Query 013887
Match_columns 434
No_of_seqs 250 out of 1219
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 18:58:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013887.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013887hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jwp_A Malectin, MGC80075; sug 99.9 4.6E-28 1.6E-32 219.2 10.1 153 199-367 5-171 (174)
2 2jwp_A Malectin, MGC80075; sug 99.9 4E-23 1.4E-27 186.8 12.7 147 31-183 7-172 (174)
3 2w3j_A Carbohydrate binding mo 93.3 1.1 3.6E-05 38.1 11.8 89 273-368 39-130 (145)
4 1ogq_A PGIP-2, polygalacturona 93.0 0.12 4.2E-06 49.4 6.0 54 375-434 4-60 (313)
5 2w47_A Lipolytic enzyme, G-D-S 92.8 3.8 0.00013 34.4 14.6 93 87-183 39-132 (144)
6 2w47_A Lipolytic enzyme, G-D-S 92.5 2 6.7E-05 36.2 12.3 90 273-369 40-133 (144)
7 2vzp_A Aocbm35, EXO-beta-D-glu 92.3 1.5 5.2E-05 36.0 11.2 85 273-364 39-127 (127)
8 2w87_A Esterase D, XYL-CBM35; 90.8 2 6.7E-05 36.1 10.4 87 273-366 39-130 (139)
9 2w3j_A Carbohydrate binding mo 89.1 8.9 0.0003 32.3 13.3 92 87-183 38-130 (145)
10 2vzp_A Aocbm35, EXO-beta-D-glu 89.1 8 0.00027 31.4 13.5 90 86-179 37-127 (127)
11 4eco_A Uncharacterized protein 87.8 0.51 1.7E-05 49.9 5.5 50 374-434 27-91 (636)
12 4ecn_A Leucine-rich repeat pro 85.7 1 3.4E-05 49.8 6.5 50 373-434 265-333 (876)
13 2wz8_A Cellulosome protein doc 84.2 14 0.00046 31.6 11.8 94 273-368 47-150 (156)
14 3rgz_A Protein brassinosteroid 84.1 0.86 2.9E-05 49.2 5.0 48 375-434 10-60 (768)
15 2w87_A Esterase D, XYL-CBM35; 83.5 12 0.00041 31.2 10.9 91 87-181 38-130 (139)
16 2wz8_A Cellulosome protein doc 76.9 21 0.0007 30.4 10.4 93 89-183 48-150 (156)
17 2o14_A Hypothetical protein YX 66.3 55 0.0019 31.8 12.1 80 89-184 77-157 (375)
18 2cdp_A Beta-agarase 1; carbohy 22.4 3.4E+02 0.012 22.6 11.7 90 86-181 65-160 (160)
19 2o14_A Hypothetical protein YX 21.1 2.6E+02 0.0089 26.8 8.1 79 273-369 76-157 (375)
20 4d8m_A Pesticidal crystal prot 20.4 2.7E+02 0.0092 28.9 8.2 88 90-181 488-584 (587)
No 1
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.95 E-value=4.6e-28 Score=219.23 Aligned_cols=153 Identities=22% Similarity=0.242 Sum_probs=116.4
Q ss_pred eeeecccCCCCCCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCeeEeeccceeecCCCCCCCCcHHHHHhhhccCCceEEE
Q 013887 199 VNYGRLTSGSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYN 278 (434)
Q Consensus 199 ~~~~Rin~G~~~~~~~~~y~~D~~dR~W~~d~~~~~~~~~~~~~~ist~~~i~~~~~~~~~~P~~VyqTAr~~~~~lt~~ 278 (434)
++++|||||+.. + .|..+|.|.+|..+...+... .......+. ..+.+|+.||||||.+..+++|.
T Consensus 5 ~~~~~INcGg~~----~---~d~~gr~w~~D~~~~~~g~~~---~~~~~~~~~----~~~~~~~~lY~TaR~~~~~~tY~ 70 (174)
T 2jwp_A 5 KVIWAVNAGGES----H---VDVHGIHYRKDPLEGRVGRAS---DYGMKLPIL----RSNPEDQVLYQTERYNEDSFGYD 70 (174)
T ss_dssp HEEEEEEETSSS----E---EETTTEEECSSCSSTTCCCCC---CCCTTSCCS----SSCHHHHHTTTCCCCCCSCEEEE
T ss_pred cEEEEEECCCCC----c---cCCCCCEEcCCcCcccCCccc---ccccceEec----ccCCCCchhhhhhccCCCCeEEE
Confidence 567999999864 2 256899999998764211111 001111111 11236889999999987789999
Q ss_pred EEeCCCCcEEEEEEEEeeecccCCCceEEEEEEECCE-EccccceecccCCcceEEEEEEEEe------------cCCce
Q 013887 279 LAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDK-NVTRVDIFNSVGSFAAYSWHYVAKN------------LSSTE 345 (434)
Q Consensus 279 ~~v~~~~~Y~v~LhFaEi~~~~~~~~~R~FdV~iNg~-~~~~~di~~~~g~~~~~~~~~~v~~------------~~~g~ 345 (434)
|+++++|.|+|||||||+.. .+.++|+|||+|||+ ++++||+..++|+.+|++++|.+.. ..+|+
T Consensus 71 f~v~~~G~Y~VrLhF~ei~~--~~~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~ 148 (174)
T 2jwp_A 71 IPIKEEGEYVLVLKFAEVYF--AQSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGK 148 (174)
T ss_dssp EECCSCEEEEEEEEEECCSC--CCSSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSE
T ss_pred EEeCCCeEEEEEEEEecccc--CCCCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCe
Confidence 99998899999999999986 458999999999999 6799999988877778888876642 35678
Q ss_pred EEEEEeecCC-CceeeEEEEEEe
Q 013887 346 LTVKLVPVVG-AALISGLENYAL 367 (434)
Q Consensus 346 l~i~~~~~~~-sp~lNAiEI~~~ 367 (434)
|+|+|.|... .|+||||||++.
