
Q ss_pred eEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 397 TYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+++.|. +.. +..+++++|. ++||.+.||.
T Consensus 335 ~~~~~~-~~~----~~~~l~~~l~-~~gi~v~~~~ 363 (392)
T 3ruy_A 335 LFIGIE-LNE----PARPYCEQLK-AAGLLCKETH 363 (392)
T ss_dssp TEEEEE-ESS----CSHHHHHHHH-TTTEECCCBT
T ss_pred eEEEEE-Ecc----hHHHHHHHHH-HCCcEEecCC
Confidence 766554 533 4678888887 5699999985
No 100
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.97 E-value=3.3e-31 Score=260.81 Aligned_cols=291 Identities=15% Similarity=0.150 Sum_probs=217.8
Q ss_pred CeeEeCCCCC--CCC-CcHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 110 GAINLGQGFP--NFD-GPDFVKDAAIQAIRDG---KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 110 ~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
..+||+.|.| .+. +++.+.+++.+++.+. ...|+ ..+..+|++++++++ |. ++ +|++++|+++++
T Consensus 29 ~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~l~~~la~~~----g~---~~-~v~~~~g~t~a~ 99 (375)
T 2eh6_A 29 EYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYE-NPWQEELAHKLVKHF----WT---EG-KVFFANSGTESV 99 (375)
T ss_dssp EEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTBC-CHHHHHHHHHHHHTS----SS---CE-EEEEESSHHHHH
T ss_pred EEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCcccC-CHHHHHHHHHHHhhc----CC---CC-eEEEeCchHHHH
Confidence 5789988854 455 7888999998888653 23563 346678888888775 33 35 899999999999
Q ss_pred HHHHHH---cc---CCC-CeEEEcCCCchhHHHHHHHcCCE-------------EEEEEcCCCCCCCCHHHHHhhcccCC
Q 013883 184 AATILG---LI---NPG-DEVILFAPFYDSYEATLSMAGAK-------------IKCITLRPPDFAIPIEELKSTISKNT 243 (434)
Q Consensus 184 ~~~~~~---l~---~~g-d~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~d~~~l~~~i~~~~ 243 (434)
.+++.. +. ++| |+|++++|+|+.+...+...+.. +..++. .|++.+++++++++
T Consensus 100 ~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~ 173 (375)
T 2eh6_A 100 EAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL------NDIDSVYKLLDEET 173 (375)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT------TCHHHHHTTCCTTE
T ss_pred HHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC------chHHHHHHHhcCCe
Confidence 999865 35 788 99999999999876655444322 333332 48999999998889
Q ss_pred cEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccce
Q 013883 244 RAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWK 322 (434)
Q Consensus 244 ~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R 322 (434)
++|++++|+||||.+ .+.+++++|+++|++||+++|+||+|.+|.+.+....+..+.. ..+++ ||||.++ +|+|
T Consensus 174 ~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~d~~---s~SK~~~-~g~~ 248 (375)
T 2eh6_A 174 AGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNL-KPDVI---ALAKGLG-GGVP 248 (375)
T ss_dssp EEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEE---EECGGGG-TTSC
T ss_pred EEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCC-CCCEE---EEccccc-CCCC
Confidence 999999999999998 5688899999999999999999999998755443222333221 12222 8899999 7999
Q ss_pred eeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEee
Q 013883 323 IGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVV 402 (434)
Q Consensus 323 ~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 402 (434)
+||+++++++++.++......+++.+.+.+.++..+|+..+ +.+++++++++.+.+.|++++....++ .++++|+
T Consensus 249 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~-~g~~~~~ 323 (375)
T 2eh6_A 249 IGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVE----KLLPHVREVGNYFKEKLKELGKGKVKG-RGLMLGL 323 (375)
T ss_dssp CEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTTSSEEEE-ETTEEEE
T ss_pred eEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCceE-EEEEEEE
Confidence 99999998877666543233466778888888888887522 667888889999999998887544444 4556777
Q ss_pred ecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 403 DHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 403 ~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
++.. +..+++++|++ +||.+.|+
T Consensus 324 ~~~~----~~~~~~~~l~~-~gi~~~~~ 346 (375)
T 2eh6_A 324 ELER----ECKDYVLKALE-KGLLINCT 346 (375)
T ss_dssp ECSS----CCHHHHHHHHH-TTEECEEE
T ss_pred EEcC----cHHHHHHHHHH-CCCEEecC
Confidence 7643 35678888875 69999985
No 101
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.97 E-value=2.1e-30 Score=256.89 Aligned_cols=289 Identities=15% Similarity=0.177 Sum_probs=218.1
Q ss_pred CCCcHHHHHHHHHHHHcCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEE
Q 013883 121 FDGPDFVKDAAIQAIRDGKNQYARG--HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVI 198 (434)
Q Consensus 121 ~~~~~~v~~~~~~~~~~~~~~Y~~~--~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl 198 (434)
.+.++.+.+++.+.+. ..|.+. ....++|++++++++ .+++.+|++++|+++++..++.+++++||+|+
T Consensus 27 ~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl 97 (396)
T 2ch1_A 27 SNCSKRVLTAMTNTVL---SNFHAELFRTMDEVKDGLRYIFQ------TENRATMCVSGSAHAGMEAMLSNLLEEGDRVL 97 (396)
T ss_dssp CCCCHHHHHHTTSCCC---CTTCHHHHHHHHHHHHHHHHHHT------CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEE
T ss_pred CCCCHHHHHHhccccc---cCCChhHHHHHHHHHHHHHHHhC------CCCCcEEEECCcHHHHHHHHHHHhcCCCCeEE
Confidence 4455666665543321 235432 125788888888886 33332699999999999999999999999999
Q ss_pred EcCCCchhHH--HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcC
Q 013883 199 LFAPFYDSYE--ATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIEND 275 (434)
Q Consensus 199 v~~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~ 275 (434)
+++|+|+.+. ..++..|++++.++.++ ++.+|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~ 173 (396)
T 2ch1_A 98 IAVNGIWAERAVEMSERYGADVRTIEGPP-DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQHD 173 (396)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCT-TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHTT
T ss_pred EEcCCcccHHHHHHHHHcCCceEEecCCC-CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHHcC
Confidence 9999999985 47788999999999875 678999999999988 8999999999999999997 677999999999
Q ss_pred cEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHh---------------
Q 013883 276 VLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAH--------------- 340 (434)
Q Consensus 276 ~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~--------------- 340 (434)
+++|+||+|.. +..... +.. .+..+++.|++|.++ .+.++|++++++++++.+...+
T Consensus 174 ~~li~Dea~~~---g~~~~~---~~~-~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (396)
T 2ch1_A 174 CLLIVDAVASL---CGVPFY---MDK-WEIDAVYTGAQKVLG-APPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGN 245 (396)
T ss_dssp CEEEEECTTTB---TTBCCC---TTT-TTCCEEECCCC-CCC-CCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHH
T ss_pred CEEEEEccccc---cCCccc---hhh-cCcCEEEEcCCcccc-CCCCeEEEEECHHHHHhhhhccCcccceEechHHHHH
Confidence 99999999983 211112 211 223466789999876 4456799999998887664310
Q ss_pred --------hccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCee----EEEeeecCCC
Q 013883 341 --------SFLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGT----YFVVVDHTPF 407 (434)
Q Consensus 341 --------~~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~~~~~~ 407 (434)
.....+.+...+.++..+|+.. ++++++++++++++++.+.+.|+++|+++.+++++ .++++.++ .
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~ 324 (396)
T 2ch1_A 246 YWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIP-K 324 (396)
T ss_dssp HTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECC-T
T ss_pred hhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcC-C
Confidence 1123456777888888888763 34577889999999999999999889888877653 25666653 2
Q ss_pred CCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 408 GHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 408 ~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+. +..+++++|++++||.+.||..
T Consensus 325 ~~-~~~~~~~~L~~~~gi~v~~g~~ 348 (396)
T 2ch1_A 325 GV-DWWKVSQYAMNNFSLEVQGGLG 348 (396)
T ss_dssp TC-CHHHHHHHHHHHHCBCCBCCCG
T ss_pred CC-CHHHHHHHHHHhCCEEEecCcc
Confidence 22 5778999998777999999864
No 102
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.97 E-value=3.2e-30 Score=257.12 Aligned_cols=297 Identities=13% Similarity=0.067 Sum_probs=219.6
Q ss_pred cCCeeEeCCC-CCCCCCcHHHHHHHHHHHHcC---CCCCCCCC----CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCCh
Q 013883 108 KHGAINLGQG-FPNFDGPDFVKDAAIQAIRDG---KNQYARGH----GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGC 179 (434)
Q Consensus 108 ~~~~i~l~~g-~p~~~~~~~v~~~~~~~~~~~---~~~Y~~~~----G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~ 179 (434)
+...+||+.+ +.++++++.+.+++.+++.+. ...|.... ...+++++++++++ .+..+++ +++
T Consensus 58 g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~-~sG 128 (409)
T 3kki_A 58 SPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG--------FDECLLS-QSG 128 (409)
T ss_dssp CTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT--------CSEEEEE-SCH
T ss_pred CCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC--------CCeEEEe-cch
Confidence 3457899876 456778899999999998762 12222222 34567777777764 2224555 455
Q ss_pred HHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccC
Q 013883 180 TEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKM 258 (434)
Q Consensus 180 ~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~ 258 (434)
++++..++.+++++||.|++++|+|..+...+...|++++.++. .|++++++++++ ++++|++++|+||||.+
T Consensus 129 t~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~vi~~~~~nptG~~ 202 (409)
T 3kki_A 129 WNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH------NNCDHLRMLIQRHGPGIIVVDSIYSTLGTI 202 (409)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT------TCHHHHHHHHHHHCSCEEEEESBCTTTCCB
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC------CCHHHHHHHHHhcCCeEEEECCCCCCCCCc
Confidence 79999999999999999999999999999999999999988765 479999999986 58999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccC-CCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHH
Q 013883 259 FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIAS-LPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVR 337 (434)
Q Consensus 259 ~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~ 337 (434)
++ +++|+++|++||+++|+||+|..+.++........ +....+.++++.||||.++.+ .||+++++++++.+.
T Consensus 203 ~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~ 276 (409)
T 3kki_A 203 AP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVP 276 (409)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHH
T ss_pred CC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHH
Confidence 97 77899999999999999999998655432222111 111223458899999999955 499999999888776
Q ss_pred HHhhcc--ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHH
Q 013883 338 QAHSFL--TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAF 415 (434)
Q Consensus 338 ~~~~~~--~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (434)
...... ....+...+.++.++|+..++ .++++++++++++++.+.|+++|+.+. + .++++|+.+... .+..++
T Consensus 277 ~~~~~~~~~~~~~~~~~aa~~aal~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~-~-~~~~~~~~~~~~--~~~~~~ 351 (409)
T 3kki_A 277 FISYPAIFSSTLLPYEAAGLETTLEIIES-ADNRRQHLDRMARKLRIGLSQLGLTIR-S-ESQIIGLETGDE--RNTEKV 351 (409)
T ss_dssp HHCHHHHHSBCCCHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHTTTCCCC-C-SSSEEEEEEESH--HHHHHH
T ss_pred HhCcCccccCCCcHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCCccC-C-CCCEEEEEeCCH--HHHHHH
Confidence 643322 223455566666667765332 267788999999999999999998876 3 455666665321 135578
Q ss_pred HHHHHHhcCeEEECCC
Q 013883 416 CEYLIKEVGVVAIPTS 431 (434)
Q Consensus 416 ~~~Ll~~~GV~v~pG~ 431 (434)
+++|+++ ||.+.|+.
T Consensus 352 ~~~L~~~-Gv~v~~~~ 366 (409)
T 3kki_A 352 RDYLESN-GVFGSVFC 366 (409)
T ss_dssp HHHHHHT-TEECEEEC
T ss_pred HHHHHHC-CceEeeeC
Confidence 8888776 99998753
No 103
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.97 E-value=4.4e-30 Score=251.23 Aligned_cols=301 Identities=14% Similarity=0.146 Sum_probs=223.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC-C-CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYAR-G-HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~-~-~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
++++|+.| | ...++.+.+++.+.+ .+.|+. . .+..++|++++++++ ...+++ ++++++|+++++..++
T Consensus 4 ~~~~~~~g-p-~~~~~~v~~a~~~~~---~~~~~~~~~~~~~~l~~~la~~~g----~~~~~~-~v~~~~g~t~a~~~~~ 73 (366)
T 1m32_A 4 NYLLLTPG-P-LTTSRTVKEAMLFDS---CTWDDDYNIGVVEQIRQQLTALAT----ASEGYT-SVLLQGSGSYAVEAVL 73 (366)
T ss_dssp -CEECSSS-S-CCCCHHHHHTTCCCC---CTTSHHHHTTTHHHHHHHHHHHHC----SSSSEE-EEEEESCHHHHHHHHH
T ss_pred ccccccCC-C-cCCCHHHHHHHhhhh---cCCCHHHHHHHHHHHHHHHHHHhC----CCCcCc-EEEEecChHHHHHHHH
Confidence 36899988 5 346777777765532 122321 1 577899999999885 112234 7999999999999999
Q ss_pred HHccCCCCeEEEcC-CCchh-HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--CCcEEEecCCCCCcccCCCHHH
Q 013883 188 LGLINPGDEVILFA-PFYDS-YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK--NTRAILMNTPHNPTGKMFTREE 263 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~-p~y~~-~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~~~i~~~~p~NPTG~~~~~e~ 263 (434)
.+++++||+|++.+ ++|+. +...+...|++++.++.++ ++.+|++.+++++++ ++++|++++|+||||.+++
T Consensus 74 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~--- 149 (366)
T 1m32_A 74 GSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE-VARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP--- 149 (366)
T ss_dssp HHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT-TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---
T ss_pred HHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC---
Confidence 99999999988876 55554 6677888999999999874 677999999999976 5789999999999999997
Q ss_pred HHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHh---
Q 013883 264 LNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAH--- 340 (434)
Q Consensus 264 l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~--- 340 (434)
+++|.++|++||+++|+||+|..... ... +. ..+.++++.|++|.++ .+.++||+++++++++.++...
T Consensus 150 l~~i~~l~~~~~~~li~Dea~~~~~~---~~~---~~-~~~~di~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~ 221 (366)
T 1m32_A 150 IDEVGALAHRYGKTYIVDAMSSFGGI---PMD---IA-ALHIDYLISSANKCIQ-GVPGFAFVIAREQKLAACKGHSRSL 221 (366)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTS---CCC---TT-TTTCSEEEEESSSTTC-CCSSEEEEEEEHHHHTTCTTCCSCS
T ss_pred HHHHHHHHHHcCCEEEEECCccccCc---Ccc---cc-ccCccEEEecCccccc-CCCceEEEEECHHHHHhhcCCCCCc
Confidence 67899999999999999999985432 111 11 1245689999999874 3345799999988776543210
Q ss_pred ---------------hccccCCchHHHHHHHHHHhCChHH--HHHHHHHHHHHHHHHHHHhhhCCCEeecC---CeeEEE
Q 013883 341 ---------------SFLTFATSTPMQWAATAALRAPETY--YEELKRDYSAKKAILVEGLNAVGFKVFPS---SGTYFV 400 (434)
Q Consensus 341 ---------------~~~~~~~~~~~q~a~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~~~ 400 (434)
....++.+...+.++..+|+...++ +++++++++++++.+.+.|+++|+.+..+ .+++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 301 (366)
T 1m32_A 222 SLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIIT 301 (366)
T ss_dssp TTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEE
T ss_pred cccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccCchhcCceEE
Confidence 0112567777777788888764444 67788999999999999999888877654 366677
Q ss_pred eeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 401 VVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
|+.++.....+..+++++|.++ ||.+.||..|
T Consensus 302 ~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~~~ 333 (366)
T 1m32_A 302 AFYSPEDPQYRFSEFYRRLKEQ-GFVIYPGKVS 333 (366)
T ss_dssp EEECCCCTTCCHHHHHHHHHHT-TEECEECCCS
T ss_pred EEEcCccCCCCHHHHHHHHHHC-CEEEECCcCC
Confidence 8876421012577898888766 9999998754
No 104
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.97 E-value=3.5e-30 Score=254.88 Aligned_cols=296 Identities=13% Similarity=0.062 Sum_probs=214.9
Q ss_pred eEeCCCCCCCCCcHHHHHHHHHHHHcCCCCC-CCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc
Q 013883 112 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQY-ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL 190 (434)
Q Consensus 112 i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y-~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l 190 (434)
+.|..+.| .+.++.+.+++.+.+.. +.| ....+..++|++++++++ .+++ +|++|+|+++++.+++.++
T Consensus 10 ~yl~~~~~-~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g------~~~~-~v~~t~g~t~a~~~~~~~~ 79 (392)
T 2z9v_A 10 VITLTAGP-VNAYPEVLRGLGRTVLY--DYDPAFQLLYEKVVDKAQKAMR------LSNK-PVILHGEPVLGLEAAAASL 79 (392)
T ss_dssp SEECSSSC-CCCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHTT------CSSC-CEEESSCTHHHHHHHHHHH
T ss_pred ceeecCCC-cCCCHHHHHHHhccccc--cccHHHHHHHHHHHHHHHHHhC------CCCC-EEEEeCCchHHHHHHHHHh
Confidence 44544433 34567777766554432 111 112234567777777664 3456 8999999999999999999
Q ss_pred cCCCCeEEEcCCCchhH--HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc--cCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 191 INPGDEVILFAPFYDSY--EATLSMAGAKIKCITLRPPDFAIPIEELKSTIS--KNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 191 ~~~gd~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~--~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
+++||+|++++|+|+++ ...++..|++++.+++++ ++.+|++.++++++ +++++|++++|+||||.+++ +++
T Consensus 80 ~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~ 155 (392)
T 2z9v_A 80 ISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY-NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDA 155 (392)
T ss_dssp CCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT-TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHH
T ss_pred cCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCC-CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHH
Confidence 99999999999999876 344566899999999875 56799999999994 57899999999999999997 567
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc-cccceeeeEEeChhhHHHHHHHh-----
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIAPPHLTWGVRQAH----- 340 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~~~~~~~~l~~~~----- 340 (434)
|.++|++||+++|+||+|.... ....+.. .+..+++.|++|.++ .+| +||+++++++++.++...
T Consensus 156 i~~l~~~~~~~li~D~a~~~g~---~~~~~~~----~~~d~~~~s~sK~~~~~~g--~G~l~~~~~~~~~l~~~~~g~~~ 226 (392)
T 2z9v_A 156 IGALVSAHGAYLIVDAVSSFGG---MKTHPED----CKADIYVTGPNKCLGAPPG--LTMMGVSERAWAKMKANPLAPRA 226 (392)
T ss_dssp HHHHHHHTTCEEEEECTTTBTT---BSCCGGG----GTCSEEEECSSSTTCCCSC--CEEEEECHHHHHHHHTCTTSCCS
T ss_pred HHHHHHHcCCeEEEEcccccCC---ccccccc----ccceEEEecCcccccCCCc--eeEEEECHHHHHHhhhccCCCCc
Confidence 9999999999999999997421 1111211 134588999999654 445 699999999888776421
Q ss_pred ---------------hccccCCchHHHHHHHHHHhCChHH-HHHHHHHHHHHHHHHHHHhhhCCCEeec-CC---eeEEE
Q 013883 341 ---------------SFLTFATSTPMQWAATAALRAPETY-YEELKRDYSAKKAILVEGLNAVGFKVFP-SS---GTYFV 400 (434)
Q Consensus 341 ---------------~~~~~~~~~~~q~a~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~---~~~~~ 400 (434)
.....+.+...+.++..+|+...++ +++++++++++++.+.+.|+++|+.+.. +. .+.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 306 (392)
T 2z9v_A 227 SMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTT 306 (392)
T ss_dssp STTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEE
T ss_pred eeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceE
Confidence 1112344555566666677654444 6788899999999999999888888766 32 34566
Q ss_pred eeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 401 VVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
++.++. +. +..+++++|.+++||.+.||..
T Consensus 307 ~~~~~~-~~-~~~~l~~~L~~~~gi~v~~g~~ 336 (392)
T 2z9v_A 307 AVRTPD-GV-DEKALRQAARARYGVVFSSGRG 336 (392)
T ss_dssp EEECCT-TC-CHHHHHHHHHHHHCEECEECCG
T ss_pred EEECCC-CC-CHHHHHHHHHhcCCEEEecCCC
Confidence 666531 22 5778999887767999999864
No 105
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.97 E-value=1.8e-29 Score=248.94 Aligned_cols=292 Identities=15% Similarity=0.097 Sum_probs=211.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+++|++.+.++.+.++.+.+++. .|. +...+++.+++.+.+.+|.+ +++ ++++++|+++++..++.+
T Consensus 29 ~v~~~~~~~~~~~~~~~v~~a~~--------~~~---~~~~~~~~~~~~~a~~~g~~-~~~-~~~~~~ggt~a~~~~~~~ 95 (374)
T 2aeu_A 29 ALYDLSGLSGGFLIDEKDKALLN--------TYI---GSSYFAEKVNEYGLKHLGGD-END-KCVGFNRTSSAILATILA 95 (374)
T ss_dssp GCEECSSCCCCCCCCHHHHHHHT--------STT---HHHHHHHHHHHHHHHHHTCC-TTE-EEEEESSHHHHHHHHHHH
T ss_pred ceeeecccCCCCCCCHHHHHHHH--------Hhc---CchHHHHHHHHHHHHHhCCC-Ccc-eEEEEcChHHHHHHHHHh
Confidence 57899998888888888888764 121 11455677777776666653 345 799999999999999998
Q ss_pred ccCCCCeEEEcCCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcE-EEecCCCCCcccCCCHHHHH
Q 013883 190 LINPGDEVILFAPFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRA-ILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~-i~~~~p~NPTG~~~~~e~l~ 265 (434)
+ +||+|+++.|+|+++.. .+...|++++.+ .|++.++++ ++++++ |++++||||||. +.++++
T Consensus 96 ~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v--------~d~~~l~~~-~~~~~~~v~~~~p~nptG~--~~~~l~ 162 (374)
T 2aeu_A 96 L--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES--------DKVGEILNK-IDKDTLVIITGSTMDLKVI--ELENFK 162 (374)
T ss_dssp H--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE--------SCHHHHHTT-CCTTEEEEEECBCTTSCBC--CHHHHH
T ss_pred C--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe--------CCHHHHHhc-CCCccEEEEEccCCCCCCC--CcccHH
Confidence 8 99999999998776433 677889999887 278999998 778999 999999999997 778999
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT 344 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~ 344 (434)
+|.++|++||+++|+||+|..+..+.. ...... .+.++++.|+||.+ +|+|+||+++++++++.++..+....
T Consensus 163 ~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~----~~~di~~~S~sK~l--~g~~~G~~~~~~~~~~~l~~~~~~~~ 236 (374)
T 2aeu_A 163 KVINTAKNKEAIVFVDDASGARVRLLFNQPPALK----LGADLVVTSTDKLM--EGPRGGLLAGKKELVDKIYIEGTKFG 236 (374)
T ss_dssp HHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHH----HTCSEEEEETTSSS--SSCSCEEEEEEHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHcCCEEEEECCcccccccccccCCccc----cCCcEEEecCcccc--cCcceEEEEECHHHHHHHHHhhcccc
Confidence 999999999999999999987642101 100111 12358899999985 47899999999999999888776555
Q ss_pred cCCchHHHHHHHHHHhCChH-HHHHHHHHHHHH----HHHHHHHhhhC----CCEee-cCCeeEEEeeecCCC-CCCCHH
Q 013883 345 FATSTPMQWAATAALRAPET-YYEELKRDYSAK----KAILVEGLNAV----GFKVF-PSSGTYFVVVDHTPF-GHETDI 413 (434)
Q Consensus 345 ~~~~~~~q~a~~~~L~~~~~-~~~~~~~~~~~~----~~~l~~~L~~~----g~~~~-~~~~~~~~~~~~~~~-~~~~~~ 413 (434)
.+.+.+.+.++..+|+.... .+++..+..+.. ++.+.+.|... |+.+. .+.|.+++|.+.... ...++.
T Consensus 237 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~ 316 (374)
T 2aeu_A 237 LEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLI 316 (374)
T ss_dssp CBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecccccccccchH
Confidence 56788889898888886422 222222222222 46666666553 66664 566666667654210 000122
Q ss_pred HHHHHHHHhcCeEEECCCCC
Q 013883 414 AFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 414 ~~~~~Ll~~~GV~v~pG~~F 433 (434)
+++.++++++||.+.||..|
T Consensus 317 ~~~~~ll~~~gV~v~~g~~~ 336 (374)
T 2aeu_A 317 EIGFNLLKNYGIITITVAGM 336 (374)
T ss_dssp HHHHHHHHHHCEECSTTSSS
T ss_pred HHHHHHHHhCCEEEecCCCC
Confidence 37777888889999999765
No 106
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.97 E-value=6.1e-30 Score=249.55 Aligned_cols=296 Identities=14% Similarity=0.112 Sum_probs=213.2
Q ss_pred cCCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 108 KHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 108 ~~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
.++.|||+.+.+ ..+++.+.+++.+++.. |...+|..++++++.+++.+.+| . +. +|++++|+++++..++
T Consensus 6 ~~~~id~~~~~~-~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~l~~~la~~~g-~--~~-~v~~~~~gt~a~~~al 76 (356)
T 1v72_A 6 RPPALGFSSDNI-AGASPEVAQALVKHSSG----QAGPYGTDELTAQVKRKFCEIFE-R--DV-EVFLVPTGTAANALCL 76 (356)
T ss_dssp CCCCCBCSCGGG-CCCCHHHHHHHHHTTSS----CCCSTTCSHHHHHHHHHHHHHHT-S--CC-EEEEESCHHHHHHHHH
T ss_pred CCceEeeccCCc-cCCCHHHHHHHHhhccC----cccccccchHHHHHHHHHHHHhC-C--CC-cEEEeCCccHHHHHHH
Confidence 347889998755 45678888888776532 22233334555556666655555 2 33 6999999999999999
Q ss_pred HHccCCCCeEEEcCCCchhHHHH--HHHc--CCEEEEEEcCCCCCCCCHHHHHh-hccc-------CCcEEEecCCCCCc
Q 013883 188 LGLINPGDEVILFAPFYDSYEAT--LSMA--GAKIKCITLRPPDFAIPIEELKS-TISK-------NTRAILMNTPHNPT 255 (434)
Q Consensus 188 ~~l~~~gd~Vlv~~p~y~~~~~~--~~~~--G~~~~~v~~~~~~~~~d~~~l~~-~i~~-------~~~~i~~~~p~NPT 255 (434)
.+++++||+|+++.|+|..+... +... |++++.+|.+ ++.+|++.+++ ++++ ++++|++++||| |
T Consensus 77 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-t 153 (356)
T 1v72_A 77 SAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP--AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-V 153 (356)
T ss_dssp HTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG--GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-T
T ss_pred HHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC--CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-C
Confidence 99999999999999999887665 7777 9999988875 57899999999 8875 578999999987 9
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCcccc--CCCCccccCCCCCCCceEEEccCChhhccccceee--eEEeChh
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDKLAF--EMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIG--WAIAPPH 331 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~--~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G--~~~~~~~ 331 (434)
|.+++.+++++|+++|++||+++|+|++|..+.. .+.......+.. ... +++.|+||. | .|+| |++++++
T Consensus 154 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~-~~d-~~~~s~sK~-g---~~~G~g~~~~~~~ 227 (356)
T 1v72_A 154 GSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKA-GVD-ALSFGATKN-G---VLAAEAIVLFNTS 227 (356)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGG-TCC-EEEECCGGG-T---CSSCEEEEESSGG
T ss_pred CccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhh-cCC-EEEEecccC-C---CcCccEEEEECHH
Confidence 9999999999999999999999999999986532 121111111111 122 445689998 4 2555 8888999
Q ss_pred hHHHHHHHhhccc-cCC-chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCC
Q 013883 332 LTWGVRQAHSFLT-FAT-STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFG 408 (434)
Q Consensus 332 ~~~~l~~~~~~~~-~~~-~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~ 408 (434)
++++++..+.... ... ....+.++...+++ . ...+..++++++++.+.+.|+++ |+++..+.+++++|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~--- 302 (356)
T 1v72_A 228 LATEMSYRRKRAGHLSSKMRFLSAQIDAYLTD-D-LWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD--- 302 (356)
T ss_dssp GHHHHHHHHHHTTCCCSSTHHHHHHHHHHTST-T-HHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC---
T ss_pred HHhhHHHHhhccCchhhhHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC---
Confidence 9888776543222 122 22333333444543 2 33455777888999999999885 888877777778888762
Q ss_pred CCCHHHHHHHHHHhcCeEEECCC
Q 013883 409 HETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 409 ~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
.+++++|.+ +||.+.||.
T Consensus 303 ----~~~~~~l~~-~gi~v~~g~ 320 (356)
T 1v72_A 303 ----SAMIDALLK-AGFGFYHDR 320 (356)
T ss_dssp ----HHHHHHHHH-TTCBCBCSS
T ss_pred ----HHHHHHHHh-cCeEEeccc
Confidence 378888865 599999986
No 107
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=1.3e-29 Score=250.45 Aligned_cols=294 Identities=12% Similarity=0.070 Sum_probs=218.6
Q ss_pred CCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCC------
Q 013883 120 NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINP------ 193 (434)
Q Consensus 120 ~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~------ 193 (434)
..++++.+.+++.+++......|....+..++++++.+++.+.+|. +++ +|++++|+++++..++.++..+
T Consensus 39 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~-~i~~~~ggt~a~~~~~~~~~~~~~~~~~ 115 (397)
T 3f9t_A 39 CSNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNN--KDA-YGHIVSGGTEANLMALRCIKNIWREKRR 115 (397)
T ss_dssp CCCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTC--TTC-EEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCC--CCC-CEEEecCcHHHHHHHHHHHHHHHHhhhh
Confidence 3445677888888887653333322225567777888888877775 456 8999999999999999998776
Q ss_pred -------CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHH
Q 013883 194 -------GDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 194 -------gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
||+|+++.|+|+.+...+...|++++.+|.++ ++.+|++.+++++++ ++++|++++|+||||.+.+ ++
T Consensus 116 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~ 191 (397)
T 3f9t_A 116 KGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE-DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IE 191 (397)
T ss_dssp TTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT-TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HH
T ss_pred hcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC-CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HH
Confidence 99999999999999999999999999999975 688999999999998 8999999999999999985 67
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCCc--c------ccCCCCCCCceEEEccCChhhccccceeeeEEeChh-hHHHH
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDHI--S------IASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH-LTWGV 336 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~~--~------~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~-~~~~l 336 (434)
+|.++|++||+++|+||+|..+.++.... . ...+. . +..+++.|++|.++ +|.|+|+++++++ +.+.+
T Consensus 192 ~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~ 268 (397)
T 3f9t_A 192 ELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFS-L-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYL 268 (397)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGG-G-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGT
T ss_pred HHHHHHHHhCCeEEEEccccchhhhhccccccccccccccccc-c-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhh
Confidence 79999999999999999998765432110 0 01111 1 44688999999876 7889999998654 43332
Q ss_pred HHHhhccc-----------cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecC
Q 013883 337 RQAHSFLT-----------FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHT 405 (434)
Q Consensus 337 ~~~~~~~~-----------~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 405 (434)
+....+.. .+.+...+.++...+. ..++++..++++++++.+.+.|++.|+.+..+..+.++++.+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 346 (397)
T 3f9t_A 269 DVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG--REGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDE 346 (397)
T ss_dssp CEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECT
T ss_pred ccCCccccCCCccccccccccchHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeC
Confidence 21111111 1124455666666564 4467778888899999999999998888554443445555543
Q ss_pred CCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 406 PFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 406 ~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+..++.++|.++ ||.+.||.
T Consensus 347 -----~~~~~~~~l~~~-gi~v~~~~ 366 (397)
T 3f9t_A 347 -----DYKEVCKKLRDR-GIYVSVCN 366 (397)
T ss_dssp -----THHHHHHHHHHT-TCBCEECS
T ss_pred -----CHHHHHHHHHhC-CeEEeccC
Confidence 267888888765 99999986
No 108
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.97 E-value=3.7e-30 Score=250.74 Aligned_cols=284 Identities=15% Similarity=0.099 Sum_probs=210.8
Q ss_pred CCCcHHHHHHHHHHHHcCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEE
Q 013883 121 FDGPDFVKDAAIQAIRDGKNQYA-RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVIL 199 (434)
Q Consensus 121 ~~~~~~v~~~~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv 199 (434)
.++++.+.+++.+.+.. +.|. ...+..++|++++++++ ++++ ++++++|+++++..++.+++++||+|++
T Consensus 10 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g------~~~~-~i~~~~g~t~a~~~~~~~~~~~gd~vl~ 80 (352)
T 1iug_A 10 VRLHPKALEALARPQLH--HRTEAAREVFLKARGLLREAFR------TEGE-VLILTGSGTLAMEALVKNLFAPGERVLV 80 (352)
T ss_dssp CCCCHHHHHHHHSCCCC--TTSHHHHHHHHHHHHHHHHHHT------CSSE-EEEEESCHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCCHHHHHHhccCCCC--ccCHHHHHHHHHHHHHHHHHhC------CCCc-eEEEcCchHHHHHHHHHhccCCCCeEEE
Confidence 34567777777665432 1111 12245678888888775 4455 8999999999999999999999999999
Q ss_pred cCCCchhHH--HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc--C
Q 013883 200 FAPFYDSYE--ATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN--D 275 (434)
Q Consensus 200 ~~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~--~ 275 (434)
++|.|+++. ..+...|++++.++.++ ++.+|++.+++ +++++|++++|+||||.+++ +++|.++|++| |
T Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 153 (352)
T 1iug_A 81 PVYGKFSERFYEIALEAGLVVERLDYPY-GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPE 153 (352)
T ss_dssp EECSHHHHHHHHHHHHTTCEEEEEECCT-TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTT
T ss_pred EeCCchhHHHHHHHHHcCCceEEEeCCC-CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCC
Confidence 999999975 44566899999999875 56788888877 67899999999999999997 56799999999 9
Q ss_pred cEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHH---------HHH----H-hh
Q 013883 276 VLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG---------VRQ----A-HS 341 (434)
Q Consensus 276 ~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~---------l~~----~-~~ 341 (434)
+++|+||+|.... ....+.. .+..+++.|++|.++ .+.++||+++++++++. ++. . ..
T Consensus 154 ~~li~D~a~~~~~---~~~~~~~----~~~d~~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (352)
T 1iug_A 154 GLVGADMVTSLLV---GEVALEA----MGVDAAASGSQKGLM-CPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEG 225 (352)
T ss_dssp CEEEEECTTTBTT---BCCCSGG----GTCSEEEEESSSTTC-CCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTT
T ss_pred CEEEEECCccccC---cceeccc----cCeeEEEecCccccc-CCCceeEEEECHHHHHHhhCCCceeeHHHHHhhcccC
Confidence 9999999997321 1111111 234688999999554 22348999999887654 221 1 12
Q ss_pred ccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCC-eeEEEeeecCCCCCCCHHHHHHHHH
Q 013883 342 FLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSS-GTYFVVVDHTPFGHETDIAFCEYLI 420 (434)
Q Consensus 342 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Ll 420 (434)
....+.+...+.++..+|+..++++++++++++++++.+.+.|+++|+++..+. .+.++|+.+.. +. +..+++++|.
T Consensus 226 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~ 303 (352)
T 1iug_A 226 ESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPE-GV-PYARVKEAFA 303 (352)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCT-TC-CHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCC-CC-CHHHHHHHHH
Confidence 234556777777777777653334788899999999999999998899887764 55567777642 22 5778988887
Q ss_pred HhcCeEEECCC
Q 013883 421 KEVGVVAIPTS 431 (434)
Q Consensus 421 ~~~GV~v~pG~ 431 (434)
++ ||.+.||.
T Consensus 304 ~~-gi~v~~~~ 313 (352)
T 1iug_A 304 QR-GAVIAGGQ 313 (352)
T ss_dssp TT-TEECEECC
T ss_pred HC-CEEEEeCC
Confidence 65 99999986
No 109
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.97 E-value=1.6e-30 Score=253.21 Aligned_cols=295 Identities=20% Similarity=0.205 Sum_probs=207.7
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
+..|+|+.+...+ +++.+++++.++.. ....|.+..+..+||++++++++ .+ ++++++|+++++.+++.
T Consensus 3 ~~~i~~~~~~~~~-p~~~~~~a~~~~~~-~~~~y~~~~~~~~l~~~la~~~g--------~~-~~~~~~~gt~a~~~~~~ 71 (347)
T 1jg8_A 3 HMMIDLRSDTVTK-PTEEMRKAMAQAEV-GDDVYGEDPTINELERLAAETFG--------KE-AALFVPSGTMGNQVSIM 71 (347)
T ss_dssp --CEECSCGGGCC-CCHHHHHHHHTCCC-CCGGGTCCHHHHHHHHHHHHHHT--------CS-EEEEESCHHHHHHHHHH
T ss_pred ceEEEeccccCCC-CCHHHHHHHhcCCC-CCcccCCChHHHHHHHHHHHHhC--------Cc-eEEEecCcHHHHHHHHH
Confidence 3678999986655 55677777654432 22357777788899999999986 23 57777788899999999
Q ss_pred HccCCCCeEEEcCCCchhHH---HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcEEEecCCCCCc-ccC
Q 013883 189 GLINPGDEVILFAPFYDSYE---ATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRAILMNTPHNPT-GKM 258 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~i~~~~p~NPT-G~~ 258 (434)
+++++||+|++++|+|.... ..+...|++++.+ .+ +++.+|++.+++++++ ++++|++++||||| |.+
T Consensus 72 ~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~ 149 (347)
T 1jg8_A 72 AHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRV 149 (347)
T ss_dssp HHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE-ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBC
T ss_pred HhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC-CCCccCHHHHHHHhccccccccCceEEEEeccccccCCcc
Confidence 99999999999999997643 3577789999888 43 3566899999999975 68999999999999 999
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcCcCCccc--cCCCCccccCCCCCCCceEEEccCChhhccccceee-eEEeChhhHHH
Q 013883 259 FTREELNVIASLCIENDVLVFSDEVYDKLA--FEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIG-WAIAPPHLTWG 335 (434)
Q Consensus 259 ~~~e~l~~i~~la~~~~~~iI~Deay~~~~--~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~~~~~~~~~~~ 335 (434)
++.+++++|+++|++||+++|+|++|.... +.+. ....+....+ .++.|+||.++.+ +| |++++++++++
T Consensus 150 ~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d--~~~~s~sK~l~~~---~G~~~~~~~~~~~~ 222 (347)
T 1jg8_A 150 VPLENIKEICTIAKEHGINVHIDGARIFNASIASGV--PVKEYAGYAD--SVMFCLSKGLCAP---VGSVVVGDRDFIER 222 (347)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCC--CHHHHHHTCS--EEEEESSSTTCCS---SCEEEEECHHHHHH
T ss_pred CcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCC--ChHHhccccc--EEEEecccccCCC---ceEEEEcCHHHHHH
Confidence 999999999999999999999999875321 1111 1111111123 2345899999743 67 56778888888
Q ss_pred HHHHhhccccC--CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEee--cCCeeEEEeeecCCCCCCC
Q 013883 336 VRQAHSFLTFA--TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVF--PSSGTYFVVVDHTPFGHET 411 (434)
Q Consensus 336 l~~~~~~~~~~--~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~~~~~~ 411 (434)
++..+.....+ .+...+.++..+|+...+.++ + ..++++.+.+.|+++|+.+. ++.++ |+|+.+...+. +
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~-~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~-~ 296 (347)
T 1jg8_A 223 ARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLK---E-DHENARFLALKLKEIGYSVNPEDVKTN-MVILRTDNLKV-N 296 (347)
T ss_dssp HHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHH---H-HHHHHHHHHHHHHHHTCBCCGGGCCSS-EEEEECTTSSS-C
T ss_pred HHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHH---H-HHHHHHHHHHHHHhcCceeccCCCcce-EEEEEcccccC-C
Confidence 77655433322 244555555666654322222 2 23466777888877677652 34455 57887742222 5
Q ss_pred HHHHHHHHHHhcCeEEECC
Q 013883 412 DIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG 430 (434)
..+++++|.+ +||.+.|+
T Consensus 297 ~~~~~~~l~~-~gi~v~~~ 314 (347)
T 1jg8_A 297 AHGFIEALRN-SGVLANAV 314 (347)
T ss_dssp HHHHHHHHHH-HTEECEEE
T ss_pred HHHHHHHHHH-CCCEEecC
Confidence 7789999865 59999875
No 110
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.97 E-value=2.2e-30 Score=257.65 Aligned_cols=300 Identities=14% Similarity=0.120 Sum_probs=216.9
Q ss_pred CeeEeCCCC---CCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGF---PNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~---p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..+||..+. +--..++.+.+++.+++.+..+.+ .... .+.++++++.+.+.+| .+ +|++++|+++++..+
T Consensus 40 ~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~-~~~~-~~~~~~l~~~la~~~~----~~-~v~~~~gg~~a~~~a 112 (406)
T 4adb_A 40 EYIDFAGGIAVNALGHAHPELREALNEQASKFWHTG-NGYT-NEPVLRLAKKLIDATF----AD-RVFFCNSGAEANEAA 112 (406)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCC-TTSC-CHHHHHHHHHHHHHSS----CS-EEEEESSHHHHHHHH
T ss_pred EEEECCCchhhcccCCCCHHHHHHHHHHHHhccccc-CCcC-CHHHHHHHHHHHhhCC----CC-eEEEeCcHHHHHHHH
Confidence 578888762 211257889999988887632211 1111 2345555555555554 34 799999999999999
Q ss_pred HHHccC-------CC-CeEEEcCCCchhHHHHHHHcCC-------------EEEEEEcCCCCCCCCHHHHHhhcccCCcE
Q 013883 187 ILGLIN-------PG-DEVILFAPFYDSYEATLSMAGA-------------KIKCITLRPPDFAIPIEELKSTISKNTRA 245 (434)
Q Consensus 187 ~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~d~~~l~~~i~~~~~~ 245 (434)
+..++. +| |+|++.+|+|+++.......+. ++..+|.. |++.+++++++++++
T Consensus 113 l~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~l~~~l~~~~~~ 186 (406)
T 4adb_A 113 LKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYN------DINSASALIDDSTCA 186 (406)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTT------CHHHHHTTCSTTEEE
T ss_pred HHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCC------cHHHHHHHhcCCeEE
Confidence 998865 66 9999999999998655554443 34444433 799999999988999
Q ss_pred EEecCCCCCcccCC--CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccccee
Q 013883 246 ILMNTPHNPTGKMF--TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKI 323 (434)
Q Consensus 246 i~~~~p~NPTG~~~--~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~ 323 (434)
|+++ |+||||.++ +.+++++|+++|++||+++|+||+|.+|.+.+....+.... ...+++ ||||.++ +|+|+
T Consensus 187 v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~d~~---t~sK~~~-~G~r~ 260 (406)
T 4adb_A 187 VIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYG-VTPDLL---TTAKALG-GGFPV 260 (406)
T ss_dssp EEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHT-CCCSEE---EECGGGG-TTSCC
T ss_pred EEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcC-CCCCEE---Eechhhc-CCCCe
Confidence 9888 999999988 99999999999999999999999999887665543322222 122333 7899999 99999
Q ss_pred eeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC----CEeecCCeeEE
Q 013883 324 GWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG----FKVFPSSGTYF 399 (434)
Q Consensus 324 G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~ 399 (434)
||+++++++++.+.......+++.+.+.+.++..+|+..++ ++.+++++++++.+.+.|++++ ........+.+
T Consensus 261 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~ 338 (406)
T 4adb_A 261 GALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINT--PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLL 338 (406)
T ss_dssp EEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTE
T ss_pred EEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEE
Confidence 99999999988777666666788999999999988875221 4667777888888888887642 11112223556
Q ss_pred EeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 400 VVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+++.+......+..+++++|+++ ||.+.|+.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~ 369 (406)
T 4adb_A 339 IGCVLNADYAGQAKQISQEAAKA-GVMVLIAG 369 (406)
T ss_dssp EEEEECTTTTTCHHHHHHHHHHT-TEECEESS
T ss_pred EEEEEeCCcHHHHHHHHHHHHHC-CcEEeecC
Confidence 67766432112477899988776 99999874
No 111
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=7.8e-30 Score=253.71 Aligned_cols=296 Identities=16% Similarity=0.097 Sum_probs=220.1
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCC----CCCC----CCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGK----NQYA----RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~----~~Y~----~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
+.+.|..+.+. +.++.+.+++.+.+.+.. ..|. ...+..+++++++++++ .+++ +|++++|+++
T Consensus 26 ~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~-~v~~~~g~t~ 97 (406)
T 3cai_A 26 GWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVN------ADPG-GVVLGADRAV 97 (406)
T ss_dssp SCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHT------CCGG-GEEEESCHHH
T ss_pred CeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCC-eEEEeCChHH
Confidence 46778777665 667888999988876521 1232 12345677888888775 4556 8999999999
Q ss_pred HHHHHHHHc---cCCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCC
Q 013883 182 AIAATILGL---INPGDEVILFAPFYDSYEATLSM----AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNP 254 (434)
Q Consensus 182 ai~~~~~~l---~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NP 254 (434)
++.+++.++ +++||+|+++.|+|+.+...+.. .|++++.++++++++.+|++.+++++++++++|++++|+||
T Consensus 98 al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~np 177 (406)
T 3cai_A 98 LLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGT 177 (406)
T ss_dssp HHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTT
T ss_pred HHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCCceEEEEeCCcCC
Confidence 999999888 78999999999999986555443 79999999988557789999999999989999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceee-eEEeChhhH
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIG-WAIAPPHLT 333 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~~~~~~~~~ 333 (434)
||.+++ +++|.++|+++|+++|+|++|.... ....+.. .+.++++.|++|.+| ++ +| |++++++++
T Consensus 178 tG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~---~~~~~~~----~~~d~~~~s~~K~~g-~~--~G~~~~~~~~~~ 244 (406)
T 3cai_A 178 LGGVTD---LRAMTKLVHDVGALVVVDHSAAAPY---RLLDIRE----TDADVVTVNAHAWGG-PP--IGAMVFRDPSVM 244 (406)
T ss_dssp TCBBCC---CHHHHHHHHHTTCEEEEECTTTTTT---CCCCHHH----HCCSEEEEEGGGGTS-CS--CEEEEESCHHHH
T ss_pred ccccCC---HHHHHHHHHHcCCEEEEEcccccCC---CCCCchh----cCCCEEEeehhhhcC-CC--cCeEEEEehHHH
Confidence 999997 6679999999999999999997421 1111111 235688999999887 54 99 999999887
Q ss_pred HHHHHHhh---------ccccCCchHHHHHHHHHHhCChH---------------HHHHHHHHHHHHHHHHHHHhhhC-C
Q 013883 334 WGVRQAHS---------FLTFATSTPMQWAATAALRAPET---------------YYEELKRDYSAKKAILVEGLNAV-G 388 (434)
Q Consensus 334 ~~l~~~~~---------~~~~~~~~~~q~a~~~~L~~~~~---------------~~~~~~~~~~~~~~~l~~~L~~~-g 388 (434)
+.++.... ....+.+...+.++..+|+...+ ++++++++++++++.+.+.|+++ |
T Consensus 245 ~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 324 (406)
T 3cai_A 245 NSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPL 324 (406)
T ss_dssp HTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred hhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 66543321 11234455555455555543211 57888899999999999999987 7
Q ss_pred CEeecCC---eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 389 FKVFPSS---GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 389 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.+..+. ++ ++++.+.. .+..++.++|.+ +||.+.+|.
T Consensus 325 ~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~L~~-~gi~v~~g~ 365 (406)
T 3cai_A 325 VMLIGRPEAQIP-VVSFAVHK---VPADRVVQRLAD-NGILAIANT 365 (406)
T ss_dssp EEECCCCSSBCS-EEEEEETT---BCHHHHHHHHHH-TTEECEECC
T ss_pred eEEcCCccccCC-EEEEEECC---cCHHHHHHHHHH-CCcEEecCC
Confidence 8776653 55 45665532 247788888865 699999986
No 112
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.97 E-value=7.5e-30 Score=251.34 Aligned_cols=287 Identities=14% Similarity=0.096 Sum_probs=211.3
Q ss_pred CCcHHHHHHHHHHHHcCC----CCCCCC----CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc--
Q 013883 122 DGPDFVKDAAIQAIRDGK----NQYARG----HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI-- 191 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~----~~Y~~~----~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~-- 191 (434)
++++.+.+++.+.+.+.. ..|... .+..+++++++++++ .+++ +|++|+|+++++.+++.++.
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~-~v~~~~g~t~a~~~~~~~l~~~ 83 (382)
T 4eb5_A 11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVN------GGGG-TVVFTSGATEANNLAIIGYAMR 83 (382)
T ss_dssp CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT------CTTE-EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhC------CCCC-eEEEcCchHHHHHHHHHHHHhh
Confidence 567889999988887521 113321 234566677766664 4456 89999999999999999998
Q ss_pred --CCCCeEEEcCCCchhHHHHHHH---cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHH
Q 013883 192 --NPGDEVILFAPFYDSYEATLSM---AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNV 266 (434)
Q Consensus 192 --~~gd~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~ 266 (434)
++||+|++++|+|+.+...+.. .|++++.+++++ ++.+|++.+++++++++++|++++|+||||.+++ +++
T Consensus 84 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~ 159 (382)
T 4eb5_A 84 NARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK-YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEE 159 (382)
T ss_dssp HGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT-TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHH
T ss_pred ccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC-CCccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HHH
Confidence 8999999999999988776654 699999999875 6779999999999988999999999999999997 567
Q ss_pred HHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhh-HHHHH----HHhh
Q 013883 267 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL-TWGVR----QAHS 341 (434)
Q Consensus 267 i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~-~~~l~----~~~~ 341 (434)
|+++|++||++ |+||+|... .....+.. .+.++++.|+||.+|.+| +||++++++. +.... ....
T Consensus 160 i~~l~~~~~~~-i~D~a~~~g---~~~~~~~~----~~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~ 229 (382)
T 4eb5_A 160 ISEVLAGKAAL-HIDATASVG---QIEVDVEK----IGADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENG 229 (382)
T ss_dssp HHHHHTTSSEE-EEECTTTBT---TBCCCHHH----HTCSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGG
T ss_pred HHHHHHHCCCE-EEEcchhcC---CcccCccc----cCCCEEEeehHHhcCCCc--eEEEEEccccccCceecCCCcccc
Confidence 99999999999 999999831 11111111 134688999999988666 7999988763 11110 0011
Q ss_pred ccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCe---eEEEeeecCCCCCCCHHHHHH
Q 013883 342 FLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSG---TYFVVVDHTPFGHETDIAFCE 417 (434)
Q Consensus 342 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 417 (434)
....+.+...+.++..+|+...+++++++++++++++.+.+.|+++ |+.+..+.+ +.++++.+. +. +..++++
T Consensus 230 ~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~ 306 (382)
T 4eb5_A 230 LRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS--YI-EGESIVL 306 (382)
T ss_dssp TSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET--TS-CHHHHHH
T ss_pred ccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC--Cc-CHHHHHH
Confidence 2234455566666666776544467888999999999999999987 788776542 224455553 22 5778888
Q ss_pred HHHHhcCeEEECCCCC
Q 013883 418 YLIKEVGVVAIPTSVF 433 (434)
Q Consensus 418 ~Ll~~~GV~v~pG~~F 433 (434)
+|.+ +||.+.||..|
T Consensus 307 ~l~~-~gi~v~~g~~~ 321 (382)
T 4eb5_A 307 SLDM-AGIQASTGSAC 321 (382)
T ss_dssp HHHH-HTCBCBCCCGG
T ss_pred HHHH-CCEEEeccccc
Confidence 8864 69999999754
No 113
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.97 E-value=7e-31 Score=263.06 Aligned_cols=306 Identities=13% Similarity=0.128 Sum_probs=216.5
Q ss_pred CeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCC---CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 110 GAINLGQGFP--NFD-GPDFVKDAAIQAIRDGK---NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 110 ~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
..+||..+.+ .+. +++.+.+++.+++.+.. ..|.+..+..+|++++++++. | . .++ +|++++|+++++
T Consensus 42 ~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~-~v~~~~g~~~a~ 115 (426)
T 1sff_A 42 EYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAK-KTLLVTTGSEAV 115 (426)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCE-EEEEESSHHHHH
T ss_pred EEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-ccc-EEEEeCchHHHH
Confidence 5688877642 232 57888999988876532 145666678899999999874 2 1 235 899999999999
Q ss_pred HHHHH---HccCCCCeEEEcCCCchhHH-HHHHHcCCE-------------EEEEEcCC----CCCCCCHHHHHhhcc--
Q 013883 184 AATIL---GLINPGDEVILFAPFYDSYE-ATLSMAGAK-------------IKCITLRP----PDFAIPIEELKSTIS-- 240 (434)
Q Consensus 184 ~~~~~---~l~~~gd~Vlv~~p~y~~~~-~~~~~~G~~-------------~~~v~~~~----~~~~~d~~~l~~~i~-- 240 (434)
..++. .+.++| +|++.+|+|+++. ..+...|.+ ++.++++. .++.+|++.++++++
T Consensus 116 ~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~ 194 (426)
T 1sff_A 116 ENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKND 194 (426)
T ss_dssp HHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhc
Confidence 99988 677776 8999999998754 456666653 66777653 123468999999886
Q ss_pred ---cCCcEEEec-CCCCCcc-cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChh
Q 013883 241 ---KNTRAILMN-TPHNPTG-KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKT 315 (434)
Q Consensus 241 ---~~~~~i~~~-~p~NPTG-~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 315 (434)
+++++|+++ +++| || .+++.+++++|+++|++||++||+||+|.+|.+.+....+... +..+.+.||||.
T Consensus 195 ~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~----~~~~di~s~sK~ 269 (426)
T 1sff_A 195 AAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQM----GVAPDLTTFAKS 269 (426)
T ss_dssp CCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGT----TSCCSEEEECGG
T ss_pred cCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhc----CCCCCEEEEccc
Confidence 356677663 5678 99 7889999999999999999999999999987765543222221 112234599999
Q ss_pred hccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----C-CE
Q 013883 316 FSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----G-FK 390 (434)
Q Consensus 316 ~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g-~~ 390 (434)
+|. |+|+||+++++++++.+.......+++.+.+.+.++.++|+..++ ++..++++++++.+++.|+++ . +.
T Consensus 270 ~~~-GlriG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 346 (426)
T 1sff_A 270 IAG-GFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ--ENLLQKANDLGQKLKDGLLAIAEKHPEIG 346 (426)
T ss_dssp GGT-SSCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred ccC-CCceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 995 999999999998877665433445677888999998887764221 134455666666666666553 2 23
Q ss_pred eecCCeeEEEeeecCCC------CCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 391 VFPSSGTYFVVVDHTPF------GHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 391 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
..++. ++|+|+++.+. ...+..+++++|+++ ||.+.||..
T Consensus 347 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~~~ 392 (426)
T 1sff_A 347 DVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARARDK-GLILLSCGP 392 (426)
T ss_dssp EEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHT-TEECEEEST
T ss_pred EEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHHHC-CcEEecCCC
Confidence 33445 55778877421 011356788888765 999999874
No 114
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.97 E-value=6.3e-30 Score=258.66 Aligned_cols=296 Identities=18% Similarity=0.126 Sum_probs=207.5
Q ss_pred eeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc
Q 013883 111 AINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL 190 (434)
Q Consensus 111 ~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l 190 (434)
.+||..+....+.++.+.++ +..+...|.+..+..+||++++++++ .+ ++++++|+++++..++.++
T Consensus 44 ylD~~~~~~~~~~~~~~~~a----~~~~~~~y~~~~~~~~l~~~la~~~~--------~~-~~~~~~~gt~a~~~al~~l 110 (456)
T 2ez2_A 44 YIDLLTDSGTNAMSDKQWAG----MMMGDEAYAGSENFYHLERTVQELFG--------FK-HIVPTHQGRGAENLLSQLA 110 (456)
T ss_dssp SEECSCSSSCCCCCHHHHHH----HTTCCCCSSSCHHHHHHHHHHHHHHC--------CS-EEEEESSHHHHHHHHHHHH
T ss_pred eeeeccccCCccCCHHHHHH----hhcchhhcccChhHHHHHHHHHHHhC--------CC-cEEEeCCcHHHHHHHHHHh
Confidence 45555443222334444443 33445568877788999999999986 34 7999999999999999999
Q ss_pred cCCCCeEEEcCCCc-hhHHHHHHHcCCEEEEEEcCCC---------CCCCCHHHHHhhcccCC----cEEEecCCCC-Cc
Q 013883 191 INPGDEVILFAPFY-DSYEATLSMAGAKIKCITLRPP---------DFAIPIEELKSTISKNT----RAILMNTPHN-PT 255 (434)
Q Consensus 191 ~~~gd~Vlv~~p~y-~~~~~~~~~~G~~~~~v~~~~~---------~~~~d~~~l~~~i~~~~----~~i~~~~p~N-PT 255 (434)
+++|| +++.|+| ..+...+...|++++.++++++ ++.+|++.|++++++++ ++|++++|+| ||
T Consensus 111 ~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~pt 188 (456)
T 2ez2_A 111 IKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAG 188 (456)
T ss_dssp CCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTT
T ss_pred CCCCC--EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCC
Confidence 99999 7889999 7788899999999999988732 36889999999998766 8899999998 99
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCc----------cccCCCCcc-cc-CCCCCCCceEEEccCChhhcccccee
Q 013883 256 GKMFTREELNVIASLCIENDVLVFSDEVYDK----------LAFEMDHIS-IA-SLPGMYERTVTMNSLGKTFSLTGWKI 323 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~Deay~~----------~~~~~~~~~-~~-~~~~~~~~~i~i~S~SK~~g~~G~R~ 323 (434)
|.+++.+++++|+++|++||+++|+||+|.. +.+.+.... +. .+.. ..+++++ |++|..+ +| |+
T Consensus 189 G~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~-~~d~~~~-S~kk~~~-~~-~g 264 (456)
T 2ez2_A 189 GQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFS-YADGCTM-SGKKDCL-VN-IG 264 (456)
T ss_dssp SBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHT-TCSEEEE-ETTTTTC-CS-SC
T ss_pred CccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcc-cCCEEEE-eCcccCC-CC-ce
Confidence 9999999999999999999999999999986 334433210 00 0111 1234444 7888765 67 89
Q ss_pred eeEEe-ChhhHHHHHHHhhcc-----ccCCchHHHHH-HHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCe
Q 013883 324 GWAIA-PPHLTWGVRQAHSFL-----TFATSTPMQWA-ATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSG 396 (434)
Q Consensus 324 G~~~~-~~~~~~~l~~~~~~~-----~~~~~~~~q~a-~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 396 (434)
||+++ ++++++.++..+... ..+.+.....+ +...++..+ ++..++.+++.+.+.+.|++.|+++..+.+
T Consensus 265 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~---~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~ 341 (456)
T 2ez2_A 265 GFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQVRYLGDKLKAAGVPIVEPVG 341 (456)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHTTCCBCSSCC
T ss_pred eEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHhcCCCccccCCC
Confidence 99999 688888777654321 11222222222 333332211 234444555667788888877888877888
Q ss_pred eEEEeeecCC--CCCCCHHHH-----HHHHHHhcCeEEEC
Q 013883 397 TYFVVVDHTP--FGHETDIAF-----CEYLIKEVGVVAIP 429 (434)
Q Consensus 397 ~~~~~~~~~~--~~~~~~~~~-----~~~Ll~~~GV~v~p 429 (434)
++++|+++.. .+. +..++ +++|++++||.+.|
T Consensus 342 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~~L~~~~gv~~~~ 380 (456)
T 2ez2_A 342 GHAVFLDARRFCEHL-TQDEFPAQSLAASIYVETGVRSME 380 (456)
T ss_dssp SSEEEEEHHHHTTTS-CGGGCHHHHHHHHHHHHHSEECEE
T ss_pred ceEEEEEhHHhcCCC-ChhhccHHHHHHHHHHhcCeeeec
Confidence 8888887631 111 23344 77776677999776
No 115
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.97 E-value=7e-30 Score=251.60 Aligned_cols=287 Identities=14% Similarity=0.124 Sum_probs=211.2
Q ss_pred CCCcHHHHHHHHHHHHcCCCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEE
Q 013883 121 FDGPDFVKDAAIQAIRDGKNQYAR--GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVI 198 (434)
Q Consensus 121 ~~~~~~v~~~~~~~~~~~~~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vl 198 (434)
.+.++.+.+++.+.+. ..+.+ .....++++.+++++ |.+.+++ +|++++|+++++. ++..++++||+|+
T Consensus 11 ~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~~~~~la~~~----~~~~~~~-~v~~~~g~t~al~-~~~~~~~~gd~vi 81 (384)
T 3zrp_A 11 TTIKEDVLVAGLENNV---GFTSKEFVEALAYSLKGLRYVM----GASKNYQ-PLIIPGGGTSAME-SVTSLLKPNDKIL 81 (384)
T ss_dssp SCCCHHHHHHTTCCSC---CTTSHHHHHHHHHHHHHHHHHH----TCCTTSE-EEEEESCHHHHHH-HGGGGCCTTCEEE
T ss_pred CCCCHHHHHHhhcccc---ccccHHHHHHHHHHHHHHHHHh----CCCCCCc-EEEEcCCcHHHHH-HHHhhcCCCCEEE
Confidence 3456666665544332 11211 112334555555554 4433225 8999999999999 9999999999999
Q ss_pred EcCCCchh--HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcC
Q 013883 199 LFAPFYDS--YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIEND 275 (434)
Q Consensus 199 v~~p~y~~--~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~ 275 (434)
+++|+|++ +...+...|++++.+++++ ++.+|++.+++++++ ++++|++++|+||||.+++ +++|.++|++||
T Consensus 82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 157 (384)
T 3zrp_A 82 VVSNGVFGDRWEQIFKRYPVNVKVLRPSP-GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKYV 157 (384)
T ss_dssp EECSSHHHHHHHHHHTTSSCEEEEECCST-TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGGE
T ss_pred EecCCcchHHHHHHHHHcCCcEEEecCCC-CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhcC
Confidence 99999976 5566778999999999886 678999999999988 8999999999999999997 667999999999
Q ss_pred cEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHH-------------HHHh--
Q 013883 276 VLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV-------------RQAH-- 340 (434)
Q Consensus 276 ~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l-------------~~~~-- 340 (434)
+++|+|++|..... ...+. ..+.++++.|++|.++ .+.++||+++++++++.+ ....
T Consensus 158 ~~li~D~a~~~~~~---~~~~~----~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (384)
T 3zrp_A 158 ELIVVDGVSSVGAE---EVKAE----EWNVDVYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPV 229 (384)
T ss_dssp EEEEEECTTTTTTS---CCCTT----TTTCSEEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHH
T ss_pred CEEEEECcccccCc---ccccc----ccCCCEEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHH
Confidence 99999999875322 11111 1245689999999885 345599999999988776 2222
Q ss_pred -------hcccc-CCchHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHhhhCCCEeecCC----eeEEEeeecCCC
Q 013883 341 -------SFLTF-ATSTPMQWAATAALRAPET-YYEELKRDYSAKKAILVEGLNAVGFKVFPSS----GTYFVVVDHTPF 407 (434)
Q Consensus 341 -------~~~~~-~~~~~~q~a~~~~L~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~~~~~~~ 407 (434)
....+ +.+...+.++..+|+...+ .+++++++++++++.+.+.|++.|+++..+. +++++++.+..
T Consensus 230 ~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~- 308 (384)
T 3zrp_A 230 MRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKV- 308 (384)
T ss_dssp HHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSS-
T ss_pred HHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCC-
Confidence 11122 4555666666666664333 3778899999999999999999898887766 46666777643
Q ss_pred CCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 408 GHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 408 ~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
.+..+++++|.++ ||.+.||..
T Consensus 309 --~~~~~~~~~l~~~-gi~v~~g~~ 330 (384)
T 3zrp_A 309 --ADPQKVLAGTVNE-GVEFAPGVH 330 (384)
T ss_dssp --SCHHHHHHHHHTT-TCCCEECCC
T ss_pred --CCHHHHHHHHHHC-CEEEecCCC
Confidence 3577899988766 999999973
No 116
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.97 E-value=2e-29 Score=252.18 Aligned_cols=297 Identities=15% Similarity=0.124 Sum_probs=217.6
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCC------------CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEc
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARG------------HGVPEFNSAIASRFKKDSGLEVDPEKEVTVT 176 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~------------~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t 176 (434)
.+.|.|..+.+. +.++.+.+++.+++... ..|..+ .+..++++.++++++ .+++ +|+++
T Consensus 21 ~~~iyld~~~~~-~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~~-~v~~~ 91 (423)
T 3lvm_A 21 KLPIYLDYSATT-PVDPRVAEKMMQFMTMD-GTFGNPASRSHRFGWQAEEAVDIARNQIADLVG------ADPR-EIVFT 91 (423)
T ss_dssp CSSEECBTTTCC-CCCHHHHHHHTTSSSTT-SCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHT------CCGG-GEEEE
T ss_pred CCCEeecCCCcC-CCCHHHHHHHHHHHhhc-ccccCCCccccchhHHHHHHHHHHHHHHHHHcC------CCCC-eEEEe
Confidence 367888777665 56788888887766510 112111 122456666666554 4566 89999
Q ss_pred CChHHHHHHHHHHccC----CCCeEEEcCCCchhHHHHHHH---cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEec
Q 013883 177 SGCTEAIAATILGLIN----PGDEVILFAPFYDSYEATLSM---AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMN 249 (434)
Q Consensus 177 ~G~~~ai~~~~~~l~~----~gd~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~ 249 (434)
+|+++++.+++.++.+ +||+|+++.|+|+++...+.. .|++++.++.++ ++.+|++.+++++++++++|+++
T Consensus 92 ~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~v~~~ 170 (423)
T 3lvm_A 92 SGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR-NGIIDLKELEAAMRDDTILVSIM 170 (423)
T ss_dssp SSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT-TSCCCHHHHHHHCCTTEEEEECC
T ss_pred CChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC-CCccCHHHHHHhcCCCcEEEEEe
Confidence 9999999999998874 899999999999998877744 599999999886 78889999999999999999999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC
Q 013883 250 TPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 250 ~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
+|+||||.+++ +++|+++|++||++||+||+|..... ..... ..+..+++.|+||.+|.+| +||++++
T Consensus 171 ~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~---~~~~~----~~~~di~~~s~sK~~g~~g--~G~~~~~ 238 (423)
T 3lvm_A 171 HVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL---PIDLS----QLKVDLMSFSGHKIYGPKG--IGALYVR 238 (423)
T ss_dssp SBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS---CCCTT----TSCCSEEEEESTTTTSCSS--CEEEEEC
T ss_pred CCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC---CcChh----hcCCCEEEechHHhcCCCC--eEEEEEe
Confidence 99999999997 66699999999999999999875321 11111 1245688999999888666 9999999
Q ss_pred hhhHHHHHHHhh-------ccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCe---eE
Q 013883 330 PHLTWGVRQAHS-------FLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSG---TY 398 (434)
Q Consensus 330 ~~~~~~l~~~~~-------~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~ 398 (434)
++....+..... ....+.+...+.++..+++...+++++++++++++++.+.+.|+++ |+.+..+.+ +.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 318 (423)
T 3lvm_A 239 RKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPN 318 (423)
T ss_dssp BTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTT
T ss_pred ccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCC
Confidence 776554433221 2234556666777767776545557888999999999999999988 888876653 12
Q ss_pred EEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 399 FVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
++++.+. + .+..++.+.|.+ |.+.+|..|
T Consensus 319 ~~~~~~~--~-~~~~~l~~~l~~---i~v~~g~~~ 347 (423)
T 3lvm_A 319 ILNVSFN--Y-VEGESLIMALKD---LAVSSGSAC 347 (423)
T ss_dssp EEEEEET--T-SCHHHHHHHTTT---EECBCCCC-
T ss_pred eEEEEeC--C-CCHHHHHHHHhh---heeccCccc
Confidence 3333332 2 246777777643 999998765
No 117
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.97 E-value=1.5e-29 Score=251.49 Aligned_cols=286 Identities=15% Similarity=0.181 Sum_probs=206.2
Q ss_pred eEeCCCCCCCCCcHHHHHHHHHHHH---c--CCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 112 INLGQGFPNFDGPDFVKDAAIQAIR---D--GKNQYA--RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 112 i~l~~g~p~~~~~~~v~~~~~~~~~---~--~~~~Y~--~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
.+++.++|++..++.+.+++.+++. + ..+.|. +..+..++++.++++++ . + + .+++++ +++++.
T Consensus 23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g----~--~-~-~i~~~s-G~~a~~ 93 (398)
T 2rfv_A 23 STGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLER----G--E-A-GLATAS-GISAIT 93 (398)
T ss_dssp TTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHT----C--S-E-EEEESS-HHHHHH
T ss_pred CCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhC----C--C-c-EEEECC-HHHHHH
Confidence 3578899999988877777666655 2 223343 22234556666666554 2 1 3 455555 569999
Q ss_pred HHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCC
Q 013883 185 ATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFT 260 (434)
Q Consensus 185 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~ 260 (434)
.++.+++++||+|+++.|.|+++...+ ...|.+++.++.+ |++.+++++++++++|++++|+||||.+++
T Consensus 94 ~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~ 167 (398)
T 2rfv_A 94 TTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA------KPEEIRAAMRPETKVVYIETPANPTLSLVD 167 (398)
T ss_dssp HHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC------CHHHHHHhcCCCCeEEEEECCCCCCCcccC
Confidence 999999999999999999999988776 7889999998875 799999999989999999999999999996
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccccee-eeEEeChhhHH-HHHH
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKI-GWAIAPPHLTW-GVRQ 338 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~-G~~~~~~~~~~-~l~~ 338 (434)
+++|+++|++||+++|+||+|..+.+.. .+ . .+.++++.|+||.++.+|+|+ ||+++++++++ .++.
T Consensus 168 ---l~~i~~l~~~~~~~li~De~~~~~~~~~---~~-~----~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~ 236 (398)
T 2rfv_A 168 ---IETVAGIAHQQGALLVVDNTFMSPYCQQ---PL-Q----LGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFV 236 (398)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTTCTTTCC---GG-G----GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT
T ss_pred ---HHHHHHHHHHcCCEEEEECCCcccccCC---ch-h----hCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHH
Confidence 7889999999999999999999765531 11 1 246789999999998899998 99999998887 5665
Q ss_pred Hhhcc-ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC---------------CCEeec----CCeeE
Q 013883 339 AHSFL-TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV---------------GFKVFP----SSGTY 398 (434)
Q Consensus 339 ~~~~~-~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------------g~~~~~----~~~~~ 398 (434)
..... ..+.+.+.+.++..+|+...+++++ +.++.+.+.+.|++. ++.+.. ..+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~ 312 (398)
T 2rfv_A 237 GLKDITGGCMSPFNAWLTLRGVKTLGIRMER----HCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGI 312 (398)
T ss_dssp HHHHTTCCCCCHHHHHHHHHHHTTHHHHHHH----HHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSE
T ss_pred HHHhCCCCCCCHHHHHHHHhhhhhHHHHHHH----HHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceE
Confidence 55444 5677888899999999764333333 444555555555543 222222 24666
Q ss_pred EEeeecCCCCCCCHHHHHHHHHHhc---CeEEECCCCC
Q 013883 399 FVVVDHTPFGHETDIAFCEYLIKEV---GVVAIPTSVF 433 (434)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~Ll~~~---GV~v~pG~~F 433 (434)
+.| ++.. ..+.+.+++++. ||.+.+|+.|
T Consensus 313 ~~~-~~~~-----~~~~~~~l~~~~~~~~i~~~~G~~~ 344 (398)
T 2rfv_A 313 ISF-EIAG-----GLEAGRRMINSVELCLLAVSLGDTE 344 (398)
T ss_dssp EEE-EETT-----HHHHHHHHHTTCSSSEECSCCSSSS
T ss_pred EEE-EEcC-----CHHHHHHHHHhCCcceeccCCCCcc
Confidence 655 6632 223344455544 8888888654
No 118
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.97 E-value=6.9e-29 Score=248.77 Aligned_cols=289 Identities=17% Similarity=0.125 Sum_probs=220.1
Q ss_pred EeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC-CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc
Q 013883 113 NLGQGFPNFDGPDFVKDAAIQAIRDGKNQYAR-GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI 191 (434)
Q Consensus 113 ~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~ 191 (434)
+|+.|.|++++|+.+.+++.+++..+ .|++ ..+..+||++++++++ .+ ++++++|+++++.+++.++.
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~~--~y~~~~~~~~~l~~~la~~~~--------~~-~v~~~~ggt~al~~~l~~l~ 88 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDSQ--WLSNGGPLVREFEERVAGLAG--------VR-HAVATCNATAGLQLLAHAAG 88 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHHT--CCSSSCHHHHHHHHHHHHHHT--------SS-EEEEESCHHHHHHHHHHHHT
T ss_pred cccccCCCCCChHHHHHHHHHHHhcC--CcccCCHHHHHHHHHHHHHhC--------CC-eEEEeCCHHHHHHHHHHHcC
Confidence 68899999999999999998888764 5777 6788999999999986 24 79999999999999999885
Q ss_pred CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHH
Q 013883 192 NPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLC 271 (434)
Q Consensus 192 ~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la 271 (434)
+||+|++++|+|+.+...+...|++++.++++++++.+|++.+++++++++++|+++ ||||... ++++|+++|
T Consensus 89 -~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~tG~~~---~l~~i~~la 161 (424)
T 2po3_A 89 -LTGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGV---HLWGRPC---AADQLRKVA 161 (424)
T ss_dssp -CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEE---CGGGCCC---CHHHHHHHH
T ss_pred -CCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEE---CCCCCcC---CHHHHHHHH
Confidence 789999999999999999999999999999986678899999999998888998875 4899875 677899999
Q ss_pred HHcCcEEEEcCcCC-ccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhhccccC---
Q 013883 272 IENDVLVFSDEVYD-KLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLTFA--- 346 (434)
Q Consensus 272 ~~~~~~iI~Deay~-~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~~~--- 346 (434)
+++|+++|+||+|. ++.+++. .+..+ .+ +++.||||..+++|+|+||++++ +++++.++.........
T Consensus 162 ~~~~~~li~Dea~~~g~~~~~~--~~~~~---~d--i~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~ 234 (424)
T 2po3_A 162 DEHGLRLYFDAAHALGCAVDGR--PAGSL---GD--AEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGG 234 (424)
T ss_dssp HHTTCEEEEECTTCTTCEETTE--ETTSS---SS--EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTC
T ss_pred HHcCCEEEEECccccCCeECCe--ecccc---cC--EEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCcccccc
Confidence 99999999999999 5666542 22222 22 88999996666677999999999 88888887765432111
Q ss_pred -----Cc-hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeec-CCee---EE-EeeecCCC--CCCCH
Q 013883 347 -----TS-TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFP-SSGT---YF-VVVDHTPF--GHETD 412 (434)
Q Consensus 347 -----~~-~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~---~~-~~~~~~~~--~~~~~ 412 (434)
.+ .+.+.+++.++.. .+++++..++.+++++.+.+.|+++ |+.+.. ++++ ++ +++.+... +. +.
T Consensus 235 ~~~~g~~~~~~~~~aa~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~ 312 (424)
T 2po3_A 235 SPAGGTNAKMSEAAAAMGLTS-LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGI-HR 312 (424)
T ss_dssp CTTCCCBCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSS-CH
T ss_pred ccccCcCCCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchh-hH
Confidence 00 1122233333332 2356667777788888899999887 888765 4433 23 33554310 22 46
Q ss_pred HHHHHHHHHhcCeEEEC
Q 013883 413 IAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 413 ~~~~~~Ll~~~GV~v~p 429 (434)
.++.+.|. ++||.+.+
T Consensus 313 ~~l~~~L~-~~gI~v~~ 328 (424)
T 2po3_A 313 DLVMEVLK-AEGVHTRA 328 (424)
T ss_dssp HHHHHHHH-HTTEECBC
T ss_pred HHHHHHHH-HCCCceec
Confidence 67877765 56999987
No 119
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.97 E-value=3.3e-30 Score=255.94 Aligned_cols=296 Identities=15% Similarity=0.134 Sum_probs=216.4
Q ss_pred CeeEeCCC---CCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQG---FPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g---~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..+||+.+ .+--.+++.+.+++.+++..... +... ...++++++++.+.+.+| .+ ++++++|+++++..+
T Consensus 41 ~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~-~~~~-~~~~~~~~l~~~la~~~g----~~-~v~~~~gg~~a~~~a 113 (397)
T 2ord_A 41 AYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIH-CSNL-FWNRPQMELAELLSKNTF----GG-KVFFANTGTEANEAA 113 (397)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSC-CCTT-SEEHHHHHHHHHHHHTTT----SC-EEEEESSHHHHHHHH
T ss_pred EEEECCccccccccCCCCHHHHHHHHHHHHhccc-Cccc-cCCHHHHHHHHHHHHhcC----CC-eEEEeCCHHHHHHHH
Confidence 56888776 22112578899999988876322 2111 123556666666666555 45 899999999999999
Q ss_pred HHHccC------C-CCeEEEcCCCchhH-HHHHHHcCCE------------EEEEEcCCCCCCCCHHHHHhhcccCCcEE
Q 013883 187 ILGLIN------P-GDEVILFAPFYDSY-EATLSMAGAK------------IKCITLRPPDFAIPIEELKSTISKNTRAI 246 (434)
Q Consensus 187 ~~~l~~------~-gd~Vlv~~p~y~~~-~~~~~~~G~~------------~~~v~~~~~~~~~d~~~l~~~i~~~~~~i 246 (434)
+..+.. + +++|++.+|+|++. ...+...|.+ ++.++.+ |++.+++++++++++|
T Consensus 114 l~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~------d~~~l~~~l~~~~~~v 187 (397)
T 2ord_A 114 IKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN------NVEDLRRKMSEDVCAV 187 (397)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT------CHHHHHHHCCTTEEEE
T ss_pred HHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCC------CHHHHHHHhhcCeEEE
Confidence 988763 5 47899999999764 4467777876 6666653 8999999998889999
Q ss_pred EecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeee
Q 013883 247 LMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGW 325 (434)
Q Consensus 247 ~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~ 325 (434)
++++|+||||. +++.+++++|+++|++||+++|+||+|.++.+.+....+..+....+ +.||||.++ +|+|+||
T Consensus 188 ~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d----~~s~sK~~~-~G~r~G~ 262 (397)
T 2ord_A 188 FLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPD----VLTTAKGLG-GGVPIGA 262 (397)
T ss_dssp EECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCS----EEEECGGGG-TTSCCEE
T ss_pred EEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCC----eeeeccccC-CCcCeEE
Confidence 99999999999 99999999999999999999999999998766554333322321122 228899999 9999999
Q ss_pred EEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--CCEe---ecCCeeEEE
Q 013883 326 AIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV--GFKV---FPSSGTYFV 400 (434)
Q Consensus 326 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~~~~~~ 400 (434)
++++++++ .++......+++.+.+.+.++.++|+..++ ++++++++++++.+.+.|+++ ++.. .++.++ |+
T Consensus 263 ~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~-~~ 338 (397)
T 2ord_A 263 VIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK--EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGL-MI 338 (397)
T ss_dssp EEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETT-EE
T ss_pred EEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeE-EE
Confidence 99998876 554333345677888999998888875322 456778888888888888765 3332 334444 55
Q ss_pred eeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 401 VVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
++++.. . .+..+++++|++ +||.+.||
T Consensus 339 ~~~~~~-~-~~~~~l~~~l~~-~gi~v~~~ 365 (397)
T 2ord_A 339 GIQFRE-E-VSNREVATKCFE-NKLLVVPA 365 (397)
T ss_dssp EEEECT-T-SCHHHHHHHHHH-TTEECEEE
T ss_pred EEEECC-h-HHHHHHHHHHHH-CCCEEccC
Confidence 667643 1 247789888876 59999987
No 120
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.97 E-value=2.7e-29 Score=249.77 Aligned_cols=304 Identities=18% Similarity=0.191 Sum_probs=219.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc-CCCCCCCCC---CcHH--HHHHHH-HHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGH---GVPE--FNSAIA-SRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~-~~~~Y~~~~---G~~~--lr~~ia-~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.|+|..|.+.+ ++.+.+++.+++.+ ....|+... |.+. ++++++ +.+.+.+|. +++ +|++++| +++
T Consensus 24 ~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~--~~~-~i~~~sG-t~a 97 (407)
T 2dkj_A 24 EGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA--AWA-NVQPHSG-SQA 97 (407)
T ss_dssp TSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEE-ECCCSSH-HHH
T ss_pred cceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC--Ccc-eEEecch-HHH
Confidence 679999997766 78899888888764 334565432 5443 444322 355555554 344 5666776 569
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhH---HHHHHHcCC--EEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcc
Q 013883 183 IAATILGLINPGDEVILFAPFYDSY---EATLSMAGA--KIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTG 256 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~---~~~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG 256 (434)
+..++.+++++||+|++++|+|+.+ ...+...|. ..+.++.+++++.+|++.+++++++ ++++|++++|+||
T Consensus 98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~-- 175 (407)
T 2dkj_A 98 NMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP-- 175 (407)
T ss_dssp HHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--
T ss_pred HHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--
Confidence 9999999999999999999999887 344455565 4444443444688999999999985 8999999999998
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCCc-cccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYDK-LAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTW 334 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~~-~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~ 334 (434)
...+ +++|.++|++||+++|+||+|.. +.+.+..... + ...++++.|+||.+ +|+|+||++++ +++++
T Consensus 176 ~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~--~---~~~di~~~s~sK~l--~g~~~G~~~~~~~~~~~ 245 (407)
T 2dkj_A 176 RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNP--L---PYAHVVTSTTHKTL--RGPRGGLILSNDPELGK 245 (407)
T ss_dssp SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCC--T---TTCSEEEEESSGGG--CCCSCEEEEESCHHHHH
T ss_pred CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCc--c---ccccEEEEeccccC--CCCCceEEEECCHHHHH
Confidence 4443 78899999999999999999997 5444322211 1 12568899999955 58899999999 89998
Q ss_pred HHHHHhhccccCCchHH-HHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeec-CCeeEEEeeecCCCCCCC
Q 013883 335 GVRQAHSFLTFATSTPM-QWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFP-SSGTYFVVVDHTPFGHET 411 (434)
Q Consensus 335 ~l~~~~~~~~~~~~~~~-q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~ 411 (434)
.++........+.+.+. ..++..+|+.. .+++++++++++++++.+.+.|++.|+++.. +..++++|+.+...+. +
T Consensus 246 ~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~ 324 (407)
T 2dkj_A 246 RIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGL-T 324 (407)
T ss_dssp HHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTC-C
T ss_pred HHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCceeecCCCCceEEEEECcccCC-C
Confidence 88876644444444443 33556666652 3577889999999999999999999998874 3456677887753222 4
Q ss_pred HHHHHHHHHHhcCeEEECCCCC
Q 013883 412 DIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
..++.+.| .++||.+.||..|
T Consensus 325 ~~~~~~~l-~~~gi~v~~~~~~ 345 (407)
T 2dkj_A 325 GKEAEERL-DAVGITVNKNAIP 345 (407)
T ss_dssp HHHHHHHH-HHTTEECEECCCT
T ss_pred HHHHHHHH-HHcCceecCCcCc
Confidence 66788777 4569999998753
No 121
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=6.7e-29 Score=247.51 Aligned_cols=266 Identities=14% Similarity=0.162 Sum_probs=206.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEE-EcCChHHHHHHHHHHccCCCCeEEEcCCCchh--HHHHHHHcCCEEEEEEcCC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVT-VTSGCTEAIAATILGLINPGDEVILFAPFYDS--YEATLSMAGAKIKCITLRP 225 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~-~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~G~~~~~v~~~~ 225 (434)
.++.+.+.+.+.+.+|. +++ +++ +++|+++++..++.+++++||+|++++|+|++ +...++..|++++.++.++
T Consensus 43 ~~~~~~l~~~la~~~g~--~~~-~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 119 (416)
T 3isl_A 43 TGIMNETMEMLRELFQT--KNR-WAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEW 119 (416)
T ss_dssp HHHHHHHHHHHHHHTTC--CCS-EEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred HHHHHHHHHHHHHHhCC--CCC-cEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCC
Confidence 34455555555555553 344 455 88999999999999999999999999999998 7778899999999999885
Q ss_pred CCCCCCHHHHHhhcc-cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCC
Q 013883 226 PDFAIPIEELKSTIS-KNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYE 304 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~-~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~ 304 (434)
++.+|++.++++++ +++++|++++||||||.+.+ +++|.++|++||+++|+|++|..... ...+. ..+
T Consensus 120 -~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~---~~~~~----~~~ 188 (416)
T 3isl_A 120 -GTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATIGGC---EVKVD----EWK 188 (416)
T ss_dssp -TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTTTTS---CCCTT----TTT
T ss_pred -CCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCccccCC---Ccchh----hcC
Confidence 56889999999998 58999999999999999987 67799999999999999999874321 11111 123
Q ss_pred ceEEEccCChhhccccceeeeEEeChhhHHHHHHHh--------------------------------------hccccC
Q 013883 305 RTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAH--------------------------------------SFLTFA 346 (434)
Q Consensus 305 ~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~--------------------------------------~~~~~~ 346 (434)
..+++.|++|.++ .+.++|++++++++++.+...+ .....+
T Consensus 189 ~d~~~~s~~K~l~-g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (416)
T 3isl_A 189 IDAAIGGTQKCLS-VPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHT 267 (416)
T ss_dssp CSEEECCSSSTTC-CCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSC
T ss_pred CCEEEecCccccC-CCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCC
Confidence 5688999999754 3456999999999988776321 112335
Q ss_pred CchHHHHHHHHHHhCChHH-HHHHHHHHHHHHHHHHHHhhhCCCEeecCCe---eEEEeeecCCCCCCCHHHHHHHHHHh
Q 013883 347 TSTPMQWAATAALRAPETY-YEELKRDYSAKKAILVEGLNAVGFKVFPSSG---TYFVVVDHTPFGHETDIAFCEYLIKE 422 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ll~~ 422 (434)
.+...+.++..+|+...++ +++++++++++++.+.+.|++.|+++..+.+ +.++++.++. +. +..++.++|+++
T Consensus 268 ~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~~-~~~~l~~~L~~~ 345 (416)
T 3isl_A 268 EATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVTCVEIPG-GI-DGESVRDMLLAQ 345 (416)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEEEEECCT-TC-CHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEEEEeCCC-CC-CHHHHHHHHHHh
Confidence 5667777777777765555 7889999999999999999999988877654 4456666532 22 578899999887
Q ss_pred cCeEEECCC
Q 013883 423 VGVVAIPTS 431 (434)
Q Consensus 423 ~GV~v~pG~ 431 (434)
+||.+.||.
T Consensus 346 ~gi~v~~g~ 354 (416)
T 3isl_A 346 FGIEIASSF 354 (416)
T ss_dssp HCEECBCCC
T ss_pred CCEEEecCC
Confidence 799999885
No 122
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.96 E-value=2.3e-29 Score=244.87 Aligned_cols=288 Identities=16% Similarity=0.135 Sum_probs=212.3
Q ss_pred CCCcHHHHHHHHHHHHcCCCCCCC-CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEE
Q 013883 121 FDGPDFVKDAAIQAIRDGKNQYAR-GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVIL 199 (434)
Q Consensus 121 ~~~~~~v~~~~~~~~~~~~~~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv 199 (434)
.+.++.+.+++.+.+.. +.|.. ..+..++|++++++++ .+.+++ +|++|+|+++++.+++.++++ |+|++
T Consensus 9 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g----~~~~~~-~v~~t~g~t~a~~~~~~~~~~--d~vl~ 79 (353)
T 2yrr_A 9 TPIPERVQKALLRPMRG--HLDPEVLRVNRAIQERLAALFD----PGEGAL-VAALAGSGSLGMEAGLANLDR--GPVLV 79 (353)
T ss_dssp CCCCHHHHGGGGSCCCC--TTCHHHHHHHHHHHHHHHHHHC----CCTTCE-EEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred CCCCHHHHHHHhccccc--ccCHHHHHHHHHHHHHHHHHhC----CCCCCc-eEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence 45567777776555432 22221 1234566777766664 333455 899999999999999998877 89999
Q ss_pred cCCCchhH--HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCc
Q 013883 200 FAPFYDSY--EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDV 276 (434)
Q Consensus 200 ~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~ 276 (434)
++|.|+++ ...++..|++++.++.++ ++.+|++.+++++++ ++++|++++|+||||.+++ +++|.++|++||+
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~ 155 (353)
T 2yrr_A 80 LVNGAFSQRVAEMAALHGLDPEVLDFPP-GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAGA 155 (353)
T ss_dssp EECSHHHHHHHHHHHHTTCCEEEEECCT-TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHTC
T ss_pred EcCCCchHHHHHHHHHcCCceEEEeCCC-CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcCC
Confidence 99999985 455677899999999975 677999999999988 8999999999999999997 5678999999999
Q ss_pred EEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhh-ccccceeeeEEeChhhHHHHHH-------------H--h
Q 013883 277 LVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTF-SLTGWKIGWAIAPPHLTWGVRQ-------------A--H 340 (434)
Q Consensus 277 ~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~~~~~~~~~~~l~~-------------~--~ 340 (434)
++|+||+|.... ....+..+ +..+++.|++|.+ |.+| +||+++++++++.++. . .
T Consensus 156 ~li~D~a~~~~~---~~~~~~~~----~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 226 (353)
T 2yrr_A 156 LFFLDAVTTLGM---LPFSMRAM----GVDYAFTGSQKCLSAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAEHWER 226 (353)
T ss_dssp EEEEECTTTTTT---SCCCHHHH----TCSEEECCTTSTTCCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTT
T ss_pred eEEEEcCccccc---cccccccc----CceEEEecCcccccCCCc--eEEEEECHHHHHHhccCCCccccHHHHhhhhhc
Confidence 999999996321 11122111 2357889999966 4455 7999999998866531 0 1
Q ss_pred hccccCCchHHHHHHHHHHhCChHH-HHHHHHHHHHHHHHHHHHhhhCCCEeecCC--eeEEEeeecCCCCCCCHHHHHH
Q 013883 341 SFLTFATSTPMQWAATAALRAPETY-YEELKRDYSAKKAILVEGLNAVGFKVFPSS--GTYFVVVDHTPFGHETDIAFCE 417 (434)
Q Consensus 341 ~~~~~~~~~~~q~a~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 417 (434)
.....+.+...+.++..+|+...++ +++++++++++++.+.+.|++.|+++..+. +++++++.++. +. +..++++
T Consensus 227 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~ 304 (353)
T 2yrr_A 227 GGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPE-GV-DADRLVR 304 (353)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCT-TC-CHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCC-CC-CHHHHHH
Confidence 2223456667777777777654333 778889999999999999998898887654 56666777632 22 5778988
Q ss_pred HHHHhcCeEEECCCCC
Q 013883 418 YLIKEVGVVAIPTSVF 433 (434)
Q Consensus 418 ~Ll~~~GV~v~pG~~F 433 (434)
+|.++ ||.+.||..|
T Consensus 305 ~l~~~-gi~v~~g~~~ 319 (353)
T 2yrr_A 305 ALYAE-GVAVAGGIGP 319 (353)
T ss_dssp HHHHT-TEECEECCGG
T ss_pred HHHHC-CEEEeCCccc
Confidence 88766 9999998754
No 123
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.96 E-value=4.4e-29 Score=250.58 Aligned_cols=311 Identities=15% Similarity=0.094 Sum_probs=203.8
Q ss_pred CeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQG--FPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..+||..+ ...+. .+|.+.+++.+++.+. ..|.+..+..++++++++++.+.++. +.+ +|++++|+++++..+
T Consensus 30 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~--~~~-~v~~~~gg~ea~~~a 105 (430)
T 3i4j_A 30 RYLDGSSGALVANIGHGRAEVGERMAAQAARL-PFVHGSQFSSDVLEEYAGRLARFVGL--PTF-RFWAVSGGSEATESA 105 (430)
T ss_dssp EEEETTHHHHTCTTCBCCHHHHHHHHHHHHHC-CCCCTTTCEEHHHHHHHHHHHHHTTC--TTC-EEEEESSHHHHHHHH
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhc-ccccccccCCHHHHHHHHHHHHhCCC--CCC-EEEEeCcHHHHHHHH
Confidence 57888776 22233 3788999999888764 33544456677888888888877763 456 899999999999999
Q ss_pred HHHcc--------CCCCeEEEcCCCchhHHHHHHHcCCE---------------EEEEEcCCCC---CCCCHHHHHhhcc
Q 013883 187 ILGLI--------NPGDEVILFAPFYDSYEATLSMAGAK---------------IKCITLRPPD---FAIPIEELKSTIS 240 (434)
Q Consensus 187 ~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~G~~---------------~~~v~~~~~~---~~~d~~~l~~~i~ 240 (434)
++.++ .++|.|++.+|+|+++...+...+.. +..++.++ . ...|++.|+++++
T Consensus 106 l~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~le~~l~ 184 (430)
T 3i4j_A 106 VKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPD-PARNGAEDAEGLRALLE 184 (430)
T ss_dssp HHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCC-TTSCHHHHHTHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCc-ccchhhHHHHHHHHHHH
Confidence 98886 44789999999999987665544432 22222221 1 1125688888886
Q ss_pred ----cCCcEEEecCCCC-Cccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCCh
Q 013883 241 ----KNTRAILMNTPHN-PTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGK 314 (434)
Q Consensus 241 ----~~~~~i~~~~p~N-PTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK 314 (434)
+++++|+++.++| ++|. +++.+++++|+++|++||+++|+||+|.+|.+.+.......+++...+ +.+|||
T Consensus 185 ~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~d---i~t~sK 261 (430)
T 3i4j_A 185 REGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPD---IAVLGK 261 (430)
T ss_dssp HHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCS---EEEECG
T ss_pred hcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCc---EEEEcc
Confidence 3344555544566 8887 668888999999999999999999999998776654443333111122 347999
Q ss_pred hhcccc-ceeeeEEeChhhHHHHHHH----hhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 315 TFSLTG-WKIGWAIAPPHLTWGVRQA----HSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 315 ~~g~~G-~R~G~~~~~~~~~~~l~~~----~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
.++ .| +|+||+++++++++.+... ....+++.+++++.++.++|+.. +++.++.++..+..++.+.+.+.+.
T Consensus 262 ~l~-~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (430)
T 3i4j_A 262 GLA-AGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARF 340 (430)
T ss_dssp GGT-TTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccc-CCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999 69 9999999999999988864 34467888999999999988742 3344555555555555555555444
Q ss_pred -CCEeecCCeeEEEeeecCCCC-------CCCHHHHHHHHHHhcCeEEECCC
Q 013883 388 -GFKVFPSSGTYFVVVDHTPFG-------HETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 388 -g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
++...++.|.|+ ++.+.... .....+++++|++ +||.+.|+.
