Query 013890
Match_columns 434
No_of_seqs 312 out of 3071
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 19:01:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013890.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013890hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxd_A FAD-dependent pyridine 100.0 1.6E-56 5.4E-61 434.3 50.1 401 4-432 8-412 (415)
2 3ef6_A Toluene 1,2-dioxygenase 100.0 2.2E-56 7.5E-61 432.0 44.7 395 6-432 3-400 (410)
3 3fg2_P Putative rubredoxin red 100.0 1.3E-55 4.5E-60 426.2 47.2 396 6-431 2-400 (404)
4 4eqs_A Coenzyme A disulfide re 100.0 2.7E-56 9.4E-61 433.9 38.6 401 7-433 2-425 (437)
5 1q1r_A Putidaredoxin reductase 100.0 3.8E-54 1.3E-58 418.6 44.7 400 4-431 3-409 (431)
6 2gqw_A Ferredoxin reductase; f 100.0 8E-54 2.7E-58 413.6 43.1 392 4-431 6-400 (408)
7 3oc4_A Oxidoreductase, pyridin 100.0 2.8E-54 9.6E-59 422.8 38.6 404 6-433 3-427 (452)
8 3iwa_A FAD-dependent pyridine 100.0 4.9E-54 1.7E-58 423.6 36.3 414 5-433 3-446 (472)
9 3klj_A NAD(FAD)-dependent dehy 100.0 4.8E-54 1.7E-58 410.6 34.8 363 4-420 8-375 (385)
10 2bc0_A NADH oxidase; flavoprot 100.0 6.5E-54 2.2E-58 424.0 35.1 410 5-434 35-478 (490)
11 3kd9_A Coenzyme A disulfide re 100.0 2.7E-53 9.4E-58 415.6 38.0 406 5-433 3-429 (449)
12 2cdu_A NADPH oxidase; flavoenz 100.0 9.2E-54 3.1E-58 419.3 34.4 407 6-434 1-433 (452)
13 3ntd_A FAD-dependent pyridine 100.0 4.2E-52 1.4E-56 419.3 39.7 406 6-432 2-452 (565)
14 1nhp_A NADH peroxidase; oxidor 100.0 1.7E-52 5.8E-57 409.7 33.7 405 6-434 1-432 (447)
15 3ics_A Coenzyme A-disulfide re 100.0 2.3E-51 7.9E-56 415.1 41.0 407 5-432 36-468 (588)
16 3cgb_A Pyridine nucleotide-dis 100.0 7.5E-51 2.6E-55 401.0 41.2 405 5-434 36-469 (480)
17 2v3a_A Rubredoxin reductase; a 100.0 1.6E-49 5.6E-54 381.1 37.2 367 3-405 2-373 (384)
18 4b1b_A TRXR, thioredoxin reduc 100.0 1.8E-51 6.2E-56 406.1 22.2 396 5-434 42-517 (542)
19 1xhc_A NADH oxidase /nitrite r 100.0 1.9E-49 6.3E-54 377.3 33.6 351 6-410 9-361 (367)
20 2hqm_A GR, grase, glutathione 100.0 3.1E-51 1E-55 403.7 22.0 401 4-434 10-467 (479)
21 1mo9_A ORF3; nucleotide bindin 100.0 9.7E-51 3.3E-55 404.0 25.6 400 3-433 41-509 (523)
22 1m6i_A Programmed cell death p 100.0 2.3E-49 7.7E-54 391.1 34.1 408 3-423 9-484 (493)
23 1zmd_A Dihydrolipoyl dehydroge 100.0 4.3E-49 1.5E-53 388.5 33.3 399 4-433 5-458 (474)
24 2wpf_A Trypanothione reductase 100.0 1E-50 3.6E-55 400.8 21.8 398 2-434 4-471 (495)
25 3l8k_A Dihydrolipoyl dehydroge 100.0 9.2E-50 3.1E-54 392.1 27.8 400 2-433 1-449 (466)
26 3dk9_A Grase, GR, glutathione 100.0 5.9E-50 2E-54 395.1 26.5 403 3-434 18-474 (478)
27 3urh_A Dihydrolipoyl dehydroge 100.0 3.7E-50 1.3E-54 397.7 24.8 398 4-433 24-476 (491)