T Consensus 149 L~I~f~p~~~~~a~inaIEI~~~ 171 (174)
T 2jwp_A 149 LSVEFVKGYYDNPKVCALFIMKG 171 (174)
T ss_dssp EEEEEECSSSCSSSEEEEEEESS
T ss_pred EEEEEeccCCCCcEEEEEEEEeC
Confidence 9999998644 499999999975
No 2
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.89 E-value=4e-23 Score=186.78 Aligned_cols=147 Identities=17% Similarity=0.111 Sum_probs=111.1
Q ss_pred cEEEccCCCCCccCCCCCeEeeCCCCccCCCccc------ccCCCCCCCcccceeeeeCCCCCCCceEEEeeCCCceEEE
Q 013887 31 SYRIDCGSATSTTDPFNTTWQADDRYYTSGATSI------VSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYI 104 (434)
Q Consensus 31 ~isIdCG~~~~~~D~~g~~w~~Dd~~~~~G~~~~------i~~~~~~~~~~y~t~R~Fp~~~g~r~cYtlpv~~~g~Ylv 104 (434)
.++||||++. .+|..||+|.+|+.+...|.... +......+..+|+|+|+||. ..+|.||+.++|+|+|
T Consensus 7 ~~~INcGg~~-~~d~~gr~w~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~~----~~tY~f~v~~~G~Y~V 81 (174)
T 2jwp_A 7 IWAVNAGGES-HVDVHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNED----SFGYDIPIKEEGEYVL 81 (174)
T ss_dssp EEEEEETSSS-EEETTTEEECSSCSSTTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCCS----CEEEEEECCSCEEEEE
T ss_pred EEEEECCCCC-ccCCCCCEEcCCcCcccCCcccccccceEecccCCCCchhhhhhccCCC----CeEEEEEeCCCeEEEE
Confidence 5899999975 45778999999765432332210 11111123568999999985 4899999987899999
Q ss_pred EEEeecCCCCCCCCCCcEEEEECCEEEEecCCCCCcccCCCceEEEEEEEe-------------cCCeEEEEEeecCCCC
Q 013887 105 RTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFV-------------KDGELDLCFYSFATDP 171 (434)
Q Consensus 105 Rl~F~ygnyd~~~~~~~Fdv~lg~~~~l~~~~~~~~~~~~~~~~~E~i~~~-------------~~~~l~vclv~~~~~~ 171 (434)
||||..-.+... ..+.|||++++.+++++|+++.+++...+.++|+.+.+ .++.|.|+|.|.....
T Consensus 82 rLhF~ei~~~~~-~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~~~ 160 (174)
T 2jwp_A 82 VLKFAEVYFAQS-QQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDN 160 (174)
T ss_dssp EEEEECCSCCCS-SSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECSSSCS
T ss_pred EEEEeccccCCC-CCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEEEEeccCCCC
Confidence 999997766553 47999999999999999998766544456778886653 5778999999865678
Q ss_pred ceeEeEEEEEcC
Q 013887 172 PVIASLEVQQID 183 (434)
Q Consensus 172 pFIs~iElr~l~ 183 (434)
||||||||++.+
T Consensus 161 a~inaIEI~~~~ 172 (174)
T 2jwp_A 161 PKVCALFIMKGT 172 (174)
T ss_dssp SSEEEEEEESSC
T ss_pred cEEEEEEEEeCc
Confidence 999999999753
No 3
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=93.27 E-value=1.1 Score=38.12 Aligned_cols=89 Identities=18% Similarity=0.192 Sum_probs=55.8
Q ss_pred CceEEEEEeCCCCcEEEEEEEEeeecccCCCceEEEEEEECCEEccccceecccCC-cceEEEEEEEEecCCceEEEEEe
Q 013887 273 GAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGS-FAAYSWHYVAKNLSSTELTVKLV 351 (434)
Q Consensus 273 ~~lt~~~~v~~~~~Y~v~LhFaEi~~~~~~~~~R~FdV~iNg~~~~~~di~~~~g~-~~~~~~~~~v~~~~~g~l~i~~~ 351 (434)
..++|.+.++..|.|.+.+.++-- ....|.++|+|||.....+.+- ..|. ..-......+. ...|.-+|+|.
T Consensus 39 ~~v~~~V~v~~aG~Y~l~~ryang-----~~~~r~~~l~VNG~~~~~v~~p-~Tg~W~~w~t~~~~v~-L~aG~ntI~l~ 111 (145)
T 2w3j_A 39 ASIVWSLSAASAKTYTAQIRFGNG-----GTSARRATVVVNDSQIKTLDFP-TNSNWTQWQTVNVDIP-LKAGTNSIKLV 111 (145)
T ss_dssp CEEEEEEEESSCEEEEEEEEEECC-----SSSCCCEEEEETTEEEEEECCC-CCSCTTSCEEEEEEEE-ECSEEEEEEEE
T ss_pred CEEEEEEECCCCeEEEEEEEEECC-----CCCCeEEEEEECCeEeeEEEec-CCCCCCeeEEEEEEEE-ECCCceEEEEE
Confidence 468999988888999999999831 2346999999999854333322 2232 11111112222 45666677777
Q ss_pred ecC--CCceeeEEEEEEec
Q 013887 352 PVV--GAALISGLENYALV 368 (434)
Q Consensus 352 ~~~--~sp~lNAiEI~~~~ 368 (434)
... +.|-|+-|+|-+..