T Consensus 341 ~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~ 390 (430)
T 3i4j_A 341 PQMMQVRGTGLLL-GVVLGDLATGQAFETPGIASRIGAAALK-RGLITYPGS 390 (430)
T ss_dssp TTEEEEEEETTEE-EEEEC------------CHHHHHHHHHH-TTEECC---
T ss_pred CCeEEEEEEEEEE-EEEeccccccCCCccHHHHHHHHHHHHh-CCCEEEecc
Confidence 456666666654 44442210 1123578888875 599999983
No 124
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.96 E-value=1.3e-28 Score=245.09 Aligned_cols=289 Identities=13% Similarity=0.137 Sum_probs=215.1
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcC
Q 013883 122 DGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFA 201 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~ 201 (434)
+.++.+.+++.+.+ ...|.+ ...++.+.+.+.+.+.+|.+ .++.+++++|+++++..++.+++++||+|++++
T Consensus 23 ~~~~~v~~a~~~~~---~~~~~~--~~~~~~~~~~~~la~~~~~~--~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~ 95 (411)
T 3nnk_A 23 NADPRVLRAMSSQL---IGQYDP--AMTHYMNEVMALYRGVFRTE--NRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPV 95 (411)
T ss_dssp CCCHHHHHHHTSCC---CCTTCH--HHHHHHHHHHHHHHHHHTCC--CSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCHHHHHHhhccc---cccccH--HHHHHHHHHHHHHHHHhCCC--CCcEEEECCCcHHHHHHHHHHhcCCCCEEEEec
Confidence 34566665554322 122222 22344444555555555543 342488899999999999999999999999999
Q ss_pred CCchh--HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEE
Q 013883 202 PFYDS--YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLV 278 (434)
Q Consensus 202 p~y~~--~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~i 278 (434)
|+|++ +...++..|++++.++.++ ++.+|++.+++++++ ++++|++++|+||||.+.+ +++|+++|++||+++
T Consensus 96 ~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~l 171 (411)
T 3nnk_A 96 FGRFGHLLCEIARRCRAEVHTIEVPW-GEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEICRRYDALF 171 (411)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEE
T ss_pred CCchHHHHHHHHHHcCCeEEEEecCC-CCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHHHHcCCEE
Confidence 99987 8888999999999999864 678899999999987 8999999999999999987 667999999999999
Q ss_pred EEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHh------------------
Q 013883 279 FSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAH------------------ 340 (434)
Q Consensus 279 I~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~------------------ 340 (434)
|+||++..... ..... ..+..+++.|++|.++ .+.++||+++++++++.++...
T Consensus 172 i~Dea~~~~~~---~~~~~----~~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~ 243 (411)
T 3nnk_A 172 YTDATASLGGN---PLETD----VWGLDAVSAGMQKCLG-GPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEM 243 (411)
T ss_dssp EEECTTTBTTB---CCCTT----TTTCSEEECCSTTTTC-CCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCC
T ss_pred EEECCcccCCc---ccchh----ccCCcEEEecCccccC-CCCceEEEEECHHHHHHHhhcccccccccccccccccCCC
Confidence 99999865221 11111 1245688999999854 3456999999999988877543
Q ss_pred ------------------hccccCCchHHHHHHHHHHhCChHH-HHHHHHHHHHHHHHHHHHhhhCCCEeecCCe---eE
Q 013883 341 ------------------SFLTFATSTPMQWAATAALRAPETY-YEELKRDYSAKKAILVEGLNAVGFKVFPSSG---TY 398 (434)
Q Consensus 341 ------------------~~~~~~~~~~~q~a~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~ 398 (434)
.....+.+...+.++..+|+...++ +++++++++++++.+.+.|++.|+.+..+.+ +.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 323 (411)
T 3nnk_A 244 IYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNN 323 (411)
T ss_dssp CSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSS
T ss_pred CcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCccccccc
Confidence 1122455666777777777754444 7888999999999999999999988876553 45
Q ss_pred EEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 399 FVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
++++.++. +. +..+++++|++++||.+.||.
T Consensus 324 ~~~~~~~~-~~-~~~~l~~~l~~~~gi~v~~g~ 354 (411)
T 3nnk_A 324 VLGVVIPQ-GI-NGDQARKLMLEDFGIEIGTSF 354 (411)
T ss_dssp EEEEECCT-TC-CHHHHHHHHHHHHSEEEEECC
T ss_pred EEEEECCC-CC-CHHHHHHHHHHhcCeEEeCcc
Confidence 66666532 22 577899999887899999974
No 125
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.96 E-value=3.3e-29 Score=250.77 Aligned_cols=300 Identities=15% Similarity=0.117 Sum_probs=210.7
Q ss_pred CeeEeCCCCC--CCCC--cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 110 GAINLGQGFP--NFDG--PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 110 ~~i~l~~g~p--~~~~--~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
..+||..|.+ .+.. ++.+.+++.+++.+.. .|.+..+..+++.++++.+.+.+|.+. ++ +|++++|+++++..
T Consensus 43 ~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~-~~-~v~~~~gg~ea~~~ 119 (419)
T 2eo5_A 43 KYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA-HAAANDFYNIPQLELAKKLVTYSPGNF-QK-KVFFSNSGTEAIEA 119 (419)
T ss_dssp EEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC-CCSCSCSCCHHHHHHHHHHHHHSSCSS-CE-EEEEESSHHHHHHH
T ss_pred EEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc-cccccccCCHHHHHHHHHHHHhCCCCc-CC-EEEEeCchHHHHHH
Confidence 5789987753 3332 7899999999886543 244333444667777777777777543 56 89999999999999
Q ss_pred HHHHccC-CCCeEEEcCCCchhHHHHHH-HcC-------------CEEEEEEcCCCCC----C------------CCHHH
Q 013883 186 TILGLIN-PGDEVILFAPFYDSYEATLS-MAG-------------AKIKCITLRPPDF----A------------IPIEE 234 (434)
Q Consensus 186 ~~~~l~~-~gd~Vlv~~p~y~~~~~~~~-~~G-------------~~~~~v~~~~~~~----~------------~d~~~ 234 (434)
+++.+.. +||+|++.+|+|+++..... ..| .+++.+|++. ++ + +|++.
T Consensus 120 ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~g~~~~~~~~~~~~~~~~~ 198 (419)
T 2eo5_A 120 SIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPN-PYRNPWHINGYENPSELVNRVIEF 198 (419)
T ss_dssp HHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCC-SSSCTTCCCTTTCHHHHHHHHHHH
T ss_pred HHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCc-cccccccccccccchhhHHHHHHH
Confidence 9987654 48999999999986544322 221 3567777753 22 2 36889
Q ss_pred HH-hhccc-----CCcEEEecCC-CCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCce
Q 013883 235 LK-STISK-----NTRAILMNTP-HNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERT 306 (434)
Q Consensus 235 l~-~~i~~-----~~~~i~~~~p-~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~ 306 (434)
|+ +++++ ++++| +++| |||||. +++.+++++|+++|++||+++|+||+|.+|.+.+....+... +...+
T Consensus 199 l~~~~i~~~~~~~~~~~v-i~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~-~~~~d- 275 (419)
T 2eo5_A 199 IEDYIFVNLVPPEEVAGI-FFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENF-NTVPD- 275 (419)
T ss_dssp HHHTHHHHTCCGGGEEEE-EECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGG-TCCCS-
T ss_pred HHHHHHhhccCCCCEEEE-EEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhc-CCCCC-
Confidence 99 88863 34444 4566 567896 678888999999999999999999999988765543222222 12223
Q ss_pred EEEccCChhhcccc-ceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhh
Q 013883 307 VTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLN 385 (434)
Q Consensus 307 i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~ 385 (434)
+.||||.+| .| +|+||++++++++ .+ ......+++.+.+++.++.++|+.. ++++++++++++.+.+.|+
T Consensus 276 --~~t~sK~~~-~G~~riG~~~~~~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~~----~~~~~~~~~~~~~l~~~L~ 346 (419)
T 2eo5_A 276 --VITLAKALG-GGIMPIGATIFRKDLD-FK-PGMHSNTFGGNALACAIGSKVIDIV----KDLLPHVNEIGKIFAEELQ 346 (419)
T ss_dssp --EEEECGGGG-TTTSCCEEEEEEGGGC-CC-------CCCCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHT
T ss_pred --EEEeccccc-CCccceEEEEEchHhh-cC-CcccCCCCCCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 338999999 69 9999999998887 66 3233457888999999999999852 2377889999999999998
Q ss_pred hCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 386 AVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
++ +...++.|. |+++++.+.. .... ++++|+ ++||.+.|+
T Consensus 347 ~~-~~~~~~~g~-~~~i~~~~~~-~~~~-~~~~l~-~~Gv~v~~~ 386 (419)
T 2eo5_A 347 GL-ADDVRGIGL-AWGLEYNEKK-VRDR-IIGESF-KRGLLLLPA 386 (419)
T ss_dssp TS-SSEEEEETT-EEEEECSCHH-HHHH-HHHHHH-HTTEECEEE
T ss_pred Hh-hhheEeeeE-EEEEEEecCc-cHHH-HHHHHH-HCCCEEecC
Confidence 87 444455555 4566663211 1244 888887 459999986
No 126
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.96 E-value=1.6e-28 Score=242.69 Aligned_cols=291 Identities=14% Similarity=0.123 Sum_probs=211.6
Q ss_pred CCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEc
Q 013883 121 FDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILF 200 (434)
Q Consensus 121 ~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~ 200 (434)
.+.++.+.+++.+.+ ...|.+ +..++.+++.+.+.+.+|.+ .+++|++++|+++++..++.+++++||+|+++
T Consensus 32 ~~~~~~v~~a~~~~~---~~~~~~--~~~~~~~~l~~~la~~~~~~--~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~ 104 (393)
T 3kgw_A 32 SNLAPRVLAAGSLRM---IGHMQK--EMLQIMEEIKQGIQYVFQTR--NPLTLVVSGSGHCAMETALFNLLEPGDSFLTG 104 (393)
T ss_dssp CCCCHHHHHHTTCCC---CCTTSH--HHHHHHHHHHHHHHHHHTCC--CSEEEEESCCTTTHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCHHHHHHhcccc---cCcccH--HHHHHHHHHHHHHHHHhCCC--CCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEE
Confidence 345666666554321 112222 12233444444444444432 33259999999999999999999999999999
Q ss_pred CCCchh--HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcE
Q 013883 201 APFYDS--YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVL 277 (434)
Q Consensus 201 ~p~y~~--~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~ 277 (434)
.+.|++ +...+...|++++.+++++ ++.+|++.+++++++ ++++|++++||||||.+++ +++|.++|++||++
T Consensus 105 ~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 180 (393)
T 3kgw_A 105 TNGIWGMRAAEIADRIGARVHQMIKKP-GEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHRYQCL 180 (393)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHTTCE
T ss_pred eCCchhHHHHHHHHHcCCceEEEeCCC-CCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHHcCCE
Confidence 999864 3677888999999999875 567999999999988 9999999999999999997 66799999999999
Q ss_pred EEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhh----------------
Q 013883 278 VFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS---------------- 341 (434)
Q Consensus 278 iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~---------------- 341 (434)
+|+||+|.... ....+. ..+..+++.|++|.++ .+.++||+++++++++.+.....
T Consensus 181 li~De~~~~g~---~~~~~~----~~~~d~~~~s~sK~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (393)
T 3kgw_A 181 LLVDSVASLGG---VPIYMD----QQGIDIMYSSSQKVLN-APPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLW 252 (393)
T ss_dssp EEEECTTTTTT---SCCCTT----TTTCCEEEEESSSTTC-CCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHT
T ss_pred EEEECCccccC---cccchh----hcCCCEEEecCccccc-CCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhh
Confidence 99999987421 111111 1245688899999874 34459999999999887764321
Q ss_pred -------ccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCC----eeEEEeeecCCCCC
Q 013883 342 -------FLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSS----GTYFVVVDHTPFGH 409 (434)
Q Consensus 342 -------~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~~~~~~~~~ 409 (434)
...++.+...+.++..+++.. ++++++++++++++++.+.+.|+++|+++..+. .++++++.+.. +
T Consensus 253 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~- 330 (393)
T 3kgw_A 253 GCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPA-G- 330 (393)
T ss_dssp TCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCT-T-
T ss_pred hhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCC-C-
Confidence 113455666777777777643 234788899999999999999999998876433 35566666532 2
Q ss_pred CCHHHHHHHHHHhcCeEEECCCC
Q 013883 410 ETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 410 ~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
.+..++.++|++++||.+.||..
T Consensus 331 ~~~~~~~~~l~~~~gi~v~~g~~ 353 (393)
T 3kgw_A 331 YNWRDIVSYVLDHFSIEISGGLG 353 (393)
T ss_dssp BCHHHHHHHHHHHHCEECBCCCG
T ss_pred CCHHHHHHHHHHhCCEEEeCCcc
Confidence 25778999998877999999864
No 127
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.96 E-value=2.5e-29 Score=249.33 Aligned_cols=299 Identities=17% Similarity=0.145 Sum_probs=211.9
Q ss_pred CeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..+||+.|. ..+. +++.+.+++.+++..... +...+ ..++++++.+.+.+.++. +++ +|++++|+++++.++
T Consensus 46 ~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~-~~~~~-~~~~~~~l~~~la~~~~~--~~~-~v~~~~gg~~a~~~a 120 (395)
T 1vef_A 46 EYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMA-MPQTL-PTPMRGEFYRTLTAILPP--ELN-RVFPVNSGTEANEAA 120 (395)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCC-CCTTS-CCHHHHHHHHHHHHTSCT--TEE-EEEEESSHHHHHHHH
T ss_pred EEEEccCccccccCCCCCHHHHHHHHHHHHhCCC-Ccccc-CCHHHHHHHHHHHHhcCC--CcC-EEEEcCcHHHHHHHH
Confidence 578988774 3343 788899999998876322 21111 124455555555555543 466 899999999999999
Q ss_pred HHHcc--CCCCeEEEcCCCchh-HHHHHHHcCCE------------EEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCC
Q 013883 187 ILGLI--NPGDEVILFAPFYDS-YEATLSMAGAK------------IKCITLRPPDFAIPIEELKSTISKNTRAILMNTP 251 (434)
Q Consensus 187 ~~~l~--~~gd~Vlv~~p~y~~-~~~~~~~~G~~------------~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p 251 (434)
+.++. .+||+|++.+|+|++ +...+...|.+ +..++. .|++.+++++++++++|+++.+
T Consensus 121 l~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~------~d~~~l~~~i~~~~~~v~~~~~ 194 (395)
T 1vef_A 121 LKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY------NDVEALKRAVDEETAAVILEPV 194 (395)
T ss_dssp HHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT------TCHHHHHHHCCTTEEEEEECSE
T ss_pred HHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC------CcHHHHHHHhccCEEEEEEeCc
Confidence 98764 678999999999975 44566667765 333322 4899999999888888887777
Q ss_pred CCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeCh
Q 013883 252 HNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP 330 (434)
Q Consensus 252 ~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~ 330 (434)
+||||.++ +.+++++|+++|++||+++|+||+|.++.+.+....+... +...+++ ||||.++ .|+|+||+++++
T Consensus 195 ~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~-~~~~d~~---s~sK~~~-~g~~~G~~~~~~ 269 (395)
T 1vef_A 195 QGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHF-GIVPDIL---TLAKALG-GGVPLGVAVMRE 269 (395)
T ss_dssp ETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHH-TCCCSEE---EECGGGG-TTSSCEEEEEEH
T ss_pred cCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhc-CCCCCEE---EEccccc-CCCceEEEEehH
Confidence 89999764 6888999999999999999999999976544432221111 1112222 8899999 599999999998
Q ss_pred hhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEe--ecCCeeEEEeeecCCCC
Q 013883 331 HLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKV--FPSSGTYFVVVDHTPFG 408 (434)
Q Consensus 331 ~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~~~~~~~~~~~~ 408 (434)
++++.++......+++.+.+.+.++..+|+..++ ++..++++++++.+.+.|++++.++ ..+..+.++|+++..
T Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~-- 345 (395)
T 1vef_A 270 EVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER--TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE-- 345 (395)
T ss_dssp HHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS--
T ss_pred HHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcC--
Confidence 8776665422334567788888888888875332 3467788889999999998876421 122344567777643
Q ss_pred CCCHHHHHHHHHHhcCeEEECC
Q 013883 409 HETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 409 ~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+..+++++|++++||.+.||
T Consensus 346 --~~~~l~~~l~~~~gi~v~~~ 365 (395)
T 1vef_A 346 --KAAPYIARLEKEHRVLALQA 365 (395)
T ss_dssp --CSHHHHHHHHHHHCEECEES
T ss_pred --hHHHHHHHHHHHCCeEEecC
Confidence 25678888874569999986
No 128
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.96 E-value=4.8e-29 Score=252.88 Aligned_cols=299 Identities=19% Similarity=0.152 Sum_probs=212.2
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
..+||..+.+. +.+.+++.+++..+...|.+..+..+|+++++++++ .+ +|++|+|+++|+.+++.+
T Consensus 44 ~ylD~~~~~~~----~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~--------~~-~v~~t~ggt~A~~~al~~ 110 (467)
T 1ax4_A 44 VYIDLLTDSGT----NAMSDHQWAAMITGDEAYAGSRNYYDLKDKAKELFN--------YD-YIIPAHQGRGAENILFPV 110 (467)
T ss_dssp CSEECSCSSSC----CCEEHHHHHHHHTCCCCSSSCHHHHHHHHHHHHHHC--------CC-EEEEESSHHHHHHHHHHH
T ss_pred eeeecccCcCC----HHHHHHHHHHHhhcccccccCccHHHHHHHHHHHcC--------CC-cEEEcCCcHHHHHHHHHH
Confidence 45666544332 456666666666655678877788999999999986 24 899999999999999999
Q ss_pred ccC----CCCe---EEEcCCCchhHHHHHHHcCCEEEEEEcCC---------CCCCCCHHHHHhhccc----CCcEEEec
Q 013883 190 LIN----PGDE---VILFAPFYDSYEATLSMAGAKIKCITLRP---------PDFAIPIEELKSTISK----NTRAILMN 249 (434)
Q Consensus 190 l~~----~gd~---Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~---------~~~~~d~~~l~~~i~~----~~~~i~~~ 249 (434)
+++ +||+ |+++.+.|..+...+...|++++.++... .++.+|++.|++++++ ++++|+++
T Consensus 111 ~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~ 190 (467)
T 1ax4_A 111 LLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVST 190 (467)
T ss_dssp HHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEE
T ss_pred HHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEe
Confidence 988 9998 99998888888888999999988776431 1356899999999974 68999999
Q ss_pred CCCCCc-ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCc--c--------ccCCCCccccCCC----CCCCceEEEccCCh
Q 013883 250 TPHNPT-GKMFTREELNVIASLCIENDVLVFSDEVYDK--L--------AFEMDHISIASLP----GMYERTVTMNSLGK 314 (434)
Q Consensus 250 ~p~NPT-G~~~~~e~l~~i~~la~~~~~~iI~Deay~~--~--------~~~~~~~~~~~~~----~~~~~~i~i~S~SK 314 (434)
+||||| |.+++.+++++|+++|++||+++|+||++.. . .+.+ .++..+. ...+ +++.|+||
T Consensus 191 ~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d--~~~~s~sK 266 (467)
T 1ax4_A 191 VTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKN--ATIKEVIFDMYKYAD--ALTMSAKK 266 (467)
T ss_dssp SSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTT--CCHHHHHHHHGGGCS--EEEEETTS
T ss_pred ccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCC--Cchhhhhhhhccccc--eEEEeccc
Confidence 999999 8999999999999999999999999998643 1 1111 1111111 1112 45689999
Q ss_pred hhccc-cceeeeEEeC-h-hhHHHHHHHhhc----cccC-CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh
Q 013883 315 TFSLT-GWKIGWAIAP-P-HLTWGVRQAHSF----LTFA-TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA 386 (434)
Q Consensus 315 ~~g~~-G~R~G~~~~~-~-~~~~~l~~~~~~----~~~~-~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~ 386 (434)
.+|++ | ||++++ + ++++.+...+.. ..++ .+...+.++..+|+...+ ++..++..++++.+.+.|++
T Consensus 267 ~~g~~~G---g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~ 341 (467)
T 1ax4_A 267 DPLLNIG---GLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE--EEYLHYRIGQVKYLGDRLRE 341 (467)
T ss_dssp TTCCSSC---EEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcc---eEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHh
Confidence 99865 3 677777 6 788877655431 1222 222233333334543211 11222334667788888887
Q ss_pred CCCEeecCCeeEEEeee-------cCCCCCCCHHHHHHHHHHhcCeEEEC-CC
Q 013883 387 VGFKVFPSSGTYFVVVD-------HTPFGHETDIAFCEYLIKEVGVVAIP-TS 431 (434)
Q Consensus 387 ~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Ll~~~GV~v~p-G~ 431 (434)
.|+.+..+.+++++|++ +...+. +..+++++|++++||.+.| |+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~~g~ 393 (467)
T 1ax4_A 342 AGIPIQYPTGGHAVFVDCKKLVPQIPGDQF-PAQAVINALYLESGVRAVEIGS 393 (467)
T ss_dssp TTCCBCSSCCSSEEEEESTTTCTTSCGGGC-HHHHHHHHHHHHHCEECEEESH
T ss_pred CCCCcccCCCceEEEEehhhhccccccCCC-CHHHHHHHHHHhcCceeeecCc
Confidence 78888778888899988 321111 3667888886677999999 54
No 129
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.96 E-value=1.2e-28 Score=246.74 Aligned_cols=301 Identities=16% Similarity=0.160 Sum_probs=214.5
Q ss_pred CCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...+||..|. ..+. .++.+.+++.+++++..+ +.. .+..++++++++.+.+..| .+ +|++++|+++|+..
T Consensus 57 ~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~-~~~-~~~~~~~~~l~~~la~~~g----~~-~v~~~~ggteA~~~ 129 (420)
T 2pb2_A 57 KEYIDFAGGIAVTALGHCHPALVEALKSQGETLWH-TSN-VFTNEPALRLGRKLIDATF----AE-RVLFMNSGTEANET 129 (420)
T ss_dssp CEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCC-CCT-TSCCHHHHHHHHHHHHHSS----CS-EEEEESSHHHHHHH
T ss_pred CEEEEccccccccccCCCCHHHHHHHHHHHHhccc-ccC-ccCCHHHHHHHHHHHhhCC----CC-eEEEeCCHHHHHHH
Confidence 3578998762 2222 578899999988865322 222 1234667777777776665 45 89999999999999
Q ss_pred HHHHccC-------CC-CeEEEcCCCchhHHH-HHHHcCCE------------EEEEEcCCCCCCCCHHHHHhhcccCCc
Q 013883 186 TILGLIN-------PG-DEVILFAPFYDSYEA-TLSMAGAK------------IKCITLRPPDFAIPIEELKSTISKNTR 244 (434)
Q Consensus 186 ~~~~l~~-------~g-d~Vlv~~p~y~~~~~-~~~~~G~~------------~~~v~~~~~~~~~d~~~l~~~i~~~~~ 244 (434)
+++.+.. +| ++|++.+|+|+++.. .+...|.+ +..+|.. |++.|+++++++++
T Consensus 130 al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~------d~~~le~~i~~~~~ 203 (420)
T 2pb2_A 130 AFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFN------DLHAVKAVMDDHTC 203 (420)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTT------CHHHHHHHCCTTEE
T ss_pred HHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCC------CHHHHHHHhccCce
Confidence 9998865 67 599999999987643 44455543 4555432 79999999998899
Q ss_pred EEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccccee
Q 013883 245 AILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKI 323 (434)
Q Consensus 245 ~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~ 323 (434)
+|+++.++|++|+ +++.+++++|.++|++||+++|+||+|.++.+.+....+..+. ...+++ ||||.++ +|+|+
T Consensus 204 ~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~-~~~dii---t~sK~l~-~G~~i 278 (420)
T 2pb2_A 204 AVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYG-VTPDIL---TSAKALG-GGFPV 278 (420)
T ss_dssp EEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHT-CCCSEE---EECGGGG-TTSCC
T ss_pred EEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcC-CCCCeE---Eeccccc-CCCce
Confidence 9999888988884 6899999999999999999999999999876665433222221 112333 7899999 99999
Q ss_pred eeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--CC---EeecCCeeE
Q 013883 324 GWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV--GF---KVFPSSGTY 398 (434)
Q Consensus 324 G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~---~~~~~~~~~ 398 (434)
||+++++++++.+.......+++.+.+.+.++.++|+..++ +++.++++++++++.+.|+++ ++ ...++.|.
T Consensus 279 G~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~- 355 (420)
T 2pb2_A 279 SAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT--PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGL- 355 (420)
T ss_dssp EEEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETT-
T ss_pred EEEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecce-
Confidence 99999998877665544456788899999999888875321 355677778888888887664 22 23344444
Q ss_pred EEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 399 FVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
|+++++......+..+++++|++ +||.+.||.
T Consensus 356 ~~~v~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~ 387 (420)
T 2pb2_A 356 LIGAELKPKYKGRARDFLYAGAE-AGVMVLNAG 387 (420)
T ss_dssp EEEEEECGGGTTCHHHHHHHHHH-TTEECEESS
T ss_pred EEEEEECCCchHHHHHHHHHHHH-CCCEEEeCC
Confidence 55666643211146788888876 599999873
No 130
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.96 E-value=2.8e-29 Score=245.52 Aligned_cols=301 Identities=13% Similarity=0.040 Sum_probs=204.1
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
..+.++.|...+++++.+.+++.+.+ ....|.+..+..+|+++++++++ .+ ..++++|+++++..++.+
T Consensus 14 ~~~~~~~~~~~~g~~p~v~~ai~~~~--~~~~~~~~~~~~~l~~~la~~~~--------~~-~~i~~~~g~~a~~~a~~~ 82 (359)
T 3pj0_A 14 PYKLGGNGPRNVGVLTEALQNIDDNL--ESDIYGNGAVIEDFETKIAKILG--------KQ-SAVFFPSGTMAQQIALRI 82 (359)
T ss_dssp SEESSSSSCCBHHHHHHHTTTSCTTC--BCCBTTBSHHHHHHHHHHHHHHT--------CS-EEEEESCHHHHHHHHHHH
T ss_pred chhhcCCCccccCCCHHHHHHHHhhc--ccCcccCCHHHHHHHHHHHHHhC--------CC-cEEEeCCHHHHHHHHHHH
Confidence 44555555555555677776665532 23457666677899999999876 23 234447778999999999
Q ss_pred ccCCCCe--EEEcCCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCc-ccCCCHHH
Q 013883 190 LINPGDE--VILFAPFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPT-GKMFTREE 263 (434)
Q Consensus 190 l~~~gd~--Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPT-G~~~~~e~ 263 (434)
++.+||+ |+++.+.|..... .....|++++.++.+ ++.+|++.++++ .+++++|++++||||+ |.+++.++
T Consensus 83 ~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~ 159 (359)
T 3pj0_A 83 WADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTA--NQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEE 159 (359)
T ss_dssp HHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCT--TSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHH
T ss_pred HHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCCc--CCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHHH
Confidence 9988887 5555555544321 235679999888763 678999999998 7789999999999998 79999999
Q ss_pred HHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc
Q 013883 264 LNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 343 (434)
Q Consensus 264 l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~ 343 (434)
+++|+++|++||+++|+|++|..+...........+.. ...+++.|+||.++.++ . ||+++++++++.++..+...
T Consensus 160 l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~~d~~~~s~sK~~~~~~-g-g~~~~~~~l~~~~~~~~~~~ 235 (359)
T 3pj0_A 160 LEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICA--LFDSVYVSFYKGIGGIA-G-AILAGNDDFVQEAKIWKRRY 235 (359)
T ss_dssp HHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHT--TCSEEEEESSSTTCCSS-C-EEEEECHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhc--cCCEEEEeccccCCCcc-e-EEEECCHHHHHHHHHHHHHh
Confidence 99999999999999999999875432111111111111 11245569999987553 2 88899999999887755433
Q ss_pred ccCC--chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEee-cCCeeEEEeeecCCCCCCCHHHHHHHH
Q 013883 344 TFAT--STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVF-PSSGTYFVVVDHTPFGHETDIAFCEYL 419 (434)
Q Consensus 344 ~~~~--~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L 419 (434)
..+. ....+.++..+|++ .. +..+++.++++.+.+.|+++ |+.+. .+.++.++|+++...+..+..++.+.|
T Consensus 236 ~~~~~~~~~~~~a~~~~l~~---~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 311 (359)
T 3pj0_A 236 GGDLISLYPYILSADYYFEK---RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQ 311 (359)
T ss_dssp TCCCSCCHHHHHHHHHHHHH---HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHHH
T ss_pred CCCcchhHHHHHHHHHHHHH---HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHHH
Confidence 2222 23333333444543 22 23445678888999999987 88885 445555667766432111245666666
Q ss_pred HHhcCeEEECCCCC
Q 013883 420 IKEVGVVAIPTSVF 433 (434)
Q Consensus 420 l~~~GV~v~pG~~F 433 (434)
. ++||.+.||..|
T Consensus 312 ~-~~GV~v~~g~~~ 324 (359)
T 3pj0_A 312 D-ETGVGISGYLQE 324 (359)
T ss_dssp H-HHCEECCSCCEE
T ss_pred H-hcCcEecCCccc
Confidence 5 569999999765
No 131
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.96 E-value=4.2e-28 Score=238.36 Aligned_cols=288 Identities=12% Similarity=0.082 Sum_probs=206.7
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCCC-----CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc----C
Q 013883 122 DGPDFVKDAAIQAIRDGKNQYARG-----HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI----N 192 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~~~Y~~~-----~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~----~ 192 (434)
++++.+.+++.+.+.+. ..++.. .+..++.+.+.+.+.+.+|. +++ +|++++|+++++.+++.++. +
T Consensus 11 ~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~-~i~~~~g~~~a~~~~~~~~~~~~~~ 86 (382)
T 4hvk_A 11 PVDERILEAMLPYMTES-FGNPSSVHSYGFKAREAVQEAREKVAKLVNG--GGG-TVVFTSGATEANNLAIIGYAMRNAR 86 (382)
T ss_dssp CCCHHHHHHHHHHHHTS-CCCTTCSSHHHHHHHHHHHHHHHHHHHHTTC--TTE-EEEEESSHHHHHHHHHHHHHHHHGG
T ss_pred CCCHHHHHHHHHHHHhh-cCCCcccchHHHHHHHHHHHHHHHHHHHcCC--CcC-eEEEECCchHHHHHHHHHhhhhhcC
Confidence 45778888988888652 222211 12234444555555555553 466 89999999999999999988 9
Q ss_pred CCCeEEEcCCCchhHHHHHHH---cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHH
Q 013883 193 PGDEVILFAPFYDSYEATLSM---AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 193 ~gd~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
+||+|+++++.|+.+...+.. .|++++.++.++ ++.+|++.+++++++++++|++++|+||||.+.+ +++|.+
T Consensus 87 ~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~ 162 (382)
T 4hvk_A 87 KGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK-YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEEISE 162 (382)
T ss_dssp GCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT-TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHH
T ss_pred CCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC-CCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---HHHHHH
Confidence 999999999999998776554 699999999884 6789999999999999999999999999999987 557889
Q ss_pred HHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHH-------hhc
Q 013883 270 LCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA-------HSF 342 (434)
Q Consensus 270 la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~-------~~~ 342 (434)
+|++||+ +|+|++|..... ...+.. .+..+++.|++|.+|.+| +|+++++++. .+... ...
T Consensus 163 l~~~~~~-li~D~a~~~~~~---~~~~~~----~~~d~~~~s~~K~~g~~g--~g~~~~~~~~--~~~~~~~~~~~~~~~ 230 (382)
T 4hvk_A 163 VLAGKAA-LHIDATASVGQI---EVDVEK----IGADMLTISSNDIYGPKG--VGALWIRKEA--KLQPVILGGGQENGL 230 (382)
T ss_dssp HHSSSSE-EEEECTTTBTTB---CCCHHH----HTCSEEEEESGGGTSCTT--CEEEEEETTC--CCCCSSCSSCTGGGT
T ss_pred HHHHcCE-EEEEhHHhcCCC---CCCchh----cCCCEEEEeHHHhcCCCc--eEEEEEcCcc--CcCcccccCCCcCcc
Confidence 9999999 999999874221 111111 134588999999888666 7777776553 11111 111
Q ss_pred cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCe---eEEEeeecCCCCCCCHHHHHHH
Q 013883 343 LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSG---TYFVVVDHTPFGHETDIAFCEY 418 (434)
Q Consensus 343 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 418 (434)
...+.+...+.++..+++...+++++.+++++++++.+.+.|+++ |+.+..+.+ ..++++.+. + .+..++.+.
T Consensus 231 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~ 307 (382)
T 4hvk_A 231 RSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS--Y-IEGESIVLS 307 (382)
T ss_dssp SCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET--T-CCHHHHHHH
T ss_pred ccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEEC--C-CCHHHHHHH
Confidence 234456666777767766445678889999999999999999987 788776553 223444442 2 257788887
Q ss_pred HHHhcCeEEECCCCC
Q 013883 419 LIKEVGVVAIPTSVF 433 (434)
Q Consensus 419 Ll~~~GV~v~pG~~F 433 (434)
|.+ +||.+.||..|
T Consensus 308 l~~-~gi~v~~g~~~ 321 (382)
T 4hvk_A 308 LDM-AGIQASTGSAC 321 (382)
T ss_dssp HHH-TTCBCBCC---
T ss_pred HHH-CCEEEeeCCcc
Confidence 755 59999999765
No 132
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.96 E-value=3.8e-28 Score=240.95 Aligned_cols=300 Identities=14% Similarity=0.112 Sum_probs=212.9
Q ss_pred CeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..+||..+. ..+. .+|.+.+++.+++.+..+.|. .+..++++++++++.+..| ++ +|++++|+++++..+
T Consensus 37 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~~----~~-~v~~~~gg~ea~~~a 109 (395)
T 3nx3_A 37 KYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSN--LYYNENIAAAAKNLAKASA----LE-RVFFTNSGTESIEGA 109 (395)
T ss_dssp EEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCT--TSBCHHHHHHHHHHHHHHT----CS-EEEEESSHHHHHHHH
T ss_pred EEEECCCcHHhccCCCCCHHHHHHHHHHHHhcccccc--ccCCHHHHHHHHHHHHhcC----CC-eEEEeCCHHHHHHHH
Confidence 578998773 2233 478899999998876443332 2334666777777776665 45 899999999999999
Q ss_pred HHHcc-------CCCCeEEEcCCCchhHHHHHHHcC-------------CEEEEEEcCCCCCCCCHHHHHhhcccCCcEE
Q 013883 187 ILGLI-------NPGDEVILFAPFYDSYEATLSMAG-------------AKIKCITLRPPDFAIPIEELKSTISKNTRAI 246 (434)
Q Consensus 187 ~~~l~-------~~gd~Vlv~~p~y~~~~~~~~~~G-------------~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i 246 (434)
++.+. .++|+|++.+|+|+++.......+ .++..++.+ |++.+++++++++++|
T Consensus 110 l~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~l~~~l~~~~~~v 183 (395)
T 3nx3_A 110 MKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN------DISSVEKLVNEKTCAI 183 (395)
T ss_dssp HHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT------CHHHHHTTCCTTEEEE
T ss_pred HHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC------CHHHHHHhccCCeEEE
Confidence 88775 457999999999987654433332 345555543 7999999999888899
Q ss_pred EecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeee
Q 013883 247 LMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGW 325 (434)
Q Consensus 247 ~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~ 325 (434)
++++++|++|.. ++.+++++|.++|++||+++|+||+|.+|...+.......... ...+.||||.++ .|+|+||
T Consensus 184 ~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~----~~d~~t~sK~~~-~G~~~G~ 258 (395)
T 3nx3_A 184 ILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQI----LPDIMTSAKALG-CGLSVGA 258 (395)
T ss_dssp EEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC----CCSEEEECGGGT-TTSCCEE
T ss_pred EEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCC----CCCEEEeccccc-CCCceEE
Confidence 888888888776 6788899999999999999999999998865554332222211 122558999999 6999999
Q ss_pred EEeChhh-HHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCC-CEeecCCeeEEEe
Q 013883 326 AIAPPHL-TWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVG-FKVFPSSGTYFVV 401 (434)
Q Consensus 326 ~~~~~~~-~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~ 401 (434)
+++++++ ++.+.......+++.+++++.++.++|+.. ++++++.++..+..++.+.+.+.+.+ +...++.|. |++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~-~~~ 337 (395)
T 3nx3_A 259 FVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGF-MQG 337 (395)
T ss_dssp EEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETT-EEE
T ss_pred EEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEE-EEE
Confidence 9999998 777765544567888999999998888742 23444445544555555555554443 344444444 556
Q ss_pred eecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 402 VDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 402 ~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.+... .+..+++++|+++ ||.+.||.
T Consensus 338 ~~~~~~--~~~~~~~~~l~~~-Gi~v~~~~ 364 (395)
T 3nx3_A 338 LSLDKS--VKVAKVIQKCQEN-ALLLISCG 364 (395)
T ss_dssp EEECTT--SCHHHHHHHHHHT-TEECEEET
T ss_pred EEeCCc--chHHHHHHHHHHC-CCEEecCC
Confidence 665431 2477888888765 99999873
No 133
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.96 E-value=6.1e-28 Score=237.44 Aligned_cols=298 Identities=14% Similarity=0.144 Sum_probs=213.7
Q ss_pred eeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc
Q 013883 111 AINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL 190 (434)
Q Consensus 111 ~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l 190 (434)
..+|+-| | .+.++.+.+++.+.+. ..|.+ +..++.+++.+++.+.+|.+.+.+ .+++++|+++++.+++.++
T Consensus 20 ~~~~~pg-p-~~~~~~v~~a~~~~~~---~~~~~--~~~~~~~~~~~~la~~~g~~~~~~-~i~~~~ggt~al~~~~~~~ 91 (376)
T 3f0h_A 20 MLNFTVG-P-VMSSEEVRAIGAEQVP---YFRTT--EFSSTMLENEKFMLEYAKAPEGSK-AVFMTCSSTGSMEAVVMNC 91 (376)
T ss_dssp CEECSSS-S-CCCCHHHHHHHTSCCC---CCSSH--HHHHHHHHHHHHHHHHHTCCTTCE-EEEESSCHHHHHHHHHHHH
T ss_pred ceeecCC-C-CCCcHHHHHHhcCCCC---CCCCH--HHHHHHHHHHHHHHHHhCCCCCce-EEEEcCChhHHHHHHHHhc
Confidence 4566544 2 3456777766654331 12222 334667777777777777653333 5666999999999999999
Q ss_pred cCCCCeEEEcCCCchhHH--HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 191 INPGDEVILFAPFYDSYE--ATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 191 ~~~gd~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+++||+|++++|.|+++. ..+...|++++.++.++ ++.+|++.+++++++++++|++++|+||||.+++ +++|+
T Consensus 92 ~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~ 167 (376)
T 3f0h_A 92 FTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEH-GKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD---TMMIG 167 (376)
T ss_dssp CCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECCT-TCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC---HHHHH
T ss_pred cCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC-CCCCCHHHHHHhhccCceEEEEecccCCcceecC---HHHHH
Confidence 999999999999877754 34677899999999874 6889999999999889999999999999999998 77899
Q ss_pred HHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc-cccceeeeEEeChhhHHHHHHHhh------
Q 013883 269 SLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIAPPHLTWGVRQAHS------ 341 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~~~~~~~~l~~~~~------ 341 (434)
++|++||+++|+|++|..+... ..+.. .+..+++.|++|.++ .+| +|++++++++++.+.....
T Consensus 168 ~l~~~~~~~li~D~~~~~~~~~---~~~~~----~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~ 238 (376)
T 3f0h_A 168 EFCKKNNMFFVCDCVSAFLADP---FNMNE----CGADVMITGSQKVLACPPG--ISVIVLAPRGVERVEKSKVRTMYFD 238 (376)
T ss_dssp HHHHHTTCEEEEECTTTTTTSC---CCHHH----HTCSEEEEETTTTTCCCSS--CEEEEECHHHHHHHHTCCCCCSTTC
T ss_pred HHHHHcCCEEEEEcCccccCcc---ccccc----cCccEEEecCcccccCCCc--eEEEEECHHHHHHhhcCCCCceeec
Confidence 9999999999999999865321 11111 123588999999998 555 7889999998887764211
Q ss_pred -----------ccccCCchHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCC
Q 013883 342 -----------FLTFATSTPMQWAATAALRAPET--YYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFG 408 (434)
Q Consensus 342 -----------~~~~~~~~~~q~a~~~~L~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 408 (434)
...++++...+.++..+++...+ .+++++++++++++.+.+.|+++|+.+.++.....++.-. +.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~~~ 317 (376)
T 3f0h_A 239 LKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVH-PTT 317 (376)
T ss_dssp HHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEE-ESS
T ss_pred HHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEe-CCC
Confidence 11234444444555555553222 4778889999999999999999888776544322222111 122
Q ss_pred CCCHHHHHHHHHHhcCeEEECCC
Q 013883 409 HETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 409 ~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
. +..++.++|.+++||.+.||.
T Consensus 318 ~-~~~~l~~~l~~~~gi~v~~g~ 339 (376)
T 3f0h_A 318 A-NAYDIFLKLKDEYGIWICPNG 339 (376)
T ss_dssp S-CHHHHHHHHHHHSSEECEECC
T ss_pred C-CHHHHHHHHHHhCCEEEecCc
Confidence 2 577899999877799999984
No 134
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.96 E-value=3e-28 Score=242.22 Aligned_cols=288 Identities=19% Similarity=0.201 Sum_probs=215.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.|||+.|.|.++ +.+.+++.+.+... .|.+..+..+++++++++++ .+ ++++++|+++++..++.+
T Consensus 31 ~~id~~~~~~~~~--~~v~~a~~~~~~~~--~y~~~~~~~~l~~~la~~~~--------~~-~~v~~~~Gt~a~~~~l~~ 97 (399)
T 2oga_A 31 PFLDLKAAYEELR--AETDAAIARVLDSG--RYLLGPELEGFEAEFAAYCE--------TD-HAVGVNSGMDALQLALRG 97 (399)
T ss_dssp CSCCHHHHHHHTH--HHHHHHHHHHHHHT--CCSSSHHHHHHHHHHHHHTT--------SS-EEEEESCHHHHHHHHHHH
T ss_pred cccccCcCCCCCC--HHHHHHHHHHHhcC--CCCCchhHHHHHHHHHHHHC--------CC-eEEEecCHHHHHHHHHHH
Confidence 5678888876554 77888888887653 57666678899999999876 22 466677779999999999
Q ss_pred c-cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 190 L-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 190 l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+ +++||+|+++.|+|+.+...+...|++++.++++++++.+|++.+++++++++++|+ |+||||.+.+ +++|.
T Consensus 98 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~ 171 (399)
T 2oga_A 98 LGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD---MDALR 171 (399)
T ss_dssp TTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHH
T ss_pred hCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC---HHHHH
Confidence 9 899999999999999999999999999999998865688999999999988888776 5789999875 67799
Q ss_pred HHHHHcCcEEEEcCcCCccc-cCCCCccccCCCCCCCceEEEccC--ChhhccccceeeeEEeC-hhhHHHHHHHhhcc-
Q 013883 269 SLCIENDVLVFSDEVYDKLA-FEMDHISIASLPGMYERTVTMNSL--GKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFL- 343 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~-~~~~~~~~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~- 343 (434)
++|+++|+++|+||+|..+. +++. .+..+ ..+++.|+ +|.+|.+| |+||++++ +++++.++......
T Consensus 172 ~l~~~~~~~li~Dea~~~g~~~~~~--~~~~~-----~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~ 243 (399)
T 2oga_A 172 ELADRHGLHIVEDAAQAHGARYRGR--RIGAG-----SSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGS 243 (399)
T ss_dssp HHHHHHTCEECEECTTCTTCEETTE--ETTCT-----TCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTC
T ss_pred HHHHHcCCEEEEECcccccCccCCe--ecccc-----cCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCc
Confidence 99999999999999998753 3222 11111 13788888 79999769 99999986 88888887655421
Q ss_pred -----------ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEee-cCCeeEEEeeecCCCCCC
Q 013883 344 -----------TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVF-PSSGTYFVVVDHTPFGHE 410 (434)
Q Consensus 344 -----------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~ 410 (434)
++..+.+.+.++...|+. +++..++.+++++.+.+.|+++ |+.+. .++++.++|+.+.... .
T Consensus 244 ~~~~~~~~~g~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-~ 318 (399)
T 2oga_A 244 RQKYSHETKGTNSRLDEMQAAVLRIRLAH----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRT-E 318 (399)
T ss_dssp SSTTCCCSCCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEEC-S
T ss_pred cccccccccccCCCcCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEEC-C
Confidence 124456666666667764 3344555666778888889886 77654 2444444442221111 2
Q ss_pred CHHHHHHHHHHhcCeEEECC
Q 013883 411 TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 411 ~~~~~~~~Ll~~~GV~v~pG 430 (434)
+..++.+.|.+ +||.+.++
T Consensus 319 ~~~~l~~~L~~-~gI~v~~~ 337 (399)
T 2oga_A 319 RRDELRSHLDA-RGIDTLTH 337 (399)
T ss_dssp SHHHHHHHHHH-TTBCCBCS
T ss_pred CHHHHHHHHHH-CCCceecC
Confidence 57788888865 59999875
No 135
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.96 E-value=2.7e-29 Score=245.64 Aligned_cols=272 Identities=14% Similarity=0.106 Sum_probs=189.7
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCC--eEEEcCCCchhHHH---HHHHc
Q 013883 140 NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGD--EVILFAPFYDSYEA---TLSMA 214 (434)
Q Consensus 140 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd--~Vlv~~p~y~~~~~---~~~~~ 214 (434)
..|++..+..+|+++++++++ . +..+++ +|+++++..++.+++.+|| .|+++.+.|..+.. .....
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~------~--~~~i~~-~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~ 111 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLG------M--DDAVFF-PSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELH 111 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHT------C--SEEEEE-SCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHS
T ss_pred ccccCChHHHHHHHHHHHHhC------C--CcEEEe-cCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhcc
Confidence 457776788999999999886 2 324444 6678899999999999988 67777666655433 45567
Q ss_pred CCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCc-ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCC
Q 013883 215 GAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPT-GKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDH 293 (434)
Q Consensus 215 G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPT-G~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~ 293 (434)
|++++.++. +++.+|+++++++. ++++|++++||||| |.+++.+++++|+++|++||+++|+||+|.........
T Consensus 112 g~~~~~v~~--~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 187 (357)
T 3lws_A 112 PIETILVGA--ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE 187 (357)
T ss_dssp SCEEEECSC--TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred CcEEEEecC--CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence 999888774 36789999999884 38999999999998 99999999999999999999999999998622111001
Q ss_pred ccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCC--chHHHHHHHHHHhCChHHHHHHHH
Q 013883 294 ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT--STPMQWAATAALRAPETYYEELKR 371 (434)
Q Consensus 294 ~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~--~~~~q~a~~~~L~~~~~~~~~~~~ 371 (434)
.....+....+ +++.|+||.++.++ .||+++++++++.++..+.....+. ....+.++..+|++ +.+. .+
T Consensus 188 ~~~~~~~~~~d--~~~~s~sK~~~~~~--gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~-~~ 259 (357)
T 3lws_A 188 KTAAEIAGLFD--SIYISFYKGLGGIA--GAILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL---RKDR-MG 259 (357)
T ss_dssp CCHHHHHTTSS--EEEEESSSTTCCSS--CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH---HTTC-HH
T ss_pred CChHHHHhcCC--EEEEeccccCCCCc--eEEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH---HHHH-HH
Confidence 11111211223 34789999993233 2999999999998876654333222 23344444455553 3333 33
Q ss_pred HHHHHHHHHHHHhhhC-CCEee-cCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 372 DYSAKKAILVEGLNAV-GFKVF-PSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 372 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
++.++++.+.+.|+++ |+.+. .+.+++|+|+++...+..+..++.+.|. ++||.+.||..|
T Consensus 260 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~g~~~ 322 (357)
T 3lws_A 260 QYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQE-ETGLGFVGYLVD 322 (357)
T ss_dssp HHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHH-HHCEESCSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHH-hcCeEEeccccc
Confidence 4677888999999987 88884 4556667888874321112456766664 569999998543
No 136
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.96 E-value=1e-28 Score=248.60 Aligned_cols=310 Identities=15% Similarity=0.089 Sum_probs=209.9
Q ss_pred CeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..+||+.|.+ .+. .++.+.+++.+++.+. ..|....|..++++++++++.+.++...+ + ++++++|+++++..+
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~-~v~~~~ggsea~~~a 120 (439)
T 3dxv_A 44 ELIDLSGAWGAASLGYGHPAIVAAVSAAAANP-AGATILSASNAPAVTLAERLLASFPGEGT-H-KIWFGHSGSDANEAA 120 (439)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHSC-SCSCSSSSEEHHHHHHHHHHHHTTTCTTT-E-EEEEESSHHHHHHHH
T ss_pred EEEECCCchhhccCCCCCHHHHHHHHHHHHhc-cCccccccCCHHHHHHHHHHHHhCCCCCC-C-EEEEeCCHHHHHHHH
Confidence 5799998865 233 6889999999988764 44665667778899999999887754332 5 899999999999999
Q ss_pred HHHc--cCCCCeEEEcCCCchhHHHHHHHcCCE-E--------------EEEEcCCCCCCC----CHHHHHhhc----cc
Q 013883 187 ILGL--INPGDEVILFAPFYDSYEATLSMAGAK-I--------------KCITLRPPDFAI----PIEELKSTI----SK 241 (434)
Q Consensus 187 ~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~G~~-~--------------~~v~~~~~~~~~----d~~~l~~~i----~~ 241 (434)
++.+ ..+++.|++.+|.|+++......++.. . ..+|++...... |++.|++++ .+
T Consensus 121 l~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 200 (439)
T 3dxv_A 121 YRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAG 200 (439)
T ss_dssp HHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCC
Confidence 9875 346678999999997765544443322 1 122222111111 689999999 44
Q ss_pred CCcEEEecCCCCCcccCCC-HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc
Q 013883 242 NTRAILMNTPHNPTGKMFT-REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG 320 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~~~~-~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 320 (434)
++++|+++.++|++|.+.+ .+.+++|+++|++||+++|+||+|.+|.+.+.......+.. ..+ +.||||.++ +|
T Consensus 201 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~~d---i~s~sK~~~-~G 275 (439)
T 3dxv_A 201 SIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-VPD---ILVLGKGLG-GG 275 (439)
T ss_dssp CEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-CCS---EEEECGGGG-TT
T ss_pred CEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-CCC---EEEEcchhc-CC
Confidence 6778888888888888664 45599999999999999999999998765554333222221 122 239999999 79
Q ss_pred ceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhh----hCC-CEeecCC
Q 013883 321 WKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLN----AVG-FKVFPSS 395 (434)
Q Consensus 321 ~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~----~~g-~~~~~~~ 395 (434)
+|+||+++++++++.+.......++ .+++++.++.++|+..++ +++.++++++++.+++.|+ +.+ +...++.
T Consensus 276 ~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 352 (439)
T 3dxv_A 276 LPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR--DDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGR 352 (439)
T ss_dssp SCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred cceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE
Confidence 9999999999988777655445567 888888888888874221 2233444444444444444 343 3444555
Q ss_pred eeEEEeeecCCC------CCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 396 GTYFVVVDHTPF------GHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 396 ~~~~~~~~~~~~------~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
|.| +++.+... ...+..+++++|+++ ||.+.||..
T Consensus 353 g~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~ 393 (439)
T 3dxv_A 353 GLA-CGMELVCDRQSREPARAETAKLIYRAYQL-GLVVYYVGM 393 (439)
T ss_dssp TTE-EEEEEEEETTTTEECHHHHHHHHHHHHHH-TEECEEEST
T ss_pred EEE-EEEEEecCccccCCCHHHHHHHHHHHHHC-CcEEeecCC
Confidence 554 44544210 111245788888766 999999753
No 137
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.96 E-value=8.6e-28 Score=243.46 Aligned_cols=313 Identities=13% Similarity=0.025 Sum_probs=220.9
Q ss_pred CCeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQG--FPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..| ...+. .+|.+.+++.+++.+..+.|....+..++++++++.+.+..+ .+.+ +|++++|+++|+..
T Consensus 51 ~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~-~v~~~~gGseA~~~ 127 (460)
T 3gju_A 51 RKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAP--KGMS-RVYFGLSGSDANET 127 (460)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSC--TTEE-EEEEESSHHHHHHH
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCC--CCcC-EEEEeCchHHHHHH
Confidence 357898876 22232 468899999998877555566555666788888888887654 3455 89999999999999
Q ss_pred HHHHccC--------CCCeEEEcCCCchhHHHHHHHcCC-------------EEEEEEcCC----CCCCCC--------H
Q 013883 186 TILGLIN--------PGDEVILFAPFYDSYEATLSMAGA-------------KIKCITLRP----PDFAIP--------I 232 (434)
Q Consensus 186 ~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~----~~~~~d--------~ 232 (434)
+++.+.. ++++|++.+|+|+++......++. .+..++... .+.+.+ +
T Consensus 128 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~ 207 (460)
T 3gju_A 128 NIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCA 207 (460)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHH
Confidence 9988874 468999999999987665544322 344454321 123344 6
Q ss_pred HHHHhhcc----cCCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceE
Q 013883 233 EELKSTIS----KNTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTV 307 (434)
Q Consensus 233 ~~l~~~i~----~~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i 307 (434)
+.|++++. +++++|+++.++|++|. +++.+.+++|.++|++||+++|+||+|.+|.+.+.......+...++
T Consensus 208 ~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pd--- 284 (460)
T 3gju_A 208 DKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPD--- 284 (460)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCS---
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCC---
Confidence 88888886 35566777666778887 77888899999999999999999999999866654332222221222
Q ss_pred EEccCChhhcccc-ceeeeEEeChhhHHHHHHH-------hhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHH
Q 013883 308 TMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQA-------HSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKK 377 (434)
Q Consensus 308 ~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~ 377 (434)
+.+|||.++ .| +|+||+++++++++.+... ....+++.+++++.++.++|+.. +++++++++..+..+
T Consensus 285 -i~t~sK~l~-gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~ 362 (460)
T 3gju_A 285 -LITIAKGLT-SAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFR 362 (460)
T ss_dssp -EEEECGGGT-TTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred -eeeeehhhc-CCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 447899998 56 8999999999999888643 33457888999999999999742 345666677777777
Q ss_pred HHHHHHhhhCC-CEeecCCeeEEEeeecCCCCC---------CCHHHHHHHHHHhcCeEEECCC
Q 013883 378 AILVEGLNAVG-FKVFPSSGTYFVVVDHTPFGH---------ETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 378 ~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.+.+.+++.+ +..+++.|.|+ ++.+..... ....++++.|+++ ||.+.|+.
T Consensus 363 ~~l~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~ 424 (460)
T 3gju_A 363 AELAKAVGGHKNVGEVRGDGMLA-AVEFVADKDDRVFFDASQKIGPQVATALAAS-GVIGRAMP 424 (460)
T ss_dssp HHHHHHHTTSTTEEEEEEETTEE-EEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECEECS
T ss_pred HHHHHHHhcCCCeEEEeeeeEEE-EEEEccCccccccccchHHHHHHHHHHHHHC-CeEEecCC
Confidence 77777777664 44555556644 444432110 0145677777765 99999975
No 138
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.96 E-value=3.2e-27 Score=233.76 Aligned_cols=288 Identities=16% Similarity=0.153 Sum_probs=214.2
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
+.|+|+. |++ ++.+.+++.+.+.+.. |.+..+..+|+++++++++ .+ ++++++|+++++.+++.+
T Consensus 9 ~~i~~~~--p~~--~~~~~~a~~~~~~~~~--~~~~~~~~~l~~~la~~~~--------~~-~~~~~~~gt~al~~~~~~ 73 (393)
T 1mdo_A 9 DFLPFSR--PAM--GAEELAAVKTVLDSGW--ITTGPKNQELEAAFCRLTG--------NQ-YAVAVSSATAGMHIALMA 73 (393)
T ss_dssp CCBCSCC--CCC--CHHHHHHHHHHHHHTC--CSSSHHHHHHHHHHHHHHC--------CS-EEEEESCHHHHHHHHHHH
T ss_pred cccccCC--CCC--CHHHHHHHHHHHhcCC--cCCChHHHHHHHHHHHHhC--------CC-cEEEecChHHHHHHHHHH
Confidence 4678875 654 3667788888887643 4455678899999999986 24 799999999999999999
Q ss_pred c-cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 190 L-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 190 l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+ +++||+|+++.|+|+.+...+...|++++.++++++++.+|++.+++++++++++|+++ ||||...+ +++|.
T Consensus 74 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~---~~~i~ 147 (393)
T 1mdo_A 74 LGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPV---HYAGAPAD---LDAIY 147 (393)
T ss_dssp TTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---HHHHH
T ss_pred cCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCC---HHHHH
Confidence 9 89999999999999999999999999999999986567899999999998888888775 48999874 77799
Q ss_pred HHHHHcCcEEEEcCcCCcc-ccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhhccc--
Q 013883 269 SLCIENDVLVFSDEVYDKL-AFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLT-- 344 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~-~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~-- 344 (434)
++|+++|+++|+||+|..+ .+.+. . +. . .++++.||+|..+++|.|+||++++ +++++.++.......
T Consensus 148 ~l~~~~~~~li~D~a~~~g~~~~~~--~---~~-~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~ 219 (393)
T 1mdo_A 148 ALGERYGIPVIEDAAHATGTSYKGR--H---IG-A--RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGV 219 (393)
T ss_dssp HHHHHHTCCBCEECTTCTTCEETTE--E---TT-S--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEEC
T ss_pred HHHHHcCCeEEEECccccCCeECCe--e---cC-C--CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcc
Confidence 9999999999999999963 34322 1 11 1 5688999994444455699999997 788888876543211
Q ss_pred ----------------------cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeec-C-----Ce
Q 013883 345 ----------------------FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFP-S-----SG 396 (434)
Q Consensus 345 ----------------------~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~-----~~ 396 (434)
+..+.+...++...++. +++..++.+++++.+.+.|++.++++.. + .+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 295 (393)
T 1mdo_A 220 DAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQK----LDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHA 295 (393)
T ss_dssp C-----------CCEESSCCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECC
T ss_pred cchhhhcccccccccccccCccCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCce
Confidence 11233434343444443 4555666667888899999888876542 2 34
Q ss_pred eEEEeeecCCC--CCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 397 TYFVVVDHTPF--GHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 397 ~~~~~~~~~~~--~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
++++|+.+... +. +..++.++|.+ +||.+.+|..
T Consensus 296 ~~~~~v~~~~~~~~~-~~~~l~~~l~~-~gi~v~~~~~ 331 (393)
T 1mdo_A 296 WHLFIIRVDEARCGI-TRDALMASLKT-KGIGTGLHFR 331 (393)
T ss_dssp CSCEEEECCHHHHSS-CHHHHHHHHHH-TTBCCBCCCC
T ss_pred eEEEEEEeccccccc-CHHHHHHHHHh-CCCCcccccC
Confidence 55677776410 22 46788888865 5999999863
No 139
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.96 E-value=2.5e-27 Score=231.40 Aligned_cols=296 Identities=12% Similarity=0.063 Sum_probs=217.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC-CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYAR-GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
+.++|.-| | .+.++.+.+++.+++.+....|.. ..+..++.+.+.+.+.+.+|.. +++ +|++++|+++++.+++.
T Consensus 4 ~~~~~~p~-p-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~-~v~~~~g~t~al~~~~~ 79 (362)
T 3ffr_A 4 NKIYFTPG-P-SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNY-EVLFLASATEIWERIIQ 79 (362)
T ss_dssp CCEEECSS-S-CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTE-EEEEESCHHHHHHHHHH
T ss_pred cceeccCC-C-cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCc-EEEEeCCchHHHHHHHH
Confidence 34566544 2 334667777787777765422222 2233466677777777777753 445 89999999999999999
Q ss_pred HccCCCCeEEEcCCCchh-HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 189 GLINPGDEVILFAPFYDS-YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 189 ~l~~~gd~Vlv~~p~y~~-~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
++.++ +.+++..+.|.. +...+...|++++.++.++ ++.+|++.++ +++++++|++++|+||||.+++ +++|
T Consensus 80 ~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~---l~~i 152 (362)
T 3ffr_A 80 NCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAAF-GKGFYPADIT--VPADAEIICLTHNETSSGVSMP---VEDI 152 (362)
T ss_dssp HHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECCT-TCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---HHHH
T ss_pred hccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCC-CCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---HHHH
Confidence 99988 555566666663 3456778899999999864 6789999998 7789999999999999999997 5668
Q ss_pred HHHHHHc-CcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc-cccceeeeEEeChhhHHHHHHHhh----
Q 013883 268 ASLCIEN-DVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIAPPHLTWGVRQAHS---- 341 (434)
Q Consensus 268 ~~la~~~-~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~~~~~~~~l~~~~~---- 341 (434)
.++|++| |+++|+|++|..+... ..+ .+..+++.|++|.++ ++| +|+++++++++++++....
T Consensus 153 ~~la~~~p~~~li~D~a~~~~~~~---~~~------~~~d~~~~s~~K~~~~~~G--~g~~~~~~~~~~~~~~~~~gg~~ 221 (362)
T 3ffr_A 153 NTFRDKNKDALIFVDAVSSLPYPK---FDW------TKIDSVFFSVQKCFGLPAG--LGVWILNDRVIEKSKALLAKRKS 221 (362)
T ss_dssp TTSGGGSTTSEEEEECTTTTTSSC---CCT------TSCSEEEEETTSTTCCCSC--CEEEEEEHHHHHHHHHHHHTTCC
T ss_pred HHHHHhCCCCEEEEecccccCCcc---cCh------hHCcEEEEecccccCCCCc--eEEEEECHHHHHHhhhccccCCC
Confidence 8899999 9999999999764321 111 114488899999998 677 6889999998888776543
Q ss_pred -----------------ccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecC----CeeE
Q 013883 342 -----------------FLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAV-GFKVFPS----SGTY 398 (434)
Q Consensus 342 -----------------~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~ 398 (434)
....+.+...+.++..+++.. ++.+++.+++++++++.+.+.|+++ |+.+.++ ..++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~ 301 (362)
T 3ffr_A 222 IGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMT 301 (362)
T ss_dssp CCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSS
T ss_pred CcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCc
Confidence 114556666677776777632 2226788889999999999999998 8887762 2345
Q ss_pred EEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 399 FVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
++|+.+.. +..++.++|.++ ||.+.||..
T Consensus 302 ~~~~~~~~----~~~~~~~~l~~~-gi~~~~g~~ 330 (362)
T 3ffr_A 302 TIVANTTM----LPGEINKILEPF-DMAVGAGYG 330 (362)
T ss_dssp EEEEEESS----CHHHHHHHHGGG-TEEEEECSG
T ss_pred eEEEecCC----CHHHHHHHHHHC-CeEEecCcc
Confidence 66666643 578899998776 999999854
No 140
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.96 E-value=1e-26 Score=232.49 Aligned_cols=292 Identities=18% Similarity=0.220 Sum_probs=210.7
Q ss_pred CCCCCCCCC-cHHHHHHHHHHHHcCCCC-CCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-c
Q 013883 115 GQGFPNFDG-PDFVKDAAIQAIRDGKNQ-YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-I 191 (434)
Q Consensus 115 ~~g~p~~~~-~~~v~~~~~~~~~~~~~~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-~ 191 (434)
+.|.|++++ ++.+.+++.+++.+.... |++..|..++++++.+.+.+.+|.+ ++++++++++++.+++.++ +
T Consensus 5 ~~g~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~-----~~i~~~~gt~al~~~~~~~~~ 79 (418)
T 2c81_A 5 FDHWPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP-----YCVPTTSGSTALMLALEALGI 79 (418)
T ss_dssp ---CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS-----EEEEESCHHHHHHHHHHHTTC
T ss_pred cCCCCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC-----cEEEeCCHHHHHHHHHHHcCC
Confidence 346787776 788999999998776544 8887886666666666666555542 3555666689999999999 8
Q ss_pred CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHH
Q 013883 192 NPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLC 271 (434)
Q Consensus 192 ~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la 271 (434)
++||+|+++.|+|..+...+...|++++.++.+++++.+|++.+++++++++++|+++ ||||... ++++|.++|
T Consensus 80 ~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~---~~~~i~~~~ 153 (418)
T 2c81_A 80 GEGDEVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDKTKAIIPV---HLFGSMA---NMDEINEIA 153 (418)
T ss_dssp CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTTEEEECCB---CCTTCCC---CHHHHHHHH
T ss_pred CCcCEEEECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCCCCeEEEEe---CCcCCcc---cHHHHHHHH
Confidence 9999999999999999999999999999999986578999999999998888888764 6899875 577899999
Q ss_pred HHcCcEEEEcCcCCccc-cCCCCccccCCCCCCCceEEEccC--ChhhccccceeeeEEeC-hhhHHHHHHHhhccc---
Q 013883 272 IENDVLVFSDEVYDKLA-FEMDHISIASLPGMYERTVTMNSL--GKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLT--- 344 (434)
Q Consensus 272 ~~~~~~iI~Deay~~~~-~~~~~~~~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~--- 344 (434)
++||+++|+||+|..+. +++. .+..+ . .+.+.|| +|.+|. | |+||++++ +++++.++.......
T Consensus 154 ~~~~~~li~D~a~~~~~~~~~~--~~~~~---~--~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~ 224 (418)
T 2c81_A 154 QEHNLFVIEDCAQSHGSVWNNQ--RAGTI---G--DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYC 224 (418)
T ss_dssp HHTTCEEEEECTTCTTCEETTE--ETTSS---S--SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEEC
T ss_pred HHCCCEEEEECcccccCccCCE--ecccc---c--ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCcccc
Confidence 99999999999999876 5432 12222 2 2667777 999995 8 99999995 788888776553321
Q ss_pred ---------cC--C---c--------hHHHHHHH-HHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEee-cCCe-eE
Q 013883 345 ---------FA--T---S--------TPMQWAAT-AALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVF-PSSG-TY 398 (434)
Q Consensus 345 ---------~~--~---~--------~~~q~a~~-~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~-~~ 398 (434)
+. . . ...+.++. ..++ ++++..++.+++++.+.+.|+++ |+.+. ++++ +.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 300 (418)
T 2c81_A 225 DDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ----ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSR 300 (418)
T ss_dssp SCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEE
T ss_pred ccccccccchhhccccccccCcCCCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcc
Confidence 11 0 0 11122211 1222 35566677777888899999887 78876 4555 33
Q ss_pred EEe----eecCC---CCCCCHHHHHHHHHHhcCeE---EECCC
Q 013883 399 FVV----VDHTP---FGHETDIAFCEYLIKEVGVV---AIPTS 431 (434)
Q Consensus 399 ~~~----~~~~~---~~~~~~~~~~~~Ll~~~GV~---v~pG~ 431 (434)
..| +.+.. .+. +..++.++|.+++||. +.+|.
T Consensus 301 ~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gI~~~~v~~~~ 342 (418)
T 2c81_A 301 QTYYGYVFRFDPVKFGGL-NADQFCEILREKLNMGTFYLHPPY 342 (418)
T ss_dssp CCCSEEEEEECGGGTTTC-CHHHHHHHHHHHHTCCTTTEECCC
T ss_pred cccEEEEEEEcccccccc-CHHHHHHHHHHcCCCCcccccccc
Confidence 222 44432 122 5778988887666999 98874
No 141
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=3.3e-27 Score=235.47 Aligned_cols=301 Identities=15% Similarity=0.089 Sum_probs=203.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCC-CCCC------CCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGK-NQYA------RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~-~~Y~------~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.|+|..+... .++.+.+++.+.+.+.. ..|+ ......++++.+.+.+.+.+|. +++ +|++++| +++
T Consensus 26 ~~i~l~~~~~~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~~-~i~~~sG-t~a 99 (417)
T 3n0l_A 26 EGLEMIASENF--TLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNC--KFA-NVQPNSG-SQA 99 (417)
T ss_dssp HSEECCTTCCC--CCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEE-ECCCSSH-HHH
T ss_pred cCeeeecccCC--CCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCC--CCc-ceEeccH-HHH
Confidence 56777554322 37788888877764321 2222 2223345666555566655554 444 6888888 799
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHH---HHHH--cCCEEEEEEcCCCCCCCCHHHHHhhcc-cCCcEEEecCCCCCcc
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEA---TLSM--AGAKIKCITLRPPDFAIPIEELKSTIS-KNTRAILMNTPHNPTG 256 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~--~G~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~i~~~~p~NPTG 256 (434)
+..++.+++++||+|++++|+|.++.. .+.. .+..++.++.+ +++.+|++.++++++ .++++|++++|+| |
T Consensus 100 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G 176 (417)
T 3n0l_A 100 NQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE-LDGRIDYEKVREIAKKEKPKLIVCGASAY--A 176 (417)
T ss_dssp HHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC-TTSSCCHHHHHHHHHHHCCSEEEECCSSC--C
T ss_pred HHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC-CCCCcCHHHHHHHHHhcCCeEEEECCccc--C
Confidence 999999999999999999999988654 3333 34455666666 577899999999998 5899999888886 7
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCC-ccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYD-KLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTW 334 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~-~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~ 334 (434)
...+ +++|.++|++||+++|+||+|. ++.+.+..... + ....+++.|+||.+ +|+|+||++++ +++.+
T Consensus 177 ~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~--~---~~~di~~~s~sK~l--~g~~~G~~~~~~~~~~~ 246 (417)
T 3n0l_A 177 RVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSP--F---PYAHVVSSTTHKTL--RGPRGGIIMTNDEELAK 246 (417)
T ss_dssp SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCC--T---TTCSEEEEESSTTT--CSCSCEEEEESCHHHHH
T ss_pred ccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCc--c---ccceEEEeeCcccc--CCCCeeEEEECCHHHHH
Confidence 7776 7789999999999999999964 44444332211 1 12458899999988 68899999998 78888
Q ss_pred HHHHHhhccccC-CchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeec-CCeeEEEeeecCCCCCCC
Q 013883 335 GVRQAHSFLTFA-TSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFP-SSGTYFVVVDHTPFGHET 411 (434)
Q Consensus 335 ~l~~~~~~~~~~-~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~ 411 (434)
.++........+ ++...+.++..++.. .++++++.+++++++++.+.+.|++.|+.+.. ...+.++|+++.+.+. +
T Consensus 247 ~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~ 325 (417)
T 3n0l_A 247 KINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDREF-S 325 (417)
T ss_dssp HHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTSSS-C
T ss_pred HHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCceeccCCCCceEEEEEcccCCC-C
Confidence 887765443333 334444454555554 34566888889999999999999998988765 2345567777654443 3
Q ss_pred HHHHHHHHHHhcCeEEECCC
Q 013883 412 DIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~pG~ 431 (434)
..++.+.| +++||.+.++.
T Consensus 326 ~~~~~~~l-~~~gi~v~~~~ 344 (417)
T 3n0l_A 326 GKDADLAL-GNAGITANKNT 344 (417)
T ss_dssp HHHHHHHH-HHTTEECEECC
T ss_pred HHHHHHHH-HHcCeEEeccc
Confidence 55555544 66799998654
No 142
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.96 E-value=5e-28 Score=244.70 Aligned_cols=315 Identities=14% Similarity=0.086 Sum_probs=215.8
Q ss_pred CCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..|. ..+. .+|.+.+++.+++.+. ..|....+..+++.++++.+.+..+.. ..+ +|++++|+++|+..
T Consensus 64 ~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~-~v~~~~sGseA~~~ 140 (453)
T 4ffc_A 64 NSFIDLGAGIAVTTVGASHPAVAAAIADQATHF-THTCFMVTPYEQYVQVAELLNALTPGD-HDK-RTALFNSGAEAVEN 140 (453)
T ss_dssp CEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHC-SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCE-EEEEESSHHHHHHH
T ss_pred CEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhc-cccccCcCCCHHHHHHHHHHHHhCCCC-CCc-EEEEeCcHHHHHHH
Confidence 3578988762 2333 3788999999988764 346555566788888888888776532 235 89999999999999
Q ss_pred HHHHcc--CCCCeEEEcCCCchhHHHHHHHcCC--------------EEEEEEcCC---CCCCCC--------HHHHHhh
Q 013883 186 TILGLI--NPGDEVILFAPFYDSYEATLSMAGA--------------KIKCITLRP---PDFAIP--------IEELKST 238 (434)
Q Consensus 186 ~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~--------------~~~~v~~~~---~~~~~d--------~~~l~~~ 238 (434)
+++.+. ..++.|++.+++|+++......++. .+..+|+.. +.++.+ ++.++++
T Consensus 141 alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~ 220 (453)
T 4ffc_A 141 AIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQ 220 (453)
T ss_dssp HHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHh
Confidence 997765 3458999999999987666554432 345555541 122333 4667777
Q ss_pred cccCCcEEEecCCCCCcc--cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhh
Q 013883 239 ISKNTRAILMNTPHNPTG--KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTF 316 (434)
Q Consensus 239 i~~~~~~i~~~~p~NPTG--~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 316 (434)
+.++..+++++.|+|++| ..++.+.+++|.++|++||+++|+||+|.+|.+.+.......+.. ...+.+|||.+
T Consensus 221 i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~----~pdi~t~sK~~ 296 (453)
T 4ffc_A 221 IGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGI----VPDIVTMAKGI 296 (453)
T ss_dssp TCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC----CCSEEEECGGG
T ss_pred cCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCC----CcchHhhhhhh
Confidence 766667777788888876 455788899999999999999999999999866554332222211 12255799999
Q ss_pred ccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCC-CEeec
Q 013883 317 SLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVG-FKVFP 393 (434)
Q Consensus 317 g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~ 393 (434)
+ .|+|+||+++++++++.+.......+++.+++++.++.++|+.. ++++++.++..+..++.+.+.+.+.+ +...+
T Consensus 297 ~-~G~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 375 (453)
T 4ffc_A 297 A-GGMPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEVR 375 (453)
T ss_dssp G-TTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEE
T ss_pred c-CCcCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 9 59999999999999887776666678899999999999988742 23344444444444555555444543 34444
Q ss_pred CCeeEEEeeecCCC-----CCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 394 SSGTYFVVVDHTPF-----GHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 394 ~~~~~~~~~~~~~~-----~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+.|. |+++.+... ......++++.|+++ ||.+.|+..|
T Consensus 376 ~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~ 418 (453)
T 4ffc_A 376 GRGA-MLAIEIVKPGTLEPDAALTKSIAAEALSQ-GVLILTCGTF 418 (453)
T ss_dssp EETT-EEEEEEBCTTSCCBCHHHHHHHHHHHHHT-TEECCEECTT
T ss_pred eece-EEEEEEecCcccCCCHHHHHHHHHHHHhC-CCEEecCCCC
Confidence 4455 455554220 011245677777665 9999997643
No 143
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.96 E-value=8.4e-28 Score=242.05 Aligned_cols=297 Identities=16% Similarity=0.146 Sum_probs=211.7
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCC---CCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKN---QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~---~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
...|||..|.+ .++ .+|.+.+++.+++.+..+ .| +.....+|++.+++++ | .+ +|++++|+++|
T Consensus 76 ~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~-~v~~~~sGseA 145 (439)
T 2oat_A 76 RKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF----N----YH-KVLPMNTGVEA 145 (439)
T ss_dssp CEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH----T----CS-EEEEESSHHHH
T ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc----C----CC-EEEEeCCHHHH
Confidence 35789988744 455 789999999998876322 12 1123355666666654 3 45 89999999999
Q ss_pred HHHHHHHcc---------CCC-CeEEEcCCCchhHHH-HHHHcC------------CEEEEEEcCCCCCCCCHHHHHhhc
Q 013883 183 IAATILGLI---------NPG-DEVILFAPFYDSYEA-TLSMAG------------AKIKCITLRPPDFAIPIEELKSTI 239 (434)
Q Consensus 183 i~~~~~~l~---------~~g-d~Vlv~~p~y~~~~~-~~~~~G------------~~~~~v~~~~~~~~~d~~~l~~~i 239 (434)
+..+++.+. .+| |+|++.+|+|+++.. .+...| .+++.+|+. |++.+++++
T Consensus 146 ~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~------d~~~le~~l 219 (439)
T 2oat_A 146 GETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN------DLPALERAL 219 (439)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSS------CHHHHHHHT
T ss_pred HHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCC------CHHHHHHHh
Confidence 999998764 367 899999999987543 444444 456666653 799999999
Q ss_pred c-cCCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc
Q 013883 240 S-KNTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS 317 (434)
Q Consensus 240 ~-~~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 317 (434)
+ +++++|+++..+|++|. .++.+++++|.++|++||+++|+||+|.+|.+.+....+..+...+| +.||||.++
T Consensus 220 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~D----i~t~sK~l~ 295 (439)
T 2oat_A 220 QDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPD----IVLLGKALS 295 (439)
T ss_dssp TSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS----EEEECGGGG
T ss_pred CCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCc----EEEeccccc
Confidence 4 56666666555678896 56889999999999999999999999988766554332222211122 239999999
Q ss_pred ccc-ceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEe---ec
Q 013883 318 LTG-WKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKV---FP 393 (434)
Q Consensus 318 ~~G-~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~---~~ 393 (434)
+| +|+||+++++++++.+.......+++.+++.+.++.++|+..++ +++.++++++++++++.|+++++.+ .+
T Consensus 296 -~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 372 (439)
T 2oat_A 296 -GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE--ENLAENADKLGIILRNELMKLPSDVVTAVR 372 (439)
T ss_dssp -TTSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHTTSCTTTEEEEE
T ss_pred -CCCCCeEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 78 99999999998877665443445788888888888888875322 2467788889999999998876542 23
Q ss_pred CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 394 SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+. +.++++.+......+..+++++|+++ ||.+.|+
T Consensus 373 ~~-g~~~~v~l~~~~~~~~~~l~~~l~~~-Gv~v~~~ 407 (439)
T 2oat_A 373 GK-GLLNAIVIKETKDWDAWKVCLRLRDN-GLLAKPT 407 (439)
T ss_dssp EE-TTEEEEEECCCSSCCHHHHHHHHHHT-TEECCBS
T ss_pred ee-eeEEEEEEecCccHHHHHHHHHHHHC-CeEEecC
Confidence 33 44566776432102467898888765 9999985
No 144
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.96 E-value=2.5e-28 Score=242.24 Aligned_cols=301 Identities=15% Similarity=0.111 Sum_probs=212.1
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC--C--CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG--K--NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~--~--~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
+.|.|..+.+. +.++.+.+++.+.+.+. . ..|....+..++.+++.+.+.+.+| ++++ +|++++|+++++.+
T Consensus 20 ~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~-~v~~~~g~t~al~~ 95 (400)
T 3vax_A 20 HMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVS--AEPD-ELIFTSGATESNNI 95 (400)
T ss_dssp --CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTT--CCGG-GEEEESCHHHHHHH
T ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcC--CCCC-cEEEeCCHHHHHHH
Confidence 45556555444 56788888888887642 1 1121111223344445555554555 3466 89999999999999
Q ss_pred HHHHcc----CCCC-eEEEcCCCchhHHHHHHH---cCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCccc
Q 013883 186 TILGLI----NPGD-EVILFAPFYDSYEATLSM---AGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGK 257 (434)
Q Consensus 186 ~~~~l~----~~gd-~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~ 257 (434)
++.+++ ++|| +|+++.+.|+.+...+.. .|++++.++.++ ++.+|++.+++++++++++|++++|+||||.
T Consensus 96 ~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~ 174 (400)
T 3vax_A 96 ALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP-SGRISVEGVMERLRPDTLLVSLMHVNNETGV 174 (400)
T ss_dssp HHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT-TCCCCHHHHHTTCCTTEEEEECCSBCTTTCB
T ss_pred HHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC-CCCcCHHHHHHhcCCCceEEEEECCCCCcee
Confidence 999998 8999 999999999987665554 699999999875 7889999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEE-eChh-hH--
Q 013883 258 MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAI-APPH-LT-- 333 (434)
Q Consensus 258 ~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~-~~~~-~~-- 333 (434)
+++ +++|.++|++||+++|+||+|..... ...+..+ ..+++.|++|.+|..| +|+++ ++++ +.
T Consensus 175 ~~~---l~~i~~la~~~~~~li~D~a~~~~~~---~~~~~~~-----~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~ 241 (400)
T 3vax_A 175 IQP---VAELAQQLRATPTYLHVDAAQGYGKV---PGDLTTP-----IDMISISGHKIGAPKG--VGALVTRRREEMDDE 241 (400)
T ss_dssp BCC---HHHHHHHHTTSSCEEEEECTTTTTTS---GGGGGSC-----CSEEEEETGGGTSCSS--CEEEEECBCSSSTTC
T ss_pred eCc---HHHHHHHHHhcCCEEEEEhhhhcCCC---CcChhhc-----CcEEEEeHHHhCCCCc--eEEEEEecchhcccc
Confidence 997 56789999999999999999985321 1111111 3488999999877555 67777 6551 11
Q ss_pred -HHHHHH-------hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCe---eEEEee
Q 013883 334 -WGVRQA-------HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSG---TYFVVV 402 (434)
Q Consensus 334 -~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~~ 402 (434)
..+... ......+.+...+.++..+++...+++++++++++++++++.+.|+..|+.+..+.+ +.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 321 (400)
T 3vax_A 242 RVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLASTSFQVNGDQDHVVPHILNL 321 (400)
T ss_dssp BCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHTTTTCEECSCTTSBCTTEEEE
T ss_pred ccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhCCCCEEEeCCcccCCCCEEEE
Confidence 011111 112234556666766667776544567888999999999999999955888876654 224444
Q ss_pred ecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 403 DHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 403 ~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
.+. + .+..++++.|. +||.+.||..|
T Consensus 322 ~~~--~-~~~~~l~~~L~--~gi~v~~g~~~ 347 (400)
T 3vax_A 322 SFE--D-VDAEAFLVTLK--DLVAVATGSAS 347 (400)
T ss_dssp ECT--T-CCHHHHHHHHH--HHHHHTTTTEE
T ss_pred EeC--C-CCHHHHHHHHh--cCcEEEecccc
Confidence 443 2 25778888886 59999998644
No 145
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.96 E-value=2.2e-27 Score=238.09 Aligned_cols=306 Identities=13% Similarity=0.113 Sum_probs=206.5
Q ss_pred CeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..+|+..+.+ .+. .++.+.+++.+++.+... +....+..+.+.++++.+.+..+ ++++ +|++++|+++++..+
T Consensus 44 ~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~--~~~~-~v~~~~ggtea~~~a 119 (429)
T 1s0a_A 44 RLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSH-VMFGGITHAPAIELCRKLVAMTP--QPLE-CVFLADSGSVAVEVA 119 (429)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSC-CCCSSEECHHHHHHHHHHHHHSC--TTCC-EEEEESSHHHHHHHH
T ss_pred EEEEcCccHhhccCCCCCHHHHHHHHHHHHhccc-ccccccCCHHHHHHHHHHHHhCC--CCCC-EEEEeCCHHHHHHHH
Confidence 5789887753 333 578899999998876422 21111112344455555555554 3566 899999999999999
Q ss_pred HHHcc---C----CCCeEEEcCCCchhHHHHHHHc-C-------------CEEEEEEcCC----CCC-CCCHHHHHhhcc
Q 013883 187 ILGLI---N----PGDEVILFAPFYDSYEATLSMA-G-------------AKIKCITLRP----PDF-AIPIEELKSTIS 240 (434)
Q Consensus 187 ~~~l~---~----~gd~Vlv~~p~y~~~~~~~~~~-G-------------~~~~~v~~~~----~~~-~~d~~~l~~~i~ 240 (434)
++.+. + |||+|++.+|+|+++....... | ..+..++.+. +.+ .+|++.++++++
T Consensus 120 i~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 199 (429)
T 1s0a_A 120 MKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMA 199 (429)
T ss_dssp HHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHH
T ss_pred HHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHH
Confidence 88653 2 6899999999998765433221 1 1234444431 123 479999999987
Q ss_pred c---CCcEEEecCC-CCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChh
Q 013883 241 K---NTRAILMNTP-HNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKT 315 (434)
Q Consensus 241 ~---~~~~i~~~~p-~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 315 (434)
+ ++++|+++.+ |||||. .++.+++++|+++|++||+++|+||+|.+|.+.+....+.... ...+ +.||||.
T Consensus 200 ~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~-~~~d---~~t~sK~ 275 (429)
T 1s0a_A 200 AHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAE-IAPD---ILCLGKA 275 (429)
T ss_dssp HHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCS---EEEECGG
T ss_pred hCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcC-CCCC---EEEeccc
Confidence 3 4555554444 699996 6678889999999999999999999999876544322222221 1222 3379999
Q ss_pred hcccc-ceeeeEEeChhhHHHHHHHh-----hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--
Q 013883 316 FSLTG-WKIGWAIAPPHLTWGVRQAH-----SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-- 387 (434)
Q Consensus 316 ~g~~G-~R~G~~~~~~~~~~~l~~~~-----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 387 (434)
++ +| +|+||+++++++++.+.... ...+++.+.+++.++.++|+..++ ++..++++++++.+.+.|+++
T Consensus 276 l~-~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~ 352 (429)
T 1s0a_A 276 LT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES--GDWQQQVADIEVQLREQLAPARD 352 (429)
T ss_dssp GG-TSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHGGGGG
T ss_pred cc-CCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHhc
Confidence 98 68 99999999999988776531 224677788999888888874211 234566777788888888764
Q ss_pred --CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 388 --GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 388 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
++...++.|. |+|+++.. + .+..+++++|++ +||.+.|+
T Consensus 353 ~~~~~~~~~~g~-~~~~~~~~-~-~~~~~l~~~l~~-~Gi~v~~~ 393 (429)
T 1s0a_A 353 AEMVADVRVLGA-IGVVETTH-P-VNMAALQKFFVE-QGVWIRPF 393 (429)
T ss_dssp CTTEEEEEEETT-EEEEEESS-C-BCHHHHHHHHHH-TTEECCCB
T ss_pred CCCEEEEEEeeE-EEEEEECC-c-ccHHHHHHHHHH-CCCEEecc
Confidence 3444455555 66777643 1 246788888875 59999884
No 146
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=1.7e-27 Score=234.77 Aligned_cols=297 Identities=11% Similarity=0.088 Sum_probs=212.6
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCC--CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGH--GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATI 187 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~--G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~ 187 (434)
+.++|..| ..+.++.+.+++.+... ..|.+.. ...+++++++++++...+ ++++ +|++++|+++++.+++
T Consensus 5 ~~~~~~p~--p~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~-~v~~~~g~t~al~~~~ 76 (385)
T 2bkw_A 5 VDTLLIPG--PIILSGAVQKALDVPSL---GHTSPEFVSIFQRVLKNTRAVFKSAAA--SKSQ-PFVLAGSGTLGWDIFA 76 (385)
T ss_dssp CCEECSSS--SCCCCHHHHHTTSCCCC---CTTSHHHHHHHHHHHHHHHHHTTCCGG--GTCE-EEEEESCTTHHHHHHH
T ss_pred cceeecCC--CcCchHHHHHHHhcccc---ccCCHHHHHHHHHHHHHHHHHhCCCCC--CCCc-eEEEcCchHHHHHHHH
Confidence 44666655 23345555555433221 1232211 245677788887765433 3456 8999999999999999
Q ss_pred HHcc---CCCCeEEEc-CCCchhHH-HHHHHcCCEEEEEEc-CCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCC
Q 013883 188 LGLI---NPGDEVILF-APFYDSYE-ATLSMAGAKIKCITL-RPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFT 260 (434)
Q Consensus 188 ~~l~---~~gd~Vlv~-~p~y~~~~-~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~ 260 (434)
.++. ++||+|+++ .|.|+.+. ..+...|++++.++. + +++.+|++.+++++++ ++++|++++|+||||.+++
T Consensus 77 ~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 155 (385)
T 2bkw_A 77 SNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLK-IGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD 155 (385)
T ss_dssp HHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSS-TTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC
T ss_pred HHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCC-CCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcC
Confidence 9998 899999887 56676663 677889999999998 5 3677999999999987 8999999999999999997
Q ss_pred HHHHHHHHHHHHHc--CcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc-cccceeeeEEeChhhHH-HH
Q 013883 261 REELNVIASLCIEN--DVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIAPPHLTW-GV 336 (434)
Q Consensus 261 ~e~l~~i~~la~~~--~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~~~~~~~-~l 336 (434)
+++|+++|++| |+++|+||+|.... .... +. ..+.++++.|++|.++ .+| +||+++++++++ .+
T Consensus 156 ---l~~i~~~~~~~~~~~~li~D~a~~~~~---~~~~---~~-~~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l 223 (385)
T 2bkw_A 156 ---LKAISQAIKQTSPETFFVVDAVCSIGC---EEFE---FD-EWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYAL 223 (385)
T ss_dssp ---HHHHHHHHHHHCTTSEEEEECTTTTTT---SCCC---TT-TTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHT
T ss_pred ---HHHHHHHHHhhCCCCEEEEECccccCC---cccc---cc-ccCceEEEecCccccccCCc--ceEEEEcHHHHHHHH
Confidence 56799999999 99999999997422 1111 21 1245688999999764 556 599999988776 43
Q ss_pred HH------------------H-hhcc------ccCCchHHHHHHHHHHhCChHH-HHHHHHHHHHHHHHHHHHh-hhCCC
Q 013883 337 RQ------------------A-HSFL------TFATSTPMQWAATAALRAPETY-YEELKRDYSAKKAILVEGL-NAVGF 389 (434)
Q Consensus 337 ~~------------------~-~~~~------~~~~~~~~q~a~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L-~~~g~ 389 (434)
+. . .... ..+.+...+.++..+|+...++ +++++++++++++.+.+.| +++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 303 (385)
T 2bkw_A 224 NDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQL 303 (385)
T ss_dssp CHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred hhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 21 0 1111 1346666677777777653333 6778899999999999999 88888
Q ss_pred EeecCC-----eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 390 KVFPSS-----GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 390 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
.+..+. .+.++++.+. +..+++++|.+ +||.+.||..|
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~-~gi~v~~g~~~ 346 (385)
T 2bkw_A 304 TSVSRYPSNMSAHGLTAVYVA-----DPPDVIAFLKS-HGVVIAGGIHK 346 (385)
T ss_dssp EESSCSSSTTBCSSCEEEECS-----CHHHHHHHHHH-TTEECBCCCCT
T ss_pred eecccCcccccCCceEEEecC-----CHHHHHHHHHH-CCeEEeCCCCc
Confidence 887532 4556777763 26678888864 69999998653
No 147
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.95 E-value=1e-27 Score=240.57 Aligned_cols=297 Identities=14% Similarity=0.074 Sum_probs=199.3
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCC---------CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGH---------GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~---------G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
+.+.|..+.+. ++++.+.+++.+.+.+ ...|+... ...++|++++++++ ++++ +|++++|++
T Consensus 18 ~~~~Ld~~~~~-~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~-~v~~~~g~t 88 (432)
T 3a9z_A 18 RKVYMDYNATT-PLEPEVIQAVTEAMKE-AWGNPSSSYVAGRKAKDIINTARASLAKMIG------GKPQ-DIIFTSGGT 88 (432)
T ss_dssp CCEECBTTTCC-CCCHHHHHHHHHHHHH-CCSCTTCSSHHHHHHHHHHHHHHHHHHHHHT------CCGG-GEEEESCHH
T ss_pred CcEEeeCCccC-CCCHHHHHHHHHHHHH-hcCCCccCcHHHHHHHHHHHHHHHHHHHHcC------CCcC-eEEEeCChH
Confidence 67888888666 6678889999888765 33343321 12478888888775 4566 899999999
Q ss_pred HHHHHHHHHcc--------CCCCeEEEcCCCchhH-----------------HHHHHHcCCEEEEEEcCCCCCCCCHHHH
Q 013883 181 EAIAATILGLI--------NPGDEVILFAPFYDSY-----------------EATLSMAGAKIKCITLRPPDFAIPIEEL 235 (434)
Q Consensus 181 ~ai~~~~~~l~--------~~gd~Vlv~~p~y~~~-----------------~~~~~~~G~~~~~v~~~~~~~~~d~~~l 235 (434)
+++.+++.+++ ++||+|+++.|+|+.+ ....+..|++++.+|++++++.+|++.|
T Consensus 89 ~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l 168 (432)
T 3a9z_A 89 ESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDI 168 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHH
T ss_pred HHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHH
Confidence 99999999886 5899999999999764 3344557999999998764678999999
Q ss_pred HhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcC----------cEEEEcCcCCccccCCCCccccCCCCCCCc
Q 013883 236 KSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEND----------VLVFSDEVYDKLAFEMDHISIASLPGMYER 305 (434)
Q Consensus 236 ~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~----------~~iI~Deay~~~~~~~~~~~~~~~~~~~~~ 305 (434)
++++++++++|++++|+||||.+++.+ +|.++|++++ +++|+||+|..+. ....+..+ +.
T Consensus 169 ~~~i~~~~~~v~~~~~~nptG~~~~~~---~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~---~~~~~~~~----~~ 238 (432)
T 3a9z_A 169 LAAVRPTTCLVTIMLANNETGVIMPIS---EISRRIKALNQIRAASGLPRVLVHTDAAQALGK---RRVDVEDL----GV 238 (432)
T ss_dssp HHTCCTTEEEEECCSBCTTTCBBCCHH---HHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT---SCCCHHHH----CC
T ss_pred HHhccCCceEEEEECcccCcccccCHH---HHHHHHHhcCcccccccCCceEEEEEchhhhCC---cccChhhc----CC
Confidence 999998999999999999999999864 5888899998 9999999997632 11122111 12
Q ss_pred eEEEccCChhhccccceeeeEEeChhh-HHHHHHH-------hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 013883 306 TVTMNSLGKTFSLTGWKIGWAIAPPHL-TWGVRQA-------HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKK 377 (434)
Q Consensus 306 ~i~i~S~SK~~g~~G~R~G~~~~~~~~-~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 377 (434)
.+++.|++|.+| +|+||++++++. ...+... .....++.+.+.+.++.++|+..+++++++++++++++
T Consensus 239 d~~~~s~~K~~g---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~ 315 (432)
T 3a9z_A 239 DFLTIVGHKFYG---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIR 315 (432)
T ss_dssp SEEEEEGGGTTC---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEehhHhcC---CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 356899999775 569999998765 2222211 12234556777777777777754557788899999999
Q ss_pred HHHHHHhhhC-CCEee--cC-----CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 378 AILVEGLNAV-GFKVF--PS-----SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 378 ~~l~~~L~~~-g~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+++.+.|+++ |+.+. .+ ..+.++++.+...+. +..++.+.+ .||.+.+|..
T Consensus 316 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l---~~i~~~~G~~ 374 (432)
T 3a9z_A 316 DYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQL-RGYMVLAQC---QTLLASVGAS 374 (432)
T ss_dssp HHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTC-CHHHHHHHC---SSEECBSSCG
T ss_pred HHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCC-cHHHHHHHh---cCeEEecccc
Confidence 9999999884 65443 22 112233333332222 345555543 2677766643
No 148
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.95 E-value=3.9e-28 Score=243.82 Aligned_cols=309 Identities=12% Similarity=0.065 Sum_probs=206.1
Q ss_pred CeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..+||..+.+ .+. .++.+.+++.+++.+..+ +.. .+..+++.++++.+.+.++. +++ +|++++|+++++..+
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~-~~~~~~~~~l~~~la~~~~~--~~~-~v~~~~gg~ea~~~a 118 (433)
T 1zod_A 44 AILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDH-LFS-EMLSRPVVDLATRLANITPP--GLD-RALLLSTGAESNEAA 118 (433)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCC-CCT-TCCCHHHHHHHHHHHHHSCT--TCC-EEEEESCHHHHHHHH
T ss_pred EEEEcccchhccccCCCCHHHHHHHHHHHHhCcc-ccc-ccCCHHHHHHHHHHHHhCCC--CcC-EEEEeCchHHHHHHH
Confidence 4678866532 233 478899999998876432 222 23345667777777776664 356 899999999999999
Q ss_pred HHHcc--CCCCeEEEcCCCchhHHHHHHHc-C-----------CEEEEEEcCC---CCCC--------CCHHHHHhhccc
Q 013883 187 ILGLI--NPGDEVILFAPFYDSYEATLSMA-G-----------AKIKCITLRP---PDFA--------IPIEELKSTISK 241 (434)
Q Consensus 187 ~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G-----------~~~~~v~~~~---~~~~--------~d~~~l~~~i~~ 241 (434)
++.+. ..+|+|++.+|+|+++....... + ..+..++... ..++ +|++.+++++++
T Consensus 119 ~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 198 (433)
T 1zod_A 119 IRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDR 198 (433)
T ss_dssp HHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHh
Confidence 88653 34589999999998765443322 1 1334444321 0122 369999998873
Q ss_pred ----CCcEEEecCC-CCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChh
Q 013883 242 ----NTRAILMNTP-HNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKT 315 (434)
Q Consensus 242 ----~~~~i~~~~p-~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 315 (434)
++++|+ ++| +||||. +++.+++++|+++|++||+++|+||+|.+|.+.+....+.... ...+ +.||||.