28 1ojt_A Surface protein; redox- 100.0 1.8E-49 6.3E-54 391.6 29.1 395 1-433 2-462 (482)
29 3lad_A Dihydrolipoamide dehydr 100.0 1.5E-49 5.3E-54 392.1 28.3 397 4-433 2-456 (476)
30 4dna_A Probable glutathione re 100.0 4.3E-49 1.5E-53 387.2 31.3 398 1-434 1-446 (463)
31 1zk7_A HGII, reductase, mercur 100.0 1.3E-49 4.6E-54 391.4 27.3 397 2-433 1-447 (467)
32 2qae_A Lipoamide, dihydrolipoy 100.0 1.1E-48 3.9E-53 384.9 33.8 396 5-433 2-453 (468)
33 1ges_A Glutathione reductase; 100.0 1.5E-48 5.3E-53 381.4 32.6 397 3-434 2-446 (450)
34 1xdi_A RV3303C-LPDA; reductase 100.0 1.4E-48 4.8E-53 386.9 32.5 396 5-433 2-456 (499)
35 3o0h_A Glutathione reductase; 100.0 1.7E-48 5.7E-53 384.9 31.6 395 4-434 25-466 (484)
36 2a8x_A Dihydrolipoyl dehydroge 100.0 1.7E-48 5.9E-53 383.2 30.4 396 5-433 3-449 (464)
37 1fec_A Trypanothione reductase 100.0 4.1E-49 1.4E-53 389.2 25.9 396 4-434 2-467 (490)
38 1v59_A Dihydrolipoamide dehydr 100.0 1.1E-48 3.8E-53 386.1 28.9 401 2-433 2-463 (478)
39 1ebd_A E3BD, dihydrolipoamide 100.0 4.2E-48 1.4E-52 379.5 32.6 395 5-433 3-446 (455)
40 2eq6_A Pyruvate dehydrogenase 100.0 5.8E-48 2E-52 378.9 33.2 392 5-433 6-446 (464)
41 1dxl_A Dihydrolipoamide dehydr 100.0 1.9E-48 6.5E-53 383.8 29.8 398 3-433 4-455 (470)
42 2r9z_A Glutathione amide reduc 100.0 7.6E-48 2.6E-52 377.7 33.9 397 2-434 1-444 (463)
43 3ic9_A Dihydrolipoamide dehydr 100.0 2.5E-49 8.5E-54 390.9 19.8 399 1-433 4-458 (492)
44 3qfa_A Thioredoxin reductase 1 100.0 1.3E-48 4.5E-53 388.0 24.6 400 4-434 31-499 (519)
45 1onf_A GR, grase, glutathione 100.0 7.2E-48 2.5E-52 381.5 29.3 403 5-433 2-491 (500)
46 3dgh_A TRXR-1, thioredoxin red 100.0 1.8E-48 6E-53 384.8 23.9 399 4-434 8-471 (483)
47 3dgz_A Thioredoxin reductase 2 100.0 1.2E-47 4.1E-52 379.2 26.6 398 4-433 5-470 (488)
48 2yqu_A 2-oxoglutarate dehydrog 100.0 1.3E-46 4.4E-51 368.9 30.6 392 6-433 2-440 (455)
49 1lvl_A Dihydrolipoamide dehydr 100.0 6.6E-46 2.2E-50 363.7 29.7 391 4-433 4-443 (458)
50 2x8g_A Thioredoxin glutathione 100.0 2.5E-45 8.4E-50 371.6 26.9 397 4-434 106-578 (598)
51 4gcm_A TRXR, thioredoxin reduc 100.0 4.8E-41 1.7E-45 313.5 26.8 298 1-333 2-305 (312)
52 2zbw_A Thioredoxin reductase; 100.0 5.8E-40 2E-44 309.4 24.3 303 1-336 1-319 (335)
53 4g6h_A Rotenone-insensitive NA 100.0 3.4E-40 1.2E-44 325.0 23.3 297 5-332 42-399 (502)
54 4a5l_A Thioredoxin reductase; 100.0 5.7E-40 2E-44 306.5 20.4 297 2-332 1-310 (314)
55 1trb_A Thioredoxin reductase; 100.0 2.6E-39 8.9E-44 302.9 22.2 302 1-335 1-315 (320)
56 3ab1_A Ferredoxin--NADP reduct 100.0 8.7E-39 3E-43 304.3 23.4 304 3-335 12-329 (360)