T Consensus 112 ~~~~~g~~niD~i~v~~~~ 130 (145)
T 2w3j_A 112 AETADGLANIDSIRVTGNG 130 (145)
T ss_dssp ECSTTCCCEEEEEEECSTT
T ss_pred EecCcCCEEEEEEEEEcCC
Confidence 643 34899999885543
No 4
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=93.01 E-value=0.12 Score=49.35 Aligned_cols=54 Identities=22% Similarity=0.489 Sum_probs=39.3
Q ss_pred ChHHHHHHHHHHHHcCCCC-CCCCC--CCCcCCCCCCCCceeeeCCCCCCCcceEEEEecCCC
Q 013887 375 VPEQVIAMRALKESLRVPD-RMGWN--GDPCAPTNWDAWEGITCHPNKDETAVVISQMNSSLW 434 (434)
Q Consensus 375 ~~~Dv~ai~~ik~~~~~~~-~~~W~--GDPC~P~~~~~W~g~~C~~~~~~~~~~i~~l~LS~~ 434 (434)
.++|..|+.++|+....+. ..+|. .|||.. .|.|+.|.... ...+|+.|+|++|
T Consensus 4 ~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~----~w~gv~C~~~~--~~~~l~~L~L~~~ 60 (313)
T 1ogq_A 4 NPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNR----TWLGVLCDTDT--QTYRVNNLDLSGL 60 (313)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTT----CSTTEEECCSS--SCCCEEEEEEECC
T ss_pred CHHHHHHHHHHHHhcCCcccccCCCCCCCCCcC----CCcceEeCCCC--CCceEEEEECCCC
Confidence 5789999999999986321 23785 378864 59999996321 2257889999875
No 5
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=92.83 E-value=3.8 Score=34.41 Aligned_cols=93 Identities=13% Similarity=0.097 Sum_probs=58.1
Q ss_pred CCCceEEEeeCCCceEEEEEEeecCCCCCCCCCCcEEEEECCEEEEecCCCCCcccCCCceEEEEEEEecCCeEEEEEee
Q 013887 87 GKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYS 166 (434)
Q Consensus 87 g~r~cYtlpv~~~g~YlvRl~F~ygnyd~~~~~~~Fdv~lg~~~~l~~~~~~~~~~~~~~~~~E~i~~~~~~~l~vclv~ 166 (434)
|..-.|++.+.+.|.|.|++.+.-+.. ..+.++|++++..+......-.+..-.......+-+..+.|.=.|.|..
T Consensus 39 g~~v~~~V~v~~aG~Y~l~~ryan~~~----~~~~~~l~VNG~~~~~~v~~p~Tg~w~~w~~~~~~v~L~aG~ntI~l~~ 114 (144)
T 2w47_A 39 GGYIEWNVNAPSSGSYALIFRYANGTT----ANRPMRITVNGNIVKPSMDFVSTGAWTTWNEAGIVANLNQGNNVIRATA 114 (144)
T ss_dssp TCEEEEEEEESSSEEEEEEEEEECCSS----SCCCEEEEETTEEEEEEECCCCCSSTTCCEEEEEEEEECSEEEEEEEEE
T ss_pred CCEEEEEEECCCCcEEEEEEEEECCCC----CCeEEEEEECCeEeeeEEEecCCCCCCeeEEEEEEEEECCCccEEEEEE
Confidence 556789998878899999998875432 2478999999976432222111211111112233334566666677764
Q ss_pred c-CCCCceeEeEEEEEcC
Q 013887 167 F-ATDPPVIASLEVQQID 183 (434)
Q Consensus 167 ~-~~~~pFIs~iElr~l~ 183 (434)
. +.+.|.|.-|+|.+.+
T Consensus 115 ~~~~g~~niD~i~v~~~~ 132 (144)
T 2w47_A 115 IASDGGPNVDYLKVFSAN 132 (144)
T ss_dssp CSTTCCCEEEEEEEEECT
T ss_pred eCCCCCEEEeEEEEEeCC
Confidence 3 3467999999998864
No 6
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=92.48 E-value=2 Score=36.21 Aligned_cols=90 Identities=20% Similarity=0.296 Sum_probs=57.2
Q ss_pred CceEEEEEeCCCCcEEEEEEEEeeecccCCCceEEEEEEECCEE-ccccceecccCC-cceEEEEEEEEecCCceEEEEE
Q 013887 273 GAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKN-VTRVDIFNSVGS-FAAYSWHYVAKNLSSTELTVKL 350 (434)
Q Consensus 273 ~~lt~~~~v~~~~~Y~v~LhFaEi~~~~~~~~~R~FdV~iNg~~-~~~~di~~~~g~-~~~~~~~~~v~~~~~g~l~i~~ 350 (434)
..++|.+.++..|.|.+.+.++-- ....|.++|+|||.. ...+.+- ..+. ..-......+. ...|.-+|+|
T Consensus 40 ~~v~~~V~v~~aG~Y~l~~ryan~-----~~~~~~~~l~VNG~~~~~~v~~p-~Tg~w~~w~~~~~~v~-L~aG~ntI~l 112 (144)
T 2w47_A 40 GYIEWNVNAPSSGSYALIFRYANG-----TTANRPMRITVNGNIVKPSMDFV-STGAWTTWNEAGIVAN-LNQGNNVIRA 112 (144)
T ss_dssp CEEEEEEEESSSEEEEEEEEEECC-----SSSCCCEEEEETTEEEEEEECCC-CCSSTTCCEEEEEEEE-ECSEEEEEEE
T ss_pred CEEEEEEECCCCcEEEEEEEEECC-----CCCCeEEEEEECCeEeeeEEEec-CCCCCCeeEEEEEEEE-ECCCccEEEE
Confidence 468999988888999999999842 224699999999984 3333332 2232 11111111222 4566667777
Q ss_pred eecC--CCceeeEEEEEEecC
Q 013887 351 VPVV--GAALISGLENYALVP 369 (434)
Q Consensus 351 ~~~~--~sp~lNAiEI~~~~~ 369 (434)
.... +.|-|+-|+|.+...