T Consensus 199 ~~~~~~~~vi-~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~-~~~d---i~s~sK~ 273 (433)
T 1zod_A 199 QSSGNLAAFI-AEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDG-VTPD---ILTLSKT 273 (433)
T ss_dssp HCCSCEEEEE-ECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHT-CCCS---EEEECHH
T ss_pred cCCCCeEEEE-EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcC-CCCC---EEEeccc
Confidence 445555 456 688996 6788889999999999999999999999886554322222111 1112 4489999
Q ss_pred hccccceeeeEEeChhhHHHHHHHhhc--cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----C-
Q 013883 316 FSLTGWKIGWAIAPPHLTWGVRQAHSF--LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----G- 388 (434)
Q Consensus 316 ~g~~G~R~G~~~~~~~~~~~l~~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g- 388 (434)
+| .|+|+||+++++++++.+...... .+++.+.+++.++.++|+..++ +++.++++++++.+++.|+++ +
T Consensus 274 ~~-~G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~ 350 (433)
T 1zod_A 274 LG-AGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR--DGLVARANVMGDRLRRGLLDLMERFDC 350 (433)
T ss_dssp HH-TTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred cc-CCCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99 599999999999998888763322 5677889999888888864221 234556666666666666553 3
Q ss_pred CEeecCCeeEEEeeecCCCC------CCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 389 FKVFPSSGTYFVVVDHTPFG------HETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+...++.|. |+|+++.... ..+..+++++|++ +||.+.||..|
T Consensus 351 ~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~ 399 (433)
T 1zod_A 351 IGDVRGRGL-LLGVEIVKDRRTKEPADGLGAKITRECMN-LGLSMNIVQLP 399 (433)
T ss_dssp EEEEEEETT-EEEEEEEEETTTTEECTTHHHHHHHHHHH-TTEECCEECCT
T ss_pred eEEEEEEEE-EEEEEEecCccccCCChHHHHHHHHHHHH-CCCeEeccCCC
Confidence 334455555 4466653210 1135678888875 59999998754
No 149
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.95 E-value=3.2e-27 Score=239.15 Aligned_cols=313 Identities=13% Similarity=0.031 Sum_probs=214.4
Q ss_pred CCeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQG--FPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...+||..| ...+. .+|.+.+++.+++.+....|....+..++++++++++.+.++. +.+ +|++++|+++++..
T Consensus 50 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~~-~v~~~~ggseA~~~ 126 (459)
T 4a6r_A 50 NKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPA--GFD-RVFYTNSGSESVDT 126 (459)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCT--TCC-EEEEESSHHHHHHH
T ss_pred CEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCC--CCC-EEEEeCchHHHHHH
Confidence 357888776 22232 3688999999998875545665556668888899988887653 455 89999999999999
Q ss_pred HHHHccC--------CCCeEEEcCCCchhHHHHHHHcCC-------------EEEEEEcCC----CCCCCC--------H
Q 013883 186 TILGLIN--------PGDEVILFAPFYDSYEATLSMAGA-------------KIKCITLRP----PDFAIP--------I 232 (434)
Q Consensus 186 ~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~----~~~~~d--------~ 232 (434)
+++.+++ +++.|++.+|+|+++......++. .+..++... .++ .| +
T Consensus 127 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~ 205 (459)
T 4a6r_A 127 MIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAA 205 (459)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHH
Confidence 9998875 579999999999987765554432 233343221 112 45 7
Q ss_pred HHHHhhccc----CCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceE
Q 013883 233 EELKSTISK----NTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTV 307 (434)
Q Consensus 233 ~~l~~~i~~----~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i 307 (434)
+.|++++.. ++++|+++.++|++|. +++.+.+++|.++|++||+++|+||+|.+|.+.|.......+...++
T Consensus 206 ~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pd--- 282 (459)
T 4a6r_A 206 RWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPD--- 282 (459)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCS---
T ss_pred HHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCC---
Confidence 888888863 3455555444555666 55889999999999999999999999999876664332222222222
Q ss_pred EEccCChhhccccceeeeEEeChhhHHHHH---HHhhccccCCchHHHHHHHHHHhCC--hHHHHHHH-HHHHHHHHHHH
Q 013883 308 TMNSLGKTFSLTGWKIGWAIAPPHLTWGVR---QAHSFLTFATSTPMQWAATAALRAP--ETYYEELK-RDYSAKKAILV 381 (434)
Q Consensus 308 ~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~---~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~-~~~~~~~~~l~ 381 (434)
+.+|||.++..|+|+||+++++++++.+. ......+++.+++++.++.++|+.. ++++++.+ +..+..++.+.
T Consensus 283 -i~t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~ 361 (459)
T 4a6r_A 283 -LFTAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWR 361 (459)
T ss_dssp -EEEECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHH
T ss_pred -eeehhhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 44789999844499999999999998887 3334457889999999999999842 23445555 44455555555
Q ss_pred HHhhhCC-CEeecCCeeEEEeeecCCCCC---------CCHHHHHHHHHHhcCeEEECCC
Q 013883 382 EGLNAVG-FKVFPSSGTYFVVVDHTPFGH---------ETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 382 ~~L~~~g-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.|.+.+ +..+++.|.|+ ++.+..... ....++++.|+++ ||.+.|+.
T Consensus 362 ~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~g 419 (459)
T 4a6r_A 362 ETFSRFEHVDDVRGVGMVQ-AFTLVKNKAKRELFPDFGEIGTLCRDIFFRN-NLIMRACG 419 (459)
T ss_dssp HHHTTCTTEEEEEEETTEE-EEEECSBTTTTBCCSSTTHHHHHHHHHHHHT-TEECEEET
T ss_pred HHHhcCCCeEEEEEEEEEE-EEEEecCccccccccchHHHHHHHHHHHHHC-CeEEecCC
Confidence 5565553 45556666654 444432110 0145677888765 99999853
No 150
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.95 E-value=2.6e-27 Score=238.04 Aligned_cols=299 Identities=14% Similarity=0.128 Sum_probs=201.5
Q ss_pred CCeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQG--FPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..| ...++ .+|.+.+++.+++.+.. .|... ...+++.++++.+.+..| .+ +|++++|+++|+..
T Consensus 65 ~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~-~~~~~-~~~~~~~~l~~~la~~~g----~~-~v~~~~sGseA~~~ 137 (433)
T 1z7d_A 65 KRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLT-ICSRA-FFSVPLGICERYLTNLLG----YD-KVLMMNTGAEANET 137 (433)
T ss_dssp CEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCS-CCCTT-SEEHHHHHHHHHHHHHHT----CS-EEEEESSHHHHHHH
T ss_pred CEEEEcccchhhcccCCCCHHHHHHHHHHHHhCC-CccCC-cCCHHHHHHHHHHHhhcC----CC-eEEEeCCHHHHHHH
Confidence 357898876 44566 78999999999887632 22221 123445555555555544 45 89999999999999
Q ss_pred HHHHcc---------CCC-CeEEEcCCCchhHHH-HHHHcC------------CEEEEEEcCCCCCCCCHHHHHhhc-cc
Q 013883 186 TILGLI---------NPG-DEVILFAPFYDSYEA-TLSMAG------------AKIKCITLRPPDFAIPIEELKSTI-SK 241 (434)
Q Consensus 186 ~~~~l~---------~~g-d~Vlv~~p~y~~~~~-~~~~~G------------~~~~~v~~~~~~~~~d~~~l~~~i-~~ 241 (434)
+++.+. .+| |+|++.+|+|+++.. .+...| .++..+|+. |++.+++++ ++
T Consensus 138 al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~------d~~~le~~l~~~ 211 (433)
T 1z7d_A 138 AYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYD------DLEALEEELKDP 211 (433)
T ss_dssp HHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTT------CHHHHHHHHTST
T ss_pred HHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCC------CHHHHHHHhCCC
Confidence 988753 467 999999999988654 333333 234444432 899999999 46
Q ss_pred CCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc
Q 013883 242 NTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG 320 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 320 (434)
++++|+++..+|++|.+ ++.+.+++|.++|++||+++|+||+|.+|.+.+.......+...++ +.||||.+| +|
T Consensus 212 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~d----i~t~sK~l~-~G 286 (433)
T 1z7d_A 212 NVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPD----VILLGKALS-GG 286 (433)
T ss_dssp TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS----EEEECGGGG-TT
T ss_pred CEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCC----EEEECcccc-CC
Confidence 67777666557789975 6888999999999999999999999998765554322222211122 338999999 89
Q ss_pred -ceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--CCE---eecC
Q 013883 321 -WKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV--GFK---VFPS 394 (434)
Q Consensus 321 -~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~---~~~~ 394 (434)
+|+||+++++++++.+.......+++.+++.+.++.++|+..++ +++.++++++++++.+.|+++ ++. ..++
T Consensus 287 ~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~ 364 (433)
T 1z7d_A 287 HYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN--EKLCENAEKLGGPFLENLKRELKDSKIVRDVRG 364 (433)
T ss_dssp SSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEE
T ss_pred CCCeEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 99999999998877665443456788888988888888875321 245666777777787777664 442 2334
Q ss_pred CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 395 SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
.| .++++.+.... .+..+++++|+++ ||.+.|+
T Consensus 365 ~g-~~~~i~~~~~~-~~~~~~~~~l~~~-Gv~v~~~ 397 (433)
T 1z7d_A 365 KG-LLCAIEFKNEL-VNVLDICLKLKEN-GLITRDV 397 (433)
T ss_dssp ET-TEEEEEECTTT-CCHHHHHHHHHHT-TEECCEE
T ss_pred ee-eEEEEEEccCh-hHHHHHHHHHHHC-CeEEecC
Confidence 44 45667764321 2467899888765 9999884
No 151
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.95 E-value=2.7e-27 Score=239.21 Aligned_cols=311 Identities=12% Similarity=0.066 Sum_probs=209.8
Q ss_pred CCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..|. ..+. .+|.+.+++.+++.+..+ ....+..+++.++++++.+.++.. . +|++++|+++++..
T Consensus 49 ~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~--~~~~~~~~~~~~la~~l~~~~~~~---~-~v~~~~ggseA~~~ 122 (452)
T 3n5m_A 49 KRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY--FPMSQSHEPAIKLAEKLNEWLGGE---Y-VIFFSNSGSEANET 122 (452)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC--CCTTSEEHHHHHHHHHHHHHHTSC---E-EEEEESSHHHHHHH
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC--cccccCCHHHHHHHHHHHHhCCCC---c-eEEEeCchHHHHHH
Confidence 3578988772 2222 478899999998876433 233355677777888877766532 2 39999999999999
Q ss_pred HHHHcc-----C---CCCeEEEcCCCchhHHHHHHHcCCE-------------EEEEEcCCC-CCC-CC---------HH
Q 013883 186 TILGLI-----N---PGDEVILFAPFYDSYEATLSMAGAK-------------IKCITLRPP-DFA-IP---------IE 233 (434)
Q Consensus 186 ~~~~l~-----~---~gd~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~-~~~-~d---------~~ 233 (434)
+++.+. . ++|+|++.+|+|+++......++.. +..++.... ... -| ++
T Consensus 123 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (452)
T 3n5m_A 123 AFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVK 202 (452)
T ss_dssp HHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHH
Confidence 999887 5 7899999999999876655554332 334443210 000 12 89
Q ss_pred HHHhhcc----cCCcEEEecCC-CCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceE
Q 013883 234 ELKSTIS----KNTRAILMNTP-HNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTV 307 (434)
Q Consensus 234 ~l~~~i~----~~~~~i~~~~p-~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i 307 (434)
.|+++++ +++++|+++.+ +| ||.++ +.+.+++|.++|++||+++|+||+|.+|.+.|...........++
T Consensus 203 ~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~d--- 278 (452)
T 3n5m_A 203 EVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPD--- 278 (452)
T ss_dssp HHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCS---
T ss_pred HHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCC---
Confidence 9999987 46677777777 89 99766 888899999999999999999999999876654333332221122
Q ss_pred EEccCChhhcccc-ceeeeEEeChhhHHHHHH---Hh---hccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHH
Q 013883 308 TMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQ---AH---SFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKA 378 (434)
Q Consensus 308 ~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~---~~---~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~ 378 (434)
+.+|||.++ .| +|+||+++++++++.+.. .. ...+++.+++++.++.++|+.. ++.++++++..+..++
T Consensus 279 -i~t~sK~l~-~G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 356 (452)
T 3n5m_A 279 -IITMAKGIT-SAYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLE 356 (452)
T ss_dssp -EEEECGGGG-TTSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred -EEeeccccc-CCCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 447999999 59 999999999998877642 11 2357788999999999888742 2234444444444444
Q ss_pred HHHHHhhhCC-CEeecCCeeEEEeeecCCCCCC-------CHHHHHHHHHHhcCeEEECCCCC
Q 013883 379 ILVEGLNAVG-FKVFPSSGTYFVVVDHTPFGHE-------TDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 379 ~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
.+.+.+.+.+ +...++.|.|+. +.+...... ...++++.|+++ ||.+.|+..|
T Consensus 357 ~L~~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~ 417 (452)
T 3n5m_A 357 QLKEEIGEHPLVGDIRGKGLLVG-IELVNDKETKEPIDNDKIASVVNACKEK-GLIIGRNGMT 417 (452)
T ss_dssp HHHHHHTTCTTEEEEEESSSCEE-EEEEEETTTTEECCHHHHHHHHHHHHHT-TEECEECTTS
T ss_pred HHHHHHhcCCCeEEEEEEEEEEE-EEEecCCcccCCCCHHHHHHHHHHHHHC-CcEEeecCcc
Confidence 4544444443 445566666553 433211100 124677777765 9999998754
No 152
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.95 E-value=1.8e-26 Score=228.52 Aligned_cols=289 Identities=18% Similarity=0.179 Sum_probs=205.8
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYA-RGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATIL 188 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~ 188 (434)
++++|+.|.|.++ +.+.+++.+.+..+ .|. +..+..+||++++++++ .+ ++++++|+++++..++.
T Consensus 23 ~~~~l~~~~p~~~--~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~~--------~~-~~i~~~~gt~al~~~l~ 89 (391)
T 3dr4_A 23 DLPRISVAAPRLD--GNERDYVLECMDTT--WISSVGRFIVEFEKAFADYCG--------VK-HAIACNNGTTALHLALV 89 (391)
T ss_dssp -----CCCCCCCC--SSHHHHHHHHHHHT--CCSSCSHHHHHHHHHHHHHHT--------CS-EEEEESSHHHHHHHHHH
T ss_pred CCceeccCCCCCC--HHHHHHHHHHHHcC--CccCCChHHHHHHHHHHHHhC--------CC-cEEEeCCHHHHHHHHHH
Confidence 6788999988654 66777787777654 455 56688999999999987 33 67888888999999999
Q ss_pred Hc-cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHH
Q 013883 189 GL-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 189 ~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
++ +++||+|+++.|+|+.+...+...|++++.++.+++++.+|++.+++++++++++|+ |+||||...+ +++|
T Consensus 90 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~---~~~i 163 (391)
T 3dr4_A 90 AMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIM---PVHLYGQICD---MDPI 163 (391)
T ss_dssp HHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCC---HHHH
T ss_pred HcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCCCceEEE---EECCCCChhh---HHHH
Confidence 99 999999999999999999999999999999999876889999999999988888877 5789999874 6779
Q ss_pred HHHHHHcCcEEEEcCcCCccc-cCCCCccccCCCCCCCceEEEccCC--hhhccccceeeeEEeCh-hhHHHHHHHhhcc
Q 013883 268 ASLCIENDVLVFSDEVYDKLA-FEMDHISIASLPGMYERTVTMNSLG--KTFSLTGWKIGWAIAPP-HLTWGVRQAHSFL 343 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~-~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~~~~~~-~~~~~l~~~~~~~ 343 (434)
+++|+++|+++|+|++|.... +.+. ....+ .+ +.+.||+ |.++ |.+.|+++++. ++.+.++......
T Consensus 164 ~~l~~~~~~~li~D~a~~~g~~~~~~--~~~~~---~d--i~~~S~s~~K~l~--~g~gg~~~~~~~~~~~~~~~~~~~g 234 (391)
T 3dr4_A 164 LEVARRHNLLVIEDAAEAVGATYRGK--KSGSL---GD--CATFSFFGNAIIT--TGEGGMITTNDDDLAAKMRLLRGQG 234 (391)
T ss_dssp HHHHHHTTCEEEEECTTCTTCEETTE--ETTSS---SS--EEEEECBTTSSSC--CBSCEEEEESCHHHHHHHHHHHBTT
T ss_pred HHHHHHcCCEEEEECcccccceECCe--eeccc---CC--EEEEECCCCCcCC--cCCeEEEEECCHHHHHHHHHHHhcC
Confidence 999999999999999998633 2221 11111 12 6677777 6664 56789988864 5777776654322
Q ss_pred c--------------cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecC------CeeE-EEee
Q 013883 344 T--------------FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPS------SGTY-FVVV 402 (434)
Q Consensus 344 ~--------------~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~------~~~~-~~~~ 402 (434)
. +..+.....+....+. .+++..++.+++++.+.+.|++.|+.+..+ ..++ ++++
T Consensus 235 ~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i 310 (391)
T 3dr4_A 235 MDPNRRYWFPIVGFNYRMTNIQAAIGLAQLE----RVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTV 310 (391)
T ss_dssp CCTTSTTCCSSCCCBCBCCHHHHHHHHHHHH----THHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEE
T ss_pred CCCCCcccccccccccCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEE
Confidence 1 2223333322222232 345566777778888888888878776544 2232 2344
Q ss_pred ecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 403 DHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 403 ~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
.+......+..++.++|.++ ||.+.+|.
T Consensus 311 ~~~~~~~~~~~~l~~~L~~~-GI~v~~~~ 338 (391)
T 3dr4_A 311 RLGEGLSTTRDQVIKDLDAL-GIESRPVF 338 (391)
T ss_dssp EECSSCSSCHHHHHHHHHHT-TCCCEECC
T ss_pred EECCccchhHHHHHHHHHHC-CCceeecC
Confidence 44321112477888888665 99999884
No 153
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-26 Score=237.66 Aligned_cols=297 Identities=13% Similarity=0.085 Sum_probs=221.9
Q ss_pred CCcHHHHHHHHHHHHc----CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccC-----
Q 013883 122 DGPDFVKDAAIQAIRD----GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLIN----- 192 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~----- 192 (434)
.+++.+.+.+.+++.. ....|....|..++++.+++++.+.+|.+.+++ ++++++|+++++.+++.++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~-~~~~~~ggt~a~~~a~~a~~~~~~~~ 153 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTG-CGTTTSGGTESLLLACLSAKMYALHH 153 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTC-CEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCC-eEEEcCcHHHHHHHHHHHHHHHHHhc
Confidence 4457788888888765 334455556778999999999999999876666 899999999999999998865
Q ss_pred CC---CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHH
Q 013883 193 PG---DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 193 ~g---d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
+| |+|+++.|+|..+...+...|++++.||++++++.+|++.|++++++++++|++++|+||||.+.+ +++|++
T Consensus 154 ~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~ 230 (497)
T 3mc6_A 154 RGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK 230 (497)
T ss_dssp SCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred CCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence 56 899999999999999999999999999998657889999999999999999999999999999975 667999
Q ss_pred HHHHcCcEEEEcCcCCccccC-----C-CCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhcc
Q 013883 270 LCIENDVLVFSDEVYDKLAFE-----M-DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 343 (434)
Q Consensus 270 la~~~~~~iI~Deay~~~~~~-----~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~ 343 (434)
+|++||+++|+|++|.++... + ...+...+ ...+..+++.|++|.++ +|.++||++++.+.+..........
T Consensus 231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~-~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~ 308 (497)
T 3mc6_A 231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDF-RVPGVTSISCDTHKYGF-APKGSSVIMYRNSDLRMHQYYVNPA 308 (497)
T ss_dssp HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCST-TSTTCCEEEEETTTTTC-CCSSCEEEECSSHHHHTTTSCCBTT
T ss_pred HHHHhCCEEEEECcchhhhhhhhhhhcccCCccccc-cCCCCcEEEECchhhcC-CCCCceeEEecCHHHHhhhhccccc
Confidence 999999999999999865432 1 00100111 12234678889999875 7888999999876554321111000
Q ss_pred ----cc-------CCc---hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC--CCEee-cCCeeEEEeeecCC
Q 013883 344 ----TF-------ATS---TPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV--GFKVF-PSSGTYFVVVDHTP 406 (434)
Q Consensus 344 ----~~-------~~~---~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~-~~~~~~~~~~~~~~ 406 (434)
.+ +.+ ..++.++...|. .+.+++..+++.++++++.+.|++. |+.+. ++.++++.|. ..
T Consensus 309 ~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~-~~- 384 (497)
T 3mc6_A 309 WTGGLYGSPTLAGSRPGAIVVGCWATMVNMG--ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFS-SK- 384 (497)
T ss_dssp CTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEE-CT-
T ss_pred ccCCCcCCcCcccCCcchhHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEe-CC-
Confidence 00 001 233555555554 3456778888999999999999984 88887 4566666553 22
Q ss_pred CCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 407 FGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 407 ~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+ .+..++.++|.++ ||.+.++.
T Consensus 385 -~-~~~~~l~~~L~~~-Gi~v~~~~ 406 (497)
T 3mc6_A 385 -T-LNIHELSDRLSKK-GWHFNALQ 406 (497)
T ss_dssp -T-TTHHHHHHHHHTT-TCBCEECC
T ss_pred -C-CCHHHHHHHHHhC-CEEEecCC
Confidence 2 2577888888765 99988764
No 154
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.95 E-value=1.8e-27 Score=239.22 Aligned_cols=307 Identities=19% Similarity=0.115 Sum_probs=195.7
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...+||..|.. .+. .+|.+.+++.+++.+....+.+.....+|+++++++ ++ +++ +|++++|+++++..
T Consensus 55 ~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~----~~---~~~-~v~~~~sGsea~~~ 126 (434)
T 3l44_A 55 NKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEA----MP---ALD-KVRFVNSGTEAVMT 126 (434)
T ss_dssp CEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHH----CT---TCS-EEEEESSHHHHHHH
T ss_pred CEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHh----CC---CCC-EEEEeCchHHHHHH
Confidence 35789887742 233 478999999998876432222222334555555554 33 356 89999999999999
Q ss_pred HHHHccC--CCCeEEEcCCCchhHHHHHHHcCC-EEEEEEcCCCCCC-------------CCHHHHHhhccc---CCcEE
Q 013883 186 TILGLIN--PGDEVILFAPFYDSYEATLSMAGA-KIKCITLRPPDFA-------------IPIEELKSTISK---NTRAI 246 (434)
Q Consensus 186 ~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~-~~~~v~~~~~~~~-------------~d~~~l~~~i~~---~~~~i 246 (434)
+++.+.. ++++|++.+|+|+++...+...+. ....+......+. -|++.+++++++ ++++|
T Consensus 127 ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~v 206 (434)
T 3l44_A 127 TIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAI 206 (434)
T ss_dssp HHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEE
T ss_pred HHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEE
Confidence 9987764 779999999999886544333222 1111111100011 189999998873 45555
Q ss_pred EecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeee
Q 013883 247 LMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGW 325 (434)
Q Consensus 247 ~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~ 325 (434)
+++.++|++|.+. +.+.+++|.++|++||+++|+||+|.+| ..+.......+...++ +.||||.+| +|+|+||
T Consensus 207 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~d----i~t~sK~~~-~G~~iG~ 280 (434)
T 3l44_A 207 LVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPD----LTALGKVIG-GGLPIGA 280 (434)
T ss_dssp EECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCS----EEEEEGGGG-TTSSCEE
T ss_pred EEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCC----eeehhhhhc-CCcCeee
Confidence 5555566666655 8888999999999999999999999998 5543322222221122 558999999 8999999
Q ss_pred EEeChhhHHHHHHH---hhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCC-EeecCCeeEE
Q 013883 326 AIAPPHLTWGVRQA---HSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGF-KVFPSSGTYF 399 (434)
Q Consensus 326 ~~~~~~~~~~l~~~---~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~ 399 (434)
+++++++++.+... ....+++.+++++.++.++|+.. ++++++.++..+..++.|.+.+.+.++ ...++.|.|+
T Consensus 281 ~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~ 360 (434)
T 3l44_A 281 YGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGAL 360 (434)
T ss_dssp EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEE
T ss_pred EEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEE
Confidence 99999998776542 23347888999999998888732 334444444444444444444444454 3344455544
Q ss_pred EeeecCCCCCC-----------CHHHHHHHHHHhcCeEEECCC
Q 013883 400 VVVDHTPFGHE-----------TDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 400 ~~~~~~~~~~~-----------~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
++.+...... ...++++.|+++ ||.+.||.
T Consensus 361 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~ 401 (434)
T 3l44_A 361 -TVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQE-GVNLAPSK 401 (434)
T ss_dssp -EEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHT-TEECCSST
T ss_pred -EEEEecCcccchhhccccCHHHHHHHHHHHHHC-CeEEeecC
Confidence 4443221111 125677777765 99999975
No 155
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.95 E-value=6.3e-27 Score=238.39 Aligned_cols=305 Identities=15% Similarity=0.114 Sum_probs=217.1
Q ss_pred CCeeEeCCCCCCCCCcHHHHHHHHHHHHcCCC-C------CCCCCCcHHHHHHHHHHHHhhcCCCCCC--CCcEEEcCCh
Q 013883 109 HGAINLGQGFPNFDGPDFVKDAAIQAIRDGKN-Q------YARGHGVPEFNSAIASRFKKDSGLEVDP--EKEVTVTSGC 179 (434)
Q Consensus 109 ~~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~-~------Y~~~~G~~~lr~~ia~~l~~~~g~~~~~--~~~i~~t~G~ 179 (434)
.+.|+|..+.+ +.++.+.+++.+.+.+... + |....+..++++.+.+++.+.+|.+.+. . +|++++|+
T Consensus 44 ~~~i~L~a~e~--~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~-~V~~~sGs 120 (483)
T 1rv3_A 44 RVGLELIASEN--FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGV-NVQPYSGS 120 (483)
T ss_dssp HSSEECCTTCC--CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEE-ECCCSSHH
T ss_pred hcCeEEEcCCC--CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCce-EEEECCcH
Confidence 36799977754 3578888888777765321 2 3333345678888888998888875322 2 48888887
Q ss_pred HHHHHHHHHHccCCCCeEEEcCCCchhHHH--------HHHHcC--CEEEEEEcCCCCCCCCHHHHHhhcc-cCCcEEEe
Q 013883 180 TEAIAATILGLINPGDEVILFAPFYDSYEA--------TLSMAG--AKIKCITLRPPDFAIPIEELKSTIS-KNTRAILM 248 (434)
Q Consensus 180 ~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~G--~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~i~~ 248 (434)
+++.+++.++++|||+|++++|.|.++.. .+...| .+++.++++++++.+|+|.|+++++ .++|+|++
T Consensus 121 -~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~ 199 (483)
T 1rv3_A 121 -PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA 199 (483)
T ss_dssp -HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE
T ss_pred -HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE
Confidence 88888899999999999999999887653 223344 4555555565678899999999998 79999999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCC-ccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEE
Q 013883 249 NTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYD-KLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAI 327 (434)
Q Consensus 249 ~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~-~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~ 327 (434)
+++||+ .+.+ +++|.++|+++|+++|+|++|. ++.+.+..... +. ...+++.|++|.+ .|+|.||++
T Consensus 200 -~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p--~~---~~div~~s~~K~l--~GprgG~i~ 267 (483)
T 1rv3_A 200 -GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSP--FE---HCHVVTTTTHKTL--RGCRAGMIF 267 (483)
T ss_dssp -CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCG--GG---TCSEEEEESSGGG--CCCSCEEEE
T ss_pred -eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCC--CC---CCcEEEecCcccC--CCCCceEEE
Confidence 899998 7775 7789999999999999999986 44333322111 11 2347889999987 589999999
Q ss_pred eChh---------------hHHHHHHHhhcc-ccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCE
Q 013883 328 APPH---------------LTWGVRQAHSFL-TFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFK 390 (434)
Q Consensus 328 ~~~~---------------~~~~l~~~~~~~-~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 390 (434)
++++ +...+....... ..+++.....++..+++.. ..++++.+++++++++.+.+.|++.|++
T Consensus 268 ~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 347 (483)
T 1rv3_A 268 YRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYK 347 (483)
T ss_dssp EECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred EcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhcCCE
Confidence 9875 333343322111 2233344444555556542 3467888999999999999999999999
Q ss_pred eecCC-eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE----CCC
Q 013883 391 VFPSS-GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI----PTS 431 (434)
Q Consensus 391 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~----pG~ 431 (434)
+..+. .++++|+++...+. +..++.+. +++.||.+. ||.
T Consensus 348 ~~~~~~~~~~~~v~~~~~g~-~~~~~~~~-L~~~gI~v~~~~~pg~ 391 (483)
T 1rv3_A 348 IVTGGSDNHLILVDLRSKGT-DGGRAEKV-LEACSIACNKNTCPGD 391 (483)
T ss_dssp EGGGSCSSSEEEEEGGGGTC-CHHHHHHH-HHHTTEECEEECCSSC
T ss_pred eccCCCCCceEEEeccCCCC-CHHHHHHH-HHhCCcEEecCCCCCC
Confidence 87653 45678888765444 45566554 467899999 986
No 156
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.95 E-value=1.2e-27 Score=242.01 Aligned_cols=293 Identities=16% Similarity=0.174 Sum_probs=207.7
Q ss_pred CeeEeCCC-CCCCCCcHHHHHHHHHH----HHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 110 GAINLGQG-FPNFDGPDFVKDAAIQA----IRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 110 ~~i~l~~g-~p~~~~~~~v~~~~~~~----~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+.|+|+.| .|+++.++.+.++.... ...+.+.|. ..|.+ +++++++++.+.+|. + ++++++|+++++.
T Consensus 90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~----~-~~i~~~sGt~al~ 162 (464)
T 1ibj_A 90 LLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA----D-RAFCFTSGMAALS 162 (464)
T ss_dssp HHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC----S-EEEEESSHHHHHH
T ss_pred eEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC----C-eEEEECCHHHHHH
Confidence 57889887 78887777776655432 223346677 45665 788888888887774 3 5666677788998
Q ss_pred HHHHHccCCCCeEEEcCCCchhHHHH----HHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCC
Q 013883 185 ATILGLINPGDEVILFAPFYDSYEAT----LSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFT 260 (434)
Q Consensus 185 ~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~ 260 (434)
+++. ++++||+|++++|.|+.+... ++..|++++.++.+ |++.+++++++++++|++++|+||||.+++
T Consensus 163 ~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~------d~~~l~~~i~~~tk~v~l~~p~NptG~v~~ 235 (464)
T 1ibj_A 163 AVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT------KLDEVAAAIGPQTKLVWLESPTNPRQQISD 235 (464)
T ss_dssp HHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT------SHHHHHHHCCSSEEEEEECSSCTTTCCCCC
T ss_pred HHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC------CHHHHHHHhccCceEEEEeCCCCCCCEeec
Confidence 8775 889999999999999998764 45689999998865 799999999989999999999999999995
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcc-ccceeeeEEeCh-hhHHHHHH
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSL-TGWKIGWAIAPP-HLTWGVRQ 338 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~G~R~G~~~~~~-~~~~~l~~ 338 (434)
+++|+++|++||+++|+||+|..... ...+ . .+.++++.|+||.++. .|+|+||+++++ ++++.+..
T Consensus 236 ---l~~i~~la~~~gi~livDea~~~g~~---~~~~-~----~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~ 304 (464)
T 1ibj_A 236 ---IRKISEMAHAQGALVLVDNSIMSPVL---SRPL-E----LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF 304 (464)
T ss_dssp ---HHHHHHHHHTTTCEEEEECTTTCTTT---CCGG-G----TTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHH
T ss_pred ---HHHHHHHHHHcCCEEEEECCCccccc---CChh-h----cCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHH
Confidence 77899999999999999999975321 1111 1 2567999999999863 488999999985 78888877
Q ss_pred HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH----------HhhhC-CCEeecCC----eeEEEeee
Q 013883 339 AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVE----------GLNAV-GFKVFPSS----GTYFVVVD 403 (434)
Q Consensus 339 ~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~----------~L~~~-g~~~~~~~----~~~~~~~~ 403 (434)
.......+.+.+.++++..+|+.....++...+......+++.+ .|+++ ++.+.+++ ++ +++++
T Consensus 305 ~~~~~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~-~~~~~ 383 (464)
T 1ibj_A 305 LQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGS-VFSFI 383 (464)
T ss_dssp HHHHTTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCS-EEEEE
T ss_pred HHHhcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCce-EEEEE
Confidence 76555667788888888888876433333332322323333322 23322 44444443 34 45555
Q ss_pred cCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 404 HTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 404 ~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+. +.+....++++| +..||.+.+|.
T Consensus 384 l~--~~~~~~~~~~~L-~~~gi~v~~G~ 408 (464)
T 1ibj_A 384 TG--SVALSKHLVETT-KYFSIAVSFGS 408 (464)
T ss_dssp CS--CHHHHHHHHHHC-SSSEECSCCCS
T ss_pred EC--CHHHHHHHHHhc-CcceEeecCCC
Confidence 52 211123466655 34699988885
No 157
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.95 E-value=1e-26 Score=238.79 Aligned_cols=290 Identities=14% Similarity=0.095 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHH----cCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcE--EEcCChHHHHHHHHHHccCCC----
Q 013883 125 DFVKDAAIQAIR----DGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEV--TVTSGCTEAIAATILGLINPG---- 194 (434)
Q Consensus 125 ~~v~~~~~~~~~----~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i--~~t~G~~~ai~~~~~~l~~~g---- 194 (434)
+.+.+.+.+++. .....|....+..++++++++++.+.+|.+.+++ ++ ++++|+++++..+++++.++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~-~v~~~~t~ggt~a~~~al~a~~~~g~~~~ 188 (514)
T 3mad_A 110 EHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGG-TVCGTVTSGGTESLLLAMKTYRDWARATK 188 (514)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTS-CCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccC-CcceEEcCcHHHHHHHHHHHHHHHhhhhc
Confidence 344444444443 2333444444667888999999998888766556 67 999999999999999998776
Q ss_pred ----CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHH
Q 013883 195 ----DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASL 270 (434)
Q Consensus 195 ----d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~l 270 (434)
|+|+++.|+|..+...+...|++++.+|+++ ++.+|++.|++++++++++|++++|+||||.+.+ +++|.++
T Consensus 189 g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l 264 (514)
T 3mad_A 189 GITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDA-DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAAL 264 (514)
T ss_dssp CCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCT-TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHH
T ss_pred CCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCC-CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHH
Confidence 9999999999999999999999999999986 7889999999999999999999999999999986 6779999
Q ss_pred HHHcCcEEEEcCcCCccccC-----CC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhh---
Q 013883 271 CIENDVLVFSDEVYDKLAFE-----MD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS--- 341 (434)
Q Consensus 271 a~~~~~~iI~Deay~~~~~~-----~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~--- 341 (434)
|++||+++|+||+|.++.+. +. ...+. . ...+..+++.|++|.++ +|.++|+++++.+..........
T Consensus 265 a~~~~i~livDea~~~~~~~~~~~~g~~~~~~~-~-~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~ 341 (514)
T 3mad_A 265 AAEHGIGCHVDACLGGFILPWAERLGYPVPPFD-F-RLEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADW 341 (514)
T ss_dssp HHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS-T-TSTTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSC
T ss_pred HHHhCCeEEEecccccccchhHHhcCCCCCccc-c-cCCCCcEEEECchhccC-CCCCeEEEEEeCHHHhcccccccccc
Confidence 99999999999999987642 11 01111 1 12345688899999865 77899999998765433211000
Q ss_pred -------c-cccCCchH---HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecCCeeEEEeeecCCCCC
Q 013883 342 -------F-LTFATSTP---MQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGH 409 (434)
Q Consensus 342 -------~-~~~~~~~~---~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 409 (434)
. ...+.+.. .+.++...+. .+++++..+++.++++++.+.|+++ |+.+..+..+ ++++... +
T Consensus 342 ~~~~~~~~~~~gs~~~~~~~a~~aal~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~--~- 415 (514)
T 3mad_A 342 PGGLYFSPTFAGSRPGALSATAWAAMLSLG--EEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASD--E- 415 (514)
T ss_dssp TTCSEEESSSCSSCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECS--S-
T ss_pred CCCcccCCccCCCCchHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCC--C-
Confidence 0 01122222 3333333343 4567888899999999999999987 8888776655 4455432 2
Q ss_pred CCHHHHHHHHHHhcCeEEECC
Q 013883 410 ETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 410 ~~~~~~~~~Ll~~~GV~v~pG 430 (434)
.+..++.++|.++ ||.+ +|
T Consensus 416 ~~~~~l~~~L~~~-Gi~v-~g 434 (514)
T 3mad_A 416 LNIYQVMEEMAGR-GWRL-NG 434 (514)
T ss_dssp SCHHHHHHHHHTT-TCBC-EE
T ss_pred CCHHHHHHHHHhc-CCEe-cc
Confidence 2577888888765 9987 44
No 158
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.95 E-value=6.4e-27 Score=236.43 Aligned_cols=315 Identities=15% Similarity=0.107 Sum_probs=210.4
Q ss_pred CCeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQG--FPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..| ...+. .+|.+.+++.+++.+. ..|....+..+++.++++.+.+..+.. ..+ +|++++|+++|+..
T Consensus 61 ~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~-~v~~~~sGseA~~~ 137 (451)
T 3oks_A 61 NRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDF-THTCFMVTPYEGYVAVCEQLNRLTPVR-GDK-RSALFNSGSEAVEN 137 (451)
T ss_dssp CEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTC-SCCTTTTSCCHHHHHHHHHHHHHSSCC-SSE-EEEEESSHHHHHHH
T ss_pred CEEEEcCCCccccccCCCCHHHHHHHHHHHHhc-ccccCCccCCHHHHHHHHHHHHhCCcC-CCC-EEEEeCcHHHHHHH
Confidence 357888876 22333 3788999999988764 346555566788888999888776532 235 79999999999999
Q ss_pred HHHHccC--CCCeEEEcCCCchhHHHHHHHcCC--------------EEEEEEcCCC--C--CCC--------CHHHHHh
Q 013883 186 TILGLIN--PGDEVILFAPFYDSYEATLSMAGA--------------KIKCITLRPP--D--FAI--------PIEELKS 237 (434)
Q Consensus 186 ~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~--------------~~~~v~~~~~--~--~~~--------d~~~l~~ 237 (434)
+++.+.. .++.|++.+++|+++......++. .+..+|+... + .+. +++.+++
T Consensus 138 Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 217 (451)
T 3oks_A 138 AVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAIT 217 (451)
T ss_dssp HHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHH
Confidence 9987653 458999999999987666554422 3455555410 0 011 2444444
Q ss_pred hc----ccCCcEEEecCCCCCcc-c-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEcc
Q 013883 238 TI----SKNTRAILMNTPHNPTG-K-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNS 311 (434)
Q Consensus 238 ~i----~~~~~~i~~~~p~NPTG-~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S 311 (434)
.+ ..+..+++++.|.|++| . .++.+.+++|.++|++||+++|+||+|.+|.+.+.......+...++ +.|
T Consensus 218 ~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~t 293 (451)
T 3oks_A 218 VIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPD----LIV 293 (451)
T ss_dssp HHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS----EEE
T ss_pred HHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCC----eee
Confidence 44 33555666667766665 3 45677799999999999999999999999876655433333322222 348
Q ss_pred CChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCC-
Q 013883 312 LGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVG- 388 (434)
Q Consensus 312 ~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g- 388 (434)
|||.++ .|+|+||+++++++++.+.......+++.+++++.++.++|+.. ++++++.++..+..++.+.+.+.+.+
T Consensus 294 ~sK~l~-~G~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 372 (451)
T 3oks_A 294 TAKGIA-GGLPLSAVTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDR 372 (451)
T ss_dssp ECGGGG-TTSSCEEEEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ehhhhh-CCcceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 999999 59999999999999887766566678899999999999988742 22344444444444455555444443
Q ss_pred CEeecCCeeEEEeeecCCC-----CCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 389 FKVFPSSGTYFVVVDHTPF-----GHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+...++.|. ++++.+... ......++++.|+++ ||.+.|+..|
T Consensus 373 ~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~ 420 (451)
T 3oks_A 373 IGDVRGRGA-MIAMELVKAGTTEPDADLTKALCAGAHAA-GVIVLSCGTY 420 (451)
T ss_dssp EEEEEEETT-EEEEEEBSTTSCCBCHHHHHHHHHHHHHT-TEECEEECTT
T ss_pred eEEEEEeeE-EEEEEEecCccCCCCHHHHHHHHHHHHhC-CcEEecCCCC
Confidence 344444455 445554220 111245677777765 9999997653
No 159
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.95 E-value=6.4e-27 Score=234.63 Aligned_cols=303 Identities=16% Similarity=0.117 Sum_probs=203.4
Q ss_pred CCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..|.+. +. .+|.+.+++.+++.+.. .|.. ..+++.++++++.+.++ +++ +|++++|+++++..
T Consensus 52 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~---~~~~~~~la~~l~~~~~---~~~-~v~~~~ggsea~~~ 123 (427)
T 3fq8_A 52 NRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT-SFGA---PCALENVLAEMVNDAVP---SIE-MVRFVNSGTEACMA 123 (427)
T ss_dssp CEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS-CCSS---CCHHHHHHHHHHHHHST---TCS-EEEEESSHHHHHHH
T ss_pred CEEEECCCchhhhccCCCCHHHHHHHHHHHHhCC-CcCC---CCHHHHHHHHHHHHhCC---CCC-EEEEeCCHHHHHHH
Confidence 357899887532 33 48899999999887643 2332 24677778888877765 356 89999999999999
Q ss_pred HHHHcc--CCCCeEEEcCCCchhHHHHHHHc-C-------------------CEEEEEEcCCCCCCCCHHHHHhhccc--
Q 013883 186 TILGLI--NPGDEVILFAPFYDSYEATLSMA-G-------------------AKIKCITLRPPDFAIPIEELKSTISK-- 241 (434)
Q Consensus 186 ~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G-------------------~~~~~v~~~~~~~~~d~~~l~~~i~~-- 241 (434)
+++... ..+++|++.+|+|+++...+... | ..+..+|++ |++.+++++++
T Consensus 124 al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~ 197 (427)
T 3fq8_A 124 VLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN------DLEAVKALFAENP 197 (427)
T ss_dssp HHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT------CHHHHHHHHHHST
T ss_pred HHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC------CHHHHHHHHHhCC
Confidence 985432 34578999999998643322111 1 123444433 79999999876
Q ss_pred -CCcEEEecCCCCCcccCCC-HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccc
Q 013883 242 -NTRAILMNTPHNPTGKMFT-REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG~~~~-~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
++++|+++.++|++|.+.+ .+.+++|.++|++||+++|+||+|.+| +.+...........++ +.||||.++ +
T Consensus 198 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~d----i~t~sK~~~-~ 271 (427)
T 3fq8_A 198 GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGVTPD----LTTLGKIIG-G 271 (427)
T ss_dssp TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTCCCS----EEEECGGGG-T
T ss_pred CCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCCCCC----hhhhhhhhh-C
Confidence 5667777767778887665 555999999999999999999999988 5543322222211122 568999999 8
Q ss_pred cceeeeEEeChhhHHHHHHHh---hccccCCchHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecC
Q 013883 320 GWKIGWAIAPPHLTWGVRQAH---SFLTFATSTPMQWAATAALRA--PETYYEELKRDYSAKKAILVEGLNAVGFKVFPS 394 (434)
Q Consensus 320 G~R~G~~~~~~~~~~~l~~~~---~~~~~~~~~~~q~a~~~~L~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 394 (434)
|+|+||+++++++++.+.... ...+++.+.+++.++.++|+. .+++.++.++..+..++.+.+.+.+.++....+
T Consensus 272 G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 351 (427)
T 3fq8_A 272 GLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGG 351 (427)
T ss_dssp TSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred CcceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 999999999999987765432 234667788999888888863 233444444444444445544444455544444
Q ss_pred CeeEEEeeecCCCCCC-----------CHHHHHHHHHHhcCeEEECCCC
Q 013883 395 SGTYFVVVDHTPFGHE-----------TDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 395 ~~~~~~~~~~~~~~~~-----------~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
..++++++.+...... ...+++++|+++ ||.+.|+..
T Consensus 352 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gi~v~~~~~ 399 (427)
T 3fq8_A 352 QVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQ-GIYLAPSQF 399 (427)
T ss_dssp EETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSSTT
T ss_pred EeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHC-CcEEecCCC
Confidence 4555667766432211 134677788765 999999863
No 160
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.95 E-value=4.9e-27 Score=237.11 Aligned_cols=310 Identities=13% Similarity=0.063 Sum_probs=201.6
Q ss_pred CCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..|. ..+. .+|.+.+++.+++.+.. .|....+..+.+.++++++.+..+. +.+ +|++++|+++|+..
T Consensus 44 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~~--~~~-~v~~~~sGseA~~~ 119 (448)
T 3dod_A 44 KEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIA-HSTLLGMTNVPATQLAETLIDISPK--KLT-RVFYSDSGAEAMEI 119 (448)
T ss_dssp CEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCS-CCCCSSSEEHHHHHHHHHHHHHSCT--TEE-EEEEESSHHHHHHH
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhcc-CccccccCCHHHHHHHHHHHHhCCC--CCC-EEEEeCchHHHHHH
Confidence 3578887762 2222 37889999999887642 3444456668888899988877653 345 89999999999999
Q ss_pred HHHHccC----CC----CeEEEcCCCchhHHHHHHHcCC-------------EEEEEEcCCCCCCC-----------CHH
Q 013883 186 TILGLIN----PG----DEVILFAPFYDSYEATLSMAGA-------------KIKCITLRPPDFAI-----------PIE 233 (434)
Q Consensus 186 ~~~~l~~----~g----d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~-----------d~~ 233 (434)
+++.+.. +| |+|++.+|+|+++......++. .+..++... .+.. |++
T Consensus 120 al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~ 198 (448)
T 3dod_A 120 ALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPY-VYRSESGDPDECRDQCLR 198 (448)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCC-CTTSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCc-cccCCccchhhhhHHHHH
Confidence 9998865 44 9999999999987655443332 123333321 2222 488
Q ss_pred HHHhhcc---cCCcEEEecCCC-CCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEE
Q 013883 234 ELKSTIS---KNTRAILMNTPH-NPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVT 308 (434)
Q Consensus 234 ~l~~~i~---~~~~~i~~~~p~-NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~ 308 (434)
.|+++++ +++++|+++.++ |++|. +++.+.+++|.++|++||+++|+||+|.+|.+.+.......+...++
T Consensus 199 ~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~d---- 274 (448)
T 3dod_A 199 ELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPD---- 274 (448)
T ss_dssp HHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS----
T ss_pred HHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCC----
Confidence 8999886 345566666556 88885 56788899999999999999999999999876654433332222222
Q ss_pred EccCChhhccccc-eeeeEEeChhhHHHHHH-------HhhccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHH
Q 013883 309 MNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQ-------AHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKA 378 (434)
Q Consensus 309 i~S~SK~~g~~G~-R~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~ 378 (434)
+.+|||.++ .|+ |+||+++++++++.+.. .....+++.+++++.++.++|+.. +++++++++..+..++
T Consensus 275 i~t~sK~l~-~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~ 353 (448)
T 3dod_A 275 LMAAGKGIT-GGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHF 353 (448)
T ss_dssp EEEECGGGG-TTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred EEEeccccc-CCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 447899998 695 99999999999887765 334457888999999999988742 2344555555555555
Q ss_pred HHHHHhhhCCC-EeecCCeeEEEeeecCCCCCC---------CHHHHHHHHHHhcCeEEECCC
Q 013883 379 ILVEGLNAVGF-KVFPSSGTYFVVVDHTPFGHE---------TDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 379 ~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
.+.+ +.+.+. ....+.|. ++|+.+...... ...++++.|+++ ||.+.|+.
T Consensus 354 ~l~~-l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~ 413 (448)
T 3dod_A 354 LLQD-LHALPHVGDIRQLGF-MCGAELVRSKETKEPYPADRRIGYKVSLKMREL-GMLTRPLG 413 (448)
T ss_dssp HHHH-HTTSTTEEEEEEETT-EEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECCEET
T ss_pred HHHH-HhcCCCeEEEEeeeE-EEEEEEccCcccccccchhhHHHHHHHHHHHHC-CcEEeccC
Confidence 5655 555443 33334444 556655331100 036788888765 99999864
No 161
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.95 E-value=3.4e-27 Score=236.82 Aligned_cols=304 Identities=16% Similarity=0.138 Sum_probs=200.9
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...+||..|.. .+. .+|.+.+++.+++.+....|.+.....+|++++++++. +++ +|++++|+++++..
T Consensus 53 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-------~~~-~v~~~~~Gsea~~~ 124 (429)
T 3k28_A 53 NEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVP-------SIE-IVRMVNSGTEATMS 124 (429)
T ss_dssp CEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHST-------TCS-EEEEESSHHHHHHH
T ss_pred CEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhCC-------CCC-EEEEeCChHHHHHH
Confidence 36799987742 333 47899999999887754333333344566666666542 255 89999999999999
Q ss_pred HHHHccC--CCCeEEEcCCCchhHHHHHHH-cCCEEEEEEcCCCCCC-------------CCHHHHHhhccc---CCcEE
Q 013883 186 TILGLIN--PGDEVILFAPFYDSYEATLSM-AGAKIKCITLRPPDFA-------------IPIEELKSTISK---NTRAI 246 (434)
Q Consensus 186 ~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~-~G~~~~~v~~~~~~~~-------------~d~~~l~~~i~~---~~~~i 246 (434)
+++.+.. +++.|++.+|+|+++...... .|..+..++.....+. -|++.++++++. ++++|
T Consensus 125 ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~v 204 (429)
T 3k28_A 125 ALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACV 204 (429)
T ss_dssp HHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEE
T ss_pred HHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEE
Confidence 9987754 678999999999865433221 2221111111110110 178999998873 45556
Q ss_pred EecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeee
Q 013883 247 LMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGW 325 (434)
Q Consensus 247 ~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~ 325 (434)
+++.++|++|.+. +.+.+++|.++|++||+++|+||+|.+| +.+.......+...++ +.+|||.+| .|+|+||
T Consensus 205 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~d----i~t~sK~~~-~G~~iG~ 278 (429)
T 3k28_A 205 IVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPD----LTCLGKVIG-GGLPVGA 278 (429)
T ss_dssp EECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCS----EEEECGGGG-TTSCCEE
T ss_pred EEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCc----eehhhhhhc-CCCCeEE
Confidence 6655566666655 6778999999999999999999999988 5543322222211112 457999998 6999999
Q ss_pred EEeChhhHHHHHHHh---hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----CC-EeecCCee
Q 013883 326 AIAPPHLTWGVRQAH---SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----GF-KVFPSSGT 397 (434)
Q Consensus 326 ~~~~~~~~~~l~~~~---~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~~ 397 (434)
+++++++++.+.... ...+++.+++++.++.++|+..+ ++++++++++++.+++.|+++ +. ...++.|.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~ 355 (429)
T 3k28_A 279 YGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT---PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGS 355 (429)
T ss_dssp EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETT
T ss_pred EEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeecc
Confidence 999999887765422 23467889999999999999754 456667777777777776653 32 34455566
Q ss_pred EEEeeecCCCCCC-----------CHHHHHHHHHHhcCeEEECCC
Q 013883 398 YFVVVDHTPFGHE-----------TDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 398 ~~~~~~~~~~~~~-----------~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
|+.| .+...... ...+++++|+++ ||.+.||.
T Consensus 356 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~ 398 (429)
T 3k28_A 356 MIGI-FFTDEPVINYDAAKSSNLQFFAAYYREMVEQ-GVFLPPSQ 398 (429)
T ss_dssp EEEE-ESSSSCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSST
T ss_pred EEEE-EEecCCcccccccccccHHHHHHHHHHHHHC-CeEEecCC
Confidence 5544 33221110 135677888765 99999963
No 162
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.95 E-value=6.5e-28 Score=235.83 Aligned_cols=295 Identities=12% Similarity=0.090 Sum_probs=205.8
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC----CCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCCh-HH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG----KNQYAR---GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGC-TE 181 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~----~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~-~~ 181 (434)
..+++..|.+ ++|+.+++++.+.+.+. ...|.. ..+..++.+++.+.+.+.+|.. +++ +|++++|+ ++
T Consensus 3 ~~~~~~~g~~--~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~-~v~~~~g~gt~ 78 (360)
T 1w23_A 3 QVFNFNAGPS--ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDY-QILFLQGGASL 78 (360)
T ss_dssp CCEECCSSSC--CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTE-EEEEESSHHHH
T ss_pred ceEeecCCCc--CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCc-eEEEECCcchH
Confidence 3567777743 66788888888876531 111212 2233445566666666666653 345 89999999 99
Q ss_pred HHHHHHHHccCC---CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHh-hcccCCcEEEecCCCCCccc
Q 013883 182 AIAATILGLINP---GDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKS-TISKNTRAILMNTPHNPTGK 257 (434)
Q Consensus 182 ai~~~~~~l~~~---gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~-~i~~~~~~i~~~~p~NPTG~ 257 (434)
++.+++.+++.+ ||.|+++.++|.. ...+...| +++.++++++++.+|++++++ ++++++++|++++|+||||.
T Consensus 79 al~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~ 156 (360)
T 1w23_A 79 QFTMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGT 156 (360)
T ss_dssp HHHHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTE
T ss_pred HHHHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcce
Confidence 999999998865 5667777666654 34467789 999999875344589999999 88889999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHH
Q 013883 258 MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVR 337 (434)
Q Consensus 258 ~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~ 337 (434)
+++ + | +++||+++|+||+|..+... ..+..+ .+++.|+||.+|++| +||++++++++++++
T Consensus 157 ~~~--~---i---~~~~~~~li~D~a~~~~~~~---~~~~~~------di~~~s~sK~~~~~G--~G~~~~~~~~~~~~~ 217 (360)
T 1w23_A 157 QYQ--N---F---PEINHAPLIADMSSDILSRP---LKVNQF------GMIYAGAQKNLGPSG--VTVVIVKKDLLNTKV 217 (360)
T ss_dssp ECS--S---C---CCCCSSCEEEECTTTTTSSC---CCGGGC------SEEEEETTTTTSCTT--CEEEEEEHHHHCSCC
T ss_pred ecc--c---c---cccCCceEEEechhhcCCCC---cCcccC------CEEEEEcccccCCCC--cEEEEEcHHHHhhcc
Confidence 987 3 2 33899999999999875321 122211 378999999999666 999999988775543
Q ss_pred HHh------------hccccCCchHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHhhhCC-C-Eee-cC--CeeE
Q 013883 338 QAH------------SFLTFATSTPMQWAATAALRAPET--YYEELKRDYSAKKAILVEGLNAVG-F-KVF-PS--SGTY 398 (434)
Q Consensus 338 ~~~------------~~~~~~~~~~~q~a~~~~L~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~-~~--~~~~ 398 (434)
... .....+++...+.++..+|+...+ ++++++++++++++.+.+.|++++ + ... .+ .+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 297 (360)
T 1w23_A 218 EQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLM 297 (360)
T ss_dssp TTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSS
T ss_pred cCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCc
Confidence 321 111234455666666667764322 578889999999999999999875 5 543 12 3566
Q ss_pred EEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 399 FVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
++|+.++.. .+..++.++|. ++||.+.||..
T Consensus 298 ~~~~~~~~~--~~~~~~~~~l~-~~gi~~~~~~~ 328 (360)
T 1w23_A 298 NVTFNLRNE--ELNQQFLAKAK-EQGFVGLNGHR 328 (360)
T ss_dssp EEEEECSSH--HHHHHHHHHHH-HTTEESCBCCT
T ss_pred EEEEEcCCC--ccHHHHHHHHH-HCCeeeecCCC
Confidence 778876421 12456777764 46999999864
No 163
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.95 E-value=1.6e-26 Score=230.45 Aligned_cols=291 Identities=18% Similarity=0.166 Sum_probs=203.7
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC----CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYAR----GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~----~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
+.+.|+.+.++ +.++.+.+++.+++.+....+.. ..|..+..+.+.+.+.+.+|. +++ +|++++|+++++..
T Consensus 28 ~~~yld~~~~~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~~-~v~~~~g~t~al~~ 103 (416)
T 1qz9_A 28 GVIYLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGA--RDG-EVVVTDTTSINLFK 103 (416)
T ss_dssp TCEECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTC--CTT-SEEECSCHHHHHHH
T ss_pred CeEeecCCCcC-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCC--Ccc-cEEEeCChhHHHHH
Confidence 67888887665 56778888998888753211110 012223333344444444443 456 79999999999998
Q ss_pred HHHHcc------CCCCeEE-EcCCCchhHHHHH----HHc--CCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCC
Q 013883 186 TILGLI------NPGDEVI-LFAPFYDSYEATL----SMA--GAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPH 252 (434)
Q Consensus 186 ~~~~l~------~~gd~Vl-v~~p~y~~~~~~~----~~~--G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~ 252 (434)
++.+++ ++||+|+ +..+.|+.+...+ ... |++++.++. ++.+++++++++++|++++|+
T Consensus 104 al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~~~l~~~i~~~~~~v~~~~~~ 175 (416)
T 1qz9_A 104 VLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS--------PEELPQAIDQDTAVVMLTHVN 175 (416)
T ss_dssp HHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS--------GGGHHHHCSTTEEEEEEESBC
T ss_pred HHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc--------HHHHHHHhCCCceEEEEeccc
Confidence 888876 8999754 5556887655433 223 999988875 688999998889999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccccee-eeEEeChh
Q 013883 253 NPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKI-GWAIAPPH 331 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~-G~~~~~~~ 331 (434)
||||.+++ +++|.++|++||+++|+||+|.... ....+..+ +..+++.|++|.++ +|+++ ||++++++
T Consensus 176 nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~---~~~~~~~~----~~d~~~~s~~K~l~-~g~~~~g~l~~~~~ 244 (416)
T 1qz9_A 176 YKTGYMHD---MQALTALSHECGALAIWDLAHSAGA---VPVDLHQA----GADYAIGCTYKYLN-GGPGSQAFVWVSPQ 244 (416)
T ss_dssp TTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT---SCCCHHHH----TCSEEEECSSSTTC-CCTTCCCEEEECTT
T ss_pred cCcccccC---HHHHHHHHHHcCCEEEEEccccccC---cCCChhhc----CCCEEEecCcccCC-CCCCCeEEEEECHH
Confidence 99999997 6779999999999999999997421 11111111 23588899999986 78888 99999988
Q ss_pred hHHHHHHHh-----------------------hccccCCchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 332 LTWGVRQAH-----------------------SFLTFATSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 332 ~~~~l~~~~-----------------------~~~~~~~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
+++.++... .....+.+...+.++..+|+.. ++++++++++++++++.+.+.|++.
T Consensus 245 ~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 324 (416)
T 1qz9_A 245 LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQR 324 (416)
T ss_dssp TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 866554321 1112345666666666666642 2357788899999999999999886
Q ss_pred ----CCEeecCC----eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 388 ----GFKVFPSS----GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 388 ----g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
|+.+..+. .+.++++.+. +..+++++|.+ +||.+.+
T Consensus 325 ~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~l~~-~gi~~~~ 368 (416)
T 1qz9_A 325 CAAHELTLVTPREHAKRGSHVSFEHP-----EGYAVIQALID-RGVIGDY 368 (416)
T ss_dssp HTTSCCEECSCSSGGGBCSEEEEECT-----THHHHHHHHHT-TTEECEE
T ss_pred ccCCCeEEeCCCCHHHcCCEEEEecC-----CHHHHHHHHHh-CCcEecc
Confidence 88887663 2345677763 26678888865 5998754
No 164
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.95 E-value=4e-26 Score=228.00 Aligned_cols=299 Identities=14% Similarity=0.121 Sum_probs=191.5
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCC-CCCC-----CCCCcHHHHHHHH-HHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGK-NQYA-----RGHGVPEFNSAIA-SRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~-~~Y~-----~~~G~~~lr~~ia-~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.++|..+... .++.+.+++.+++.+.. ..|+ +.....++.+.++ +.+.+..|. +...++++|++++
T Consensus 33 ~~i~l~~~~~~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~~v~~~~Gs~a 106 (425)
T 3ecd_A 33 SQVELIASENI--VSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNA----GHANVQPHSGAQA 106 (425)
T ss_dssp HSEECCTTCCC--CCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTC----SEEECCCSSHHHH
T ss_pred cceeeecccCC--CCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCC----CCceeecCchHHH
Confidence 45777655432 27888888887774321 1221 1111112333333 555555553 2123458888999
Q ss_pred HHHHHHHccCCCCeEEEcCCCchh---HHHHHHHcCC--EEEEEEcCCCCCCCCHHHHHhhcc-cCCcEEEecCCCCCcc
Q 013883 183 IAATILGLINPGDEVILFAPFYDS---YEATLSMAGA--KIKCITLRPPDFAIPIEELKSTIS-KNTRAILMNTPHNPTG 256 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~---~~~~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~i~~~~p~NPTG 256 (434)
+..++.+++++||+|++++|+|++ +.......|. +++.++.+++++.+|++.++++++ .++++|++++|+||+.
T Consensus 107 ~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~ 186 (425)
T 3ecd_A 107 NGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRK 186 (425)
T ss_dssp HHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCCCSC
T ss_pred HHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccCCCc
Confidence 999999999999999999999988 3333334455 555666665568999999999997 5899999999999753
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCC-ccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYD-KLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTW 334 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~-~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~ 334 (434)
. ++++|.++|++||+++|+||+|. ++.+.+....... ...+++.|+||.+ +|+|+||++++ +++.+
T Consensus 187 --~---~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~g~~~~~~~~~~~ 254 (425)
T 3ecd_A 187 --L---DFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVE-----HAHVVTSTTHKTL--RGPRGGFVLTNDEEIAK 254 (425)
T ss_dssp --C---CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-----TCSEEEEESSGGG--CCCSCEEEEESCHHHHH
T ss_pred --C---CHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchh-----cCcEEEecCCccc--CCCCcEEEEeCCHHHHH
Confidence 2 46789999999999999999954 4444433222111 1238899999988 57899999998 56766
Q ss_pred HHHHHhhcccc-CCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecC-CeeEEEeeecCCCCCCC
Q 013883 335 GVRQAHSFLTF-ATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPS-SGTYFVVVDHTPFGHET 411 (434)
Q Consensus 335 ~l~~~~~~~~~-~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~ 411 (434)
.+......... +++...+.++..++.. .++++++.+++++++++.+.+.|++.|+.+.++ .+++++|+.+.+.+. +
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~ 333 (425)
T 3ecd_A 255 KINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGL-K 333 (425)
T ss_dssp HHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTC-C
T ss_pred HHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCceEEEEEeCCCCC-C
Confidence 66654433222 3344444444444443 345678889999999999999999999988754 456677777654332 3
Q ss_pred HHHHHHHHHHhcCeEEE
Q 013883 412 DIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 412 ~~~~~~~Ll~~~GV~v~ 428 (434)
...+.+.| +++||.+.
T Consensus 334 ~~~~~~~l-~~~gi~v~ 349 (425)
T 3ecd_A 334 GAQVEQAL-ERAGITCN 349 (425)
T ss_dssp HHHHHHHH-HHTTEECE
T ss_pred HHHHHHHH-HHcCCEec
Confidence 55555555 66799999
No 165
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.94 E-value=6.7e-27 Score=236.35 Aligned_cols=295 Identities=17% Similarity=0.079 Sum_probs=193.6
Q ss_pred CeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..|||+.|.+. +. .++.+.+++.+++.... .| .+..++++++++++.+.++ +++ +|++++|+++|+..+
T Consensus 58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~-~~---~~~~~~~~~la~~l~~~~~---~~~-~v~~~~gg~eA~~~a 129 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV-QY---AASHPLEVRWAERIVAAFP---SIR-KLRFTGSGTETTLLA 129 (453)
T ss_dssp EEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC-SS---CSSCHHHHHHHHHHHHHCT---TCS-EEEEESCHHHHHHHH
T ss_pred EEEECcccHhhcccCCCCHHHHHHHHHHHHhCC-CC---CCCCHHHHHHHHHHHhhCC---CCC-EEEEeCCHHHHHHHH
Confidence 57899888532 22 67889999999887642 23 2356899999999988764 456 899999999999999
Q ss_pred HHH---ccCCCCeEEEcCCCchhHHHHHHH-----------cCCE------EEEEEcCCCCCCCCHHHHHhhccc---CC
Q 013883 187 ILG---LINPGDEVILFAPFYDSYEATLSM-----------AGAK------IKCITLRPPDFAIPIEELKSTISK---NT 243 (434)
Q Consensus 187 ~~~---l~~~gd~Vlv~~p~y~~~~~~~~~-----------~G~~------~~~v~~~~~~~~~d~~~l~~~i~~---~~ 243 (434)
++. +.++ +.|++.+|+|+++...+.. .|.+ +..+++ .|++.+++++++ ++
T Consensus 130 l~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~ 202 (453)
T 2cy8_A 130 LRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP------DDIEGMREVFANHGSDI 202 (453)
T ss_dssp HHHHHHHHCC-CEEEEECC----------------------------CGGGEEEECT------TCHHHHHHHHHHHGGGE
T ss_pred HHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC------CCHHHHHHHHHhcCCCE
Confidence 887 5554 6888889999976553322 1221 223322 389999998873 55
Q ss_pred cEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccce
Q 013883 244 RAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWK 322 (434)
Q Consensus 244 ~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R 322 (434)
++|+++..+||||.+ .+.+++++|.++|++||+++|+||+|.++ +.+.......+...++ +.||||.++ +|+|
T Consensus 203 ~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d----i~s~sK~l~-~G~~ 276 (453)
T 2cy8_A 203 AAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDVQPD----LTCLAKASA-GGLP 276 (453)
T ss_dssp EEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCS----EEEEEGGGG-TTSS
T ss_pred EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCCCCc----EEEEChhhh-CCcc
Confidence 666554446779975 47999999999999999999999999987 4443222211111122 348999999 6999
Q ss_pred eeeEEeChhhHHHHHH-----HhhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC----CCEe-
Q 013883 323 IGWAIAPPHLTWGVRQ-----AHSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV----GFKV- 391 (434)
Q Consensus 323 ~G~~~~~~~~~~~l~~-----~~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~- 391 (434)
+||+++++++++.+.. .....+++.+++.+.++.++|+. . .+++.++++++++.+++.|+++ ++..
T Consensus 277 ~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 353 (453)
T 2cy8_A 277 GGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL---EDDVCAKINDLGQFAREAMNHLFARKGLNWL 353 (453)
T ss_dssp CEEEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred eEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 9999999988876643 11234677888888888888874 2 1334556666666666666543 5433
Q ss_pred ecCCeeEEEeeecCC-----C------------CCCCHHHHHHHHHHhcCeEEECC
Q 013883 392 FPSSGTYFVVVDHTP-----F------------GHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 392 ~~~~~~~~~~~~~~~-----~------------~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
.++.|. ++|+.+.. . ......+++++|++ +||.+.|+
T Consensus 354 ~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~Gv~v~~~ 407 (453)
T 2cy8_A 354 AYGRFS-GFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALIL-EGVDIGGR 407 (453)
T ss_dssp EECCTT-EEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHH-TTEECBTT
T ss_pred EEEeee-EEEEEEeccccccccccccccccccccHHHHHHHHHHHHH-CCeEEeCC
Confidence 455555 56777642 1 00124578888876 49999775
No 166
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.94 E-value=2.4e-26 Score=233.74 Aligned_cols=302 Identities=19% Similarity=0.184 Sum_probs=217.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYAR---GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..+.|+ +... ...+.+.+++.+.+ ...+.|.+ ..|..++++++++++.+.+|.+ . .+++++|+++++..+
T Consensus 67 ~~~~lg-~~~~-~~~p~v~~~~~~~~-~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~---~-~~~~~~ggt~a~~~a 139 (474)
T 1wyu_B 67 TFYPLG-SCTM-KYNPKLHEEAARLF-ADLHPYQDPRTAQGALRLMWELGEYLKALTGMD---A-ITLEPAAGAHGELTG 139 (474)
T ss_dssp SCCCBT-TTCC-CCCCHHHHHHHHTT-SSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCS---E-EECCCSSHHHHHHHH
T ss_pred Cccccc-cccc-cCCHHHHHHHHHHH-HhcCCCCchhhChHHHHHHHHHHHHHHHHHCCC---c-eeecChHHHHHHHHH
Confidence 356777 5322 22334444444432 12234443 5577789999999999888863 2 467889999999876
Q ss_pred HHHc----cCCCC-----eEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCccc
Q 013883 187 ILGL----INPGD-----EVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGK 257 (434)
Q Consensus 187 ~~~l----~~~gd-----~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~ 257 (434)
+.++ .++|| +|+++.|.|+.+...+...|++++.++.++ ++.+|++.|++++++++++|++++| ||||.
T Consensus 140 l~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~-~~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~ 217 (474)
T 1wyu_B 140 ILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP-EGEVDLEALKRELGPHVAALMLTNP-NTLGL 217 (474)
T ss_dssp HHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT-TSSBCHHHHHHHCSTTEEEEEECSS-CTTSC
T ss_pred HHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC-CCCcCHHHHHHhhCCCceEEEEECC-CCCcc
Confidence 5554 35887 999999999999999999999999999874 6889999999999989999999998 68998
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccc-c---ceeeeEEeChhhH
Q 013883 258 MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT-G---WKIGWAIAPPHLT 333 (434)
Q Consensus 258 ~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~-G---~R~G~~~~~~~~~ 333 (434)
+. +++++|+++|++||+++|+|++|..+.++. ..... .+..+++.|++|.|+.+ | +|+||++++++++
T Consensus 218 ~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~--~~~~~----~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~ 289 (474)
T 1wyu_B 218 FE--RRILEISRLCKEAGVQLYYDGANLNAIMGW--ARPGD----MGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLA 289 (474)
T ss_dssp CC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTT--CCHHH----HTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGG
T ss_pred cC--CCHHHHHHHHHHcCCEEEEeCchhhhhccC--CCccc----CCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHH
Confidence 73 368889999999999999999997665421 11111 13568889999999766 4 5999999999887
Q ss_pred HHHHH-H------------------hhccccCCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeec
Q 013883 334 WGVRQ-A------------------HSFLTFATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFP 393 (434)
Q Consensus 334 ~~l~~-~------------------~~~~~~~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 393 (434)
+.+.. . .+...++.+...+.++..+|.. ..++++++.+++.++++++.+.|++.|+++..
T Consensus 290 ~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~ 369 (474)
T 1wyu_B 290 PYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKGYRVPY 369 (474)
T ss_dssp GGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCSS
T ss_pred HhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcEecC
Confidence 65531 0 0112234566677777777764 35678888999999999999999988887743
Q ss_pred CCeeEE-EeeecCCCCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 394 SSGTYF-VVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 394 ~~~~~~-~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
+...+. .++++ +.+. +..+++++|+++ ||.+ |+..
T Consensus 370 ~~~~~~~~~~~~-~~~~-~~~~l~~~L~~~-Gi~~-~~~~ 405 (474)
T 1wyu_B 370 DGPSMHEFVAQP-PEGF-RALDLAKGLLEL-GFHP-PTVY 405 (474)
T ss_dssp CSSCCSCEEEBC-STTC-CHHHHHHHHHHT-TCCC-CEES
T ss_pred CCCcceEEEEEc-CCCC-CHHHHHHHHHHC-Cccc-cccc
Confidence 332221 34554 2232 577899999876 9974 5443
No 167
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.94 E-value=3.5e-26 Score=227.12 Aligned_cols=301 Identities=13% Similarity=0.110 Sum_probs=207.0
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCC------CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYAR------GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~------~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
..++++.+.|. ++.+.+++.+++.+. ...|+. .....++++.+.+.+.+.+|. +++ .|++++| +++
T Consensus 25 ~~~~~~~~~~~---~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~--~~~-~i~~~sG-t~a 97 (405)
T 2vi8_A 25 KIELIASENFV---SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGA--EHA-NVQPHSG-AQA 97 (405)
T ss_dssp SEECCTTCCCC---CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEE-ECCCSSH-HHH
T ss_pred ceeeccCcccC---CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--Cce-EEEecCc-HHH
Confidence 56666554332 788888888877532 122221 112345554344444444443 233 4445666 999
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHH-H--HHHc--CCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcc
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEA-T--LSMA--GAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTG 256 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~-~--~~~~--G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG 256 (434)
+..++.+++++||+|++++|+|+.+.. . +... +.+++.++++++++.+|++.+++++++ ++++|++ +|+|. |
T Consensus 98 ~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~ 175 (405)
T 2vi8_A 98 NMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-P 175 (405)
T ss_dssp HHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-C
T ss_pred HHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-C
Confidence 999999999999999999999987743 1 1223 347888877655788999999999986 8888877 55554 4
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhc-cccceeeeEEeChhhHHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIAPPHLTWG 335 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~~~~~~~~~~~ 335 (434)
... ++++|.++|++||+++|+||+|.......+... ..+ . ...+++.|+||.++ ..| ||+++++++++.
T Consensus 176 ~~~---~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~-~~~-~--~~di~~~s~sK~~~g~~g---G~~~~~~~~~~~ 245 (405)
T 2vi8_A 176 RII---DFAKFREIADEVGAYLMVDMAHIAGLVAAGLHP-NPV-P--YAHFVTTTTHKTLRGPRG---GMILCQEQFAKQ 245 (405)
T ss_dssp SCC---CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC-CST-T--TCSEEEEESSSTTCCCSC---EEEEECHHHHHH
T ss_pred ccC---CHHHHHHHHHHcCCEEEEEccccccccccCcCC-Ccc-c--cCCEEEEeccccCCCCCC---eEEEEcHHHHHH
Confidence 443 378899999999999999999995333221111 111 1 22388999999997 555 999999999888
Q ss_pred HHHHhhccccCCchHHHH-HHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeecC-CeeEEEeeecCCCCCCCH
Q 013883 336 VRQAHSFLTFATSTPMQW-AATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFPS-SGTYFVVVDHTPFGHETD 412 (434)
Q Consensus 336 l~~~~~~~~~~~~~~~q~-a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~ 412 (434)
++.......++.+.+.+. ++..+|+.. .+++++++++++++++.+.+.|+++|+++..+ .+++++|+.+...+. +.
T Consensus 246 l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 324 (405)
T 2vi8_A 246 IDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQL-TG 324 (405)
T ss_dssp HHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTC-CH
T ss_pred HHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEccCCCC-CH
Confidence 877654444454444444 444566642 35788899999999999999999999988764 456788888753332 46
Q ss_pred HHHHHHHHHhcCeEEECCC
Q 013883 413 IAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 413 ~~~~~~Ll~~~GV~v~pG~ 431 (434)
.++.+.| .++||.+.||.
T Consensus 325 ~~~~~~l-~~~gi~v~~g~ 342 (405)
T 2vi8_A 325 KTAEKVL-DEVGITVNKNT 342 (405)
T ss_dssp HHHHHHH-HHHTEECEEEC
T ss_pred HHHHHHH-HHcCceeccCc
Confidence 6777777 45699999985
No 168
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.94 E-value=1e-26 Score=234.78 Aligned_cols=307 Identities=15% Similarity=0.107 Sum_probs=207.0
Q ss_pred CeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCC-CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 110 GAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARG-HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 110 ~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
..+||..|. ..+. .++.+.+++.+++.+.. +... .+..++++++++.+.+..+. +++ +|++++|+++++..
T Consensus 51 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~--~~~-~v~~~~ggsea~~~ 125 (449)
T 3a8u_X 51 KVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD--YSPGFQYGHPLSFQLAEKITDLTPG--NLN-HVFFTDSGSECALT 125 (449)
T ss_dssp EEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS--CCCSSSCCCHHHHHHHHHHHTTSST--TEE-EEEEESSHHHHHHH
T ss_pred EEEECCccHhhccCCCCCHHHHHHHHHHHHhCC--CccccccCCHHHHHHHHHHHHhCCC--CCC-EEEEcCcHHHHHHH
Confidence 467886553 2232 27889999988876532 2222 34456777788877766543 456 89999999999999
Q ss_pred HHHHccC--------CCCeEEEcCCCchhHH-HHHHHcCC------------EEEEEEcCC--C-C-CCCC--------H
Q 013883 186 TILGLIN--------PGDEVILFAPFYDSYE-ATLSMAGA------------KIKCITLRP--P-D-FAIP--------I 232 (434)
Q Consensus 186 ~~~~l~~--------~gd~Vlv~~p~y~~~~-~~~~~~G~------------~~~~v~~~~--~-~-~~~d--------~ 232 (434)
+++.+.. +||+|++.+|+|+++. ..+...|. .+..++.+. . + .++| +
T Consensus 126 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~ 205 (449)
T 3a8u_X 126 AVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALA 205 (449)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHH
Confidence 9988764 6799999999998764 34444432 244444321 1 1 1356 9
Q ss_pred HHHHhhcc----cCCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceE
Q 013883 233 EELKSTIS----KNTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTV 307 (434)
Q Consensus 233 ~~l~~~i~----~~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i 307 (434)
+.|+++++ +++++|+++..+|+||. ..+.+.+++|.++|++||+++|+||+|.+|.+.+....+..+...++
T Consensus 206 ~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d--- 282 (449)
T 3a8u_X 206 DELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPD--- 282 (449)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCS---
T ss_pred HHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCC---
Confidence 99999987 34555554433578997 56788999999999999999999999988765443222222211122
Q ss_pred EEccCChhhcccc-ceeeeEEeChhhHHHHHHH---------hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 013883 308 TMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQA---------HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKK 377 (434)
Q Consensus 308 ~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 377 (434)
+.||||.++ +| +|+||+++++++++.+... ....+++.+.+++.++.++|+..++ +++.+++++++
T Consensus 283 -i~s~sK~l~-~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~ 358 (449)
T 3a8u_X 283 -LMCIAKQVT-NGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK--ENLVQSVAEVA 358 (449)
T ss_dssp -EEEECGGGG-TTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHH
T ss_pred -EEEEccccc-CCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh--cCHHHHHHHHH
Confidence 238999998 68 9999999999988877653 1224667788888888888874322 24566777788
Q ss_pred HHHHHHhhhCC-CE---eecCCeeEEEeeecCCCCCC---CHHHHHHHHHHhcCeEEECC
Q 013883 378 AILVEGLNAVG-FK---VFPSSGTYFVVVDHTPFGHE---TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 378 ~~l~~~L~~~g-~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Ll~~~GV~v~pG 430 (434)
+.+++.|++++ +. ..++ .+.++|+++...... +..+++++|+++ ||.+.||
T Consensus 359 ~~l~~~L~~l~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~ 416 (449)
T 3a8u_X 359 PHFEKALHGIKGAKNVIDIRN-FGLAGAIQIAPRDGDAIVRPFEAGMALWKA-GFYVRFG 416 (449)
T ss_dssp HHHHHHHHTTTTSTTEEEEEE-ETTEEEEEECCBTTBSSHHHHHHHHHHHHH-TEECEEE
T ss_pred HHHHHHHHHHhcCCCeEEEee-eEEEEEEEEecCcccccccHHHHHHHHHHC-CcEEecC
Confidence 88888887642 32 2233 445677777532111 123688888765 9999986
No 169
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.94 E-value=3.6e-26 Score=224.71 Aligned_cols=287 Identities=17% Similarity=0.197 Sum_probs=205.5
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
..+||+.+.|++.+ +.+++.+.+... .|.+..+..+|+++++++++ .+ ++++++|+++++..++.+
T Consensus 7 ~~~~l~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~-~~~~~~~gt~a~~~~~~~ 72 (374)
T 3uwc_A 7 PYSYLERQFADIEP---YLNDLREFIKTA--DFTLGAELEKFEKRFAALHN--------AP-HAIGVGTGTDALAMSFKM 72 (374)
T ss_dssp CSCCHHHHTSSCHH---HHHHHHHHHHHT--CCSSCHHHHHHHHHHHHHTT--------CS-EEEEESCHHHHHHHHHHH
T ss_pred eeeccccCCCCchH---HHHHHHHHHHcC--CcccChhHHHHHHHHHHHhC--------CC-cEEEeCCHHHHHHHHHHH
Confidence 56788887776544 788888777654 46677788999999999886 33 688888999999999999
Q ss_pred c-cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 190 L-INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 190 l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
+ +++||+|+++.|+|+.+...+...|++++.++.+ +++.+|++.+++++++++++|+ |+||||...+ +++|.
T Consensus 73 ~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~---~~~i~ 145 (374)
T 3uwc_A 73 LNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE-NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD---MPALA 145 (374)
T ss_dssp TTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC-TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHH
T ss_pred cCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC-CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC---HHHHH
Confidence 9 9999999999999999999999999999999998 5788999999999988888777 8999999875 67799
Q ss_pred HHHHHcCcEEEEcCcCCccc-cCCCCccccCCCCCCCceEEEccCC--hhhccccceeeeEEeCh-hhHHHHHHHhhcc-
Q 013883 269 SLCIENDVLVFSDEVYDKLA-FEMDHISIASLPGMYERTVTMNSLG--KTFSLTGWKIGWAIAPP-HLTWGVRQAHSFL- 343 (434)
Q Consensus 269 ~la~~~~~~iI~Deay~~~~-~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~~~~~~-~~~~~l~~~~~~~- 343 (434)
++|++||+++|+||+|..+. +++. ....+ ..+++.|++ |.++.+|. .|+++++. ++.+.++......
T Consensus 146 ~~~~~~~~~li~D~~~~~g~~~~~~--~~~~~-----~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~ 217 (374)
T 3uwc_A 146 KIAKKHNLHIVEDACQTILGRINDK--FVGSW-----GQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRNHGL 217 (374)
T ss_dssp HHHHHTTCEEEEECTTCTTCEETTE--ETTSS-----SSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTE
T ss_pred HHHHHcCCEEEEeCCCccCceeCCe--ecccc-----ccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHhcCc
Confidence 99999999999999998653 2221 11111 146777866 99984365 88888764 6767666654311
Q ss_pred -----------ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC--CEeec-CCeeEEEeeecCCCCC
Q 013883 344 -----------TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG--FKVFP-SSGTYFVVVDHTPFGH 409 (434)
Q Consensus 344 -----------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~-~~~~~~~~~~~~~~~~ 409 (434)
.+..+.....+....+ +.+++..++.+++.+.+.+.|++++ +.+.. +.++...|..+. ...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~aa~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 292 (374)
T 3uwc_A 218 INRDVCVEYGINCRMDTIQAVIANRLM----NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYV-LRV 292 (374)
T ss_dssp EETTEESSCCCBCBCCHHHHHHHHHHG----GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEE-EEE
T ss_pred cccCccccccccCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEE-EEc
Confidence 1112222222222222 2345667777788888999998874 55532 222222221110 001
Q ss_pred CCHHHHHHHHHHhcCeEEECCC
Q 013883 410 ETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 410 ~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
.+..++.++|.++ ||.+.+|.
T Consensus 293 ~~~~~l~~~L~~~-gi~v~~~~ 313 (374)
T 3uwc_A 293 KYRDQLFQYLKDN-GIEVKIHY 313 (374)
T ss_dssp TTHHHHHHHHHHT-TBCCBCSC
T ss_pred CCHHHHHHHHHHC-CCccccCC
Confidence 1467888888655 99999885
No 170
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.94 E-value=1.2e-25 Score=220.77 Aligned_cols=273 Identities=21% Similarity=0.225 Sum_probs=202.8
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCC
Q 013883 124 PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-INPGDEVILFAP 202 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p 202 (434)
++.+.+++.+.+..+ .|.+..+..+++++++++++ .+ ++++++|+++++..++.++ +++||+|+++.|
T Consensus 15 ~~~v~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~-~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~ 83 (367)
T 3nyt_A 15 KDKIDAGIQRVLRHG--QYILGPEVTELEDRLADFVG--------AK-YCISCANGTDALQIVQMALGVGPGDEVITPGF 83 (367)
T ss_dssp HHHHHHHHHHHHHHC--CCSSCHHHHHHHHHHHHHHT--------CS-EEEEESCHHHHHHHHHHHTTCCTTCEEEEESS
T ss_pred CHHHHHHHHHHHhcC--CccCChHHHHHHHHHHHHhC--------CC-cEEEeCCHHHHHHHHHHHhCCCCcCEEEECCC
Confidence 456677777766654 45566678899999999986 34 7899999999999999999 899999999999
Q ss_pred CchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 203 FYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 203 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
+|..+...+...|++++.++.+++++.+|++.+++++++++++|+ |+||||... ++++|.++|++||+++|+|+
T Consensus 84 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~---~~~~i~~la~~~~~~li~D~ 157 (367)
T 3nyt_A 84 TYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAII---PVSLYGQCA---DFDAINAIASKYGIPVIEDA 157 (367)
T ss_dssp SCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCC---CHHHHHHHHHHTTCCBEEEC
T ss_pred ccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcCCcEEE---eeCCccChh---hHHHHHHHHHHcCCEEEEEC
Confidence 999999999999999999999876789999999999988888877 788999776 47779999999999999999
Q ss_pred cCCcc-ccCCCCccccCCCCCCCceEEEccC--ChhhccccceeeeEEeC-hhhHHHHHHHhhc------------cccC
Q 013883 283 VYDKL-AFEMDHISIASLPGMYERTVTMNSL--GKTFSLTGWKIGWAIAP-PHLTWGVRQAHSF------------LTFA 346 (434)
Q Consensus 283 ay~~~-~~~~~~~~~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~------------~~~~ 346 (434)
+|... .+++. ....+ . .+.+.|| +|.+|.+|. .|+++++ +++.+.++..... .++.
T Consensus 158 a~~~g~~~~~~--~~~~~---~--di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~ 229 (367)
T 3nyt_A 158 AQSFGASYKGK--RSCNL---S--TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSR 229 (367)
T ss_dssp TTTTTCEETTE--ETTSS---S--SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCC
T ss_pred ccccCCeECCe--eccCC---C--CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCC
Confidence 99853 33322 11111 1 4778887 899985476 8898884 7777777765542 1344
Q ss_pred CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecC-Ce---eEE-EeeecCCCCCCCHHHHHHHHHH
Q 013883 347 TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPS-SG---TYF-VVVDHTPFGHETDIAFCEYLIK 421 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~---~~~-~~~~~~~~~~~~~~~~~~~Ll~ 421 (434)
.+...+.++...|+. +++..++.+++++.+.+.|++.++.+... .+ .++ +.+.+ .+..++.++|.+
T Consensus 230 ~~~~~aa~~~~~l~~----~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~ 300 (367)
T 3nyt_A 230 LDTLQAAILLPKLEI----FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRM-----DNRESVQASLKA 300 (367)
T ss_dssp CCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEEC-----SSHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEe-----CCHHHHHHHHHH
Confidence 566666666666654 34455666777788888888877554322 11 111 22222 146678887765
Q ss_pred hcCeEEECCC
Q 013883 422 EVGVVAIPTS 431 (434)
Q Consensus 422 ~~GV~v~pG~ 431 (434)
+||.+.++.
T Consensus 301 -~GI~~~~~~ 309 (367)
T 3nyt_A 301 -AGVPTAVHY 309 (367)
T ss_dssp -HTCCCBCSC
T ss_pred -CCCceeccC
Confidence 499988763
No 171
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.94 E-value=7e-27 Score=228.95 Aligned_cols=293 Identities=13% Similarity=0.132 Sum_probs=208.4
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC---------CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCc-EEEcCCh
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG---------KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKE-VTVTSGC 179 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~---------~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~-i~~t~G~ 179 (434)
..+++..| | .+.++.+++++.+++.+. ...|.+ +..++++++.+.+.+.+|.+ ++.+ +++|+|+
T Consensus 4 ~~~l~~~~-~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~~--~~~~~i~~t~g~ 77 (362)
T 2c0r_A 4 RAYNFNAG-P-AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGA--VYEAVHNEAQARLLALLGNP--TGYKVLFIQGGA 77 (362)
T ss_dssp CCEECCSS-S-CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSH--HHHHHHHHHHHHHHHHTTCC--SSEEEEEESSHH
T ss_pred ceeeccCC-C-CCCCHHHHHHHHHHHhhhhhcCccccccCCCcH--HHHHHHHHHHHHHHHHhCCC--CCcEEEEECCCc
Confidence 34566655 3 567888998888876431 111211 23567788888888888863 3114 5788999
Q ss_pred HHHHHHHHHHccCCCCeEEEcCCCchhH--HHHHHHcCCEEEEEEcCC-CCC--CCCHHHHHhhcccCCcEEEecCCCCC
Q 013883 180 TEAIAATILGLINPGDEVILFAPFYDSY--EATLSMAGAKIKCITLRP-PDF--AIPIEELKSTISKNTRAILMNTPHNP 254 (434)
Q Consensus 180 ~~ai~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~-~~~--~~d~~~l~~~i~~~~~~i~~~~p~NP 254 (434)
++++.+++.+++++||+|++.++.++.+ ...++..| +++.++++. .++ .+|.+.++ +++++++|++++|+||
T Consensus 78 t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~~~n~ 154 (362)
T 2c0r_A 78 STQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTSNETI 154 (362)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEESEETT
T ss_pred hHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeCCcCc
Confidence 9999999999999999999887765553 46677789 999999863 223 35666554 6778999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHH
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~ 334 (434)
||.+++ ++++| +|+++|+|++|..+.. ...+. . ..+++.|++|.+|++| +||+++++++++
T Consensus 155 tG~~~~--~l~~i------~~~~vivD~a~~~~~~---~~~~~---~---~d~~~~s~~K~~g~~G--~G~l~~~~~~~~ 215 (362)
T 2c0r_A 155 EGAQFK--AFPDT------GSVPLIGDMSSDILSR---PFDLN---Q---FGLVYAGAQKNLGPSG--VTVVIVREDLVA 215 (362)
T ss_dssp TTEECS--SCCCC------TTSCEEEECTTTTTSS---CCCGG---G---CSEEEEETTTTTCCSS--CEEEEEEGGGSS
T ss_pred cceecc--ccccc------CCCEEEEEChhhccCC---ccchh---H---CcEEEEeccccccCcC--cEEEEEcHHHHh
Confidence 999754 34444 8999999999986532 11111 1 1477889999999888 999999988765
Q ss_pred HHHHH------------hhccccCCchHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHhhhCC-C-EeecC---C
Q 013883 335 GVRQA------------HSFLTFATSTPMQWAATAALRAPET--YYEELKRDYSAKKAILVEGLNAVG-F-KVFPS---S 395 (434)
Q Consensus 335 ~l~~~------------~~~~~~~~~~~~q~a~~~~L~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~---~ 395 (434)
.+... .....++++.+.+.++..+|+...+ ++++++++++++++++.+.|+++| + .+..+ .
T Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 295 (362)
T 2c0r_A 216 ESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSR 295 (362)
T ss_dssp SCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGB
T ss_pred hccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHc
Confidence 54321 1123467788888999888875333 578889999999999999999987 6 76421 2
Q ss_pred eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 396 GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
++.++++.+.. + .++.+++++|. ++||.+.||..|
T Consensus 296 ~~~~~~~~~~~-~-~~~~~~~~~L~-~~gi~~~~g~~~ 330 (362)
T 2c0r_A 296 SDMNITFRLAS-E-ELEKEFVKASE-QEGFVGLKGHRS 330 (362)
T ss_dssp CSSEEEEECSC-H-HHHHHHHHHHH-HTTEESCBCCTT
T ss_pred CCcEEEEEcCC-c-chHHHHHHHHH-HCCCeeccCCCC
Confidence 33455666532 1 13567888775 559999998754
No 172
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.94 E-value=6.7e-27 Score=237.05 Aligned_cols=298 Identities=17% Similarity=0.149 Sum_probs=201.0
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~ 189 (434)
..+||..+.+. +.+.+++.+++..+...|.+..+..+|+++++++++ .+ ++++++|+++|+..++.+
T Consensus 42 ~ylD~~~~~~~----~~v~~a~~~~l~~~~~~y~~~~~~~~l~~~la~~~~--------~~-~v~~t~~gt~A~~~al~~ 108 (467)
T 2oqx_A 42 VFIDLLTDSGT----GAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFG--------YQ-YTIPTHQGRGAEQIYIPV 108 (467)
T ss_dssp CSEECSCCSSC----SCCCHHHHHHTTSCCCCSSSCHHHHHHHHHHHHHHC--------CS-EEEEEC--CCSHHHHHHH
T ss_pred eeEecccCCCc----HHHHHHHHHHhccCcceeccCchhHHHHHHHHHHhC--------cC-cEEEcCCcHHHHHHHHHH
Confidence 45666554333 667777777776555678877788899999999986 24 799999999999999999
Q ss_pred ccCC-----C----CeEEEcCCCchhHHHHHHHcCCEEEEEEcC----C-----CCCCCCHHHHHhhccc----CCcEEE
Q 013883 190 LINP-----G----DEVILFAPFYDSYEATLSMAGAKIKCITLR----P-----PDFAIPIEELKSTISK----NTRAIL 247 (434)
Q Consensus 190 l~~~-----g----d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~----~-----~~~~~d~~~l~~~i~~----~~~~i~ 247 (434)
++++ | |+|++..+.|..+.......|+.+...... . .++.+|++.|++++++ ++++|+
T Consensus 109 ~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi 188 (467)
T 2oqx_A 109 LIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIV 188 (467)
T ss_dssp HHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEE
T ss_pred HhccccccCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEE
Confidence 9888 8 998887555566666677778877654211 1 2456899999999973 789999
Q ss_pred ecCCCCCc-ccCCCHHHHHHHHHHHHHcCcEEEEcCcCCc----------cccCCCCccccCCC----CCCCceEEEccC
Q 013883 248 MNTPHNPT-GKMFTREELNVIASLCIENDVLVFSDEVYDK----------LAFEMDHISIASLP----GMYERTVTMNSL 312 (434)
Q Consensus 248 ~~~p~NPT-G~~~~~e~l~~i~~la~~~~~~iI~Deay~~----------~~~~~~~~~~~~~~----~~~~~~i~i~S~ 312 (434)
+++||||| |.+++.+++++|+++|++||+++|+|+++.. ..+.+. ....+. ...+ +++.|+
T Consensus 189 ~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~--~~~~~~~~~~~~~d--~~~~s~ 264 (467)
T 2oqx_A 189 ATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDW--TIEQITRETYKYAD--MLAMSA 264 (467)
T ss_dssp EESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTS--CHHHHHHHHGGGCS--EEEEES
T ss_pred EeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCc--cHHHHhhhhhccCC--eEEEec
Confidence 99999998 8999999999999999999999999976543 122221 121111 1122 457899
Q ss_pred Chhhccc-cceeeeEEeChh-hHHHHHHHhhcc-------ccCC-chHHHHHHHHHHhCChHHH-HHHHHHHHHHHHHHH
Q 013883 313 GKTFSLT-GWKIGWAIAPPH-LTWGVRQAHSFL-------TFAT-STPMQWAATAALRAPETYY-EELKRDYSAKKAILV 381 (434)
Q Consensus 313 SK~~g~~-G~R~G~~~~~~~-~~~~l~~~~~~~-------~~~~-~~~~q~a~~~~L~~~~~~~-~~~~~~~~~~~~~l~ 381 (434)
+|.+|++ | ||++++++ +++.+...+... .++. +.....++...|.. ++ ++..++..++++.+.