57 2q7v_A Thioredoxin reductase; 100.0 3.6E-38 1.2E-42 295.8 25.9 295 4-335 7-313 (325)
58 3cty_A Thioredoxin reductase; 100.0 2.7E-38 9.4E-43 295.8 24.9 296 2-335 13-317 (319)
59 1fl2_A Alkyl hydroperoxide red 100.0 4.9E-38 1.7E-42 292.9 25.2 293 5-334 1-305 (310)
60 3lzw_A Ferredoxin--NADP reduct 100.0 1.3E-38 4.4E-43 299.6 20.0 302 1-335 1-316 (332)
61 2q0l_A TRXR, thioredoxin reduc 100.0 2.7E-38 9.1E-43 294.8 21.9 288 6-333 2-308 (311)
62 3itj_A Thioredoxin reductase 1 100.0 1.5E-38 5E-43 300.0 20.1 302 4-335 21-336 (338)
63 3f8d_A Thioredoxin reductase ( 100.0 7.9E-38 2.7E-42 293.0 24.7 294 5-334 15-317 (323)
64 3r9u_A Thioredoxin reductase; 100.0 7.2E-38 2.5E-42 292.3 23.6 292 4-333 3-311 (315)
65 4fk1_A Putative thioredoxin re 100.0 3.6E-38 1.2E-42 292.8 19.2 286 3-333 4-299 (304)
66 3vrd_B FCCB subunit, flavocyto 100.0 5.4E-38 1.9E-42 303.1 20.5 319 6-348 3-338 (401)
67 3sx6_A Sulfide-quinone reducta 100.0 5.8E-37 2E-41 298.7 25.6 316 3-340 2-350 (437)
68 3fbs_A Oxidoreductase; structu 100.0 7.5E-38 2.6E-42 289.7 17.9 282 6-334 3-292 (297)
69 1vdc_A NTR, NADPH dependent th 100.0 2.5E-37 8.5E-42 291.1 21.1 300 3-334 6-323 (333)
70 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.6E-36 5.5E-41 301.1 25.7 293 4-333 211-515 (521)
71 3hyw_A Sulfide-quinone reducta 100.0 4.7E-38 1.6E-42 305.5 14.2 309 6-337 3-336 (430)
72 2a87_A TRXR, TR, thioredoxin r 100.0 6.3E-37 2.2E-41 288.5 20.6 295 3-334 12-316 (335)
73 3h8l_A NADH oxidase; membrane 100.0 3.4E-36 1.2E-40 291.2 25.9 291 6-333 2-335 (409)
74 4a9w_A Monooxygenase; baeyer-v 100.0 9.6E-36 3.3E-40 282.8 18.8 302 5-335 3-353 (357)
75 3d1c_A Flavin-containing putat 100.0 2.8E-34 9.4E-39 274.2 23.9 302 5-334 4-339 (369)
76 3h28_A Sulfide-quinone reducta 100.0 7.6E-35 2.6E-39 283.3 19.4 304 6-337 3-336 (430)
77 2vdc_G Glutamate synthase [NAD 100.0 8.9E-34 3E-38 275.8 18.0 287 4-335 121-445 (456)
78 1gte_A Dihydropyrimidine dehyd 100.0 9.6E-33 3.3E-37 293.3 19.9 315 5-361 187-540 (1025)
79 2gag_A Heterotetrameric sarcos 100.0 1.4E-32 4.9E-37 290.0 20.4 285 5-334 128-444 (965)
80 1cjc_A Protein (adrenodoxin re 100.0 1.6E-33 5.5E-38 274.7 11.8 295 4-334 5-395 (460)
81 1lqt_A FPRA; NADP+ derivative, 100.0 2.9E-33 9.8E-38 272.6 10.2 289 5-333 3-386 (456)
82 3s5w_A L-ornithine 5-monooxyge 100.0 3.3E-32 1.1E-36 267.6 17.8 312 5-331 30-446 (463)
83 2xve_A Flavin-containing monoo 100.0 3.2E-31 1.1E-35 259.5 22.5 285 6-333 3-340 (464)
84 1y56_A Hypothetical protein PH 100.0 2E-31 6.7E-36 263.0 14.8 257 4-333 107-376 (493)
85 1o94_A Tmadh, trimethylamine d 100.0 5.1E-32 1.8E-36 278.6 9.1 300 5-360 389-719 (729)
86 3k30_A Histamine dehydrogenase 100.0 4.8E-32 1.6E-36 277.8 7.5 281 4-343 390-684 (690)