T Consensus 113 ~~~~~~g~~niD~i~v~~~~~ 133 (144)
T 2w47_A 113 TAIASDGGPNVDYLKVFSANA 133 (144)
T ss_dssp EECSTTCCCEEEEEEEEECTT
T ss_pred EEeCCCCCEEEeEEEEEeCCC
Confidence 7532 349999999987654
No 7
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=92.31 E-value=1.5 Score=35.97 Aligned_cols=85 Identities=18% Similarity=0.184 Sum_probs=52.6
Q ss_pred CceEEEEEeCCCCcEEEEEEEEeeecccCCCceEEEEEEECCEEc-cccceecccCC-cceEEEEEEEEecCCceEEEEE
Q 013887 273 GAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNV-TRVDIFNSVGS-FAAYSWHYVAKNLSSTELTVKL 350 (434)
Q Consensus 273 ~~lt~~~~v~~~~~Y~v~LhFaEi~~~~~~~~~R~FdV~iNg~~~-~~~di~~~~g~-~~~~~~~~~v~~~~~g~l~i~~ 350 (434)
..++|.+.++..|.|.+.++++--. ...|.++|+|||... ..+.+- ..+. ..-......+. ...|.-+|+|
T Consensus 39 ~~v~~~V~v~~aG~Y~l~~rya~~~-----~~~~~~~l~VnG~~~~~~v~~p-~tg~W~~w~~~~~~v~-L~aG~ntI~l 111 (127)
T 2vzp_A 39 SSVEWTVTVPSAGTYDVVVRYANGT-----TTSRPLDFSVNGSISASGVAFG-STGTWPAWTTKTVRVT-LAAGVNKIKA 111 (127)
T ss_dssp CEEEEEEEESSSEEEEEEEEEECCS-----SSCCCEEEEETTEEEEEEECCC-CCSSTTCCEEEEEEEE-ECSEEEEEEE
T ss_pred CEEEEEEEcCCCCEEEEEEEEEcCC-----CCCeEEEEEECCEEeeeEEEec-CCCCCCceEEEEEEEE-ECCCceEEEE
Confidence 4689999988889999999998521 246899999999853 223321 2232 11111112222 4566677777
Q ss_pred eecC--CCceeeEEEE
Q 013887 351 VPVV--GAALISGLEN 364 (434)
Q Consensus 351 ~~~~--~sp~lNAiEI 364 (434)
.... ..|-|+-|+|
T Consensus 112 ~~~~~~~~~niD~i~v 127 (127)
T 2vzp_A 112 VATTANGGPNVDKITL 127 (127)
T ss_dssp EECSTTCCCEEEEEEC
T ss_pred EEeCCCCCeEEEEEEC
Confidence 7643 2377887764
No 8
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=90.84 E-value=2 Score=36.12 Aligned_cols=87 Identities=13% Similarity=0.120 Sum_probs=54.5
Q ss_pred CceEEEEEeCCCCcEEEEEEEEeeecccCCCceEEEEEEECCEEc--cccceecccCCc-ceEEEEEEEEecCCceEEEE
Q 013887 273 GAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNV--TRVDIFNSVGSF-AAYSWHYVAKNLSSTELTVK 349 (434)
Q Consensus 273 ~~lt~~~~v~~~~~Y~v~LhFaEi~~~~~~~~~R~FdV~iNg~~~--~~~di~~~~g~~-~~~~~~~~v~~~~~g~l~i~ 349 (434)
..++|...++..|.|.+.+.++-- ....|..+|+|||... ..+.+- ..|.. .-......+. ...|.-+|+
T Consensus 39 ~~v~~~V~v~~aG~Y~l~~ryang-----~~~~r~~~l~VNG~~~g~~~v~~p-~Tg~W~~w~t~~~~v~-L~aG~ntI~ 111 (139)
T 2w87_A 39 AAVVWAIDATSSGRRTLTIRYANG-----GTANRNGSLVINGGSNGNYTVSLP-TTGAWTTWQTATIDVD-LVQGNNIVQ 111 (139)
T ss_dssp CEEEEEEEESSCEEEEEEEEEECC-----SSSCCCEEEEETTTTTCEEEECCC-CCSSTTCCEEEEEEEE-ECSEEEEEE
T ss_pred CEEEEEEECCCCcEEEEEEEEECC-----CCCCceEEEEECCEEcceeEEEec-CCCCCCccEEEEEEEE-ECCCceEEE
Confidence 468999888888999999999842 1236999999999743 333332 22321 1111112222 456666777
Q ss_pred EeecCC--CceeeEEEEEE
Q 013887 350 LVPVVG--AALISGLENYA 366 (434)
Q Consensus 350 ~~~~~~--sp~lNAiEI~~ 366 (434)
|....+ .|-|+-|+|-.
T Consensus 112 l~~~~~~g~~niD~i~v~~ 130 (139)
T 2w87_A 112 LSATTAEGLPNIDSLSVVG 130 (139)
T ss_dssp EEESSTTCCCEEEEEEEES
T ss_pred EEEcCCCCCEEEEEEEEec
Confidence 776543 48999998854
No 9
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=89.13 E-value=8.9 Score=32.25 Aligned_cols=92 Identities=11% Similarity=-0.021 Sum_probs=56.6
Q ss_pred CCCceEEEeeCCCceEEEEEEeecCCCCCCCCCCcEEEEECCEEEEecCCCCCcccCCCceEEEEEEEecCCeEEEEEee
Q 013887 87 GKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYS 166 (434)
Q Consensus 87 g~r~cYtlpv~~~g~YlvRl~F~ygnyd~~~~~~~Fdv~lg~~~~l~~~~~~~~~~~~~~~~~E~i~~~~~~~l~vclv~ 166 (434)
|..-.|++.+.+.|.|.|++.+.-|.. ..+.++|++++...-. ...-.+..-.......+-+..+.+.=.|.|..