T Consensus 265 sK~~g~~~G---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~---~~~~~~~~~~~~~~~~l~ 338 (467)
T 2oqx_A 265 KKDAMVPMG---GLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD---GMNLDWLAYRIAQVQYLV 338 (467)
T ss_dssp SSTTCCSSC---EEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCc---eEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHh---hhhHHHHHHHHHHHHHHH
Confidence 9999866 4 78888877 555444333211 1111 22222222222222 12 123344567788888
Q ss_pred HHhhhCCCEeecCCeeEEEeeecCC--CCCCC----HHHHHHHHHHhcCeEEECCC
Q 013883 382 EGLNAVGFKVFPSSGTYFVVVDHTP--FGHET----DIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 382 ~~L~~~g~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.|++.|+.+. +.+++++|+++.. .+... ..+++++|++++||.+.||.
T Consensus 339 ~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~ 393 (467)
T 2oqx_A 339 DGLEEIGVVCQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIG 393 (467)
T ss_dssp HHHHHTTCCEE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEES
T ss_pred HHHHHCCCeee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccc
Confidence 99988888877 7778888887632 11111 34458888566799999954
No 173
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.94 E-value=6.9e-26 Score=228.63 Aligned_cols=299 Identities=18% Similarity=0.163 Sum_probs=209.7
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC-CCCCCCC---CCcHHHH--HHHH-HHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG-KNQYARG---HGVPEFN--SAIA-SRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~-~~~Y~~~---~G~~~lr--~~ia-~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.|+|..+ +++ .++.+.+++.+.+.+. ...|+.. .|...++ ++++ +.+.+.+|.+ . ..++++|++++
T Consensus 46 ~~i~l~~~-~~~-~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~--~--~~v~~~sGs~a 119 (447)
T 3h7f_A 46 DTLEMIAS-ENF-VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE--F--ANVQPHSGAQA 119 (447)
T ss_dssp HSEECCTT-CCC-CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS--E--EECCCSSHHHH
T ss_pred CceeEecC-CCC-CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCC--c--eEEEeCCHHHH
Confidence 56888554 333 3788888887776532 1223321 2444443 5555 6666666642 1 23337777899
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHH-H----HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcc
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYE-A----TLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTG 256 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~-~----~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG 256 (434)
+..++.+++++||+|++++|+|..+. . .+...+..++.++++++++.+|++.+++++.. ++++|++++|+||++
T Consensus 120 ~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~ 199 (447)
T 3h7f_A 120 NAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRV 199 (447)
T ss_dssp HHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSC
T ss_pred HHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCc
Confidence 99999999999999999999987721 1 12224556777777766788999999999964 789999999999998
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcCcCC-ccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHH
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDEVYD-KLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG 335 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~Deay~-~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~ 335 (434)
. ++++|.++|++||+++|+||+|. ++.+.+...... . ...+++.|+||.++ |+|.||+++++++++.
T Consensus 200 ~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~--~---~~di~~~s~sK~l~--G~~gG~i~~~~~~~~~ 267 (447)
T 3h7f_A 200 L-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV--P---HADVVSTTVHKTLG--GGRSGLIVGKQQYAKA 267 (447)
T ss_dssp C-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST--T---TCSEEEEESSGGGC--CCSCEEEEECGGGHHH
T ss_pred c-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC--C---CCcEEEecCCcCCC--CCCeEEEEECHHHHHH
Confidence 6 57889999999999999999974 444444322211 1 22377999999875 8999999999999988
Q ss_pred HHHHhhccccCC-chHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhC-----CCEeec-CCeeEEEeeecCCC
Q 013883 336 VRQAHSFLTFAT-STPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAV-----GFKVFP-SSGTYFVVVDHTPF 407 (434)
Q Consensus 336 l~~~~~~~~~~~-~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~-~~~~~~~~~~~~~~ 407 (434)
+.........+. ....+.++..++.. .++++++.++++.++++.+.+.|++. |+++.. +..++++|+++.+.
T Consensus 268 l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (447)
T 3h7f_A 268 INSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDS 347 (447)
T ss_dssp HHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTS
T ss_pred HhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCC
Confidence 877654444433 33335555555554 34467888999999999999999987 898865 34566777877554
Q ss_pred CCCCHHHHHHHHHHhcCeEEE
Q 013883 408 GHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 408 ~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
+. +.+.+.++++++||.+.
T Consensus 348 ~~--~~~~~~~~l~~~GI~v~ 366 (447)
T 3h7f_A 348 PL--DGQAAEDLLHEVGITVN 366 (447)
T ss_dssp SC--CHHHHHHHHHHTTEECB
T ss_pred CC--CHHHHHHHHHHCCeEEe
Confidence 43 33455556677899998
No 174
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.94 E-value=1.7e-26 Score=232.16 Aligned_cols=298 Identities=17% Similarity=0.139 Sum_probs=200.8
Q ss_pred CeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..|||..|.+. +. .++.+.+++.+++.++. .|. +..++++++++.+.+..+ +.+ +|++++|+++++..+
T Consensus 57 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~-~~~---~~~~~~~~l~~~la~~~~---~~~-~v~~~~sgseA~~~a 128 (434)
T 2epj_A 57 RIVDLVLAYGPLILGHKHPRVLEAVEEALARGW-LYG---APGEAEVLLAEKILGYVK---RGG-MIRFVNSGTEATMTA 128 (434)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS-CCS---SCCHHHHHHHHHHHHHHC---TTC-EEEEESSHHHHHHHH
T ss_pred EEEEcccchhcccCCCCCHHHHHHHHHHHHhCC-CCC---CCCHHHHHHHHHHHHhCC---CCC-EEEEeCCHHHHHHHH
Confidence 57899887532 22 57889999999987742 221 223555666666665553 356 899999999999999
Q ss_pred HHHc--cCCCCeEEEcCCCchhHHHHHH--------------HcCC------EEEEEEcCCCCCCCCHHHHHhhccc---
Q 013883 187 ILGL--INPGDEVILFAPFYDSYEATLS--------------MAGA------KIKCITLRPPDFAIPIEELKSTISK--- 241 (434)
Q Consensus 187 ~~~l--~~~gd~Vlv~~p~y~~~~~~~~--------------~~G~------~~~~v~~~~~~~~~d~~~l~~~i~~--- 241 (434)
++.. +.++++|++.+|+|+++...+. ..|. +++.+++. |++.+++++++
T Consensus 129 l~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~------d~~~le~~l~~~~~ 202 (434)
T 2epj_A 129 IRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYN------DVEALERVFAEYGD 202 (434)
T ss_dssp HHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEETT------CHHHHHHHHHHHGG
T ss_pred HHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCC------CHHHHHHHHHhCCC
Confidence 8872 3346788898999987543221 1232 35555542 79999998874
Q ss_pred CCcEEEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc
Q 013883 242 NTRAILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG 320 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 320 (434)
++++|+++..+|+||.++ +.+.+++|.++|++||+++|+||+|.+| ..+.......+...++ +.||||.++ .|
T Consensus 203 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d----i~s~sK~l~-~G 276 (434)
T 2epj_A 203 RIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNIEGD----IIVLGKIIG-GG 276 (434)
T ss_dssp GEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTCCCS----EEEEEGGGG-TT
T ss_pred CEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCCCCC----eeeecchhc-CC
Confidence 556665554467899866 7999999999999999999999999987 3332221111111122 459999999 59
Q ss_pred ceeeeEEeChhhHHHHHHHh---hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----CCEe-e
Q 013883 321 WKIGWAIAPPHLTWGVRQAH---SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----GFKV-F 392 (434)
Q Consensus 321 ~R~G~~~~~~~~~~~l~~~~---~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~-~ 392 (434)
+|+||+++++++++.+.... ...+++.+++.+.++.++|+..++ +++.++++++++++++.|+++ ++.. .
T Consensus 277 ~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 354 (434)
T 2epj_A 277 FPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE--EPVYSVSREAAKALEEAASEVLDRTGLPYTI 354 (434)
T ss_dssp SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred cceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 99999999998877665421 224667888888888888874322 345666777777777777653 5542 3
Q ss_pred cCCeeEEEeeecCCCCC-----------CCHHHHHHHHHHhcCeEEECCC
Q 013883 393 PSSGTYFVVVDHTPFGH-----------ETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 393 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
++.|. ++|+.+..... ....+++++|++ +||.+.||.
T Consensus 355 ~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~ 402 (434)
T 2epj_A 355 NRVES-MMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLR-RGVFIAPSN 402 (434)
T ss_dssp EEETT-EEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHH-TTEECCSST
T ss_pred EEeee-EEEEEEeCCCcccchhccccCHHHHHHHHHHHHH-CCeEEeccC
Confidence 44444 56676643110 124578888875 599999985
No 175
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.94 E-value=1.6e-25 Score=222.13 Aligned_cols=275 Identities=15% Similarity=0.110 Sum_probs=200.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCC--cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-cCCCCeEEEcC
Q 013883 125 DFVKDAAIQAIRDGKNQYARGHG--VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-INPGDEVILFA 201 (434)
Q Consensus 125 ~~v~~~~~~~~~~~~~~Y~~~~G--~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~ 201 (434)
+.+.+++.+++.. .|.+..| ..+||++++++++ .+ ++++++|+++++.+++.++ +++||+|+++.
T Consensus 12 ~~v~~a~~~~~~~---~~~~~~g~~~~~l~~~la~~~~--------~~-~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~ 79 (394)
T 1o69_A 12 GNELKYIEEVFKS---NYIAPLGEFVNRFEQSVKDYSK--------SE-NALALNSATAALHLALRVAGVKQDDIVLASS 79 (394)
T ss_dssp CCHHHHHHHHHHH---TTTSCTTHHHHHHHHHHHHHHC--------CS-EEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred HHHHHHHHHHHHc---CCccCCChHHHHHHHHHHHHhC--------CC-cEEEeCCHHHHHHHHHHHcCCCCCCEEEECC
Confidence 4567777777765 3666567 8899999999986 24 8999999999999999999 99999999999
Q ss_pred CCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc---CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEE
Q 013883 202 PFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK---NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLV 278 (434)
Q Consensus 202 p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~---~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~i 278 (434)
|+|+.+...+...|++++.++.+ +++.+|++.+++++++ ++++|++++ |||... ++++|.++|+++|+++
T Consensus 80 ~~~~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~---~l~~i~~l~~~~~~~l 152 (394)
T 1o69_A 80 FTFIASVAPICYLKAKPVFIDCD-ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAA---KMDEIVEICKENDIVL 152 (394)
T ss_dssp SSCGGGTHHHHHTTCEEEEECBC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCC---CHHHHHHHHHHTTCEE
T ss_pred CccHHHHHHHHHcCCEEEEEEeC-CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChh---hHHHHHHHHHHcCCEE
Confidence 99999999999999999999988 4788999999999987 789998874 899655 5778999999999999
Q ss_pred EEcCcCC-ccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHHHHHHHhhccccC----------
Q 013883 279 FSDEVYD-KLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLTFA---------- 346 (434)
Q Consensus 279 I~Deay~-~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~~~~---------- 346 (434)
|+||+|. ++.+.+.. ...+ .+ +.+.||||..+++|.|+||++++ +++++.++.........
T Consensus 153 i~Dea~~~g~~~~~~~--~~~~---~~--~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g 225 (394)
T 1o69_A 153 IEDAAEALGSFYKNKA--LGTF---GE--FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYG 225 (394)
T ss_dssp EEECTTCTTCEETTEE--TTSS---SS--EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCC
T ss_pred EEECcCcccceeCCcc--cccc---cC--cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccC
Confidence 9999998 55554321 1111 12 45566654444557799999995 78888887764332111
Q ss_pred ----CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCC----eeE-EEeeecCCCC---------
Q 013883 347 ----TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSS----GTY-FVVVDHTPFG--------- 408 (434)
Q Consensus 347 ----~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~-~~~~~~~~~~--------- 408 (434)
.+.....++...++ ++++.+++++++++.+.+.|+++ +.+.++. +++ ++++.+.+..
T Consensus 226 ~~~~~~~~~aa~~l~~l~----~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 300 (394)
T 1o69_A 226 YNYRLSNVLGAIGVAQME----VLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQKD 300 (394)
T ss_dssp CBCBCCHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEE
T ss_pred cccCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhcccccccc
Confidence 12222222222233 46667788889999999999887 6665542 343 2445443210
Q ss_pred ----------CCCHHHHHHHHHHhcCeEEECCC
Q 013883 409 ----------HETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 409 ----------~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
..+..++.+.|.+ +||.+++|.
T Consensus 301 ~~~~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~ 332 (394)
T 1o69_A 301 INISQKNITLHPKISKLIEDLKN-KQIETRPLW 332 (394)
T ss_dssp EECCCCCCCCCHHHHHHHHHHHH-TTCCCBCCC
T ss_pred ccccccccccccCHHHHHHHHHH-cCCcccccC
Confidence 0135678777755 699999984
No 176
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.94 E-value=1.1e-25 Score=228.87 Aligned_cols=309 Identities=14% Similarity=0.091 Sum_probs=214.2
Q ss_pred CCeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQG--FPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..| ...+. .+|.+.+++.+++.+..+.+.. .+..+++.++++++.+.++. +.+ +|++++|+++|+..
T Consensus 54 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~-~~~~~~~~~la~~l~~~~~~--~~~-~v~~~~sGseA~~~ 129 (476)
T 3i5t_A 54 RRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPW-YMATSPAARLAEKIATLTPG--DLN-RIFFTTGGSTAVDS 129 (476)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTT-TCBCHHHHHHHHHHHTTSST--TCC-EEEEESSHHHHHHH
T ss_pred CEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccC-ccCCHHHHHHHHHHHhcCCC--CcC-EEEEeCchHHHHHH
Confidence 357888766 22333 4788999999998774433332 45678899999999887753 345 79999999999999
Q ss_pred HHHHccC--------CCCeEEEcCCCchhHHHHHHHcCCE-------------EEEEEcCC--CCCCCC--------HHH
Q 013883 186 TILGLIN--------PGDEVILFAPFYDSYEATLSMAGAK-------------IKCITLRP--PDFAIP--------IEE 234 (434)
Q Consensus 186 ~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~--~~~~~d--------~~~ 234 (434)
+++.+.. .++.|++.+|.|+++......++.. +..++... .++..| ++.
T Consensus 130 Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (476)
T 3i5t_A 130 ALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQE 209 (476)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHH
Confidence 9988863 3579999999999887665544332 22333211 111222 788
Q ss_pred HHhhcc----cCCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCcccc-CCCCCCCceEE
Q 013883 235 LKSTIS----KNTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIA-SLPGMYERTVT 308 (434)
Q Consensus 235 l~~~i~----~~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~-~~~~~~~~~i~ 308 (434)
|++++. +++++|+++.++|++|. +++.+.+++|.++|++||+++|+||+|.+|.+.|...... .+...++
T Consensus 210 le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pd---- 285 (476)
T 3i5t_A 210 FEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPD---- 285 (476)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCS----
T ss_pred HHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcc----
Confidence 888886 35677778777888886 7788899999999999999999999999987766543333 3322223
Q ss_pred EccCChhhcccc-ceeeeEEeChhhHHHHHHH-------hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 309 MNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQA-------HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 309 i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
+.+|||.++ .| +|+|++++++++++.+... ....+++.+++++.++.++|+..++ +++.++++++.+++
T Consensus 286 i~t~sK~l~-~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~--~~~~~~~~~~~~~l 362 (476)
T 3i5t_A 286 IITFAKGVT-SGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER--EGIVDQAREMADYF 362 (476)
T ss_dssp EEEECGGGG-TTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHH
T ss_pred hhhhhhhhc-CCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHH
Confidence 337899999 68 9999999999998887653 2335788899999999999975321 33455666666666
Q ss_pred HHHhhhC----CCEeecCCeeEEEeeecCCCCC--C-------CHHHHHHHHHHhcCeEEECC
Q 013883 381 VEGLNAV----GFKVFPSSGTYFVVVDHTPFGH--E-------TDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 381 ~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~Ll~~~GV~v~pG 430 (434)
++.|+++ .+..+++.|.|+ ++++..... . ...+++++|+++ ||.+.|.
T Consensus 363 ~~~L~~l~~~~~v~~v~~~G~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~ 423 (476)
T 3i5t_A 363 AAALASLRDLPGVAETRSVGLVG-CVQCLLDPTRADGTAEDKAFTLKIDERCFEL-GLIVRPL 423 (476)
T ss_dssp HHHHHTTTTSTTEEEEEEETTEE-EEEECCC-----CCHHHHHHHHHHHHHHHHT-TEECEEE
T ss_pred HHHHHHHhcCCCeEEEEecCcee-EEEEecCccccccccchhHHHHHHHHHHHHC-CCEEEec
Confidence 6666653 234455566654 444432110 0 145677778765 9999884
No 177
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.94 E-value=3.8e-25 Score=220.59 Aligned_cols=298 Identities=15% Similarity=0.080 Sum_probs=194.3
Q ss_pred eeEeCCCCCCCCCcHHHHHHHHHHHHcCC-C------CCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 111 AINLGQGFPNFDGPDFVKDAAIQAIRDGK-N------QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 111 ~i~l~~g~p~~~~~~~v~~~~~~~~~~~~-~------~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
.+.+..+. ++ .++.+.+++.+++.+.. . .|........+++...+.+.+.+|. +++ +|++++| ++++
T Consensus 32 ~~~~~~~~-n~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~-~v~~~sG-s~a~ 105 (420)
T 3gbx_A 32 HIELIASE-NY-TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--DYA-NVQPHSG-SQAN 105 (420)
T ss_dssp SEECCTTC-CC-CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTC--SEE-ECCCSSH-HHHH
T ss_pred ceeeeccC-CC-CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCC--CCc-eeEecCc-HHHH
Confidence 34554332 22 57888888888774421 1 2222223344454444566655554 344 5666666 8899
Q ss_pred HHHHHHccCCCCeEEEcCCCchhHH---HHHHH--cCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCccc
Q 013883 184 AATILGLINPGDEVILFAPFYDSYE---ATLSM--AGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGK 257 (434)
Q Consensus 184 ~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~--~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~ 257 (434)
..++.+++++||+|+++.|+|..+. ..+.. .+...+.++.+ +++.+|++.+++++++ ++++|++++|+||+
T Consensus 106 ~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~-- 182 (420)
T 3gbx_A 106 FAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID-ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG-- 182 (420)
T ss_dssp HHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEEC-TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--
T ss_pred HHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCC-ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--
Confidence 9999999999999999999998743 22222 33455666666 4678999999999987 69999999999974
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcCcCCccc-cCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeCh---hhH
Q 013883 258 MFTREELNVIASLCIENDVLVFSDEVYDKLA-FEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP---HLT 333 (434)
Q Consensus 258 ~~~~e~l~~i~~la~~~~~~iI~Deay~~~~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~---~~~ 333 (434)
..+ +++|+++|++||+++|+||+|.... +.+..... + ....+++.|+||.++ |.+.||+++++ ++.
T Consensus 183 ~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~--~---~~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~~ 252 (420)
T 3gbx_A 183 VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNP--V---PHAHVVTTTTHKTLA--GPRGGLILAKGGDEELY 252 (420)
T ss_dssp CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCS--T---TTSSEEEEESSGGGC--SCSCEEEEESSCCHHHH
T ss_pred ccC---HHHHHHHHHHcCCEEEEECCcchhceecccCCcc--c---ccCCEEEeecccCCC--CCCceEEEEcCCcHHHH
Confidence 443 7789999999999999999976433 33222111 1 124488999999985 56679999998 677
Q ss_pred HHHHHHhhcccc-CCchHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecC-CeeEEEeeecCCCCCC
Q 013883 334 WGVRQAHSFLTF-ATSTPMQWAATAALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFPS-SGTYFVVVDHTPFGHE 410 (434)
Q Consensus 334 ~~l~~~~~~~~~-~~~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~ 410 (434)
+.+......... +++...+.++..++.. .++++++++++++++++.+.+.|++.|+.+.++ ..++++|+.+.+.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~- 331 (420)
T 3gbx_A 253 KKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNL- 331 (420)
T ss_dssp HHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTC-
T ss_pred HHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCCCCCeEEEEEcCCCCC-
Confidence 666654432222 3334444454445543 356778889999999999999999999988753 455566776644332
Q ss_pred CHHHHHHHHHHhcCeEEEC
Q 013883 411 TDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 411 ~~~~~~~~Ll~~~GV~v~p 429 (434)
+...+.+.| +++||.+.|
T Consensus 332 ~~~~~~~~l-~~~gi~v~~ 349 (420)
T 3gbx_A 332 TGKEADAAL-GRANITVNK 349 (420)
T ss_dssp CHHHHHHHH-HHTTEECEE
T ss_pred CHHHHHHHH-HHCCcEecc
Confidence 355555555 667999998
No 178
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.94 E-value=3.3e-26 Score=229.27 Aligned_cols=297 Identities=17% Similarity=0.122 Sum_probs=202.1
Q ss_pred CeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..|||..|.+ .+. .++.+.+++.++++++. .|. +..++++++++.+.+.++ +++ +|++++|+++++..+
T Consensus 53 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~---~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~ea~~~a 124 (424)
T 2e7u_A 53 RYLDYVMSWGPLILGHAHPKVLARVRETLERGL-TFG---APSPLEVALAKKVKRAYP---FVD-LVRFVNSGTEATMSA 124 (424)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS-CCS---SCCHHHHHHHHHHHHHCT---TCC-EEEEESSHHHHHHHH
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC-CCC---CCCHHHHHHHHHHHHhCC---CCC-EEEEeCCHHHHHHHH
Confidence 5789987742 222 67899999999987642 232 234677778887777664 356 899999999999999
Q ss_pred HHH---ccCCCCeEEEcCCCchhHHHHHHH--------------cCC------EEEEEEcCCCCCCCCHHHHHhhccc--
Q 013883 187 ILG---LINPGDEVILFAPFYDSYEATLSM--------------AGA------KIKCITLRPPDFAIPIEELKSTISK-- 241 (434)
Q Consensus 187 ~~~---l~~~gd~Vlv~~p~y~~~~~~~~~--------------~G~------~~~~v~~~~~~~~~d~~~l~~~i~~-- 241 (434)
++. +.+ ++.|++.+|+|+++...+.. .|. +++.+|+ .|++.+++++++
T Consensus 125 l~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le~~l~~~~ 197 (424)
T 2e7u_A 125 LRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY------NDPEGLREVLKRRG 197 (424)
T ss_dssp HHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT------TCHHHHHHHHHHHG
T ss_pred HHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC------CCHHHHHHHHHhCC
Confidence 886 444 57899999999886543211 122 3444443 279999998863
Q ss_pred CCcEEEecCCCCC-cccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccc
Q 013883 242 NTRAILMNTPHNP-TGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLT 319 (434)
Q Consensus 242 ~~~~i~~~~p~NP-TG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 319 (434)
+..++++++|+|+ ||.++ +.+.+++|.++ ++||+++|+||+|.+| ..+.......+...++ +.||||.+| +
T Consensus 198 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d----i~s~sK~l~-~ 270 (424)
T 2e7u_A 198 EEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGLKPD----LVTLGKILG-G 270 (424)
T ss_dssp GGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTCCCS----EEEECGGGG-T
T ss_pred CCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCCCcc----hhhhhhhhh-C
Confidence 2334445567655 89755 78999999999 9999999999999988 4333222111111122 349999999 6
Q ss_pred cceeeeEEeChhhHHHHHHHh---hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----CCEe-
Q 013883 320 GWKIGWAIAPPHLTWGVRQAH---SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----GFKV- 391 (434)
Q Consensus 320 G~R~G~~~~~~~~~~~l~~~~---~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~- 391 (434)
|+|+||+++++++++.+.... ...+++.+++++.++.++|+..++ .+++.++++++++.+++.|+++ ++..
T Consensus 271 G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 349 (424)
T 2e7u_A 271 GLPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE-NPGYYAYLEDLGARLEAGLKEVLKEKGLPHT 349 (424)
T ss_dssp TSSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH-CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred CcceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 999999999999887665421 224667888889888888875322 2445667777777777777653 6532
Q ss_pred ecCCeeEEEeeecCCCCC-----------CCHHHHHHHHHHhcCeEEECCC
Q 013883 392 FPSSGTYFVVVDHTPFGH-----------ETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+++.|. ++|+++...+. .+..+++++|++ +||.+.||.
T Consensus 350 ~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~ 398 (424)
T 2e7u_A 350 VNRVGS-MITVFFTEGPVVTFQDARRTDTELFKRFFHGLLD-RGIYWPPSN 398 (424)
T ss_dssp EEEETT-EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHT-TTEECCSSS
T ss_pred EEeece-EEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHH-CCeEEeccC
Confidence 344444 66777643110 124568888875 699999985
No 179
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.94 E-value=7.2e-26 Score=229.85 Aligned_cols=310 Identities=16% Similarity=0.106 Sum_probs=210.5
Q ss_pred CCeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHH
Q 013883 109 HGAINLGQG--FPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAA 185 (434)
Q Consensus 109 ~~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~ 185 (434)
...|||..| ...+. .+|.+.+++.+++.+..+.|....+..+++.++++.+.+..+. +.+ +|++++|+++|+..
T Consensus 55 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~--~~~-~v~~~~sGseA~~~ 131 (472)
T 3hmu_A 55 EEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPG--DLN-HVFFAGGGSEANDT 131 (472)
T ss_dssp CEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCT--TEE-EEEEESSHHHHHHH
T ss_pred CEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCC--CCC-EEEEeCCHHHHHHH
Confidence 357888766 22233 4789999999998875545555445567788888888777653 345 89999999999999
Q ss_pred HHHHccC--------CCCeEEEcCCCchhHHHHHHHcCC------------EEEEEEcCC----CCCCCC--------HH
Q 013883 186 TILGLIN--------PGDEVILFAPFYDSYEATLSMAGA------------KIKCITLRP----PDFAIP--------IE 233 (434)
Q Consensus 186 ~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~G~------------~~~~v~~~~----~~~~~d--------~~ 233 (434)
+++.+.. ++++|++.+|+|+++......++. .+..++... .++ .| ++
T Consensus 132 aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~ 210 (472)
T 3hmu_A 132 NIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARAR 210 (472)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHH
Confidence 9998864 468999999999987665555443 244454321 112 34 78
Q ss_pred HHHhhcc----cCCcEEEecCCCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEE
Q 013883 234 ELKSTIS----KNTRAILMNTPHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVT 308 (434)
Q Consensus 234 ~l~~~i~----~~~~~i~~~~p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~ 308 (434)
.|+++++ +++++|+++.++|++|.+. +.+.+++|.++|++||+++|+||+|.+|.+.|.......+...++
T Consensus 211 ~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pd---- 286 (472)
T 3hmu_A 211 ELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPH---- 286 (472)
T ss_dssp HHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCS----
T ss_pred HHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCc----
Confidence 8888886 3456666666677888755 888899999999999999999999999876664333322222222
Q ss_pred EccCChhhccccceeeeEEeChhhHHHHHH--HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHH-HHHHHHHHHhh
Q 013883 309 MNSLGKTFSLTGWKIGWAIAPPHLTWGVRQ--AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYS-AKKAILVEGLN 385 (434)
Q Consensus 309 i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~--~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~-~~~~~l~~~L~ 385 (434)
+.+|||.++..|+|+|++++++++++.+.. .....+++.+++++.++.++|+..++ +++.++++ ++.+++++.|+
T Consensus 287 i~t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~ 364 (472)
T 3hmu_A 287 IMTIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE--ENILDHVRNVAAPYLKEKWE 364 (472)
T ss_dssp EEEECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHTHHHHHHHHHH
T ss_pred eeeechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHH
Confidence 346899998444999999999999988731 12234788899999999998874221 23344455 55555555554
Q ss_pred hC----CCEeecCCeeEEEeeecCCCC----------CCCHHHHHHHHHHhcCeEEECC
Q 013883 386 AV----GFKVFPSSGTYFVVVDHTPFG----------HETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 386 ~~----g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
++ ++..+++.|.|+. +.+.... .....++++.|+++ ||++.|+
T Consensus 365 ~l~~~~~v~~vr~~G~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~ 421 (472)
T 3hmu_A 365 ALTDHPLVGEAKIVGMMAS-IALTPNKASRAKFASEPGTIGYICRERCFAN-NLIMRHV 421 (472)
T ss_dssp GGGGSTTEEEEEEETTEEE-EEECSCGGGTCCBSSCTTHHHHHHHHHHHHT-TBCCEEE
T ss_pred HHhcCCCeEEEEecCceEE-EEEecCccccccccchhHHHHHHHHHHHHHC-CcEEEec
Confidence 43 2445566666544 4432210 00145677888765 9999885
No 180
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.94 E-value=2.1e-25 Score=221.64 Aligned_cols=247 Identities=19% Similarity=0.206 Sum_probs=180.6
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEE
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCIT 222 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~ 222 (434)
...++++.++++++ . ++.+++++| ++++..++.+++++||+|+++.|.|+++...+ ...|++++.++
T Consensus 66 ~~~~l~~~la~~~g----~----~~~i~~~sG-~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 136 (398)
T 1gc0_A 66 TLNLLEARMASLEG----G----EAGLALASG-MGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVD 136 (398)
T ss_dssp HHHHHHHHHHHHHT----C----SEEEEESSH-HHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEEC
T ss_pred HHHHHHHHHHHHhC----C----CcEEEECCH-HHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEEC
Confidence 44567777777664 2 224555555 79999999999999999999999999987766 66799998887
Q ss_pred cCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC
Q 013883 223 LRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM 302 (434)
Q Consensus 223 ~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~ 302 (434)
.. |++.+++++++++++|++++|+||||.+++ +++|+++|++||+++|+||+|..+.+.. .+ .
T Consensus 137 ~~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~---~~-----~ 199 (398)
T 1gc0_A 137 MA------DLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR---PL-----E 199 (398)
T ss_dssp TT------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC---GG-----G
T ss_pred CC------CHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC---ch-----h
Confidence 64 799999999999999999999999999985 7789999999999999999998765431 11 1
Q ss_pred CCceEEEccCChhhcccccee-eeEEeChhhHH-HHHHHhhc-cccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 013883 303 YERTVTMNSLGKTFSLTGWKI-GWAIAPPHLTW-GVRQAHSF-LTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAI 379 (434)
Q Consensus 303 ~~~~i~i~S~SK~~g~~G~R~-G~~~~~~~~~~-~l~~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 379 (434)
.+.++++.|++|.++.+|.|+ ||++++++.+. .++..... ...+.+.+.++++...|+. +....++..++++.
T Consensus 200 ~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~ 275 (398)
T 1gc0_A 200 LGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT----LNLRMDRHCANAQV 275 (398)
T ss_dssp GTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHH
T ss_pred hCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHH
Confidence 245689999999999899998 99999988765 45544443 3456677778877777764 23344555566666
Q ss_pred HHHHhhhCC---------------CEeec----CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 380 LVEGLNAVG---------------FKVFP----SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 380 l~~~L~~~g---------------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
+.+.|++.+ +.+.. ..++++.| .+. ...+.+.+++++.||.+..
T Consensus 276 l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~-~l~-----~~~~~~~~~l~~~~i~~~~ 338 (398)
T 1gc0_A 276 LAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAF-ELK-----GGIGAGRRFMNALQLFSRA 338 (398)
T ss_dssp HHHHHHTCTTEEEEEEC----------------CCTTEEEE-EET-----THHHHHHHHHHHCSSSEEC
T ss_pred HHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEE-EEC-----CCHHHHHHHHHhCCCceec
Confidence 666666532 11221 24565544 442 1334566677778888776
No 181
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.94 E-value=2.5e-26 Score=232.31 Aligned_cols=307 Identities=12% Similarity=0.112 Sum_probs=209.8
Q ss_pred CeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHH
Q 013883 110 GAINLGQG--FPNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~ 186 (434)
..|||..| ...+. .+|.+.+++.+++.+..+ +....+..+...++++.+.+..+. +.+ +|++++|+++++..+
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~L~e~la~~~~~--~~~-~v~~~~sGseA~~~A 151 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNH-VMFGGLTHEPAARLAKLLVDITPA--GLD-TVFFSDSGSVSVEVA 151 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSC-CCSSSEECHHHHHHHHHHHHHSST--TEE-EEEEESSHHHHHHHH
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHHHhccC-ccccccCCHHHHHHHHHHHHhCCC--CcC-EEEEeCcHHHHHHHH
Confidence 56888776 22233 578899999998876432 221222335556666666665543 345 899999999999999
Q ss_pred HHHccC-------CC-CeEEEcCCCchhHHHHHHHcC--------------CEEEEEEcCCCCC-CCCHHHHHhhcc---
Q 013883 187 ILGLIN-------PG-DEVILFAPFYDSYEATLSMAG--------------AKIKCITLRPPDF-AIPIEELKSTIS--- 240 (434)
Q Consensus 187 ~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~G--------------~~~~~v~~~~~~~-~~d~~~l~~~i~--- 240 (434)
++.+.. +| +.|++.+++|+++.......+ ..+..++.....+ ..|++.|+++++
T Consensus 152 lk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~ 231 (457)
T 3tfu_A 152 AKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHA 231 (457)
T ss_dssp HHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCC
Confidence 988864 55 589999999988655544442 1233334332121 247899999987
Q ss_pred cCCcEEEecC-CCCCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcc
Q 013883 241 KNTRAILMNT-PHNPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSL 318 (434)
Q Consensus 241 ~~~~~i~~~~-p~NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 318 (434)
+++++|+++. ++|++|.++ +.+.+++|.++|++||+++|+||+|.+|.+.+.......+...++ +.||||.++
T Consensus 232 ~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pd----iit~sK~l~- 306 (457)
T 3tfu_A 232 GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPD----IMCVGKALT- 306 (457)
T ss_dssp GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS----EEEECGGGG-
T ss_pred CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCce----EEEEChhhh-
Confidence 5678888887 899999866 777899999999999999999999999876654433322222222 239999987
Q ss_pred cc-ceeeeEEeChhhHHHHHHH-----hhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----C
Q 013883 319 TG-WKIGWAIAPPHLTWGVRQA-----HSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----G 388 (434)
Q Consensus 319 ~G-~R~G~~~~~~~~~~~l~~~-----~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g 388 (434)
.| +|+||+++++++++.+... ....+++.+++++.++.++|+..++ +++.++++++++++++.|+++ +
T Consensus 307 gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~ 384 (457)
T 3tfu_A 307 GGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG--QDWRTRITELAAGLTAGLDTARALPA 384 (457)
T ss_dssp TTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHGGGGGSTT
T ss_pred CCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 56 6999999999999888522 2335788899999999888874211 234555666666666666654 3
Q ss_pred CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 389 FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+..+++.|.| +++.+.. + .+..+++++|+++ ||.+.|..
T Consensus 385 v~~vr~~G~~-~~i~l~~-~-~~~~~~~~~l~~~-Gv~v~~~~ 423 (457)
T 3tfu_A 385 VTDVRVCGAI-GVIECDR-P-VDLAVATPAALDR-GVWLRPFR 423 (457)
T ss_dssp EEEEEECSSC-EEEEESS-C-CCHHHHHHHHHHT-TEECCCBT
T ss_pred eeeeecCCeE-EEEEECC-c-ccHHHHHHHHHHC-CeEEEecC
Confidence 4444556654 4556533 1 2467899988876 99998853
No 182
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.94 E-value=7.6e-25 Score=215.07 Aligned_cols=275 Identities=15% Similarity=0.078 Sum_probs=201.7
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc---cCCCCeEE
Q 013883 122 DGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL---INPGDEVI 198 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l---~~~gd~Vl 198 (434)
+.++.+.+++.+.+.+. .|.+..+..+++++++++++ .+ ++++++|+++++..++.++ +++||+|+
T Consensus 10 ~~~~~v~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~-~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl 78 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSK--QLTQGKRSLLFEEALCEFLG--------VK-HALVFNSATSALLTLYRNFSEFSADRNEII 78 (375)
T ss_dssp CCCHHHHHHHHHHHTSS--CCSSSHHHHHHHHHHHHHHT--------CS-EEEEESCHHHHHHHHHHHSSCCCTTSCEEE
T ss_pred CCCHHHHHHHHHHHHcC--cccCChHHHHHHHHHHHHhC--------CC-eEEEeCCHHHHHHHHHHHhcccCCCCCEEE
Confidence 45778889998888653 24444567889999999886 23 7999999999999999999 89999999
Q ss_pred EcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEE
Q 013883 199 LFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLV 278 (434)
Q Consensus 199 v~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~i 278 (434)
++.|+|+.+...+...|++++.++++++ +.+|++.+++++++++++|++++| ||.+.+ +++|.++|++||+++
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~l 151 (375)
T 2fnu_A 79 TTPISFVATANMLLESGYTPVFAGIKND-GNIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSLSF 151 (375)
T ss_dssp ECSSSCTHHHHHHHHTTCEEEECCBCTT-SSBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTCEE
T ss_pred ECCCccHhHHHHHHHCCCEEEEeccCCC-CCCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCCEE
Confidence 9999999999999999999999998763 478999999999888898887766 999886 577899999999999
Q ss_pred EEcCcCCccccCCCCccccCCCCCCCceEEEccCC--hhhccccceeeeEEe-C-hhhHHHHHHHhhccc----------
Q 013883 279 FSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLG--KTFSLTGWKIGWAIA-P-PHLTWGVRQAHSFLT---------- 344 (434)
Q Consensus 279 I~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~~~~-~-~~~~~~l~~~~~~~~---------- 344 (434)
|+||+|..+..... . .+.... .+.+.||| |.+|. | +|++++ + ++++++++.......
T Consensus 152 i~D~a~~~~~~~~~-~---~~~~~~--~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (375)
T 2fnu_A 152 LSDSSHALGSEYQN-K---KVGGFA--LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEV 222 (375)
T ss_dssp EEECTTCTTCEETT-E---ETTSSS--SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEE
T ss_pred EEECccccCCeECC-e---eccccC--CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCcccccccccc
Confidence 99999986543211 1 121111 37788888 99984 6 788887 4 678787776543211
Q ss_pred ------cCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeecC----Cee-EEEeeecCCCCCCCH
Q 013883 345 ------FATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFPS----SGT-YFVVVDHTPFGHETD 412 (434)
Q Consensus 345 ------~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~-~~~~~~~~~~~~~~~ 412 (434)
+..+.....++...+ +++++..++++++++.+.+.|+++ |+.+..+ .++ +++++.+...+..+.
T Consensus 223 ~~~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (375)
T 2fnu_A 223 KSIGHNFRLNEIQSALGLSQL----KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCK 298 (375)
T ss_dssp SSCCCBCCCCHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGH
T ss_pred ccccccCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchH
Confidence 122233222222222 246677888889999999999987 7877654 233 344555532111036
Q ss_pred HHHHHHHHHhcCeEEE
Q 013883 413 IAFCEYLIKEVGVVAI 428 (434)
Q Consensus 413 ~~~~~~Ll~~~GV~v~ 428 (434)
.++.++|.+ +||.+.
T Consensus 299 ~~l~~~L~~-~gi~v~ 313 (375)
T 2fnu_A 299 KLILESLHK-RGILAQ 313 (375)
T ss_dssp HHHHHHHHH-TTEECB
T ss_pred HHHHHHHHH-CCCCcc
Confidence 678888854 599998
No 183
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.94 E-value=5.6e-25 Score=219.48 Aligned_cols=257 Identities=15% Similarity=0.136 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEcCC
Q 013883 150 EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM----AGAKIKCITLRP 225 (434)
Q Consensus 150 ~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~ 225 (434)
+.++++.+.+.+..|. + ++++++|+++++.+++.+++++||+|++++|.|+++...+.. .|++++.++.+
T Consensus 81 p~~~~l~~~la~~~g~----~-~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~- 154 (414)
T 3ndn_A 81 PTVSVFEERLRLIEGA----P-AAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD- 154 (414)
T ss_dssp HHHHHHHHHHHHHHTC----S-EEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-
T ss_pred hHHHHHHHHHHHHHCC----C-cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-
Confidence 3455555555555442 4 688888889999999999999999999999999998777644 99999999875
Q ss_pred CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCc
Q 013883 226 PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYER 305 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~ 305 (434)
|++.+++++++++++|++++|+||||.+.+ +++|+++|++||+++|+||+|....+. . .+ ..+.
T Consensus 155 -----d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~-~--~~-----~~g~ 218 (414)
T 3ndn_A 155 -----DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ-Q--GF-----PLGV 218 (414)
T ss_dssp -----CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC-C--CG-----GGTC
T ss_pred -----CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC-C--ch-----hcCC
Confidence 799999999999999999999999999975 677999999999999999999853321 1 11 1234
Q ss_pred eEEEccCChhhcccc-ceeeeEEeChhhHH-HHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 013883 306 TVTMNSLGKTFSLTG-WKIGWAIAPPHLTW-GVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEG 383 (434)
Q Consensus 306 ~i~i~S~SK~~g~~G-~R~G~~~~~~~~~~-~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~ 383 (434)
.+++.|+||.+|.+| +|+|+++++++.+. .++..........+....+++...++ ++....++..++++.+.+.
T Consensus 219 div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~----~l~~r~~~~~~~a~~l~~~ 294 (414)
T 3ndn_A 219 DVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE----TLAIRVQHSNASAQRIAEF 294 (414)
T ss_dssp SEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG----GHHHHHHHHHHHHHHHHHH
T ss_pred CeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 588999999999778 89999999988776 56654443344445554444444443 3455566667788888888
Q ss_pred hhhC-CCE-eecC----------------CeeEEEeeecCCCC---CCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 384 LNAV-GFK-VFPS----------------SGTYFVVVDHTPFG---HETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 384 L~~~-g~~-~~~~----------------~~~~~~~~~~~~~~---~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
|++. ++. +.-| ..|.++++.+.... .+...+|.+.| +..++.+.+|..|
T Consensus 295 L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l-~~~~~~~s~G~~~ 364 (414)
T 3ndn_A 295 LNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKM-RLIDISNNLGDAK 364 (414)
T ss_dssp HHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHC-SSSEECSCCSCSS
T ss_pred HhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhC-ccceEcCCCCCCC
Confidence 8775 332 2222 13446677764210 11234455554 3457888888754
No 184
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.93 E-value=9.4e-26 Score=226.29 Aligned_cols=306 Identities=17% Similarity=0.117 Sum_probs=191.9
Q ss_pred CCeeEeCCCCC--CCC-CcHHHHHHHHHHHHcCCC-CCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 109 HGAINLGQGFP--NFD-GPDFVKDAAIQAIRDGKN-QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 109 ~~~i~l~~g~p--~~~-~~~~v~~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
...+||..|.. .+. .+|.+.+++.+++.+... .| +. +...++++.+.+..+ .++ ++++++|+++++.
T Consensus 53 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-~~----~~~~~la~~l~~~~~---~~~-~v~~~~sGsea~~ 123 (429)
T 4e77_A 53 KAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGA-PT----EMEVKMAQLVTDLVP---TMD-MVRMVNSGTEATM 123 (429)
T ss_dssp CEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSS-CC----HHHHHHHHHHHHHST---TCS-EEEEESSHHHHHH
T ss_pred CEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCC-CC----HHHHHHHHHHHhhCC---CCC-EEEEeCcHHHHHH
Confidence 36789987743 222 478899999998876432 23 22 445555555555544 255 8999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHH-HcCCEE--EEEEcCCCCC------------CCCHHHHHhhccc--CCcE
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLS-MAGAKI--KCITLRPPDF------------AIPIEELKSTISK--NTRA 245 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~-~~G~~~--~~v~~~~~~~------------~~d~~~l~~~i~~--~~~~ 245 (434)
.+++... .+++.|++.++.|+++...+. ..|... ...+... +. ..|++.+++++++ +..+
T Consensus 124 ~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 202 (429)
T 4e77_A 124 SAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSP-GVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVA 202 (429)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCC------------------CCCT-TSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEE
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcC-CCCCccCCceeecCCCCHHHHHHHHHhcCCCEE
Confidence 9988543 356789999999988765221 111111 1111110 00 1179999999874 2344
Q ss_pred EEecCCCCCc-ccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccccee
Q 013883 246 ILMNTPHNPT-GKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKI 323 (434)
Q Consensus 246 i~~~~p~NPT-G~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~ 323 (434)
+++++|+|++ |.+. +.+.+++|.++|++||+++|+||+|.+| ..+.......+...++ +.||||.++ +|+|+
T Consensus 203 ~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pd----i~t~sK~~~-~G~~~ 276 (429)
T 4e77_A 203 CIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPD----LTCLGKIIG-GGMPV 276 (429)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCS----EEEEEGGGG-TTSCC
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCC----eeeeccccc-CCCCe
Confidence 5556776665 4433 4555999999999999999999999988 5443322222221122 458999999 89999
Q ss_pred eeEEeChhhHHHHHHH---hhccccCCchHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCeeE
Q 013883 324 GWAIAPPHLTWGVRQA---HSFLTFATSTPMQWAATAALRA--PETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTY 398 (434)
Q Consensus 324 G~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~a~~~~L~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 398 (434)
||+++++++++.+... ....+++.+++.+.++.++|+. .++++++.++.....++.|.+.+.+.++....+..+.
T Consensus 277 G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~ 356 (429)
T 4e77_A 277 GAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGG 356 (429)
T ss_dssp EEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETT
T ss_pred EEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeee
Confidence 9999999988776542 1234678889999988888873 2334444444444445555555555565544444555
Q ss_pred EEeeecCCCC-C-----------CCHHHHHHHHHHhcCeEEECCC
Q 013883 399 FVVVDHTPFG-H-----------ETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 399 ~~~~~~~~~~-~-----------~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
++++.+.... . ....+++++|+++ ||.+.||.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~ 400 (429)
T 4e77_A 357 MFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEE-GVYLAPSA 400 (429)
T ss_dssp EEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHT-TEECCSST
T ss_pred EEEEEEccCcccccccccccccHHHHHHHHHHHHHC-CeEEeecC
Confidence 6677764321 0 0126788888765 99999985
No 185
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.93 E-value=2e-25 Score=222.11 Aligned_cols=245 Identities=17% Similarity=0.195 Sum_probs=180.0
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEE
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCIT 222 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~ 222 (434)
+..+|+++++++++ .. + .|++++| ++++..++. ++++||+|++++|.|++....+ +..|++++.++
T Consensus 68 ~~~~l~~~la~~~g------~~-~-~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 137 (403)
T 3cog_A 68 TRNCLEKAVAALDG------AK-Y-CLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVD 137 (403)
T ss_dssp HHHHHHHHHHHHHT------CS-E-EEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred hHHHHHHHHHHHhC------CC-c-EEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEEC
Confidence 56789999999886 21 3 6777777 589999998 8999999999999999855543 56899999988
Q ss_pred cCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcC-cEEEEcCcCCccccCCCCccccCCCC
Q 013883 223 LRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEND-VLVFSDEVYDKLAFEMDHISIASLPG 301 (434)
Q Consensus 223 ~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~-~~iI~Deay~~~~~~~~~~~~~~~~~ 301 (434)
.+ |++.+++++++++++|++++|+||||.+++ +++|+++|+++| +++|+||+|..+.+. .++.
T Consensus 138 ~~------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~---~~~~---- 201 (403)
T 3cog_A 138 CS------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ---RPLA---- 201 (403)
T ss_dssp TT------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC---CTTT----
T ss_pred CC------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC---Cccc----
Confidence 65 799999999999999999999999999996 777999999999 999999999986542 1111
Q ss_pred CCCceEEEccCChhhccccc-eeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 013883 302 MYERTVTMNSLGKTFSLTGW-KIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAI 379 (434)
Q Consensus 302 ~~~~~i~i~S~SK~~g~~G~-R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 379 (434)
.+.++++.|++|.++.+|. |+||++++ +++++.++........+.+.+.++++...|+.....++ +..++...
T Consensus 202 -~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~~r~~----~~~~n~~~ 276 (403)
T 3cog_A 202 -LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKTLHVRME----KHFKNGMA 276 (403)
T ss_dssp -TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHHH----HHHHHHHH
T ss_pred -cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHHHHHH----HHHHHHHH
Confidence 2467999999999986664 79999995 78888888766655666788888888888876332233 23333333
Q ss_pred HHHHhhh--------------C-CCEeecC----CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 380 LVEGLNA--------------V-GFKVFPS----SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 380 l~~~L~~--------------~-g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
+.+.|++ . ++.+.++ .++++.| .+.. .. +.+.+++++.||.+.
T Consensus 277 l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~l~~----~~-~~~~~~l~~~~i~~~ 338 (403)
T 3cog_A 277 VAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTF-YIKG----TL-QHAEIFLKNLKLFTL 338 (403)
T ss_dssp HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEE-EESS----CH-HHHHHHHHHCSSSEE
T ss_pred HHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEE-EecC----CH-HHHHHHHHhCCcceE
Confidence 3333332 2 3443333 3787776 3422 12 344556677788554
No 186
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.93 E-value=1.9e-24 Score=218.33 Aligned_cols=303 Identities=13% Similarity=0.029 Sum_probs=214.5
Q ss_pred eEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCC--CCcEEEcCChHHHHHHHHHH
Q 013883 112 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDP--EKEVTVTSGCTEAIAATILG 189 (434)
Q Consensus 112 i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~--~~~i~~t~G~~~ai~~~~~~ 189 (434)
+++....+ .+.++.+.+.+.+++......|....+..++++++.+++.+.+|.+.+. +..+++++|+++++..++.+
T Consensus 44 ~~~~~f~~-~~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a 122 (452)
T 2dgk_A 44 QNLATFCQ-TWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMA 122 (452)
T ss_dssp TBCSCCSC-CCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHH
T ss_pred cCCCCeeC-CCchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHH
Confidence 34444443 2345678888877776544556666677889999999999998875442 11499999999999999888
Q ss_pred ccC--------CC-----CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcc
Q 013883 190 LIN--------PG-----DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTG 256 (434)
Q Consensus 190 l~~--------~g-----d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG 256 (434)
+.+ +| ++|++++ +|..+...+..+|++++.||.+++++.+|++.|++++++++++|++++|+||||
T Consensus 123 ~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG 201 (452)
T 2dgk_A 123 MKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTG 201 (452)
T ss_dssp HHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTC
T ss_pred HHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCc
Confidence 754 55 5899999 999999999999999999998754689999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHc------CcEEEEcCcCCcccc---CCCCccccCCCCCCCceEEEccCChhhccccceeeeEE
Q 013883 257 KMFTREELNVIASLCIEN------DVLVFSDEVYDKLAF---EMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAI 327 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~------~~~iI~Deay~~~~~---~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~ 327 (434)
.+.+ +++|+++|+++ |+++++|++|.++.. .+... ..+ ...+-..+..+++| +++.|+++||++
T Consensus 202 ~~~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~d~~~~~~hK-~~~~~~~~G~~~ 274 (452)
T 2dgk_A 202 NYEF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV--WDF-RLPRVKSISASGHK-FGLAPLGCGWVI 274 (452)
T ss_dssp BBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC--CST-TSTTEEEEEEETTT-TTCCCSSCEEEE
T ss_pred ccCC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccch--hhc-CCCCCcEEEECccc-ccCCCCCeEEEE
Confidence 9975 66688889885 999999999998753 22211 111 11233456778899 556899999999
Q ss_pred eChh-hH-HHHHHHhhcc---------ccCC---chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEee
Q 013883 328 APPH-LT-WGVRQAHSFL---------TFAT---STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVF 392 (434)
Q Consensus 328 ~~~~-~~-~~l~~~~~~~---------~~~~---~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 392 (434)
++.+ .+ +.+.....+. .++. ....++++...|. .+.++++.+++.++++++.+.|++. ++++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 352 (452)
T 2dgk_A 275 WRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG--REGYTKVQNASYQVAAYLADEIAKLGPYEFI 352 (452)
T ss_dssp ESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred EcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence 9643 32 3221111111 0111 3344555555554 3567888899999999999999998 58876
Q ss_pred c-----CCeeEEEeeecCCCC--CCCHHHHHHHHHHhcCeEE
Q 013883 393 P-----SSGTYFVVVDHTPFG--HETDIAFCEYLIKEVGVVA 427 (434)
Q Consensus 393 ~-----~~~~~~~~~~~~~~~--~~~~~~~~~~Ll~~~GV~v 427 (434)
. +..+++. +.+.+.. ..+..++.++|.++ ||.+
T Consensus 353 ~~~~~~~~~~~v~-f~~~~~~~~~~~~~~l~~~L~~~-Gi~v 392 (452)
T 2dgk_A 353 CTGRPDEGIPAVC-FKLKDGEDPGYTLYDLSERLRLR-GWQV 392 (452)
T ss_dssp EECCTTTBSSEEE-EEECTTCCCSCCHHHHHHHHHHT-TCBC
T ss_pred cCCCCCCCeEEEE-EEecCcccccCCHHHHHHHHHhc-CCee
Confidence 4 3445444 3443211 01347888888765 9853
No 187
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.93 E-value=3.6e-24 Score=211.82 Aligned_cols=247 Identities=13% Similarity=0.150 Sum_probs=186.2
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH----HHHcCCEEEEEE
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LSMAGAKIKCIT 222 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~ 222 (434)
+..+|+++++++++ .+ + .|++++| ++++..++.+++++||+|+++.|.|++.... ++..|++++.++
T Consensus 53 ~~~~l~~~la~~~~------~~-~-~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 123 (386)
T 1cs1_A 53 TRDVVQRALAELEG------GA-G-AVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD 123 (386)
T ss_dssp HHHHHHHHHHHHHT------CS-E-EEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC
T ss_pred cHHHHHHHHHHHhC------CC-c-EEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeC
Confidence 56789999999886 22 4 6777777 8999999999999999999999999985543 366799999887
Q ss_pred cCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC
Q 013883 223 LRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM 302 (434)
Q Consensus 223 ~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~ 302 (434)
.+ |++.+++++++++++|++++|+||||.+++ +++|.++|++||+++|+||+|..+.+.. .+ .
T Consensus 124 ~~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~---~~-----~ 186 (386)
T 1cs1_A 124 QG------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN---PL-----A 186 (386)
T ss_dssp TT------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC---GG-----G
T ss_pred CC------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC---cc-----c
Confidence 64 799999999989999999999999999985 6779999999999999999999876431 11 1
Q ss_pred CCceEEEccCChhhcccccee-eeEEeCh-hhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 303 YERTVTMNSLGKTFSLTGWKI-GWAIAPP-HLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 303 ~~~~i~i~S~SK~~g~~G~R~-G~~~~~~-~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
.+.++++.|++|.++.+|.|+ ||+++++ ++++.++........+.+...++++...++. +....+.+.++++.+
T Consensus 187 ~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l 262 (386)
T 1cs1_A 187 LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRMELAQRNAQAI 262 (386)
T ss_dssp GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHH
T ss_pred cCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH----HHHHHHHHHHHHHHH
Confidence 346789999999998899887 9999986 7888887766554556777777777777663 344455666777777
Q ss_pred HHHhhhCC-CEee--c----------------CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 381 VEGLNAVG-FKVF--P----------------SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 381 ~~~L~~~g-~~~~--~----------------~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
.+.|++++ +... + ..++++.| .+.. ...++.+. +++.||.+.+
T Consensus 263 ~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~-l~~~gi~~~~ 324 (386)
T 1cs1_A 263 VKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSF-ELDG----DEQTLRRF-LGGLSLFTLA 324 (386)
T ss_dssp HHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEE-EESS----CHHHHHHH-HHTCSSSEEB
T ss_pred HHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEE-EECC----CHHHHHHH-HHhCCcceEc
Confidence 77776652 2111 1 12565544 3422 23445544 4677998874
No 188
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.93 E-value=4.8e-25 Score=213.18 Aligned_cols=186 Identities=19% Similarity=0.214 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEEcCC
Q 013883 150 EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCITLRP 225 (434)
Q Consensus 150 ~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~ 225 (434)
+|+++++++++ .+ + .+++++| ++++..++.+++++||+|++++|+|+++...+ ...|++++.++.
T Consensus 2 ~l~~~la~~~g------~~-~-~i~~~sG-~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-- 70 (331)
T 1pff_A 2 ALEGKIAKLEH------AE-A-CAATASG-MGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-- 70 (331)
T ss_dssp HHHHHHHHHHT------CS-E-EEEESSH-HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT--
T ss_pred hHHHHHHHHhC------CC-e-EEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC--
Confidence 68889999886 22 3 5666666 89999999999999999999999999987765 458999998876
Q ss_pred CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHH-cCcEEEEcCcCCccccCCCCccccCCCCCCC
Q 013883 226 PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE-NDVLVFSDEVYDKLAFEMDHISIASLPGMYE 304 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~-~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~ 304 (434)
.|++.+++++++++++|++++|+||||.+++ +++|.++|++ +|+++|+||+|..+.+.. .+ ..+
T Consensus 71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~---~~-----~~~ 135 (331)
T 1pff_A 71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN---PL-----DLG 135 (331)
T ss_dssp ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC---GG-----GGT
T ss_pred ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC---hh-----hcC
Confidence 3788999999989999999999999999995 7789999999 999999999998765421 11 135
Q ss_pred ceEEEccCChhhccccce-eeeEEeCh-hhHHHHHHHhhc-cccCCchHHHHHHHHHHhC
Q 013883 305 RTVTMNSLGKTFSLTGWK-IGWAIAPP-HLTWGVRQAHSF-LTFATSTPMQWAATAALRA 361 (434)
Q Consensus 305 ~~i~i~S~SK~~g~~G~R-~G~~~~~~-~~~~~l~~~~~~-~~~~~~~~~q~a~~~~L~~ 361 (434)
+++++.|++|.++.+|.| +||+++++ ++++.++..... ...+.+.+.++++...++.
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 195 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT 195 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH
T ss_pred CcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch
Confidence 679999999999989999 89999998 888888776654 4556777777777666653
No 189
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.93 E-value=1e-24 Score=214.57 Aligned_cols=277 Identities=15% Similarity=0.139 Sum_probs=197.2
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-cCCCCeEEEcCC
Q 013883 124 PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL-INPGDEVILFAP 202 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~Vlv~~p 202 (434)
++.+.+++.+.+... .|.+..+..++|++++++++ .+ ++++++|+++++..++.++ +++||+|+++.|
T Consensus 16 ~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~-~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~ 84 (373)
T 3frk_A 16 EYEIKFKFEEIYKRN--WFILGDEDKKFEQEFADYCN--------VN-YCIGCGNGLDALHLILKGYDIGFGDEVIVPSN 84 (373)
T ss_dssp HHHHHHHHHHHHHHT--CCSSSHHHHHHHHHHHHHHT--------SS-EEEEESCHHHHHHHHHHHTTCCTTCEEEEETT
T ss_pred CHHHHHHHHHHHHCC--CccCCchHHHHHHHHHHHhC--------CC-eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCC
Confidence 456677777776654 46666678899999999987 34 7899999999999999999 899999999999
Q ss_pred CchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 203 FYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 203 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
+|..+...+...|++++.++.+++++.+|++.+++++++++++|+ |+||||...+ +++|.++|+++|+++|+|+
T Consensus 85 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~D~ 158 (373)
T 3frk_A 85 TFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEKTKAII---AVHLYGQPAD---MDEIKRIAKKYNLKLIEDA 158 (373)
T ss_dssp SCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---HHHHHHHHHHHTCEEEEEC
T ss_pred CcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---HHHHHHHHHHcCCEEEEEC
Confidence 999999999999999999999876789999999999998888887 7889999875 6678999999999999999
Q ss_pred cCCccc-cCCCCccccCCCCCCCceEEEccCC--hhhccccceeeeEEeC-hhhHHHHHHHhhcc------------ccC
Q 013883 283 VYDKLA-FEMDHISIASLPGMYERTVTMNSLG--KTFSLTGWKIGWAIAP-PHLTWGVRQAHSFL------------TFA 346 (434)
Q Consensus 283 ay~~~~-~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~~~~~-~~~~~~l~~~~~~~------------~~~ 346 (434)
+|..+. +++. ....+ . .+.+.||+ |.++..| +.|+++++ +++.+.++...... ++.
T Consensus 159 a~~~g~~~~~~--~~~~~---~--d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~ 230 (373)
T 3frk_A 159 AQAHGSLYKGM--KVGSL---G--DAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSR 230 (373)
T ss_dssp TTCTTCEETTE--ETTSS---S--SEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCC
T ss_pred CcccCCEECCE--ecccc---c--cEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCC
Confidence 998643 2222 11111 1 37788877 8887224 47888886 45777776655421 122
Q ss_pred CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeec-CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCe
Q 013883 347 TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFP-SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGV 425 (434)
Q Consensus 347 ~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV 425 (434)
.+.....+....++ .+++..++.+++.+.+.+.|+++++.+.. +.+....|..+. ....+..++.++|.++ ||
T Consensus 231 ~~~~~aa~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~-gI 304 (373)
T 3frk_A 231 LDELQAGFLRVKLK----YLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFV-IRSEKRDELQKYLNNN-GI 304 (373)
T ss_dssp CCHHHHHHHHHHHH----THHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEE-EEESSHHHHHHHHHHT-TB
T ss_pred CCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEE-EEeCCHHHHHHHHHHC-CC
Confidence 23333333333333 24556677777888888888887744321 122211111110 0011467888888655 99
Q ss_pred EEECCC
Q 013883 426 VAIPTS 431 (434)
Q Consensus 426 ~v~pG~ 431 (434)
.+.++.
T Consensus 305 ~v~~~~ 310 (373)
T 3frk_A 305 GTLIHY 310 (373)
T ss_dssp CCBCSC
T ss_pred CcccCc
Confidence 998764
No 190
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.93 E-value=1.1e-23 Score=210.28 Aligned_cols=271 Identities=20% Similarity=0.226 Sum_probs=188.3
Q ss_pred CCCCcHHHHHHHHHHHHcCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeE
Q 013883 120 NFDGPDFVKDAAIQAIRDGKNQYARG--HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEV 197 (434)
Q Consensus 120 ~~~~~~~v~~~~~~~~~~~~~~Y~~~--~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~V 197 (434)
+++.++.+.+.+. ....+.|... ....++++.++++++ .+ ++++++|+++++..++.+++++||+|
T Consensus 31 ~~~~~~~~~~~~~---~~~~~~y~~~~~~~~~~l~~~la~~~g--------~~-~~~~~~~gt~a~~~al~~l~~~gd~v 98 (412)
T 2cb1_A 31 GFKTLEEGQERFA---TGEGYVYARQKDPTAKALEERLKALEG--------AL-EAVVLASGQAATFAALLALLRPGDEV 98 (412)
T ss_dssp CCSSHHHHHHHHH---HCCSCSBTTTCCHHHHHHHHHHHHHHT--------CS-EEEEESSHHHHHHHHHHTTCCTTCEE
T ss_pred ecCChHHHHHHhc---cccCcCcCCCCChHHHHHHHHHHHHhC--------CC-cEEEECCHHHHHHHHHHHHhCCCCEE
Confidence 3555666665543 3344667654 345678888888775 34 79999999999999999999999999
Q ss_pred EEcCCCchhHHHHH----HHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHH
Q 013883 198 ILFAPFYDSYEATL----SMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE 273 (434)
Q Consensus 198 lv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~ 273 (434)
+++.|.|..+...+ ...|++++.++.+ ++.+++++++++++|++++|+||||.+++ +++|+++|++
T Consensus 99 i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~ 168 (412)
T 2cb1_A 99 VAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE-------PEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEE 168 (412)
T ss_dssp EEETTCCHHHHHHHHHTTTTTTCEEEEECSS-------HHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred EEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------HHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHH
Confidence 99999999866553 4479999888653 89999999999999999999999999985 7789999999
Q ss_pred cCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeCh-----------------------
Q 013883 274 NDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP----------------------- 330 (434)
Q Consensus 274 ~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~----------------------- 330 (434)
||+++|+||+|..+.+... .. ..+.++++.|++|.++.+|.|+|++++.+
T Consensus 169 ~~~~li~D~~~~~~~~~~~--~~-----~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (412)
T 2cb1_A 169 AGVALVVDNTFGAAGALCR--PL-----AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE 241 (412)
T ss_dssp HTCEEEEECGGGTTTTSCC--GG-----GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred cCCEEEEECCCccccccCC--cc-----ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence 9999999999987622111 11 12467899999999988999999988644
Q ss_pred -----hhHHHHHHHh-hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEee--c--------
Q 013883 331 -----HLTWGVRQAH-SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVF--P-------- 393 (434)
Q Consensus 331 -----~~~~~l~~~~-~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~-------- 393 (434)
++.+.++... .......++...+++...++. ++...++..++.+.+.+.|.+. ++..+ +
T Consensus 242 ~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~ 317 (412)
T 2cb1_A 242 ALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET----VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAH 317 (412)
T ss_dssp HHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTH
T ss_pred ccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccH
Confidence 2333333322 111222334444444444432 3344455667788888888875 66633 2
Q ss_pred --------CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 394 --------SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 394 --------~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
..+++ +.+.+ . +.+++ .+++++.||.+ .|+
T Consensus 318 ~~~~~~~~~~~~i-v~~~~-~----~~~~~-~~~l~~~~i~~-~~s 355 (412)
T 2cb1_A 318 RNARKYLASGGPI-LTLDL-G----DLERA-SRFLGAIRLLK-AAN 355 (412)
T ss_dssp HHHHHHCSSSCSE-EEEEC-S----SHHHH-HHHHHHCSSEE-CSC
T ss_pred HHHHHhCCCCceE-EEEEe-C----CHHHH-HHHHHhCCeee-ecc
Confidence 12343 34444 2 34444 44556779999 775
No 191
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.93 E-value=3.4e-24 Score=212.30 Aligned_cols=246 Identities=16% Similarity=0.210 Sum_probs=181.1
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH----HHHcCCEEEEEE
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LSMAGAKIKCIT 222 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~ 222 (434)
...+|++.++++++ .+ +.++++++++++..++.+++++||+|++++|.|+++... ++..|++++.++
T Consensus 60 ~~~~l~~~la~~~g--------~~-~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 130 (389)
T 3acz_A 60 TVEQFEEMVCSIEG--------AA-GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLID 130 (389)
T ss_dssp HHHHHHHHHHHHHT--------CS-EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHhC--------CC-eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence 34578888888775 22 355555667999999999999999999999999987665 577999999987
Q ss_pred cCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC
Q 013883 223 LRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM 302 (434)
Q Consensus 223 ~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~ 302 (434)
.. |++.+++++++++++|++++|+||||.+++ +++|+++|++||+++|+|++|..+.+. . .+.
T Consensus 131 ~~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~-~--~~~----- 193 (389)
T 3acz_A 131 TS------DVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL-K--PLE----- 193 (389)
T ss_dssp TT------CHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC-C--GGG-----
T ss_pred CC------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc-C--ccc-----
Confidence 63 799999999999999999999999999996 678999999999999999999876532 1 111
Q ss_pred CCceEEEccCChhhcccccee-eeEEeCh-hhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 303 YERTVTMNSLGKTFSLTGWKI-GWAIAPP-HLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 303 ~~~~i~i~S~SK~~g~~G~R~-G~~~~~~-~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
.+.++++.|++|.++.+|.|+ ||+++++ ++++.++........+.+...++++...|+... ...++..++...+
T Consensus 194 ~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~----~r~~~~~~~~~~l 269 (389)
T 3acz_A 194 LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKTLP----IRMQIHMENGLKV 269 (389)
T ss_dssp TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHH----HHHHHHHHHHHHH
T ss_pred cCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccHHH----HHHHHHHHHHHHH
Confidence 245689999999999899998 9999998 898888776654455566677777777776532 2233344455555
Q ss_pred HHHhhhCC---------------CEee----cCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 381 VEGLNAVG---------------FKVF----PSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 381 ~~~L~~~g---------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
.+.|++.+ +.+. ...++++. +.+. . .+.+.+++++.||.+.+
T Consensus 270 ~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~-~~l~-----~-~~~~~~~l~~~~i~~~~ 330 (389)
T 3acz_A 270 AKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFL-FEMK-----S-FEAAKKLMEHLKVCTLA 330 (389)
T ss_dssp HHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEE-EEES-----S-HHHHHHHHTTCSSSEEB
T ss_pred HHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEE-EEEC-----C-HHHHHHHHHhCCCcEEC
Confidence 55555431 1111 11255544 4442 1 33455566778998887
No 192
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.93 E-value=2.8e-24 Score=213.16 Aligned_cols=253 Identities=17% Similarity=0.149 Sum_probs=188.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~ 223 (434)
..+|++.++++++ .+ ++++++|+++++..++.+++++||+|+++.|.|+++...+ ...|.+++.++.
T Consensus 68 ~~~l~~~la~~~g--------~~-~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 138 (392)
T 3qhx_A 68 RTALEAALAAVED--------AA-FGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVAL 138 (392)
T ss_dssp HHHHHHHHHHHTT--------CS-EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred HHHHHHHHHHHhC--------CC-cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCC
Confidence 4567777777664 33 6888888899999999999999999999999999887766 668999999886
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
+ |++.+++++++++++|++++|+||||.+.+ +++|+++|++||+++|+|++|..+... .. . ..
T Consensus 139 ~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~-~~--~-----~~ 201 (392)
T 3qhx_A 139 A------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQ-QP--L-----SL 201 (392)
T ss_dssp T------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC-CG--G-----GG
T ss_pred C------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccC-Ch--H-----Hh
Confidence 5 799999999999999999999999999985 778999999999999999999864321 11 1 12
Q ss_pred CceEEEccCChhhcccc-ceeeeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTG-WKIGWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILV 381 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G-~R~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~ 381 (434)
+.++++.|++|.+|.+| .|+||++++ +++.+.++........+.++..++++...|+. +....++..++.+.+.
T Consensus 202 ~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~~~~~~~~~~~~l~ 277 (392)
T 3qhx_A 202 GADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT----LVLRMQRHSENAAAVA 277 (392)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHHHHHH
Confidence 34588999999999766 799999998 68888888777666777888888888887775 3334455666777777
Q ss_pred HHhhhC-CCE-eecC-----------------CeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCCCC
Q 013883 382 EGLNAV-GFK-VFPS-----------------SGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVF 433 (434)
Q Consensus 382 ~~L~~~-g~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~~F 433 (434)
+.|++. ++. +..+ .|+ ++++.+.. +......+...| +..|+.+..|+.+
T Consensus 278 ~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~-~~~~~l~~-~~~~~~~~~~~l-~~~~~~~s~G~~~ 345 (392)
T 3qhx_A 278 EFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGG-MVSVRMRA-GRTAAEQLCAKT-NIFILAESLGSVE 345 (392)
T ss_dssp HHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCS-EEEEEETT-CHHHHHHHHHHC-SSSEECSCCCCSS
T ss_pred HHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCce-EEEEEeCC-cHHHHHHHHHhC-CCceECCCCCCCC
Confidence 777765 332 2111 134 45566532 111233454444 4457888777654
No 193
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.92 E-value=1.4e-25 Score=226.59 Aligned_cols=302 Identities=13% Similarity=0.074 Sum_probs=202.7
Q ss_pred CeeEeCCCC--CCCC-CcHHHH-H-HHHH---HHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 110 GAINLGQGF--PNFD-GPDFVK-D-AAIQ---AIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 110 ~~i~l~~g~--p~~~-~~~~v~-~-~~~~---~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
..+||..|. .++. .+|.+. + ++.+ ++.+.. .|.+ .+..+.+.++++.+.+..+. .+++ +|++++|+++
T Consensus 55 ~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~-~~~~-~~~~~~~~~la~~la~~~~~-~~~~-~v~~~~~gse 130 (449)
T 2cjg_A 55 RYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNK-PSNS-DVYSVAMARFVETFARVLGD-PALP-HLFFVEGGAL 130 (449)
T ss_dssp EEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCC-CCTT-TCCCHHHHHHHHHHHHHHCC-TTCC-EEEEESSHHH
T ss_pred EEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcC-CCCc-ccCCHHHHHHHHHHHHhcCC-CCCC-EEEEeCchHH
Confidence 467886653 2333 378888 8 8888 776543 3442 23345556666666665552 3456 8999999999
Q ss_pred HHHHHHHHcc---C----------C-CCeEEEcCCCchhHHHHHHH-c--------C-----CEEEEEEcCC--CCC---
Q 013883 182 AIAATILGLI---N----------P-GDEVILFAPFYDSYEATLSM-A--------G-----AKIKCITLRP--PDF--- 228 (434)
Q Consensus 182 ai~~~~~~l~---~----------~-gd~Vlv~~p~y~~~~~~~~~-~--------G-----~~~~~v~~~~--~~~--- 228 (434)
|+..+++.+. . + ||+|++.+|.|+++...... . + .+++.+|+++ ...
T Consensus 131 A~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 210 (449)
T 2cjg_A 131 AVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAM 210 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhcccc
Confidence 9999987543 2 2 89999999999875442211 1 1 1455555542 110
Q ss_pred ----CCCHHHHHhhcc---cCCcEEEecCCCCCcc-cCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCC
Q 013883 229 ----AIPIEELKSTIS---KNTRAILMNTPHNPTG-KMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLP 300 (434)
Q Consensus 229 ----~~d~~~l~~~i~---~~~~~i~~~~p~NPTG-~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~ 300 (434)
..+++.|+++++ +++++|+++.++|||| .+++.+++++|.++|++||+++|+||+|.++.+.|.......+.
T Consensus 211 ~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~ 290 (449)
T 2cjg_A 211 AALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLD 290 (449)
T ss_dssp HHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHT
T ss_pred chhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccC
Confidence 135666888885 4667776665579999 58899999999999999999999999999887665432222221
Q ss_pred CCCCceEEEccCChhhccccceeeeEEeChhhHHHHH-----HHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHH
Q 013883 301 GMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVR-----QAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSA 375 (434)
Q Consensus 301 ~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~-----~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~ 375 (434)
. ..+ +.||||.+ |+||+++++++++.+. ......+++.+.+.+.++.++|+..++ +++.+++++
T Consensus 291 ~-~~d---i~t~sK~l-----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~--~~~~~~~~~ 359 (449)
T 2cjg_A 291 V-APD---IVAFGKKT-----QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA--EGLFERAVQ 359 (449)
T ss_dssp C-CCS---EEEECGGG-----SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH--HTHHHHHHH
T ss_pred C-Cce---EEEecCcc-----cEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHH
Confidence 1 122 34799987 7999999998876522 122335678889999999998874322 345677777
Q ss_pred HHHHHHHHhhhC-----C-CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 376 KKAILVEGLNAV-----G-FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 376 ~~~~l~~~L~~~-----g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+++++++.|+++ + +...++.|.|+ ++++... .+..+++++|++ +||.+.||
T Consensus 360 ~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~-~~~~~~~--~~~~~~~~~l~~-~Gv~v~~~ 416 (449)
T 2cjg_A 360 HGKYLRARLDELAADFPAVVLDPRGRGLMC-AFSLPTT--ADRDELIRQLWQ-RAVIVLPA 416 (449)
T ss_dssp HHHHHHHHHHHHHHHSTTTSEEEEEETTEE-EEECSSH--HHHHHHHHHHHH-TTEECEEE
T ss_pred HHHHHHHHHHHHHhhCCCceeeEeeccEEE-EEEECCh--HHHHHHHHHHHH-CCeEEecC
Confidence 888888877653 2 54556666655 4566321 125678888886 59999986
No 194
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.92 E-value=8.6e-24 Score=208.52 Aligned_cols=285 Identities=13% Similarity=0.024 Sum_probs=200.5
Q ss_pred eCCCCCCCCCcHHHHHHHHHHHHcCCCC-CCCCCCcHHHHHHH-HHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc-
Q 013883 114 LGQGFPNFDGPDFVKDAAIQAIRDGKNQ-YARGHGVPEFNSAI-ASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL- 190 (434)
Q Consensus 114 l~~g~p~~~~~~~v~~~~~~~~~~~~~~-Y~~~~G~~~lr~~i-a~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l- 190 (434)
+..+.|++++++.+.+++.+++..+... |.+ ...+|++++ +++++ . .+ ++++++|+++++.+++.++
T Consensus 5 i~~~~p~~~~~~~i~~a~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~g------~-~~-~~v~~~sgt~al~~al~~l~ 74 (377)
T 3ju7_A 5 IPFLRASTVPVIEYLDELKEIDASHIYTNYGP--INQRFEQTIMSGFFQ------N-RG-AVTTVANATLGLMAAIQLKK 74 (377)
T ss_dssp BCSCCCCCCCGGGGHHHHHHHHHHTCCSSSCH--HHHHHHHHHHHHTST------T-CS-EEEEESCHHHHHHHHHHHHS
T ss_pred eeccCCCCCCcHHHHHHHHHHHHcCCcccCCH--HHHHHHHHHHHHHhC------C-CC-eEEEeCCHHHHHHHHHHHcC
Confidence 3346899999999999999998876432 232 467888888 88765 1 33 6888899999999999998
Q ss_pred cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc-ccC--CcEEEecCCCCCcccCCCHHHHHHH
Q 013883 191 INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI-SKN--TRAILMNTPHNPTGKMFTREELNVI 267 (434)
Q Consensus 191 ~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i-~~~--~~~i~~~~p~NPTG~~~~~e~l~~i 267 (434)
+++||+|+++.|+|..+...+...|++++.++++++++.+|++.+++++ +++ +++|+ |+||+|...+ +++|
T Consensus 75 ~~~Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i 148 (377)
T 3ju7_A 75 RKKGKYALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEY 148 (377)
T ss_dssp CTTCCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHH
T ss_pred CCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHH
Confidence 8999999999999999999999999999999998768999999999988 566 88876 6789999875 5668
Q ss_pred HHHHHHcCcEEEEcCcCCcccc-CCCCccc-cCCCCCCCceEEEccC--ChhhccccceeeeEEeC-hhhHHHHHHHhhc
Q 013883 268 ASLCIENDVLVFSDEVYDKLAF-EMDHISI-ASLPGMYERTVTMNSL--GKTFSLTGWKIGWAIAP-PHLTWGVRQAHSF 342 (434)
Q Consensus 268 ~~la~~~~~~iI~Deay~~~~~-~~~~~~~-~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~~~~~-~~~~~~l~~~~~~ 342 (434)
.++|+ ||+++|+|++|..... .+. .+ ..+ .+ +.+.|| +|.++ +| +.|+++.+ +++.++++..+..
T Consensus 149 ~~la~-~~~~vi~D~a~a~g~~~~~~--~~g~~~---~d--~~~~S~~~~K~l~-~g-~gG~~~~~~~~l~~~~~~~~~~ 218 (377)
T 3ju7_A 149 EELEK-KGVPVVVDAAPGFGLMNGGM--HYGQDF---SG--MIIYSFHATKPFG-IG-EGGLIYSKNEEDIQRIKRMGNF 218 (377)
T ss_dssp HHHHH-TTCCBEEECTTCTTCEETTE--ETTTTC---SS--EEEEECBTTSSSC-CB-SCEEEEESCHHHHHHHHHHTBT
T ss_pred HHHHh-cCCEEEEECCCccCCeECCE--eccCCC---Cc--EEEEECCCCCcCC-CC-CcEEEEECCHHHHHHHHHHHhc
Confidence 88899 9999999999986432 211 11 111 12 445554 69998 45 67877765 6777777776542
Q ss_pred c------------ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC---CEeecCCe--eEE--Eeee
Q 013883 343 L------------TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG---FKVFPSSG--TYF--VVVD 403 (434)
Q Consensus 343 ~------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---~~~~~~~~--~~~--~~~~ 403 (434)
. .+..+.+.+.++...|+. ++...++.+++++.+.+.|++++ +.+.+..+ .++ +.+.
T Consensus 219 g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~----l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T 3ju7_A 219 GFDTNRECTMMGFNCKMSEYAAAIGIATMKK----WDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPIL 294 (377)
T ss_dssp TBCTTSCBCSSCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEE
T ss_pred CCCCCCceeeccccCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEE
Confidence 2 344555555555555654 44455556666667777777664 33332222 121 1222
Q ss_pred cCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 404 HTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 404 ~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+. +..+.+++.++|. ++||.+..+.
T Consensus 295 ~~--~~~~~~~l~~~L~-~~gI~~~~~~ 319 (377)
T 3ju7_A 295 CP--EEVRNKQVIEDLK-KQKIEARLYF 319 (377)
T ss_dssp CC--TTSCHHHHHHHHH-TTTBCCBCTT
T ss_pred eC--ChhhHHHHHHHHH-HCCCceeccc
Confidence 22 1113667887775 4599987764
No 195
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.92 E-value=2.4e-24 Score=214.05 Aligned_cols=255 Identities=16% Similarity=0.168 Sum_probs=187.0
Q ss_pred CCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE---cCChHHHHHHHHHHccCCCCeEEEcC-CCchhHHHH------
Q 013883 141 QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV---TSGCTEAIAATILGLINPGDEVILFA-PFYDSYEAT------ 210 (434)
Q Consensus 141 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~---t~G~~~ai~~~~~~l~~~gd~Vlv~~-p~y~~~~~~------ 210 (434)
.|+.. |..+|++.++++++ .+ ..++ ++|+++|+..++.+++++||+|++++ |.|..+...
T Consensus 55 ~y~~~-~~~~Le~~lA~l~g--------~e-~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~ 124 (409)
T 3jzl_A 55 GYDDE-GRDTLERVYATVFK--------TE-AALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQ 124 (409)
T ss_dssp CTTCH-HHHHHHHHHHHHHT--------CS-EEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSS
T ss_pred CCChh-HHHHHHHHHHHHhC--------CC-cEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccc
Confidence 44443 45678888888776 34 3444 88889999999999999999999998 999998854
Q ss_pred ----HHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecC----CCCCcccCCCHHHHHHHHHHHHH--cCcEEEE
Q 013883 211 ----LSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNT----PHNPTGKMFTREELNVIASLCIE--NDVLVFS 280 (434)
Q Consensus 211 ----~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~----p~NPTG~~~~~e~l~~i~~la~~--~~~~iI~ 280 (434)
++..|++++.++.++ ++.+|++.+++++++++++|++++ |+||||.+ .++++|+++|++ ||+++|+
T Consensus 125 ~~~~l~~~G~~~~~v~~~~-~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v---~~l~~I~~la~~~~~~~~liv 200 (409)
T 3jzl_A 125 GQGSLKDFHIGYSSVPLLE-NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI---EKIKEMIVFVKNINPEVIVFV 200 (409)
T ss_dssp SSSCTGGGTCEEEECCCCT-TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH---HHHHHHHHHHHHHCTTCEEEE
T ss_pred hhhHHHHcCCEEEEeCCCC-CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc---ccHHHHHHHHHhhCCCCEEEE
Confidence 456799999998875 688999999999999999999999 99999966 478999999999 9999999
Q ss_pred cCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc-ceeeeEEeChhhHHHHHHHhhccc----cCCchHHHHHH
Q 013883 281 DEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAHSFLT----FATSTPMQWAA 355 (434)
Q Consensus 281 Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~~~~~~----~~~~~~~q~a~ 355 (434)
|++|..+.+..+... .+..++++|++|.+|.+| .+.||++++++++++++....... .++....++++
T Consensus 201 D~a~~~~~~~~~p~~-------~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~ 273 (409)
T 3jzl_A 201 DNCYGEFVEYQEPPE-------VGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEM 273 (409)
T ss_dssp ECTTCTTTSSCCSGG-------GTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHH
T ss_pred eCCcccccccCCccc-------cCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHH
Confidence 999988764322211 234589999999998554 346999999999998887543211 22222113444
Q ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCee----EEEeeecCCCCCCCHHHHHHHHHHh
Q 013883 356 TAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGT----YFVVVDHTPFGHETDIAFCEYLIKE 422 (434)
Q Consensus 356 ~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Ll~~ 422 (434)
...|. .+...+++..+++..+.+.|+++|+++.+.... ..+.+.+. +.+...+|++.|.+.
T Consensus 274 l~gl~----~~~~r~~~~~~~a~~la~~L~~~g~~v~p~~~~~~~~~i~~i~l~--~~~~~~~~~~~L~~~ 338 (409)
T 3jzl_A 274 YQGFF----LAPHVTAQAIKGARFTAAMLAEFGVEADPVWDAPRTDLIQSVSFH--NKEKMVAFAQAIQAA 338 (409)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCCEEECS--CHHHHHHHHHHHHHT
T ss_pred HHHHh----hHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCccEEEEEEeC--CHHHHHHHHHHHHhc
Confidence 44443 345567778889999999999999988654322 13334442 112345677777543
No 196
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.92 E-value=4.8e-24 Score=211.66 Aligned_cols=290 Identities=15% Similarity=0.069 Sum_probs=196.2
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc--CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE-cCChHHHHHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD--GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV-TSGCTEAIAAT 186 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~-t~G~~~ai~~~ 186 (434)
+.++|+.|. .+.++.+.+++.+.... +...+.+ ...++.+++.+.+.+.+|.+ +++ +|++ |+|+++++.++
T Consensus 40 ~~~~~~~~~--~~~~~~v~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~-~i~~~t~g~t~al~~~ 113 (398)
T 2fyf_A 40 RDGRFGSGP--SKVRLEQLQTLTTTAAALFGTSHRQA--PVKNLVGRVRSGLAELFSLP-DGY-EVILGNGGATAFWDAA 113 (398)
T ss_dssp SSCBCCSSS--CCCCHHHHHGGGTTTTTTTTSCTTSH--HHHHHHHHHHHHHHHHTTCC-TTC-EEEEEETCHHHHHHHH
T ss_pred CCccccCCC--CCCCHHHHHHHhhcCCCccCcCcCCH--HHHHHHHHHHHHHHHHhCCC-CCc-eEEEeCCchhHHHHHH
Confidence 567777552 24567777766552101 1111211 12344555666666666654 345 7988 99999999999
Q ss_pred HHHccCCCCeEEEcCCCchh-HHHHHHHc--CCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHH
Q 013883 187 ILGLINPGDEVILFAPFYDS-YEATLSMA--GAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREE 263 (434)
Q Consensus 187 ~~~l~~~gd~Vlv~~p~y~~-~~~~~~~~--G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~ 263 (434)
+.+++++| .+++..+.|.. ....+... |++++.++.++ +...+. .+++++++|++++|+||||.+++.++
T Consensus 114 ~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-g~~~~~-----~i~~~~~~v~~~~~~nptG~~~~~~~ 186 (398)
T 2fyf_A 114 AFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDP-GSAPEP-----QTDPSVDVIAWAHNETSTGVAVAVRR 186 (398)
T ss_dssp HHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCT-TCCCCC-----CCCTTCSEEEEESEETTTTEECCCCC
T ss_pred HHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecCC-CCCCCc-----cccCCCCEEEEeCcCCCcceecchHH
Confidence 99999887 22333333321 12245555 88888898872 333332 25678999999999999999998777
Q ss_pred HHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHh---
Q 013883 264 LNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAH--- 340 (434)
Q Consensus 264 l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~--- 340 (434)
+.++ +|+++|+|++|..+... ..+. +..+++.|++|.+|.+| ++||+++++++++.++...
T Consensus 187 i~~~------~~~~vivD~a~~~~~~~---~~~~------~~di~~~s~sK~~~~~g-g~g~l~~~~~~~~~l~~~~~~~ 250 (398)
T 2fyf_A 187 PEGS------DDALVVIDATSGAGGLP---VDIA------ETDAYYFAPQKNFASDG-GLWLAIMSPAALSRIEAIAATG 250 (398)
T ss_dssp CTTC------C-CEEEEECTTTTTTSC---CCGG------GCSEEEECTTSTTCSCS-SEEEEEECHHHHHHHHHHHHTT
T ss_pred hhhh------cCCeEEEEeccccCCcc---cCcc------cCcEEEEecCcccCCCC-ceEEEEECHHHHHHhhcccccC
Confidence 6554 89999999999875321 1111 23478899999999775 6999999999988775431
Q ss_pred ------------------hccccCCchHHHHHHHHHHhCChHH--HHHHHHHHHHHHHHHHHHhhhC-CCEeec--C--C
Q 013883 341 ------------------SFLTFATSTPMQWAATAALRAPETY--YEELKRDYSAKKAILVEGLNAV-GFKVFP--S--S 395 (434)
Q Consensus 341 ------------------~~~~~~~~~~~q~a~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~--~ 395 (434)
.....+++...+.++..+|+...+. +++++++++++++.+.+.|+++ |+++.. + .
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~ 330 (398)
T 2fyf_A 251 RWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLR 330 (398)
T ss_dssp CCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGB
T ss_pred CCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhc
Confidence 1222455666677777777653333 7788899999999999999988 888763 3 3
Q ss_pred eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 396 GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+++++|+.++. +. +..+++++|.++ ||.+.||.
T Consensus 331 ~~~~~~~~~~~-~~-~~~~l~~~L~~~-gI~v~~g~ 363 (398)
T 2fyf_A 331 SQVVGTIDFVD-DV-DAGTVAKILRAN-GIVDTEPY 363 (398)
T ss_dssp CSSEEEEEECT-TS-CHHHHHHHHHHT-TCBCCSCC
T ss_pred CCcEEEEECCC-CC-CHHHHHHHHHHC-CcEEecCc
Confidence 56577887742 32 577899988776 99999873
No 197
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.92 E-value=3e-24 Score=214.96 Aligned_cols=257 Identities=17% Similarity=0.194 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcC-CCchhHHHHH----------HHcCCEE
Q 013883 150 EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFA-PFYDSYEATL----------SMAGAKI 218 (434)
Q Consensus 150 ~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~-p~y~~~~~~~----------~~~G~~~ 218 (434)
..++++.+.+.+.+|.+.... +++++ ++++|+..++.+++++||+|++++ |.|..+...+ +..|+++
T Consensus 65 ~~~~~l~~~la~~~g~~~~~~-~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~ 142 (431)
T 3ht4_A 65 IGRDTLEKVYADVFGAEAGLV-RPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGY 142 (431)
T ss_dssp HHHHHHHHHHHHHTTCSEECC-BTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEE
T ss_pred hhHHHHHHHHHHHhCCCcccc-cceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEE
Confidence 346666666766666543222 33355 568999999999999999999998 9999988665 3479999
Q ss_pred EEEEcCCCCCCCCHHHHHhhcccCCcEEEec-CCCCCcccCCCHHHHHHHHHHHHH--cCcEEEEcCcCCccccCCCCcc
Q 013883 219 KCITLRPPDFAIPIEELKSTISKNTRAILMN-TPHNPTGKMFTREELNVIASLCIE--NDVLVFSDEVYDKLAFEMDHIS 295 (434)
Q Consensus 219 ~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~-~p~NPTG~~~~~e~l~~i~~la~~--~~~~iI~Deay~~~~~~~~~~~ 295 (434)
+.++.++ ++.+|++.+++++++++++|+++ +||||+|...+.+++++|+++|++ +|+++|+||+|..+.++.+...
T Consensus 143 ~~v~~~~-~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~ 221 (431)
T 3ht4_A 143 NAVPLTE-GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCH 221 (431)
T ss_dssp EECCBCT-TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGG
T ss_pred EEeCCCC-CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCccc
Confidence 9999875 58899999999999999999998 599999999999999999999999 9999999999999876433221
Q ss_pred ccCCCCCCCceEEEccCChhhcc-ccceeeeEEeChhhHHHHHHHhhccccC----CchHHHHHHHHHHhCChHHHHHHH
Q 013883 296 IASLPGMYERTVTMNSLGKTFSL-TGWKIGWAIAPPHLTWGVRQAHSFLTFA----TSTPMQWAATAALRAPETYYEELK 370 (434)
Q Consensus 296 ~~~~~~~~~~~i~i~S~SK~~g~-~G~R~G~~~~~~~~~~~l~~~~~~~~~~----~~~~~q~a~~~~L~~~~~~~~~~~ 370 (434)
+ +..+++.|++|.+|. .+...||+++++++++.++.......++ ++....+++...|. .+...+
T Consensus 222 ---~----g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~----~~~~~~ 290 (431)
T 3ht4_A 222 ---V----GADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFF----LAPHVA 290 (431)
T ss_dssp ---T----TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHH----HHHHHH
T ss_pred ---c----CCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhh----hHHHHH
Confidence 1 234899999999762 1244599999999999887755432221 11111333333333 345566
Q ss_pred HHHHHHHHHHHHHhhhCCCEeecCCe----eEEEeeecCCCCCCCHHHHHHHHHHh
Q 013883 371 RDYSAKKAILVEGLNAVGFKVFPSSG----TYFVVVDHTPFGHETDIAFCEYLIKE 422 (434)
Q Consensus 371 ~~~~~~~~~l~~~L~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Ll~~ 422 (434)
++..++.+.+.+.|+++|+++.+... +..+.+.+. +.+...++++.|.+.
T Consensus 291 ~~~~~~a~~l~~~L~~~g~~v~p~~~~~~~~li~~i~l~--~~~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 291 GQALKGAIFTAAFLEKLGMNTSPAWNAPRTDLIQSVQFD--DKDRMIAFCQAIQYA 344 (431)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEESCTTSCCSSSCCEEECC--CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCcCEecCCCCCCCccEEEEEEeC--CHHHHHHHHHHHHhc
Confidence 77888899999999999988765422 223334442 111244677777553
No 198
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.92 E-value=4e-24 Score=213.20 Aligned_cols=253 Identities=18% Similarity=0.207 Sum_probs=184.3
Q ss_pred CCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE---cCChHHHHHHHHHHccCCCCeEEEcC-CCchhHHH-------
Q 013883 141 QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTV---TSGCTEAIAATILGLINPGDEVILFA-PFYDSYEA------- 209 (434)
Q Consensus 141 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~---t~G~~~ai~~~~~~l~~~gd~Vlv~~-p~y~~~~~------- 209 (434)
.|+.. |..+|++.++++++ .+ ..++ ++|+++|+..++.++++|||+|++++ |.|..+..
T Consensus 70 ~Y~~~-g~~~Le~~lA~l~g--------~e-~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~ 139 (427)
T 3hvy_A 70 GYNDI-GRDSLDRVYANIFN--------TE-SAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDS 139 (427)
T ss_dssp CTTCH-HHHHHHHHHHHHHT--------CS-EEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTT
T ss_pred CCCch-hHHHHHHHHHHHhC--------CC-ceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccc
Confidence 45443 56778888888776 34 4455 78889999999999999999999999 99998773
Q ss_pred ----HHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc--cCCcEEEecC----CCCCcccCCCHHHHHHHHHHHHH--cCcE
Q 013883 210 ----TLSMAGAKIKCITLRPPDFAIPIEELKSTIS--KNTRAILMNT----PHNPTGKMFTREELNVIASLCIE--NDVL 277 (434)
Q Consensus 210 ----~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~--~~~~~i~~~~----p~NPTG~~~~~e~l~~i~~la~~--~~~~ 277 (434)
.+...|++++.++. +++.+|++.++++++ +++|+|++++ |+||||.+ .++++|+++|++ +|++
T Consensus 140 ~~~~~l~~~G~~~~~v~~--~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v---~dl~~i~~ia~~~~~g~~ 214 (427)
T 3hvy_A 140 KKVGSLREYGVKYKMVDL--KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRI---AEIAEIIKSIREVNENVI 214 (427)
T ss_dssp CCSCCTGGGTCEEEECCC--BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCH---HHHHHHHHHHHHHCSSSE
T ss_pred hhhhHHHHcCCEEEEecC--CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccH---HHHHHHHHHHHHhCCCCE
Confidence 34567999999988 378899999999998 7899999998 99999865 589999999999 8999
Q ss_pred EEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc-ceeeeEEeChhhHHHHHHHhhccccC--C-chHH-H
Q 013883 278 VFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAHSFLTFA--T-STPM-Q 352 (434)
Q Consensus 278 iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~~~~~~~~--~-~~~~-q 352 (434)
+|+|++|..+.+...... .+..++++|++|.+|..| .+.||++++++++++++........+ . +.+. .