87 2gv8_A Monooxygenase; FMO, FAD 100.0 7.9E-30 2.7E-34 249.1 20.7 287 3-333 4-361 (447)
88 1ps9_A 2,4-dienoyl-COA reducta 100.0 2.1E-29 7.3E-34 257.6 12.3 259 5-329 373-671 (671)
89 3gwf_A Cyclohexanone monooxyge 100.0 8E-29 2.7E-33 246.0 14.9 299 5-331 8-454 (540)
90 4ap3_A Steroid monooxygenase; 99.9 6.4E-27 2.2E-31 232.7 16.0 184 4-198 20-226 (549)
91 3uox_A Otemo; baeyer-villiger 99.9 6.1E-27 2.1E-31 232.7 15.1 191 4-198 8-220 (545)
92 1w4x_A Phenylacetone monooxyge 99.9 1.1E-25 3.8E-30 224.6 15.0 302 4-333 15-465 (542)
93 2ywl_A Thioredoxin reductase r 99.9 2.6E-23 9E-28 177.2 17.4 158 165-336 3-173 (180)
94 4b63_A L-ornithine N5 monooxyg 99.9 1.4E-19 4.8E-24 178.5 28.4 289 5-299 39-458 (501)
95 2e5v_A L-aspartate oxidase; ar 99.8 5.3E-20 1.8E-24 180.1 -0.2 221 82-331 129-370 (472)
96 2cul_A Glucose-inhibited divis 99.7 2E-15 6.9E-20 133.5 15.2 157 164-333 4-231 (232)
97 3fpz_A Thiazole biosynthetic e 99.6 1.2E-18 4.1E-23 162.8 -9.3 257 5-332 65-323 (326)
98 2gqf_A Hypothetical protein HI 99.6 3.7E-16 1.3E-20 149.5 3.1 121 1-127 1-169 (401)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.4 6.1E-13 2.1E-17 129.0 7.5 94 204-300 203-307 (431)
100 1rp0_A ARA6, thiazole biosynth 99.3 2.7E-12 9.3E-17 117.0 10.5 168 163-334 39-275 (284)
101 2zxi_A TRNA uridine 5-carboxym 99.3 4.2E-11 1.4E-15 118.6 15.1 158 4-193 26-219 (637)
102 3dme_A Conserved exported prot 99.2 9.3E-11 3.2E-15 110.9 15.0 59 204-263 149-209 (369)
103 3oz2_A Digeranylgeranylglycero 99.2 4.7E-10 1.6E-14 107.1 19.6 37 4-43 3-39 (397)
104 1kf6_A Fumarate reductase flav 99.2 8.3E-12 2.8E-16 125.4 7.1 39 1-42 1-41 (602)
105 2ywl_A Thioredoxin reductase r 99.2 2.4E-11 8.1E-16 102.8 7.8 110 6-130 2-114 (180)
106 3ces_A MNMG, tRNA uridine 5-ca 99.1 8.7E-11 3E-15 116.8 9.6 158 4-193 27-220 (651)
107 3v76_A Flavoprotein; structura 99.1 5.9E-11 2E-15 113.8 7.1 122 1-127 23-188 (417)
108 1y56_B Sarcosine oxidase; dehy 99.1 7E-10 2.4E-14 105.5 14.3 58 204-263 148-205 (382)
109 3dje_A Fructosyl amine: oxygen 99.1 1.4E-09 4.9E-14 105.4 15.3 58 204-262 160-220 (438)
110 3nix_A Flavoprotein/dehydrogen 99.1 1.9E-09 6.3E-14 104.0 14.5 61 205-265 106-168 (421)
111 2bry_A NEDD9 interacting prote 99.0 4.4E-11 1.5E-15 117.6 1.9 150 114-266 37-233 (497)
112 2cul_A Glucose-inhibited divis 99.0 5.3E-10 1.8E-14 98.5 7.8 117 5-128 3-127 (232)
113 4dgk_A Phytoene dehydrogenase; 99.0 8.6E-10 3E-14 108.9 9.4 58 205-263 221-278 (501)
114 2gag_B Heterotetrameric sarcos 99.0 5.6E-09 1.9E-13 100.0 14.8 58 204-263 173-230 (405)
115 3gyx_A Adenylylsulfate reducta 99.0 1.3E-10 4.4E-15 117.4 3.4 35 5-42 22-62 (662)
116 3pvc_A TRNA 5-methylaminomethy 98.9 2.6E-08 9E-13 102.0 18.1 58 204-263 411-469 (689)