T Consensus 38 G~~v~~~V~v~~aG~Y~l~~ryang~~----~~r~~~l~VNG~~~~~-v~~p~Tg~W~~w~t~~~~v~L~aG~ntI~l~~ 112 (145)
T 2w3j_A 38 GASIVWSLSAASAKTYTAQIRFGNGGT----SARRATVVVNDSQIKT-LDFPTNSNWTQWQTVNVDIPLKAGTNSIKLVA 112 (145)
T ss_dssp TCEEEEEEEESSCEEEEEEEEEECCSS----SCCCEEEEETTEEEEE-ECCCCCSCTTSCEEEEEEEEECSEEEEEEEEE
T ss_pred CCEEEEEEECCCCeEEEEEEEEECCCC----CCeEEEEEECCeEeeE-EEecCCCCCCeeEEEEEEEEECCCceEEEEEE
Confidence 556688888878899999998874332 3578999999976522 11111111011111223334566666677765
Q ss_pred c-CCCCceeEeEEEEEcC
Q 013887 167 F-ATDPPVIASLEVQQID 183 (434)
Q Consensus 167 ~-~~~~pFIs~iElr~l~ 183 (434)
. +.+.|-|.-|+|.+.+
T Consensus 113 ~~~~g~~niD~i~v~~~~ 130 (145)
T 2w3j_A 113 ETADGLANIDSIRVTGNG 130 (145)
T ss_dssp CSTTCCCEEEEEEECSTT
T ss_pred ecCcCCEEEEEEEEEcCC
Confidence 4 3567999999997654
No 10
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=89.11 E-value=8 Score=31.44 Aligned_cols=90 Identities=14% Similarity=0.106 Sum_probs=54.3
Q ss_pred CCCCceEEEeeCCCceEEEEEEeecCCCCCCCCCCcEEEEECCEEEEecCCCCCcccCCCceEEEEEEEecCCeEEEEEe
Q 013887 86 SGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFY 165 (434)
Q Consensus 86 ~g~r~cYtlpv~~~g~YlvRl~F~ygnyd~~~~~~~Fdv~lg~~~~l~~~~~~~~~~~~~~~~~E~i~~~~~~~l~vclv 165 (434)
.|..-.|++.+.+.|.|.|++++.-+. + ..+.++|++++.........-.+..-.......+.+..+.+.=.|.|.
T Consensus 37 ~g~~v~~~V~v~~aG~Y~l~~rya~~~--~--~~~~~~l~VnG~~~~~~v~~p~tg~W~~w~~~~~~v~L~aG~ntI~l~ 112 (127)
T 2vzp_A 37 AGSSVEWTVTVPSAGTYDVVVRYANGT--T--TSRPLDFSVNGSISASGVAFGSTGTWPAWTTKTVRVTLAAGVNKIKAV 112 (127)
T ss_dssp TTCEEEEEEEESSSEEEEEEEEEECCS--S--SCCCEEEEETTEEEEEEECCCCCSSTTCCEEEEEEEEECSEEEEEEEE
T ss_pred CCCEEEEEEEcCCCCEEEEEEEEEcCC--C--CCeEEEEEECCEEeeeEEEecCCCCCCceEEEEEEEEECCCceEEEEE
Confidence 366678999887889999999988553 1 357899999997653312211121101111122333456666666666
Q ss_pred ec-CCCCceeEeEEE
Q 013887 166 SF-ATDPPVIASLEV 179 (434)
Q Consensus 166 ~~-~~~~pFIs~iEl 179 (434)
.. +.+.|-|.-|+|
T Consensus 113 ~~~~~~~~niD~i~v 127 (127)
T 2vzp_A 113 ATTANGGPNVDKITL 127 (127)
T ss_dssp ECSTTCCCEEEEEEC
T ss_pred EeCCCCCeEEEEEEC
Confidence 53 346688877764
No 11
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=87.84 E-value=0.51 Score=49.88 Aligned_cols=50 Identities=14% Similarity=0.324 Sum_probs=34.7
Q ss_pred CChHHHHHHHHHHHHcCCCCCC----------CCCC--CCcCCCCCCCC---ceeeeCCCCCCCcceEEEEecCCC
Q 013887 374 TVPEQVIAMRALKESLRVPDRM----------GWNG--DPCAPTNWDAW---EGITCHPNKDETAVVISQMNSSLW 434 (434)
Q Consensus 374 T~~~Dv~ai~~ik~~~~~~~~~----------~W~G--DPC~P~~~~~W---~g~~C~~~~~~~~~~i~~l~LS~~ 434 (434)
.+.+|+.|+.+|++...-..+. +|.. |+| .| .||.|+.. .+|+.|+|++|
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c------~w~~~~GV~C~~~-----~~V~~L~L~~~ 91 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD------MWGAQPGVSLNSN-----GRVTGLSLEGF 91 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG------GTTCCTTEEECTT-----CCEEEEECTTS
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc------cccCCCCeEEcCC-----CCEEEEEecCc
Confidence 4567999999999987643211 3532 333 37 99999642 58899999875
No 12
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=85.70 E-value=1 Score=49.76 Aligned_cols=50 Identities=14% Similarity=0.238 Sum_probs=37.1
Q ss_pred CCChHHHHHHHHHHHHcCCCCCCCCCC-------CCcCCCCCCCC------------ceeeeCCCCCCCcceEEEEecCC
Q 013887 373 STVPEQVIAMRALKESLRVPDRMGWNG-------DPCAPTNWDAW------------EGITCHPNKDETAVVISQMNSSL 433 (434)
Q Consensus 373 ~T~~~Dv~ai~~ik~~~~~~~~~~W~G-------DPC~P~~~~~W------------~g~~C~~~~~~~~~~i~~l~LS~ 433 (434)
.+..+|+.|+.+||+....+ +|.+ |||. -.| .|+.|+. ..+|+.|+|++
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~----C~W~~~~~~~~w~~~~GV~C~~-----~~~V~~L~Ls~ 332 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHS----LNWNFNKELDMWGDQPGVDLDN-----NGRVTGLSLAG 332 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCC----CSCCCSSCGGGTTCCTTEEECT-----TSCEEEEECTT
T ss_pred ccchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCc----cccccccccccccCcCceEecC-----CCCEEEEECcc
Confidence 34567999999999998753 7853 4521 138 9999964 26899999998
Q ss_pred C
Q 013887 434 W 434 (434)
Q Consensus 434 ~ 434 (434)
|
T Consensus 333 ~ 333 (876)
T 4ecn_A 333 F 333 (876)
T ss_dssp T
T ss_pred C
Confidence 6
No 13
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=84.22 E-value=14 Score=31.58 Aligned_cols=94 Identities=18% Similarity=0.092 Sum_probs=55.9
Q ss_pred CceEEE-EEeCCCCcEEEEEEEEeeecc-----cCCCceEEEEEEECCEEccccceecccCC-cceEEEEEEEEecCCce
Q 013887 273 GAIQYN-LAVDAKLDYLIWFHFAEIDSS-----VTKAGQRVFDILVNDKNVTRVDIFNSVGS-FAAYSWHYVAKNLSSTE 345 (434)
Q Consensus 273 ~~lt~~-~~v~~~~~Y~v~LhFaEi~~~-----~~~~~~R~FdV~iNg~~~~~~di~~~~g~-~~~~~~~~~v~~~~~g~ 345 (434)
..++|. ..++..|.|.|.++|+.-... ......|...|+|||.....+..- ..+. ...-.....+. ...|.