T Consensus 215 livD~a~~~~~~~~~p~~-------~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a 287 (427)
T 3hvy_A 215 VFVDNCYGEFVEEKEPTD-------VGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVM 287 (427)
T ss_dssp EEEECTTCTTTSSSCGGG-------GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCH
T ss_pred EEEECCccccccCCCCcc-------cCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHH
Confidence 999999988764332211 134589999999998444 56799999999999988754322221 1 1122 3
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCee----EEEeeecCCCCCCCHHHHHHHHHH
Q 013883 353 WAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGT----YFVVVDHTPFGHETDIAFCEYLIK 421 (434)
Q Consensus 353 ~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Ll~ 421 (434)
+.+...|. .+...+++..++...+.+.|+++|+++.+.... .++.+.+. +.+...+|++.|..
T Consensus 288 ~~~~~gl~----~~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~li~~~~l~--~~~~~~~f~~~l~~ 354 (427)
T 3hvy_A 288 RSLYEGLF----MAPHVTIEAVKGAVFCARIMELAGFDVLPKYNDKRTDIIQAIKFN--DEKKLIDFIKGIQT 354 (427)
T ss_dssp HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSEEEEECS--SHHHHHHHHHHHHH
T ss_pred HHHHHhHh----HHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCceEEEEEeCC--CHHHHHHHHHHhcc
Confidence 33433333 345567778889999999999999988765332 13344442 11123456666643
No 199
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.92 E-value=5.2e-23 Score=206.87 Aligned_cols=286 Identities=15% Similarity=0.130 Sum_probs=199.6
Q ss_pred eeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc
Q 013883 111 AINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL 190 (434)
Q Consensus 111 ~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l 190 (434)
.|+|+ .|++ .+.+.+++.+++.+. .|.+..+..+++++++++++ .+ ++++++++++++..++.++
T Consensus 33 ~i~~~--~~~~--~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~g--------~~-~~i~~~sGt~a~~~al~~l 97 (437)
T 3bb8_A 33 VVPPS--GKVI--GTKELQLMVEASLDG--WLTTGRFNDAFEKKLGEYLG--------VP-YVLTTTSGSSANLLALTAL 97 (437)
T ss_dssp CBCSC--CCCC--CHHHHHHHHHHHHHC--CCBSCHHHHHHHHHHHHHHT--------CS-EEEEESCHHHHHHHHHHHT
T ss_pred cccCC--CCCC--CHHHHHHHHHHHHcC--CcCCChHHHHHHHHHHHHHC--------CC-cEEEeCCHHHHHHHHHHHh
Confidence 45653 3333 457778888887653 35555678899999999986 23 4667777789999999998
Q ss_pred ---------cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecC-CCCCcccCCC
Q 013883 191 ---------INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNT-PHNPTGKMFT 260 (434)
Q Consensus 191 ---------~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~-p~NPTG~~~~ 260 (434)
+++||+|+++.|+|+.+...+...|++++.++.+++++.+|++.+++++++++++|++++ |+|| .
T Consensus 98 ~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~g~~----~- 172 (437)
T 3bb8_A 98 TSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDKTKAIMIAHTLGNL----F- 172 (437)
T ss_dssp TCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCTTEEEEEEECGGGCC----C-
T ss_pred hhcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCCCCeEEEEeCCCCCh----h-
Confidence 789999999999999999999999999999988765788999999999998899998863 5555 3
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHH-HHHH
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG-VRQA 339 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~-l~~~ 339 (434)
++++|.++|+++|+++|+|++|...... +...+..+ . .+++.||+|..+++|.|+|+++++++.+.. ++..
T Consensus 173 --~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~~~~---~--d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~ 244 (437)
T 3bb8_A 173 --DLAEVRRVADKYNLWLIEDCCDALGSTY-DGKMAGTF---G--DIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESF 244 (437)
T ss_dssp --CHHHHHHHHHHHTCEEEEECTTCTTCEE-TTEETTSS---S--SEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHH
T ss_pred --cHHHHHHHHHHcCCEEEEECccccCceE-CCeecccc---c--CEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHH
Confidence 5788999999999999999999853321 11111111 1 267789998888899999999998665443 3322
Q ss_pred hhcc---------------------------------------ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 340 HSFL---------------------------------------TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 340 ~~~~---------------------------------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
.... .+..+.+.+.++...|+. +++..++.+++++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~----~~~~~~~~~~~~~~l 320 (437)
T 3bb8_A 245 RDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER----IEEFVEKRKANFKYL 320 (437)
T ss_dssp HBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred HHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 1110 011234444445555543 234445557778888
Q ss_pred HHHhhhC-CCEeecCC--------eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 381 VEGLNAV-GFKVFPSS--------GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 381 ~~~L~~~-g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
.+.|+++ |+.+.+.. ..+.+.++.. .+. +..++.++|.+ +||.+.++.
T Consensus 321 ~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~l~~~L~~-~GI~v~~~~ 377 (437)
T 3bb8_A 321 KDALQSCADFIELPEATENSDPSWFGFPITLKED-SGV-SRIDLVKFLDE-AKVGTRLLF 377 (437)
T ss_dssp HHHGGGGTTTEECCCCCTTEECCCSSEEEEECGG-GSS-CHHHHHHHHHH-TTBCCBCCT
T ss_pred HHHhhccCCccccCCCCCCCceeeEEEEEEECCc-CcC-cHHHHHHHHHH-CCCceeccC
Confidence 8999887 76655421 1223334331 122 46788888865 499998874
No 200
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.92 E-value=4.2e-24 Score=211.95 Aligned_cols=209 Identities=16% Similarity=0.188 Sum_probs=161.3
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH----HHHHcCCEEEEEE
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA----TLSMAGAKIKCIT 222 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~ 222 (434)
+..+||++++++++ .++.+++++| ++++.+++. ++++||+|+++.|.|++... .++..|++++.++
T Consensus 56 ~~~~lr~~la~~~g--------~~~~i~~~sG-t~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 125 (393)
T 1n8p_A 56 NRENLERAVAALEN--------AQYGLAFSSG-SATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN 125 (393)
T ss_dssp HHHHHHHHHHHHTT--------CSEEEEESCH-HHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred hHHHHHHHHHHHhC--------CCcEEEECCh-HHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence 45688999888875 2224555555 899999999 99999999999999996544 3456799998887
Q ss_pred cCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc----CcEEEEcCcCCccccCCCCccccC
Q 013883 223 LRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN----DVLVFSDEVYDKLAFEMDHISIAS 298 (434)
Q Consensus 223 ~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~----~~~iI~Deay~~~~~~~~~~~~~~ 298 (434)
.+ | +.+++++++++++|++++|+||||.+++ +++|+++|+++ |+++|+|++|..+.+. + ...
T Consensus 126 ~~------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~---~~~ 191 (393)
T 1n8p_A 126 DL------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS-N---PLN 191 (393)
T ss_dssp SH------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-C---GGG
T ss_pred CC------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC-C---HHH
Confidence 65 7 8999999989999999999999999996 77799999999 9999999999987653 1 111
Q ss_pred CCCCCCceEEEccCChhhcccccee-eeEEeC-hhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 013883 299 LPGMYERTVTMNSLGKTFSLTGWKI-GWAIAP-PHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAK 376 (434)
Q Consensus 299 ~~~~~~~~i~i~S~SK~~g~~G~R~-G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~ 376 (434)
+ +.++++.|++|.+|.+|+|+ ||++++ +++++.+.........+.+...+.++...++. +....++..++
T Consensus 192 ~----~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----~~~~~~~~~~~ 263 (393)
T 1n8p_A 192 F----GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT----LHLRVRQAALS 263 (393)
T ss_dssp G----TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHH
T ss_pred c----CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccch----HHHHHHHHHHH
Confidence 2 45699999999999899999 999985 78888887765544445556666666666664 33344555666
Q ss_pred HHHHHHHhhhC
Q 013883 377 KAILVEGLNAV 387 (434)
Q Consensus 377 ~~~l~~~L~~~ 387 (434)
++.+.+.|++.
T Consensus 264 ~~~l~~~L~~~ 274 (393)
T 1n8p_A 264 ANKIAEFLAAD 274 (393)
T ss_dssp HHHHHHHHTSC
T ss_pred HHHHHHHHHhC
Confidence 67777777665
No 201
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.92 E-value=1.7e-23 Score=210.23 Aligned_cols=211 Identities=16% Similarity=0.218 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH----HHHcCCEEEEEEcC
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LSMAGAKIKCITLR 224 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~~ 224 (434)
.+|++.++++++ . ++ .|++++|+ +++..++.+++++||+|+++.|.|+++... +...|++++.++.+
T Consensus 117 ~~l~~~lA~l~g------~-~~-~v~~~sG~-~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 187 (445)
T 1qgn_A 117 VVLEEKISALEG------A-ES-TLLMASGM-CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA 187 (445)
T ss_dssp HHHHHHHHHHHT------C-SE-EEEESCHH-HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS
T ss_pred HHHHHHHHHHhC------C-Cc-EEEeCCHH-HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 477777777765 2 23 67777665 999999999999999999999999987764 45689999998764
Q ss_pred CCCCCCCHHHHHhhcccCC-cEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 225 PPDFAIPIEELKSTISKNT-RAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 225 ~~~~~~d~~~l~~~i~~~~-~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
|++.+++++++++ ++|++++|+||||.+.+ +++|+++|++||+++|+|++|...... . . + ..
T Consensus 188 ------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~-~--~---~--~~ 250 (445)
T 1qgn_A 188 ------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ-K--A---L--AL 250 (445)
T ss_dssp ------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC-C--T---T--TT
T ss_pred ------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-C--c---c--cc
Confidence 7999999999999 99999999999999986 667999999999999999999864321 1 1 1 12
Q ss_pred CceEEEccCChhhcccc-ceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVE 382 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~ 382 (434)
+..+++.|++|.+|..| .++||+++++++++.+...........+....+++...|+. +....+++.++++.+.+
T Consensus 251 g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~----l~~r~~~~~~~a~~l~~ 326 (445)
T 1qgn_A 251 GADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAE 326 (445)
T ss_dssp TCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHH
Confidence 34588999999998444 37999999999988887655433333455554555455543 34445566667788888
Q ss_pred HhhhC-CC
Q 013883 383 GLNAV-GF 389 (434)
Q Consensus 383 ~L~~~-g~ 389 (434)
.|++. ++
T Consensus 327 ~L~~~p~v 334 (445)
T 1qgn_A 327 ILEAHPKV 334 (445)
T ss_dssp HHHTCTTE
T ss_pred HHhcCCCc
Confidence 88876 44
No 202
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.91 E-value=4.5e-24 Score=212.84 Aligned_cols=249 Identities=15% Similarity=0.203 Sum_probs=182.8
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEE---cCChHHHHHHHHHHccCCCCeEEEcC-CCchhHHHH-----------H
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTV---TSGCTEAIAATILGLINPGDEVILFA-PFYDSYEAT-----------L 211 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~---t~G~~~ai~~~~~~l~~~gd~Vlv~~-p~y~~~~~~-----------~ 211 (434)
|..+|++.++++++ .+ ..++ ++|+++++..++.++++|||+|++++ |.|..+... +
T Consensus 74 ~~~~Le~~lA~l~g--------~e-~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l 144 (427)
T 3i16_A 74 GRDSLDAVYARVFN--------TE-SALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSL 144 (427)
T ss_dssp HHHHHHHHHHHHHT--------CS-EEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCT
T ss_pred HHHHHHHHHHHHhC--------Cc-ceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHH
Confidence 55678888888776 33 3345 78889999999999999999999999 999988744 4
Q ss_pred HHcCCEEEEEEcCCCCCCCCHHHHHhhcc--cCCcEEEecC----CCCCcccCCCHHHHHHHHHHHHH--cCcEEEEcCc
Q 013883 212 SMAGAKIKCITLRPPDFAIPIEELKSTIS--KNTRAILMNT----PHNPTGKMFTREELNVIASLCIE--NDVLVFSDEV 283 (434)
Q Consensus 212 ~~~G~~~~~v~~~~~~~~~d~~~l~~~i~--~~~~~i~~~~----p~NPTG~~~~~e~l~~i~~la~~--~~~~iI~Dea 283 (434)
...|++++.++.++ ++.+|++.++++++ +++++|++++ |+||||.+ +++++|+++|++ +|+++|+|++
T Consensus 145 ~~~G~~~~~v~~~~-~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i---~dl~~i~~la~~~~~g~~livD~a 220 (427)
T 3i16_A 145 KEFGINYKQVDLKE-DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLI---EDIKSIVDCVKNIRKDIICFVDNC 220 (427)
T ss_dssp GGGTCEEEECCCCT-TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCH---HHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHcCCEEEEecCcc-CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccH---HHHHHHHHHHHHhCCCCEEEEECC
Confidence 56799999998864 57799999999998 7899999998 99999865 589999999999 9999999999
Q ss_pred CCccccCCCCccccCCCCCCCceEEEccCChhhcccc-ceeeeEEeChhhHHHHHHHhhccccCC--ch-HH-HHHHHHH
Q 013883 284 YDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAHSFLTFAT--ST-PM-QWAATAA 358 (434)
Q Consensus 284 y~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~~~~~~~~~--~~-~~-q~a~~~~ 358 (434)
|..+.+...... .+..++++|++|.+|.+| .+.||++++++++++++.......++. .. .. .+.+...
T Consensus 221 ~~~~~~~~~p~~-------~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~g 293 (427)
T 3i16_A 221 YGEFMDTKEPTD-------VGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQG 293 (427)
T ss_dssp TTTTSSSSCGGG-------GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHH
T ss_pred CccccccCCccc-------cCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHHH
Confidence 998764322211 234589999999998545 678999999999998887543222221 11 21 2333333
Q ss_pred HhCChHHHHHHHHHHHHHHHHHHHHhhhCCCEeecCCee----EEEeeecCCCCCCCHHHHHHHHHH
Q 013883 359 LRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGT----YFVVVDHTPFGHETDIAFCEYLIK 421 (434)
Q Consensus 359 L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Ll~ 421 (434)
|. .+...+++..+++..+.+.|+++|+++.+.... .++.+.+. +.+...+|++.|..
T Consensus 294 l~----~~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~~i~~i~l~--~~~~~~~f~~~l~~ 354 (427)
T 3i16_A 294 LF----LAPHISMEALKGAILCSRIMELAGFEVMPKYDEKRSDIIQSIKFN--DKDKLIEFCKGIQT 354 (427)
T ss_dssp HH----HHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCEEEECS--SHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCccEEEEEEEC--CHHHHHHHHHHHhh
Confidence 32 345667888889999999999999988765332 13334432 11124467776654
No 203
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.91 E-value=1.5e-23 Score=212.49 Aligned_cols=297 Identities=15% Similarity=0.125 Sum_probs=199.4
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHc----CCC----CCCCC-CCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRD----GKN----QYARG-HGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~----~~~----~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
+.+.|..+..+. .++.+.+++.+++.. +.. .|.+. .-..++++.++++++ .+++ +|++++|++
T Consensus 67 ~~iyld~~~~g~-~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~-~v~~t~g~t 138 (465)
T 3e9k_A 67 NAIYFLGNSLGL-QPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVG------ANEK-EIALMNALT 138 (465)
T ss_dssp BCEECBTTTSCC-EETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHT------CCGG-GEEECSCHH
T ss_pred CeEEecCCccCC-ChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcC------CCcC-CEEEECCHH
Confidence 567777664442 344454445444322 111 12221 122456777777665 4466 899999999
Q ss_pred HHHHHHHHHccCCCCe---EEEcCCCchhHHH----HHHHcCCEEE----EEEcCCCCCCCCHHHHHhhcc---cCCcEE
Q 013883 181 EAIAATILGLINPGDE---VILFAPFYDSYEA----TLSMAGAKIK----CITLRPPDFAIPIEELKSTIS---KNTRAI 246 (434)
Q Consensus 181 ~ai~~~~~~l~~~gd~---Vlv~~p~y~~~~~----~~~~~G~~~~----~v~~~~~~~~~d~~~l~~~i~---~~~~~i 246 (434)
+++.+++.+++++||. |+++.|.|++... .++..|+++. .+...++++.+|+++++++++ +++++|
T Consensus 139 ~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv 218 (465)
T 3e9k_A 139 VNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVI 218 (465)
T ss_dssp HHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEE
T ss_pred HHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEE
Confidence 9999999999877655 9999999998444 5667898752 222222467889999999996 578999
Q ss_pred EecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeE
Q 013883 247 LMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWA 326 (434)
Q Consensus 247 ~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~ 326 (434)
++++||||||.+++ +++|.++|++||+++|+|++|..... ...+.. .+..+++.|++|.++....++|++
T Consensus 219 ~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~---~~~~~~----~~~D~~~~s~~K~l~~gp~~~g~l 288 (465)
T 3e9k_A 219 LFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGNV---ELYLHD----WGVDFACWCSYKYLNAGAGGIAGA 288 (465)
T ss_dssp EEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS---CCCHHH----HTCCEEEECSSSTTCCCTTCCCEE
T ss_pred EEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCCc---CCchhh----cCCCEEEECcccccccCCCceEEE
Confidence 99999999999996 56788999999999999999875321 111111 134588899999993122368999
Q ss_pred EeChhhHHHHHHHh-------------------------hccccCCchHHHHHHHHHHhCChHH-HHHHHHHHHHHHHHH
Q 013883 327 IAPPHLTWGVRQAH-------------------------SFLTFATSTPMQWAATAALRAPETY-YEELKRDYSAKKAIL 380 (434)
Q Consensus 327 ~~~~~~~~~l~~~~-------------------------~~~~~~~~~~~q~a~~~~L~~~~~~-~~~~~~~~~~~~~~l 380 (434)
++++++++.+.... ++...+++.....++.++|+..+++ +++++++++++++++
T Consensus 289 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l 368 (465)
T 3e9k_A 289 FIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYL 368 (465)
T ss_dssp EECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 99988765432110 0011245555566666666643333 788889999999999
Q ss_pred HHHhhh-----------CCCEeecCC----eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 381 VEGLNA-----------VGFKVFPSS----GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 381 ~~~L~~-----------~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
.+.|++ .|+++..+. .+.++++.+.. +..+++++|.++ ||.+..
T Consensus 369 ~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~----~~~~l~~~L~~~-Gi~v~~ 427 (465)
T 3e9k_A 369 EYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV----PNKDVFQELEKR-GVVCDK 427 (465)
T ss_dssp HHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC----TTCCHHHHHHTT-TEECEE
T ss_pred HHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC----CHHHHHHHHHHC-CEEEec
Confidence 999987 688887765 23345555531 345788888655 998763
No 204
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.90 E-value=8.4e-23 Score=208.87 Aligned_cols=296 Identities=14% Similarity=0.101 Sum_probs=208.2
Q ss_pred CCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEE---EcCChHHHHHHHHHHccCC----
Q 013883 121 FDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVT---VTSGCTEAIAATILGLINP---- 193 (434)
Q Consensus 121 ~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~---~t~G~~~ai~~~~~~l~~~---- 193 (434)
..+++.+.+++.+++......|....+..++++.+.+++.+.+|.+.+++ +++ +++|+++++.+++.++..+
T Consensus 66 ~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~-~~~~g~~t~ggtea~~~a~~a~~~~~~~~ 144 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEA-ETAVGVGTVGSSEAIMLAGLAFKRKWQNK 144 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSS-CCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccc-cCCcceecCcHHHHHHHHHHHHHHHHhHH
Confidence 34567788888777765444444444567888899999999999875455 343 4899999999998887655
Q ss_pred ----CC-----eEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHH
Q 013883 194 ----GD-----EVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREEL 264 (434)
Q Consensus 194 ----gd-----~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l 264 (434)
|| +|+++.++|..+...+..+|++++.||++++++.+|++.+++++++++++|++++|+||||.+.+ +
T Consensus 145 ~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l 221 (502)
T 3hbx_A 145 RKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFED---V 221 (502)
T ss_dssp HHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCC---H
T ss_pred HHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccC---H
Confidence 76 89999999999999999999999999998655899999999999999999999999999999975 5
Q ss_pred HHHHHHHHHc------CcEEEEcCcCCcccc---CCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeC-hhhHH
Q 013883 265 NVIASLCIEN------DVLVFSDEVYDKLAF---EMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTW 334 (434)
Q Consensus 265 ~~i~~la~~~------~~~iI~Deay~~~~~---~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~-~~~~~ 334 (434)
++|.++|+++ |+++++|++|.++.. .+.... .+. ...-.++..+.+|.++ .+.++||++.. ++.+.
T Consensus 222 ~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~--~~~-~~~~D~v~~s~hK~l~-~p~g~G~~~~~~~~~l~ 297 (502)
T 3hbx_A 222 KLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEW--DFR-LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLP 297 (502)
T ss_dssp HHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCC--STT-STTEEEEEEETTTTTC-CCSSCEEEEESSGGGSC
T ss_pred HHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccc--ccC-CCCceEEEECcccccC-CCCCeEEEEEeCHHHhh
Confidence 6688889988 999999999987642 221111 111 1234566778899775 67789988875 33331
Q ss_pred H-HHHHhhcc---------ccCC---chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhCC-CEeecC--CeeE
Q 013883 335 G-VRQAHSFL---------TFAT---STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG-FKVFPS--SGTY 398 (434)
Q Consensus 335 ~-l~~~~~~~---------~~~~---~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~~ 398 (434)
. +.....+. .++. ....++++...+. .+.+++..++..++++++.+.|++++ +++..+ ..++
T Consensus 298 ~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~ 375 (502)
T 3hbx_A 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--HEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPL 375 (502)
T ss_dssp GGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSE
T ss_pred HHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceE
Confidence 1 10000110 0111 2233444444443 33467778888889999999999985 888765 4554
Q ss_pred EEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 399 FVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
+.+.+......+..++.++|.+ .||.+.
T Consensus 376 -v~f~~~~~~~~~~~~l~~~L~~-~Gi~v~ 403 (502)
T 3hbx_A 376 -VAFSLKDSSCHTEFEISDMLRR-YGWIVP 403 (502)
T ss_dssp -EEEEESSCSSCCHHHHHHHHHT-TTCBCC
T ss_pred -EEEEecCCCcCCHHHHHHHHHh-CCcEEe
Confidence 4455533211245688888865 599753
No 205
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.90 E-value=1.8e-21 Score=192.52 Aligned_cols=286 Identities=15% Similarity=0.144 Sum_probs=197.0
Q ss_pred eeEeCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc
Q 013883 111 AINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL 190 (434)
Q Consensus 111 ~i~l~~g~p~~~~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l 190 (434)
.+++..+.+. .++.+.+++.+++.+. .|.+..+..+++++++++++ .+ ++++++++++++..++.++
T Consensus 3 ~~~~~~~~~~--~~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~-~~i~~~sGt~a~~~al~~~ 69 (390)
T 3b8x_A 3 MINYPLASST--WDDLEYKAIQSVLDSK--MFTMGEYVKQYETQFAKTFG--------SK-YAVMVSSGSTANLLMIAAL 69 (390)
T ss_dssp --CBCSCCCC--CCHHHHHHHHHHHHHT--CCSSCHHHHHHHHHHHHHHT--------CS-EEEEESCHHHHHHHHHHHT
T ss_pred ceeccCCCCC--CCHHHHHHHHHHHHcC--CCCCChHHHHHHHHHHHHHC--------CC-cEEEECCHHHHHHHHHHHH
Confidence 3444444332 3567778888887763 45566678899999999986 22 4666666678999999998
Q ss_pred -------cCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHH
Q 013883 191 -------INPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREE 263 (434)
Q Consensus 191 -------~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~ 263 (434)
+++||+|+++.|+|+.+...+...|++++.++.+++++.+|++.+++++++++++|++++ ++|... +
T Consensus 70 ~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~---~ 143 (390)
T 3b8x_A 70 FFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTVN---LLGNPN---N 143 (390)
T ss_dssp TSSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEEC---GGGCCC---C
T ss_pred HhhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcCCeEEEEEC---CccChh---h
Confidence 789999999999999999999999999999999875689999999999998899998863 456544 5
Q ss_pred HHHHHHHHHHcCcEEEEcCcCCccc-cCCCCccccCCCCCCCceEEEc--cCChhhccccceeeeEEeCh-hhHHHHHHH
Q 013883 264 LNVIASLCIENDVLVFSDEVYDKLA-FEMDHISIASLPGMYERTVTMN--SLGKTFSLTGWKIGWAIAPP-HLTWGVRQA 339 (434)
Q Consensus 264 l~~i~~la~~~~~~iI~Deay~~~~-~~~~~~~~~~~~~~~~~~i~i~--S~SK~~g~~G~R~G~~~~~~-~~~~~l~~~ 339 (434)
+++|.++|++||+++|+|++|.... +++. .+.... ++... ..+|.++ +| +.|++++++ ++.+.++..
T Consensus 144 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~~-----~~g~~~--~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~~~ 214 (390)
T 3b8x_A 144 FDEINKIIGGRDIILLEDNCESMGATFNNK-----CAGTFG--LMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILLCI 214 (390)
T ss_dssp HHHHHHHHTTSCCEEEEECTTCTTCEETTE-----ETTSSS--SEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECcCcccCEECCc-----cccccc--ceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHHHH
Confidence 7889999999999999999998532 2211 111111 12222 2345554 33 459999886 666666654
Q ss_pred hhcc-------------------------------ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-
Q 013883 340 HSFL-------------------------------TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV- 387 (434)
Q Consensus 340 ~~~~-------------------------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 387 (434)
.... .+..+.....++...| +++++..++.+++++.+.+.|+++
T Consensus 215 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l----~~l~~~~~~~~~~~~~l~~~L~~~~ 290 (390)
T 3b8x_A 215 RAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL----KKLPRFISVRRKNAEYFLDKFKDHP 290 (390)
T ss_dssp TBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3211 0113444444444444 456777888888999999999886
Q ss_pred CCEeecC--CeeEE-EeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 388 GFKVFPS--SGTYF-VVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 388 g~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
|+.+..+ ..+++ +++.+......+..++.++|.+ +||.+.+
T Consensus 291 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~-~gI~v~~ 334 (390)
T 3b8x_A 291 YLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNS-AGIECRP 334 (390)
T ss_dssp SEEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHHHH-TTBCCBC
T ss_pred CcccCCCCCCcccEEEEEEecCcCcccHHHHHHHHHH-CCCCeee
Confidence 7776543 23432 3444432111246788888855 5999987
No 206
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.90 E-value=1.1e-22 Score=203.62 Aligned_cols=254 Identities=15% Similarity=0.130 Sum_probs=171.8
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH----HHHHcCCEEEEEE
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA----TLSMAGAKIKCIT 222 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~ 222 (434)
...+|++.++++++ .+ ..++++++++|+.+++.+++++||+|++++|.|.++.. .+...|++++.++
T Consensus 83 ~~~~le~~lA~l~g--------~~-~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~ 153 (430)
T 3ri6_A 83 TVEDLEQRLKNLTG--------AL-GVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVD 153 (430)
T ss_dssp HHHHHHHHHHHHHT--------CS-EEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHC--------CC-cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence 34567777777765 23 34555566799999999999999999999999999877 6678999999998
Q ss_pred cCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC
Q 013883 223 LRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM 302 (434)
Q Consensus 223 ~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~ 302 (434)
.+ |++.+++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|....+. ... .
T Consensus 154 ~~------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~----~~~----~ 216 (430)
T 3ri6_A 154 VM------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL----EAK----R 216 (430)
T ss_dssp TT------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC----CGG----G
T ss_pred CC------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----ChH----H
Confidence 66 799999999999999999999999999985 667999999999999999999864321 111 1
Q ss_pred CCceEEEccCChhhccccceee-eEEe--Chhh------------------HHHHHH-HhhccccCCchHHHHHHHHHHh
Q 013883 303 YERTVTMNSLGKTFSLTGWKIG-WAIA--PPHL------------------TWGVRQ-AHSFLTFATSTPMQWAATAALR 360 (434)
Q Consensus 303 ~~~~i~i~S~SK~~g~~G~R~G-~~~~--~~~~------------------~~~l~~-~~~~~~~~~~~~~q~a~~~~L~ 360 (434)
.+.++++.|++|.++.+|..+| +++. +..+ +..++. .........+....+.+...|
T Consensus 217 ~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l- 295 (430)
T 3ri6_A 217 LGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGL- 295 (430)
T ss_dssp GTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH-
T ss_pred cCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhh-
Confidence 2345899999999985655554 4442 2222 222221 111122233333333333333
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhC-CCE-eecCC----------------eeEEEeeecCCCCCCCHHHHHHHHHHh
Q 013883 361 APETYYEELKRDYSAKKAILVEGLNAV-GFK-VFPSS----------------GTYFVVVDHTPFGHETDIAFCEYLIKE 422 (434)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 422 (434)
+.+....++..++...+.+.|++. ++. +.-|. |++++++.+. +.....+|.+.| +.
T Consensus 296 ---~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~--~~~~~~~~~~~l-~~ 369 (430)
T 3ri6_A 296 ---ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELE--SKEASYRFMDAL-KL 369 (430)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--SHHHHHHHHHHC-SS
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEEC--CHHHHHHHHHhC-Cc
Confidence 234555566778888888888875 454 33333 6656777774 211233444444 33
Q ss_pred cCeEEECCCCC
Q 013883 423 VGVVAIPTSVF 433 (434)
Q Consensus 423 ~GV~v~pG~~F 433 (434)
.++.+.+|..|
T Consensus 370 ~~~~~s~G~~~ 380 (430)
T 3ri6_A 370 IRRATNIHDNK 380 (430)
T ss_dssp SEECSCCSCSS
T ss_pred ceecCCCCCCC
Confidence 46677777654
No 207
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.90 E-value=1.4e-22 Score=205.28 Aligned_cols=306 Identities=15% Similarity=0.118 Sum_probs=189.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcCC-CCCCCC---CC---cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHH
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDGK-NQYARG---HG---VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEA 182 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~~-~~Y~~~---~G---~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~a 182 (434)
+.|+|-.+ |++ .++.|++++...+.+.. .+|+.. .| ..+|++...+.+.+.+|.+.+.-...++++++++|
T Consensus 55 ~~i~lias-~n~-~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~A 132 (490)
T 2a7v_A 55 RGLELIAS-ENF-CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPA 132 (490)
T ss_dssp HSEECCTT-CCC-CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHH
T ss_pred cCceEECC-CCC-CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHH
Confidence 45666543 333 57888888877665432 233321 12 23667555667776676542100013445577999
Q ss_pred HHHHHHHccCCCCeEEEcCCCchhHHH--------HHHHcCCEEEEE--EcCCCCCCCCHHHHHhhccc-CCcEEEecCC
Q 013883 183 IAATILGLINPGDEVILFAPFYDSYEA--------TLSMAGAKIKCI--TLRPPDFAIPIEELKSTISK-NTRAILMNTP 251 (434)
Q Consensus 183 i~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~G~~~~~v--~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p 251 (434)
+..++.++++|||+|++.++.|.++.. .+...|..+..+ +++++++.+|++.+++++.. ++++|+++.+
T Consensus 133 n~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s 212 (490)
T 2a7v_A 133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS 212 (490)
T ss_dssp HHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCC
Confidence 999999999999999999998876431 233456544444 44555789999999999864 7899998889
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCC-ccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeCh
Q 013883 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYD-KLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP 330 (434)
Q Consensus 252 ~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~-~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~ 330 (434)
+||+. . ++++|.++|++||+++++|+++. ++.+.+..... +. ...+++.|++|+++ |+|.|++++++
T Consensus 213 ~~~~~--~---dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~--~~---~aDiv~~S~hK~l~--Gp~GG~i~~~~ 280 (490)
T 2a7v_A 213 AYARL--I---DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSP--FK---HADIVTTTTHKTLR--GARSGLIFYRK 280 (490)
T ss_dssp SCCSC--C---CHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCG--GG---TCSEEEEESSGGGC--SCSCEEEEEEC
T ss_pred CCCCc--c---cHHHHHHHHHHcCCEEEEccccccccccCCcCCCC--CC---CCCEEEECCcccCc--cccchheeecc
Confidence 98853 3 47889999999999999999975 44433322211 11 23478899999984 78889999976
Q ss_pred h---------------hHHHHHHHhhccccC-CchHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhhCCCEeec
Q 013883 331 H---------------LTWGVRQAHSFLTFA-TSTPMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNAVGFKVFP 393 (434)
Q Consensus 331 ~---------------~~~~l~~~~~~~~~~-~~~~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 393 (434)
+ +.+.++........+ ++.....++..++... .+..++..+++.++++++.+.|.+.|+++..
T Consensus 281 ~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~G~~v~~ 360 (490)
T 2a7v_A 281 GVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVS 360 (490)
T ss_dssp SEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGG
T ss_pred chhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCcEEec
Confidence 4 556666554333333 3333333444455432 2234777888899999999999999999875
Q ss_pred -CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 394 -SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 394 -~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
...++++|+++.+.+. +..++.+ ++++.||.+.++.
T Consensus 361 ~~t~t~lv~vdl~~~g~-~~~~~~~-~L~~~GI~v~~~~ 397 (490)
T 2a7v_A 361 GGTDNHLVLVDLRPKGL-DGARAER-VLELVSITANKNT 397 (490)
T ss_dssp GSCSSSEEEEECTTTTC-CHHHHHH-HHHHTTEECEEEC
T ss_pred CCCCCeEEEEEeCCCCC-CHHHHHH-HHHhCCeEEecCc
Confidence 3456788898866554 4555555 4567799998543
No 208
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.84 E-value=1.1e-25 Score=226.86 Aligned_cols=299 Identities=17% Similarity=0.138 Sum_probs=200.4
Q ss_pred cCCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 108 KHGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+...|||..|.-. +. .+|.+.+++.+++.++. ..|. .....+|.+.+++++. ..+ .+++++++++|+
T Consensus 99 G~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~-~~~~~~Lae~L~~~~p-------~~~-~v~~~nSGseA~ 169 (465)
T 2yky_A 99 GHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQ-TENEALFAEAVCDRFP-------SID-LVRFTNSGTEAN 169 (465)
Confidence 4467888777431 22 36788888888877642 2332 2233456666666542 135 799999999999
Q ss_pred HHHHHHcc--CCCCeEEEcCCCchhHHHHHH----HcCC--EEEEEEcCCCCCCCCHHHHHhhcc---cCCcEEEecCCC
Q 013883 184 AATILGLI--NPGDEVILFAPFYDSYEATLS----MAGA--KIKCITLRPPDFAIPIEELKSTIS---KNTRAILMNTPH 252 (434)
Q Consensus 184 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~----~~G~--~~~~v~~~~~~~~~d~~~l~~~i~---~~~~~i~~~~p~ 252 (434)
..+++.+. ..+|+|++.+++|+++...+. ..|. .++.+|+ -|++.++++++ +++++|+++..+
T Consensus 170 ~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~------~d~~~l~~~l~~~~~~~aavi~epv~ 243 (465)
T 2yky_A 170 LMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY------NDVEGTADLLKRHGHDCAAILVEPML 243 (465)
Confidence 99988753 455899999999988765433 1233 2233332 27889999887 577888876556
Q ss_pred CCcccCC-CHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh
Q 013883 253 NPTGKMF-TREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH 331 (434)
Q Consensus 253 NPTG~~~-~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~ 331 (434)
|++|.++ +.+.+++|.++|++||+++|+||+|. +.. +.......+ +....+.||||.+| .|+|+||++++++
T Consensus 244 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~~~a~~~~----gv~pDi~t~sK~lg-~G~piG~v~~~~~ 316 (465)
T 2yky_A 244 GAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SGGGAQEML----GISADLTTLGKYIG-GGMSFGAFGGRRD 316 (465)
Confidence 7799654 67789999999999999999999999 743 222122111 12233569999999 5999999999999
Q ss_pred hHHHHHH-----HhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC----CCEeecCCeeEEEee
Q 013883 332 LTWGVRQ-----AHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV----GFKVFPSSGTYFVVV 402 (434)
Q Consensus 332 ~~~~l~~-----~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~ 402 (434)
+++.+.. .....+++.+++++.++.++|+..++ +.+.++++++.+.+++.|+++ ++....+..|.++++
T Consensus 317 i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i 394 (465)
T 2yky_A 317 LMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT--RQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTI 394 (465)
Confidence 9988876 23446788899999999888875322 234556666666666666553 332223344545566
Q ss_pred ecCCCC-----------CCCHHHHHHHHHHhcCeEEECCC
Q 013883 403 DHTPFG-----------HETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 403 ~~~~~~-----------~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
.+.... .+....++++|++ .||++.|+.
T Consensus 395 ~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~-~GV~v~p~~ 433 (465)
T 2yky_A 395 HFSRAPIRSAGDVRAADQQLKELFFFHMLR-KGIYLAPRG 433 (465)
Confidence 553200 0114568888876 499999975
No 209
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.90 E-value=2.5e-22 Score=200.23 Aligned_cols=210 Identities=14% Similarity=0.160 Sum_probs=159.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~ 223 (434)
..+|++.++++++ .+ ++++++|+++++.+++.+++++||+|+++.|.|++....+ +..|+++..++.
T Consensus 84 ~~~le~~lA~l~g--------~~-~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 154 (415)
T 2fq6_A 84 HFSLQQAMCELEG--------GA-GCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP 154 (415)
T ss_dssp HHHHHHHHHHHHT--------CS-EEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred HHHHHHHHHHHhC--------CC-eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC
Confidence 3467788877765 23 4666788899999999999999999999999999877654 457999988865
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHH--cCcEEEEcCcCCccccCCCCccccCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE--NDVLVFSDEVYDKLAFEMDHISIASLPG 301 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~--~~~~iI~Deay~~~~~~~~~~~~~~~~~ 301 (434)
+ |++++++++++++++|++++|+||||.+++ +++|+++|++ +|+++|+|++|...... . ++ .
T Consensus 155 ~------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~-~--p~-~--- 218 (415)
T 2fq6_A 155 L------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF-K--AL-D--- 218 (415)
T ss_dssp T------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS-C--GG-G---
T ss_pred C------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC-C--cc-c---
Confidence 4 789999999999999999999999999995 6779999999 99999999999864321 1 11 1
Q ss_pred CCCceEEEccCChhhccccce-eeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 302 MYERTVTMNSLGKTFSLTGWK-IGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 302 ~~~~~i~i~S~SK~~g~~G~R-~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
.+.++++.|++|.+|.+|.+ +||+++++++++.++..........+....+++...|+ .+....++..++...+
T Consensus 219 -~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~----~l~~r~~~~~~n~~~l 293 (415)
T 2fq6_A 219 -FGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLR----TLGVRLRQHHESSLKV 293 (415)
T ss_dssp -GTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred -cCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh----HHHHHHHHHHHHHHHH
Confidence 23468999999999977765 69999999888888766543333344444444444443 3444455566677777
Q ss_pred HHHhhhC
Q 013883 381 VEGLNAV 387 (434)
Q Consensus 381 ~~~L~~~ 387 (434)
.+.|++.
T Consensus 294 ~~~L~~~ 300 (415)
T 2fq6_A 294 AEWLAEH 300 (415)
T ss_dssp HHHHHTC
T ss_pred HHHHHcC
Confidence 7777765
No 210
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.90 E-value=5e-23 Score=207.48 Aligned_cols=260 Identities=12% Similarity=0.100 Sum_probs=171.3
Q ss_pred CCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEE
Q 013883 142 YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCI 221 (434)
Q Consensus 142 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v 221 (434)
|.+...+.++++.+++ ++ . + + ++++++|+++++.+++.+++++||+|+++.|+|..+...+...|++++.+
T Consensus 53 ~~~~~~~~~~~~~la~-~g----~--~-~-~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v 123 (446)
T 2x3l_A 53 HHPEEVILKSMKQVEK-HS----D--Y-D-GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFI 123 (446)
T ss_dssp TSCSSHHHHHHHHHCS-CT----T--E-E-EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEEC
T ss_pred cCcchHHHHHHHHHHh-cC----C--C-c-eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEE
Confidence 3444445566666666 43 2 2 4 79999999999999999999999999999999999999999999999998
Q ss_pred Ec--CCCC----CCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCc-cccCCCCc
Q 013883 222 TL--RPPD----FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDK-LAFEMDHI 294 (434)
Q Consensus 222 ~~--~~~~----~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~-~~~~~~~~ 294 (434)
+. ++ + +.+|++.+ +.+++++|++++ +|+||.+.+ +++|+++|++||+++|+||+|.. +.|.+...
T Consensus 124 ~~~~~~-~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~~~ 195 (446)
T 2x3l_A 124 ETHQSP-LTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPD 195 (446)
T ss_dssp EEEECT-TTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTSCC
T ss_pred eCeecc-ccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCCCC
Confidence 88 43 3 45788877 456889999988 566999986 66799999999999999999986 33444311
Q ss_pred cccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHH--HHHHHhh-ccccCCchHHHHHHHHHHhCChHH-HHHHH
Q 013883 295 SIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW--GVRQAHS-FLTFATSTPMQWAATAALRAPETY-YEELK 370 (434)
Q Consensus 295 ~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~--~l~~~~~-~~~~~~~~~~q~a~~~~L~~~~~~-~~~~~ 370 (434)
....+ +..+++.|++|.++ ++.++||+++++++++ .++.... ....+++.....++..+++..+++ .+++.
T Consensus 196 ~~~~~----g~Di~~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~ 270 (446)
T 2x3l_A 196 STLNY----QADYVVQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFF 270 (446)
T ss_dssp CGGGG----TCSEEEECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred ChHHc----CCCEEEECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHH
Confidence 22222 12488999999764 3445899999877654 3322211 122333333332322233211110 11134
Q ss_pred HHHHHHHHHHHHHhhhCCCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE-CCC
Q 013883 371 RDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI-PTS 431 (434)
Q Consensus 371 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~-pG~ 431 (434)
++.+++++.+++. |+++..+..+.++|+.+. +. +..+++++|.++ ||.+. +|.
T Consensus 271 ~~~~~l~~~l~~~----g~~~~~~~~~~~l~i~~~--~~-~~~~l~~~L~~~-GI~v~~~g~ 324 (446)
T 2x3l_A 271 AKRAQLIECLENK----GFEMLQVDDPLKLLIKYE--GF-TGHDIQNWFMNA-HIYLELADD 324 (446)
T ss_dssp HHHHHHHHHHHHH----TCEEEECSSTTEEEEECT--TS-CHHHHHHHHHHT-TEEESEECS
T ss_pred HHHHHHHHHHHHc----CCEECcCCCCeEEEEEeC--Cc-CHHHHHHHHHHC-CCEEEecCC
Confidence 4444455555544 788776654446777764 32 577888888776 99998 664
No 211
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.89 E-value=3.5e-22 Score=197.05 Aligned_cols=264 Identities=13% Similarity=0.093 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHH--HHHHHcC--CEEEEEEcCC
Q 013883 150 EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE--ATLSMAG--AKIKCITLRP 225 (434)
Q Consensus 150 ~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~G--~~~~~v~~~~ 225 (434)
++.+++++.+.+..|.+ + .+++++|+++++.+++.. +++||+|++.++.|+++. ..+...| .+++.++.+.
T Consensus 35 ~~~~~~~~~l~~~~~~~---~-~v~~~~sgt~a~~~~~~~-~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 109 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAE---A-AVIIPGSGTYGMEAVARQ-LTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAER 109 (379)
T ss_dssp HHHHHHHHHHHHHHTCS---E-EEEEESCHHHHHHHHHHH-HCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEE
T ss_pred HHHHHHHHHHHHHhCCC---C-EEEEcCChhHHHHHHHHh-CCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccc
Confidence 45555555555555543 4 799999999999998754 579999999999998753 3455566 4777777643
Q ss_pred C-------C-CCCCHHHHHhhcc-cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccc
Q 013883 226 P-------D-FAIPIEELKSTIS-KNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISI 296 (434)
Q Consensus 226 ~-------~-~~~d~~~l~~~i~-~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~ 296 (434)
. . ..+|++.++++++ .++++|++++++||||.+++.+++++|.++|++||+++|+|+++. . +....+
T Consensus 110 ~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~~~~~~ 185 (379)
T 3ke3_A 110 TEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---CVWLDM 185 (379)
T ss_dssp SSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---TCCCCH
T ss_pred cccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---Cccccc
Confidence 1 1 2589999999996 489999999999999999999999999999999999999999976 2 222222
Q ss_pred cCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhh--------------------c--cccCCchHHHHH
Q 013883 297 ASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS--------------------F--LTFATSTPMQWA 354 (434)
Q Consensus 297 ~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~--------------------~--~~~~~~~~~q~a 354 (434)
.. .+..+++.|++|.++ .+.++|++++++++++.+..... . ..++++...+.+
T Consensus 186 ~~----~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a 260 (379)
T 3ke3_A 186 KE----LGIDVLISAPQKGWS-STPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQ 260 (379)
T ss_dssp HH----HTCSEEEECTTTTTC-SCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHH
T ss_pred cc----cCCCEEEecchhhcC-CCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHH
Confidence 11 133578899999987 44569999999998877653110 0 123667777777
Q ss_pred HHHHHhCChH-HHHHHHHHHHHHHHHHHHHhhhCCCEeecCC---eeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 355 ATAALRAPET-YYEELKRDYSAKKAILVEGLNAVGFKVFPSS---GTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 355 ~~~~L~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+.++|+...+ .+++++++++++++++++.|+++|+.+..+. .+....+... + ....+...| +++||.+.||
T Consensus 261 ~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~--~--~~~~~~~~L-~~~Gi~v~~g 335 (379)
T 3ke3_A 261 FRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTE--R--DDMHKGSAF-AEAGLQIAAG 335 (379)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECS--C--HHHHSSHHH-HHTTCCCEEC
T ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccC--C--cchHHHHHH-HHCCeEEeCC
Confidence 7777765332 2677888999999999999999998876543 2222222221 1 122234555 5569999998
Q ss_pred CC
Q 013883 431 SV 432 (434)
Q Consensus 431 ~~ 432 (434)
..
T Consensus 336 ~~ 337 (379)
T 3ke3_A 336 VP 337 (379)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 212
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.89 E-value=7.7e-22 Score=201.05 Aligned_cols=289 Identities=13% Similarity=0.080 Sum_probs=203.4
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-------CCCcEEEcCChHHHHHHHHHHccCC---
Q 013883 124 PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVD-------PEKEVTVTSGCTEAIAATILGLINP--- 193 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-------~~~~i~~t~G~~~ai~~~~~~l~~~--- 193 (434)
+..+.+.+..++......|....+..++++.+++++.+.+|.+.+ .. .+++|+|+++++..++.++.++
T Consensus 87 ~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-~~v~t~ggTeA~~~al~~~~~~~~~ 165 (486)
T 1js3_A 87 PAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEG-GGVIQGSASEATLVALLAARTKVVR 165 (486)
T ss_dssp HHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSC-EEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCC-CeEEcCCcHHHHHHHHHHHHHHHhh
Confidence 345666666666544456666556789999999999999887632 23 6899999999998888765421
Q ss_pred ------CC--------e--EEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCc------EEEecCC
Q 013883 194 ------GD--------E--VILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTR------AILMNTP 251 (434)
Q Consensus 194 ------gd--------~--Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~------~i~~~~p 251 (434)
|| + |+++.+.|..+...+..+|++++.+|.+ +++.+|++.|+++++++++ +|++++|
T Consensus 166 ~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~ 244 (486)
T 1js3_A 166 RLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD-GKFAMRASALQEALERDKAAGLIPFFVVATLG 244 (486)
T ss_dssp HHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC-TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred hhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC-CCCCCCHHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 43 3 7889999999999999999999999987 4789999999999987653 7888999
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC-CCccc-cCCCCCCCceEEEccCChhhccccceeeeEEeC
Q 013883 252 HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISI-ASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 252 ~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~-~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
+||||.+- ++++|+++|++||+++++|++|.++.+.. +.... ..+ .+-..+..+++|.++.+ +++|+++++
T Consensus 245 ~n~tG~~~---~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~---~~adsi~~~~hK~~~~p-~~~G~l~~~ 317 (486)
T 1js3_A 245 TTSCCSFD---NLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGV---EFADSFNFNPHKWLLVN-FDCSAMWVK 317 (486)
T ss_dssp CTTTCCBC---CHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTG---GGCSEEEECHHHHSSCC-SSCEEEEES
T ss_pred CCCCCCCC---CHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCc---cccCeeEEchhhhcCCC-cceEEEEEe
Confidence 99999874 57789999999999999999999865432 12111 111 11234567889999854 899999997
Q ss_pred hhh--HHHHHHHhhcc--------------------ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC
Q 013883 330 PHL--TWGVRQAHSFL--------------------TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV 387 (434)
Q Consensus 330 ~~~--~~~l~~~~~~~--------------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (434)
.+. .+.+.....+. ......+.+.++...+. .++++++.+++.++++++.+.|++.
T Consensus 318 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~ 395 (486)
T 1js3_A 318 RRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG--VKGLQAYIRKHVQLSHEFEAFVLQD 395 (486)
T ss_dssp CHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 542 22221100000 00123445555555553 4578888899999999999999987
Q ss_pred -CCEee-cCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeE
Q 013883 388 -GFKVF-PSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVV 426 (434)
Q Consensus 388 -g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~ 426 (434)
|+++. +++.+++.| .+.+.. ....++.++|.++ |+.
T Consensus 396 ~~~~~~~~~~~~~v~f-~~~~~~-~~~~~l~~~L~~~-g~~ 433 (486)
T 1js3_A 396 PRFEVCAEVTLGLVCF-RLKGSD-GLNEALLERINSA-RKI 433 (486)
T ss_dssp TTEEECSCCCSSEEEE-EESSCH-HHHHHHHHHHHHH-TSC
T ss_pred CCeEEeCCCceeEEEE-EecChH-HHHHHHHHHHHhc-CCE
Confidence 88876 466676655 332110 0146788888766 644
No 213
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.89 E-value=6.3e-21 Score=189.34 Aligned_cols=208 Identities=15% Similarity=0.196 Sum_probs=158.8
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH-----HHcCCEEEEEEc
Q 013883 149 PEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL-----SMAGAKIKCITL 223 (434)
Q Consensus 149 ~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~-----~~~G~~~~~v~~ 223 (434)
.+|++.++++.+ .+ +.++++++++|+.. +..++++||+|++++|.|++....+ ...|++++.++.
T Consensus 70 ~~l~~~la~l~g--------~~-~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 139 (400)
T 3nmy_A 70 FAYERCVAALEG--------GT-RAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDL 139 (400)
T ss_dssp HHHHHHHHHHHT--------CS-EEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECT
T ss_pred HHHHHHHHHHhC--------CC-CEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECC
Confidence 456666666554 23 45666666999997 5678999999999999999765554 346999999876
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCC
Q 013883 224 RPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMY 303 (434)
Q Consensus 224 ~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~ 303 (434)
+ |++.+++++++++++|++++|+||||.+++ +++|+++|++||+++|+||+|....+. . ++ . .
T Consensus 140 ~------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~-~--~~-~----~ 202 (400)
T 3nmy_A 140 T------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ-R--PL-S----L 202 (400)
T ss_dssp T------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC-C--GG-G----G
T ss_pred C------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC-C--hh-h----c
Confidence 5 799999999999999999999999999995 778999999999999999999854322 1 11 1 2
Q ss_pred CceEEEccCChhhccccceeee--EE-eChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 013883 304 ERTVTMNSLGKTFSLTGWKIGW--AI-APPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAIL 380 (434)
Q Consensus 304 ~~~i~i~S~SK~~g~~G~R~G~--~~-~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l 380 (434)
+.++++.|++|.++.+|.++|. ++ .++++.+.++........+.++...+++...|+. +....++..++...+
T Consensus 203 g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~----l~~r~~~~~~~a~~l 278 (400)
T 3nmy_A 203 GADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT----LPLRMRAHCENALAL 278 (400)
T ss_dssp TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHH
T ss_pred CCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH----HHHHHHHHHHHHHHH
Confidence 3558999999999877777755 33 3677888888777666667777777777777765 344456667777888
Q ss_pred HHHhhhC
Q 013883 381 VEGLNAV 387 (434)
Q Consensus 381 ~~~L~~~ 387 (434)
.+.|++.
T Consensus 279 ~~~L~~~ 285 (400)
T 3nmy_A 279 AQWLETH 285 (400)
T ss_dssp HHHHTTC
T ss_pred HHHHHcC
Confidence 8888765
No 214
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.89 E-value=2.5e-21 Score=198.22 Aligned_cols=288 Identities=10% Similarity=0.048 Sum_probs=203.9
Q ss_pred HHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccC--------CC-----C
Q 013883 129 DAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLIN--------PG-----D 195 (434)
Q Consensus 129 ~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~--------~g-----d 195 (434)
+.+...+......|....+..++++.+.+++.+..|.+.+++ ++++++|+++++..++.++.. +| +
T Consensus 111 ~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~-~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~ 189 (504)
T 2okj_A 111 EWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDG-DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK 189 (504)
T ss_dssp HHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSC-EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCC
T ss_pred HHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCCC-CEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCC
Confidence 444333333334565555567788888888888888754455 899999999999999888753 56 6
Q ss_pred -eEEEcCCCchhHHHHHHHcCC---EEEEEEcCCCCCCCCHHHHHhhccc------CCcEEEecCCCCCcccCCCHHHHH
Q 013883 196 -EVILFAPFYDSYEATLSMAGA---KIKCITLRPPDFAIPIEELKSTISK------NTRAILMNTPHNPTGKMFTREELN 265 (434)
Q Consensus 196 -~Vlv~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~i~~~~p~NPTG~~~~~e~l~ 265 (434)
.|+++.+.|+.+...+..+|. +++.+|.++ ++.+|++.|++++++ ++++|++++|+||||.+.+ ++
T Consensus 190 ~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~ 265 (504)
T 2okj_A 190 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQ 265 (504)
T ss_dssp EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HH
T ss_pred eEEEECCcchHHHHHHHHHcCCCcccEEEEecCC-CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HH
Confidence 789999999999999998887 899999874 789999999999976 5789999999999999864 67
Q ss_pred HHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeCh-hhHHHHHH-Hhhcc
Q 013883 266 VIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP-HLTWGVRQ-AHSFL 343 (434)
Q Consensus 266 ~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~-~~~~~l~~-~~~~~ 343 (434)
+|+++|++||+++++|++|.++.+...... ..+.+.....+++.+++|.++.+ .++|++++++ +++..... ...+.
T Consensus 266 ~I~~la~~~g~~lhvD~a~~~~~~~~~~~~-~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l 343 (504)
T 2okj_A 266 EIADICEKYNLWLHVDAAWGGGLLMSRKHR-HKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYL 343 (504)
T ss_dssp HHHHHHHHHTCEEEEEETTGGGGGGCTTTG-GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSS
T ss_pred HHHHHHHHcCCEEEEehhhhhHHHhCHhhH-hhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccc
Confidence 799999999999999999998765321110 11121112236778999999844 7899999976 45543211 11111
Q ss_pred cc--------------------CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeec---CCeeEE
Q 013883 344 TF--------------------ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFP---SSGTYF 399 (434)
Q Consensus 344 ~~--------------------~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~~~~~~ 399 (434)
.. ....+.++++..++. .+.++++.++..++++++.+.|++. |+++.. +..+++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v 421 (504)
T 2okj_A 344 FQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG--TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNV 421 (504)
T ss_dssp CCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCE
T ss_pred cCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEE
Confidence 00 113456666666665 4567888889999999999999986 888874 667777
Q ss_pred EeeecCCC--CCC-----------CHHHHHHHHHHhcCeE
Q 013883 400 VVVDHTPF--GHE-----------TDIAFCEYLIKEVGVV 426 (434)
Q Consensus 400 ~~~~~~~~--~~~-----------~~~~~~~~Ll~~~GV~ 426 (434)
+|...+.. +.. ...++.++|.++ |+.
T Consensus 422 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~ 460 (504)
T 2okj_A 422 CFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTT 460 (504)
T ss_dssp EEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHH-TSC
T ss_pred EEEEeCccccccccchhhHHHHHHHHHHHHHHHHhC-CcE
Confidence 66433210 100 134677778766 753
No 215
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.89 E-value=1.8e-21 Score=199.31 Aligned_cols=269 Identities=11% Similarity=0.054 Sum_probs=199.0
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccC-----------
Q 013883 124 PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLIN----------- 192 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~----------- 192 (434)
+..+.+.+..++......|....+..++++.+++++.+.+|.+.+++ .+++++|+++++..++.++.+
T Consensus 109 ~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~ 187 (511)
T 3vp6_A 109 IGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDG-DGIFSPGGAISNMYSIMAARYKYFPEVKTKGM 187 (511)
T ss_dssp HHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSC-EEEEESSHHHHHHHHHHHHHHHHCTHHHHHCG
T ss_pred HHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCC-ceEECCchHHHHHHHHHHHHHHhhhhhhhcCc
Confidence 34455666666666567788777888999999999999999876566 799999999999888877654
Q ss_pred ---CCCeEEEcCCCchhHHHHHHHcCC---EEEEEEcCCCCCCCCHHHHHhhcccC------CcEEEecCCCCCcccCCC
Q 013883 193 ---PGDEVILFAPFYDSYEATLSMAGA---KIKCITLRPPDFAIPIEELKSTISKN------TRAILMNTPHNPTGKMFT 260 (434)
Q Consensus 193 ---~gd~Vlv~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~i~~~~p~NPTG~~~~ 260 (434)
+++.|+++.+.|..+...+..+|+ +++.++.++ ++.+|++.|+++++++ +++|+++.|+||||.+-
T Consensus 188 ~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd- 265 (511)
T 3vp6_A 188 AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD- 265 (511)
T ss_dssp GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBC-
T ss_pred ccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCC-CCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccc-
Confidence 577899999999999999999998 899999875 6899999999999764 78899999999999985
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh-hHHHHHHH
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH-LTWGVRQA 339 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~-~~~~l~~~ 339 (434)
++++|+++|++||+|+++|++|........... ..+.+...-.+++.+++|.++.+ ..+|+++.+.+ .+......
T Consensus 266 --~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~-~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~ 341 (511)
T 3vp6_A 266 --PIQEIADICEKYNLWLHVDAAWGGGLLMSRKHR-HKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQM 341 (511)
T ss_dssp --CHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTG-GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCC
T ss_pred --cHHHHHHHHHHcCCEEEEEccchhhHhhChhhh-hhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhcc
Confidence 578899999999999999999987654221111 01111112246678999999844 66888887643 44433211
Q ss_pred h-hccc--------------c------CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeec---C
Q 013883 340 H-SFLT--------------F------ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFP---S 394 (434)
Q Consensus 340 ~-~~~~--------------~------~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~ 394 (434)
. .+.. + ........++..++ ..+++++++++..++.+++.+.|++. |+++.. +
T Consensus 342 ~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~--g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p 419 (511)
T 3vp6_A 342 HASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK--GTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEP 419 (511)
T ss_dssp CCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCC
T ss_pred CCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCC
Confidence 0 0000 0 01233344444444 35678889999999999999999986 888875 5
Q ss_pred CeeEEEe
Q 013883 395 SGTYFVV 401 (434)
Q Consensus 395 ~~~~~~~ 401 (434)
..+.++|
T Consensus 420 ~~~~v~f 426 (511)
T 3vp6_A 420 EHTNVCF 426 (511)
T ss_dssp SSSCEEE
T ss_pred CeEEEEE
Confidence 5665544
No 216
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.88 E-value=5.7e-22 Score=200.43 Aligned_cols=261 Identities=16% Similarity=0.121 Sum_probs=183.8
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH-HHHHHHHHHccC--CCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT-EAIAATILGLIN--PGDEVILFAPFYDSYEATLSMAGAKIKCITLR 224 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~-~ai~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~ 224 (434)
..++.+++.+++.+.+|.+ + .+++|+|++ .++..++.++.. +|+.|+++++.|..+...++..|++++.++..
T Consensus 131 ~~~~~~~~~~~la~~~g~~--~--~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~ 206 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLN--V--HAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETV 206 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCC--C--EEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred HHHHHHHHHHHHHHHcCCC--C--CEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEe
Confidence 4567777777787777753 2 299999999 466555555433 67889999999999999999999999999873
Q ss_pred --CCCCCCCHHHHHhhc-c----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCcccc
Q 013883 225 --PPDFAIPIEELKSTI-S----KNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIA 297 (434)
Q Consensus 225 --~~~~~~d~~~l~~~i-~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~ 297 (434)
++++.+|++.+++++ + .++++|++++|+||||.+.+ +++|+++|+++|+++++|++|..+..+.......
T Consensus 207 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~ 283 (456)
T 2z67_A 207 LDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLEKLKK 283 (456)
T ss_dssp EETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHH
T ss_pred ccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHH
Confidence 246789999999999 5 36677778999999999974 6678899999999999999998765421111111
Q ss_pred CCCCCCCceEEEccCChhhccccceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 013883 298 SLPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAK 376 (434)
Q Consensus 298 ~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~ 376 (434)
.+.+ ...+++.|++|.++ .++++||+++ ++++++.+...........+...+.++...+. .++++++.+++.++
T Consensus 284 ~~~~--~~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~--~~~~~~~~~~~~~~ 358 (456)
T 2z67_A 284 AFKY--RVDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG--SKNYLELVKNQKNS 358 (456)
T ss_dssp HHTS--CCSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred hhCC--CCCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 1111 22367889999775 6789999999 57777766332211111122344555555553 45678888999999
Q ss_pred HHHHHHHhhhC----CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCe
Q 013883 377 KAILVEGLNAV----GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGV 425 (434)
Q Consensus 377 ~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV 425 (434)
++++.+.|++. |+.+.+++ ++ +++.+...+ ...++.++|.++ ||
T Consensus 359 ~~~l~~~L~~~~~~~g~~v~~~~-~~-v~~~~~~~~--~~~~l~~~L~~~-gi 406 (456)
T 2z67_A 359 KKLLDELLNDLSKKTGGKFLDVE-SP-IASCISVNS--DPVEIAAKLYNL-RV 406 (456)
T ss_dssp HHHHHHHHHHHHHHSSCCBCCCC-CS-SEEEEECSS--CHHHHHHHHHHT-TE
T ss_pred HHHHHHHHHhcccccCCEecCCC-Ce-EEEEEeccc--HHHHHHHHHHHc-CC
Confidence 99999999886 88777776 43 344441111 146788888765 64
No 217
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.88 E-value=2e-21 Score=195.37 Aligned_cols=290 Identities=17% Similarity=0.202 Sum_probs=188.1
Q ss_pred eEeCCCCCCCCCcHHHHHHHH--HHHHcCCCCCCC-----CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 112 INLGQGFPNFDGPDFVKDAAI--QAIRDGKNQYAR-----GHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 112 i~l~~g~p~~~~~~~v~~~~~--~~~~~~~~~Y~~-----~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
..++.|.++...|+.+.+.+. +... .|.+ ..|..++.+++.+.+.+..|. +++ ++++++|++.+.+
T Consensus 67 ~~~~~g~~~~~~p~~v~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~-~i~~~~g~taa~e 139 (438)
T 1wyu_A 67 AFLGGGVRSHHVPPVVQALAARGEFLT----AYTPYQPEVSQGVLQATFEYQTMIAELAGL--EIA-NASMYDGATALAE 139 (438)
T ss_dssp CCCCSSCCCCCCCHHHHHHHTSHHHHH----CCSCCSGGGCHHHHHHHHHHHHHHHHHHTS--SEE-CSCBSSHHHHHHH
T ss_pred cccCCCccCCcCcHHHHHHHhcchhhh----cCCCCcchhhhhHHHHHHHHHHHHHHHhCC--Ccc-ceEEeCcHHHHHH
Confidence 466778877777777654441 2222 2443 345556666666666666665 355 6899999994444
Q ss_pred HHHHH-ccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCC
Q 013883 185 ATILG-LINPGDEVILFAPFYDSYEATL----SMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMF 259 (434)
Q Consensus 185 ~~~~~-l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~ 259 (434)
.++.+ ..++||+|+++.+.|+.+...+ +..|++++.++.. ++.+|++. +++++++|++++| ||||.+.
T Consensus 140 a~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~--~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~ 212 (438)
T 1wyu_A 140 GVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLE--GGRTPLPE----VGEEVGAVVVQNP-NFLGALE 212 (438)
T ss_dssp HHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCB--TTBCCCCC----CCTTEEEEEEESS-CTTSBCC
T ss_pred HHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCc--CCccCHHH----hCCCeEEEEEECC-CCCeEEe
Confidence 33333 2578999999999999987655 4489999999873 56777766 6778999999999 9999998
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCc---CCccccCCCCccccCCCCCCCceEEEccCChhh----ccccceeeeEEeChhh
Q 013883 260 TREELNVIASLCIENDVLVFSDEV---YDKLAFEMDHISIASLPGMYERTVTMNSLGKTF----SLTGWKIGWAIAPPHL 332 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Dea---y~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~----g~~G~R~G~~~~~~~~ 332 (434)
++++|+++|+++|+++|+|.. |..+. .... .+..+++.| +|.| ++.|+|+||+++++++
T Consensus 213 ---~l~~i~~la~~~g~~vivd~d~~a~g~~~------~~~~----~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~ 278 (438)
T 1wyu_A 213 ---DLGPFAEAAHGAGALFVAVADPLSLGVLK------PPGA----YGADIAVGD-GQSLGLPMGFGGPHFGFLATKKAF 278 (438)
T ss_dssp ---CHHHHHHHHHHTTCEEEEECCTTGGGTBC------CHHH----HTCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGG
T ss_pred ---cHHHHHHHHHHcCCEEEEEechhhccCcC------CCcc----CCCCEEEEC-CcccCCCccCCCCCeeEEEEcHHH
Confidence 477799999999999996632 32210 0111 122355555 5544 4668899999999887
Q ss_pred HHHHHHH-------------------------h-hccccCC---chHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHH
Q 013883 333 TWGVRQA-------------------------H-SFLTFAT---STPMQWAATAALRA-PETYYEELKRDYSAKKAILVE 382 (434)
Q Consensus 333 ~~~l~~~-------------------------~-~~~~~~~---~~~~q~a~~~~L~~-~~~~~~~~~~~~~~~~~~l~~ 382 (434)
++.+... + ...+.+. ......+++.+|.. ..+.++++.+++.++++++.+
T Consensus 279 ~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~ 358 (438)
T 1wyu_A 279 VRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHA 358 (438)
T ss_dssp GGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 6544110 0 0112222 12222222222332 234578888999999999999
Q ss_pred HhhhC-CCEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEE--ECCCCC
Q 013883 383 GLNAV-GFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVA--IPTSVF 433 (434)
Q Consensus 383 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v--~pG~~F 433 (434)
.|+++ |+++..+. .+|.++.+. .+ .+..+++++|.++ ||.+ .+|..|
T Consensus 359 ~L~~~~g~~~~~~~-~~~~~~~~~-~~-~~~~~~~~~L~~~-gi~v~~~~~~~~ 408 (438)
T 1wyu_A 359 LLLEVPGVRPFTPK-PFFNEFALA-LP-KDPEAVRRALAER-GFHGATPVPREY 408 (438)
T ss_dssp HHTTSTTCEECSCS-SBCSEEEEE-CS-SCHHHHHHHHHHT-TCCCCEECCTTS
T ss_pred HHhcCCCeEECCCC-CeEEEEEEe-CC-CCHHHHHHHHHHC-Cceecccccccc
Confidence 99998 99987654 333322221 12 2577899998765 9999 777654
No 218
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.88 E-value=1.7e-22 Score=205.05 Aligned_cols=305 Identities=11% Similarity=0.098 Sum_probs=199.2
Q ss_pred cCCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcC----CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH
Q 013883 108 KHGAINLGQGFPN--FD-GPDFVKDAAIQAIRDG----KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCT 180 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~----~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~ 180 (434)
+...|||..|... +. .+|.+.+++.+++... ...|.. ....+|++++++.+.+..+. +.+ +|++++|++
T Consensus 62 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~--~~~-~v~f~~sGs 137 (472)
T 1ohv_A 62 GNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPK--GMS-QLITMACGS 137 (472)
T ss_dssp SCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCT--TCC-EEEEESSHH
T ss_pred CCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCC--CcC-EEEEeCCch
Confidence 3467899777432 22 4788888888875321 122332 23578999999987765543 355 899999999
Q ss_pred HHHHHHHHHcc--------C-----------------CC---CeEEEcCCCchhHHHHHH-HcCCE--------E---EE
Q 013883 181 EAIAATILGLI--------N-----------------PG---DEVILFAPFYDSYEATLS-MAGAK--------I---KC 220 (434)
Q Consensus 181 ~ai~~~~~~l~--------~-----------------~g---d~Vlv~~p~y~~~~~~~~-~~G~~--------~---~~ 220 (434)
+|+..+++.+. . || ++|++.++.|+++..... ..|.+ . ..
T Consensus 138 eA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~ 217 (472)
T 1ohv_A 138 CSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPI 217 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCE
T ss_pred hHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcc
Confidence 99999998763 1 45 899999999998655443 33321 1 11
Q ss_pred EEcCCCCC-------------CCCHHHHHhhccc------CCcEEEecCCCCCccc-CCCHHHHHHHHHHHHHcCcEEEE
Q 013883 221 ITLRPPDF-------------AIPIEELKSTISK------NTRAILMNTPHNPTGK-MFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 221 v~~~~~~~-------------~~d~~~l~~~i~~------~~~~i~~~~p~NPTG~-~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+++....+ ..|++.|++++++ ++++|+++..+|++|. .++.+.+++|.++|++||+++|+
T Consensus 218 ~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~ 297 (472)
T 1ohv_A 218 APFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLV 297 (472)
T ss_dssp ECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 22211000 1268899999876 7788888777888997 56899999999999999999999
Q ss_pred cCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHh
Q 013883 281 DEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALR 360 (434)
Q Consensus 281 Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~ 360 (434)
||+|.+|.+.|....+..+... ..+.+.||||.+ +.| ||++ ++++. .+.......+++.+++.+.++.++|+
T Consensus 298 DEv~~g~g~~g~~~~~~~~gv~--~~~Di~t~sK~~-l~G---G~~~-~~~~~-~~~~~~~~~T~~~~~~~~aaa~aal~ 369 (472)
T 1ohv_A 298 DEVQTGGGSTGKFWAHEHWGLD--DPADVMTFSKKM-MTG---GFFH-KEEFR-PNAPYRIFNTWLGDPSKNLLLAEVIN 369 (472)
T ss_dssp ECTTTTTTTTSSSSGGGGGCCS--SCCSEEEECGGG-SSE---EEEE-CGGGS-CSSSSSSCCSSSSCHHHHHHHHHHHH
T ss_pred eCcccCCCCCCCchhccccCCC--CCCCEEEEcccc-ccC---CccC-chhhc-ccccccccCccCccHHHHHHHHHHHH
Confidence 9999987665543333332111 002245899995 335 7766 65552 12222334567778889988888887
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhC----C--CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 361 APETYYEELKRDYSAKKAILVEGLNAV----G--FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~l~~~L~~~----g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
..++ +++.++++++++++++.|+++ . +....+.|.|+ ++++.. ..+..+++++|++ +||.+.|+
T Consensus 370 ~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~-~~~~~~--~~~~~~~~~~l~~-~Gv~~~~~ 439 (472)
T 1ohv_A 370 IIKR--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFC-SFDTPD--ESIRNKLISIARN-KGVMLGGC 439 (472)
T ss_dssp HHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEE-EEECSS--HHHHHHHHHHHHH-TTEECEEE
T ss_pred HHHh--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEE-EEEeCC--hhHHHHHHHHHHH-CCeEEecC
Confidence 4221 235667777777777777654 1 33345555554 445532 1125678888886 59999985
No 219
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.86 E-value=3.7e-20 Score=185.18 Aligned_cols=216 Identities=16% Similarity=0.125 Sum_probs=155.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEE-E
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCI-T 222 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v-~ 222 (434)
..+|+++++++++ .+..+++++| ++++..++.+++++||+|+++.+.|+++...+ ...|++++.+ +
T Consensus 60 ~~~l~~~la~~~g--------~~~~v~~~sG-t~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 130 (421)
T 2ctz_A 60 VDVLEKRLAALEG--------GKAALATASG-HAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR 130 (421)
T ss_dssp HHHHHHHHHHHHT--------CSEEEEESSH-HHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred HHHHHHHHHHHhC--------CCceEEecCH-HHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC
Confidence 4678888888876 1225555555 99999999999999999999999999987765 7789999887 5
Q ss_pred cCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCC
Q 013883 223 LRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGM 302 (434)
Q Consensus 223 ~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~ 302 (434)
.+ |++.+++++++++++|++++|+||||.+++ +++|+++|++||+++|+|++|..+.+.+.. + .
T Consensus 131 ~~------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g~~~~~--~-~---- 194 (421)
T 2ctz_A 131 EE------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYLLRP--L-A---- 194 (421)
T ss_dssp TC------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTSCCG--G-G----
T ss_pred CC------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccccccCCc--c-c----
Confidence 53 799999999999999999999999999997 778999999999999999999333232221 1 1
Q ss_pred CCceEEEccCChhhccccceeeeEEeC---hhh----HHHHHH----------------------Hh----hccccCCch
Q 013883 303 YERTVTMNSLGKTFSLTGWKIGWAIAP---PHL----TWGVRQ----------------------AH----SFLTFATST 349 (434)
Q Consensus 303 ~~~~i~i~S~SK~~g~~G~R~G~~~~~---~~~----~~~l~~----------------------~~----~~~~~~~~~ 349 (434)
.+..+++.|++|.++.+|.|+|++++. .++ .+.+.. .+ .......+.
T Consensus 195 ~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~ 274 (421)
T 2ctz_A 195 WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGP 274 (421)
T ss_dssp GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCH
T ss_pred cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCH
Confidence 134588999999999889999988874 222 122211 00 001123344
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEee
Q 013883 350 PMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVF 392 (434)
Q Consensus 350 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 392 (434)
...+++...|+. +....++..++.+.+.+.|++. ++..+
T Consensus 275 ~~a~~~~~~l~~----l~~r~~~~~~~a~~l~~~L~~~p~v~~v 314 (421)
T 2ctz_A 275 FEAWVVLLGMET----LSLRAERHVENTLHLAHWLLEQPQVAWV 314 (421)
T ss_dssp HHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred HHHHHHHcCcch----HHHHHHHHHHhHHHHHHHHHhCCCeeEE
Confidence 444444455553 3344555567888888888876 66654
No 220
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.85 E-value=1.2e-20 Score=192.88 Aligned_cols=294 Identities=13% Similarity=0.123 Sum_probs=195.5
Q ss_pred cHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHc----c-------
Q 013883 124 PDFVKDAAIQAIRDG-KNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGL----I------- 191 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l----~------- 191 (434)
++.+.+++.....+. ...|....+..++++.+.+++.+..|.+ ..+ ++++|+|+++++..++.++ +
T Consensus 113 ~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~-~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~ 190 (497)
T 2qma_A 113 MPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKA-DGIFTSGGTQSNQMGLMLARDWIADKLSGHS 190 (497)
T ss_dssp HHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTC-EEEEESSHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCC-CeEEcCCchHHHHHHHHHHHHHHHHhhcccc
Confidence 455555554443332 2344444456788888888888888864 224 8999999999999888773 3
Q ss_pred --CC------CC-eEEEcCCCchhHHHHHHHcCC---EEEEEEcCCCCCCCCHHHHHhhcccC----Cc--EEEecCCCC
Q 013883 192 --NP------GD-EVILFAPFYDSYEATLSMAGA---KIKCITLRPPDFAIPIEELKSTISKN----TR--AILMNTPHN 253 (434)
Q Consensus 192 --~~------gd-~Vlv~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~d~~~l~~~i~~~----~~--~i~~~~p~N 253 (434)
.+ || .|+++.+.|..+...+..+|. +++.+|.++ ++.+|++.|+++++++ ++ +|+++.++|
T Consensus 191 ~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~ 269 (497)
T 2qma_A 191 IQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANA-DGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTT 269 (497)
T ss_dssp HHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT-TSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCT
T ss_pred hhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCC-CCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCC
Confidence 12 46 799999999999999998877 799999874 7889999999999763 44 778888999
Q ss_pred CcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhh-
Q 013883 254 PTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL- 332 (434)
Q Consensus 254 PTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~- 332 (434)
|||.+.+ +++|+++|++||+++++|++|.++.+..+... .+.+.....+++.|++|.++.+ +++|+++++++.
T Consensus 270 ~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~--~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~ 343 (497)
T 2qma_A 270 DHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSSHKS--RLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSN 343 (497)
T ss_dssp TTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGSTTGG--GGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGG
T ss_pred CCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCcchH--hhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHH
Confidence 9999764 67799999999999999999998765433111 1112112236678999998844 799999986443
Q ss_pred HHHHHHHhhccccC----C-------------chHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEee-c
Q 013883 333 TWGVRQAHSFLTFA----T-------------STPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVF-P 393 (434)
Q Consensus 333 ~~~l~~~~~~~~~~----~-------------~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 393 (434)
++.+.....+.... + ..+.++++...+ ..+.++++.++..++++++.+.|++. +++++ +
T Consensus 344 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 421 (497)
T 2qma_A 344 FKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV--GPKALGDMYDHLLAQTLEVADMIRTNDQFELLAE 421 (497)
T ss_dssp GGGGCC--------------------CCSCCCTHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSC
T ss_pred HHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcC
Confidence 32221100000000 0 112223333333 35677888899999999999999986 88875 5
Q ss_pred CCeeEEEeeecCCCCCCC---HHHHHHHHHHhcCeEEECC
Q 013883 394 SSGTYFVVVDHTPFGHET---DIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~---~~~~~~~Ll~~~GV~v~pG 430 (434)
++.++++ +.+.+.+... ..++.++|.++ |+.+.++
T Consensus 422 ~~~~~v~-f~~~~~~~~~~~l~~~l~~~l~~~-G~~~~~~ 459 (497)
T 2qma_A 422 PSLSTVL-FRATHETADLDELNKALRLEALTR-GIAVLGE 459 (497)
T ss_dssp CSSSEEE-EEECCSSSCHHHHHHHHHHHHHHH-TSCBCEE
T ss_pred CCceEEE-EEEcCCccCHHHHHHHHHHHHHhC-CCEEEEe
Confidence 6666544 4443322110 23455666554 8877653
No 221
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.84 E-value=5.1e-20 Score=187.32 Aligned_cols=295 Identities=13% Similarity=0.071 Sum_probs=207.4
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCC--------CCcEEEcCChHHHHHHHHHHccC---
Q 013883 124 PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDP--------EKEVTVTSGCTEAIAATILGLIN--- 192 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~--------~~~i~~t~G~~~ai~~~~~~l~~--- 192 (434)
+..+.+.+..++......|....+..++++.+++++.+.+|.+... . ..++++|+++++..++.+..+
T Consensus 92 ~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~-~g~~~~ggt~an~~al~~ar~~~~ 170 (481)
T 4e1o_A 92 PSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQG-GGVLQSTVSESTLIALLAARKNKI 170 (481)
T ss_dssp HHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBC-EEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCC-ceEEeCchHHHHHHHHHHHHHHHH
Confidence 4456666666776666778777788999999999999998875332 2 578899999999888776532
Q ss_pred ----------------CCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccC------CcEEEecC
Q 013883 193 ----------------PGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKN------TRAILMNT 250 (434)
Q Consensus 193 ----------------~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~i~~~~ 250 (434)
+++.|+++.+.|..+...+...|++++.||.+ +++.+|++.|+++++++ +++|+++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~ 249 (481)
T 4e1o_A 171 LEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD-DNFSLRGEALQKAIEEDKQRGLVPVFVCATL 249 (481)
T ss_dssp HHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC-TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred HHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEec
Confidence 56799999999999999999999999999987 47899999999999763 56778888
Q ss_pred CCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCC-CccccCCCCCCCceEEEccCChhhccccceeeeEEeC
Q 013883 251 PHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMD-HISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 329 (434)
Q Consensus 251 p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~ 329 (434)
++|+||.+- ++++|+++|++||+++++|++|....+... ..... .+......+..+++|.++.| .-+|+++..
T Consensus 250 ~~t~~G~id---~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~--~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~ 323 (481)
T 4e1o_A 250 GTTGVCAFD---CLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFL--KGIEYADSFTFNPSKWMMVH-FDCTGFWVK 323 (481)
T ss_dssp SCTTTCCBC---CHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGG--TTGGGCSEEEECHHHHSSCC-SSCEEEEES
T ss_pred CCCCCcCcC---CHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHh--cCcccCCEEEEChHHhcCCC-CceEEEEEe
Confidence 999999875 577799999999999999999987643221 11111 11111235667999999855 457777765
Q ss_pred hh-hHHH-HHHHhhcc------------------ccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-C
Q 013883 330 PH-LTWG-VRQAHSFL------------------TFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-G 388 (434)
Q Consensus 330 ~~-~~~~-l~~~~~~~------------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 388 (434)
.+ .+.. +.....+. ........++++..++. .+.++++.++..++++++.+.|++. |
T Consensus 324 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~g 401 (481)
T 4e1o_A 324 DKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG--VKNLQAHVRHGTEMAKYFESLVRNDPS 401 (481)
T ss_dssp BHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred CHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 43 2221 10000000 00112344555555553 4568888999999999999999987 8
Q ss_pred CEeecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEEC
Q 013883 389 FKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 429 (434)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~p 429 (434)
+++..+....++++++.+.+ ....++.++|.++..+.+.|
T Consensus 402 ~~~~~~~~~~~v~f~~~~~~-~~~~~l~~~L~~~g~~~~~~ 441 (481)
T 4e1o_A 402 FEIPAKRHLGLVVFRLKGPN-SLTENVLKEIAKAGRLFLIP 441 (481)
T ss_dssp EECCSCCCSSEEEEEESSCH-HHHHHHHHHHHHHCSSBCEE
T ss_pred eEEecCCceeEEEEEeCCch-HHHHHHHHHHHhCCeEEEEe
Confidence 88875544445566653321 12567888888774355554
No 222
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.84 E-value=1.8e-19 Score=184.86 Aligned_cols=251 Identities=11% Similarity=0.058 Sum_probs=183.1
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc-------C-CCC------eEEEcCCCch
Q 013883 140 NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI-------N-PGD------EVILFAPFYD 205 (434)
Q Consensus 140 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~-------~-~gd------~Vlv~~p~y~ 205 (434)
..|....+..++.+.+.+++.+..|.+ ++ ++++++|+++++..++.++. + +|| .|+++.+.|+
T Consensus 138 ~~~~~s~~~~~le~~~~~~la~l~g~~--~~-~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~ 214 (515)
T 2jis_A 138 YTYEIAPVFVLMEEEVLRKLRALVGWS--SG-DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHY 214 (515)
T ss_dssp TCTTTCHHHHHHHHHHHHHHHHHHTCS--SC-EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCT
T ss_pred CchhhchHHHHHHHHHHHHHHHHhCCC--CC-CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccH
Confidence 356655566677888888888777765 45 89999999999988887763 2 575 8999999999
Q ss_pred hHHHHHHHcCC---EEEEEEcCCCCCCCCHHHHHhhccc------CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCc
Q 013883 206 SYEATLSMAGA---KIKCITLRPPDFAIPIEELKSTISK------NTRAILMNTPHNPTGKMFTREELNVIASLCIENDV 276 (434)
Q Consensus 206 ~~~~~~~~~G~---~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~ 276 (434)
.+...+..+|. +++.+|.++ ++.+|++.|++++++ ++++|++++|+||||.+.+ +++|+++|++||+
T Consensus 215 s~~~~~~~~g~g~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g~ 290 (515)
T 2jis_A 215 SIQKGAAFLGLGTDSVRVVKADE-RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHGL 290 (515)
T ss_dssp HHHHHHHHTTSCGGGEEEECBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCCCcEEEEecCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcCC
Confidence 99999999988 899999874 788999999999976 4789999999999999875 6779999999999
Q ss_pred EEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh--hHHHHH----HHh-hc-------
Q 013883 277 LVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH--LTWGVR----QAH-SF------- 342 (434)
Q Consensus 277 ~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~--~~~~l~----~~~-~~------- 342 (434)
++++|++|..+.+..+... ..+.+..+..+++.|++|.++ .+.++|+++++++ ++.+.. ... ..
T Consensus 291 ~l~vD~a~~~~~~~~~~~~-~~~~g~~~aD~v~~s~hK~l~-~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 368 (515)
T 2jis_A 291 WLHVDAAWGGSVLLSQTHR-HLLDGIQRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVA 368 (515)
T ss_dssp EEEEEETTGGGGGGCTTTG-GGGTTGGGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHHHHHCC---------CCSCGG
T ss_pred eEEEehhhhhHHHhChhhH-hhcCCCccCCEEEECcccccC-CCCCeeEEEEeChHHHHHHHhcCCchhccCCccccccc
Confidence 9999999998775432111 012222233478889999987 3467999999866 655421 110 00
Q ss_pred ---ccc------CCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCEeec-CCeeEEEe
Q 013883 343 ---LTF------ATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFKVFP-SSGTYFVV 401 (434)
Q Consensus 343 ---~~~------~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~ 401 (434)
... ....+.++++..++. .+.++++.++..++++++.+.|++. |+++.. +..+.++|
T Consensus 369 ~~~~~~~~~~~rr~~al~~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f 436 (515)
T 2jis_A 369 LDTGDKVVQCGRRVDCLKLWLMWKAQG--DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCF 436 (515)
T ss_dssp GCCGGGCSCSSCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEE
T ss_pred CCCCCCCCCCCCcccHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEE
Confidence 000 011344555555554 4567788889999999999999986 888764 34455554
No 223
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.84 E-value=1.2e-19 Score=191.77 Aligned_cols=234 Identities=14% Similarity=0.088 Sum_probs=160.0
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH-HHHcCCEEEEEEcCC
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT-LSMAGAKIKCITLRP 225 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~G~~~~~v~~~~ 225 (434)
-+.++++.+|++++ .+..+++++|+++++..++.+++++||+|+++.|.|.++... +...|++++.++...
T Consensus 174 ~i~e~e~~lA~~~g--------ae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~ 245 (730)
T 1c4k_A 174 PAVAAEKHAARVYN--------ADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNR 245 (730)
T ss_dssp HHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEE
T ss_pred HHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCc
Confidence 35678888888776 223688999999999999999999999999999999998887 888999999887653
Q ss_pred CCCC----CCHHHH-----HhhcccC------C----cEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCc
Q 013883 226 PDFA----IPIEEL-----KSTISKN------T----RAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDK 286 (434)
Q Consensus 226 ~~~~----~d~~~l-----~~~i~~~------~----~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~ 286 (434)
++++ +|++.+ +++++++ + +++++++| ||+|.+.+ +++|+++|++||+++|+||+|..
T Consensus 246 ~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~~ 321 (730)
T 1c4k_A 246 NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVG 321 (730)
T ss_dssp CTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTCC
T ss_pred cccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEccccc
Confidence 3343 688888 9988765 5 89999999 68999985 67799999999999999999975
Q ss_pred c-ccCCCCc---ccc--CCCCCCCceEEEccCChhhcccccee-eeEEeChhh-------H--HHHHHHhh-ccccCCch
Q 013883 287 L-AFEMDHI---SIA--SLPGMYERTVTMNSLGKTFSLTGWKI-GWAIAPPHL-------T--WGVRQAHS-FLTFATST 349 (434)
Q Consensus 287 ~-~~~~~~~---~~~--~~~~~~~~~i~i~S~SK~~g~~G~R~-G~~~~~~~~-------~--~~l~~~~~-~~~~~~~~ 349 (434)
. .+++... .+. .+..+..+++++.|++|.++ |.+. |+++.+.+. + ..++.... ....+++.
T Consensus 322 ~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~--g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~ 399 (730)
T 1c4k_A 322 YEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA--GFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFY 399 (730)
T ss_dssp GGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS--CCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCH
T ss_pred ccccCcccCCcCcccccccCCCCCCEEEEECCCCCCC--CCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcH
Confidence 3 3432111 111 11112346799999999864 6665 455443222 1 23332221 12233443
Q ss_pred HHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhhh--CCCEeecC
Q 013883 350 PMQWAATAALRAP-ETYYEELKRDYSAKKAILVEGLNA--VGFKVFPS 394 (434)
Q Consensus 350 ~~q~a~~~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~ 394 (434)
....++..++... .+..++..+++.++.+.+++.|++ .|+.+..+
T Consensus 400 ~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p 447 (730)
T 1c4k_A 400 PMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVP 447 (730)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccc
Confidence 4333333343321 212345566777778888888887 47776544
No 224
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.84 E-value=1.1e-19 Score=184.57 Aligned_cols=294 Identities=11% Similarity=0.035 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCC-------CCcEEEcCChHHHHHHHHHHccC-----
Q 013883 125 DFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDP-------EKEVTVTSGCTEAIAATILGLIN----- 192 (434)
Q Consensus 125 ~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-------~~~i~~t~G~~~ai~~~~~~l~~----- 192 (434)
..+.+.+..++......|....+..+|++.+.+++.+.+|.+.+. . ..++++|+++++..++.+..+
T Consensus 88 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~-~gv~t~ggt~anl~al~~ar~~~~~~ 166 (475)
T 3k40_A 88 AIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKG-GGVIQGTASESTLVALLGAKAKKLKE 166 (475)
T ss_dssp HHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSC-EEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCC-CeEEcCchHHHHHHHHHHHHHHHHHH
Confidence 445555656665555667777788899999999999998875321 2 588999999998877766521
Q ss_pred --------------CCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccC------CcEEEecCCC
Q 013883 193 --------------PGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKN------TRAILMNTPH 252 (434)
Q Consensus 193 --------------~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~i~~~~p~ 252 (434)
+++.|+++.+.|..+...+...|++++.||.++ ++ +|++.|+++++++ +++|+++.++
T Consensus 167 ~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~-~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~ 244 (475)
T 3k40_A 167 VKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSEN-HR-MRGAALEKAIEQDVAEGLIPFYAVVTLGT 244 (475)
T ss_dssp HHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCBT-TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSC
T ss_pred hhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECCC-CC-cCHHHHHHHHHHHHHCCCccEEEEEEecC
Confidence 346899999999999999999999999999975 67 9999999999764 5677888999
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCC-CCccccCCCCCCCceEEEccCChhhccccceeeeEEeChh
Q 013883 253 NPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH 331 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~ 331 (434)
|+||.+- ++++|+++|++||+++++|++|....+.. ..... +.+......+..+++|.++. ...+|+++....
T Consensus 245 t~~G~~~---~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~--~~gi~~~Ds~~~~~hK~l~~-p~g~g~l~~~~~ 318 (475)
T 3k40_A 245 TNSCAFD---YLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHL--MKGIESADSFNFNPHKWMLV-NFDCSAMWLKDP 318 (475)
T ss_dssp TTTCCBC---CHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGG--GTTGGGCSEEEECHHHHSSC-CSSCEEEEESSG
T ss_pred CCCcCcC---CHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHH--hcCcccCCEEEECchhccCC-CCceEEEEEeCH
Confidence 9999985 57779999999999999999998754322 11111 11111224667899998873 355788777643
Q ss_pred -hH-HHHHHHhhcc------------cc----C--CchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhC-CCE
Q 013883 332 -LT-WGVRQAHSFL------------TF----A--TSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAV-GFK 390 (434)
Q Consensus 332 -~~-~~l~~~~~~~------------~~----~--~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 390 (434)
.+ +.+.....+. .+ + .....++++...+. .+.++++.++..++++++.+.|++. |++
T Consensus 319 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 396 (475)
T 3k40_A 319 SWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG--VENLQAHIRRHCNFAKQFGDLCVADSRFE 396 (475)
T ss_dssp GGC---------------------------CCCGGGTHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred HHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 32 2221110000 00 0 11233444444443 4567888899999999999999987 888
Q ss_pred eecCCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEECC
Q 013883 391 VFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+..+....++++.+.+.+ ....++.++|.++.++.+.|+
T Consensus 397 l~~~~~~~iv~f~~~~~~-~~~~~l~~~L~~~g~~~~~~~ 435 (475)
T 3k40_A 397 LAAEINMGLVCFRLKGSN-ERNEALLKRINGRGHIHLVPA 435 (475)
T ss_dssp ESSCCBTTEEEEEESSCH-HHHHHHHHHHHHHTSCBCEEE
T ss_pred EecCCceEEEEEEeCCch-HHHHHHHHHHHhCCcEEEEee
Confidence 875544445555553311 135678888887755555553
No 225
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.81 E-value=1.3e-18 Score=185.22 Aligned_cols=225 Identities=14% Similarity=0.087 Sum_probs=150.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCC
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPD 227 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~ 227 (434)
+.++++.++++++ . +..+++++|+++++..++.+++++||.|+++.|.|.++...+...|++++.++.+.++
T Consensus 207 v~~~ee~la~l~G------~--d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~ 278 (755)
T 2vyc_A 207 FGESEKYAARVFG------A--DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNR 278 (755)
T ss_dssp HHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCT
T ss_pred HHHHHHHHHHHhC------C--CceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCc
Confidence 3466677776665 2 2268899999999999999999999999999999999999899999999999876433
Q ss_pred CC----C-----CHHHHHhhccc--CCc--------EEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCcc-
Q 013883 228 FA----I-----PIEELKSTISK--NTR--------AILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKL- 287 (434)
Q Consensus 228 ~~----~-----d~~~l~~~i~~--~~~--------~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~- 287 (434)
++ + |++.+++++++ +++ ++++++| ||+|.+.+ +++|+++|++||+++|+||+|...
T Consensus 279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~ 354 (755)
T 2vyc_A 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_dssp TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhc
Confidence 33 5 99999999865 344 8888998 79999985 677999999999999999999753
Q ss_pred ccCCC---CccccC--CCCCCCceEEEccCChhhccccce-eeeEEeChh---h-HHHHHHHh-hccccCCchHHHHHHH
Q 013883 288 AFEMD---HISIAS--LPGMYERTVTMNSLGKTFSLTGWK-IGWAIAPPH---L-TWGVRQAH-SFLTFATSTPMQWAAT 356 (434)
Q Consensus 288 ~~~~~---~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R-~G~~~~~~~---~-~~~l~~~~-~~~~~~~~~~~q~a~~ 356 (434)
.+++. ...+.. .+...++++++.|++|.+ +|.+ .|+++.+.+ + ...+.... .....+++.+...++.
T Consensus 355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~ 432 (755)
T 2vyc_A 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASND 432 (755)
T ss_dssp GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHH
T ss_pred ccCcccCCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 23321 112211 111235778999999986 4666 567777544 2 23333322 2223444444444433
Q ss_pred HHHhCC-hHHHHHHHHHHHHHHHHHHHHhhh
Q 013883 357 AALRAP-ETYYEELKRDYSAKKAILVEGLNA 386 (434)
Q Consensus 357 ~~L~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 386 (434)
.+++.. .+..++..++..++.+.+++.|++
T Consensus 433 aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~ 463 (755)
T 2vyc_A 433 VAVSMMDGNSGLSLTQEVIDEAVDFRQAMAR 463 (755)
T ss_dssp HHHHHHSTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 344311 111233444444455555555544
No 226
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.76 E-value=1.8e-17 Score=173.84 Aligned_cols=228 Identities=11% Similarity=0.081 Sum_probs=154.1
Q ss_pred CCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEE
Q 013883 143 ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCIT 222 (434)
Q Consensus 143 ~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~ 222 (434)
.+..-+.++++.+|++++ .++.+++++|++.++..++.+++++||+|+++.++|.++...+...|++++.++
T Consensus 192 ~~~g~i~eaE~~lA~~fG--------a~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~ 263 (715)
T 3n75_A 192 DHSGPHKEAEQYIARVFN--------ADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFR 263 (715)
T ss_dssp TTBTHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEEC
T ss_pred CCcHHHHHHHHHHHHHhC--------CCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEe
Confidence 333335688899999887 333678889989999999999999999999999999999999999999999998
Q ss_pred cCCCCCCC---------CHHHHHhhccc--CCc---EEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 223 LRPPDFAI---------PIEELKSTISK--NTR---AILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 223 ~~~~~~~~---------d~~~l~~~i~~--~~~---~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
.+.+++++ |++.+++++++ +++ ++++++| ||+|.+.+. ++|+++|+++ .+|+||||....