117 2x3n_A Probable FAD-dependent 98.9 1.8E-09 6E-14 103.4 8.8 125 1-128 1-168 (399)
118 3alj_A 2-methyl-3-hydroxypyrid 98.9 2E-09 6.7E-14 102.3 8.7 120 5-130 11-164 (379)
119 2i0z_A NAD(FAD)-utilizing dehy 98.9 5.8E-09 2E-13 101.3 12.0 59 204-263 133-191 (447)
120 3cgv_A Geranylgeranyl reductas 98.9 1.3E-08 4.6E-13 97.1 14.3 59 205-264 102-163 (397)
121 3axb_A Putative oxidoreductase 98.9 5.8E-09 2E-13 101.4 11.5 59 204-263 180-254 (448)
122 2e4g_A Tryptophan halogenase; 98.9 7.2E-09 2.5E-13 103.3 12.3 60 205-265 194-254 (550)
123 1s3e_A Amine oxidase [flavin-c 98.9 2.3E-09 7.7E-14 106.4 8.3 51 210-262 217-267 (520)
124 2vou_A 2,6-dihydroxypyridine h 98.9 2.4E-09 8.2E-14 102.4 8.1 125 1-128 1-155 (397)
125 3ps9_A TRNA 5-methylaminomethy 98.9 7.6E-08 2.6E-12 98.4 19.5 58 204-263 416-473 (676)
126 3cp8_A TRNA uridine 5-carboxym 98.9 1.5E-09 5.1E-14 107.9 6.5 158 4-192 20-213 (641)
127 3ihg_A RDME; flavoenzyme, anth 98.9 3.1E-09 1.1E-13 105.8 8.5 39 1-42 1-39 (535)
128 2gf3_A MSOX, monomeric sarcosi 98.9 2.5E-08 8.6E-13 94.9 14.5 72 187-264 135-206 (389)
129 3atr_A Conserved archaeal prot 98.8 1.3E-09 4.3E-14 106.2 4.3 127 1-130 2-166 (453)
130 1rp0_A ARA6, thiazole biosynth 98.8 4.5E-09 1.5E-13 95.6 7.6 121 4-128 38-193 (284)
131 3nrn_A Uncharacterized protein 98.8 9.1E-09 3.1E-13 99.2 10.0 61 204-268 188-248 (421)
132 3nlc_A Uncharacterized protein 98.8 6.2E-09 2.1E-13 102.6 8.8 120 5-127 107-278 (549)
133 3e1t_A Halogenase; flavoprotei 98.8 8.8E-09 3E-13 101.8 10.0 124 4-130 6-176 (512)
134 3pl8_A Pyranose 2-oxidase; sub 98.8 1.9E-10 6.6E-15 115.8 -2.3 54 216-269 271-330 (623)
135 3i3l_A Alkylhalidase CMLS; fla 98.8 9.4E-09 3.2E-13 102.8 9.1 123 3-128 21-190 (591)
136 3fmw_A Oxygenase; mithramycin, 98.8 5E-09 1.7E-13 104.6 6.9 121 5-128 49-209 (570)
137 3nyc_A D-arginine dehydrogenas 98.8 1.5E-08 5.1E-13 96.2 9.8 57 204-263 153-209 (381)
138 4a9w_A Monooxygenase; baeyer-v 98.8 7E-08 2.4E-12 90.5 13.7 96 164-262 4-131 (357)
139 1yvv_A Amine oxidase, flavin-c 98.8 3.4E-08 1.2E-12 92.0 11.1 118 5-125 2-161 (336)
140 1pj5_A N,N-dimethylglycine oxi 98.8 4.8E-08 1.6E-12 102.2 13.2 58 204-263 150-207 (830)
141 2xdo_A TETX2 protein; tetracyc 98.7 5.9E-08 2E-12 92.7 12.5 125 3-130 24-186 (398)
142 3nlc_A Uncharacterized protein 98.7 3.9E-08 1.3E-12 96.9 11.2 102 163-265 107-279 (549)
143 2oln_A NIKD protein; flavoprot 98.7 1.2E-07 4E-12 90.6 14.3 56 204-262 152-207 (397)
144 2bry_A NEDD9 interacting prote 98.7 1.3E-08 4.4E-13 100.0 7.3 124 4-130 91-234 (497)
145 3ka7_A Oxidoreductase; structu 98.7 3.7E-08 1.3E-12 95.0 10.2 62 205-268 196-257 (425)