T Consensus 47 ~~vtf~~V~~~~aG~Y~l~irYang~~~~~~~y~~~~~~r~~~v~VNG~~~~~v~fp-~Tg~W~~~~~~tv~V~-L~aG~ 124 (156)
T 2wz8_A 47 NYLQFNNVYVPQAGTYRMVVQFANAEVFGQHSYNNNVVDRYCSISVNGGPEKGHYFF-NTRGWNTYRTDIIDVY-LNAGN 124 (156)
T ss_dssp SCEEEEEEEESSCEEEEEEEEEECCCBC-------CBCCEEEEEEETTCCCEEEEEC-CCSSTTCCEEEEEEEE-ECSEE
T ss_pred CEEEEEEEecCCCcEEEEEEEEECCCcccccccCCccCcceEEEEECCceeeEEEeC-CCCCCCcceEEEEEEE-ECCCc
Confidence 468898 888888999999999864310 001247999999999742222221 2232 11111112222 45666
Q ss_pred EEEEEeec--CC-CceeeEEEEEEec
Q 013887 346 LTVKLVPV--VG-AALISGLENYALV 368 (434)
Q Consensus 346 l~i~~~~~--~~-sp~lNAiEI~~~~ 368 (434)
=+|+|... .+ .|-|=.|+|.+..
T Consensus 125 NtI~~~~~~~~~~~pdiD~i~v~~~~ 150 (156)
T 2wz8_A 125 NTIRFYNGTSGSYAPNIDKIAIAALE 150 (156)
T ss_dssp EEEEEECCSTTCBCCEEEEEEEEC--
T ss_pred eEEEEEecCCCCCCcEEEEEEEeccc
Confidence 67888775 22 2888888887643
No 14
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=84.07 E-value=0.86 Score=49.21 Aligned_cols=48 Identities=19% Similarity=0.481 Sum_probs=36.1
Q ss_pred ChHHHHHHHHHHHHcCCC-CCCCCC--CCCcCCCCCCCCceeeeCCCCCCCcceEEEEecCCC
Q 013887 375 VPEQVIAMRALKESLRVP-DRMGWN--GDPCAPTNWDAWEGITCHPNKDETAVVISQMNSSLW 434 (434)
Q Consensus 375 ~~~Dv~ai~~ik~~~~~~-~~~~W~--GDPC~P~~~~~W~g~~C~~~~~~~~~~i~~l~LS~~ 434 (434)
..+|..|+.++|+.+..+ ...+|. .|+|. |+||.|+ . .+|+.|+|+++
T Consensus 10 ~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~------w~gv~C~-~-----~~v~~L~L~~~ 60 (768)
T 3rgz_A 10 LYREIHQLISFKDVLPDKNLLPDWSSNKNPCT------FDGVTCR-D-----DKVTSIDLSSK 60 (768)
T ss_dssp HHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGG------STTEEEE-T-----TEEEEEECTTS
T ss_pred CHHHHHHHHHHHhhCCCcccccCCCCCCCCcC------CcceEEC-C-----CcEEEEECCCC
Confidence 467889999999987532 233795 37774 9999996 1 58999999874
No 15
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=83.47 E-value=12 Score=31.17 Aligned_cols=91 Identities=14% Similarity=0.014 Sum_probs=54.1
Q ss_pred CCCceEEEeeCCCceEEEEEEeecCCCCCCCCCCcEEEEECCEEE-EecCCCCCcccCCCceEEEEEEEecCCeEEEEEe
Q 013887 87 GKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLV-FSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFY 165 (434)
Q Consensus 87 g~r~cYtlpv~~~g~YlvRl~F~ygnyd~~~~~~~Fdv~lg~~~~-l~~~~~~~~~~~~~~~~~E~i~~~~~~~l~vclv 165 (434)
|..-.|++.+.+.|.|.|++++.-+. + ..+..+|++++... ......-.+..-......++-+..+.+.=.|.|.