T Consensus 264 ~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl---~~I~ela~~~--~livDEAH~~~~ 337 (715)
T 3n75_A 264 PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNT---DFIKKTLDVK--SIHFDSAWVPYT 337 (715)
T ss_dssp CCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECH---HHHHHHCCCS--EEEEECTTCTTG
T ss_pred ccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCH---HHHHHHhCcC--cEEEcccccccc
Confidence 76444553 89999999975 334 7999999 999999965 5577777665 379999998653
Q ss_pred -cCCCCccccCCCC--CCCce-EEEccCChhhccccc-eeeeEEeChhh-HHHHHHHhhccc-cCCchHHHHHHHHHHhC
Q 013883 289 -FEMDHISIASLPG--MYERT-VTMNSLGKTFSLTGW-KIGWAIAPPHL-TWGVRQAHSFLT-FATSTPMQWAATAALRA 361 (434)
Q Consensus 289 -~~~~~~~~~~~~~--~~~~~-i~i~S~SK~~g~~G~-R~G~~~~~~~~-~~~l~~~~~~~~-~~~~~~~q~a~~~~L~~ 361 (434)
|++.......+.. ..+.+ ++++|++|.++ |+ ..|+++++.++ ...++....... .+++.+..+++..+++.
T Consensus 338 ~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~ 415 (715)
T 3n75_A 338 NFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAM 415 (715)
T ss_dssp GGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHH
T ss_pred ccCCccccccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHH
Confidence 4432221222211 12333 56999999975 43 36888887653 233444443333 33444444444444432
Q ss_pred Ch-HHHHHHHHHHHHHHHHHHHHhhh
Q 013883 362 PE-TYYEELKRDYSAKKAILVEGLNA 386 (434)
Q Consensus 362 ~~-~~~~~~~~~~~~~~~~l~~~L~~ 386 (434)
-+ +.-+++++++.++.+.+++.|++
T Consensus 416 ~~~~~g~~~~~~l~~~a~~~r~~L~~ 441 (715)
T 3n75_A 416 MKGNAGKRLINGSIERAIKFRKEIKR 441 (715)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 11 12234455556666666666554
No 227
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.75 E-value=1e-17 Score=167.62 Aligned_cols=301 Identities=16% Similarity=0.133 Sum_probs=185.5
Q ss_pred cCCeeEeCCCC--CCCC-CcHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH
Q 013883 108 KHGAINLGQGF--PNFD-GPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIA 184 (434)
Q Consensus 108 ~~~~i~l~~g~--p~~~-~~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~ 184 (434)
+...|||..|+ ..+. .+|.+.+++.++++...+...+..-..+|.+.+++.+. ..+ .+++++++++|+.
T Consensus 86 G~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~~~~~~~~lae~l~~~~p-------~~~-~v~f~~SGsEA~e 157 (454)
T 4ao9_A 86 GHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTGHNLLEGRLARLICERFP-------QIE-QLRFTNSGTEANL 157 (454)
T ss_dssp CCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCSEESSHHHHHHHHHHHST-------TCS-EEEEESSHHHHHH
T ss_pred CCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccCCcHHHHHHHHHHHHhCC-------CCC-EEEEeCchHHHHH
Confidence 34578886652 2222 46889999999988754433333333455555555432 134 7999999999999
Q ss_pred HHHHHcc--CCCCeEEEcCCCchhHHHHHHH------cCCEEEEEEcCCCCCCCCHHHHHhhccc---CCcEEEecCCCC
Q 013883 185 ATILGLI--NPGDEVILFAPFYDSYEATLSM------AGAKIKCITLRPPDFAIPIEELKSTISK---NTRAILMNTPHN 253 (434)
Q Consensus 185 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~------~G~~~~~v~~~~~~~~~d~~~l~~~i~~---~~~~i~~~~p~N 253 (434)
.+++... ...++|+..+.+|++....+.. .......+|++ |++.+++.+.+ ++.+|++.....
T Consensus 158 ~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~n------d~~~l~~~l~~~~~~iAavIvEPv~g 231 (454)
T 4ao9_A 158 MALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYN------DAQTARAQIERHGPEIAVVLVEPMQG 231 (454)
T ss_dssp HHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTT------CHHHHHHHHHHTGGGEEEEEECSEES
T ss_pred HHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCCc------hHHHHHHHHhhcCCceEEEEeccccC
Confidence 9987653 2346888888888875432111 11234444443 78888888864 456666654466
Q ss_pred CcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhh
Q 013883 254 PTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL 332 (434)
Q Consensus 254 PTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~ 332 (434)
..|.+ ++++.+++|.++|++||+++|+||++.+ ..+.......+.-.+| +.+++|.+| .|+.+|.+++++++
T Consensus 232 ~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a~e~~gv~PD----i~t~gK~lg-gG~Piga~~~~~ei 304 (454)
T 4ao9_A 232 ASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHGLANKLGIRSD----LTTLGKYIG-GGMSFGAFGGRADV 304 (454)
T ss_dssp TTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTCHHHHHTCCCS----EEEEEGGGG-TTSSCEEEEECHHH
T ss_pred CCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccccchhccCCCCc----EEEeccccC-CCCcceeeeeHHHH
Confidence 67765 4677799999999999999999999974 2233222222222334 557899999 89999999999999
Q ss_pred HHHHHHHh----hccccCCchHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhhhCCCEe-ecCCeeEEEeeecC
Q 013883 333 TWGVRQAH----SFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKV-FPSSGTYFVVVDHT 405 (434)
Q Consensus 333 ~~~l~~~~----~~~~~~~~~~~q~a~~~~L~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~ 405 (434)
++.+.... ...+++.++.+..++.+.|+.. ++.++++.+.-+..++.|.+.+++.++.. +...|.|+. +.+.
T Consensus 305 ~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~g-i~f~ 383 (454)
T 4ao9_A 305 MALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMN-AHFV 383 (454)
T ss_dssp HGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEE-EESC
T ss_pred HHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEE-EEEe
Confidence 87664321 2346788888888888888753 33334433333333444444444444322 223344432 2221
Q ss_pred CCCC--------CC---HHHHHHHHHHhcCeEEECCC
Q 013883 406 PFGH--------ET---DIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 406 ~~~~--------~~---~~~~~~~Ll~~~GV~v~pG~ 431 (434)
+.+. .+ ...++..|+++ ||++.|..
T Consensus 384 ~~~~~~~~~~~~~d~~~~~~~~~~ll~~-Gv~~~p~~ 419 (454)
T 4ao9_A 384 QGDVRSSEDLAAVDGRLRQLLFFHLLNE-DIYSSPRG 419 (454)
T ss_dssp CSCCCSGGGGTTCCHHHHHHHHHHHHHT-TEECCTTC
T ss_pred cCCCCCHHHHHhhhHHHHHHHHHHHHHC-CEEEcCCC
Confidence 1110 01 13466667765 99998853
No 228
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.66 E-value=8.2e-16 Score=150.49 Aligned_cols=286 Identities=12% Similarity=0.055 Sum_probs=184.8
Q ss_pred CCCCCcHHHHHHHHHHHHcCC----CCCC-CCCC------cHHHHHHHHHHHHhhcCCCCCCCCcEEE-cCChHHHHHHH
Q 013883 119 PNFDGPDFVKDAAIQAIRDGK----NQYA-RGHG------VPEFNSAIASRFKKDSGLEVDPEKEVTV-TSGCTEAIAAT 186 (434)
Q Consensus 119 p~~~~~~~v~~~~~~~~~~~~----~~Y~-~~~G------~~~lr~~ia~~l~~~~g~~~~~~~~i~~-t~G~~~ai~~~ 186 (434)
-..+.|+.|.+++.+.+.+.. ..+. ...+ +.+.|+.++++++ .+++.+|++ ++|+++++.++
T Consensus 20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~a 93 (377)
T 3e77_A 20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA------VPDNYKVIFLQGGGCGQFSAV 93 (377)
T ss_dssp CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEEEESSHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCCeEEEEcCchHHHHHHH
Confidence 346678889988887765310 1010 1112 2345555555554 333226887 68999999999
Q ss_pred HHHccCC--CCeEEEcCCCchhH--HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHH
Q 013883 187 ILGLINP--GDEVILFAPFYDSY--EATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTRE 262 (434)
Q Consensus 187 ~~~l~~~--gd~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e 262 (434)
+..++.+ ||+|++..-.+... ...++..|..++.++.+. ++..+++.++.++++++++|.+++..|.||++.|.
T Consensus 94 ~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~-~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi- 171 (377)
T 3e77_A 94 PLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLG-SYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF- 171 (377)
T ss_dssp HHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCS-SSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS-
T ss_pred HHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCC-CcCCCCChHHhccCCCccEEEEeCccCchheEchh-
Confidence 9999865 89988777666554 234556787777666653 45667777888888899999998888889999874
Q ss_pred HHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHH------
Q 013883 263 ELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV------ 336 (434)
Q Consensus 263 ~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l------ 336 (434)
+|+++|+++++|.++.... ....+..+ + +++.|..|.+|.+| +|+++.++++++.+
T Consensus 172 -------i~~~~~~~~~vD~~q~~g~---~~id~~~~----~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~ 233 (377)
T 3e77_A 172 -------IPDVKGAVLVCDMSSNFLS---KPVDVSKF----G--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPS 233 (377)
T ss_dssp -------CCCCTTCCEEEECTTTTTS---SCCCGGGC----S--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCG
T ss_pred -------hhccCCCEEEEEcccccCC---CCCchhhc----C--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCc
Confidence 3678999999999997632 22222222 2 46788899999778 78888876553211
Q ss_pred ----HHH--hhccccCCchHHHHHHHHHHhCCh-H-HHHHHHHHHHHHHHHHHHHhhhC-CCEeecC----CeeEEEeee
Q 013883 337 ----RQA--HSFLTFATSTPMQWAATAALRAPE-T-YYEELKRDYSAKKAILVEGLNAV-GFKVFPS----SGTYFVVVD 403 (434)
Q Consensus 337 ----~~~--~~~~~~~~~~~~q~a~~~~L~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~~~ 403 (434)
... ......+++....+++..+|+... . .++.+.++.++..+++++.|+++ |+.+.+. ..+..+-+.
T Consensus 234 ~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~ 313 (377)
T 3e77_A 234 VLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR 313 (377)
T ss_dssp GGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEE
T ss_pred hhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEE
Confidence 111 112234566666666767776432 2 47888889999999999999987 7774331 223333344
Q ss_pred cCCCCCCC--HHHHHHHHHHhcCeEEECCC
Q 013883 404 HTPFGHET--DIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 404 ~~~~~~~~--~~~~~~~Ll~~~GV~v~pG~ 431 (434)
++....+. +..+...|. ++||.+.+|.
T Consensus 314 ~~~~~~~~~~~~~~l~~l~-~~Gi~~~~g~ 342 (377)
T 3e77_A 314 IGNAKGDDALEKRFLDKAL-ELNMLSLKGH 342 (377)
T ss_dssp ESSTTCCHHHHHHHHHHHH-HTTEESCBCC
T ss_pred cCCCCCchhHHHHHHHHHH-HCCcEEeCCC
Confidence 43211100 134556554 5699998884
No 229
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.66 E-value=2.3e-15 Score=151.16 Aligned_cols=308 Identities=15% Similarity=0.149 Sum_probs=187.1
Q ss_pred cCCeeEeCCC--CCCCC-CcHHHHHHHHHHHHcCCC---CCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH
Q 013883 108 KHGAINLGQG--FPNFD-GPDFVKDAAIQAIRDGKN---QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTE 181 (434)
Q Consensus 108 ~~~~i~l~~g--~p~~~-~~~~v~~~~~~~~~~~~~---~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ 181 (434)
+...||+..| ...+. .+|.+.+++.+++....+ .+.+. +...++++.+.+..... ..+ .+++++++++
T Consensus 63 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~----~~~~~lae~L~~~~p~~-~~~-~v~f~~sGsE 136 (456)
T 4atq_A 63 GNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVTPY----EGYVAVTEQLNRLTPGD-HAK-RTVLFNSGAE 136 (456)
T ss_dssp SCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCC----HHHHHHHHHHHHHSSCS-SCE-EEEEESSHHH
T ss_pred CCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCccCc----HHHHHHHHHHHHhCCCC-CCc-EEEEeCChHH
Confidence 3356887655 23333 367888899888876422 11121 33344555555443211 123 6889999999
Q ss_pred HHHHHHHHcc--CCCCeEEEcCCCchhHHHHHHH-cC-------------CEEEEEEcCCC----C-CCCCHHHHHhh--
Q 013883 182 AIAATILGLI--NPGDEVILFAPFYDSYEATLSM-AG-------------AKIKCITLRPP----D-FAIPIEELKST-- 238 (434)
Q Consensus 182 ai~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~G-------------~~~~~v~~~~~----~-~~~d~~~l~~~-- 238 (434)
|++.+++... ...++|+.....|++....... .+ ..+..+|+... . ...+.+.+++.
T Consensus 137 A~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 216 (456)
T 4atq_A 137 AVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAIT 216 (456)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHH
Confidence 9999987652 3457888889988886543322 11 23455554321 1 11123333332
Q ss_pred -----ccc-CCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEcc
Q 013883 239 -----ISK-NTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNS 311 (434)
Q Consensus 239 -----i~~-~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S 311 (434)
+.. +..+|++...+.-.|.+ ++++.+++|.++|++||+++|+||++.+|...|.......+.-.+| +-+
T Consensus 217 ~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PD----ivt 292 (456)
T 4atq_A 217 MIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPD----IIT 292 (456)
T ss_dssp HHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCS----EEE
T ss_pred HHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCc----hhh
Confidence 223 45566665446666764 5667799999999999999999999999877776665555544455 557
Q ss_pred CChhhccccceeeeEEeChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhh----C
Q 013883 312 LGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNA----V 387 (434)
Q Consensus 312 ~SK~~g~~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~----~ 387 (434)
++|.+| .|+.+|.+++++++.+.+.......+|+.++.+..++.+.|+..++ +++.++.++.-+++.+.|++ +
T Consensus 293 ~gK~lg-gg~P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~ 369 (456)
T 4atq_A 293 MAKGIA-GGLPLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQ--HDLNGRARHIEELALGKLRELAAEL 369 (456)
T ss_dssp ECGGGG-TTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhccc-CcCCceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 899998 8999999999999887776555567899999999999888875321 12233334444444444433 2
Q ss_pred C---CEe---ecCCeeEEEeeecCCCC-CCC----HHHHHHHHHHhcCeEEECC
Q 013883 388 G---FKV---FPSSGTYFVVVDHTPFG-HET----DIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 388 g---~~~---~~~~~~~~~~~~~~~~~-~~~----~~~~~~~Ll~~~GV~v~pG 430 (434)
. ..+ +... |+++-+++.... ... ...++.+++++ ||++.++
T Consensus 370 ~~~~~~~v~~VRG~-Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~-Gvl~~~~ 421 (456)
T 4atq_A 370 SAGGGSVVGDIRGR-GAMLAIELVQPGSKEPNAELTKAVAAACLKE-GVIILTC 421 (456)
T ss_dssp C-----CEEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHHHT-TEECEEE
T ss_pred ccccCCceEEeeec-ceEEEEEEecCCCCCcCHHHHHHHHHHHHHC-CCEEEec
Confidence 2 122 2223 334444442211 111 23566677665 9998764
No 230
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.63 E-value=1.4e-14 Score=145.97 Aligned_cols=310 Identities=15% Similarity=0.117 Sum_probs=187.6
Q ss_pred cCCeeEeCCCCCC--CC-CcHHHHHHHHHHHHcCCCCCCCCCC-cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH
Q 013883 108 KHGAINLGQGFPN--FD-GPDFVKDAAIQAIRDGKNQYARGHG-VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAI 183 (434)
Q Consensus 108 ~~~~i~l~~g~p~--~~-~~~~v~~~~~~~~~~~~~~Y~~~~G-~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai 183 (434)
+...||+..|.-. +. .+|.+.+++.+++.+.. .|....+ ..+....+++.|.+..+.. .+ .+++++++++|+
T Consensus 66 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~-~~~~~~~~~~~~~~~lAe~L~~~~p~~--~~-~v~f~~sGsEA~ 141 (473)
T 4e3q_A 66 GRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFP-GYHAFFGRMSDQTVMLSEKLVEVSPFD--SG-RVFYTNSGSEAN 141 (473)
T ss_dssp CCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCC-CCCCCTTEEEHHHHHHHHHHHHHSSCS--SC-EEEEESSHHHHH
T ss_pred CCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcc-cccccccccCHHHHHHHHHHHhhCCCC--cc-EEEEeCchHHHH
Confidence 3457898776322 22 36888889988887642 2222222 2344555777776655432 34 799999999999
Q ss_pred HHHHHHcc-------CCC-CeEEEcCCCchhHHHHHHH-cC-----------CEEEEEEcCC-----CCCCC-------C
Q 013883 184 AATILGLI-------NPG-DEVILFAPFYDSYEATLSM-AG-----------AKIKCITLRP-----PDFAI-------P 231 (434)
Q Consensus 184 ~~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~-~G-----------~~~~~v~~~~-----~~~~~-------d 231 (434)
+.+++... .++ .+|+.....|++....... .| .....++... ..... .
T Consensus 142 e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 221 (473)
T 4e3q_A 142 DTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARL 221 (473)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHH
Confidence 99987642 233 5688888888874433222 22 1123333221 01111 1
Q ss_pred HHHHHhhccc----CCcEEEecCCCCCcccC-CCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCce
Q 013883 232 IEELKSTISK----NTRAILMNTPHNPTGKM-FTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERT 306 (434)
Q Consensus 232 ~~~l~~~i~~----~~~~i~~~~p~NPTG~~-~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~ 306 (434)
.+++++.+.. +..+|++...+.-.|++ ++++.+++|.++|++||+++|+||++.+|...|.......+.-.+|
T Consensus 222 ~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PD-- 299 (473)
T 4e3q_A 222 ARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPD-- 299 (473)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCS--
T ss_pred HHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCC--
Confidence 2344444432 34555555446667775 4567799999999999999999999999977776655544444445
Q ss_pred EEEccCChhhcccc-ceeeeEEeChhhHHHHHHHh-------hccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 013883 307 VTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAH-------SFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKA 378 (434)
Q Consensus 307 i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~~-------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 378 (434)
+.+++|.++ .| +.+|.+++++++.+.+.... ...+|+.++.+.+++.+.|+..++ +++.++.+++-+
T Consensus 300 --i~t~~K~l~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~--~~l~~~~~~~g~ 374 (473)
T 4e3q_A 300 --AIISSKNLT-AGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMN--EGLAENVRRLAP 374 (473)
T ss_dssp --EEEECGGGG-TTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHH--SSHHHHHHHHHH
T ss_pred --hHHhccccc-CCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhcc--ccHHHHHHHHHH
Confidence 557899998 66 89999999999988775432 234788888888888888874211 123344444555
Q ss_pred HHHHHhhhC----CCEeecCCeeEEEeeecCCC-----CC----CCHHHHHHHHHHhcCeEEECC
Q 013883 379 ILVEGLNAV----GFKVFPSSGTYFVVVDHTPF-----GH----ETDIAFCEYLIKEVGVVAIPT 430 (434)
Q Consensus 379 ~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~Ll~~~GV~v~pG 430 (434)
+|.+.|+++ .+.-+...|.| +-+.+... .. .....+...++++ ||++.|.
T Consensus 375 ~l~~~L~~l~~~~~v~~vRG~Gl~-~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~ 437 (473)
T 4e3q_A 375 RFEERLKHIAERPNIGEYRGIGFM-WALEAVKDKASKTPFDGNLSVSERIANTCTDL-GLICRPL 437 (473)
T ss_dssp HHHHHHHHHTTSTTEEEEEEETTE-EEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECEEE
T ss_pred HHHHHHHHHhcCCCeeEEeecceE-EEEEEecCccccccccccHHHHHHHHHHHHHC-CcEEEec
Confidence 555555442 33223333433 33333211 01 1134577777655 9998773
No 231
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.63 E-value=2e-15 Score=148.41 Aligned_cols=282 Identities=12% Similarity=0.028 Sum_probs=178.2
Q ss_pred CCcHHHHHHHHHHHHcC----C-----CCCCC--CCCcHHHHHHHHHHHHhhcCCCCCCCCcEEE-cCChHHHHHHHHHH
Q 013883 122 DGPDFVKDAAIQAIRDG----K-----NQYAR--GHGVPEFNSAIASRFKKDSGLEVDPEKEVTV-TSGCTEAIAATILG 189 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~----~-----~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~-t~G~~~ai~~~~~~ 189 (434)
+.++.|++++.+.+.+. . ....+ ..-+.+.|+.++++++ .+.+.+|++ |+|+|+++.+++..
T Consensus 37 ~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~ai~~ 110 (386)
T 3qm2_A 37 MLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLN------IPSNYKVLFCHGGGRGQFAGVPLN 110 (386)
T ss_dssp CCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHT------CCTTEEEEEEESCTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEEcCCchHHHHHHHHh
Confidence 34677777776554321 0 00011 1245678888888887 432226887 68999999999999
Q ss_pred ccCCCCeEEEcCCCchhH--HHHHHHcCCEEEEEEcC--CCCCCCCHHHHHhhcccCCcEEEecCCCCCcccC-CCHHHH
Q 013883 190 LINPGDEVILFAPFYDSY--EATLSMAGAKIKCITLR--PPDFAIPIEELKSTISKNTRAILMNTPHNPTGKM-FTREEL 264 (434)
Q Consensus 190 l~~~gd~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~--~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~-~~~e~l 264 (434)
++.+||+|++..-.+..+ ...++..| ++..++.+ +.+..++++.++.++++++++|.+++..|.||+. .+.++
T Consensus 111 l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~- 188 (386)
T 3qm2_A 111 LLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPD- 188 (386)
T ss_dssp HCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCCC-
T ss_pred ccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchhh-
Confidence 999999987655544443 23345678 88888887 3233367888888899999999988888888996 55433
Q ss_pred HHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHHHH--------
Q 013883 265 NVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV-------- 336 (434)
Q Consensus 265 ~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~~l-------- 336 (434)
|. +|+++++|.++.... .+..+..+ + +.+.|..|.+|.+| +|+++.++++++.+
T Consensus 189 --i~-----~g~~~~vDa~qs~g~---~pidv~~~----~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~ 250 (386)
T 3qm2_A 189 --FG-----PEVVVTADFSSTILS---APLDVSRY----G--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSIL 250 (386)
T ss_dssp --CC-----TTCCEEEECTTTTTS---SCCCGGGC----S--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGG
T ss_pred --hc-----CCCEEEEEcccccCC---CCCCcccc----C--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHH
Confidence 42 799999999987532 22233322 2 45688999999777 89999877653211
Q ss_pred --HHH--hhccccCCchHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHhhhCCCEee--cC--CeeEEEeeecCC
Q 013883 337 --RQA--HSFLTFATSTPMQWAATAALRAPET--YYEELKRDYSAKKAILVEGLNAVGFKVF--PS--SGTYFVVVDHTP 406 (434)
Q Consensus 337 --~~~--~~~~~~~~~~~~q~a~~~~L~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~--~~~~~~~~~~~~ 406 (434)
... ......+++.+..+++..+|+...+ .+++..++.++.++++++.|+++|+-.. .+ .....+-+.++.
T Consensus 251 ~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~ 330 (386)
T 3qm2_A 251 DYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLAD 330 (386)
T ss_dssp CHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESS
T ss_pred HHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCC
Confidence 111 1112235566666666666664333 3778888899999999999998876221 11 222333344432
Q ss_pred CCCCCHHHHHHHHHHhcCeEEECCCC
Q 013883 407 FGHETDIAFCEYLIKEVGVVAIPTSV 432 (434)
Q Consensus 407 ~~~~~~~~~~~~Ll~~~GV~v~pG~~ 432 (434)
.+. +.++..+| +++||.+.+|..
T Consensus 331 ~~~--~~~~~~~L-~~~gI~~~~g~~ 353 (386)
T 3qm2_A 331 NTL--DKVFLEES-FAAGLHALKGHR 353 (386)
T ss_dssp GGG--HHHHHHHH-HHTTEECCBCCT
T ss_pred ccc--cHHHHHHH-HHCCCEEeCCCC
Confidence 122 35666665 567999988853
No 232
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.62 E-value=1.5e-14 Score=141.19 Aligned_cols=265 Identities=18% Similarity=0.131 Sum_probs=174.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCC--cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH--------HHHcCC-
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEK--EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT--------LSMAGA- 216 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~--~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~--------~~~~G~- 216 (434)
+.++.....++..+.+|.+... + +|..-+| +.|...++.++++|||+|+-.+....+|... +...|.
T Consensus 98 vD~iE~la~~rak~lF~a~~A~-w~VNVQP~SG-s~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~ 175 (490)
T 3ou5_A 98 VDEIELLCQRRALEAFDLDPAQ-WGVNVQPYSG-SPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIF 175 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTT-EEEECCCSSH-HHHHHHHHHHHCC-CCCEECBC------------------------
T ss_pred HHHHHHHHHHHHHHHhCCCccc-cCCCCCcCCH-HHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCccccccccc
Confidence 4456666666677777765321 1 2444455 7888889999999999999999888776432 122232
Q ss_pred -EEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCC-ccccCCCC
Q 013883 217 -KIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYD-KLAFEMDH 293 (434)
Q Consensus 217 -~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~-~~~~~~~~ 293 (434)
+.+.++++++++.+|.|.+++.... ++|+|+.-.-.+|-= + +++++.++|++.|.++++|.+|. +++-+|-.
T Consensus 176 ~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~SaY~r~--i---d~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~ 250 (490)
T 3ou5_A 176 FESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARL--I---DYARMREVCDEVKAHLLADMAHISGLVAAKVI 250 (490)
T ss_dssp ----CBCEETTTTEECHHHHHHHHHHHCCSEEEECCSSCCSC--C---CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSS
T ss_pred ccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCccCccc--c---CHHHHHHHHhhcccEEEechhhhhhhhccccc
Confidence 3444555667888999999998766 899998865555543 3 47788888999999999999985 44444444
Q ss_pred ccccCCCCCCCceEEEccCChhhccccceeeeEEeCh---------------hhHHHHHHHhhccccCCchHHHHHHHH-
Q 013883 294 ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP---------------HLTWGVRQAHSFLTFATSTPMQWAATA- 357 (434)
Q Consensus 294 ~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~q~a~~~- 357 (434)
++.... -.++..|..|+| .|.|.|.|.+++ ++.+.+...-....-+.+.....++.+
T Consensus 251 psP~~~-----ADvVTtTTHKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAV 323 (490)
T 3ou5_A 251 PSPFKH-----ADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAV 323 (490)
T ss_dssp CCGGGT-----CSEEEEESSSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHH
T ss_pred CCcccc-----ceEEeccccccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHH
Confidence 433322 237788999997 599999999865 466677766555444555554444433
Q ss_pred HHhC-ChHHHHHHHHHHHHHHHHHHHHhhhCCCEeec-CCeeEEEeeecCCCCCCCHHHHHHHHHHhcCeEEE
Q 013883 358 ALRA-PETYYEELKRDYSAKKAILVEGLNAVGFKVFP-SSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAI 428 (434)
Q Consensus 358 ~L~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~GV~v~ 428 (434)
++.. .....++...+..++.+.|.+.|.+.|++++. ...++.+++++.+.+. +. ..++++|++.||.+.
T Consensus 324 af~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~-tG-~~ae~~Le~agItvN 394 (490)
T 3ou5_A 324 ALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGL-DG-ARAERVLELVSITAN 394 (490)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTC-CH-HHHHHHHHHTTEECE
T ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCC-CH-HHHHHHHHHcCcEEC
Confidence 3433 23345677788888999999999999999874 3456678899877665 33 556677788999875
No 233
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.61 E-value=1.1e-14 Score=141.89 Aligned_cols=287 Identities=13% Similarity=0.100 Sum_probs=181.9
Q ss_pred CeeEeCCCCCCCCCcHHHHHHHHHHHHcC----CCCCC-CCCC------cHHHHHHHHHHHHhhcCCCCCCCCcEEE-cC
Q 013883 110 GAINLGQGFPNFDGPDFVKDAAIQAIRDG----KNQYA-RGHG------VPEFNSAIASRFKKDSGLEVDPEKEVTV-TS 177 (434)
Q Consensus 110 ~~i~l~~g~p~~~~~~~v~~~~~~~~~~~----~~~Y~-~~~G------~~~lr~~ia~~l~~~~g~~~~~~~~i~~-t~ 177 (434)
.+++|+-| | -+.++.|++++.+.+.+. ...|. ...+ +.+.|+.++++++ .+ ++. +|++ |+
T Consensus 5 ~~~~f~pg-p-t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~----~~-~~~-~v~f~t~ 76 (361)
T 3m5u_A 5 RKINFSAG-P-STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYE----LN-DDY-EVLFLQG 76 (361)
T ss_dssp CCEECCSS-S-CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHT----CC-TTE-EEEEESS
T ss_pred ceEeecCC-C-CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhC----CC-CCc-eEEEEcC
Confidence 45677655 2 345777888887766431 00010 0112 2345555566554 21 233 6887 99
Q ss_pred ChHHHHHHHHHHccCCCCeEEEcCCCchhH--HHHHHHcCCEEEEEEcCCCC-CCCCHHHHHhhcccCCcEEEecCCCCC
Q 013883 178 GCTEAIAATILGLINPGDEVILFAPFYDSY--EATLSMAGAKIKCITLRPPD-FAIPIEELKSTISKNTRAILMNTPHNP 254 (434)
Q Consensus 178 G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~~-~~~d~~~l~~~i~~~~~~i~~~~p~NP 254 (434)
|+++++.+++..++ +||++.+..-+...+ ...++..|+++..++.++.+ +.++++. + +++++++|.+++..|.
T Consensus 77 ~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~~~~e~~ 152 (361)
T 3m5u_A 77 GASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYICSNNTI 152 (361)
T ss_dssp HHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEEESEETT
T ss_pred cHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEEeCCCCC
Confidence 99999999999998 888763322223333 34456789999999988633 2245665 4 8889999999888888
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCccccCCCCCCCceEEEccCChhhccccceeeeEEeChhhHH
Q 013883 255 TGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 334 (434)
Q Consensus 255 TG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~~~~~~~ 334 (434)
||++.+. | ++ +|+++++|.++.... ....+. +-.+++.|..|.+|.+| +|+++.++++.+
T Consensus 153 tG~~~~~-----i---~~-~~~~~~vD~~q~~g~---~~id~~------~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~ 212 (361)
T 3m5u_A 153 YGTQYQN-----Y---PK-TKTPLIVDASSDFFS---RKVDFS------NIALFYGGVQKNAGISG--LSCIFIRKDMLE 212 (361)
T ss_dssp TTEECSS-----C---CC-CSSCEEEECGGGTTS---SCCCCT------TEEEEEEETTTTSSCTT--CEEEEEEHHHHH
T ss_pred cceeCCc-----c---cc-cCCEEEEEcccccCC---CCCCcc------cCCEEEEechhccCCCc--cEEEEEcHHHHh
Confidence 8998652 2 33 499999999987532 122222 12377889999999777 899999988876
Q ss_pred HHHH-----------H--hhccccCCchHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHhhhCC-C-EeecC---
Q 013883 335 GVRQ-----------A--HSFLTFATSTPMQWAATAALRAPET--YYEELKRDYSAKKAILVEGLNAVG-F-KVFPS--- 394 (434)
Q Consensus 335 ~l~~-----------~--~~~~~~~~~~~~q~a~~~~L~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~--- 394 (434)
.+.. . ......+++....+++..+|+...+ .++++.++.++.++++++.|++++ + ....+
T Consensus 213 ~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~ 292 (361)
T 3m5u_A 213 RSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKD 292 (361)
T ss_dssp HHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGG
T ss_pred hhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHH
Confidence 6542 1 1112345666666666666664222 367788888999999999999886 5 44321
Q ss_pred CeeEEEeeecCC-CCCCCHHHHHHHHHHhcCeEEECCC
Q 013883 395 SGTYFVVVDHTP-FGHETDIAFCEYLIKEVGVVAIPTS 431 (434)
Q Consensus 395 ~~~~~~~~~~~~-~~~~~~~~~~~~Ll~~~GV~v~pG~ 431 (434)
.....+-+.++. .+. +.++...| +++||.+.+|.
T Consensus 293 rs~~ivsf~~~~~~~~--~~~~~~~L-~~~gI~~~~g~ 327 (361)
T 3m5u_A 293 RSLMNVSFNIAKNKDL--EPLFVKEA-EEAGMIGLKGH 327 (361)
T ss_dssp BCSSEEEEEESSCTTH--HHHHHHHH-HHTTEECCBCC
T ss_pred cCCeEEEEECCCchhh--hHHHHHHH-HHCCCEEecCC
Confidence 122233333322 111 24566555 56799998884
No 234
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.53 E-value=1.6e-14 Score=154.94 Aligned_cols=297 Identities=12% Similarity=0.063 Sum_probs=174.3
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHcc-----CC-----
Q 013883 124 PDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLI-----NP----- 193 (434)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~-----~~----- 193 (434)
+|.+.+++.+++.+..+..... ...+...++++.|.+..+... .+ .+++++++++|++.+++..+ ..
T Consensus 399 ~p~i~~Ai~~Q~~~l~h~~~~~-~~~~~~~~Lae~L~~~~p~~~-l~-~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~ 475 (831)
T 4a0g_A 399 QAELAREMGYTAARFGHVMFPE-NVYEPALKCAELLLDGVGKGW-AS-RVYFSDNGSTAIEIALKMAFRKFCVDHNFCEA 475 (831)
T ss_dssp HHHHHHHHHHHHHHHSSCCCTT-EECHHHHHHHHHHHHTTTTTT-CC-EEEEESSHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred CHHHHHHHHHHHhhcccccccc-cCCHHHHHHHHHHHHhCCCCC-CC-EEEECCChhHHHHHHHHHHHHHHHhhcCCCcc
Confidence 6888899988877632211111 122444566777765543210 23 79999999999998887652 12
Q ss_pred -------CCeEEEcCCCchhHH-HHHHHcCCE---------------E-------------EEEEcCCCCC---------
Q 013883 194 -------GDEVILFAPFYDSYE-ATLSMAGAK---------------I-------------KCITLRPPDF--------- 228 (434)
Q Consensus 194 -------gd~Vlv~~p~y~~~~-~~~~~~G~~---------------~-------------~~v~~~~~~~--------- 228 (434)
..+|+...-.|++-. ..+...|.. + ..++... .+
T Consensus 476 ~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~-~~~~~~~~~~~ 554 (831)
T 4a0g_A 476 TEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPE-SFSEIAPEYGT 554 (831)
T ss_dssp ------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCT-TSCCCCSSTTE
T ss_pred ccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCc-ccccccccccc
Confidence 236888888887643 333333310 0 1122211 00
Q ss_pred CCC------------------HHHHHhhccc--------CCcEEEecCC-CCCcccCC-CHHHHHHHHHHHHHcCcEEEE
Q 013883 229 AIP------------------IEELKSTISK--------NTRAILMNTP-HNPTGKMF-TREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 229 ~~d------------------~~~l~~~i~~--------~~~~i~~~~p-~NPTG~~~-~~e~l~~i~~la~~~~~~iI~ 280 (434)
.-| .+.+++.+.+ ++.+|++... ++..|+.+ +++.+++|.++|++||+++|+
T Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~ 634 (831)
T 4a0g_A 555 FTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIF 634 (831)
T ss_dssp ESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred ccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEE
Confidence 001 2567777751 3455666543 68888754 788899999999999999999
Q ss_pred cCcCCccccCCCCccccCCCCCCCceEEEccCChhhcccc-ceeeeEEeChhhHHHHHHHh------hccccCCchHHHH
Q 013883 281 DEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAH------SFLTFATSTPMQW 353 (434)
Q Consensus 281 Deay~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~~~~~~~~~~~l~~~~------~~~~~~~~~~~q~ 353 (434)
||++.+|...|.......+.-.+| +.+++|.++ .| +++|++++++++.+.+.... ...+++.++.+++
T Consensus 635 DEV~tGfGRtG~~fa~e~~gv~PD----iitlsK~L~-gG~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~A 709 (831)
T 4a0g_A 635 DEVFTGFWRLGVETTTELLGCKPD----IACFAKLLT-GGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCA 709 (831)
T ss_dssp ECTTTTTTTTSBSSTHHHHSSCCS----EEEECGGGG-TTSSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHH
T ss_pred EcCccccccCCCchhhHhcCCCCc----EEEEecccc-cCccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHH
Confidence 999999877665443333322233 447999998 67 79999999999988765321 2346788888888
Q ss_pred HHHHHHhCC--hHHHHHHHHHHHHH----HHHHHHHhhhCC-CEeecCCeeEEEeeecCCC------CCCCHHHHHHHHH
Q 013883 354 AATAALRAP--ETYYEELKRDYSAK----KAILVEGLNAVG-FKVFPSSGTYFVVVDHTPF------GHETDIAFCEYLI 420 (434)
Q Consensus 354 a~~~~L~~~--~~~~~~~~~~~~~~----~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~Ll 420 (434)
++.++|+.. ++..+++.+..+.. ++.+.+.+.+.. +..+...|. ++.+.+... ......+++++|+
T Consensus 710 aala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl-~~~iel~~~~~~~~~~~~~a~~~~~~l~ 788 (831)
T 4a0g_A 710 TAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGT-LFALELKADASNSGYASLYAKSLLIMLR 788 (831)
T ss_dssp HHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETT-EEEEEEC---------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeeccc-EEEEEEecCccccccchHHHHHHHHHHH
Confidence 888877631 11112111111111 123444455543 333344444 444444221 0112346777776
Q ss_pred HhcCeEEECCC
Q 013883 421 KEVGVVAIPTS 431 (434)
Q Consensus 421 ~~~GV~v~pG~ 431 (434)
+ +||++.|+.
T Consensus 789 e-~Gv~v~p~g 798 (831)
T 4a0g_A 789 E-DGIFTRPLG 798 (831)
T ss_dssp H-TTEECCCBT
T ss_pred H-CCcEEEecC
Confidence 5 599998853
No 235
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.46 E-value=4.7e-13 Score=131.25 Aligned_cols=263 Identities=11% Similarity=0.080 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCC----CCeEEEcCCCchhHHHHHHHcCCEEEEEEcC-
Q 013883 150 EFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINP----GDEVILFAPFYDSYEATLSMAGAKIKCITLR- 224 (434)
Q Consensus 150 ~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~----gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~- 224 (434)
.|.+.++..+-+..|.+.. . ..++++|+|.++.+++.+.+++ ||.|+++...|.+....+...|++++.++..
T Consensus 116 ~ltn~l~ld~L~~~G~~~~-~-~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~ 193 (501)
T 3hl2_A 116 KITNSLVLDIIKLAGVHTV-A-NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVL 193 (501)
T ss_dssp HHHHHHHHHHHHHTTCTTC-C-EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEE
T ss_pred HHHHHHHHHHHHHcCCCCC-C-cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeee
Confidence 4555555444445587532 2 5899999997777776666653 4999999999999999999999999998762
Q ss_pred -CCCCCCCHHHHHhhcccC---CcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccc-cCCCCc-cccC
Q 013883 225 -PPDFAIPIEELKSTISKN---TRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLA-FEMDHI-SIAS 298 (434)
Q Consensus 225 -~~~~~~d~~~l~~~i~~~---~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~-~~~~~~-~~~~ 298 (434)
++..++|++.++++|++. .+++++.+|.+-.|.++ +++++|+++|++||+++++|+||.... +..+.+ ....
T Consensus 194 d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~--ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~ 271 (501)
T 3hl2_A 194 EGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP--DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGAR 271 (501)
T ss_dssp ETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC--CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHH
T ss_pred cccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccc--ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHh
Confidence 235788999999999762 33444444433223333 268889999999999999999998643 111100 1111
Q ss_pred CCCCCCceEEEccCChhhccccceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 013883 299 LPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKK 377 (434)
Q Consensus 299 ~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 377 (434)
+ +.-.+++.|..|++-++ +..|.+.. ++++++++..... .-....++.......+.-..+.++++.++..++.
T Consensus 272 ~---GrAD~vVqS~HK~llvp-IGG~ii~~~d~e~l~~~~~~yP--Gr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela 345 (501)
T 3hl2_A 272 V---GRIDAFVQSLDKNFMVP-VGGAIIAGFNDSFIQEISKMYP--GRASASPSLDVLITLLSLGSNGYKKLLKERKEMF 345 (501)
T ss_dssp H---SCCCEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHHTSC--SCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c---CCCcEEEecccccceee-cCceEEEeCCHHHHHHHHHhCC--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 12447899999998544 22233333 5666666533221 1122333333334444434556678888888888
Q ss_pred HHHHHHhhhC----CCEeecCC-eeEEEeeecCCCCCC---CHHHHHHHHHHh
Q 013883 378 AILVEGLNAV----GFKVFPSS-GTYFVVVDHTPFGHE---TDIAFCEYLIKE 422 (434)
Q Consensus 378 ~~l~~~L~~~----g~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~Ll~~ 422 (434)
++|++.|+++ |-++.... -...+.+.+...+.. ....+-..|..+
T Consensus 346 ~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r 398 (501)
T 3hl2_A 346 SYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTR 398 (501)
T ss_dssp HHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHHHhc
Confidence 8888888763 54444322 222233344333211 134555556544
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.45 E-value=5.1e-13 Score=132.43 Aligned_cols=236 Identities=12% Similarity=0.054 Sum_probs=150.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccC----CCCeEEEcCCCchhHHHHHHHcCCEEEEEEc
Q 013883 148 VPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLIN----PGDEVILFAPFYDSYEATLSMAGAKIKCITL 223 (434)
Q Consensus 148 ~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~----~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 223 (434)
...+.+.+..++.+..|.+-. . ..++++|+|.+..+++.+.++ +++.|+++..+|......+..+|+.++.++.
T Consensus 96 ~~~~e~~~~~~~~~~lGlp~~-~-~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~ 173 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVHSV-A-SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIEN 173 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCTTC-C-EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCCCC-c-eEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEe
Confidence 446777788888777786422 2 468888888444444444433 3899999999999999999999999988866
Q ss_pred C--CCCCCCCHHHHHhhccc---CCcEEEecCC-CCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCCccccCCCCcccc
Q 013883 224 R--PPDFAIPIEELKSTISK---NTRAILMNTP-HNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIA 297 (434)
Q Consensus 224 ~--~~~~~~d~~~l~~~i~~---~~~~i~~~~p-~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~~~~~~~~~~~~~ 297 (434)
. ++.+.+|++.++++|.+ +.+++++.+| .+.+|.+- ++++|+++|++||+++++|+||...........-.
T Consensus 174 ~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~d---dl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~ 250 (450)
T 3bc8_A 174 VLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPD---RLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQ 250 (450)
T ss_dssp EEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCC---CHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHH
T ss_pred eecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceec---CHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHH
Confidence 3 23578999999999966 2456666666 44455544 68889999999999999999998643211100001
Q ss_pred CCCCCCCceEEEccCChhhccccceeeeEEe-ChhhHHHHHHHhhccccCCchHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 013883 298 SLPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAK 376 (434)
Q Consensus 298 ~~~~~~~~~i~i~S~SK~~g~~G~R~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~ 376 (434)
.+. ...-..++.|..|++. .-.-.++++. +++.++++.... .......++...+...+....+.++++.++..++
T Consensus 251 a~~-~~~AD~~v~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~--~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~ 326 (450)
T 3bc8_A 251 GAR-VGRIDAFVQSLDKNFM-VPVGGAIIAGFNEPFIQDISKMY--PGRASASPSLDVLITLLSLGCSGYRKLLKERKEM 326 (450)
T ss_dssp HHH-HSCCCEEEEEHHHHHS-CCSSCEEEEESCHHHHHHHHHHS--CSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hhc-ccCCCEEEECCccCCC-chhccEEEEecCHHHHHHHHHHh--hcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 0122367899999986 3444677776 555655554321 1113334444444444433444556665555666
Q ss_pred HHHHHHHhhh----CCCEee
Q 013883 377 KAILVEGLNA----VGFKVF 392 (434)
Q Consensus 377 ~~~l~~~L~~----~g~~~~ 392 (434)
.+.+++.|++ .|..+.
T Consensus 327 a~~l~~~l~~~~~~~g~~~l 346 (450)
T 3bc8_A 327 FVYLSTQLKKLAEAHNERLL 346 (450)
T ss_dssp HHHHHHHHHHHHHHTTCCBC
T ss_pred HHHHHHHHHhhHHhcCceec
Confidence 6666666654 366554
No 237
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=84.63 E-value=5.1 Score=36.50 Aligned_cols=96 Identities=15% Similarity=0.111 Sum_probs=63.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-----CCcEE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-----NTRAI 246 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-----~~~~i 246 (434)
-+++|.|+...-..+...|.+.|-.|++.+-.-......++..|.+...+..|-. |.+.+++.++. +..=+
T Consensus 31 valVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~----~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 31 IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSA----NLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTT----CHHHHHHHHHHHHHHHSCEEE
T ss_pred EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 5666766666667778888999999988776666666777777888877776631 45666655533 22224
Q ss_pred EecCC-CCCccc--CCCHHHHHHHHHHH
Q 013883 247 LMNTP-HNPTGK--MFTREELNVIASLC 271 (434)
Q Consensus 247 ~~~~p-~NPTG~--~~~~e~l~~i~~la 271 (434)
+++|. .++.+. .++.|+|+++.++-
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 44444 333332 45889999998753
No 238
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=80.78 E-value=9.5 Score=33.72 Aligned_cols=95 Identities=16% Similarity=0.097 Sum_probs=60.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-..........|.++..+..|- -|.+.+++++.. +..+
T Consensus 8 ~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv----~~~~~v~~~~~~~~~~~g~id~ 83 (247)
T 3rwb_A 8 TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI----SDPGSVKALFAEIQALTGGIDI 83 (247)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCT----TCHHHHHHHHHHHHHHHSCCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCC----CCHHHHHHHHHHHHHHCCCCCE
Confidence 577777766666777788888998898877766666666666677777666553 145666655542 4566
Q ss_pred EEecCCCCCccc--CCCHHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~~l 270 (434)
++.+.-..+.+. ..+.++|+++.+.
T Consensus 84 lv~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 84 LVNNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 665433333322 4577888777653
No 239
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=78.99 E-value=16 Score=32.98 Aligned_cols=94 Identities=19% Similarity=0.163 Sum_probs=60.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-..........+.++..+..|-. |.+.+++++.. +..+
T Consensus 29 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~iD~ 104 (277)
T 4dqx_A 29 VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVS----SAKDAESMVEKTTAKWGRVDV 104 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTT----CHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 5677777666667777888889988888776655555666666777777776531 45666655542 4566
Q ss_pred EEecCCCCCccc--CCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
++.+.-..+.+. ..+.++|+++.+
T Consensus 105 lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 105 LVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHH
Confidence 655433333332 457788887665
No 240
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=77.23 E-value=14 Score=33.19 Aligned_cols=94 Identities=12% Similarity=0.060 Sum_probs=58.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-..........|.++..+..|-. |.+.+++++.. +..+
T Consensus 29 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~iD~ 104 (266)
T 3grp_A 29 KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLS----DRKSIKQLAEVAEREMEGIDI 104 (266)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTT----SHHHHHHHHHHHHHHHTSCCE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecC----CHHHHHHHHHHHHHHcCCCCE
Confidence 6777777666667777888889988888766655666666677878877776632 45666655542 4566
Q ss_pred EEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
++.+.-....+ ...+.++|+++.+
T Consensus 105 lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 105 LVNNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp EEECCCCC-----CCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 65543322222 2345666766654
No 241
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=77.21 E-value=12 Score=33.71 Aligned_cols=94 Identities=13% Similarity=0.064 Sum_probs=58.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.++||.|+...-..+...|.+.|..|++.+-.-..........|.++..+..|-. |.+.++++++. +..+
T Consensus 31 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 31 VAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVS----DEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp EEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTT----CHHHHHHHHHHHHHHHSSCCE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 5677766666666677788888988888766655555666666766666666531 45666555532 4566
Q ss_pred EEecCCCCCccc--CCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
++.+.-..+.+. ..+.++++++.+
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~ 132 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIA 132 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 655433322222 457788877654
No 242
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=76.89 E-value=17 Score=32.30 Aligned_cols=94 Identities=11% Similarity=0.087 Sum_probs=59.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-..........+.++..+..|-. |.+.+++++.. +..+
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 10 SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVT----RQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT----CHHHHHHHHHHHHHHSSSCCE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 5777777766667777888889988888776655566666666766766666531 45666655542 4566
Q ss_pred EEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
++.+.-..+.+ ...+.++|+++.+
T Consensus 86 lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 86 LVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHH
Confidence 66543332222 2347777776554
No 243
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=76.23 E-value=19 Score=32.25 Aligned_cols=94 Identities=17% Similarity=0.116 Sum_probs=58.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-...... +...|.++..+..|-. |.+.++++++. +
T Consensus 11 valVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~----~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 11 TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT----DELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT----CHHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC----CHHHHHHHHHHHHHHCCC
Confidence 567777766666777788889999999877654443333 4456778877766531 45555554432 3
Q ss_pred CcEEEecCC-CCCccc--CCCHHHHHHHHHH
Q 013883 243 TRAILMNTP-HNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 243 ~~~i~~~~p-~NPTG~--~~~~e~l~~i~~l 270 (434)
..+ +++|. .++.+. .++.|+|+++.++
T Consensus 87 iDi-LVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 87 VDI-LINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp CCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CcE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 344 44443 333332 4688999998764
No 244
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=73.63 E-value=14 Score=33.01 Aligned_cols=92 Identities=16% Similarity=0.098 Sum_probs=52.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-......+...+...+...+. |.+.+++++.. +..+
T Consensus 29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~------~~~~v~~~~~~~~~~~g~iD~ 102 (260)
T 3gem_A 29 PILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFS------CETGIMAFIDLLKTQTSSLRA 102 (260)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTT------SHHHHHHHHHHHHHHCSCCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCC------CHHHHHHHHHHHHHhcCCCCE
Confidence 67777776666677777888888777776544434444555566554433332 45666555532 4566
Q ss_pred EEecCCCC-CcccCCCHHHHHHHHH
Q 013883 246 ILMNTPHN-PTGKMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~N-PTG~~~~~e~l~~i~~ 269 (434)
++.+.-.. +.....+.++|+++.+
T Consensus 103 lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 103 VVHNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp EEECCCCCCCCCTTCHHHHHHHHHH
T ss_pred EEECCCccCCCCCCCCHHHHHHHHH
Confidence 66543222 2223445666666654
No 245
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=73.55 E-value=20 Score=31.42 Aligned_cols=93 Identities=9% Similarity=0.076 Sum_probs=52.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++..-.-..........|... +..|- -|.+.+++++.. +..+
T Consensus 7 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~D~----~~~~~~~~~~~~~~~~~g~id~ 80 (245)
T 1uls_A 7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP--VVMDV----ADPASVERGFAEALAHLGRLDG 80 (245)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEE--EECCT----TCHHHHHHHHHHHHHHHSSCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEE--EEecC----CCHHHHHHHHHHHHHHcCCCCE
Confidence 57777666666666777788889888876544343444444446443 33332 145666665543 4566
Q ss_pred EEecCCCCCcc--cCCCHHHHHHHHHH
Q 013883 246 ILMNTPHNPTG--KMFTREELNVIASL 270 (434)
Q Consensus 246 i~~~~p~NPTG--~~~~~e~l~~i~~l 270 (434)
++.+.-..+.+ ...+.++|+++.+.
T Consensus 81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 81 VVHYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 66543222222 23467777776653
No 246
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=73.40 E-value=14 Score=33.20 Aligned_cols=93 Identities=17% Similarity=0.133 Sum_probs=57.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++..-.-..........+.++..+..|-. |.+.+++++.. +..+
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~~~~~~~~~~~~~g~id~ 82 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVT----DGERIDVVAADVLARYGRVDV 82 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTT----CHHHHHHHHHHHHHHHSCCSE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCC----CHHHHHHHHHHHHHhCCCCCE
Confidence 5777777666666777788889988888766655666666666666766666531 45666655542 5566
Q ss_pred EEecCCCCCccc--CCCHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIA 268 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~ 268 (434)
++.+.-..+.+. ..+.++++++.
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~ 107 (281)
T 3m1a_A 83 LVNNAGRTQVGAFEETTERELRDLF 107 (281)
T ss_dssp EEECCCCEEECCTTTCCHHHHHHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHH
Confidence 665433322222 34666665543
No 247
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=73.17 E-value=21 Score=31.38 Aligned_cols=94 Identities=18% Similarity=0.090 Sum_probs=57.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|.+|++.+-.-.......+..+.+...+..|- -|.+.++++++. +..+
T Consensus 11 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv----~d~~~v~~~~~~~~~~~g~iD~ 86 (248)
T 3op4_A 11 VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV----TNPESIEAVLKAITDEFGGVDI 86 (248)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCT----TCHHHHHHHHHHHHHHHCCCSE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeC----CCHHHHHHHHHHHHHHcCCCCE
Confidence 577777766666777788888998888876655555555555555555566553 155666665542 4566
Q ss_pred EEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
++.+.-..+.+ ...+.++|+++.+
T Consensus 87 lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 87 LVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 66543322222 2347788877665
No 248
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=73.14 E-value=14 Score=32.79 Aligned_cols=94 Identities=13% Similarity=0.064 Sum_probs=49.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-..........+.++..+..|-. |.+.+++++.. +..+
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 9 VFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVT----NEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTT----CHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 5677777666667777788888988887655444444444445656666665531 45666655542 4556
Q ss_pred EEecCCCCCccc------CCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK------MFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG~------~~~~e~l~~i~~ 269 (434)
++.+.-..+.+. ..+.++|++..+
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
T 3tpc_A 85 LVNCAGTAPGEKILGRSGPHALDSFARTVA 114 (257)
T ss_dssp EEECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred EEECCCCCCCCccccccccCCHHHHHHHHH
Confidence 655432222221 356778877665
No 249
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=72.77 E-value=16 Score=31.91 Aligned_cols=95 Identities=16% Similarity=0.237 Sum_probs=56.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+......+...|.+.|..|++.+-.-..........+.++..+..|-. |.+.+++++.. +..+
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLA----HHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT----SHHHHHHHHHHHHHHHCSCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCC----CHHHHHHHHHHHHHhcCCCcE
Confidence 5677777666666677788888988888766655555555544545666665531 45556555432 4566
Q ss_pred EEecCCCCCccc--CCCHHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~~l 270 (434)
++.+.-..+.+. ..+.++|+++.+.
T Consensus 81 lvnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 81 VLHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp EEEECCCC------CCCHHHHHHHHHH
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHHH
Confidence 665433332222 3577888877663
No 250
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=72.50 E-value=27 Score=30.79 Aligned_cols=94 Identities=10% Similarity=0.099 Sum_probs=58.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-..........+.++..+..|-. |.+.++++++. +...
T Consensus 11 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 11 VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADIS----KEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT----SHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCC----CHHHHHHHHHHHHHhcCCCCE
Confidence 5777777666666777888888988888776666666666667777777776632 45555555432 4566
Q ss_pred EEecCCC-CCcc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPH-NPTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~-NPTG--~~~~~e~l~~i~~ 269 (434)
++.+.-. .+.+ ...+.+++++..+
T Consensus 87 li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 87 LVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp EEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred EEECCccCCCCCCcccCCHHHHHHHHH
Confidence 6654322 2122 2347777776654
No 251
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=72.39 E-value=19 Score=32.22 Aligned_cols=94 Identities=12% Similarity=0.085 Sum_probs=59.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-..... .++..|.++..+..|-. |.+.+++.++. +
T Consensus 9 valVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt----~~~~v~~~~~~~~~~~G~ 84 (254)
T 4fn4_A 9 VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS----KKKDVEEFVRRTFETYSR 84 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----SHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC----CHHHHHHHHHHHHHHcCC
Confidence 56666666666666677888899888887655444333 34557888888877632 45666655543 3
Q ss_pred CcEEEecCC--CCCcc--cCCCHHHHHHHHHH
Q 013883 243 TRAILMNTP--HNPTG--KMFTREELNVIASL 270 (434)
Q Consensus 243 ~~~i~~~~p--~NPTG--~~~~~e~l~~i~~l 270 (434)
..+ +++|. ..+.+ ..++.|+|+++.++
T Consensus 85 iDi-LVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 85 IDV-LCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp CCE-EEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred CCE-EEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 344 45554 23333 25688999988764
No 252
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=72.08 E-value=18 Score=32.03 Aligned_cols=95 Identities=13% Similarity=0.117 Sum_probs=58.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-.......+..|.++..+..|-. |.+.+++.+.. +..+
T Consensus 10 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 10 KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIA----DLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT----CHHHHHHHHHHHHHHHSSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCC----CHHHHHHHHHHHHHHhCCCCE
Confidence 6777777777667778888889988888776655566666666777777776632 45555554432 3344
Q ss_pred EEecCCCCCccc--CCCHHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~~l 270 (434)
++.+.-..+.+. ..+.++|++..++
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 444322222221 3477888877653
No 253
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=71.85 E-value=17 Score=32.39 Aligned_cols=95 Identities=18% Similarity=0.160 Sum_probs=57.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCC-chhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPF-YDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNT 250 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~-y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~ 250 (434)
.+++|.|+...-..+...|.+.|-.|++.+-. -......+...|.+...+..|-. |.+.+++.+.....=|+++|
T Consensus 11 valVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~----d~~~v~~~~~~g~iDiLVNN 86 (247)
T 4hp8_A 11 KALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA----DPLAAKDSFTDAGFDILVNN 86 (247)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT----STTTTTTSSTTTCCCEEEEC
T ss_pred EEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC----CHHHHHHHHHhCCCCEEEEC
Confidence 56666666666666778888999887775432 23345566778888888877632 22334444444322245555
Q ss_pred C-CCCcc--cCCCHHHHHHHHHH
Q 013883 251 P-HNPTG--KMFTREELNVIASL 270 (434)
Q Consensus 251 p-~NPTG--~~~~~e~l~~i~~l 270 (434)
. .++.+ ..++.|+|+++.++
T Consensus 87 AGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 87 AGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCCCCCcccccHHHHHHHHHH
Confidence 4 22222 25689999998875
No 254
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=71.85 E-value=35 Score=29.89 Aligned_cols=94 Identities=12% Similarity=0.071 Sum_probs=54.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCc-hhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFY-DSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTR 244 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~ 244 (434)
.+++|.|+...-..+...|.+.|..|++.+-.- ......++..|.++..+..|-. |.+.++++++. +..
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 9 LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS----QPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecC----CHHHHHHHHHHHHHHcCCCC
Confidence 577777666666677778888898877754333 3333344556767777766531 45666655432 456
Q ss_pred EEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 245 AILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 245 ~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+++.+.-..+.+ ...+.++++++.+
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (249)
T 2ew8_A 85 ILVNNAGIYPLIPFDELTFEQWKKTFE 111 (249)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 666543322222 2346777776654
No 255
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=71.57 E-value=9 Score=34.80 Aligned_cols=74 Identities=16% Similarity=0.138 Sum_probs=50.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--CCcEEEec
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK--NTRAILMN 249 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~~~i~~~ 249 (434)
.++||.|+...-..+...|.+.|-.|++..-.-..........+.++..+..|-. |.+.+++++.. +..+++.+
T Consensus 18 ~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~----d~~~v~~~~~~~~~iD~lv~n 93 (291)
T 3rd5_A 18 TVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQ----DLSSVRRFADGVSGADVLINN 93 (291)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTT----CHHHHHHHHHTCCCEEEEEEC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCC----CHHHHHHHHHhcCCCCEEEEC
Confidence 6777777666667777888888988888766655556666666778877776632 56777776654 34555543
No 256
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=71.44 E-value=32 Score=30.20 Aligned_cols=94 Identities=11% Similarity=0.051 Sum_probs=55.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-.......+..|.++..+..|-. |.+.+++++.. +..+
T Consensus 8 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 8 VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVS----SEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTT----CHHHHHHHHHHHHHHHCSCCE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 5777766666666677778888988888765544444444444666666655521 45666555532 3566
Q ss_pred EEecCCCCCccc--CCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
++.+.-..+.+. ..+.++|+++.+
T Consensus 84 lv~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 84 LVNNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 655433222221 346777776654
No 257
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=71.04 E-value=28 Score=31.13 Aligned_cols=94 Identities=11% Similarity=0.107 Sum_probs=57.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-...... +...|.++..+..|- -|.+.+++++.. +
T Consensus 28 ~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv----~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 28 TALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV----TSESEIIEAFARLDEQGID 103 (271)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT----TCHHHHHHHHHHHHHHTCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC----CCHHHHHHHHHHHHHHCCC
Confidence 677777766666777788888999998877655444433 334566776666553 145666665542 4
Q ss_pred CcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
..+++.+.-..+.+ ...+.++|+++.+
T Consensus 104 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 104 VDILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 55665543322222 2357788877665
No 258
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=70.89 E-value=21 Score=31.88 Aligned_cols=94 Identities=14% Similarity=0.074 Sum_probs=57.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|.+|++.+-.-..........|.++..+..|-. |.+.+++++.. +..+
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g~id~ 88 (271)
T 3tzq_B 13 VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLT----NEVSVRALIDFTIDTFGRLDI 88 (271)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTT----CHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 5677777666667777888888988887765555555555556666666665531 45666665542 4566
Q ss_pred EEecCCCC-C-cc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHN-P-TG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~N-P-TG--~~~~~e~l~~i~~ 269 (434)
++.+.-.. + .+ ...+.++|++..+
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 89 VDNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp EEECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred EEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 65543322 2 11 1457777777654
No 259
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=70.80 E-value=11 Score=32.74 Aligned_cols=95 Identities=7% Similarity=0.001 Sum_probs=59.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc---CCcEEEe
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK---NTRAILM 248 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~---~~~~i~~ 248 (434)
.+++|.|+......+...|.+.|..|++.+-.-..........+.++..+..|-. |.+.+++++.. ....++.
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLA----SHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTT----CHHHHHHHHHSCSSCCSEEEE
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCC----CHHHHHHHHHHHhhcCCEEEE
Confidence 4777777777667777888888988888776666666666666666666665531 46666666543 3355554
Q ss_pred cCCCCCccc--CCCHHHHHHHHHH
Q 013883 249 NTPHNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 249 ~~p~NPTG~--~~~~e~l~~i~~l 270 (434)
+.-..+.+. ..+.++++++.+.
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHHH
Confidence 433333222 4577788776653
No 260
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=70.75 E-value=18 Score=32.46 Aligned_cols=94 Identities=12% Similarity=0.064 Sum_probs=57.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-----CCcEE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-----NTRAI 246 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-----~~~~i 246 (434)
.++||.|+...-..+...|.+.|..|++.+-.-..........+.++..+..|-. |.+.+++++.. +...+
T Consensus 32 ~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~----~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 32 SAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVT----SEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT----CHHHHHHHHHHHTTSSEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCC----CHHHHHHHHHHHHHhCCCCeE
Confidence 5677776666667777888889988888776655566666666777777776632 45555554432 23444
Q ss_pred EecCC-CCCcc-------cCCCHHHHHHHHH
Q 013883 247 LMNTP-HNPTG-------KMFTREELNVIAS 269 (434)
Q Consensus 247 ~~~~p-~NPTG-------~~~~~e~l~~i~~ 269 (434)
+.+.. ..+.+ ...+.+++++..+
T Consensus 108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (281)
T 3ppi_A 108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTID 138 (281)
T ss_dssp EECCCCCCCCCCSBCTTSCBCCHHHHHHHHH
T ss_pred EEccCcccccccccccccccCCHHHHHHHHH
Confidence 44412 22222 2456777777665
No 261
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=70.60 E-value=37 Score=29.52 Aligned_cols=94 Identities=16% Similarity=0.145 Sum_probs=56.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|.+|++..-.-..... .+...|.++..+..|-. |.+.+++.+.. +
T Consensus 7 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 7 VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNIS----DIESIQNFFAEIKAENLA 82 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHTTCC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCC----CHHHHHHHHHHHHHHcCC
Confidence 57777776666677778888889888876655443333 33445777777776632 45666655432 4
Q ss_pred CcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
...++.+.-..+.+. ..+.+++++..+
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 83 IDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 566665433222222 347777776655
No 262
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=70.43 E-value=18 Score=32.46 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=57.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCC------------chh---HHHHHHHcCCEEEEEEcCCCCCCCCHHHHH
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPF------------YDS---YEATLSMAGAKIKCITLRPPDFAIPIEELK 236 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~------------y~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~ 236 (434)
.++||.|+...-..+...|.+.|..|++.+-. -.. ....+...|.++..+..|-. |.+.++
T Consensus 12 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~ 87 (287)
T 3pxx_A 12 VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR----DRAAVS 87 (287)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT----CHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC----CHHHHH
Confidence 57777776666677778888889888775432 111 12233456777777776632 456665
Q ss_pred hhccc------CCcEEEecCCCCCcccCCCHHHHHHHHHH
Q 013883 237 STISK------NTRAILMNTPHNPTGKMFTREELNVIASL 270 (434)
Q Consensus 237 ~~i~~------~~~~i~~~~p~NPTG~~~~~e~l~~i~~l 270 (434)
+++.. +..+++.+.-..+.+...+.++|++..+.
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 55542 45666655434343444677888877653
No 263
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=70.16 E-value=24 Score=31.39 Aligned_cols=94 Identities=17% Similarity=0.124 Sum_probs=57.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-.......+ .+.+...+..|-. |.+.+++.++. +..+
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~----~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK-ERPNLFYFHGDVA----DPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-TCTTEEEEECCTT----SHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hcCCEEEEEecCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 57788777777777888899999998887665444443333 3456666665521 45556655532 3444
Q ss_pred EEecCCCCCccc--CCCHHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~~l 270 (434)
++-+.-.++.+. .++.|+|+++.++
T Consensus 79 LVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 79 LVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 443322333332 4688899988764
No 264
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=69.91 E-value=33 Score=30.31 Aligned_cols=94 Identities=14% Similarity=0.088 Sum_probs=57.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-...... +...|.++..+..|-. |.+.+++.+.. +
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~ 89 (256)
T 3gaf_A 14 VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVT----DEQHREAVIKAALDQFGK 89 (256)
T ss_dssp EEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCC----CHHHHHHHHHHHHHHcCC
Confidence 567777766666777778888898888776554443333 3445777777776632 45666555532 4
Q ss_pred CcEEEecCCCC-CcccCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHN-PTGKMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~N-PTG~~~~~e~l~~i~~ 269 (434)
..+++.+.-.. +.....+.++|++..+
T Consensus 90 id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 90 ITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 56666543222 2222567788877654
No 265
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=69.79 E-value=36 Score=30.26 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=54.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++..-.-....... ...|.++..+..|-. |.+.+++++..
T Consensus 23 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~----~~~~v~~~~~~~~~~~g 98 (267)
T 1vl8_A 23 VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVS----NYEEVKKLLEAVKEKFG 98 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCC----CHHHHHHHHHHHHHHcC
Confidence 5777766666666777788888988887655433333332 233767776766531 45666655542
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+ ...+.++|+++.+
T Consensus 99 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 128 (267)
T 1vl8_A 99 KLDTVVNAAGINRRHPAEEFPLDEFRQVIE 128 (267)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 456666543322222 2346777777665
No 266
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=69.78 E-value=32 Score=30.34 Aligned_cols=94 Identities=15% Similarity=0.058 Sum_probs=55.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHH---HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-----CC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE---ATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-----NT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-----~~ 243 (434)
.+++|.|+......+...|.+.|..|++.+-.-.... ..+...|.++..+..|-. |.+.+++++.. +.
T Consensus 9 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 9 TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR----NEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT----CHHHHHHHHHHHHHHSCE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCC----CHHHHHHHHHHHHhhCCc
Confidence 5777777666667777888888988887655443333 334445778888877632 45566555432 33
Q ss_pred cEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 244 RAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 244 ~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
.+++.+.-....+. ..+.++|+++.+
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 44444332222222 357777776654
No 267
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=69.75 E-value=32 Score=30.27 Aligned_cols=94 Identities=14% Similarity=0.120 Sum_probs=55.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|.+|++..-.-.......+..+.++..+..|-. |.+.+++++.. +..+
T Consensus 14 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 14 VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT----SEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTT----CHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCC----CHHHHHHHHHHHHHHCCCCCE
Confidence 5777776666666777778888988777544333444444555666766666531 45666665542 4566
Q ss_pred EEecCCCCCccc--------CCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--------MFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG~--------~~~~e~l~~i~~ 269 (434)
++.+.-....+. ..+.+++++..+
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 2o23_A 90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLD 121 (265)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHH
T ss_pred EEECCccCCCCccccccccCCCCHHHHHHHHH
Confidence 665433222221 246677776654
No 268
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=69.19 E-value=42 Score=28.91 Aligned_cols=94 Identities=16% Similarity=0.114 Sum_probs=58.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++..-.-....... ...|.++..+..|- -|.+.+++++..
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~----~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV----SKAESVEEFSKKVLERFG 79 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT----TCHHHHHHHCC-HHHHHS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc----CCHHHHHHHHHHHHHhcC
Confidence 5677777666666777888888988888765544433332 24577777777663 256777776653
Q ss_pred CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+...++.+.-..+.+. ..+.+++++..+
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (235)
T 3l77_A 80 DVDVVVANAGLGYFKRLEELSEEEFHEMIE 109 (235)
T ss_dssp SCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCCEEEECCccccccCcccCCHHHHHHHHH
Confidence 4566665533333332 347777877665
No 269
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=68.80 E-value=46 Score=29.62 Aligned_cols=94 Identities=14% Similarity=0.075 Sum_probs=55.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+......+...|.+.|..|++..-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT----DRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCC----CHHHHHHHHHHHHHHcCC
Confidence 566776666666667778888898888766544443333 3445778877776631 45666555432 4
Q ss_pred CcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
..+++.+.-..+.+. ..+.++|+++.+
T Consensus 82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 82 IDVLVNNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 556655433333222 347778877655
No 270
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=68.58 E-value=30 Score=30.48 Aligned_cols=94 Identities=15% Similarity=0.132 Sum_probs=54.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-.......+..|.++..+..|-. |.+.++++++. +..+
T Consensus 7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 7 TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVT----IEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTT----CHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 5777766666666777788888988887655434444444444556666665531 45666655542 4566
Q ss_pred EEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
++.+.-..+.+ ...+.++|+++.+
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 83 LVNNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 66543222222 1346677765543
No 271
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=68.48 E-value=46 Score=29.72 Aligned_cols=94 Identities=5% Similarity=0.027 Sum_probs=56.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH----HHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL----SMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-....... ...|.++..+..|-. |.+.+++++..
T Consensus 29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR----APPAVMAAVDQALKEFG 104 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCC----CHHHHHHHHHHHHHHcC
Confidence 5777777666667777888899988887765544433332 234777777776632 45666655542
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+ ...+.++|+++.+
T Consensus 105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 134 (277)
T 4fc7_A 105 RIDILINCAAGNFLCPAGALSFNAFKTVMD 134 (277)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCcCCCCCCcccCCHHHHHHHHH
Confidence 456665543222222 2357788887765
No 272
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=67.84 E-value=52 Score=28.98 Aligned_cols=94 Identities=16% Similarity=0.113 Sum_probs=57.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.++||.|+......+...|.+.|..|++..-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLS----HSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCC----CHHHHHHHHHHHHHhcCC
Confidence 577777766666667778888898888876554443333 3345778777776632 45666655543 4
Q ss_pred CcEEEecCCC-CCcc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPH-NPTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~-NPTG--~~~~~e~l~~i~~ 269 (434)
..+++.+.-. .+.+ ...+.++++++.+
T Consensus 107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp CSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 5666654332 2222 2357777777654
No 273
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=67.79 E-value=30 Score=30.94 Aligned_cols=94 Identities=15% Similarity=0.177 Sum_probs=57.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-..........+.++..+..|-. |.+.++++++. +..+
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~iD~ 105 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVT----DPDSVRALFTATVEKFGRVDV 105 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTT----SHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 5666666666666677788888988888766655566666666666666666531 45666655542 4556
Q ss_pred EEecCCC-CCcc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPH-NPTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~-NPTG--~~~~~e~l~~i~~ 269 (434)
++.+.-. .+.+ ...+.++|+++.+
T Consensus 106 lVnnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 106 LFNNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp EEECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 6554322 2212 2357777777654
No 274
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=67.30 E-value=2.2 Score=41.00 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=26.1
Q ss_pred ccccCcCccCCCcccccccccccceeEeeecccc
Q 013883 12 SKMLKPSAFGSSFSSSALLSFSKHLHTISITDSA 45 (434)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (434)
+.+|||+++++-+|+.+..+|.|+.+.+..++.+
T Consensus 373 NHvLPT~G~Ar~~sgLsv~~F~K~~s~~~~s~~~ 406 (423)
T 4gic_A 373 NHVLPTSGTARFSSPLGVYDFQKRSSLIYCSPDG 406 (423)
T ss_dssp --CCCCTTGGGTCCCCCGGGGEEEEEEEC-----
T ss_pred CccCCCCCcccccCCCCHHHeeeeeeEEEECHHH
Confidence 5799999999999999999999999988877644
No 275
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=67.24 E-value=44 Score=30.31 Aligned_cols=95 Identities=15% Similarity=0.128 Sum_probs=55.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH---cC-CEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM---AG-AKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~G-~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.++||.|+...-..+...|.+.|-.|++.+-.-......... .| .++..+..|-. |.+.+++++..
T Consensus 43 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 43 SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVS----DPGSCADAARTVVDAFG 118 (293)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCC----CHHHHHHHHHHHHHHcC
Confidence 577777766666777788888898888766554444443332 33 46666666531 45555555432
Q ss_pred CCcEEEecCCCCCccc--CCCHHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~--~~~~e~l~~i~~l 270 (434)
+..+++.+.-..+.+. ..+.++|+++.++
T Consensus 119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 119 ALDVVCANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4556655433333222 4577888877653
No 276
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=67.22 E-value=44 Score=29.41 Aligned_cols=94 Identities=15% Similarity=0.113 Sum_probs=53.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchh-HHHHHHH---c-CCEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS-YEATLSM---A-GAKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~-~~~~~~~---~-G~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-.. ....... . |.++..+..|-. |.+.+++++..
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS----KGEAVRGLVDNAVRQM 81 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTT----SHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCC----CHHHHHHHHHHHHHhc
Confidence 57777776666667777888889888876544333 3332222 1 666666665531 45666665542
Q ss_pred -CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 -NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+.+ ...+.++|+++.+
T Consensus 82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 456666543322222 2346777776554
No 277
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=67.06 E-value=55 Score=28.96 Aligned_cols=101 Identities=13% Similarity=0.103 Sum_probs=59.2
Q ss_pred CCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchh----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc
Q 013883 164 GLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELKSTI 239 (434)
Q Consensus 164 g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i 239 (434)
...+... .++||.|+...-..+...|.+.|..|++..-.-.. ....++..|.++..+..|-. |.+.+++++
T Consensus 24 ~m~l~~k-~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~ 98 (271)
T 4iin_A 24 AMQFTGK-NVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAA----SESDFIEAI 98 (271)
T ss_dssp CCCCSCC-EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHH
T ss_pred hcccCCC-EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCC----CHHHHHHHH
Confidence 3344444 67777777766677778888889887775442222 23334556777777776632 455555555
Q ss_pred cc------CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 240 SK------NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 240 ~~------~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+. +...++.+.-....+ ...+.++++++.+
T Consensus 99 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 99 QTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 32 456666543322222 2457777777655
No 278
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=67.03 E-value=25 Score=30.75 Aligned_cols=74 Identities=18% Similarity=0.074 Sum_probs=48.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--CCcEEEec
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK--NTRAILMN 249 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~~~i~~~ 249 (434)
.+++|.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..|- -|.+.+++.+.. +..+++.+
T Consensus 16 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~----~~~~~~~~~~~~~~~id~li~~ 91 (249)
T 3f9i_A 16 TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNL----ANKEECSNLISKTSNLDILVCN 91 (249)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT----TSHHHHHHHHHTCSCCSEEEEC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCC----CCHHHHHHHHHhcCCCCEEEEC
Confidence 677777766666677788888898888877665556666655555555555542 156677766654 45666554
No 279
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=67.02 E-value=47 Score=30.07 Aligned_cols=94 Identities=11% Similarity=0.175 Sum_probs=55.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCC------------chhH---HHHHHHcCCEEEEEEcCCCCCCCCHHHHH
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPF------------YDSY---EATLSMAGAKIKCITLRPPDFAIPIEELK 236 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~------------y~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~ 236 (434)
.++||.|+...-..+...|.+.|..|++.+-. -... ...+...|.++..+..|-. |.+.++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~ 105 (299)
T 3t7c_A 30 VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVR----DFDAMQ 105 (299)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCC----CHHHHH
Confidence 57777776666667777888889888775422 1112 2234456778887777632 556666
Q ss_pred hhccc------CCcEEEecCCCCCcc---cCCCHHHHHHHHH
Q 013883 237 STISK------NTRAILMNTPHNPTG---KMFTREELNVIAS 269 (434)
Q Consensus 237 ~~i~~------~~~~i~~~~p~NPTG---~~~~~e~l~~i~~ 269 (434)
+++.. +..+++.+.-....+ ...+.++|+++.+
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 65542 456655543322222 2357788887765
No 280
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=67.01 E-value=48 Score=28.95 Aligned_cols=94 Identities=17% Similarity=0.169 Sum_probs=54.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~----~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 9 VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVA----DRQGVDAAVASTVEALGG 84 (247)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC----CHHHHHHHHHHHHHHcCC
Confidence 577777766666777788888898887765443333322 2234667777766531 45666655542 4
Q ss_pred CcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
..+++.+.-..+.+. ..+.++|+++.+
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 85 LDILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp CSEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 566665433222232 346777776654
No 281
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=66.98 E-value=51 Score=28.96 Aligned_cols=94 Identities=12% Similarity=0.148 Sum_probs=53.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH---c-CCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM---A-GAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~-G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-......... . |.++..+..|-. |.+.+++++..
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 9 VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVA----TPEGVDAVVESVRSSFG 84 (263)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT----SHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCC----CHHHHHHHHHHHHHHcC
Confidence 577777766666777778888898887765443333322222 1 666776766531 45666665542
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+ ...+.++|++..+
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T 3ai3_A 85 GADILVNNAGTGSNETIMEAADEKWQFYWE 114 (263)
T ss_dssp SCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 456666543222222 1346677765543
No 282
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=66.97 E-value=60 Score=29.08 Aligned_cols=95 Identities=13% Similarity=0.126 Sum_probs=57.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCch----------hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYD----------SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~----------~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~ 241 (434)
.+++|.|+...-..+...|.+.|..|++..-.-. .....+...|.++..+..|-. |.+.+++++..
T Consensus 11 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~ 86 (285)
T 3sc4_A 11 TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR----DGDAVAAAVAK 86 (285)
T ss_dssp EEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT----SHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC----CHHHHHHHHHH
Confidence 5777777666667777888888988877543322 233344556888888877632 45666655532
Q ss_pred ------CCcEEEecCCCCCccc--CCCHHHHHHHHHH
Q 013883 242 ------NTRAILMNTPHNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 242 ------~~~~i~~~~p~NPTG~--~~~~e~l~~i~~l 270 (434)
+..+++.+.-....+. ..+.++|+++.++
T Consensus 87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 123 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGI 123 (285)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4566665433332222 4577888877653
No 283
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=66.35 E-value=58 Score=28.59 Aligned_cols=94 Identities=16% Similarity=0.104 Sum_probs=54.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhcc-------c
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTIS-------K 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-------~ 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-...... +...|.++..+..|-. |.+.+++++. .
T Consensus 11 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 11 TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLS----SRSERQELMNTVANHFHG 86 (260)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT----CHHHHHHHHHHHHHHTTT
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC----CHHHHHHHHHHHHHHcCC
Confidence 677777766666777778888898887765433333222 2334677777766531 4566665553 2
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+.+ ...+.++++++.+
T Consensus 87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 116 (260)
T 2ae2_A 87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMS 116 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 456665543222222 2356777776554
No 284
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=66.24 E-value=38 Score=29.87 Aligned_cols=94 Identities=15% Similarity=0.038 Sum_probs=52.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-............++..+..|- -|.+.+++++.. +..+
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~----~d~~~v~~~~~~~~~~~g~iD~ 89 (263)
T 3ak4_A 14 KAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDV----TKRASVDAAMQKAIDALGGFDL 89 (263)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCT----TCHHHHHHHHHHHHHHHTCCCE
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeC----CCHHHHHHHHHHHHHHcCCCCE
Confidence 577777666666677777888898888765443334444443332344444442 145666665542 5566
Q ss_pred EEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
++.+.-..+.+ ...+.++|++..+
T Consensus 90 lv~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 90 LCANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHH
Confidence 66543322222 2356777776654
No 285
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=65.70 E-value=32 Score=30.64 Aligned_cols=95 Identities=15% Similarity=0.130 Sum_probs=56.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCC-Cchh---HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAP-FYDS---YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p-~y~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++..- .-.. ....+...|.++..+..|-. |.+.+++++..
T Consensus 30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----d~~~v~~~~~~~~~~~g 105 (269)
T 4dmm_A 30 IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVS----QESEVEALFAAVIERWG 105 (269)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT----SHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCC----CHHHHHHHHHHHHHHcC
Confidence 5777777666667777888888988877543 2222 22334455777777776632 45666655542
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIASL 270 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~l 270 (434)
+..+++.+.-..+.+ ...+.++|+++.++
T Consensus 106 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 106 RLDVLVNNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455665543322222 24577888877653
No 286
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=65.37 E-value=16 Score=36.61 Aligned_cols=114 Identities=19% Similarity=0.189 Sum_probs=63.9
Q ss_pred hcCCCCCCCCcEEEcCChHHHHHHHHHHcc---CC---------C-C-----eEEEcCCCchh-----------------
Q 013883 162 DSGLEVDPEKEVTVTSGCTEAIAATILGLI---NP---------G-D-----EVILFAPFYDS----------------- 206 (434)
Q Consensus 162 ~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~---~~---------g-d-----~Vlv~~p~y~~----------------- 206 (434)
.|.+.++++ .|.++.+...++...+++|. .. | . ..+...|.|.-
T Consensus 123 ~Y~L~v~~~-~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~i 201 (525)
T 3gh5_A 123 GYDLITTSN-QVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEV 201 (525)
T ss_dssp CEEEEECSS-EEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHH
T ss_pred ceEEEEeCC-EEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHH
Confidence 345556666 78887776666555555542 21 2 1 13445565542
Q ss_pred --HHHHHHHcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 207 --YEATLSMAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 207 --~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+.+.+..++.++...-+.+ .+|.+..+.+-++-..+.. .......|-.++++++++|++.|+++++-||=
T Consensus 202 k~~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 202 KRQIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 4445566777777766643 2344333322221111100 00012235678999999999999999999884
No 287
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=65.36 E-value=66 Score=28.41 Aligned_cols=94 Identities=13% Similarity=0.057 Sum_probs=54.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH---c--CCEEEEEEcCCCCCCCCHHHHHhhccc--CCc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM---A--GAKIKCITLRPPDFAIPIEELKSTISK--NTR 244 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~--G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~~ 244 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-.......+. . +..+..+..|-. |.+.+++.+.. +..
T Consensus 12 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 12 TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG----TEQGCQDVIEKYPKVD 87 (267)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTT----SHHHHHHHHHHCCCCS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCC----CHHHHHHHHHhcCCCC
Confidence 577777766666777778888898888876554443333222 2 456666665531 45666666554 456
Q ss_pred EEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 245 AILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 245 ~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+++.+.-....+ ...+.++|+++.+
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~ 114 (267)
T 3t4x_A 88 ILINNLGIFEPVEYFDIPDEDWFKLFE 114 (267)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHH
Confidence 665543222212 2456777776654
No 288
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=65.29 E-value=54 Score=28.53 Aligned_cols=94 Identities=12% Similarity=0.143 Sum_probs=54.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCC-CchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAP-FYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p-~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++..- .-...... +...|.++..+..|-. |.+.++++++.
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 6 VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVA----NAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCC----CHHHHHHHHHHHHHHcC
Confidence 5777776666666677778888988877543 32222222 3334667776766531 45666665542
Q ss_pred CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+.+. ..+.++++++.+
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 2uvd_A 82 QVDILVNNAGVTKDNLLMRMKEEEWDTVIN 111 (246)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 4566665433222221 356777776654
No 289
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=65.29 E-value=48 Score=29.56 Aligned_cols=94 Identities=14% Similarity=0.171 Sum_probs=54.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCc--hhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFY--DSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y--~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~ 243 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.- ......+...|.+...+..|-. |.+.+++.+.. +.
T Consensus 9 valVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~v~~~~~~~G~i 84 (258)
T 4gkb_A 9 VVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ----DDAQCRDAVAQTIATFGRL 84 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT----CHHHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC----CHHHHHHHHHHHHHHhCCC
Confidence 456666655555666778888887777644322 2233344556767777776531 45555554432 34
Q ss_pred cEEEecCC--CCCcccCCCHHHHHHHHHH
Q 013883 244 RAILMNTP--HNPTGKMFTREELNVIASL 270 (434)
Q Consensus 244 ~~i~~~~p--~NPTG~~~~~e~l~~i~~l 270 (434)
.+ +++|. +.+.....+.|+|+++.++
T Consensus 85 Di-LVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 85 DG-LVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp CE-EEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred CE-EEECCCCCCCCCccCCHHHHHHHHHH
Confidence 44 44444 3344456788889888764
No 290
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=65.21 E-value=46 Score=30.15 Aligned_cols=94 Identities=14% Similarity=0.155 Sum_probs=56.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.++||.|+...-..+...|.+.|..|++.+-.-...... +...|.++..+..|-. |.+.++++++. +
T Consensus 33 ~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 33 AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVR----HLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHHSS
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCC----CHHHHHHHHHHHHHhCCC
Confidence 577777666666667778888898888876555444433 3344677777776632 45666665542 4
Q ss_pred CcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
..+++.+.-....+. ..+.++++++.+
T Consensus 109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 109 VDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 566655433222222 356777776554
No 291
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=65.06 E-value=61 Score=27.94 Aligned_cols=94 Identities=13% Similarity=0.088 Sum_probs=53.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM----AGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|.+|++..-.-......... .+.++..+..|- -|.+.+++++..
T Consensus 9 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~----~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 9 VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL----LSEESINKAFEEIYNLVD 84 (248)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT----TCHHHHHHHHHHHHHHSS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC----CCHHHHHHHHHHHHHhcC
Confidence 577776666666667777888898887765443322222221 466676666553 156666666542
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+....+.+ ...+.++++++.+
T Consensus 85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (248)
T 2pnf_A 85 GIDILVNNAGITRDKLFLRMSLLDWEEVLK 114 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHh
Confidence 566776654322222 2346666665544
No 292
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=65.01 E-value=42 Score=30.78 Aligned_cols=94 Identities=15% Similarity=0.076 Sum_probs=55.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCC----------ch---hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhh
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPF----------YD---SYEATLSMAGAKIKCITLRPPDFAIPIEELKST 238 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~----------y~---~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~ 238 (434)
.++||.|+...-..+...|.+.|..|++.+-. -. .....+...|.++..+..|-. |.+.++++
T Consensus 29 ~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~ 104 (322)
T 3qlj_A 29 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVA----DWDQAAGL 104 (322)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTT----SHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCC----CHHHHHHH
Confidence 56777666666666777888889888876432 11 223334556778877766531 45666655
Q ss_pred ccc------CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 239 ISK------NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 239 i~~------~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+.. +..+++.+.-....+ ...+.++|+++.+
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 143 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIA 143 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 542 455555443222222 2457778777665
No 293
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=64.96 E-value=31 Score=30.67 Aligned_cols=95 Identities=18% Similarity=0.127 Sum_probs=55.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcC-CCchh---HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFA-PFYDS---YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~-p~y~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++.. ..-.. ....++..|.++..+..|-. |.+.++++++.
T Consensus 20 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 20 VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIR----QVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp EEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT----SHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC----CHHHHHHHHHHHHHHcC
Confidence 566776666666677778888898887743 22222 22334456778887776632 45666655542
Q ss_pred CCcEEEecCCCCCccc--CCCHHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~--~~~~e~l~~i~~l 270 (434)
+..+++.+.-..+.+. ..+.++|+++.+.
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4555554432333222 3477888877653
No 294
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=64.91 E-value=33 Score=30.67 Aligned_cols=94 Identities=13% Similarity=0.149 Sum_probs=55.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCC-------------CchhH---HHHHHHcCCEEEEEEcCCCCCCCCHHHH
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAP-------------FYDSY---EATLSMAGAKIKCITLRPPDFAIPIEEL 235 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p-------------~y~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l 235 (434)
.++||.|+...-..+...|.+.|..|++.+- .-... ...+...+.++..+..|-. |.+.+
T Consensus 13 ~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v 88 (277)
T 3tsc_A 13 VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTR----DFDRL 88 (277)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC----CHHHH
Confidence 5777777666667777888888988887532 11112 2223445777777776632 56666
Q ss_pred Hhhccc------CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 236 KSTISK------NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 236 ~~~i~~------~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
++.++. +..+++.+.-..+.+. ..+.++|+++.+
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 665543 4566655433222222 457788877765
No 295
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=64.78 E-value=44 Score=29.48 Aligned_cols=93 Identities=13% Similarity=0.147 Sum_probs=51.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-..........+.++..+..|- -|.+.+++++.. +..+
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~----~~~~~v~~~~~~~~~~~g~iD~ 84 (260)
T 1nff_A 9 VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDV----TQPAQWKAAVDTAVTAFGGLHV 84 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCT----TCHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecC----CCHHHHHHHHHHHHHHcCCCCE
Confidence 577776666666667777888898888765443334444343333455555542 145666665542 5666
Q ss_pred EEecCCCCCccc--CCCHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIA 268 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~ 268 (434)
++.+......+. ..+.++++++.
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~ 109 (260)
T 1nff_A 85 LVNNAGILNIGTIEDYALTEWQRIL 109 (260)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHH
Confidence 665433222221 34667765544
No 296
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=64.73 E-value=49 Score=29.40 Aligned_cols=92 Identities=12% Similarity=0.122 Sum_probs=54.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCC------------chhH---HHHHHHcCCEEEEEEcCCCCCCCCHHHHH
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPF------------YDSY---EATLSMAGAKIKCITLRPPDFAIPIEELK 236 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~------------y~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~ 236 (434)
.++||.|+...-..+...|.+.|-.|++.+-. -... ...+...|.++..+..|-. |.+.++
T Consensus 15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~ 90 (278)
T 3sx2_A 15 VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVR----DRESLS 90 (278)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTT----CHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCC----CHHHHH
Confidence 57777776666667778888889888775432 1112 2223445777877776632 556666
Q ss_pred hhccc------CCcEEEecCCCCCcccCCCHHHHHHHHH
Q 013883 237 STISK------NTRAILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 237 ~~i~~------~~~~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
+++.. +..+++.+.-..+.+. +.++|+++.+
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~ 127 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVID 127 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHH
Confidence 65542 5566665433333222 5677777655
No 297
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=64.41 E-value=2.7 Score=40.53 Aligned_cols=34 Identities=18% Similarity=0.339 Sum_probs=30.5
Q ss_pred ccccCcCccCCCcccccccccccceeEeeecccc
Q 013883 12 SKMLKPSAFGSSFSSSALLSFSKHLHTISITDSA 45 (434)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (434)
+.+|||+++++-+|+.+..+|.|+.+.+..++.+
T Consensus 366 NHvLPT~G~AR~~sgLsV~~F~K~~s~~~~s~~~ 399 (434)
T 1kae_A 366 NHVLPTYGYTATCSSLGLADFQKRMTVQELSKEG 399 (434)
T ss_dssp CCCCCCTTGGGTCCCSCGGGGEEEEEEEEECHHH
T ss_pred CcccCCCCceeccCCCcHHhccceeeEEEECHHH
Confidence 5799999999999999999999999998887643
No 298
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=64.19 E-value=71 Score=28.47 Aligned_cols=94 Identities=15% Similarity=0.069 Sum_probs=53.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|..|++..-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 46 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~----d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 46 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVS----KKEEISEVINKILTEHKN 121 (285)
T ss_dssp EEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTT----CHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCC----CHHHHHHHHHHHHHhcCC
Confidence 577776666666677778888898888754332222222 2334667777766531 56666665532 4
Q ss_pred CcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
..+|+.+.-..+.+ ...+.++++++.+
T Consensus 122 id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 150 (285)
T 2c07_A 122 VDILVNNAGITRDNLFLRMKNDEWEDVLR 150 (285)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 56666543322222 2346677766554
No 299
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=64.16 E-value=58 Score=28.96 Aligned_cols=94 Identities=11% Similarity=0.140 Sum_probs=55.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCC------------chh---HHHHHHHcCCEEEEEEcCCCCCCCCHHHHH
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPF------------YDS---YEATLSMAGAKIKCITLRPPDFAIPIEELK 236 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~------------y~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~ 236 (434)
.+++|.|+...-..+...|.+.|..|++.+-. -.. ....+...|.++..+..|-. |.+.++
T Consensus 12 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~ 87 (281)
T 3s55_A 12 TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVK----DRAALE 87 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCC----CHHHHH
Confidence 57777776666667778888889888775432 111 22234456777777776632 456666
Q ss_pred hhccc------CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 237 STISK------NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 237 ~~i~~------~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
++++. +..+++.+.-..+.+ ...+.++|+++.+
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 88 SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 55542 456666543322222 2457788877654
No 300
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=64.06 E-value=50 Score=29.46 Aligned_cols=94 Identities=16% Similarity=0.094 Sum_probs=53.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 24 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR----SVPEIEALVAAVVERYGP 99 (277)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHTCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCC----CHHHHHHHHHHHHHHhCC
Confidence 577777666666667777888898887765443333222 2334666766666531 45666655542 4
Q ss_pred CcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
..+++.+.-..+.+ ...+.++|+++.+
T Consensus 100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 100 VDVLVNNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 56666543222222 1356777776654
No 301
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=63.96 E-value=72 Score=27.59 Aligned_cols=93 Identities=9% Similarity=0.013 Sum_probs=53.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-...... +...+.++..+..|-. |.+.+++++.. +
T Consensus 13 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDIT----SEQELSALADFAISKLGK 88 (255)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHHSS
T ss_pred EEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCC----CHHHHHHHHHHHHHhcCC
Confidence 577777666666677778888898887765443332222 3334666666665531 56666666542 5
Q ss_pred CcEEEecCCCCCc-ccCCCHHHHHHHH
Q 013883 243 TRAILMNTPHNPT-GKMFTREELNVIA 268 (434)
Q Consensus 243 ~~~i~~~~p~NPT-G~~~~~e~l~~i~ 268 (434)
..+|+.+...... ....+.+++++..
T Consensus 89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~ 115 (255)
T 1fmc_A 89 VDILVNNAGGGGPKPFDMPMADFRRAY 115 (255)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHH
Confidence 6677665332221 1234666665544
No 302
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=63.96 E-value=43 Score=29.93 Aligned_cols=94 Identities=15% Similarity=0.069 Sum_probs=56.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.++||.|+...-..+...|.+.|-.|++..-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVT----STDEVHAAVAAAVERFGP 101 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTT----CHHHHHHHHHHHHHHHCS
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCC----CHHHHHHHHHHHHHHcCC
Confidence 577777766666777778888898888766554443333 3334777777776531 45666655532 4
Q ss_pred CcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
..+++.+.-..+.+ ...+.++|+++.+
T Consensus 102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 102 IGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 55555543322222 2357777877655
No 303
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=63.84 E-value=32 Score=30.90 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=54.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCC----------------chhHH---HHHHHcCCEEEEEEcCCCCCCCCH
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPF----------------YDSYE---ATLSMAGAKIKCITLRPPDFAIPI 232 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~----------------y~~~~---~~~~~~G~~~~~v~~~~~~~~~d~ 232 (434)
.++||.|+...-..+...|.+.|..|++.+-. -.... ..+...|.++..+..|-. |.
T Consensus 13 ~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~ 88 (286)
T 3uve_A 13 VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR----DY 88 (286)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT----CH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC----CH
Confidence 57777776666677778888889888775322 11122 223345677777776632 45
Q ss_pred HHHHhhccc------CCcEEEecCCCCCccc---CCCHHHHHHHHH
Q 013883 233 EELKSTISK------NTRAILMNTPHNPTGK---MFTREELNVIAS 269 (434)
Q Consensus 233 ~~l~~~i~~------~~~~i~~~~p~NPTG~---~~~~e~l~~i~~ 269 (434)
+.+++++.. +..+++.+.-....+. ..+.++|+++.+
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMID 134 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHH
Confidence 666655542 4556555433222222 357788877765
No 304
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=63.79 E-value=57 Score=28.40 Aligned_cols=94 Identities=15% Similarity=0.060 Sum_probs=55.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-...... +...+.++..+..|-. |.+.+++.+.. +
T Consensus 11 ~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 11 VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVS----DPESAKAMADRTLAEFGG 86 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT----SHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCC----CHHHHHHHHHHHHHHcCC
Confidence 567777766666777778888898888876554444333 3345778877776632 45666655542 5
Q ss_pred CcEEEecCCC---CCcc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPH---NPTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~---NPTG--~~~~~e~l~~i~~ 269 (434)
...++.+.-. .+.+ ...+.+++++..+
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 118 (253)
T 3qiv_A 87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMS 118 (253)
T ss_dssp CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCCcccccCCHHHHHHHHh
Confidence 5666654322 1111 1356777766544
No 305
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=63.66 E-value=59 Score=28.52 Aligned_cols=95 Identities=12% Similarity=0.154 Sum_probs=56.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH---cCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM---AGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-......... .+.++..+..|-. |.+.+++++.. +
T Consensus 8 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 8 VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVR----NTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC----CHHHHHHHHHHHHHHcCC
Confidence 567776666666667778888898888866554444443332 4556777766531 45566555532 4
Q ss_pred CcEEEecCCCCCcc--cCCCHHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTG--KMFTREELNVIASL 270 (434)
Q Consensus 243 ~~~i~~~~p~NPTG--~~~~~e~l~~i~~l 270 (434)
..+++.+.-....+ ...+.++|+++.++
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 84 IDILINNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 55665543222222 24577888877664
No 306
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=63.39 E-value=62 Score=28.17 Aligned_cols=93 Identities=14% Similarity=0.117 Sum_probs=53.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|.+|++.+-.-..... .++..+.++..+..|-. |.+.++++++. +
T Consensus 15 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 15 VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVT----NTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCC----CHHHHHHHHHHHHHHcCC
Confidence 57777766666666777788889888876544333222 23334666766666531 56666665542 5
Q ss_pred CcEEEecCCCCC-cc--cCCCHHHHHHHH
Q 013883 243 TRAILMNTPHNP-TG--KMFTREELNVIA 268 (434)
Q Consensus 243 ~~~i~~~~p~NP-TG--~~~~~e~l~~i~ 268 (434)
..+++.+....+ .+ ...+.+++++..
T Consensus 91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 119 (260)
T 3awd_A 91 VDILVACAGICISEVKAEDMTDGQWLKQV 119 (260)
T ss_dssp CCEEEECCCCCCCSCCTTTCCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHH
Confidence 667766533222 22 234566665543
No 307
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=63.36 E-value=58 Score=28.17 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=52.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcC--CEEEEEEcCCCCCCCCHHHHHhhccc------CC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAG--AKIKCITLRPPDFAIPIEELKSTISK------NT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G--~~~~~v~~~~~~~~~d~~~l~~~i~~------~~ 243 (434)
.+++|.|+...-..+...|.+.|.+|++..-.-..........+ .++..+..|- -|.+.+++++.. +.
T Consensus 8 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~----~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 8 VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS----SDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT----TCHHHHHHHHHHHHHHHSSC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCC----CCHHHHHHHHHHHHHHhCCC
Confidence 57777666666666777788888888776544333333333322 3455555542 145666655543 46
Q ss_pred cEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 244 RAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 244 ~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
.+++.+....+.+ ...+.++++++.+
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (251)
T 1zk4_A 84 STLVNNAGIAVNKSVEETTTAEWRKLLA 111 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 6666654333322 2346677766554
No 308
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=63.36 E-value=46 Score=29.40 Aligned_cols=94 Identities=10% Similarity=0.060 Sum_probs=56.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 13 VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDIT----DDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp EEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHTSC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC----CHHHHHHHHHHHHHHcCC
Confidence 577777766666777788888898888876654443333 3345777777776632 45666655532 4
Q ss_pred CcEEEecCCC-CCcc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPH-NPTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~-NPTG--~~~~~e~l~~i~~ 269 (434)
..+++.+.-. .+.+ ...+.++|+++.+
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 118 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIE 118 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHH
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHH
Confidence 5666554322 1222 2457778877665
No 309
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=63.03 E-value=48 Score=28.83 Aligned_cols=94 Identities=10% Similarity=0.040 Sum_probs=53.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEE-EEEEcCCCCCCCCHHHHHhhccc-----CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKI-KCITLRPPDFAIPIEELKSTISK-----NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~-~~v~~~~~~~~~d~~~l~~~i~~-----~~~~ 245 (434)
.+++|.|+......+...|.+.|.+|++..-.-.......+..+.++ ..+..|- -|.+.++++++. +..+
T Consensus 13 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~----~~~~~~~~~~~~~~~~~~id~ 88 (254)
T 2wsb_A 13 CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV----TDAEAMTAAAAEAEAVAPVSI 88 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCT----TCHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEec----CCHHHHHHHHHHHHhhCCCcE
Confidence 57777666666667777788889888876554443444444445555 5555442 156666665532 5566
Q ss_pred EEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
++.+....+.+ ...+.+++++..+
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (254)
T 2wsb_A 89 LVNSAGIARLHDALETDDATWRQVMA 114 (254)
T ss_dssp EEECCCCCCCBCSTTCCHHHHHHHHH
T ss_pred EEECCccCCCCCcccCCHHHHHHHHH
Confidence 66553322222 2345666665443
No 310
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=62.75 E-value=71 Score=28.36 Aligned_cols=99 Identities=15% Similarity=0.131 Sum_probs=57.7
Q ss_pred CCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEc-CCCchhH---HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-
Q 013883 167 VDPEKEVTVTSGCTEAIAATILGLINPGDEVILF-APFYDSY---EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK- 241 (434)
Q Consensus 167 ~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~-~p~y~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~- 241 (434)
+... .++||.|+...-..+...|.+.|..|++. ...-... ...++..|.++..+..|-. |.+.+++++..
T Consensus 29 l~gk-~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~----d~~~v~~~~~~~ 103 (271)
T 3v2g_A 29 LAGK-TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNR----DAEAIEQAIRET 103 (271)
T ss_dssp CTTC-EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHH
T ss_pred CCCC-EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCC----CHHHHHHHHHHH
Confidence 3334 57777776666677778888899888775 3322222 2334455778877776632 55666665542
Q ss_pred -----CCcEEEecCCCCCcc--cCCCHHHHHHHHHH
Q 013883 242 -----NTRAILMNTPHNPTG--KMFTREELNVIASL 270 (434)
Q Consensus 242 -----~~~~i~~~~p~NPTG--~~~~~e~l~~i~~l 270 (434)
+..+++.+.-....+ ...+.++|+++.+.
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 455665543222222 23577888877653
No 311
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=62.74 E-value=63 Score=27.84 Aligned_cols=92 Identities=13% Similarity=0.078 Sum_probs=51.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH-cCCEEEEEEcCCCCCCCCHHHHHhhccc--CCcEEEe
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM-AGAKIKCITLRPPDFAIPIEELKSTISK--NTRAILM 248 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~~~i~~ 248 (434)
.+++|.|+...-..+...+.+.|.+|++..-.-......... .+.+++ ..|- -|.+.+++++.. +..+++.
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~D~----~~~~~~~~~~~~~~~id~vi~ 82 (244)
T 3d3w_A 9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPV--CVDL----GDWEATERALGSVGPVDLLVN 82 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEE--ECCT----TCHHHHHHHHTTCCCCCEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEE--EEeC----CCHHHHHHHHHHcCCCCEEEE
Confidence 577777766666667777888888887765443333333332 255544 3331 157778877764 3566665
Q ss_pred cCCCCCcc--cCCCHHHHHHHHH
Q 013883 249 NTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 249 ~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+.-....+ ...+.+++++..+
T Consensus 83 ~Ag~~~~~~~~~~~~~~~~~~~~ 105 (244)
T 3d3w_A 83 NAAVALLQPFLEVTKEAFDRSFE 105 (244)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCccCCCcchhhCCHHHHHHHHH
Confidence 43222222 1235666665543
No 312
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=62.58 E-value=48 Score=29.08 Aligned_cols=94 Identities=16% Similarity=0.147 Sum_probs=53.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|..|++..-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVS----DRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----SHHHHHHHHHHHHHHTTC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC----CHHHHHHHHHHHHHHhCC
Confidence 466776666666667777888898887765433322222 2334666766766531 45666665542 4
Q ss_pred CcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
..+++.+.-..+.+. ..+.++|+++.+
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 80 FDVIVNNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 566665433222221 346777766554
No 313
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=62.26 E-value=41 Score=29.79 Aligned_cols=94 Identities=6% Similarity=0.013 Sum_probs=53.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|-.|++..-.-.......+..+.++..+..|-. |.+.++++++. +..+
T Consensus 8 ~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 8 TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVS----DPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTT----SHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCC----CHHHHHHHHHHHHHHcCCCcE
Confidence 5777776666666777788888988887655444444455555555666665531 45666655543 4566
Q ss_pred EEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
++.+.-....+ ...+.++|+++.+
T Consensus 84 lvnnAg~~~~~~~~~~~~~~~~~~~~ 109 (263)
T 2a4k_A 84 VAHFAGVAHSALSWNLPLEAWEKVLR 109 (263)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 66543222222 2346677766554
No 314
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=62.22 E-value=45 Score=29.80 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=55.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHH---HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE---ATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.++||.|+...-..+...|.+.|..|++.+-.-.... ..+...|.++..+..|-. |.+.++++++. +
T Consensus 34 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~----d~~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 34 RALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVT----QPDQVRGMLDQMTGELGG 109 (276)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCC----CHHHHHHHHHHHHHHcCC
Confidence 6777777666667777788888988877654433332 234445666666666531 45666665542 5
Q ss_pred CcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
..+++.+.-....+ ...+.++|+++.+
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 110 IDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 56666543322222 2457788876655
No 315
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=62.10 E-value=77 Score=28.09 Aligned_cols=94 Identities=12% Similarity=0.082 Sum_probs=55.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCc----------hhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFY----------DSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y----------~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~ 241 (434)
.++||.|+...-..+...|.+.|.+|++..-.- ......+...|.++..+..|-. |.+.+++++..
T Consensus 8 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~ 83 (274)
T 3e03_A 8 TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR----EEDQVRAAVAA 83 (274)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT----CHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC----CHHHHHHHHHH
Confidence 567777666666667778888898887754322 2233344556888888877632 45666555432
Q ss_pred ------CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 ------NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ------~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+ ...+.++|+++.+
T Consensus 84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHh
Confidence 455555543222222 2357788877665
No 316
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=61.99 E-value=85 Score=29.18 Aligned_cols=94 Identities=12% Similarity=0.124 Sum_probs=55.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCch----------hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYD----------SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~----------~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~ 241 (434)
.++||.|+...-..+...|.+.|-.|++..-.-. .....++..|.++..+..|-. |.+.+++++..
T Consensus 47 ~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~----d~~~v~~~~~~ 122 (346)
T 3kvo_A 47 TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVR----DEQQISAAVEK 122 (346)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTT----CHHHHHHHHHH
T ss_pred EEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCC----CHHHHHHHHHH
Confidence 5666666666666677788888988777543221 233445667888888876632 55666665542
Q ss_pred ------CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 ------NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ------~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+ ...+.++|+++.+
T Consensus 123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 455565543222222 2456777776654
No 317
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=61.76 E-value=58 Score=29.13 Aligned_cols=94 Identities=13% Similarity=0.077 Sum_probs=54.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCc-hhHHHHHH---H-cCCEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFY-DSYEATLS---M-AGAKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~---~-~G~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.- ........ . .+.++..+..|-. |.+.+++++..
T Consensus 27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 27 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMT----KPSEIADMMAMVADRF 102 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTT----CHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCC----CHHHHHHHHHHHHHHC
Confidence 677777777666777788888998888765522 22222222 2 2566776665531 45666655542
Q ss_pred -CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 -NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+.+. ..+.++|+++.+
T Consensus 103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 133 (281)
T 3v2h_A 103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIA 133 (281)
T ss_dssp SSCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4566655433332222 347788877665
No 318
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=61.66 E-value=72 Score=28.24 Aligned_cols=94 Identities=16% Similarity=0.103 Sum_probs=53.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhcc-------c
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTIS-------K 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-------~ 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-...... +...|.++..+..|-. |.+.+++++. .
T Consensus 23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 23 TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLL----SRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHTTS
T ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCC----CHHHHHHHHHHHHHHcCC
Confidence 577777766666777778888898887765443333322 2334667776766531 4556655543 3
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+ ...+.++|+++.+
T Consensus 99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (273)
T 1ae1_A 99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMG 128 (273)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 455565543222222 2356777776554
No 319
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=61.20 E-value=71 Score=28.12 Aligned_cols=95 Identities=17% Similarity=0.071 Sum_probs=55.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH----cC-CEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM----AG-AKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G-~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-......... .+ .++..+..|-. |.+.++++++.
T Consensus 10 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 10 VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVL----DALQVRAFAEACERTL 85 (265)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTT----CHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC----CHHHHHHHHHHHHHHc
Confidence 577777766666777788888898888876554443333222 33 34666666531 45555554432
Q ss_pred -CCcEEEecCCCCCccc--CCCHHHHHHHHHH
Q 013883 242 -NTRAILMNTPHNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG~--~~~~e~l~~i~~l 270 (434)
+..+++.+.-..+.+. ..+.++|++..+.
T Consensus 86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4556655433333322 4577888877664
No 320
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=61.09 E-value=71 Score=29.16 Aligned_cols=94 Identities=11% Similarity=0.154 Sum_probs=55.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCC------------chhH---HHHHHHcCCEEEEEEcCCCCCCCCHHHHH
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPF------------YDSY---EATLSMAGAKIKCITLRPPDFAIPIEELK 236 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~------------y~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~ 236 (434)
.++||.|+...-..+...|.+.|..|++.+-. -... ...+...|.++..+..|-. |.+.++
T Consensus 48 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~ 123 (317)
T 3oec_A 48 VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVR----DLASLQ 123 (317)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC----CHHHHH
Confidence 57777776666677778888889888775322 1112 2233456777877776632 456666
Q ss_pred hhccc------CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 237 STISK------NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 237 ~~i~~------~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+++.. +..+++.+.-....+. ..+.++|+++.+
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 55542 4566655433322222 457788877665
No 321
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=61.01 E-value=71 Score=27.46 Aligned_cols=91 Identities=11% Similarity=0.029 Sum_probs=52.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH-cCCEEEEEEcCCCCCCCCHHHHHhhccc--CCcEEEe
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM-AGAKIKCITLRPPDFAIPIEELKSTISK--NTRAILM 248 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~~~i~~ 248 (434)
.+++|.|+...-..+...|.+.|.+|++.+-.-......... .+.+++ ..|- -|.+.+++++.. +..+++.
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~D~----~~~~~~~~~~~~~~~id~vi~ 82 (244)
T 1cyd_A 9 RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPV--CVDL----GDWDATEKALGGIGPVDLLVN 82 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEE--ECCT----TCHHHHHHHHTTCCCCSEEEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcE--EecC----CCHHHHHHHHHHcCCCCEEEE
Confidence 677777766666777778888898888765543333333332 355554 3331 157778877764 3566665
Q ss_pred cCCCCCcc--cCCCHHHHHHHH
Q 013883 249 NTPHNPTG--KMFTREELNVIA 268 (434)
Q Consensus 249 ~~p~NPTG--~~~~~e~l~~i~ 268 (434)
+......+ ...+.+++++..
T Consensus 83 ~Ag~~~~~~~~~~~~~~~~~~~ 104 (244)
T 1cyd_A 83 NAALVIMQPFLEVTKEAFDRSF 104 (244)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHH
T ss_pred CCcccCCCCcccCCHHHHHHHH
Confidence 43322222 234566665544
No 322
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=60.97 E-value=62 Score=25.88 Aligned_cols=110 Identities=10% Similarity=0.154 Sum_probs=67.5
Q ss_pred CCCCCCCCcEEEcCCh--HHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCC-CCHHHHHhhcc
Q 013883 164 GLEVDPEKEVTVTSGC--TEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFA-IPIEELKSTIS 240 (434)
Q Consensus 164 g~~~~~~~~i~~t~G~--~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~-~d~~~l~~~i~ 240 (434)
|..+... .++++-+. ...+..+.+.+.+-|=+|+....+ ...++..|+++..|.-..+++. -+...+.+.+.
T Consensus 19 g~~lP~~-gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GT----a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~ 93 (143)
T 2yvq_A 19 GFKIPQK-GILIGIQQSFRPRFLGVAEQLHNEGFKLFATEAT----SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIR 93 (143)
T ss_dssp SCCCCCS-EEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHH----HHHHHHTTCCCEEECCGGGC-----CBCHHHHHH
T ss_pred CCCCCCC-CEEEEecccchHHHHHHHHHHHHCCCEEEECchH----HHHHHHcCCeEEEEEeccCCCcccccccHHHHHH
Confidence 5555555 37776565 555655677777778777766533 4456678988887753322211 00023556666
Q ss_pred cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEc
Q 013883 241 KNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSD 281 (434)
Q Consensus 241 ~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~D 281 (434)
.+..-++++.|.. . .-+..+-..|.+.|-+|+++++..
T Consensus 94 ~g~i~lVInt~~~-~--~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 94 DGSIDLVINLPNN-N--TKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp TTSCCEEEECCCC-C--GGGHHHHHHHHHHHHHTTCCEECS
T ss_pred CCCceEEEECCCC-C--CcCCccHHHHHHHHHHhCCCeEcC
Confidence 6655566666633 1 223667888999999999998863
No 323
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=60.92 E-value=77 Score=27.89 Aligned_cols=95 Identities=13% Similarity=0.086 Sum_probs=55.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCc---hhH---HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFY---DSY---EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK---- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y---~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~---- 241 (434)
.+++|.|+...-..+...|.+.|..|++..-.- ... ...+...|.++..+..|-. |.+.+++++..
T Consensus 13 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 13 VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS----NEEEVAKLFDFAEKE 88 (262)
T ss_dssp EEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCC----SHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCC----CHHHHHHHHHHHHHH
Confidence 577777766666777888899998888753221 112 2223445778888877632 55666665542
Q ss_pred --CCcEEEecCCCCCccc--CCCHHHHHHHHHH
Q 013883 242 --NTRAILMNTPHNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 242 --~~~~i~~~~p~NPTG~--~~~~e~l~~i~~l 270 (434)
+..+++.+.-....+. ..+.++|+++.+.
T Consensus 89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 121 (262)
T 3ksu_A 89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTI 121 (262)
T ss_dssp HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3444444322222222 3577888877653
No 324
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=60.91 E-value=67 Score=28.31 Aligned_cols=94 Identities=17% Similarity=0.192 Sum_probs=52.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH---c--CCEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM---A--GAKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~--G~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-.......+. . |.++..+..|-. |.+.+++++..
T Consensus 15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 15 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS----DEAQVEAYVTATTERF 90 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTT----SHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCC----CHHHHHHHHHHHHHHc
Confidence 577776666666677778888898887765443333332222 2 666776766531 45666665542
Q ss_pred -CCcEEEecCCCCCc-c--cCCCHHHHHHHHH
Q 013883 242 -NTRAILMNTPHNPT-G--KMFTREELNVIAS 269 (434)
Q Consensus 242 -~~~~i~~~~p~NPT-G--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+. + ...+.++|+++.+
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 122 (267)
T 1iy8_A 91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVS 122 (267)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHH
Confidence 45666554322211 2 1346777776544
No 325
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=60.46 E-value=85 Score=27.47 Aligned_cols=94 Identities=19% Similarity=0.223 Sum_probs=51.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHc-----CCEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-----GAKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-----G~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-.......+.. +.++..+..|-. |.+.+++++..
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 9 LAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIR----EPGDIDRLFEKARDLG 84 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTT----CHHHHHHHHHHHHHTT
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCC----CHHHHHHHHHHHHHhc
Confidence 5777766666666677778888988887654433333322221 335666665531 45666665542
Q ss_pred CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+..+++.+....+.+. ..+.++|++..+
T Consensus 85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (260)
T 2z1n_A 85 GADILVYSTGGPRPGRFMELGVEDWDESYR 114 (260)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3566665433222221 346677765543
No 326
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=60.32 E-value=42 Score=29.09 Aligned_cols=94 Identities=13% Similarity=0.121 Sum_probs=52.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM----AGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++..-.-......... .+.++..+..|-. |.+.+++++..
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA----DEGDVNAAIAATMEQFG 79 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC----CHHHHHHHHHHHHHHhC
Confidence 467776666666667777888888887765544333333322 2455666665531 56666665542
Q ss_pred CCcEEEecCCCCCcc-----cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG-----KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG-----~~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+.+ ...+.+++++..+
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 2cfc_A 80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMA 112 (250)
T ss_dssp CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHH
Confidence 566666553322222 1235666665543
No 327
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=60.30 E-value=41 Score=30.02 Aligned_cols=94 Identities=13% Similarity=0.117 Sum_probs=55.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCC-------------Cchh---HHHHHHHcCCEEEEEEcCCCCCCCCHHHH
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAP-------------FYDS---YEATLSMAGAKIKCITLRPPDFAIPIEEL 235 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p-------------~y~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l 235 (434)
.+++|.|+...-..+...|.+.|-.|++.+- .-.. ....+...|.++..+..|-. |.+.+
T Consensus 17 ~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v 92 (280)
T 3pgx_A 17 VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR----DDAAL 92 (280)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT----CHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC----CHHHH
Confidence 5677777666667777888888988887542 1111 22234445777777766531 45666
Q ss_pred Hhhccc------CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 236 KSTISK------NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 236 ~~~i~~------~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
++.+.. +..+++.+.-....+. ..+.++|+++.+
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIG 134 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 665542 4566665433332222 357788877655
No 328
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=60.28 E-value=46 Score=29.80 Aligned_cols=65 Identities=11% Similarity=0.102 Sum_probs=45.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS 240 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~ 240 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-..........+.++..+..|-. |.+.+++++.
T Consensus 7 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~ 71 (281)
T 3zv4_A 7 VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVR----SLQDQKRAAE 71 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTT----CHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCC----CHHHHHHHHH
Confidence 5777777766667777888889988888776666666666667777777776532 4555555443
No 329
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=59.78 E-value=60 Score=28.85 Aligned_cols=94 Identities=16% Similarity=0.107 Sum_probs=55.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.++||.|+...-..+...|.+.|-.|++.+-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 30 VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVN----DATAVDALVESTLKEFGA 105 (270)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCC----CHHHHHHHHHHHHHHcCC
Confidence 567777666666677778888898888766554433332 3345666666665531 45666655542 4
Q ss_pred CcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
..+++.+.-....+ ...+.++|+++.+
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (270)
T 3ftp_A 106 LNVLVNNAGITQDQLAMRMKDDEWDAVID 134 (270)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 55665543322222 2457788887665
No 330
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=59.75 E-value=47 Score=24.64 Aligned_cols=90 Identities=13% Similarity=0.092 Sum_probs=50.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCC-CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecC
Q 013883 172 EVTVTSGCTEAIAATILGLINPG-DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNT 250 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~ 250 (434)
.|+++.++.-+. .+...+...| .+|.+.+..-..... +...|.......+. +.+.+++.+. +..+|+.+.
T Consensus 7 ~v~I~G~G~iG~-~~~~~l~~~g~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~------~~~~~~~~~~-~~d~vi~~~ 77 (118)
T 3ic5_A 7 NICVVGAGKIGQ-MIAALLKTSSNYSVTVADHDLAALAV-LNRMGVATKQVDAK------DEAGLAKALG-GFDAVISAA 77 (118)
T ss_dssp EEEEECCSHHHH-HHHHHHHHCSSEEEEEEESCHHHHHH-HHTTTCEEEECCTT------CHHHHHHHTT-TCSEEEECS
T ss_pred eEEEECCCHHHH-HHHHHHHhCCCceEEEEeCCHHHHHH-HHhCCCcEEEecCC------CHHHHHHHHc-CCCEEEECC
Confidence 465554433333 3445555667 667776654433332 33456665443322 4677777775 567777765
Q ss_pred CCCCcccCCCHHHHHHHHHHHHHcCcEEE
Q 013883 251 PHNPTGKMFTREELNVIASLCIENDVLVF 279 (434)
Q Consensus 251 p~NPTG~~~~~e~l~~i~~la~~~~~~iI 279 (434)
|.. .-..+.+.|.+.++..+
T Consensus 78 ~~~---------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 78 PFF---------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp CGG---------GHHHHHHHHHHTTCEEE
T ss_pred Cch---------hhHHHHHHHHHhCCCEE
Confidence 422 13567788888887765
No 331
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=59.24 E-value=16 Score=36.45 Aligned_cols=25 Identities=20% Similarity=0.341 Sum_probs=23.0
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 256 GKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
|-.++.+++++|++.|+++++-||-
T Consensus 225 ~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 225 GGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 5689999999999999999999984
No 332
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=58.97 E-value=44 Score=29.83 Aligned_cols=94 Identities=11% Similarity=0.081 Sum_probs=52.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH---HcCC---EEEEEEcCCCCCCCCHHHHHhhccc----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS---MAGA---KIKCITLRPPDFAIPIEELKSTISK---- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~G~---~~~~v~~~~~~~~~d~~~l~~~i~~---- 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-........ ..|. ++..+..|-. |.+.+++++..
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 8 TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT----TEDGQDQIINSTLKQ 83 (280)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTT----SHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCC----CHHHHHHHHHHHHHh
Confidence 57777776666677777888889888876544333333322 2344 5666665531 45666655542
Q ss_pred --CCcEEEecCCCCCcc------cCCCHHHHHHHHH
Q 013883 242 --NTRAILMNTPHNPTG------KMFTREELNVIAS 269 (434)
Q Consensus 242 --~~~~i~~~~p~NPTG------~~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+ ...+.++++++.+
T Consensus 84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 119 (280)
T 1xkq_A 84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 119 (280)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHH
Confidence 456666543222222 2346677766554
No 333
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=58.91 E-value=47 Score=27.37 Aligned_cols=80 Identities=13% Similarity=0.059 Sum_probs=55.4
Q ss_pred CCCeEEEcCCCchhHHHHHHHcCCE---EEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHH
Q 013883 193 PGDEVILFAPFYDSYEATLSMAGAK---IKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIAS 269 (434)
Q Consensus 193 ~gd~Vlv~~p~y~~~~~~~~~~G~~---~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~ 269 (434)
.+..|+...|-+..|...+...|++ +..|... +..-.+..+|++++.+.-..++.-+. .++..+.+++.-
T Consensus 74 ~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~--~~~daLwa~EqALrsG~~~aVl~Wl~-----~l~~~~~RRLql 146 (161)
T 1oft_A 74 DARWLTLIAPPASLTHEWLRRAGLNRERILLLQAK--DNAAALALSCEALRLGRSHTVVSWLE-----PLSRAARKQLSR 146 (161)
T ss_dssp SSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCS--STTHHHHHHHHHHHTTCEEEEEECCS-----SCCHHHHHHHHH
T ss_pred cCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECC--ChHHHHHHHHHHHhcCCccEEEECCC-----cCChHHHHHHHH
Confidence 5567777788888899999999985 4445433 22223788899998877655555432 257788999988
Q ss_pred HHHHcCcEEE
Q 013883 270 LCIENDVLVF 279 (434)
Q Consensus 270 la~~~~~~iI 279 (434)
.|++-+...+
T Consensus 147 AAe~g~~~~f 156 (161)
T 1oft_A 147 AAQLGQAQSL 156 (161)
T ss_dssp HHHHTTCEEE
T ss_pred HHHhCCCeEE
Confidence 7877666544
No 334
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=58.86 E-value=67 Score=28.23 Aligned_cols=94 Identities=11% Similarity=0.099 Sum_probs=54.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEc-CCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILF-APFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~-~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++. ...-..... .++..|.++..+..|-. |.+.+++++..
T Consensus 10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 10 TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLT----NAAEVEAAISAAADKFG 85 (259)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTT----CHHHHHHHHHHHHHHHC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCC----CHHHHHHHHHHHHHHhC
Confidence 57777776666677778888889888775 443333322 23445666666666531 45666665542
Q ss_pred CCcEEEecCCCC-Ccc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHN-PTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~N-PTG--~~~~~e~l~~i~~ 269 (434)
+...++.+.-.. +.+ ...+.++|+++.+
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 116 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLD 116 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHH
Confidence 344444432122 222 2457788887765
No 335
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=58.77 E-value=75 Score=28.53 Aligned_cols=95 Identities=14% Similarity=0.151 Sum_probs=56.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchh----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.++||.|+...-..+...|.+.|..|++..-.-.. ....++..|.++..+..|-. |.+.+++++..
T Consensus 49 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 49 NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLS----DEQHCKDIVQETVRQLG 124 (291)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTT----SHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCC----CHHHHHHHHHHHHHHcC
Confidence 67777776666677778888889888775443322 23334556778877776632 45666655532
Q ss_pred CCcEEEecCCC-CCcc--cCCCHHHHHHHHHH
Q 013883 242 NTRAILMNTPH-NPTG--KMFTREELNVIASL 270 (434)
Q Consensus 242 ~~~~i~~~~p~-NPTG--~~~~~e~l~~i~~l 270 (434)
+..+++.+.-. .+.+ ...+.++|+++.++
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~v 156 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRI 156 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 45555554222 2222 13477888877763
No 336
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=58.59 E-value=78 Score=27.80 Aligned_cols=94 Identities=12% Similarity=0.091 Sum_probs=55.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEc-CCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILF-APFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~-~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|-.|++. ...-...... +...|.++..+..|-. |.+.+++++..
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVG----QPAKIKEMFQQIDETFG 81 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC----CHHHHHHHHHHHHHHcC
Confidence 57777776666677778888899887774 4444333333 3445777777776632 45666655532
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+.+ ...+.++|+++.+
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3oid_A 82 RLDVFVNNAASGVLRPVMELEETHWDWTMN 111 (258)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 455665543222222 2457777777655
No 337
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=58.55 E-value=57 Score=28.92 Aligned_cols=94 Identities=15% Similarity=0.098 Sum_probs=52.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+......+...|.+.|..|++.+-.-...... ++..|.++..+..|-. |.+.+++++.. +
T Consensus 33 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~----~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 33 IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCS----NREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHTCC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCC----CHHHHHHHHHHHHHHCCC
Confidence 677777666666667777888898888765443333332 3334667777766531 45666555532 4
Q ss_pred CcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
..+|+.+.-..+.+. ..+.+++++..+
T Consensus 109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~ 137 (272)
T 1yb1_A 109 VSILVNNAGVVYTSDLFATQDPQIEKTFE 137 (272)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHH
T ss_pred CcEEEECCCcCCCcchhhCCHHHHHHHHH
Confidence 566665543333232 123455554443
No 338
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=58.51 E-value=46 Score=28.98 Aligned_cols=94 Identities=14% Similarity=0.119 Sum_probs=56.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCC-CchhH---HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAP-FYDSY---EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p-~y~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++..- .-... ...+...|.++..+..|-. |.+.+++++..
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA----DADEVKAMIKEVVSQFG 81 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCC----CHHHHHHHHHHHHHHcC
Confidence 5777777776667777888889988876433 22222 2234456777777776531 55666655542
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+...++.+.-..+.+ ...+.++|+++.+
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 3osu_A 82 SLDVLVNNAGITRDNLLMRMKEQEWDDVID 111 (246)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 456666543322222 2457788877665
No 339
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=58.40 E-value=62 Score=28.42 Aligned_cols=95 Identities=15% Similarity=0.136 Sum_probs=54.9
Q ss_pred cEEEcCCh-HHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGC-TEAIAATILGLINPGDEVILFAPFYDSYEATLSM----AGAKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~-~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.+++|.|+ ...-..+...|.+.|..|++.+-.-.......+. .+.++..+..|-. |.+.+++++..
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~----~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVT----STEAVDALITQTVEKA 99 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTT----CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCC----CHHHHHHHHHHHHHHh
Confidence 56777664 4566667777888898888876554444443332 2356776766532 45666655532
Q ss_pred -CCcEEEecCCCCCccc--CCCHHHHHHHHHH
Q 013883 242 -NTRAILMNTPHNPTGK--MFTREELNVIASL 270 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG~--~~~~e~l~~i~~l 270 (434)
+..+++.+.-..+.+. ..+.+++++..+.
T Consensus 100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 131 (266)
T 3o38_A 100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNV 131 (266)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCcEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 4566665433322222 3577777776653
No 340
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=58.04 E-value=20 Score=27.94 Aligned_cols=101 Identities=11% Similarity=0.052 Sum_probs=63.4
Q ss_pred cEEEcCChHHHHHHH---HHHccC--CCCeEEEcCCCchhHHHHHHHcCCE---EEEEEcCCCCCCCCHHHHHhhcccCC
Q 013883 172 EVTVTSGCTEAIAAT---ILGLIN--PGDEVILFAPFYDSYEATLSMAGAK---IKCITLRPPDFAIPIEELKSTISKNT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~---~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~---~~~v~~~~~~~~~d~~~l~~~i~~~~ 243 (434)
+++....+..-+.++ +..+.+ .+..|+...|.+..+...+...|++ +..+.... ..-.+..+|++++.+.
T Consensus 6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~--~~d~lwa~EqaLrsg~ 83 (119)
T 1ofu_X 6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKD--NAAALALSCEALRLGR 83 (119)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSS--HHHHHHHHHHHHHHTC
T ss_pred EEeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCC--cHHHHHHHHHHHhcCC
Confidence 354444333333333 334443 5567777788888899999999975 55554332 1113677888898877
Q ss_pred cEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEE
Q 013883 244 RAILMNTPHNPTGKMFTREELNVIASLCIENDVLVF 279 (434)
Q Consensus 244 ~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI 279 (434)
-..++.-+. .++..+.+++.-.|++-+...+
T Consensus 84 ~~aVl~wl~-----~l~~~~~RRLqlAA~~g~~~~~ 114 (119)
T 1ofu_X 84 SHTVVSWLE-----PLSRAARKQLSRAAQLGQAQSL 114 (119)
T ss_dssp EEEEEECCS-----SCCHHHHHHHHHHHHHHTCEEE
T ss_pred ccEEEECCC-----cCChHHHHHHHHHHHhCCCeEE
Confidence 655555432 2577789999888887666544
No 341
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=58.03 E-value=61 Score=29.21 Aligned_cols=94 Identities=9% Similarity=0.015 Sum_probs=52.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 36 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~ 111 (291)
T 3cxt_A 36 IALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVT----DEDGIQAMVAQIESEVGI 111 (291)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTT----CHHHHHHHHHHHHHHTCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCC----CHHHHHHHHHHHHHHcCC
Confidence 577777766666677778888898887765433322222 2334556666665531 45666655543 4
Q ss_pred CcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
..+++.+.-..+.+ ...+.++|+++.+
T Consensus 112 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 140 (291)
T 3cxt_A 112 IDILVNNAGIIRRVPMIEMTAAQFRQVID 140 (291)
T ss_dssp CCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 55665543222222 1346777776543
No 342
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=57.94 E-value=68 Score=28.23 Aligned_cols=94 Identities=17% Similarity=0.159 Sum_probs=55.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHH---HHcC-CEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATL---SMAG-AKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~G-~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-....... ...+ .++..+..|-. |.+.+++++..
T Consensus 12 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 12 SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVS----DRAQCDALAGRAVEEFG 87 (262)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTT----SHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCC----CHHHHHHHHHHHHHHhC
Confidence 6777777766667777788888988888765544443332 2233 46666666531 45666555432
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+.+ ...+.++|+++.+
T Consensus 88 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 88 GIDVVCANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp CCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 556666543322222 2447778777654
No 343
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=57.93 E-value=15 Score=36.63 Aligned_cols=107 Identities=12% Similarity=0.164 Sum_probs=58.9
Q ss_pred CCCCCCCcEEEcCChHHHHHHHHHHcc----CC--CC-----eEEEcCCCchh-------------------HHHHHHHc
Q 013883 165 LEVDPEKEVTVTSGCTEAIAATILGLI----NP--GD-----EVILFAPFYDS-------------------YEATLSMA 214 (434)
Q Consensus 165 ~~~~~~~~i~~t~G~~~ai~~~~~~l~----~~--gd-----~Vlv~~p~y~~-------------------~~~~~~~~ 214 (434)
+.++++ .|.++.....++...+++|. .. |. ..+...|.|.- +.+.+..+
T Consensus 96 L~v~~~-~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~ 174 (507)
T 2gjx_A 96 LTINDD-QCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYN 174 (507)
T ss_dssp EEESSS-CEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHT
T ss_pred EEEeCC-eEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHh
Confidence 345555 68887666655555555442 11 21 12334455431 34445566
Q ss_pred CCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 215 GAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 215 G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
++++...-+.+ .+|.+..+.+-++-..+ ...|.|..++++++++|++.|+++++-||-
T Consensus 175 KlN~lh~HltDdq~wr~ei~~~P~Lt~~G--------a~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 175 KLNVFHWHLVDDPSFPYESFTFPELMRKG--------SYNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp TCCEEEEECCCSSCCCBCCSSCTHHHHHH--------SSCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEecccCeeeeccccchhhhcc--------ccCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 77776665543 23433322111110000 012445679999999999999999999984
No 344
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=57.75 E-value=73 Score=28.53 Aligned_cols=94 Identities=17% Similarity=0.183 Sum_probs=53.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM----AGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+......+...|.+.|..|++.+-.-......... .|.++..+..|-. |.+.+++++..
T Consensus 28 ~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~----~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 28 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVR----DPDMVQNTVSELIKVAG 103 (302)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT----CHHHHHHHHHHHHHHTC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC----CHHHHHHHHHHHHHHcC
Confidence 577777766666677778888898888765544333333222 2666776766531 45666655532
Q ss_pred CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+. ..+.+++++..+
T Consensus 104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 133 (302)
T 1w6u_A 104 HPNIVINNAAGNFISPTERLSPNAWKTITD 133 (302)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 4566665433222221 346666665543
No 345
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=57.72 E-value=76 Score=28.40 Aligned_cols=94 Identities=14% Similarity=0.070 Sum_probs=56.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH---HcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS---MAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-........ ..|.++..+..|-. |.+.+++++.. +
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVS----DELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC----CHHHHHHHHHHHHHHhCC
Confidence 56777776666677777888889888887655444444333 34667777776531 55666665543 4
Q ss_pred CcEEEecCCCC-Ccc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHN-PTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~N-PTG--~~~~~e~l~~i~~ 269 (434)
..+++.+.-.. +.+ ...+.++|+++.+
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIA 135 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 56665543222 112 2457777877665
No 346
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=57.61 E-value=48 Score=30.03 Aligned_cols=94 Identities=16% Similarity=0.118 Sum_probs=52.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCC---EEEEEEcCCCCCCCCHHHHHhhccc----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGA---KIKCITLRPPDFAIPIEELKSTISK---- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~---~~~~v~~~~~~~~~d~~~l~~~i~~---- 241 (434)
.+++|.|+...-..+...|.+.|..|++..-.-...... +...|. ++..+..|-. |.+.+++++..
T Consensus 28 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT----EASGQDDIINTTLAK 103 (297)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT----SHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCC----CHHHHHHHHHHHHHh
Confidence 577777766666777778888898888765443333322 222344 5666665531 45666655542
Q ss_pred --CCcEEEecCCCCCcc----cCCCHHHHHHHHH
Q 013883 242 --NTRAILMNTPHNPTG----KMFTREELNVIAS 269 (434)
Q Consensus 242 --~~~~i~~~~p~NPTG----~~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+ ...+.++|+++.+
T Consensus 104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~ 137 (297)
T 1xhl_A 104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFK 137 (297)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHh
Confidence 456666543322222 1346777766543
No 347
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=57.37 E-value=75 Score=27.73 Aligned_cols=94 Identities=13% Similarity=0.075 Sum_probs=53.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCc-hhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFY-DSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTR 244 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~ 244 (434)
.+++|.|+...-..+...|.+.|..|++.+-.- ......+...|.++..+..|- -|.+.+++++.. +..
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~----~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 6 TALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADL----SDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCT----TSHHHHHHHHHHHHHHHSSCS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCC----CCHHHHHHHHHHHHHHcCCCC
Confidence 577777766666677778888898877754322 222233333466666665552 156666665542 556
Q ss_pred EEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 245 AILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 245 ~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+++.+.-..+.+ ...+.++|+++.+
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (255)
T 2q2v_A 82 ILVNNAGIQHVAPVEQFPLESWDKIIA 108 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 666543322222 2346777776554
No 348
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=57.25 E-value=92 Score=26.67 Aligned_cols=94 Identities=13% Similarity=0.130 Sum_probs=53.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEE-cCCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVIL-FAPFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv-~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++ ..-.-..... .++..+.++..+..|-. |.+.+++++..
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS----KEADVEAMMKTAIDAWG 78 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTT----SHHHHHHHHHHHHHHSS
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCC----CHHHHHHHHHHHHHHcC
Confidence 4677766666666777778888888876 3433322222 23334667777766531 56666666543
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+ ...+.+++++..+
T Consensus 79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (244)
T 1edo_A 79 TIDVVVNNAGITRDTLLIRMKKSQWDEVID 108 (244)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 566676553322222 1346667666544
No 349
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=56.57 E-value=91 Score=27.22 Aligned_cols=94 Identities=14% Similarity=0.045 Sum_probs=51.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhcc-------c
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTIS-------K 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-------~ 241 (434)
.+++|.|+...-..+...|.+.|..|++..-.-...... +...|.++..+..|-. |.+.+++++. .
T Consensus 16 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 16 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDAS----LRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----SHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCC----CHHHHHHHHHHHHHHhCC
Confidence 577777666666677777888888887765443333222 2334666666665531 4556665553 3
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+.+ ...+.+++++..+
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (266)
T 1xq1_A 92 KLDILINNLGAIRSKPTLDYTAEDFSFHIS 121 (266)
T ss_dssp CCSEEEEECCC------CCCCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 566776654322222 2346666665543
No 350
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=56.30 E-value=83 Score=27.21 Aligned_cols=94 Identities=11% Similarity=0.066 Sum_probs=54.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCC-chhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPF-YDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~-y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|.+|++..-. -..... .+...|.++..+..|-. |.+.+++++..
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 9 RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLA----TSEACQQLVDEFVAKFG 84 (258)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTT----SHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCC----CHHHHHHHHHHHHHHcC
Confidence 57777776666667777788888887765433 222222 23334667777766532 56666666542
Q ss_pred CCcEEEecCCC-CCccc--CCCHHHHHHHHH
Q 013883 242 NTRAILMNTPH-NPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~-NPTG~--~~~~e~l~~i~~ 269 (434)
+..+|+.+... .+.+. ..+.++++++.+
T Consensus 85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp SCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 56677665332 22221 345666666554
No 351
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=56.13 E-value=55 Score=28.69 Aligned_cols=94 Identities=18% Similarity=0.112 Sum_probs=51.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchh--HHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS--YEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~--~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-.. .... +...|.++..+..|-. |.+.+++++..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT----DKANFDSAIDEAAEKL 79 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTT----CHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCC----CHHHHHHHHHHHHHHh
Confidence 46677666666666777788888887775433222 2222 2334667777766531 45666655542
Q ss_pred -CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 -NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+.+. ..+.++|+++.+
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYS 110 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 4566655433222221 346777776554
No 352
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=55.85 E-value=84 Score=27.69 Aligned_cols=94 Identities=7% Similarity=0.052 Sum_probs=53.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHH----HcCCEEEEEEcCCCCCCCCHHHHHhhcc---c---
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS----MAGAKIKCITLRPPDFAIPIEELKSTIS---K--- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~v~~~~~~~~~d~~~l~~~i~---~--- 241 (434)
.+++|.|+...-..+...|.+.|-.|++..-.-........ ..|.++..+..|-. |.+.+++++. +
T Consensus 22 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g 97 (266)
T 4egf_A 22 RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA----EPDAPAELARRAAEAFG 97 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT----STTHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC----CHHHHHHHHHHHHHHcC
Confidence 56777666666667777888889888877655444333322 25777777777632 2333333332 1
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+ ...+.++|++..+
T Consensus 98 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 127 (266)
T 4egf_A 98 GLDVLVNNAGISHPQPVVDTDPQLFDATIA 127 (266)
T ss_dssp SCSEEEEECCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 456666543322222 2357777777654
No 353
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=55.66 E-value=92 Score=27.28 Aligned_cols=94 Identities=14% Similarity=0.162 Sum_probs=53.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|..|++..-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 9 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVT----SEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC----CHHHHHHHHHHHHHHhCC
Confidence 577777766666777778888898887765433333222 2334666776766531 45666555432 4
Q ss_pred CcEEEecCCCC-Ccc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHN-PTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~N-PTG--~~~~~e~l~~i~~ 269 (434)
..+++.+.-.. +.+ ...+.++|+++.+
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHH
Confidence 56665543222 222 1346777776654
No 354
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=55.02 E-value=90 Score=27.96 Aligned_cols=94 Identities=14% Similarity=0.146 Sum_probs=53.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH--------cCCEEEEEEcCCCCCCCCHHHHHhhccc--
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM--------AGAKIKCITLRPPDFAIPIEELKSTISK-- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~--------~G~~~~~v~~~~~~~~~d~~~l~~~i~~-- 241 (434)
.+++|.|+......+...|.+.|..|++..-.-.......+. .+.++..+..|-. |.+.+++++..
T Consensus 20 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 20 VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIR----NEEEVNNLVKSTL 95 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTT----CHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCC----CHHHHHHHHHHHH
Confidence 577777666666667777888888887765443333322221 3556766666531 45666665543
Q ss_pred ----CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 ----NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ----~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+|+.+.-....+ ...+.+++++..+
T Consensus 96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 129 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLE 129 (303)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 466666543322222 2346666665543
No 355
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=54.49 E-value=75 Score=27.14 Aligned_cols=93 Identities=16% Similarity=0.021 Sum_probs=49.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+......+...|.+.|..|++..-.-..........+ ++..+..|- -|.+.+++++.. +..+
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~----~~~~~~~~~~~~~~~~~~~id~ 81 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-GALPLPGDV----REEGDWARAVAAMEEAFGELSA 81 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCT----TCHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-hceEEEecC----CCHHHHHHHHHHHHHHcCCCCE
Confidence 57777776666667777788889888776544333333333332 233344332 145666555432 4566
Q ss_pred EEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
++.+.-..+.+ ...+.++++++.+
T Consensus 82 li~~Ag~~~~~~~~~~~~~~~~~~~~ 107 (234)
T 2ehd_A 82 LVNNAGVGVMKPVHELTLEEWRLVLD 107 (234)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHH
Confidence 66543322222 1346666665443
No 356
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=54.36 E-value=95 Score=27.23 Aligned_cols=94 Identities=12% Similarity=0.075 Sum_probs=51.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCC--EEEEEEcCCCCCCCCHHHHHhhccc------CC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGA--KIKCITLRPPDFAIPIEELKSTISK------NT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~------~~ 243 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-..........+. ++..+..|-. |.+.+++++.. +.
T Consensus 18 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~~i 93 (278)
T 2bgk_A 18 VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVT----KDEDVRNLVDTTIAKHGKL 93 (278)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTT----CHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCC----CHHHHHHHHHHHHHHcCCC
Confidence 577777766666677778888888887765443333333333322 4555555421 56666666542 56
Q ss_pred cEEEecCCCCC--cc--cCCCHHHHHHHHH
Q 013883 244 RAILMNTPHNP--TG--KMFTREELNVIAS 269 (434)
Q Consensus 244 ~~i~~~~p~NP--TG--~~~~~e~l~~i~~ 269 (434)
.+++.+.-... .+ ...+.+++++..+
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 123 (278)
T 2bgk_A 94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMD 123 (278)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHH
T ss_pred CEEEECCcccCCCCCChhhCCHHHHHHHHH
Confidence 66665432111 11 2345566665544
No 357
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=54.05 E-value=59 Score=28.80 Aligned_cols=74 Identities=12% Similarity=0.096 Sum_probs=42.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHc------CCEEEEEEcCCCCCCCCHHHHHhhccc----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA------GAKIKCITLRPPDFAIPIEELKSTISK---- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~------G~~~~~v~~~~~~~~~d~~~l~~~i~~---- 241 (434)
.+++|.|+...-..+...|.+.|..|++..-.-.......+.. +.++..+..|-. |.+.+++++..
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 8 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT----TDAGQDEILSTTLGK 83 (278)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT----SHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccC----CHHHHHHHHHHHHHH
Confidence 5677766666666677778888988877654433333332222 345666655521 45666665542
Q ss_pred --CCcEEEec
Q 013883 242 --NTRAILMN 249 (434)
Q Consensus 242 --~~~~i~~~ 249 (434)
+..+++.+
T Consensus 84 ~g~id~lv~~ 93 (278)
T 1spx_A 84 FGKLDILVNN 93 (278)
T ss_dssp HSCCCEEEEC
T ss_pred cCCCCEEEEC
Confidence 45666554
No 358
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=53.86 E-value=62 Score=28.27 Aligned_cols=94 Identities=13% Similarity=0.090 Sum_probs=53.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++..-.-..........+.++..+..|-. |.+.+++++.. +..+
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g~iD~ 77 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVR----NRAAIEEMLASLPAEWCNIDI 77 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT----CHHHHHHHHHTSCTTTCCCCE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCC----CHHHHHHHHHHHHHhCCCCCE
Confidence 3666666555556667778888988887655444444444445555666665531 45666665542 3455
Q ss_pred EEecCCCC-Ccc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHN-PTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~N-PTG--~~~~~e~l~~i~~ 269 (434)
++.+.-.. +.+ ...+.++++++.+
T Consensus 78 lvnnAg~~~~~~~~~~~~~~~~~~~~~ 104 (248)
T 3asu_A 78 LVNNAGLALGMEPAHKASVEDWETMID 104 (248)
T ss_dssp EEECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred EEECCCcCCCCCchhhCCHHHHHHHHH
Confidence 55432221 111 2456777776654
No 359
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=53.78 E-value=31 Score=30.55 Aligned_cols=91 Identities=18% Similarity=0.183 Sum_probs=54.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--CCcEEEec
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK--NTRAILMN 249 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~~~i~~~ 249 (434)
.+++|.|+...-..+...|.+.|-.|++.+-.-... -...+.++..+..|-. |.+.+++.++. +..+ +++
T Consensus 13 ~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~---~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~g~iDi-LVN 84 (242)
T 4b79_A 13 QVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV---HAPRHPRIRREELDIT----DSQRLQRLFEALPRLDV-LVN 84 (242)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST---TSCCCTTEEEEECCTT----CHHHHHHHHHHCSCCSE-EEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---hhhhcCCeEEEEecCC----CHHHHHHHHHhcCCCCE-EEE
Confidence 566776666666777788889998888765332211 1223445666665531 45667766654 3444 444
Q ss_pred CC-CCCcccCCCHHHHHHHHHH
Q 013883 250 TP-HNPTGKMFTREELNVIASL 270 (434)
Q Consensus 250 ~p-~NPTG~~~~~e~l~~i~~l 270 (434)
|. .+.....++.++|+++.++
T Consensus 85 NAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 85 NAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp CCCCCCGGGGGSHHHHHHHHHH
T ss_pred CCCCCCCcccCCHHHHHHHHHH
Confidence 44 3334456788899988774
No 360
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=53.60 E-value=95 Score=27.32 Aligned_cols=100 Identities=15% Similarity=0.140 Sum_probs=61.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEE-E--cCCC-----------chhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHh
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVI-L--FAPF-----------YDSYEATLSMAGAKIKCITLRPPDFAIPIEELKS 237 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vl-v--~~p~-----------y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~ 237 (434)
-+++-+||.....++..+. +.|-+|. + ..|. ......+++.+|++...+++..++ .--++.+.+
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~-~~e~e~l~~ 84 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEK-EKEVEDLKR 84 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC-------CHHHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCc-hHHHHHHHH
Confidence 4677788888777665543 4455443 2 1111 122456788899999888876421 223677777
Q ss_pred hccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 238 TISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 238 ~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+++. +..+++ +|.+.+..+...+-+.|.+.|+.++.
T Consensus 85 ~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~~ 121 (237)
T 3rjz_A 85 VLSGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEVYT 121 (237)
T ss_dssp HHTTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEEEC
T ss_pred HHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEEc
Confidence 7765 455555 67777777888899999999988875
No 361
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=53.51 E-value=1.2e+02 Score=26.91 Aligned_cols=93 Identities=11% Similarity=0.129 Sum_probs=53.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc---c--CC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTIS---K--NT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~---~--~~ 243 (434)
.++||.|+...-..+...|.+.|..|++.+-. ..... .+...|.++..+..|-. |.+.++++.. . +.
T Consensus 33 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~g~i 107 (273)
T 3uf0_A 33 TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLA----DLEGAANVAEELAATRRV 107 (273)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTT----CHHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCC----CHHHHHHHHHHHHhcCCC
Confidence 57777776666677777888889888776532 22222 23345777877776632 4444444322 1 45
Q ss_pred cEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 244 RAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 244 ~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
.+++.+.-....+ ...+.++|+++.+
T Consensus 108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (273)
T 3uf0_A 108 DVLVNNAGIIARAPAEEVSLGRWREVLT 135 (273)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 6665543222222 1347777877665
No 362
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=53.44 E-value=63 Score=28.90 Aligned_cols=78 Identities=10% Similarity=0.039 Sum_probs=43.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCc-hhHHHHH---H-HcCCEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFY-DSYEATL---S-MAGAKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~---~-~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.++||.|+...-..+...|.+.|..|++..-.- ....... . ..|.++..+..|-.+..-+.+.+++++..
T Consensus 25 ~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~ 104 (288)
T 2x9g_A 25 AAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAF 104 (288)
T ss_dssp EEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHhc
Confidence 577777766666677777888888877754433 3322222 2 34667777766532211115556555542
Q ss_pred -CCcEEEec
Q 013883 242 -NTRAILMN 249 (434)
Q Consensus 242 -~~~~i~~~ 249 (434)
+..+++.+
T Consensus 105 g~iD~lvnn 113 (288)
T 2x9g_A 105 GRCDVLVNN 113 (288)
T ss_dssp SCCCEEEEC
T ss_pred CCCCEEEEC
Confidence 45666554
No 363
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=53.22 E-value=41 Score=28.58 Aligned_cols=94 Identities=7% Similarity=-0.010 Sum_probs=51.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCC-HHHHHhhcccCCcEEEecC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIP-IEELKSTISKNTRAILMNT 250 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d-~~~l~~~i~~~~~~i~~~~ 250 (434)
.|++|.|+......+...|++.|.+|++..-.-..... ..+ +..+..|- .| .+.+++++. +..+|+.+.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~--~~~~~~D~----~d~~~~~~~~~~-~~d~vi~~a 71 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---YNN--VKAVHFDV----DWTPEEMAKQLH-GMDAIINVS 71 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---CTT--EEEEECCT----TSCHHHHHTTTT-TCSEEEECC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---cCC--ceEEEecc----cCCHHHHHHHHc-CCCEEEECC
Confidence 36777666666667778888888777765432221110 023 33344332 15 788888876 567777654
Q ss_pred CCC-CcccCCCHHHHHHHHHHHHHcC
Q 013883 251 PHN-PTGKMFTREELNVIASLCIEND 275 (434)
Q Consensus 251 p~N-PTG~~~~~e~l~~i~~la~~~~ 275 (434)
... +.-......-...+++.|++.+
T Consensus 72 g~~~~~~~~~n~~~~~~l~~a~~~~~ 97 (219)
T 3dqp_A 72 GSGGKSLLKVDLYGAVKLMQAAEKAE 97 (219)
T ss_dssp CCTTSSCCCCCCHHHHHHHHHHHHTT
T ss_pred cCCCCCcEeEeHHHHHHHHHHHHHhC
Confidence 322 2211222333556777776654
No 364
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=52.77 E-value=1e+02 Score=26.72 Aligned_cols=94 Identities=9% Similarity=0.069 Sum_probs=52.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCC-CchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAP-FYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p-~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|.+|++..- .-..... .+...+.++..+..|-. |.+.+++++..
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVT----VESDVINLVQSAIKEFG 84 (261)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTT----SHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCC----CHHHHHHHHHHHHHHcC
Confidence 5777777666666777778888888777544 3222222 23334667777766532 45666655542
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+....+.+ ...+.+++++..+
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 1gee_A 85 KLDVMINNAGLENPVSSHEMSLSDWNKVID 114 (261)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 556666553322222 1345666665443
No 365
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=52.66 E-value=52 Score=28.81 Aligned_cols=94 Identities=13% Similarity=0.065 Sum_probs=51.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHc-----C-CEEEEEEcCCCCCCCCHHHHHhhccc----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-----G-AKIKCITLRPPDFAIPIEELKSTISK---- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-----G-~~~~~v~~~~~~~~~d~~~l~~~i~~---- 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-.......+.. + .++..++.|-. |.+.+++++..
T Consensus 9 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 9 LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT----DCTKADTEIKDIHQK 84 (250)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTT----CHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCC----CHHHHHHHHHHHHHh
Confidence 5667766666666677778888988888765554444333221 2 45555665531 45666655542
Q ss_pred --CCcEEEecCCCC-CcccCCCHHHHHHHHH
Q 013883 242 --NTRAILMNTPHN-PTGKMFTREELNVIAS 269 (434)
Q Consensus 242 --~~~~i~~~~p~N-PTG~~~~~e~l~~i~~ 269 (434)
+..+++.+.-.. +.....+.++|++..+
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 115 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIME 115 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHH
Confidence 344454433222 2222445666766554
No 366
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=52.52 E-value=82 Score=27.06 Aligned_cols=94 Identities=14% Similarity=0.139 Sum_probs=51.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCC-------eEEEcCCCchhHHHHH---HHcCCEEEEEEcCCCCCCCCHHHHHhhccc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGD-------EVILFAPFYDSYEATL---SMAGAKIKCITLRPPDFAIPIEELKSTISK 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd-------~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~ 241 (434)
.+++|.|+......+...|.+.|. .|++..-.-....... ...+.++..+..|-. |.+.+++++..
T Consensus 4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~ 79 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADIS----DMADVRRLTTH 79 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTT----SHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCC----CHHHHHHHHHH
Confidence 466666655555666677777776 6776554433333322 223667777766531 45666665542
Q ss_pred ------CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 ------NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ------~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+.+ ...+.++++++.+
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMN 115 (244)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHH
Confidence 566666553322222 1246667766554
No 367
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=51.97 E-value=1.1e+02 Score=29.40 Aligned_cols=65 Identities=17% Similarity=-0.008 Sum_probs=36.7
Q ss_pred cEEEcCChHHHHHHHHHHccC-CCCeEEEcCC---C---------chh---HHHHHHHcCCEEEEEEcCCCCCCCCHHHH
Q 013883 172 EVTVTSGCTEAIAATILGLIN-PGDEVILFAP---F---------YDS---YEATLSMAGAKIKCITLRPPDFAIPIEEL 235 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~-~gd~Vlv~~p---~---------y~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l 235 (434)
.+++|.|+...-..+...|.. .|-.|++.+- . |.+ ....+...|.+...+..|-. |.+.+
T Consensus 49 vaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt----d~~~v 124 (405)
T 3zu3_A 49 RVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF----SDEIK 124 (405)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT----SHHHH
T ss_pred EEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC----CHHHH
Confidence 556666655555556667777 7877765321 1 111 22345567888887776631 45555
Q ss_pred Hhhcc
Q 013883 236 KSTIS 240 (434)
Q Consensus 236 ~~~i~ 240 (434)
++++.
T Consensus 125 ~~~v~ 129 (405)
T 3zu3_A 125 QLTID 129 (405)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 368
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=51.67 E-value=64 Score=28.52 Aligned_cols=96 Identities=13% Similarity=0.148 Sum_probs=52.7
Q ss_pred cEEEcCChHHHHHHHHHHccCC--CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEec
Q 013883 172 EVTVTSGCTEAIAATILGLINP--GDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMN 249 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~ 249 (434)
.|++|.|+......++..|++. |.+|.+..-.-.... .+...+.+++...+. |.+.+++++. +..+|+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~l~~~~~~~~~~D~~------d~~~l~~~~~-~~d~vi~~ 73 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-TLADQGVEVRHGDYN------QPESLQKAFA-GVSKLLFI 73 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-HHHHTTCEEEECCTT------CHHHHHHHTT-TCSEEEEC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-HHhhcCCeEEEeccC------CHHHHHHHHh-cCCEEEEc
Confidence 4677766555556667777776 766655432211111 122345555443332 6788888876 46777765
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHHcCc
Q 013883 250 TPHNPTGKMFTREELNVIASLCIENDV 276 (434)
Q Consensus 250 ~p~NPTG~~~~~e~l~~i~~la~~~~~ 276 (434)
...++. .....+....+++.|++.++
T Consensus 74 a~~~~~-~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 74 SGPHYD-NTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp CCCCSC-HHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCcC-chHHHHHHHHHHHHHHHcCC
Confidence 443221 10012345678888888765
No 369
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=51.53 E-value=1e+02 Score=27.54 Aligned_cols=94 Identities=12% Similarity=0.039 Sum_probs=55.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH---cCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM---AGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.++||.|+...-..+...|.+.|-.|++.+-.-......... .|.++..+..|-. |.+.+++++.. +
T Consensus 10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 10 IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVG----DEALHEALVELAVRRFGG 85 (280)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC----CHHHHHHHHHHHHHHcCC
Confidence 567776666666677778888898888877655544444333 3566666655421 45556555532 4
Q ss_pred CcEEEecCCCC-Cccc--CCCHHHHHHHHH
Q 013883 243 TRAILMNTPHN-PTGK--MFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~N-PTG~--~~~~e~l~~i~~ 269 (434)
..+++.+.-.. +.+. ..+.++++++.+
T Consensus 86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 3tox_A 86 LDTAFNNAGALGAMGEISSLSVEGWRETLD 115 (280)
T ss_dssp CCEEEECCCCCCSCSCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 55555443211 2221 457777777655
No 370
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=51.13 E-value=89 Score=28.06 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=55.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCch--h---HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYD--S---YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~--~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.++||.|+...-..+...|.+.|..|++..-.-. . ....++..|.++..+..|-. |.+.+++++..
T Consensus 51 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 51 KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLS----DESFARSLVHKAREAL 126 (294)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTT----SHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCC----CHHHHHHHHHHHHHHc
Confidence 6777777666667777888889988887543311 1 22334556777776665531 45555555532
Q ss_pred -CCcEEEecCCC-CCcc--cCCCHHHHHHHHHH
Q 013883 242 -NTRAILMNTPH-NPTG--KMFTREELNVIASL 270 (434)
Q Consensus 242 -~~~~i~~~~p~-NPTG--~~~~~e~l~~i~~l 270 (434)
+..+++.+.-. .+.+ ...+.++|+++.++
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 45566554322 1122 24578888887764
No 371
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=50.89 E-value=98 Score=26.98 Aligned_cols=91 Identities=14% Similarity=0.087 Sum_probs=49.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-.. ....+..+ + ..+..|- -|.+.+++++.. +..+
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~----~~~~~~~~~~~~~~~~~g~iD~ 80 (256)
T 2d1y_A 8 GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-G-AFFQVDL----EDERERVRFVEEAAYALGRVDV 80 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCT----TCHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeC----CCHHHHHHHHHHHHHHcCCCCE
Confidence 57777766666667777888889887775433333 33334333 2 3344442 145566655532 4566
Q ss_pred EEecCCCCCccc--CCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
++.+.-..+.+. ..+.++|+++.+
T Consensus 81 lv~~Ag~~~~~~~~~~~~~~~~~~~~ 106 (256)
T 2d1y_A 81 LVNNAAIAAPGSALTVRLPEWRRVLE 106 (256)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 665433222222 346677776554
No 372
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=50.87 E-value=1.2e+02 Score=25.96 Aligned_cols=93 Identities=11% Similarity=0.115 Sum_probs=50.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEc-CCCchhHHHH---HHHcCCEEEE-EEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILF-APFYDSYEAT---LSMAGAKIKC-ITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~-~p~y~~~~~~---~~~~G~~~~~-v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.+++|.|+...-..+...|.+.|..|++. .-.-...... +...|.++.. +..|- -|.+.+++++..
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~----~~~~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL----LEAEAATALVHQAAEVL 78 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCT----TSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccC----CCHHHHHHHHHHHHHhc
Confidence 47777776666667777888889888775 4433332222 2334555544 55442 145666655432
Q ss_pred -CCcEEEecCCCCCcc--cCCCHHHHHHHH
Q 013883 242 -NTRAILMNTPHNPTG--KMFTREELNVIA 268 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG--~~~~~e~l~~i~ 268 (434)
+..+++.+....+.+ ...+.+++++..
T Consensus 79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~ 108 (245)
T 2ph3_A 79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVL 108 (245)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHH
Confidence 566676553322222 234566665544
No 373
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=50.53 E-value=53 Score=29.32 Aligned_cols=93 Identities=13% Similarity=0.100 Sum_probs=50.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH---cCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM---AGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|.+|++.+-.-.......+. .| ++..+..|- -|.+.+++++.. +
T Consensus 31 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv----~d~~~v~~~~~~~~~~~g~ 105 (276)
T 2b4q_A 31 IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADL----SSEAGARRLAQALGELSAR 105 (276)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCT----TSHHHHHHHHHHHHHHCSC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeC----CCHHHHHHHHHHHHHhcCC
Confidence 567776666666667777888898888766544433333332 23 455454442 145666655542 4
Q ss_pred CcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
..+++.+.-....+ ...+.++|+++.+
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (276)
T 2b4q_A 106 LDILVNNAGTSWGAALESYPVSGWEKVMQ 134 (276)
T ss_dssp CSEEEECCCCCCCCCTTSCCSHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 56666543222222 1345667766554
No 374
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=50.39 E-value=73 Score=28.63 Aligned_cols=95 Identities=18% Similarity=0.218 Sum_probs=52.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCC---eEEEcCCCchhHHHHHHH-----cCCEEEEEEcCCCCCCCCHHHHHhhccc--
Q 013883 172 EVTVTSGCTEAIAATILGLINPGD---EVILFAPFYDSYEATLSM-----AGAKIKCITLRPPDFAIPIEELKSTISK-- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd---~Vlv~~p~y~~~~~~~~~-----~G~~~~~v~~~~~~~~~d~~~l~~~i~~-- 241 (434)
.++||.|+...-..+...|.+.|. .|++..-.-.......+. .|.++..+..|-. |.+.+++++..
T Consensus 35 ~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~ 110 (287)
T 3rku_A 35 TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT----QAEKIKPFIENLP 110 (287)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT----CGGGHHHHHHTSC
T ss_pred EEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC----CHHHHHHHHHHHH
Confidence 566776666555666677776665 777765554444443332 2678887777632 34455544432
Q ss_pred ----CCcEEEecCCCC-Ccc--cCCCHHHHHHHHHH
Q 013883 242 ----NTRAILMNTPHN-PTG--KMFTREELNVIASL 270 (434)
Q Consensus 242 ----~~~~i~~~~p~N-PTG--~~~~~e~l~~i~~l 270 (434)
+..+++.+.-.. +.+ ...+.++|+++.++
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 345555432222 122 13477888876653
No 375
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=50.04 E-value=77 Score=27.78 Aligned_cols=94 Identities=15% Similarity=0.071 Sum_probs=52.6
Q ss_pred cEEEcCCh--HHHHHHHHHHccCCCCeEEEcCCCch-----hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc---
Q 013883 172 EVTVTSGC--TEAIAATILGLINPGDEVILFAPFYD-----SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK--- 241 (434)
Q Consensus 172 ~i~~t~G~--~~ai~~~~~~l~~~gd~Vlv~~p~y~-----~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--- 241 (434)
.+++|.|+ ...-..+...|.+.|..|++..-.-. ....+....|.++..+..|-. |.+.++++++.
T Consensus 22 ~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~----~~~~v~~~~~~~~~ 97 (267)
T 3gdg_A 22 VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVD----SYESCEKLVKDVVA 97 (267)
T ss_dssp EEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTT----CHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCC----CHHHHHHHHHHHHH
Confidence 56777665 45555667778888988877543322 122333345777776666531 45666555532
Q ss_pred ---CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 ---NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ---~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+.+ ...+.++++++.+
T Consensus 98 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 130 (267)
T 3gdg_A 98 DFGQIDAFIANAGATADSGILDGSVEAWNHVVQ 130 (267)
T ss_dssp HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 456666543322222 2346777776654
No 376
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=49.79 E-value=98 Score=27.48 Aligned_cols=97 Identities=16% Similarity=0.133 Sum_probs=53.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchh---HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc--cCCcEE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS---YEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS--KNTRAI 246 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~--~~~~~i 246 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-.. ....+...|.++..+..|-.+. -+++.+.+.+. .+..++
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~g~iD~l 113 (275)
T 4imr_A 35 TALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEA-GAGTDLIERAEAIAPVDIL 113 (275)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTST-THHHHHHHHHHHHSCCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHhCCCCEE
Confidence 67777777666677778888889888775433222 2333444577777777663221 12222222221 245555
Q ss_pred EecCCCCCccc--CCCHHHHHHHHH
Q 013883 247 LMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 247 ~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+.+.-....+. ..+.++|+++.+
T Consensus 114 vnnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 114 VINASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHH
Confidence 55433222222 357778777654
No 377
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=49.29 E-value=76 Score=27.58 Aligned_cols=94 Identities=15% Similarity=0.069 Sum_probs=51.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcC-CCc---hhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFA-PFY---DSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~-p~y---~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++.. ..- ......+...+.++..+..|- -|.+.++++++.
T Consensus 15 ~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv----~~~~~v~~~~~~~~~~~g 90 (256)
T 3ezl_A 15 IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNV----GDWDSTKQAFDKVKAEVG 90 (256)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCT----TCHHHHHHHHHHHHHHTC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCC----CCHHHHHHHHHHHHHhcC
Confidence 566666666666667777888897777633 222 223334445666666666553 145566555532
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+ ...+.+++++..+
T Consensus 91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 91 EIDVLVNNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp CEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 344554432222222 2356777776654
No 378
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=49.27 E-value=1.1e+02 Score=26.77 Aligned_cols=94 Identities=15% Similarity=0.052 Sum_probs=52.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCC-CchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAP-FYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p-~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+......+...|.+.|..|++..- .-..... .+...|.++..+..|-. |.+.+++++..
T Consensus 23 ~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 23 VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADIS----KPSEVVALFDKAVSHFG 98 (274)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT----SHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCC----CHHHHHHHHHHHHHHcC
Confidence 5777776666666677778888888776543 3222222 23334667776766531 55666665542
Q ss_pred CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+...++.+....+.+. ..+.+++++..+
T Consensus 99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (274)
T 1ja9_A 99 GLDFVMSNSGMEVWCDELEVTQELFDKVFN 128 (274)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHH
Confidence 4455554332222221 346666666554
No 379
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=48.91 E-value=1.3e+02 Score=26.07 Aligned_cols=94 Identities=18% Similarity=0.145 Sum_probs=53.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-...... +...|.++..+..|-. |.+.+++++.. +
T Consensus 16 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 16 VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVG----KAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCC----CHHHHHHHHHHHHHHcCC
Confidence 577777766666677778888898887765443333222 2334666666665531 45666555542 4
Q ss_pred CcEEEecCCCCC-cc--cCCCHHHHHHHHH
Q 013883 243 TRAILMNTPHNP-TG--KMFTREELNVIAS 269 (434)
Q Consensus 243 ~~~i~~~~p~NP-TG--~~~~~e~l~~i~~ 269 (434)
..+++.+.-..+ .+ ...+.++|+++.+
T Consensus 92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 2zat_A 92 VDILVSNAAVNPFFGNIIDATEEVWDKILH 121 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 566665433222 12 2356777766554
No 380
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=48.56 E-value=86 Score=27.22 Aligned_cols=93 Identities=17% Similarity=0.102 Sum_probs=53.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-..........+ +...+..|- -|.+.+++++.. +..+
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv----~~~~~v~~~~~~~~~~~g~id~ 78 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERP-NLFYFHGDV----ADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCT-TEEEEECCT----TSHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-cCCeEEeeC----CCHHHHHHHHHHHHHHcCCCCE
Confidence 57777776666677778888889888887655444444333322 333444442 155666665542 5566
Q ss_pred EEecCCCCCccc--CCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
++.+.-..+.+. ..+.++++++.+
T Consensus 79 lv~nAg~~~~~~~~~~~~~~~~~~~~ 104 (247)
T 3dii_A 79 LVNNACRGSKGILSSLLYEEFDYILS 104 (247)
T ss_dssp EEECCC-CCCCGGGTCCHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 665433222222 456777777665
No 381
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=48.36 E-value=76 Score=28.22 Aligned_cols=94 Identities=16% Similarity=0.182 Sum_probs=54.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCC---EEEEEEcCCCCCCCCHHHHHhhccc----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGA---KIKCITLRPPDFAIPIEELKSTISK---- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~---~~~~v~~~~~~~~~d~~~l~~~i~~---- 241 (434)
.+++|.|+...-..+...|.+.|-+|++.+-.-...... ++..|. ++..+..|-. |.+.++++++.
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 13 TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT----NEDETARAVDAVTAW 88 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTT----SHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCC----CHHHHHHHHHHHHHH
Confidence 577777766666777788888898888876544433333 333444 6666666531 45666655542
Q ss_pred --CCcEEEecCCC-CCcc--cCCCHHHHHHHHH
Q 013883 242 --NTRAILMNTPH-NPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 --~~~~i~~~~p~-NPTG--~~~~~e~l~~i~~ 269 (434)
+...++.+.-. .+.+ ...+.++|+++.+
T Consensus 89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 121 (281)
T 3svt_A 89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVD 121 (281)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHH
Confidence 45556554322 2222 2457777777654
No 382
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=47.39 E-value=1.4e+02 Score=26.25 Aligned_cols=94 Identities=17% Similarity=0.131 Sum_probs=52.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcC-CCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFA-PFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~-p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.++||.|+...-..+...|.+.|-.|++.. ..-..... .....|.++..+..|-. |.+.+++++..
T Consensus 27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVA----DFESCERCAEKVLADFG 102 (269)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCC----CHHHHHHHHHHHHHHcC
Confidence 566666666666667788889998887764 33222222 22334666666666531 45666555532
Q ss_pred CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+...++.+.-....+. ..+.++++++.+
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 132 (269)
T 3gk3_A 103 KVDVLINNAGITRDATFMKMTKGDWDAVMR 132 (269)
T ss_dssp CCSEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCcchhhCCHHHHHHHHH
Confidence 5566665433222222 346777777654
No 383
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=47.08 E-value=63 Score=29.61 Aligned_cols=100 Identities=9% Similarity=0.008 Sum_probs=53.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCC---chhHHHHHHHc-C----CEEEEEEcCCCCCCCCHHHHHhhcccCC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPF---YDSYEATLSMA-G----AKIKCITLRPPDFAIPIEELKSTISKNT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~---y~~~~~~~~~~-G----~~~~~v~~~~~~~~~d~~~l~~~i~~~~ 243 (434)
.|++|.|+......++..|++.|.+|++..-. .......+... + .++..+..|- .|.+.+++++. +.
T Consensus 27 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl----~d~~~~~~~~~-~~ 101 (351)
T 3ruf_A 27 TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI----RDLTTCEQVMK-GV 101 (351)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT----TCHHHHHHHTT-TC
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC----CCHHHHHHHhc-CC
Confidence 68887776666666777788888777764321 22222222221 0 2333343332 26788888886 67
Q ss_pred cEEEecCCCCCccc-CCCHH--------HHHHHHHHHHHcCc
Q 013883 244 RAILMNTPHNPTGK-MFTRE--------ELNVIASLCIENDV 276 (434)
Q Consensus 244 ~~i~~~~p~NPTG~-~~~~e--------~l~~i~~la~~~~~ 276 (434)
.+|+++........ .-..+ -...|++.|++.++
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77776543211111 01111 12357888888764
No 384
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=46.94 E-value=56 Score=30.26 Aligned_cols=103 Identities=13% Similarity=0.121 Sum_probs=53.5
Q ss_pred cEEEcCChHHHHHHHHHHccC--CCCeEEEcCCCchhH----------HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc
Q 013883 172 EVTVTSGCTEAIAATILGLIN--PGDEVILFAPFYDSY----------EATLSMAGAKIKCITLRPPDFAIPIEELKSTI 239 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~--~gd~Vlv~~p~y~~~----------~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i 239 (434)
.|+||.|+......++..|++ .|.+|++.+-.-... .......+..+..+..|- -|.+.++++.
T Consensus 12 ~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl----~d~~~~~~~~ 87 (362)
T 3sxp_A 12 TILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADI----NNPLDLRRLE 87 (362)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCT----TCHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCC----CCHHHHHHhh
Confidence 688877766666677777877 888777653211100 000111222333333331 1567777763
Q ss_pred ccCCcEEEecCCCCCcccCCCHHH--------HHHHHHHHHHcCcEEE
Q 013883 240 SKNTRAILMNTPHNPTGKMFTREE--------LNVIASLCIENDVLVF 279 (434)
Q Consensus 240 ~~~~~~i~~~~p~NPTG~~~~~e~--------l~~i~~la~~~~~~iI 279 (434)
..+..+|+.+....... .-..++ ...+++.|++.++-+|
T Consensus 88 ~~~~D~vih~A~~~~~~-~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V 134 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTT-MLNQELVMKTNYQAFLNLLEIARSKKAKVI 134 (362)
T ss_dssp TSCCSEEEECCCCCGGG-CCCHHHHHHHHTHHHHHHHHHHHHTTCEEE
T ss_pred ccCCCEEEECCccCCcc-ccCHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 44677777654321111 111222 2467788888776543
No 385
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=46.76 E-value=29 Score=34.49 Aligned_cols=108 Identities=8% Similarity=0.087 Sum_probs=59.6
Q ss_pred cCCCCCCCCcEEEcCChHHHHHHHHHHcc----CC--CCe-----EEEcCCCchh-------------------HHHHHH
Q 013883 163 SGLEVDPEKEVTVTSGCTEAIAATILGLI----NP--GDE-----VILFAPFYDS-------------------YEATLS 212 (434)
Q Consensus 163 ~g~~~~~~~~i~~t~G~~~ai~~~~~~l~----~~--gd~-----Vlv~~p~y~~-------------------~~~~~~ 212 (434)
|.+.++++ .|.++.....++...+++|. .. |.. .+...|.|.- +.+.+.
T Consensus 100 Y~L~v~~~-~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma 178 (507)
T 1now_A 100 YTLLVKEP-VAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMA 178 (507)
T ss_dssp EEEEECSS-EEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHH
T ss_pred eEEEEcCC-eEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHH
Confidence 33446666 78887766665555555542 11 111 2334455431 344455
Q ss_pred HcCCEEEEEEcCC-CCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 213 MAGAKIKCITLRP-PDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 213 ~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
.+++++...-+.+ .+|.+..+.+-++-..+ ...| |-.++.+++++|++.|+++++-||-
T Consensus 179 ~~KlN~lh~HltDdq~wr~e~~~~P~Lt~~G--------a~~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 179 FNKFNVLHWHIVDDQSFPYQSITFPELSNKG--------SYSL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp HTTCCEEEEECCCSSCCCBCCSSCHHHHHHH--------SSST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HhCCcEEEEeeccCccceeeccchhhhhccc--------CcCC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6677776665543 23433322221111000 0112 5678999999999999999999884
No 386
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=46.57 E-value=18 Score=32.99 Aligned_cols=75 Identities=13% Similarity=0.199 Sum_probs=47.8
Q ss_pred CCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEc
Q 013883 202 PFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSD 281 (434)
Q Consensus 202 p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~D 281 (434)
|.|..+.++.+....++..+-..+ . .-.+.++++++.+.+.+++-+. |. +.++.++|.+.|+++++.++-.
T Consensus 51 ~vy~sl~el~~~~~~D~viI~tP~-~--~~~~~~~ea~~~Gi~~iVi~t~----G~--~~~~~~~l~~~A~~~gv~liGP 121 (288)
T 2nu8_A 51 PVFNTVREAVAATGATASVIYVPA-P--FCKDSILEAIDAGIKLIITITE----GI--PTLDMLTVKVKLDEAGVRMIGP 121 (288)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCG-G--GHHHHHHHHHHTTCSEEEECCC----CC--CHHHHHHHHHHHHHHTCEEECS
T ss_pred eccCCHHHHhhcCCCCEEEEecCH-H--HHHHHHHHHHHCCCCEEEEECC----CC--CHHHHHHHHHHHHHcCCEEEec
Confidence 445566666653345554443322 1 1367777888888887655222 43 5678889999999999988866
Q ss_pred CcCC
Q 013883 282 EVYD 285 (434)
Q Consensus 282 eay~ 285 (434)
.+..
T Consensus 122 Nc~G 125 (288)
T 2nu8_A 122 NTPG 125 (288)
T ss_dssp SCCE
T ss_pred CCcc
Confidence 6543
No 387
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=46.45 E-value=1.3e+02 Score=26.10 Aligned_cols=97 Identities=12% Similarity=0.078 Sum_probs=52.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM----AGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-......... .+.++..+..+-. .-|.+.+++.+..
T Consensus 14 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~~~g 91 (252)
T 3f1l_A 14 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL--TCTSENCQQLAQRIAVNYP 91 (252)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTT--TCCHHHHHHHHHHHHHHCS
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecc--cCCHHHHHHHHHHHHHhCC
Confidence 567777766666677778888898888876554443333222 2224444444420 1245555554432
Q ss_pred CCcEEEecCCC-CCcc--cCCCHHHHHHHHHH
Q 013883 242 NTRAILMNTPH-NPTG--KMFTREELNVIASL 270 (434)
Q Consensus 242 ~~~~i~~~~p~-NPTG--~~~~~e~l~~i~~l 270 (434)
+..+++.+.-. .+.+ ...+.++|+++.++
T Consensus 92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (252)
T 3f1l_A 92 RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQV 123 (252)
T ss_dssp CCSEEEECCCCCCCCSCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHHhh
Confidence 45666554322 2221 23577788777653
No 388
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=46.44 E-value=14 Score=33.94 Aligned_cols=54 Identities=17% Similarity=0.151 Sum_probs=37.1
Q ss_pred CCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++ .+...|+++ -.+--+..++.+|.+++++.+.+. ++.||.
T Consensus 26 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 86 (301)
T 1xky_A 26 INGNIDFAKTTKLVNYLIDNGTTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVDKRVPVIA 86 (301)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCceEEe
Confidence 467899988888664 367777653 233345578889998888877653 466663
No 389
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=46.09 E-value=28 Score=30.31 Aligned_cols=90 Identities=21% Similarity=0.266 Sum_probs=53.9
Q ss_pred HHHHHHHHHHccCCCCeEEEcCCCchh---HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcc
Q 013883 180 TEAIAATILGLINPGDEVILFAPFYDS---YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTG 256 (434)
Q Consensus 180 ~~ai~~~~~~l~~~gd~Vlv~~p~y~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG 256 (434)
++++..+ ..+...|.++++..|.-.. -..+....|.....+++.. .+++.+.+..+...|++--.+.
T Consensus 43 T~Llr~~-~r~~~~g~kvli~kp~~D~R~~~~~I~Sr~G~~~~a~~v~~------~~di~~~i~~~~dvV~IDEaQF--- 112 (219)
T 3e2i_A 43 EELIRRL-RRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK------ASEIMTHDLTNVDVIGIDEVQF--- 112 (219)
T ss_dssp HHHHHHH-HHHHHTTCCEEEEEEC-----------CBTTBCCEEEEESS------GGGGGGSCCTTCSEEEECCGGG---
T ss_pred HHHHHHH-HHHHHcCCceEEEEeccCCcchhhhHHHhcCCceeeEEeCC------HHHHHHHHhcCCCEEEEechhc---
Confidence 3455554 4455567778888775443 2345556777776666652 3444444555677888866655
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 257 KMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
++.+.++.+.+++ +.|+.||+=.
T Consensus 113 --f~~~~v~~l~~la-~~gi~Vi~~G 135 (219)
T 3e2i_A 113 --FDDEIVSIVEKLS-ADGHRVIVAG 135 (219)
T ss_dssp --SCTHHHHHHHHHH-HTTCEEEEEE
T ss_pred --CCHHHHHHHHHHH-HCCCEEEEee
Confidence 4556778888888 6899999743
No 390
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=45.97 E-value=38 Score=31.10 Aligned_cols=54 Identities=9% Similarity=0.049 Sum_probs=37.4
Q ss_pred CCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++ .+...|+++ -.+--+..++.+|.+++++.+.+. ++.||.
T Consensus 29 ~dg~iD~~~l~~lv~~li~~Gv~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 29 GDGSLDTATAARLANHLVDQGCDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 467889888888664 366777653 234445577888888888877663 567764
No 391
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=45.86 E-value=1.2e+02 Score=27.64 Aligned_cols=94 Identities=14% Similarity=0.132 Sum_probs=53.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCC-----Cchh---HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAP-----FYDS---YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p-----~y~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-- 241 (434)
.++||.|+...-..+...|++.|.+|++..- .-.. ....+...|.++..+..|-. |.+.+++++..
T Consensus 7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvt----d~~~v~~~~~~~~ 82 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQ----SQVSVDRAIDQII 82 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTT----CHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecC----CHHHHHHHHHHHH
Confidence 5677777666667777888899998886321 1111 22233445777777776631 45666665542
Q ss_pred ----CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 ----NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 ----~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+..+++.+.-....|. ..+.++++++.+
T Consensus 83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 116 (324)
T 3u9l_A 83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYD 116 (324)
T ss_dssp HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 4566654433332222 346777765543
No 392
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=45.78 E-value=2e+02 Score=27.10 Aligned_cols=101 Identities=8% Similarity=-0.052 Sum_probs=57.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCC-CeEEEcCCCchhHHHHHHH----c---CCEEEEEEcCCCCCCCCHHHHHhhcc-cC
Q 013883 172 EVTVTSGCTEAIAATILGLINPG-DEVILFAPFYDSYEATLSM----A---GAKIKCITLRPPDFAIPIEELKSTIS-KN 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~----~---G~~~~~v~~~~~~~~~d~~~l~~~i~-~~ 242 (434)
.|++|.|+......+...+++.| ..|++.+-.-......... . +.++..+..|- -|.+.++..+. .+
T Consensus 37 ~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl----~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 37 RFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDI----GSIEYDAFIKADGQ 112 (399)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCT----TSHHHHHHHHHCCC
T ss_pred EEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeC----CCHHHHHHHHHhCC
Confidence 67777776666677778888888 6777766544333333221 1 34566555442 14555655553 36
Q ss_pred CcEEEecCCCCCcccCCCHHH-----------HHHHHHHHHHcCc
Q 013883 243 TRAILMNTPHNPTGKMFTREE-----------LNVIASLCIENDV 276 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~~~~~e~-----------l~~i~~la~~~~~ 276 (434)
...|+++..........++++ -..+++.|+++++
T Consensus 113 ~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv 157 (399)
T 3nzo_A 113 YDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGA 157 (399)
T ss_dssp CSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 778877644221122233322 2357788888874
No 393
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=45.75 E-value=33 Score=31.72 Aligned_cols=96 Identities=9% Similarity=0.029 Sum_probs=56.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEc-CCC--chhHH---HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILF-APF--YDSYE---ATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTR 244 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~-~p~--y~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~ 244 (434)
.|++|.++......++..+++.|..|.+. ... ...-. ..+...|++++...+. |.+.+.++++. +..
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~------d~~~l~~~~~~~~~d 85 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN------EQEAMEKILKEHEID 85 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTT------CHHHHHHHHHHTTCC
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecC------CHHHHHHHHhhCCCC
Confidence 57777765555566677777667555543 322 22221 2234467777655443 67888888864 567
Q ss_pred EEEecCC-CCCcccCCCHHHHHHHHHHHHHcC-cEEEE
Q 013883 245 AILMNTP-HNPTGKMFTREELNVIASLCIEND-VLVFS 280 (434)
Q Consensus 245 ~i~~~~p-~NPTG~~~~~e~l~~i~~la~~~~-~~iI~ 280 (434)
+|+++.. .|..| -+.|++.|++.+ +-.|+
T Consensus 86 ~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 86 IVVSTVGGESILD-------QIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp EEEECCCGGGGGG-------HHHHHHHHHHHCCCSEEE
T ss_pred EEEECCchhhHHH-------HHHHHHHHHHcCCceEEe
Confidence 7776544 34433 357888888887 54443
No 394
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=45.45 E-value=37 Score=29.46 Aligned_cols=89 Identities=19% Similarity=0.269 Sum_probs=46.0
Q ss_pred HHHHHHHHHHccCCCCeEEEcCCCchh---HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcc
Q 013883 180 TEAIAATILGLINPGDEVILFAPFYDS---YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTG 256 (434)
Q Consensus 180 ~~ai~~~~~~l~~~gd~Vlv~~p~y~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG 256 (434)
++++..+. .+...|.+|++..|.-.. ...++...|..+..++... .+++.+.+..+..+|++--.+.
T Consensus 43 T~lL~~a~-r~~~~g~kVli~k~~~d~R~ge~~i~s~~g~~~~a~~~~~------~~~~~~~~~~~~dvViIDEaQF--- 112 (214)
T 2j9r_A 43 EELIRRVR-RTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA------SKDIFKHITEEMDVIAIDEVQF--- 112 (214)
T ss_dssp HHHHHHHH-HHHHTTCCEEEEECC-----------------CCEEECSS------GGGGGGGCCSSCCEEEECCGGG---
T ss_pred HHHHHHHH-HHHHCCCEEEEEEeccCCcchHHHHHhhcCCeeEEeecCC------HHHHHHHHhcCCCEEEEECccc---
Confidence 45555544 445667788887776443 2245555677666666542 2334444444567888866655
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEc
Q 013883 257 KMFTREELNVIASLCIENDVLVFSD 281 (434)
Q Consensus 257 ~~~~~e~l~~i~~la~~~~~~iI~D 281 (434)
++.+.++.|.+++. .++.||+=
T Consensus 113 --~~~~~V~~l~~l~~-~~~~Vi~~ 134 (214)
T 2j9r_A 113 --FDGDIVEVVQVLAN-RGYRVIVA 134 (214)
T ss_dssp --SCTTHHHHHHHHHH-TTCEEEEE
T ss_pred --CCHHHHHHHHHHhh-CCCEEEEE
Confidence 56667766666555 48888873
No 395
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=44.81 E-value=45 Score=28.35 Aligned_cols=95 Identities=12% Similarity=0.044 Sum_probs=51.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTP 251 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p 251 (434)
.|++|.|+...-..++..|++.|.+|.+..-.-.... .....+..+..|- .|.+.++++++ +..+|+.+..
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~Dl----~d~~~~~~~~~-~~d~vi~~a~ 76 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK----IENEHLKVKKADV----SSLDEVCEVCK-GADAVISAFN 76 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC----CCCTTEEEECCCT----TCHHHHHHHHT-TCSEEEECCC
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccch----hccCceEEEEecC----CCHHHHHHHhc-CCCEEEEeCc
Confidence 5888877677777778888888888777554322111 1112333333331 26788888886 4677766532
Q ss_pred CC---CcccCCCHHHHHHHHHHHHHcC
Q 013883 252 HN---PTGKMFTREELNVIASLCIEND 275 (434)
Q Consensus 252 ~N---PTG~~~~~e~l~~i~~la~~~~ 275 (434)
.. +.-......-.+.+++.|++.+
T Consensus 77 ~~~~~~~~~~~n~~~~~~l~~~~~~~~ 103 (227)
T 3dhn_A 77 PGWNNPDIYDETIKVYLTIIDGVKKAG 103 (227)
T ss_dssp C------CCSHHHHHHHHHHHHHHHTT
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhC
Confidence 11 1100001223556667676654
No 396
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=44.76 E-value=1.3e+02 Score=26.96 Aligned_cols=50 Identities=10% Similarity=0.055 Sum_probs=39.7
Q ss_pred CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 227 DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 227 ~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
+|-+|...+.++..-+..+|++... .++.++++++.+.|++.|+-+++|-
T Consensus 127 dfi~d~~qi~ea~~~GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 127 DFLFDPYQVYEARSWGADCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SCCCSTHHHHHHHHTTCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCHHHHHHHHHcCCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 5777877888877778888776433 4577899999999999999988865
No 397
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=44.75 E-value=91 Score=26.79 Aligned_cols=75 Identities=17% Similarity=0.175 Sum_probs=44.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEc-CCCchhH---HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILF-APFYDSY---EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~-~p~y~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|.+|++. ...-... ...+...|.++..+..|-. |.+.+++++..
T Consensus 7 ~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~ 82 (247)
T 2hq1_A 7 TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVK----NPEDVENMVKTAMDAFG 82 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTT----SHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCC----CHHHHHHHHHHHHHhcC
Confidence 57777776666667777788888887765 3322222 2223345667777766531 55666665542
Q ss_pred CCcEEEecC
Q 013883 242 NTRAILMNT 250 (434)
Q Consensus 242 ~~~~i~~~~ 250 (434)
+..+++.+.
T Consensus 83 ~~d~vi~~A 91 (247)
T 2hq1_A 83 RIDILVNNA 91 (247)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 566666543
No 398
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=44.35 E-value=1.3e+02 Score=26.48 Aligned_cols=93 Identities=16% Similarity=0.165 Sum_probs=51.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-........... .+..+..|- -|.+.++++++. +..+
T Consensus 11 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv----~d~~~v~~~~~~~~~~~g~iD~ 85 (270)
T 1yde_A 11 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDV----TQEDDVKTLVSETIRRFGRLDC 85 (270)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCT----TSHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CCeEEEcCC----CCHHHHHHHHHHHHHHcCCCCE
Confidence 57777776666677777888889888876544333333333332 244455442 145666665542 4566
Q ss_pred EEecCCCC-Ccc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHN-PTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~N-PTG--~~~~~e~l~~i~~ 269 (434)
++.+.-.. +.+ ...+.++|+++.+
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (270)
T 1yde_A 86 VVNNAGHHPPPQRPEETSAQGFRQLLE 112 (270)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 66543222 112 1346677776554
No 399
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=43.90 E-value=40 Score=31.95 Aligned_cols=27 Identities=11% Similarity=0.353 Sum_probs=23.7
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcCcCC
Q 013883 259 FTREELNVIASLCIENDVLVFSDEVYD 285 (434)
Q Consensus 259 ~~~e~l~~i~~la~~~~~~iI~Deay~ 285 (434)
++.++.+++.++|+++|+.+.+..-|.
T Consensus 103 l~~~ea~~l~~~A~~~g~~~~v~~~yr 129 (372)
T 4gmf_A 103 LHPDDISSLQTLAQEQGCCYWINTFYP 129 (372)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECSGG
T ss_pred CCHHHHHHHHHHHHHcCCEEEEcCccc
Confidence 367899999999999999999987765
No 400
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=43.81 E-value=83 Score=28.48 Aligned_cols=34 Identities=26% Similarity=0.494 Sum_probs=20.7
Q ss_pred cEEEcCCh---HHHHHHHHHHccCCCCeEEEcCCCch
Q 013883 172 EVTVTSGC---TEAIAATILGLINPGDEVILFAPFYD 205 (434)
Q Consensus 172 ~i~~t~G~---~~ai~~~~~~l~~~gd~Vlv~~p~y~ 205 (434)
.|+++.|+ .+++.++-.+---.-|.|++..|.|.