T Consensus 38 g~~v~~~V~v~~aG~Y~l~~ryang~--~--~~r~~~l~VNG~~~g~~~v~~p~Tg~W~~w~t~~~~v~L~aG~ntI~l~ 113 (139)
T 2w87_A 38 GAAVVWAIDATSSGRRTLTIRYANGG--T--ANRNGSLVINGGSNGNYTVSLPTTGAWTTWQTATIDVDLVQGNNIVQLS 113 (139)
T ss_dssp TCEEEEEEEESSCEEEEEEEEEECCS--S--SCCCEEEEETTTTTCEEEECCCCCSSTTCCEEEEEEEEECSEEEEEEEE
T ss_pred CCEEEEEEECCCCcEEEEEEEEECCC--C--CCceEEEEECCEEcceeEEEecCCCCCCccEEEEEEEEECCCceEEEEE
Confidence 55568888887789999999887543 1 24679999987532 0111111111001111223333456666667776
Q ss_pred ecC-CCCceeEeEEEEE
Q 013887 166 SFA-TDPPVIASLEVQQ 181 (434)
Q Consensus 166 ~~~-~~~pFIs~iElr~ 181 (434)
... .+.|-|.-|+|.+
T Consensus 114 ~~~~~g~~niD~i~v~~ 130 (139)
T 2w87_A 114 ATTAEGLPNIDSLSVVG 130 (139)
T ss_dssp ESSTTCCCEEEEEEEES
T ss_pred EcCCCCCEEEEEEEEec
Confidence 543 4679999999875
No 16
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=76.90 E-value=21 Score=30.42 Aligned_cols=93 Identities=11% Similarity=0.082 Sum_probs=54.2
Q ss_pred CceEE-EeeCCCceEEEEEEeecCCC------CCCCCCCcEEEEECCEEEEe-cCCCCCcccCCCceEEEEEEEecCCeE
Q 013887 89 KNCYI-IPNLPPGRYYIRTFTVYDNY------DGKSHSPSFDVSVEGTLVFS-WRSPWPEGLARDGAYSDLFAFVKDGEL 160 (434)
Q Consensus 89 r~cYt-lpv~~~g~YlvRl~F~ygny------d~~~~~~~Fdv~lg~~~~l~-~~~~~~~~~~~~~~~~E~i~~~~~~~l 160 (434)
.-.++ +.+.+.|.|.|++.|.-|.. ......+..+|.+++...-. .|. .+..-.......+.+..+.+.=
T Consensus 48 ~vtf~~V~~~~aG~Y~l~irYang~~~~~~~y~~~~~~r~~~v~VNG~~~~~v~fp--~Tg~W~~~~~~tv~V~L~aG~N 125 (156)
T 2wz8_A 48 YLQFNNVYVPQAGTYRMVVQFANAEVFGQHSYNNNVVDRYCSISVNGGPEKGHYFF--NTRGWNTYRTDIIDVYLNAGNN 125 (156)
T ss_dssp CEEEEEEEESSCEEEEEEEEEECCCBC-------CBCCEEEEEEETTCCCEEEEEC--CCSSTTCCEEEEEEEEECSEEE
T ss_pred EEEEEEEecCCCcEEEEEEEEECCCcccccccCCccCcceEEEEECCceeeEEEeC--CCCCCCcceEEEEEEEECCCce
Confidence 34666 77767899999999875531 11113578999998743111 111 1110011112233445677787
Q ss_pred EEEEeec--CCCCceeEeEEEEEcC
Q 013887 161 DLCFYSF--ATDPPVIASLEVQQID 183 (434)
Q Consensus 161 ~vclv~~--~~~~pFIs~iElr~l~ 183 (434)
.|.|.+. ....|-|-.|+|.++.
T Consensus 126 tI~~~~~~~~~~~pdiD~i~v~~~~ 150 (156)
T 2wz8_A 126 TIRFYNGTSGSYAPNIDKIAIAALE 150 (156)
T ss_dssp EEEEECCSTTCBCCEEEEEEEEC--
T ss_pred EEEEEecCCCCCCcEEEEEEEeccc
Confidence 8888876 3446899999987654
No 17
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=66.27 E-value=55 Score=31.77 Aligned_cols=80 Identities=20% Similarity=0.287 Sum_probs=52.6
Q ss_pred CceEEEeeCCCceEEEEEEeecCCCCCCCCCCcEEEEECCEEEEecCCCCCcccCCCceEEEEEEEecCCeEEEEEeecC
Q 013887 89 KNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFA 168 (434)
Q Consensus 89 r~cYtlpv~~~g~YlvRl~F~ygnyd~~~~~~~Fdv~lg~~~~l~~~~~~~~~~~~~~~~~E~i~~~~~~~l~vclv~~~ 168 (434)
.+.+.+.+ ++|.|.|.+.+--+ ..=.|...+...+. .. .......++.+.+.++.+.+.+....
T Consensus 77 ~~~f~v~~-~~g~Y~v~v~~g~~--------~~~~v~~e~~~~~~-----~~--~g~~~~~~~~v~~~~g~~~l~~~~~~ 140 (375)
T 2o14_A 77 NNTFNVDL-PNGLYEVKVTLGNT--------ARASVAAEGVFQVI-----NM--TGDGAEDTFQIPVTDGQLNLLVTEGK 140 (375)
T ss_dssp SCCEEEEC-CSEEEEEEEEESSC--------SEEEEEETTEEEEE-----EE--ESTTCEEEEEEEECSSEEEEEEEESS
T ss_pred ceEEEEEc-CCCceEEEEEecCC--------cceEEEEcceEEEE-----ec--CCCcEEEEEEEEeeCCeEEEeeeecc
Confidence 34566666 79999999988633 23345555554333 11 12334456777888999999987443
Q ss_pred C-CCceeEeEEEEEcCC
Q 013887 169 T-DPPVIASLEVQQIDP 184 (434)
Q Consensus 169 ~-~~pFIs~iElr~l~~ 184 (434)
. ..+++++||+.+.+.
T Consensus 141 ~g~~~~l~~i~v~~~~~ 157 (375)
T 2o14_A 141 AGTAFTLSALKIKKLSD 157 (375)
T ss_dssp TTSCCEEEEEEEEEEES
T ss_pred CCCCcccceEEEeccCC
Confidence 3 358999999998754
No 18
>2cdp_A Beta-agarase 1; carbohydrate-binding module, hydrolase; HET: GAL AAL; 1.59A {Saccharophagus degradans} PDB: 2cdo_A*
Probab=22.36 E-value=3.4e+02 Score=22.59 Aligned_cols=90 Identities=12% Similarity=0.048 Sum_probs=49.7
Q ss_pred CCCCceEEEeeCCCceEEEEEEeecCCCCCCCCCCcEEEEECCE---EEEecCCCCCcccCCCceEEEE-EEEecCCeEE
Q 013887 86 SGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGT---LVFSWRSPWPEGLARDGAYSDL-FAFVKDGELD 161 (434)
Q Consensus 86 ~g~r~cYtlpv~~~g~YlvRl~F~ygnyd~~~~~~~Fdv~lg~~---~~l~~~~~~~~~~~~~~~~~E~-i~~~~~~~l~ 161 (434)
.|.--+|++.+.+.|.|-|.+....+. .+ ..+.|.+++. ..+....+-.+. =........ -+....+.=.