T Consensus 71 pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 107 (289)
T 2yxg_A 71 QVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYN 107 (289)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred cEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 46666554 56666544332222388998888885
No 401
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=43.69 E-value=46 Score=30.50 Aligned_cols=54 Identities=11% Similarity=0.048 Sum_probs=35.0
Q ss_pred CCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++ .+...|+++ -++-=+..++.+|.+++++.+.+. ++.||.
T Consensus 30 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 30 ESGDIDIAAGREVAAYLVDKGLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 367788888877664 366676653 233334567888888888877653 466663
No 402
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=43.67 E-value=1.4e+02 Score=29.68 Aligned_cols=99 Identities=19% Similarity=0.185 Sum_probs=53.6
Q ss_pred CCCCCcEEEcCChHHHHHHHHHHccCCCCe-EEEc-CCC----------------chhHHHHHHHcCCEEEEEEcCCCCC
Q 013883 167 VDPEKEVTVTSGCTEAIAATILGLINPGDE-VILF-APF----------------YDSYEATLSMAGAKIKCITLRPPDF 228 (434)
Q Consensus 167 ~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~-Vlv~-~p~----------------y~~~~~~~~~~G~~~~~v~~~~~~~ 228 (434)
+.++..++||.|+...-..+...|.+.|.. |++. .-. -......++..|.++..+..|-.
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt-- 325 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT-- 325 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT--
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC--
Confidence 344434555555544445556667777755 5544 221 22233445667889988887642
Q ss_pred CCCHHHHHhhccc-----CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 229 AIPIEELKSTISK-----NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 229 ~~d~~~l~~~i~~-----~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
|.+.+++++.. +...|+++.-....+. ..+.++++++.+
T Consensus 326 --d~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 326 --DAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp --SHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHH
Confidence 56667666643 2344554432222222 457777777665
No 403
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=43.45 E-value=66 Score=27.21 Aligned_cols=91 Identities=8% Similarity=0.112 Sum_probs=51.3
Q ss_pred cEEEcCChHHHHHHHHHHcc-CCCCeEEEcCCCch-hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEec
Q 013883 172 EVTVTSGCTEAIAATILGLI-NPGDEVILFAPFYD-SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMN 249 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~-~~gd~Vlv~~p~y~-~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~ 249 (434)
.|++|.++...-..+...|+ +.|..|++..-.-. .... +...+.++..+..|- -|.+.+++++. +..+|+.+
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~D~----~d~~~~~~~~~-~~d~vv~~ 80 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP-EIIDHERVTVIEGSF----QNPGXLEQAVT-NAEVVFVG 80 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH-HHHTSTTEEEEECCT----TCHHHHHHHHT-TCSEEEES
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh-hccCCCceEEEECCC----CCHHHHHHHHc-CCCEEEEc
Confidence 47777665555666677777 78887776543322 1111 111344555555442 26788888875 56677654
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHHcC
Q 013883 250 TPHNPTGKMFTREELNVIASLCIEND 275 (434)
Q Consensus 250 ~p~NPTG~~~~~e~l~~i~~la~~~~ 275 (434)
.... ..+ .+.+++.+++.+
T Consensus 81 ag~~------n~~-~~~~~~~~~~~~ 99 (221)
T 3r6d_A 81 AMES------GSD-MASIVKALSRXN 99 (221)
T ss_dssp CCCC------HHH-HHHHHHHHHHTT
T ss_pred CCCC------Chh-HHHHHHHHHhcC
Confidence 3311 122 667777777654
No 404
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=43.40 E-value=1.3e+02 Score=25.73 Aligned_cols=94 Identities=15% Similarity=0.088 Sum_probs=51.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCC--CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--------
Q 013883 172 EVTVTSGCTEAIAATILGLINPG--DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-------- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-------- 241 (434)
.+++|.|+......+...|.+.| ..|++..-.-.....+.+..+.++..+..|-. |.+.+++++..
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVT----CDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTT----CHHHHHHHHHHHHHHHGGG
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecC----CHHHHHHHHHHHHHhcCCC
Confidence 57777776666667777888888 77777544332222222212445666665531 45555555532
Q ss_pred CCcEEEecCCCCC-cc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNP-TG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NP-TG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-... .+ ...+.+++++..+
T Consensus 81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (250)
T 1yo6_A 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLD 111 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHH
T ss_pred CCcEEEECCcccCCCcccccCCHHHHHHHHH
Confidence 5666766543222 22 2345666665554
No 405
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=43.30 E-value=73 Score=28.84 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=31.2
Q ss_pred HHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCcCC
Q 013883 232 IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYD 285 (434)
Q Consensus 232 ~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Deay~ 285 (434)
.+.+.++++.+ +.|++.-| . ..+.++.++|.++|+++|+.+.+...+.
T Consensus 80 ~~~~~~al~~g-k~vl~EKP---~--~~~~~~~~~l~~~a~~~g~~~~v~~~~r 127 (308)
T 3uuw_A 80 YEIIKILLNLG-VHVYVDKP---L--ASTVSQGEELIELSTKKNLNLMVGFNRR 127 (308)
T ss_dssp HHHHHHHHHTT-CEEEECSS---S--SSSHHHHHHHHHHHHHHTCCEEECCGGG
T ss_pred HHHHHHHHHCC-CcEEEcCC---C--CCCHHHHHHHHHHHHHcCCEEEEeeccc
Confidence 34444444433 34554444 2 3467899999999999999888866554
No 406
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=43.04 E-value=1.7e+02 Score=25.65 Aligned_cols=93 Identities=16% Similarity=0.028 Sum_probs=50.7
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcC--CEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAG--AKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G--~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.++||.|+...-..+...|.+.|-+|++..-.-...... +...| .++..+..|- -|.+.+++++..
T Consensus 34 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl----~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 34 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL----SNEEDILSMFSAIRSQH 109 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCT----TCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecC----CCHHHHHHHHHHHHHhC
Confidence 577776666666667777888898887765443333222 22333 4566665553 156666665542
Q ss_pred -CCcEEEecCCCCCccc--CCCHHHHHHHH
Q 013883 242 -NTRAILMNTPHNPTGK--MFTREELNVIA 268 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG~--~~~~e~l~~i~ 268 (434)
+..+|+.+....+.+. ..+.++++++.
T Consensus 110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~ 139 (279)
T 1xg5_A 110 SGVDICINNAGLARPDTLLSGSTSGWKDMF 139 (279)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHH
Confidence 5666665433222222 23566655443
No 407
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=43.03 E-value=1.2e+02 Score=26.45 Aligned_cols=64 Identities=16% Similarity=0.150 Sum_probs=38.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTI 239 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i 239 (434)
.+++|.|+...-..+...|.+.|..|++..-.-...... +...|.++..+..|-. |.+.+++++
T Consensus 7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~ 73 (260)
T 2qq5_A 7 VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSS----QESEVRSLF 73 (260)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTT----SHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCC----CHHHHHHHH
Confidence 567776666666677778888898888765443333322 2334667777776532 455555544
No 408
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=43.02 E-value=1.3e+02 Score=26.45 Aligned_cols=78 Identities=10% Similarity=0.018 Sum_probs=42.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCC-CchhHHHHHHH---c-CCEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAP-FYDSYEATLSM---A-GAKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p-~y~~~~~~~~~---~-G~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.+++|.|+...-..+...|.+.|..|++..- .-......... . |.++..+..|-.+..-..+.+++++..
T Consensus 13 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 92 (276)
T 1mxh_A 13 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 92 (276)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhc
Confidence 5777777666666777788888988877654 33333333222 2 666776766532210001555554432
Q ss_pred -CCcEEEec
Q 013883 242 -NTRAILMN 249 (434)
Q Consensus 242 -~~~~i~~~ 249 (434)
+..+++.+
T Consensus 93 g~id~lv~n 101 (276)
T 1mxh_A 93 GRCDVLVNN 101 (276)
T ss_dssp SCCCEEEEC
T ss_pred CCCCEEEEC
Confidence 45666554
No 409
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=42.99 E-value=54 Score=29.67 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=31.7
Q ss_pred HHHHHHHcCCEEEEEEcCCCC-CCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 207 YEATLSMAGAKIKCITLRPPD-FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 207 ~~~~~~~~G~~~~~v~~~~~~-~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
....++.+|++.+.+|+.+.. +.. + +.+.++++++.|.++|+.+|+|-
T Consensus 37 ~~~~lk~~G~N~VRi~~~~~~~w~~----------------------~------~~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 37 AFADIKSHGANTVRVVLSNGVRWSK----------------------N------GPSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp HHHHHHHTTCSEEEEEECCSSSSCC----------------------C------CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCEEEEEccCCcccCC----------------------C------CHHHHHHHHHHHHHCCCEEEEEe
Confidence 445566788888888876421 110 0 24677888888888888888874
No 410
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=42.98 E-value=79 Score=27.97 Aligned_cols=95 Identities=14% Similarity=0.076 Sum_probs=54.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEc-CCCchhH---HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILF-APFYDSY---EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~-~p~y~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++. ...-... ...+...|.++..+..|-. |.+.+++++..
T Consensus 29 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 29 VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS----DPAAVRRLFATAEEAFG 104 (267)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC----CHHHHHHHHHHHHHHcC
Confidence 57777776666677777888889888774 3332222 2334456777777776632 45666655542
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIASL 270 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~l 270 (434)
+..+++.+.-..+.+ ...+.++|+++.+.
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~v 135 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAV 135 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 344444432222222 24577778876653
No 411
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=42.89 E-value=73 Score=29.22 Aligned_cols=88 Identities=17% Similarity=0.214 Sum_probs=46.2
Q ss_pred cEEEcCC---hHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc-----cCC
Q 013883 172 EVTVTSG---CTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS-----KNT 243 (434)
Q Consensus 172 ~i~~t~G---~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-----~~~ 243 (434)
.|+++.| ..+++.++-.+---.-|.|++..|.|... +.++-+++.+.++ .+.
T Consensus 79 pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~--------------------~~~s~~~l~~~f~~va~a~~l 138 (309)
T 3fkr_A 79 PVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGAT--------------------FRVPEAQIFEFYARVSDAIAI 138 (309)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTT--------------------BCCCHHHHHHHHHHHHHHCSS
T ss_pred cEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccC--------------------CCCCHHHHHHHHHHHHHhcCC
Confidence 4666544 55666655443322338899988987210 0011122222111 145
Q ss_pred cEEEecCCCCCcccCCCHHHHHHHHHHHHHc-CcEEEEcCcC
Q 013883 244 RAILMNTPHNPTGKMFTREELNVIASLCIEN-DVLVFSDEVY 284 (434)
Q Consensus 244 ~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~-~~~iI~Deay 284 (434)
.+++++.|. ||+.++.+.+.+| ++++ |+.=|=||+-
T Consensus 139 PiilYn~P~--tg~~l~~~~~~~L---a~~~pnIvgiK~~~~ 175 (309)
T 3fkr_A 139 PIMVQDAPA--SGTALSAPFLARM---AREIEQVAYFXIETP 175 (309)
T ss_dssp CEEEEECGG--GCCCCCHHHHHHH---HHHSTTEEEEEECSS
T ss_pred CEEEEeCCC--CCCCCCHHHHHHH---HhhCCCEEEEECCCc
Confidence 567777773 8888887764444 4443 6655654543
No 412
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=42.83 E-value=90 Score=27.44 Aligned_cols=93 Identities=10% Similarity=0.133 Sum_probs=48.5
Q ss_pred EEEcCChHHHHHHHHHHccCC--CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecC
Q 013883 173 VTVTSGCTEAIAATILGLINP--GDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNT 250 (434)
Q Consensus 173 i~~t~G~~~ai~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~ 250 (434)
|++|.|+......++..|++. |.+|.+..-.-.... .+...+.+++...+. |.+.++++++ +..+|+++.
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~------d~~~~~~~~~-~~d~vi~~a 73 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ-ALAAQGITVRQADYG------DEAALTSALQ-GVEKLLLIS 73 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH-HHHHTTCEEEECCTT------CHHHHHHHTT-TCSEEEECC
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh-hhhcCCCeEEEcCCC------CHHHHHHHHh-CCCEEEEeC
Confidence 566665555555666777776 766665432111111 122345555443332 6788888876 466777654
Q ss_pred CCCCcccCCCHHHHHHHHHHHHHcCc
Q 013883 251 PHNPTGKMFTREELNVIASLCIENDV 276 (434)
Q Consensus 251 p~NPTG~~~~~e~l~~i~~la~~~~~ 276 (434)
..++.. ..+..+.+++.|++.++
T Consensus 74 ~~~~~~---~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 74 SSEVGQ---RAPQHRNVINAAKAAGV 96 (286)
T ss_dssp -----------CHHHHHHHHHHHHTC
T ss_pred CCCchH---HHHHHHHHHHHHHHcCC
Confidence 332211 12246678888887764
No 413
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=42.73 E-value=65 Score=27.94 Aligned_cols=92 Identities=10% Similarity=0.036 Sum_probs=48.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--CCcEEEec
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK--NTRAILMN 249 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~~~i~~~ 249 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-....... ..+ ++..+..|- -|.+.+++..+. +..+++.+
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~D~----~~~~~~~~~~~~~~~id~lv~~ 81 (246)
T 2ag5_A 8 VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYP-GIQTRVLDV----TKKKQIDQFANEVERLDVLFNV 81 (246)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GST-TEEEEECCT----TCHHHHHHHHHHCSCCSEEEEC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hcc-CceEEEeeC----CCHHHHHHHHHHhCCCCEEEEC
Confidence 5777766666666677778888988887654322221111 111 344454442 145666655433 45666654
Q ss_pred CCCCCcc--cCCCHHHHHHHHH
Q 013883 250 TPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 250 ~p~NPTG--~~~~~e~l~~i~~ 269 (434)
.-....+ ...+.++|+++.+
T Consensus 82 Ag~~~~~~~~~~~~~~~~~~~~ 103 (246)
T 2ag5_A 82 AGFVHHGTVLDCEEKDWDFSMN 103 (246)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 3322222 2346777776554
No 414
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=42.65 E-value=88 Score=27.91 Aligned_cols=95 Identities=18% Similarity=0.162 Sum_probs=52.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHH----cCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM----AGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|-+|++.+-.-......... .+..+..+..|-. |.+.++++++.
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 35 IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVG----DPDQVAALFAAVRAEFA 110 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCC----CHHHHHHHHHHHHHHcC
Confidence 566666666656666777888898888876554443333222 2323355555421 45555555432
Q ss_pred CCcEEEecCCCC-Ccc--cCCCHHHHHHHHHH
Q 013883 242 NTRAILMNTPHN-PTG--KMFTREELNVIASL 270 (434)
Q Consensus 242 ~~~~i~~~~p~N-PTG--~~~~~e~l~~i~~l 270 (434)
+..+++.+.-.. +.+ ...+.++|+++.++
T Consensus 111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~v 142 (281)
T 4dry_A 111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAA 142 (281)
T ss_dssp CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHH
Confidence 455665543222 211 23577888877653
No 415
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=42.58 E-value=76 Score=28.99 Aligned_cols=90 Identities=17% Similarity=0.042 Sum_probs=50.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTP 251 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p 251 (434)
.|+||.|+......++..|++.|..|++.+-.-.. .+..++...+ .|.+.+++++. +..+|+++..
T Consensus 21 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl------~d~~~~~~~~~-~~d~vih~A~ 86 (347)
T 4id9_A 21 MILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSL------EDGQALSDAIM-GVSAVLHLGA 86 (347)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCT------TCHHHHHHHHT-TCSEEEECCC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCc------CCHHHHHHHHh-CCCEEEECCc
Confidence 68888776666666777788888776654322111 3334333222 26788888776 6677776543
Q ss_pred -CCCcccCCCH-------HHHHHHHHHHHHcCc
Q 013883 252 -HNPTGKMFTR-------EELNVIASLCIENDV 276 (434)
Q Consensus 252 -~NPTG~~~~~-------e~l~~i~~la~~~~~ 276 (434)
..+..... . .-...+++.|+++++
T Consensus 87 ~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~~ 118 (347)
T 4id9_A 87 FMSWAPADR-DRMFAVNVEGTRRLLDAASAAGV 118 (347)
T ss_dssp CCCSSGGGH-HHHHHHHTHHHHHHHHHHHHTTC
T ss_pred ccCcchhhH-HHHHHHHHHHHHHHHHHHHHcCC
Confidence 22221110 1 113567888888775
No 416
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=41.94 E-value=1.4e+02 Score=26.01 Aligned_cols=95 Identities=14% Similarity=0.039 Sum_probs=51.6
Q ss_pred cEEEcCChHHHHHHHHHHccC---CCCeEEEcCCCchhHHHHHHHc-----CCEEEEEEcCCCCCCCCHHHHHhhccc--
Q 013883 172 EVTVTSGCTEAIAATILGLIN---PGDEVILFAPFYDSYEATLSMA-----GAKIKCITLRPPDFAIPIEELKSTISK-- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~---~gd~Vlv~~p~y~~~~~~~~~~-----G~~~~~v~~~~~~~~~d~~~l~~~i~~-- 241 (434)
.+++|.|+...-..+...|.+ .|..|++.+-.-.......... |.++..+..|-. |.+.+++++..
T Consensus 8 ~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~ 83 (259)
T 1oaa_A 8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG----TEAGVQRLLSAVR 83 (259)
T ss_dssp EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTT----SHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCC----CHHHHHHHHHHHH
Confidence 566666666666666777777 7888887655443333333222 667777776632 45555544421
Q ss_pred ------CCc-EEEecCCC--CCc-cc--C-CCHHHHHHHHHH
Q 013883 242 ------NTR-AILMNTPH--NPT-GK--M-FTREELNVIASL 270 (434)
Q Consensus 242 ------~~~-~i~~~~p~--NPT-G~--~-~~~e~l~~i~~l 270 (434)
+.. -+++++.- .+. +. . .+.++|+++.++
T Consensus 84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~ 125 (259)
T 1oaa_A 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHH
T ss_pred hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHH
Confidence 223 14444442 121 11 1 567788877653
No 417
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=41.89 E-value=66 Score=32.42 Aligned_cols=25 Identities=20% Similarity=0.429 Sum_probs=22.3
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 256 GKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 256 G~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
|..++++++++|++.|+++++-||-
T Consensus 250 ~~~YT~~di~eiv~yA~~rgI~VIP 274 (572)
T 3ozo_A 250 QKVYTKAAIREVVRFGLERGVRVLP 274 (572)
T ss_dssp SSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcCHHHHHHHHHHHHHhCCceee
Confidence 4578999999999999999998883
No 418
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=41.81 E-value=95 Score=28.30 Aligned_cols=34 Identities=29% Similarity=0.396 Sum_probs=20.9
Q ss_pred cEEEcCCh---HHHHHHHHHHccCCCCeEEEcCCCch
Q 013883 172 EVTVTSGC---TEAIAATILGLINPGDEVILFAPFYD 205 (434)
Q Consensus 172 ~i~~t~G~---~~ai~~~~~~l~~~gd~Vlv~~p~y~ 205 (434)
.|+++.|+ .+++.++-.+---.-|.|++..|.|.
T Consensus 83 pViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 119 (301)
T 1xky_A 83 PVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYN 119 (301)
T ss_dssp CEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred eEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 46666554 56666554433222388999889885
No 419
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=41.81 E-value=1.7e+02 Score=25.10 Aligned_cols=97 Identities=16% Similarity=0.210 Sum_probs=53.0
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcC-CEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAG-AKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G-~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|.+|++..-.-...... +...+ .++..+..+-+ .-|.+.+++.+..
T Consensus 16 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d--~~~~~~~~~~~~~~~~~~g 93 (247)
T 3i1j_A 16 VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLE--NATAQQYRELAARVEHEFG 93 (247)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTT--TCCHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccc--cCCHHHHHHHHHHHHHhCC
Confidence 577777766666777788888898888876554443333 22333 33344444321 1245555554432
Q ss_pred CCcEEEecCCC-CCcc--cCCCHHHHHHHHHH
Q 013883 242 NTRAILMNTPH-NPTG--KMFTREELNVIASL 270 (434)
Q Consensus 242 ~~~~i~~~~p~-NPTG--~~~~~e~l~~i~~l 270 (434)
+...++.+.-. .+.+ ...+.+++++..+.
T Consensus 94 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 125 (247)
T 3i1j_A 94 RLDGLLHNASIIGPRTPLEQLPDEDFMQVMHV 125 (247)
T ss_dssp CCSEEEECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHHHH
Confidence 45666654332 2222 23477788776653
No 420
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=41.72 E-value=1e+02 Score=27.92 Aligned_cols=34 Identities=29% Similarity=0.462 Sum_probs=20.8
Q ss_pred cEEEcCCh---HHHHHHHHHHccCCCCeEEEcCCCch
Q 013883 172 EVTVTSGC---TEAIAATILGLINPGDEVILFAPFYD 205 (434)
Q Consensus 172 ~i~~t~G~---~~ai~~~~~~l~~~gd~Vlv~~p~y~ 205 (434)
.|+++.|+ .+++.++-.+--..-|.|++..|.|.
T Consensus 71 pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 107 (292)
T 2vc6_A 71 PVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYN 107 (292)
T ss_dssp CBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred cEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 46665554 56666554433223388999989885
No 421
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=41.66 E-value=1e+02 Score=27.96 Aligned_cols=73 Identities=22% Similarity=0.318 Sum_probs=40.2
Q ss_pred cEEEcCCh---HHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-----CC
Q 013883 172 EVTVTSGC---TEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-----NT 243 (434)
Q Consensus 172 ~i~~t~G~---~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-----~~ 243 (434)
.|+++.|+ .+++.++-.+---.-|.|++..|.|... +-+++.+.++. +.
T Consensus 72 pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-----------------------s~~~l~~~f~~ia~a~~l 128 (291)
T 3a5f_A 72 PVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKT-----------------------TQKGLVKHFKAVSDAVST 128 (291)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-----------------------CHHHHHHHC-CTGGGCCS
T ss_pred cEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-----------------------CHHHHHHHHHHHHHhcCC
Confidence 46666554 5666654433322238899888888521 12333332221 34
Q ss_pred cEEEecCCCCCcccCCCHHHHHHHH
Q 013883 244 RAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 244 ~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
.+++++.|.. ||+.++.+.+.+|+
T Consensus 129 PiilYn~P~~-tg~~l~~~~~~~La 152 (291)
T 3a5f_A 129 PIIIYNVPGR-TGLNITPGTLKELC 152 (291)
T ss_dssp CEEEEECHHH-HSCCCCHHHHHHHT
T ss_pred CEEEEeCccc-cCCCCCHHHHHHHH
Confidence 5666666643 78878777755554
No 422
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=41.56 E-value=1.8e+02 Score=25.44 Aligned_cols=94 Identities=16% Similarity=0.063 Sum_probs=54.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEc-CCCchhH---HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILF-APFYDSY---EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~-~p~y~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.++||.|+...-..+...|.+.|..|++. ...-... ...+...+.++..+..|-. |.+.++++++.
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVG----NAADIAAMFSAVDRQFG 103 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCC----CHHHHHHHHHHHHHhCC
Confidence 56666666666666777888889888664 3333322 2334456778888776632 45556555532
Q ss_pred CCcEEEecCCCCCc-c--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPT-G--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPT-G--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-.... + ...+.+++++..+
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLR 134 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHh
Confidence 45666654322211 1 1347777777665
No 423
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=41.55 E-value=1e+02 Score=27.95 Aligned_cols=72 Identities=26% Similarity=0.371 Sum_probs=41.1
Q ss_pred cEEEcCCh---HHHHHHHHHHccCCC-CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc----cc-C
Q 013883 172 EVTVTSGC---TEAIAATILGLINPG-DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI----SK-N 242 (434)
Q Consensus 172 ~i~~t~G~---~~ai~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i----~~-~ 242 (434)
.|+++.|+ .+++.++-. ..+-| |.|++..|.|... +-+++.+.+ .. +
T Consensus 72 pviaGvg~~~t~~ai~la~~-a~~~Gadavlv~~P~y~~~-----------------------s~~~l~~~f~~ia~a~~ 127 (292)
T 2ojp_A 72 PVIAGTGANATAEAISLTQR-FNDSGIVGCLTVTPYYNRP-----------------------SQEGLYQHFKAIAEHTD 127 (292)
T ss_dssp CEEEECCCSSHHHHHHHHHH-TTTSSCSEEEEECCCSSCC-----------------------CHHHHHHHHHHHHTTCS
T ss_pred cEEEecCCccHHHHHHHHHH-HHhcCCCEEEECCCCCCCC-----------------------CHHHHHHHHHHHHHhcC
Confidence 46666554 556664433 34445 8899999988521 112222211 11 3
Q ss_pred CcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 243 TRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 243 ~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
..+++++.|. .||+.++.+.+.+|+
T Consensus 128 lPiilYn~P~-~tg~~l~~~~~~~La 152 (292)
T 2ojp_A 128 LPQILYNVPS-RTGCDLLPETVGRLA 152 (292)
T ss_dssp SCEEEECCHH-HHSCCCCHHHHHHHH
T ss_pred CCEEEEeCcc-hhccCCCHHHHHHHH
Confidence 4566776664 478888888766664
No 424
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=41.44 E-value=1.2e+02 Score=26.37 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=49.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhH----HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY----EATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++..-.-... ..+....+.++..+..|-. |.+.+++++..
T Consensus 16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~----~~~~~~~~~~~~~~~~~ 91 (265)
T 1h5q_A 16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVS----NTDIVTKTIQQIDADLG 91 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTT----CHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCC----CHHHHHHHHHHHHHhcC
Confidence 577776666666667777888887777654321111 1222234666766666531 45666655532
Q ss_pred CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+ ...+.+++++..+
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 1h5q_A 92 PISGLIANAGVSVVKPATELTHEDFAFVYD 121 (265)
T ss_dssp SEEEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHh
Confidence 244444432222222 1346666665544
No 425
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=41.43 E-value=40 Score=30.78 Aligned_cols=54 Identities=20% Similarity=0.260 Sum_probs=36.3
Q ss_pred CCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++ .+...|+++ -.+--+..++.+|.+++++.+.+. ++.||.
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 21 QDGSIHYEQLRDLIDWHIENGTDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 367788888887664 366777653 234445577888888888877653 466664
No 426
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=40.84 E-value=34 Score=30.08 Aligned_cols=92 Identities=15% Similarity=0.189 Sum_probs=51.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-----CCcEE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-----NTRAI 246 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-----~~~~i 246 (434)
.+++|.|+...-..+...|.+.|..|++.+-. ........+.++..+..|-. |.+.+++++.. +..++
T Consensus 11 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~D~~----~~~~v~~~~~~~~~~g~id~l 83 (257)
T 3tl3_A 11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDRARFAAADVT----DEAAVASALDLAETMGTLRIV 83 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEESS---CHHHHHHTCTTEEEEECCTT----CHHHHHHHHHHHHHHSCEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc---hHHHHHhcCCceEEEECCCC----CHHHHHHHHHHHHHhCCCCEE
Confidence 56666666666666777788888887776442 23344556777777776632 45555554432 33444
Q ss_pred EecCCCCCccc------CCCHHHHHHHHHH
Q 013883 247 LMNTPHNPTGK------MFTREELNVIASL 270 (434)
Q Consensus 247 ~~~~p~NPTG~------~~~~e~l~~i~~l 270 (434)
+.+.-....+. ..+.++|+++.+.
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 113 (257)
T 3tl3_A 84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113 (257)
T ss_dssp EECGGGSHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred EECCCCCCCcccccccccCCHHHHHHHHHH
Confidence 43321111111 2577788777653
No 427
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=40.79 E-value=1.8e+02 Score=25.30 Aligned_cols=94 Identities=10% Similarity=0.107 Sum_probs=53.9
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEE-cCCCchhHH---HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVIL-FAPFYDSYE---ATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv-~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.++||.|+...-..+...|.+.|..|++ ....-.... ..+...+.++..+..|-. |.+.+++.+..
T Consensus 28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~----~~~~~~~~~~~~~~~~g 103 (267)
T 4iiu_A 28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVA----NREQCREVLEHEIAQHG 103 (267)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHHC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCC----CHHHHHHHHHHHHHHhC
Confidence 5777777666667777888888988855 333322222 223445667777766531 45666655542
Q ss_pred CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+...++.+.-....+. ..+.+++++..+
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 133 (267)
T 4iiu_A 104 AWYGVVSNAGIARDAAFPALSNDDWDAVIH 133 (267)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CccEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 4556655432222222 357777777665
No 428
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=40.78 E-value=18 Score=35.26 Aligned_cols=29 Identities=17% Similarity=0.445 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHMC 103 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCC
Confidence 68899999999999999999999988764
No 429
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=40.74 E-value=1.6e+02 Score=25.41 Aligned_cols=94 Identities=9% Similarity=0.061 Sum_probs=49.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHc---C-------CEEEEEEcCCCCCCCCHHHHHhhccc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA---G-------AKIKCITLRPPDFAIPIEELKSTISK 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~---G-------~~~~~v~~~~~~~~~d~~~l~~~i~~ 241 (434)
.+++|.|+...-..+...|.+.|.+|++..-.-.......... | .++..+..|- -|.+.++++++.
T Consensus 9 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~----~~~~~~~~~~~~ 84 (264)
T 2pd6_A 9 LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADV----SEARAARCLLEQ 84 (264)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCT----TSHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecC----CCHHHHHHHHHH
Confidence 5777766666666677778888888887654433333333322 2 2344444442 145666555533
Q ss_pred ------CC-cEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 242 ------NT-RAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ------~~-~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
+. .+++.+.-..+.+ ...+.+++++..+
T Consensus 85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (264)
T 2pd6_A 85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIA 121 (264)
T ss_dssp HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHh
Confidence 23 5666543322222 1346666666554
No 430
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=40.74 E-value=97 Score=28.27 Aligned_cols=94 Identities=17% Similarity=0.160 Sum_probs=51.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCC--EEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGA--KIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.++||.|+...-..+...|++.|..|++..-.-...... +...|. ++..+..|-. |.+.+++++..
T Consensus 10 ~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~----~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 10 TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVA----SREGFKMAADEVEARF 85 (319)
T ss_dssp EEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTT----CHHHHHHHHHHHHHHT
T ss_pred EEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCC----CHHHHHHHHHHHHHhC
Confidence 567776666666667777888898888766554443333 233343 6666666531 45666555532
Q ss_pred -CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 -NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 -~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+. ..+.++++++.+
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 116 (319)
T 3ioy_A 86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLG 116 (319)
T ss_dssp CCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3344444322222221 346666666544
No 431
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=40.74 E-value=75 Score=28.07 Aligned_cols=74 Identities=16% Similarity=0.100 Sum_probs=42.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCch---hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------C
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYD---SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------N 242 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~---~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~ 242 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-. .....+...|.++..+..|-. |.+.+++++.. +
T Consensus 36 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~----~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 36 VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNIS----DPKSVEETISQQEKDFGT 111 (279)
T ss_dssp EEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecC----CHHHHHHHHHHHHHHhCC
Confidence 6777766655556667777777877776532222 222333444666766665531 45666665543 4
Q ss_pred CcEEEec
Q 013883 243 TRAILMN 249 (434)
Q Consensus 243 ~~~i~~~ 249 (434)
..+++.+
T Consensus 112 id~li~~ 118 (279)
T 3ctm_A 112 IDVFVAN 118 (279)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 6666654
No 432
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=40.47 E-value=99 Score=28.24 Aligned_cols=34 Identities=18% Similarity=0.347 Sum_probs=20.8
Q ss_pred cEEEcCCh---HHHHHHHHHHccCCCCeEEEcCCCch
Q 013883 172 EVTVTSGC---TEAIAATILGLINPGDEVILFAPFYD 205 (434)
Q Consensus 172 ~i~~t~G~---~~ai~~~~~~l~~~gd~Vlv~~p~y~ 205 (434)
.|+++.|+ .+++.++-.+---.-|.|++..|.|.
T Consensus 83 pViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~ 119 (306)
T 1o5k_A 83 PVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYN 119 (306)
T ss_dssp CEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred eEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 46666554 56666554333222388999888884
No 433
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=40.25 E-value=1.9e+02 Score=25.43 Aligned_cols=94 Identities=16% Similarity=0.148 Sum_probs=53.1
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchh----HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS----YEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|-.|++..-.-.. ....+...|.++..+..|-. |.+.+++++..
T Consensus 31 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 31 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG----VVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCC----CHHHHHHHHHHHHHHcC
Confidence 57777666666667777788889887775433221 12223445777777766531 45555554432
Q ss_pred CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+..+++.+.-....+. ..+.++++++.+
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 136 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFT 136 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 4566655432222221 346777777665
No 434
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=39.91 E-value=1.2e+02 Score=25.59 Aligned_cols=31 Identities=10% Similarity=0.025 Sum_probs=13.6
Q ss_pred CCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcC
Q 013883 192 NPGDEVILFAPFYDSYEATLSMAGAKIKCITLR 224 (434)
Q Consensus 192 ~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~ 224 (434)
+.|..|++....-..+.. +..+.+|+.++..
T Consensus 49 ~~~~dVIISRGgta~~lr--~~~~iPVV~I~~s 79 (196)
T 2q5c_A 49 QDEVDAIISRGATSDYIK--KSVSIPSISIKVT 79 (196)
T ss_dssp TTTCSEEEEEHHHHHHHH--TTCSSCEEEECCC
T ss_pred cCCCeEEEECChHHHHHH--HhCCCCEEEEcCC
Confidence 445445554433222221 2245566655544
No 435
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=39.70 E-value=1.3e+02 Score=26.20 Aligned_cols=94 Identities=11% Similarity=0.003 Sum_probs=53.5
Q ss_pred cEEEcCChHHHHHHHHHHccCC--CCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CC
Q 013883 172 EVTVTSGCTEAIAATILGLINP--GDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~ 243 (434)
.+++|.|+...-..+...|.+. |-.|++..-.-.......+..|.++..+..|-. |.+.+++++.. +.
T Consensus 4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~~~g~i 79 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDIT----EDSVLKQLVNAAVKGHGKI 79 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTT----SHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCC----CHHHHHHHHHHHHHhcCCc
Confidence 4566666555555566666655 456766555555555555666777777776532 45666655542 45
Q ss_pred cEEEecCCC-CCccc--CCCHHHHHHHHH
Q 013883 244 RAILMNTPH-NPTGK--MFTREELNVIAS 269 (434)
Q Consensus 244 ~~i~~~~p~-NPTG~--~~~~e~l~~i~~ 269 (434)
..++.+.-. .+.+. ..+.++|+++.+
T Consensus 80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 3kzv_A 80 DSLVANAGVLEPVQNVNEIDVNAWKKLYD 108 (254)
T ss_dssp CEEEEECCCCCCCTTTTSCCHHHHHHHHH
T ss_pred cEEEECCcccCCCCCcccCCHHHHHHHHH
Confidence 566554322 22222 457778777654
No 436
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=39.47 E-value=1.9e+02 Score=25.10 Aligned_cols=9 Identities=33% Similarity=0.578 Sum_probs=5.1
Q ss_pred CChhhcccc
Q 013883 312 LGKTFSLTG 320 (434)
Q Consensus 312 ~SK~~g~~G 320 (434)
+.|-+|+++
T Consensus 167 ~A~~~Gl~~ 175 (225)
T 2pju_A 167 LAEEAGMTG 175 (225)
T ss_dssp HHHHTTSEE
T ss_pred HHHHcCCcE
Confidence 445566664
No 437
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=39.47 E-value=22 Score=34.68 Aligned_cols=29 Identities=17% Similarity=0.402 Sum_probs=25.4
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 252 HNPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 252 ~NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+++.|-.++++++++|++.|++++|-||=
T Consensus 85 ~~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 85 DDPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 34667789999999999999999999884
No 438
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=39.43 E-value=1.4e+02 Score=25.90 Aligned_cols=74 Identities=18% Similarity=0.122 Sum_probs=41.8
Q ss_pred cEEEcCChHHHHHHHHHHccC-CCCeEEEcCCCchhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLIN-PGDEVILFAPFYDSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~-~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.++||.|+......+...|.+ .|..|++..-.-...... +...|.++..+..|-. |.+.+++++..
T Consensus 6 ~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~----~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID----DLQSIRALRDFLRKEYG 81 (276)
T ss_dssp EEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCC----CHHHHHHHHHHHHHhcC
Confidence 577776666666667777777 788877765443333222 2333555555555421 45666655542
Q ss_pred CCcEEEec
Q 013883 242 NTRAILMN 249 (434)
Q Consensus 242 ~~~~i~~~ 249 (434)
+..+|+.+
T Consensus 82 ~id~li~~ 89 (276)
T 1wma_A 82 GLDVLVNN 89 (276)
T ss_dssp SEEEEEEC
T ss_pred CCCEEEEC
Confidence 44555544
No 439
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=39.23 E-value=46 Score=30.54 Aligned_cols=54 Identities=13% Similarity=0.134 Sum_probs=36.1
Q ss_pred CCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++ .+...|+++. ++--+..++.+|.+++++.+.+. ++.||.
T Consensus 28 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 28 ATAEVDYGKLEENLHKLGTFPFRGFVVQG-SNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp TTSCBCHHHHHHHHHHHTTSCCSEEEESS-GGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECc-cccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 367788888887664 3667776532 22223567888888888888774 566664
No 440
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=39.18 E-value=55 Score=30.43 Aligned_cols=54 Identities=13% Similarity=0.054 Sum_probs=34.4
Q ss_pred CCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++ .+...|+++ -.+-=+..++.+|.+++++.+.+. ++.||.
T Consensus 48 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 48 EAGRVDIEAFSALIARLDAAEVDSVGIL-GSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp TTCCBCHHHHHHHHHHHHHHTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 356788888777654 366676653 223334467888888888777653 466663
No 441
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=39.13 E-value=46 Score=30.26 Aligned_cols=54 Identities=13% Similarity=0.140 Sum_probs=35.3
Q ss_pred CCCCCCHHHHHhhccc----CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTISK----NTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~~----~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++. +...++++. .+--+..++.+|.+++++.+.+. ++.||.
T Consensus 15 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 15 KDGGVDWKSLEKLVEWHIEQGTNSIVAVG-TTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCEEEECc-cccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3677888888876643 667776532 33334577888888888877653 456664
No 442
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=39.05 E-value=80 Score=29.31 Aligned_cols=88 Identities=16% Similarity=0.155 Sum_probs=47.3
Q ss_pred cEEEcCC---hHHHHHHHHHHccCCCCeEEEcCCCchhHH--HHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEE
Q 013883 172 EVTVTSG---CTEAIAATILGLINPGDEVILFAPFYDSYE--ATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAI 246 (434)
Q Consensus 172 ~i~~t~G---~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i 246 (434)
.|+++.| ..+++.++-.+---.-|.|++..|.|.... .+.+. +..+.++. +..++
T Consensus 105 pViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~------------------f~~VA~a~--~lPii 164 (332)
T 2r8w_A 105 TLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHH------------------FAAVAGAT--ALPLA 164 (332)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHH------------------HHHHHHHC--SSCEE
T ss_pred cEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHH------------------HHHHHHhc--CCCEE
Confidence 4666554 356776554333222388999999885210 00000 11222221 34567
Q ss_pred EecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcCc
Q 013883 247 LMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEV 283 (434)
Q Consensus 247 ~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~Dea 283 (434)
+++.|.. ||+.++.+.+.+|++ -.|+.=|=|..
T Consensus 165 lYn~P~~-tg~~l~~e~~~~La~---~pnIvgiKdss 197 (332)
T 2r8w_A 165 IYNNPTT-TRFTFSDELLVRLAY---IPNIRAIKMPL 197 (332)
T ss_dssp EECCHHH-HCCCCCHHHHHHHHT---STTEEEEEECC
T ss_pred EEeCccc-cCcCCCHHHHHHHHc---CCCEEEEEeCC
Confidence 7766653 898888888666653 23555555554
No 443
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=38.84 E-value=96 Score=25.68 Aligned_cols=90 Identities=11% Similarity=0.049 Sum_probs=46.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--CCcEEEec
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK--NTRAILMN 249 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~~~i~~~ 249 (434)
.+++|.|+...-..+...+.+. .|++..-.-..........+. ..+..|- -|.+.+++++.. +..+++.+
T Consensus 2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~--~~~~~D~----~~~~~~~~~~~~~~~id~vi~~ 73 (207)
T 2yut_A 2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA--RALPADL----ADELEAKALLEEAGPLDLLVHA 73 (207)
T ss_dssp EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC--EECCCCT----TSHHHHHHHHHHHCSEEEEEEC
T ss_pred EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC--cEEEeeC----CCHHHHHHHHHhcCCCCEEEEC
Confidence 3666666555556666777766 666655544444444444443 3333331 257778777764 56666655
Q ss_pred CCCCCccc--CCCHHHHHHHHH
Q 013883 250 TPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 250 ~p~NPTG~--~~~~e~l~~i~~ 269 (434)
....+.+. ..+.+++++..+
T Consensus 74 ag~~~~~~~~~~~~~~~~~~~~ 95 (207)
T 2yut_A 74 VGKAGRASVREAGRDLVEEMLA 95 (207)
T ss_dssp CCCCCCBCSCC---CHHHHHHH
T ss_pred CCcCCCCChhhCCHHHHHHHHH
Confidence 43333222 224455655554
No 444
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=38.62 E-value=61 Score=32.84 Aligned_cols=29 Identities=10% Similarity=0.220 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 197 t~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 225 (601)
T 3edf_A 197 SNEDFVRLSTEARKRGMGLIQDVVLSHIG 225 (601)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECCcccC
Confidence 67899999999999999999999987654
No 445
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=38.58 E-value=95 Score=27.32 Aligned_cols=86 Identities=20% Similarity=0.183 Sum_probs=48.5
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-.. +.++..+..|- -|.+.+++++.. +..+
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~Dl----~~~~~v~~~~~~~~~~~g~iD~ 77 (264)
T 2dtx_A 10 VVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------EAKYDHIECDV----TNPDQVKASIDHIFKEYGSISV 77 (264)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------SCSSEEEECCT----TCHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------CCceEEEEecC----CCHHHHHHHHHHHHHHcCCCCE
Confidence 57777776666677777888888887764322111 33444444442 145666665542 4566
Q ss_pred EEecCCCCCccc--CCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
++.+.-....+. ..+.++|+++.+
T Consensus 78 lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (264)
T 2dtx_A 78 LVNNAGIESYGKIESMSMGEWRRIID 103 (264)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 665433332232 346777777665
No 446
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=38.16 E-value=96 Score=28.29 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=20.8
Q ss_pred cEEEcCCh---HHHHHHHHHHccCCCCeEEEcCCCch
Q 013883 172 EVTVTSGC---TEAIAATILGLINPGDEVILFAPFYD 205 (434)
Q Consensus 172 ~i~~t~G~---~~ai~~~~~~l~~~gd~Vlv~~p~y~ 205 (434)
.|+++.|+ .+++.++-.+---.-|.|++..|.|.
T Consensus 82 pViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 118 (303)
T 2wkj_A 82 KLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYY 118 (303)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred cEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCC
Confidence 46666554 56666544332222388999889885
No 447
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=38.13 E-value=88 Score=28.47 Aligned_cols=87 Identities=18% Similarity=0.233 Sum_probs=46.5
Q ss_pred cEEEcCCh---HHHHHHHHHHccCCCCeEEEcCCCchhH--HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEE
Q 013883 172 EVTVTSGC---TEAIAATILGLINPGDEVILFAPFYDSY--EATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAI 246 (434)
Q Consensus 172 ~i~~t~G~---~~ai~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i 246 (434)
.|+++.|+ .+++.++-.+--..-|.|++..|.|... ..+.+. +..+.++. +..++
T Consensus 71 pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~------------------f~~va~a~--~lPii 130 (297)
T 2rfg_A 71 PVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQH------------------FKMVHDAI--DIPII 130 (297)
T ss_dssp CBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHH------------------HHHHHHHC--SSCEE
T ss_pred eEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHH------------------HHHHHHhc--CCCEE
Confidence 46665554 5666655433322238899999988521 111100 12222221 35567
Q ss_pred EecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 247 LMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 247 ~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
+++.|.. ||+.++.+.+.+|++ -.|+.=|=|.
T Consensus 131 lYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKds 162 (297)
T 2rfg_A 131 VYNIPPR-AVVDIKPETMARLAA---LPRIVGVKDA 162 (297)
T ss_dssp EEECHHH-HSCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred EEeCccc-cCCCCCHHHHHHHHc---CCCEEEEEeC
Confidence 7776753 888888888666643 2355445444
No 448
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=37.94 E-value=1.9e+02 Score=24.75 Aligned_cols=94 Identities=16% Similarity=0.103 Sum_probs=53.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEc-CCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILF-APFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~-~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++. ...-..... .+...+.++..+..+-. |.+.+++.+..
T Consensus 9 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~~~~ 84 (255)
T 3icc_A 9 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLE----SLHGVEALYSSLDNELQ 84 (255)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTT----SHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcC----CHHHHHHHHHHHHHHhc
Confidence 57777776666677778888889888763 433333322 33445777777776532 44455444322
Q ss_pred ------CCcEEEecCCCCCccc--CCCHHHHHHHHH
Q 013883 242 ------NTRAILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 ------~~~~i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
+...++.+.-..+.+. ..+.++++++.+
T Consensus 85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 120 (255)
T 3icc_A 85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVS 120 (255)
T ss_dssp HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHh
Confidence 1444544433333332 346777777655
No 449
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=37.52 E-value=51 Score=30.00 Aligned_cols=54 Identities=15% Similarity=0.146 Sum_probs=36.6
Q ss_pred CCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++ .+...|+++ -++--+..++.+|.+++++.+.+. ++.||.
T Consensus 15 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (292)
T 2ojp_A 15 EKGNVCRASLKKLIDYHVASGTSAIVSV-GTTGESATLNHDEHADVVMMTLDLADGRIPVIA 75 (292)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 367889888888664 367777653 233345578888888888877653 466663
No 450
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=37.44 E-value=33 Score=31.52 Aligned_cols=54 Identities=7% Similarity=0.144 Sum_probs=38.2
Q ss_pred CCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++ .+...|+++ -.+--+..++.+|.+++++.+.+. ++.||.
T Consensus 25 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 25 QQQALDKASLRRLVQFNIQQGIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 467899998888664 367777763 333345578999999998887763 577774
No 451
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=37.25 E-value=49 Score=30.24 Aligned_cols=101 Identities=14% Similarity=0.127 Sum_probs=55.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCch----hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYD----SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAI 246 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~----~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i 246 (434)
.|++|.|+......+...|++.|..|++..-.-. .........+..+..+..|- -|.+.+++++.. +..+|
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl----~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDV----SDERALARIFDAHPITAA 82 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCT----TCHHHHHHHHHHSCCCEE
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeec----CCHHHHHHHHhccCCcEE
Confidence 5777776666666777788888988877543211 12222222344444444332 267888888765 56777
Q ss_pred EecCCCCCcccCC--C-------HHHHHHHHHHHHHcCc
Q 013883 247 LMNTPHNPTGKMF--T-------REELNVIASLCIENDV 276 (434)
Q Consensus 247 ~~~~p~NPTG~~~--~-------~e~l~~i~~la~~~~~ 276 (434)
+++......+... + ..-...+++.|++.++
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 121 (341)
T 3enk_A 83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV 121 (341)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7654433322110 0 1113456777877753
No 452
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=36.99 E-value=47 Score=30.26 Aligned_cols=53 Identities=13% Similarity=0.119 Sum_probs=36.2
Q ss_pred CCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEE
Q 013883 226 PDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVF 279 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI 279 (434)
+++.+|.+.+++.++ .+...|+++ -.+-=+..++.+|.+++++.+.+. ++.||
T Consensus 17 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 76 (294)
T 3b4u_A 17 TDGTVDIDAMIAHARRCLSNGCDSVTLF-GTTGEGCSVGSRERQAILSSFIAAGIAPSRIV 76 (294)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 367889888888664 367777653 233345578888999998888764 34454
No 453
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=36.69 E-value=47 Score=30.57 Aligned_cols=54 Identities=11% Similarity=0.040 Sum_probs=36.6
Q ss_pred CCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc--CcEEEE
Q 013883 226 PDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN--DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~--~~~iI~ 280 (434)
+++.+|.+.+++.++ .+...|+++. .+--+..++.+|.+++++.+.+. ++.||.
T Consensus 22 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 22 DDGKIDDVSIDRLTDFYAEVGCEGVTVLG-ILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEEST-GGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCEEEeCc-cCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 467888888887664 3677776532 23334577888888888877664 577764
No 454
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=36.65 E-value=1.2e+02 Score=26.59 Aligned_cols=65 Identities=14% Similarity=-0.026 Sum_probs=36.6
Q ss_pred cEEEcCC--hHHHHHHHHHHccCCCCeEEEcCCCchh-HHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcc
Q 013883 172 EVTVTSG--CTEAIAATILGLINPGDEVILFAPFYDS-YEATLSMAGAKIKCITLRPPDFAIPIEELKSTIS 240 (434)
Q Consensus 172 ~i~~t~G--~~~ai~~~~~~l~~~gd~Vlv~~p~y~~-~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~ 240 (434)
.+++|.| +...-..+...|.+.|-.|++.+-.-.. .....+..+.++..+..|-. |.+.+++++.
T Consensus 9 ~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~v~~~~~ 76 (269)
T 2h7i_A 9 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQ----NEEHLASLAG 76 (269)
T ss_dssp EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTT----CHHHHHHHHH
T ss_pred EEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCC----CHHHHHHHHH
Confidence 5666665 4555566667778888888776543322 23344444555555555421 4566665554
No 455
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=36.22 E-value=1e+02 Score=32.77 Aligned_cols=27 Identities=19% Similarity=0.292 Sum_probs=23.7
Q ss_pred CcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 254 PTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 254 PTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+.|-.++.+++++|++.|+++++-||=
T Consensus 392 ~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 392 VYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp CEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 446689999999999999999998883
No 456
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=36.18 E-value=73 Score=29.69 Aligned_cols=77 Identities=8% Similarity=0.093 Sum_probs=49.2
Q ss_pred CCCchhHHHHHHHc-CCEEEEEEcCCCCCCCCHHHHHhhcc-cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEE
Q 013883 201 APFYDSYEATLSMA-GAKIKCITLRPPDFAIPIEELKSTIS-KNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLV 278 (434)
Q Consensus 201 ~p~y~~~~~~~~~~-G~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~i 278 (434)
-|.|....++.... ++++.-+-..+ .+ -.+.+.+++. .+.+.+++.+- | ++.++.++|.++|+++++.|
T Consensus 64 vpvy~sv~ea~~~~p~~DlaVi~vp~-~~--a~~ai~ea~~~~Gv~~vViiT~----G--~~e~~~~~l~~~a~~~g~rl 134 (334)
T 3mwd_B 64 IPVFKNMADAMRKHPEVDVLINFASL-RS--AYDSTMETMNYAQIRTIAIIAE----G--IPEALTRKLIKKADQKGVTI 134 (334)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCT-TT--HHHHHHHHTTSTTCCEEEECCS----C--CCHHHHHHHHHHHHHHTCEE
T ss_pred ceeeCCHHHHhhcCCCCcEEEEecCH-HH--HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEE
Confidence 47777788777654 35544432222 11 2466667777 67887776433 3 34467889999999999998
Q ss_pred EEcCcCCc
Q 013883 279 FSDEVYDK 286 (434)
Q Consensus 279 I~Deay~~ 286 (434)
|==++...
T Consensus 135 iGPNc~Gi 142 (334)
T 3mwd_B 135 IGPATVGG 142 (334)
T ss_dssp ECSSCCCE
T ss_pred EccCCccc
Confidence 86555543
No 457
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=36.12 E-value=63 Score=32.48 Aligned_cols=97 Identities=20% Similarity=0.120 Sum_probs=57.8
Q ss_pred cEEEcCChH----HHHHHHHH-----HccCCCCeEEEcCCCchhH-------HHHHHHcCCEEEEEEcC--CCCCCCCHH
Q 013883 172 EVTVTSGCT----EAIAATIL-----GLINPGDEVILFAPFYDSY-------EATLSMAGAKIKCITLR--PPDFAIPIE 233 (434)
Q Consensus 172 ~i~~t~G~~----~ai~~~~~-----~l~~~gd~Vlv~~p~y~~~-------~~~~~~~G~~~~~v~~~--~~~~~~d~~ 233 (434)
-|++++|++ .++..+.. ...+++|.|++....+++. ...+...|++++..... .-...-|.+
T Consensus 308 ~vi~~tg~~ge~~~~l~ria~~~h~~~~~~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~ 387 (562)
T 3bk2_A 308 VLILATGSQGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQE 387 (562)
T ss_dssp EEEEECCTTSCSHHHHHHHHTTCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHH
T ss_pred EEEEEcCCCchhHHHHHhhhhcccccccCCCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHH
Confidence 367777753 22332221 1237899999988766653 33345678888653211 113455778
Q ss_pred HHHhhccc-CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCc
Q 013883 234 ELKSTISK-NTRAILMNTPHNPTGKMFTREELNVIASLCIENDV 276 (434)
Q Consensus 234 ~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~ 276 (434)
+|+..++. +++-++..+ | ....+.++++++++.|+
T Consensus 388 eL~~~i~~~~Pk~vipvH-----G---e~~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 388 ELKLILNLTTPRFFLPWH-----G---EVRHQMNFKWLAESMSR 423 (562)
T ss_dssp HHHHHHHHHCCSEEEEES-----B---CHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHhcCCCEEEEEc-----C---CHHHHHHHHHHHHHcCC
Confidence 88877755 677776543 2 23356777788887664
No 458
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=36.10 E-value=73 Score=29.25 Aligned_cols=118 Identities=9% Similarity=0.080 Sum_probs=60.6
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHHccCCCCeEEEcCCCc----hhHHHHHHHc----CCEE
Q 013883 147 GVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFY----DSYEATLSMA----GAKI 218 (434)
Q Consensus 147 G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y----~~~~~~~~~~----G~~~ 218 (434)
|..+..+.+.+.+. .... .|++|.|+......++..|++.|.+|++..-.- .......... +.++
T Consensus 11 ~~~~~~~~~~~~~~------~~~~-~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 83 (352)
T 1sb8_A 11 GMMSRYEELRKELP------AQPK-VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 83 (352)
T ss_dssp -CCCHHHHHHHHHH------HSCC-EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTE
T ss_pred HHHHHHHhhchhcC------ccCC-eEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCce
Confidence 45556666666654 2233 677777755566666777777787777653221 1122222111 1234
Q ss_pred EEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccC-CCH--------HHHHHHHHHHHHcCc
Q 013883 219 KCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKM-FTR--------EELNVIASLCIENDV 276 (434)
Q Consensus 219 ~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~-~~~--------e~l~~i~~la~~~~~ 276 (434)
..+..|- .|.+.+++++. +..+|+.+......+.. -.. .-...+++.|++.++
T Consensus 84 ~~~~~Dl----~d~~~~~~~~~-~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 145 (352)
T 1sb8_A 84 KFIQGDI----RNLDDCNNACA-GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV 145 (352)
T ss_dssp EEEECCT----TSHHHHHHHHT-TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EEEECCC----CCHHHHHHHhc-CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4444332 15677887776 66777765432221100 011 113457778887764
No 459
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=36.06 E-value=25 Score=34.27 Aligned_cols=31 Identities=16% Similarity=0.337 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccccC
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLAFE 290 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~~~ 290 (434)
+.++++++++-|+++|+-||.|-++.+...+
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~~ 93 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHMAAG 93 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEECSS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeeccccCC
Confidence 5889999999999999999999999876543
No 460
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=35.99 E-value=22 Score=34.54 Aligned_cols=28 Identities=11% Similarity=0.363 Sum_probs=24.7
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCcEEEE
Q 013883 253 NPTGKMFTREELNVIASLCIENDVLVFS 280 (434)
Q Consensus 253 NPTG~~~~~e~l~~i~~la~~~~~~iI~ 280 (434)
+|.|-.++++++++|++.|++++|-||=
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 3567789999999999999999999984
No 461
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=35.81 E-value=19 Score=26.09 Aligned_cols=23 Identities=22% Similarity=0.095 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHcCcEEEEcCcCC
Q 013883 263 ELNVIASLCIENDVLVFSDEVYD 285 (434)
Q Consensus 263 ~l~~i~~la~~~~~~iI~Deay~ 285 (434)
.-.+|.++|+++|+.++.|..-.
T Consensus 28 ~A~~I~~~A~e~~VPi~e~~~LA 50 (83)
T 3bzy_B 28 KALQIIKLAELYDIPVIEDIPLA 50 (83)
T ss_dssp HHHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHHcCCCEEeCHHHH
Confidence 56789999999999999997543
No 462
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=35.61 E-value=1.8e+02 Score=25.66 Aligned_cols=94 Identities=11% Similarity=0.113 Sum_probs=51.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcC--CEEEEEEcCCCCCCCCHHHHHhhccc------CC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAG--AKIKCITLRPPDFAIPIEELKSTISK------NT 243 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G--~~~~~v~~~~~~~~~d~~~l~~~i~~------~~ 243 (434)
.+++|.|+......+...|.+.|..|++.+-.-........... .++..+..|- -|.+.+++++.. +.
T Consensus 23 ~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv----~d~~~v~~~~~~~~~~~g~i 98 (272)
T 2nwq_A 23 TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDV----RDRAAMSAAVDNLPEEFATL 98 (272)
T ss_dssp EEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCT----TCHHHHHHHHHTCCGGGSSC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCC----CCHHHHHHHHHHHHHHhCCC
Confidence 57777776666666777788889888876554333444433332 2555555552 156666665543 34
Q ss_pred cEEEecCCCCC-cc--cCCCHHHHHHHHH
Q 013883 244 RAILMNTPHNP-TG--KMFTREELNVIAS 269 (434)
Q Consensus 244 ~~i~~~~p~NP-TG--~~~~~e~l~~i~~ 269 (434)
.+++.+.-... .+ ...+.++|+++.+
T Consensus 99 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~ 127 (272)
T 2nwq_A 99 RGLINNAGLALGTDPAQSCDLDDWDTMVD 127 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 55554322211 12 2346677766544
No 463
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=35.43 E-value=62 Score=28.66 Aligned_cols=91 Identities=14% Similarity=0.144 Sum_probs=48.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+......+...|.+.|..|++..-.-... -.....++..+..|- -|.+.+++++.. +..+
T Consensus 18 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~Dv----~d~~~v~~~~~~~~~~~g~iD~ 90 (266)
T 3p19_A 18 LVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL---KALNLPNTLCAQVDV----TDKYTFDTAITRAEKIYGPADA 90 (266)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH---HTTCCTTEEEEECCT----TCHHHHHHHHHHHHHHHCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH---HHhhcCCceEEEecC----CCHHHHHHHHHHHHHHCCCCCE
Confidence 567777766666667778888897777754432211 112222444455442 145666655542 3445
Q ss_pred EEecCCCCCccc--CCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTGK--MFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG~--~~~~e~l~~i~~ 269 (434)
++.+.-..+.+. ..+.++|+++.+
T Consensus 91 lvnnAg~~~~~~~~~~~~~~~~~~~~ 116 (266)
T 3p19_A 91 IVNNAGMMLLGQIDTQEANEWQRMFD 116 (266)
T ss_dssp EEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHH
Confidence 544332222222 346777776654
No 464
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=35.16 E-value=1.9e+02 Score=25.11 Aligned_cols=94 Identities=13% Similarity=0.127 Sum_probs=51.8
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEc-CCCchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILF-APFYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~-~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++. ...-..... .+...+.++..+..|-. |.+.++++++.
T Consensus 9 ~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----~~~~v~~~~~~~~~~~g 84 (264)
T 3i4f_A 9 HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVT----KKEDLHKIVEEAMSHFG 84 (264)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTT----SHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCC----CHHHHHHHHHHHHHHhC
Confidence 57777776666667778888889887775 333222222 22234556666666531 45666665542
Q ss_pred CCcEEEecCC--CCCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTP--HNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p--~NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.- ..+.+ ...+.+++++..+
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~ 116 (264)
T 3i4f_A 85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQ 116 (264)
T ss_dssp CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCcccccCCCccccCCHHHHHHHHH
Confidence 4556654432 11111 2346677766554
No 465
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=35.11 E-value=1.2e+02 Score=26.77 Aligned_cols=86 Identities=10% Similarity=0.033 Sum_probs=51.2
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNT 250 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~ 250 (434)
.|++|.|+......+...|++.|.+|.+..-. +.+ -.|.+.+++++.. +..+|+++.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------~~D----~~d~~~~~~~~~~~~~d~vi~~a 64 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------LLD----ITNISQVQQVVQEIRPHIIIHCA 64 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------TSC----TTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------ccC----CCCHHHHHHHHHhcCCCEEEECC
Confidence 47777766666666777888888777766540 011 2267888888875 677777654
Q ss_pred CCCCccc-CCCHHH--------HHHHHHHHHHcCcEEE
Q 013883 251 PHNPTGK-MFTREE--------LNVIASLCIENDVLVF 279 (434)
Q Consensus 251 p~NPTG~-~~~~e~--------l~~i~~la~~~~~~iI 279 (434)
....... .-..++ ...+++.|+++++.+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v 102 (287)
T 3sc6_A 65 AYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLV 102 (287)
T ss_dssp CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEE
T ss_pred cccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 3222111 112222 2458888888876544
No 466
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=35.05 E-value=38 Score=30.96 Aligned_cols=77 Identities=10% Similarity=0.198 Sum_probs=47.9
Q ss_pred CCCchhHHHHHHHcC-CEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEE
Q 013883 201 APFYDSYEATLSMAG-AKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVF 279 (434)
Q Consensus 201 ~p~y~~~~~~~~~~G-~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI 279 (434)
-|.|....++.+..+ .++..+-..+ ..-.+.++++++.+.+.+++.+ +| ++.++.++|.+.|+++++.++
T Consensus 56 ~~vy~sl~el~~~~~~~DvaIi~vp~---~~~~~~v~ea~~~Gi~~vVi~t----~G--~~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 56 VPVYDSVKEALAEHPEINTSIVFVPA---PFAPDAVYEAVDAGIRLVVVIT----EG--IPVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCG---GGHHHHHHHHHHTTCSEEEECC----CC--CCHHHHHHHHHHHHHHTCEEE
T ss_pred EeeeCCHHHHhhcCCCCCEEEEecCH---HHHHHHHHHHHHCCCCEEEEEC----CC--CCHHHHHHHHHHHHHcCCEEE
Confidence 345566666655323 4444332222 1136777888888888665422 34 356778999999999999888
Q ss_pred EcCcCCc
Q 013883 280 SDEVYDK 286 (434)
Q Consensus 280 ~Deay~~ 286 (434)
-..+..-
T Consensus 127 GPNc~Gi 133 (297)
T 2yv2_A 127 GPNCPGA 133 (297)
T ss_dssp CSSSCEE
T ss_pred cCCCCee
Confidence 7775543
No 467
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=34.94 E-value=2.2e+02 Score=25.56 Aligned_cols=75 Identities=15% Similarity=0.139 Sum_probs=42.7
Q ss_pred CCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc---cc-CCcEEEecCCCCCcccCCCHHHHHHHH
Q 013883 193 PGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI---SK-NTRAILMNTPHNPTGKMFTREELNVIA 268 (434)
Q Consensus 193 ~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i---~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~ 268 (434)
++..+++..|.|.-+ ++.+|++++.+.-...+..+....|.+.+ ++ +.++|+...-.++ ...+
T Consensus 178 ~~~~~v~~H~af~Yf---~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~--- 244 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYL---AKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIAH--- 244 (286)
T ss_dssp SCCEEEEEESCCHHH---HHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHHH---
T ss_pred CCCEEEEECCchHHH---HHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHHH---
Confidence 577888888877644 56789998876533234455555555544 33 5677766432222 1222
Q ss_pred HHHHHcCcEEEE
Q 013883 269 SLCIENDVLVFS 280 (434)
Q Consensus 269 ~la~~~~~~iI~ 280 (434)
.++++.|+.++.
T Consensus 245 ~la~~~g~~v~~ 256 (286)
T 3gi1_A 245 AIAKSTGAKVKT 256 (286)
T ss_dssp HHHHTTTCEEEE
T ss_pred HHHHHhCCeEEE
Confidence 346777877764
No 468
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=34.84 E-value=43 Score=30.94 Aligned_cols=54 Identities=13% Similarity=0.153 Sum_probs=33.5
Q ss_pred CCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++ .+...|+++. .+--+..++.+|.+++++.+.+. ++.||.
T Consensus 37 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 37 AQGRLDWDSLAKLVDFHLQEGTNAIVAVG-TTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEESS-GGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECc-cccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 356788887777554 3666666532 23334467788888887776553 455554
No 469
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=34.56 E-value=46 Score=30.72 Aligned_cols=57 Identities=19% Similarity=0.214 Sum_probs=0.0
Q ss_pred EcCCCCCCCCHHHHHhhccc----CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 222 TLRPPDFAIPIEELKSTISK----NTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 222 ~~~~~~~~~d~~~l~~~i~~----~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
|+++ ++.+|.+.+++.++. +...|++ +-.+--+..++.+|.+++++.+.+. ++.||.
T Consensus 33 Pf~~-dg~iD~~~l~~li~~li~~Gv~Gl~v-~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 33 PFDD-NGAIDEKAFCNFVEWQITQGINGVSP-VGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp CBCT-TSCBCHHHHHHHHHHHHHTTCSEEEC-SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCC-CCCcCHHHHHHHHHHHHHcCCCEEEe-CccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
No 470
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=34.46 E-value=32 Score=33.35 Aligned_cols=29 Identities=10% Similarity=0.119 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 57899999999999999999999987654
No 471
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=34.44 E-value=3.1e+02 Score=26.94 Aligned_cols=99 Identities=12% Similarity=0.136 Sum_probs=57.0
Q ss_pred CCCCCcEEEcCChHHHHHHHHHHccCCCC-eEEEcCCC------chhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc
Q 013883 167 VDPEKEVTVTSGCTEAIAATILGLINPGD-EVILFAPF------YDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI 239 (434)
Q Consensus 167 ~~~~~~i~~t~G~~~ai~~~~~~l~~~gd-~Vlv~~p~------y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i 239 (434)
+.++..++||.|+...-..+...|.+.|. .|++..-. -......+...|.++..+..|-. |.+.+++++
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvt----d~~~v~~~~ 331 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVA----ERDALAALV 331 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSS----CHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCC----CHHHHHHHH
Confidence 34454566666655555556667777786 45543221 12233344556888888877632 677888877
Q ss_pred cc-CCcEEEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 240 SK-NTRAILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 240 ~~-~~~~i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
.. +..+|+++.-....+ ...+.++++++.+
T Consensus 332 ~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~ 364 (511)
T 2z5l_A 332 TAYPPNAVFHTAGILDDAVIDTLSPESFETVRG 364 (511)
T ss_dssp HHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hcCCCcEEEECCcccCCcccccCCHHHHHHHHH
Confidence 65 456676654333233 2356777776654
No 472
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=34.33 E-value=25 Score=36.62 Aligned_cols=28 Identities=18% Similarity=0.172 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 261 REELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 261 ~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
.++++++++-|+++|+-||.|-+|.+..
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 281 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTA 281 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 6899999999999999999999998654
No 473
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=34.22 E-value=1.4e+02 Score=26.56 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=51.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCC-CchhHHH---HHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAP-FYDSYEA---TLSMAGAKIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p-~y~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+...-..+...|.+.|..|++..- .-..... .+...|.++..+..|-. |.+.+++++..
T Consensus 31 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 31 VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLA----DLSSHQATVDAVVAEFG 106 (280)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTT----SGGGHHHHHHHHHHHHS
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCC----CHHHHHHHHHHHHHHcC
Confidence 5677766666666777788888988877642 3332222 23445777777776632 33444443331
Q ss_pred CCcEEEecCCC--CCcc--cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTPH--NPTG--KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p~--NPTG--~~~~~e~l~~i~~ 269 (434)
+..+++.+.-. .+.+ ...+.++|+++.+
T Consensus 107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~ 138 (280)
T 4da9_A 107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVG 138 (280)
T ss_dssp CCCEEEEECC------CCGGGCCHHHHHHHTT
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHH
Confidence 45666654322 1111 1346777776543
No 474
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=33.92 E-value=48 Score=34.34 Aligned_cols=29 Identities=10% Similarity=0.161 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 310 t~~df~~Lv~~aH~~GikVilD~V~NHts 338 (696)
T 4aee_A 310 TMEDFEKLVQVLHSRKIKIVLDITMHHTN 338 (696)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEeccccccC
Confidence 68999999999999999999999987654
No 475
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=33.75 E-value=1.2e+02 Score=27.02 Aligned_cols=95 Identities=13% Similarity=0.073 Sum_probs=51.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEc-CCCc---hhHHHH---HHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCc
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILF-APFY---DSYEAT---LSMAGAKIKCITLRPPDFAIPIEELKSTISKNTR 244 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~-~p~y---~~~~~~---~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~ 244 (434)
.|++|.|+......++..|++.|..|.+. ...- +.-... +...|++++...+. |.+.+.++++ +..
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~------d~~~l~~~~~-~~d 78 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD------DHQRLVDALK-QVD 78 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSS------CHHHHHHHHT-TCS
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCC------CHHHHHHHHh-CCC
Confidence 57777664444555666677677666553 3221 111111 22346655543332 6788888886 466
Q ss_pred EEEecCCCCCcccCCCHHHHHHHHHHHHHcC
Q 013883 245 AILMNTPHNPTGKMFTREELNVIASLCIEND 275 (434)
Q Consensus 245 ~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~ 275 (434)
+|+.+......+. ....-+.+++.|++.+
T Consensus 79 ~vi~~a~~~~~~~--~~~~~~~l~~aa~~~g 107 (313)
T 1qyd_A 79 VVISALAGGVLSH--HILEQLKLVEAIKEAG 107 (313)
T ss_dssp EEEECCCCSSSST--TTTTHHHHHHHHHHSC
T ss_pred EEEECCccccchh--hHHHHHHHHHHHHhcC
Confidence 7766544221111 1123467888898887
No 476
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=33.70 E-value=62 Score=31.29 Aligned_cols=29 Identities=21% Similarity=0.287 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~~ 110 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHTS 110 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCc
Confidence 67899999999999999999999986654
No 477
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=33.70 E-value=37 Score=31.24 Aligned_cols=53 Identities=13% Similarity=0.173 Sum_probs=33.0
Q ss_pred CCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 227 DFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 227 ~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
++.+|.+.+++.++ .+...|+++. .+--+..++.+|.+++++.+.+. ++.||.
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~gl~v~G-tTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDAGSDGLCILA-NFSEQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESS-GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECc-cccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 56788887777664 3566666532 22334467788888888777653 455553
No 478
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=33.62 E-value=55 Score=31.36 Aligned_cols=56 Identities=20% Similarity=0.219 Sum_probs=38.1
Q ss_pred HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCC--cccCCCHHHHHHHHHHHHHcCcEEEEcCcC
Q 013883 208 EATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNP--TGKMFTREELNVIASLCIENDVLVFSDEVY 284 (434)
Q Consensus 208 ~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NP--TG~~~~~e~l~~i~~la~~~~~~iI~Deay 284 (434)
...++.+|++.+.+|+....+... +.+| .| ...+.++++++.|+++|+.||+|--.
T Consensus 79 ~~~i~~~G~N~VRipi~~~~~~~~-------------------~~~py~~~--~~l~~ld~vv~~a~~~Gi~VilDlH~ 136 (408)
T 1h4p_A 79 FANIASQGFNLVRIPIGYWAFQIL-------------------DDDPYVSG--LQESYLDQAIGWARNNSLKVWVDLHG 136 (408)
T ss_dssp HHHHHHTTCCEEEEEEEGGGTCCC-------------------TTCCCCCS--SHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHCCCCEEEccCCHHHcccC-------------------CCCCCccc--cHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 445678999999999863111110 1122 12 14567999999999999999999754
No 479
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=33.60 E-value=21 Score=31.95 Aligned_cols=50 Identities=24% Similarity=0.240 Sum_probs=35.7
Q ss_pred CCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 227 DFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 227 ~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
+|.+|.-.+.++..-+..+|++... .++.++++++.+.|++.|..+++|-
T Consensus 108 Dfi~~~~qi~ea~~~GAD~ilLi~a------~l~~~~l~~l~~~a~~lGl~~lvEv 157 (251)
T 1i4n_A 108 DFYIDTVQVKLASSVGADAILIIAR------ILTAEQIKEIYEAAEELGMDSLVEV 157 (251)
T ss_dssp CCCCSTHHHHHHHHTTCSEEEEEGG------GSCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred eCCCCHHHHHHHHHcCCCEEEEecc------cCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 4666655566655557777766432 4567889999999999999999874
No 480
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=33.27 E-value=79 Score=29.33 Aligned_cols=11 Identities=18% Similarity=0.286 Sum_probs=6.2
Q ss_pred CeEEEcCCCch
Q 013883 195 DEVILFAPFYD 205 (434)
Q Consensus 195 d~Vlv~~p~y~ 205 (434)
|.|++..|...
T Consensus 69 D~V~i~tp~~~ 79 (352)
T 3kux_A 69 DLIVIPTPNDT 79 (352)
T ss_dssp CEEEECSCTTT
T ss_pred CEEEEeCChHH
Confidence 56666555444
No 481
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=33.23 E-value=34 Score=32.72 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 47899999999999999999999987754
No 482
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=33.23 E-value=27 Score=31.90 Aligned_cols=76 Identities=9% Similarity=0.123 Sum_probs=47.2
Q ss_pred CCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHcCcEEEEc
Q 013883 202 PFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSD 281 (434)
Q Consensus 202 p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~~~~iI~D 281 (434)
|.|....++.+....++..+-..+ . .-.+.++++++.+.+.+++. .+|. +.++.++|.+.|+++++.++-.
T Consensus 57 ~vy~sl~el~~~~~~Dv~ii~vp~-~--~~~~~v~ea~~~Gi~~vVi~----t~G~--~~~~~~~l~~~A~~~gi~viGP 127 (294)
T 2yv1_A 57 PVFDTVKEAVKETDANASVIFVPA-P--FAKDAVFEAIDAGIELIVVI----TEHI--PVHDTMEFVNYAEDVGVKIIGP 127 (294)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCH-H--HHHHHHHHHHHTTCSEEEEC----CSCC--CHHHHHHHHHHHHHHTCEEECS
T ss_pred eeeCCHHHHhhcCCCCEEEEccCH-H--HHHHHHHHHHHCCCCEEEEE----CCCC--CHHHHHHHHHHHHHcCCEEEcC
Confidence 445556666653344444332221 1 12566777777788866542 2343 5677899999999999988877
Q ss_pred CcCCc
Q 013883 282 EVYDK 286 (434)
Q Consensus 282 eay~~ 286 (434)
.+..-
T Consensus 128 Nc~Gi 132 (294)
T 2yv1_A 128 NTPGI 132 (294)
T ss_dssp SCCEE
T ss_pred CCcee
Confidence 75543
No 483
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=33.09 E-value=1.2e+02 Score=27.80 Aligned_cols=88 Identities=13% Similarity=0.180 Sum_probs=42.7
Q ss_pred cEEEcCC---hHHHHHHHHHHccCCCCeEEEcCCCchh--H--HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCc
Q 013883 172 EVTVTSG---CTEAIAATILGLINPGDEVILFAPFYDS--Y--EATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTR 244 (434)
Q Consensus 172 ~i~~t~G---~~~ai~~~~~~l~~~gd~Vlv~~p~y~~--~--~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~ 244 (434)
.|+++.| ..+++.++-.+---.-|.|++..|.|.. . ..+.+. +..+.++. +..
T Consensus 82 pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~------------------f~~ia~a~--~lP 141 (318)
T 3qfe_A 82 PIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSF------------------FDDVSCQS--PLP 141 (318)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHH------------------HHHHHHHC--SSC
T ss_pred cEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHH------------------HHHHHhhC--CCC
Confidence 4666544 4566665543332233899999997752 1 111110 12222222 355
Q ss_pred EEEecCCCCCcccCCCHHHHHHHHHHHHHc-CcEEEEcC
Q 013883 245 AILMNTPHNPTGKMFTREELNVIASLCIEN-DVLVFSDE 282 (434)
Q Consensus 245 ~i~~~~p~NPTG~~~~~e~l~~i~~la~~~-~~~iI~De 282 (434)
+++++.|..-+|+.++.+.+.+| ++++ |+.=|=|.
T Consensus 142 iilYn~P~~t~g~~l~~~~~~~L---a~~~pnIvgiKds 177 (318)
T 3qfe_A 142 VVIYNFPGVCNGIDLDSDMITTI---ARKNPNVVGVKLT 177 (318)
T ss_dssp EEEEECCC----CCCCHHHHHHH---HHHCTTEEEEEES
T ss_pred EEEEeCCcccCCCCCCHHHHHHH---HhhCCCEEEEEeC
Confidence 66776665545888887765544 4443 54445544
No 484
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=33.04 E-value=1.9e+02 Score=26.31 Aligned_cols=146 Identities=19% Similarity=0.299 Sum_probs=73.5
Q ss_pred CCcHHHHHHHHHHHHcCCCCC--CCCCCcHHHHHHHHHHHHhhcCCCCCCCCcEEEcCC------hH----HHHHHHHHH
Q 013883 122 DGPDFVKDAAIQAIRDGKNQY--ARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSG------CT----EAIAATILG 189 (434)
Q Consensus 122 ~~~~~v~~~~~~~~~~~~~~Y--~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~~t~G------~~----~ai~~~~~~ 189 (434)
.......+.+..+++.+...+ .+.+|. .+.+.+.+++ .+ +..+ ++++++= +. .++...+..
T Consensus 62 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~---E~~lG~al~~-~~--~~R~-~v~I~TK~~~~~~~~~~i~~~~e~SL~r 134 (310)
T 3b3e_A 62 ENGNEATESVKAAIKNGYRSIDTAAIYKN---EEGVGIGIKE-SG--VARE-ELFITSKVWNEDQGYETTLAAFEKSLER 134 (310)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEECCGGGSC---HHHHHHHHHH-SS--SCGG-GCEEEEEECGGGCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEECCCccCC---HHHHHHHHHh-cC--CCcc-eEEEEEeCCCCCCCHHHHHHHHHHHHHH
Confidence 345677888888887753211 112232 3445666653 22 2234 5655421 12 233333444
Q ss_pred c-cCCCCeEEEcCCCchhHHHH---HHH--cCCEEEEEEcCCCCCCCCHHHHHhhccc-CCcEEEecCCCCCcccCCCHH
Q 013883 190 L-INPGDEVILFAPFYDSYEAT---LSM--AGAKIKCITLRPPDFAIPIEELKSTISK-NTRAILMNTPHNPTGKMFTRE 262 (434)
Q Consensus 190 l-~~~gd~Vlv~~p~y~~~~~~---~~~--~G~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~i~~~~p~NPTG~~~~~e 262 (434)
+ ++.=|-+++-.|....+... ++. -..++..+.+. ++ +.+.+++++.. +.+.++.....||.-. .
T Consensus 135 Lg~dyiDl~~lH~p~~~~~~e~~~al~~l~~~Gkir~iGvS--n~--~~~~l~~~~~~~~~~p~~~Q~~~~~~~~---~- 206 (310)
T 3b3e_A 135 LQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVS--NF--QVHHLEELLKDAEIKPMVNQVEFHPRLT---Q- 206 (310)
T ss_dssp HTCSCEEEEEESCCCSSCHHHHHHHHHHHHHTTSEEEEEEE--SC--CHHHHHHHHHHCSSCCSEEEEECBTTBC---C-
T ss_pred hCCCeeEEEEeeCCCcccHHHHHHHHHHHHHcCCcceEeec--CC--CHHHHHHHHHhcCCCcceeeeeccCccC---C-
Confidence 4 23336677766654322222 221 12356666554 33 56777776653 2222222222344221 1
Q ss_pred HHHHHHHHHHHcCcEEEEcCcCCcc
Q 013883 263 ELNVIASLCIENDVLVFSDEVYDKL 287 (434)
Q Consensus 263 ~l~~i~~la~~~~~~iI~Deay~~~ 287 (434)
+++.++|+++|+.++. |..+
T Consensus 207 --~~l~~~~~~~gi~v~a---~spL 226 (310)
T 3b3e_A 207 --KELRDYCKGQGIQLEA---WSPL 226 (310)
T ss_dssp --HHHHHHHHHHTCEEEE---ESTT
T ss_pred --HHHHHHHHHcCCEEEE---eccc
Confidence 4688999999999986 5554
No 485
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=32.70 E-value=73 Score=26.69 Aligned_cols=92 Identities=12% Similarity=0.034 Sum_probs=49.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCC
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTP 251 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p 251 (434)
.|++|.++...-..+...|++.|.+|.+..-.-....... .+++++...+.+. +. +++ .+..+|+.+..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~------~~--~~~-~~~d~vi~~ag 70 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDL------TL--SDL-SDQNVVVDAYG 70 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGC------CH--HHH-TTCSEEEECCC
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccCh------hh--hhh-cCCCEEEECCc
Confidence 3666666555556667777778877776544332222211 4566555444321 11 333 24667776544
Q ss_pred CCCcccCCCHHHHHHHHHHHHHc
Q 013883 252 HNPTGKMFTREELNVIASLCIEN 274 (434)
Q Consensus 252 ~NPTG~~~~~e~l~~i~~la~~~ 274 (434)
..+.......+-.+.+++.|++.
T Consensus 71 ~~~~~~~~~~~~~~~l~~a~~~~ 93 (221)
T 3ew7_A 71 ISPDEAEKHVTSLDHLISVLNGT 93 (221)
T ss_dssp SSTTTTTSHHHHHHHHHHHHCSC
T ss_pred CCccccchHHHHHHHHHHHHHhc
Confidence 33322333344567788888776
No 486
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=32.65 E-value=66 Score=29.57 Aligned_cols=24 Identities=13% Similarity=0.030 Sum_probs=12.9
Q ss_pred CeEEEcCCCchhHHHH--HHHcCCEE
Q 013883 195 DEVILFAPFYDSYEAT--LSMAGAKI 218 (434)
Q Consensus 195 d~Vlv~~p~y~~~~~~--~~~~G~~~ 218 (434)
|.|++..|....+..+ +...|..+
T Consensus 68 D~V~i~tp~~~H~~~~~~al~~GkhV 93 (334)
T 3ohs_X 68 EVAYVGTQHPQHKAAVMLCLAAGKAV 93 (334)
T ss_dssp CEEEECCCGGGHHHHHHHHHHTTCEE
T ss_pred CEEEECCCcHHHHHHHHHHHhcCCEE
Confidence 7777777765544333 23345443
No 487
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=32.56 E-value=54 Score=30.69 Aligned_cols=57 Identities=16% Similarity=0.156 Sum_probs=0.0
Q ss_pred EcCCCCCCCCHHHHHhhccc----CCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 222 TLRPPDFAIPIEELKSTISK----NTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 222 ~~~~~~~~~d~~~l~~~i~~----~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
|+++ ++.+|.+.+++.++. +...|++ +-.+-=+..++.+|.+++++.+.+. ++.||.
T Consensus 42 PF~~-dg~ID~~~l~~lv~~li~~Gv~Gl~v-~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 105 (343)
T 2v9d_A 42 IFTA-DGQLDKPGTAALIDDLIKAGVDGLFF-LGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLI 105 (343)
T ss_dssp CBCT-TSSBCHHHHHHHHHHHHHTTCSCEEE-SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCC-CCCcCHHHHHHHHHHHHHcCCCEEEe-CccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
No 488
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=32.51 E-value=90 Score=28.13 Aligned_cols=76 Identities=11% Similarity=0.057 Sum_probs=45.8
Q ss_pred CeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhc---cc-CCcEEEecCCCCCcccCCCHHHHHHHHHH
Q 013883 195 DEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTI---SK-NTRAILMNTPHNPTGKMFTREELNVIASL 270 (434)
Q Consensus 195 d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i---~~-~~~~i~~~~p~NPTG~~~~~e~l~~i~~l 270 (434)
..+++.+|.|.- .++.+|++.+.+.--.++..+....|.+.+ ++ +.++|+...-.+ ..-.+.|.++
T Consensus 164 ~~~vt~H~af~Y---~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~-------~~~~~~l~~~ 233 (282)
T 3mfq_A 164 RYLVTPHDAFNY---FAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFTESTTN-------PERMKKLQEA 233 (282)
T ss_dssp CEEECSSSCCHH---HHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEECBTTSC-------THHHHHHHHH
T ss_pred cEEEEECchHHH---HHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC-------hHHHHHHHHH
Confidence 456666776653 457789987754221124456666666544 33 677887643222 3356778888
Q ss_pred HHHcCcEEEE
Q 013883 271 CIENDVLVFS 280 (434)
Q Consensus 271 a~~~~~~iI~ 280 (434)
|++.|+.+++
T Consensus 234 a~~~g~~v~~ 243 (282)
T 3mfq_A 234 VKAKGGQVEV 243 (282)
T ss_dssp HHTTSCCCEE
T ss_pred HHhcCCceEE
Confidence 9988876543
No 489
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=32.44 E-value=1.5e+02 Score=25.59 Aligned_cols=87 Identities=14% Similarity=0.123 Sum_probs=46.4
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|.+|++.+-.-.. ...|. ..+..|- -|.+.++++++. +..+
T Consensus 9 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~--~~~~~D~----~d~~~~~~~~~~~~~~~g~id~ 77 (250)
T 2fwm_X 9 NVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPF--ATEVMDV----ADAAQVAQVCQRLLAETERLDA 77 (250)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSS--EEEECCT----TCHHHHHHHHHHHHHHCSCCCE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCc--eEEEcCC----CCHHHHHHHHHHHHHHcCCCCE
Confidence 56777666666666777788888887764322110 11233 3333332 145666665542 4566
Q ss_pred EEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
++.+.-..+.+ ...+.++|+++.+
T Consensus 78 lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 2fwm_X 78 LVNAAGILRMGATDQLSKEDWQQTFA 103 (250)
T ss_dssp EEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHH
Confidence 66543222222 2346777776654
No 490
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=32.30 E-value=37 Score=33.82 Aligned_cols=31 Identities=23% Similarity=0.115 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccccC
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLAFE 290 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~~~ 290 (434)
+.++++++++-|+++|+-||.|-++.+...+
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~ 121 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVPNHMNRG 121 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecCcCCC
Confidence 4789999999999999999999998876543
No 491
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=32.15 E-value=40 Score=33.12 Aligned_cols=29 Identities=14% Similarity=0.186 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~s 108 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPINHTS 108 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 57899999999999999999999987654
No 492
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=32.01 E-value=35 Score=31.61 Aligned_cols=54 Identities=11% Similarity=0.164 Sum_probs=35.4
Q ss_pred CCCCCCHHHHHhhcc----cCCcEEEecCCCCCcccCCCHHHHHHHHHHHHHc---CcEEEE
Q 013883 226 PDFAIPIEELKSTIS----KNTRAILMNTPHNPTGKMFTREELNVIASLCIEN---DVLVFS 280 (434)
Q Consensus 226 ~~~~~d~~~l~~~i~----~~~~~i~~~~p~NPTG~~~~~e~l~~i~~la~~~---~~~iI~ 280 (434)
+++.+|.+.+++.++ .+...|+++. .+--+..++.+|.+++++.+.+. ++.||.
T Consensus 25 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~G-tTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 25 KTDTLDLASQERYYAYLARSGLTGLVILG-TNAEAFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp TTTEECHHHHHHHHHHHHTTTCSEEEESS-GGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEeCc-cccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 367788888887664 3667776532 22233567888888888877663 466664
No 493
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=32.00 E-value=70 Score=28.18 Aligned_cols=88 Identities=11% Similarity=0.035 Sum_probs=49.6
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc------CCcE
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK------NTRA 245 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------~~~~ 245 (434)
.+++|.|+...-..+...|.+.|..|++.+-.-.. ....++..+..|- -|.+.+++++.. +..+
T Consensus 30 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~Dv----~d~~~v~~~~~~~~~~~g~iD~ 99 (260)
T 3un1_A 30 VVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP------SADPDIHTVAGDI----SKPETADRIVREGIERFGRIDS 99 (260)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCC------CSSTTEEEEESCT----TSHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhh------cccCceEEEEccC----CCHHHHHHHHHHHHHHCCCCCE
Confidence 57777776666677778888889888775432111 1122455555542 145666655542 5666
Q ss_pred EEecCCCCCcc--cCCCHHHHHHHHH
Q 013883 246 ILMNTPHNPTG--KMFTREELNVIAS 269 (434)
Q Consensus 246 i~~~~p~NPTG--~~~~~e~l~~i~~ 269 (434)
++.+.-....+ ...+.++++++.+
T Consensus 100 lv~nAg~~~~~~~~~~~~~~~~~~~~ 125 (260)
T 3un1_A 100 LVNNAGVFLAKPFVEMTQEDYDHNLG 125 (260)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 66543322222 2457778877654
No 494
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=31.85 E-value=3.7e+02 Score=26.26 Aligned_cols=95 Identities=16% Similarity=0.160 Sum_probs=54.1
Q ss_pred CcEEEcCChHHHHHHHHHHccCCCC-eEEEcCC------CchhHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc--
Q 013883 171 KEVTVTSGCTEAIAATILGLINPGD-EVILFAP------FYDSYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK-- 241 (434)
Q Consensus 171 ~~i~~t~G~~~ai~~~~~~l~~~gd-~Vlv~~p------~y~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-- 241 (434)
..++||.|+...-..+.+.|.+.|. .|++..- .-......++..|.++..+..|-. |.+.+++++..
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvt----d~~~v~~~~~~i~ 315 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAA----DREALAALLAELP 315 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT----CHHHHHHHHHTCC
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCC----CHHHHHHHHHHHH
Confidence 3567776666655666677777785 5555322 122344456668999988887742 56666666543
Q ss_pred ---CCcEEEecCCCC-Cccc--CCCHHHHHHHHH
Q 013883 242 ---NTRAILMNTPHN-PTGK--MFTREELNVIAS 269 (434)
Q Consensus 242 ---~~~~i~~~~p~N-PTG~--~~~~e~l~~i~~ 269 (434)
+...|+.+.-.. ..+. .++.++++++.+
T Consensus 316 ~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~ 349 (496)
T 3mje_A 316 EDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMR 349 (496)
T ss_dssp TTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHH
T ss_pred HhCCCeEEEECCcccCCCCCcccCCHHHHHHHHH
Confidence 233444432222 2222 356777777664
No 495
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=31.57 E-value=37 Score=33.70 Aligned_cols=29 Identities=17% Similarity=0.253 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~NHts 106 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVNHTS 106 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCCc
Confidence 57899999999999999999999987653
No 496
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=31.32 E-value=38 Score=33.05 Aligned_cols=29 Identities=21% Similarity=0.303 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 47899999999999999999999887654
No 497
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=31.28 E-value=62 Score=30.99 Aligned_cols=53 Identities=19% Similarity=0.207 Sum_probs=37.1
Q ss_pred HHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhcccCCcEEEecCCCCCc--ccCCCHHHHHHHHHHHHHcCcEEEEcC
Q 013883 208 EATLSMAGAKIKCITLRPPDFAIPIEELKSTISKNTRAILMNTPHNPT--GKMFTREELNVIASLCIENDVLVFSDE 282 (434)
Q Consensus 208 ~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~i~~~~p~NPT--G~~~~~e~l~~i~~la~~~~~~iI~De 282 (434)
...++.+|++.+.+|+....+.. .+.+|. | ..+.++++++.|+++|+.||+|-
T Consensus 79 ~~~ik~~G~N~VRipi~~~~~~~-------------------~~~~py~~~---~~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 79 FKQISNLGLNFVRIPIGYWAFQL-------------------LDNDPYVQG---QVQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp HHHHHHTTCCEEEEEEEGGGTCC-------------------CTTCCCCCC---HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHcCCCEEEEcccHHHccC-------------------CCCCccchh---HHHHHHHHHHHHHHCCCEEEEEe
Confidence 44466899999999986311110 011222 3 35789999999999999999995
No 498
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=31.16 E-value=1.9e+02 Score=25.10 Aligned_cols=93 Identities=10% Similarity=0.050 Sum_probs=48.9
Q ss_pred cEEEcCCh--HHHHHHHHHHccCCCCeEEEcCCCch---hHHHHHHHcCCEEEEEEcCCCCCCCCHHHHHhhccc-----
Q 013883 172 EVTVTSGC--TEAIAATILGLINPGDEVILFAPFYD---SYEATLSMAGAKIKCITLRPPDFAIPIEELKSTISK----- 241 (434)
Q Consensus 172 ~i~~t~G~--~~ai~~~~~~l~~~gd~Vlv~~p~y~---~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----- 241 (434)
.+++|.|+ ...-..+...|.+.|..|++..-.-. .........+ ++..+..|- -|.+.+++++..
T Consensus 16 ~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv----~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 16 RILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG-SELVFPCDV----ADDAQIDALFASLKTHW 90 (271)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCT----TCHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC-CcEEEECCC----CCHHHHHHHHHHHHHHc
Confidence 67777765 55556667778888988877643321 1223333333 344455442 145666655532
Q ss_pred -CCcEEEecCCCCCc----cc---CCCHHHHHHHHH
Q 013883 242 -NTRAILMNTPHNPT----GK---MFTREELNVIAS 269 (434)
Q Consensus 242 -~~~~i~~~~p~NPT----G~---~~~~e~l~~i~~ 269 (434)
+..+++.+.-..+. +. ..+.+++++..+
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHD 126 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHH
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHh
Confidence 34444443222221 11 256777777665
No 499
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=31.07 E-value=2.7e+02 Score=24.42 Aligned_cols=94 Identities=12% Similarity=0.053 Sum_probs=51.3
Q ss_pred cEEEcCChHHHHHHHHHHccCCCCeEEEcCCCchhHHHH---HHHcCC-EEEEEEcCCCCCCCCHHHHHhhccc------
Q 013883 172 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT---LSMAGA-KIKCITLRPPDFAIPIEELKSTISK------ 241 (434)
Q Consensus 172 ~i~~t~G~~~ai~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~-~~~~v~~~~~~~~~d~~~l~~~i~~------ 241 (434)
.+++|.|+......+...+.+.|..|++..-.-...... +...|. ++..+..|-. |.+.+++++..
T Consensus 30 ~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 30 KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTME----DMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTT----CHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCC----CHHHHHHHHHHHHHHcC
Confidence 577777766666667777888898888765443333332 222343 6666666531 45555555432
Q ss_pred CCcEEEecCC-CCCcc-cCCCHHHHHHHHH
Q 013883 242 NTRAILMNTP-HNPTG-KMFTREELNVIAS 269 (434)
Q Consensus 242 ~~~~i~~~~p-~NPTG-~~~~~e~l~~i~~ 269 (434)
+..+++.+.. ..+.+ ...+.+++++..+
T Consensus 106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~ 135 (286)
T 1xu9_A 106 GLDMLILNHITNTSLNLFHDDIHHVRKSME 135 (286)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHH
T ss_pred CCCEEEECCccCCCCccccCCHHHHHHHHH
Confidence 5666665522 21111 1235666665544
No 500
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=31.03 E-value=38 Score=32.75 Aligned_cols=29 Identities=24% Similarity=0.279 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcCcCCccc
Q 013883 260 TREELNVIASLCIENDVLVFSDEVYDKLA 288 (434)
Q Consensus 260 ~~e~l~~i~~la~~~~~~iI~Deay~~~~ 288 (434)
+.++++++++-|+++|+-||.|-++.+..
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 57899999999999999999999887654
Done!