T Consensus 65 ~Gdwl~y~V~v~~aG~Y~i~~rvas~~-~g----~~i~l~vdg~~~~~~~g~~~vp~tG-W~~w~t~t~~~v~L~aG~ht 138 (160)
T 2cdp_A 65 QGDYADYTIAVAQAGNYTISYQAGSGV-TG----GSIEFLVNENGSWASKTVTAVPNQG-WDNFQPLNGGSVYLSAGTHQ 138 (160)
T ss_dssp TTCEEEEEEEESSCEEEEEEEEEEBSS-SS----CEEEEEEECSSSEEEEEEEECCBSC-TTCCEEEEEEEEEECSEEEE
T ss_pred CCCEEEEEEEcCCCcEEEEEEEEEcCC-CC----ceEEEEECCCCCceeeeEEEcCCCC-CceeEEeeeeEEEeCCCeEE
Confidence 466789999997899999999887554 22 4788888873 222211111111 011111122 2334566655
Q ss_pred EEEeecCC--CCceeEeEEEEE
Q 013887 162 LCFYSFAT--DPPVIASLEVQQ 181 (434)
Q Consensus 162 vclv~~~~--~~pFIs~iElr~ 181 (434)
|.|.-.+. ..--|+-|++.|
T Consensus 139 L~l~~~g~~~~~~Nld~~~f~p 160 (160)
T 2cdp_A 139 VRLHGAGSNNWQWNLDKFTLSN 160 (160)
T ss_dssp EEEEECSSSSBCCEEEEEEEEC
T ss_pred EEEEEECCCCCcEEEEEEEEEC
Confidence 55554432 234677777654
No 19
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=21.06 E-value=2.6e+02 Score=26.83 Aligned_cols=79 Identities=14% Similarity=0.082 Sum_probs=49.4
Q ss_pred CceEEEEEeCCCCcEEEEEEEEeeecccCCCceEEEEEEECCEE-ccccceecccCCcceEEEEEEEEecCCceEEEEEe
Q 013887 273 GAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKN-VTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLV 351 (434)
Q Consensus 273 ~~lt~~~~v~~~~~Y~v~LhFaEi~~~~~~~~~R~FdV~iNg~~-~~~~di~~~~g~~~~~~~~~~v~~~~~g~l~i~~~ 351 (434)
.+.+|..+++ +|.|.|.+.+.+-. .=.|..++.. +. ...|..+. ..+.+. ..++++++.+.
T Consensus 76 ~~~~f~v~~~-~g~Y~v~v~~g~~~---------~~~v~~e~~~~~~-----~~~g~~~~--~~~~v~-~~~g~~~l~~~ 137 (375)
T 2o14_A 76 SNNTFNVDLP-NGLYEVKVTLGNTA---------RASVAAEGVFQVI-----NMTGDGAE--DTFQIP-VTDGQLNLLVT 137 (375)
T ss_dssp CSCCEEEECC-SEEEEEEEEESSCS---------EEEEEETTEEEEE-----EEESTTCE--EEEEEE-ECSSEEEEEEE
T ss_pred CceEEEEEcC-CCceEEEEEecCCc---------ceEEEEcceEEEE-----ecCCCcEE--EEEEEE-eeCCeEEEeee
Confidence 3567788877 68999999987631 1224456652 21 12233322 234444 56889999988
Q ss_pred ecC--CCceeeEEEEEEecC
Q 013887 352 PVV--GAALISGLENYALVP 369 (434)
Q Consensus 352 ~~~--~sp~lNAiEI~~~~~ 369 (434)
+.. ..+.|++|||.....
T Consensus 138 ~~~~g~~~~l~~i~v~~~~~ 157 (375)
T 2o14_A 138 EGKAGTAFTLSALKIKKLSD 157 (375)
T ss_dssp ESSTTSCCEEEEEEEEEEES
T ss_pred eccCCCCcccceEEEeccCC
Confidence 543 348999999987643
No 20
>4d8m_A Pesticidal crystal protein CRY5BA; glycolipid binding, lipid binding protein; 2.30A {Bacillus thuringiensis}
Probab=20.42 E-value=2.7e+02 Score=28.86 Aligned_cols=88 Identities=13% Similarity=0.047 Sum_probs=51.7
Q ss_pred ceEEEeeCCCceEEEEEEeecCCCCCCCCCCcEEEEECCEEEEecCCCCCcc------c--CCCceEEEE-EEEecCCeE
Q 013887 90 NCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEG------L--ARDGAYSDL-FAFVKDGEL 160 (434)
Q Consensus 90 ~cYtlpv~~~g~YlvRl~F~ygnyd~~~~~~~Fdv~lg~~~~l~~~~~~~~~------~--~~~~~~~E~-i~~~~~~~l 160 (434)
.-|.+.....++|-||.++.-.+ |. .-.|.+..|++.+....+.-.|. . ....++++. -+..+.+.+
T Consensus 488 l~~~i~n~~~~~Y~VR~RYAS~~-d~---~~~~~~~~~~~~i~n~~~fp~T~~~~~~v~G~nG~y~~~~~~~~~~p~g~~ 563 (587)
T 4d8m_A 488 VGIQITNQTKQKYEIRCRYASKG-DN---NVYFNVDLSENPFRNSISFGSTESSVVGVQGENGKYILKSITTVEIPAGSF 563 (587)
T ss_dssp EEEEEEECSCEEEEEEEEEEESS-CE---EEEEEECCSSSCEEEEEEECCCTTCSSSEECSSSEEEEEEEEEEEECSEEE
T ss_pred EEEEEEccccceEEEEEEEecCC-Cc---eEEEEEcCCCceeeccCCCCccccccccccccCCceEeecCCceEecCCcE
Confidence 45566555778999999988532 22 12366666665442211111111 0 112233442 223468889
Q ss_pred EEEEeecCCCCceeEeEEEEE
Q 013887 161 DLCFYSFATDPPVIASLEVQQ 181 (434)
Q Consensus 161 ~vclv~~~~~~pFIs~iElr~ 181 (434)
.|.+.+.+++-=||--||++|
T Consensus 564 t~~i~nn~~~~~~iDRIEFiP 584 (587)
T 4d8m_A 564 YVHITNQGSSDLFLDRIEFVP 584 (587)
T ss_dssp EEEEEECSSSCEEEEEEEEEE
T ss_pred EEEEEecCCCCEEEEEEEeee
Confidence 999998666777999999998
Done!