146 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 4.6E-08 1.6E-12 91.4 10.1 116 6-124 2-163 (342)
147 2pyx_A Tryptophan halogenase; 98.7 6E-08 2E-12 96.2 11.0 60 205-265 175-235 (526)
148 1ryi_A Glycine oxidase; flavop 98.7 4.1E-08 1.4E-12 93.2 9.1 36 4-42 16-51 (382)
149 2qa1_A PGAE, polyketide oxygen 98.7 4.3E-08 1.5E-12 96.4 9.0 122 3-128 9-167 (500)
150 1y0p_A Fumarate reductase flav 98.7 3.8E-08 1.3E-12 98.6 8.4 36 5-43 126-161 (571)
151 1qo8_A Flavocytochrome C3 fuma 98.6 3.6E-08 1.2E-12 98.6 7.9 37 4-43 120-156 (566)
152 3itj_A Thioredoxin reductase 1 98.6 1.1E-07 3.9E-12 88.3 10.6 102 162-266 21-145 (338)
153 3lzw_A Ferredoxin--NADP reduct 98.6 1E-07 3.5E-12 88.4 10.2 100 164-265 8-128 (332)
154 3da1_A Glycerol-3-phosphate de 98.6 1.7E-07 5.8E-12 93.4 12.3 59 204-263 169-232 (561)
155 3f8d_A Thioredoxin reductase ( 98.6 2.1E-07 7.2E-12 85.9 11.8 100 164-266 16-128 (323)
156 2qa2_A CABE, polyketide oxygen 98.6 1.3E-07 4.5E-12 92.9 10.5 122 4-128 11-168 (499)
157 3gwf_A Cyclohexanone monooxyge 98.6 3.3E-07 1.1E-11 90.8 13.4 102 164-265 9-151 (540)
158 3p1w_A Rabgdi protein; GDI RAB 98.6 4.2E-08 1.4E-12 94.7 6.8 58 205-262 256-313 (475)
159 4ap3_A Steroid monooxygenase; 98.6 3E-07 1E-11 91.3 13.1 103 163-265 21-163 (549)
160 3rp8_A Flavoprotein monooxygen 98.6 6.4E-08 2.2E-12 92.8 7.8 123 4-129 22-184 (407)
161 2zbw_A Thioredoxin reductase; 98.6 3.2E-07 1.1E-11 85.3 12.2 98 163-262 5-120 (335)
162 3v76_A Flavoprotein; structura 98.6 2.6E-07 9E-12 88.4 11.6 99 163-264 27-188 (417)
163 3ab1_A Ferredoxin--NADP reduct 98.6 5.1E-07 1.7E-11 84.9 13.1 99 163-262 14-130 (360)
164 2uzz_A N-methyl-L-tryptophan o 98.6 1.4E-07 4.8E-12 89.1 9.3 35 5-42 2-36 (372)
165 3alj_A 2-methyl-3-hydroxypyrid 98.6 4.8E-07 1.7E-11 85.7 13.0 99 163-266 11-163 (379)
166 2aqj_A Tryptophan halogenase, 98.6 4.7E-08 1.6E-12 97.3 6.1 39 1-42 1-42 (538)
167 3fbs_A Oxidoreductase; structu 98.6 4.2E-07 1.4E-11 82.8 11.7 100 164-266 3-115 (297)
168 1k0i_A P-hydroxybenzoate hydro 98.6 1.5E-07 5.3E-12 89.7 9.1 123 5-130 2-167 (394)
169 3klj_A NAD(FAD)-dependent dehy 98.6 8.3E-08 2.8E-12 91.0 7.1 101 162-266 8-119 (385)
170 3sx6_A Sulfide-quinone reducta 98.6 1.1E-07 3.9E-12 91.9 8.2 99 164-267 5-116 (437)
171 2q0l_A TRXR, thioredoxin reduc 98.5 5.4E-07 1.8E-11 82.8 12.3 98 165-265 3-116 (311)
172 2gmh_A Electron transfer flavo 98.5 1.3E-07 4.5E-12 94.6 8.7 36 5-43 35-76 (584)
173 1fl2_A Alkyl hydroperoxide red 98.5 4.4E-07 1.5E-11 83.3 11.6 101 165-265 3-117 (310)
174 2weu_A Tryptophan 5-halogenase 98.5 9.7E-07 3.3E-11 87.2 14.8 61 204-265 172-232 (511)
175 2xve_A Flavin-containing monoo 98.5 7.5E-07 2.6E-11 86.7 13.6 103 164-266 3-171 (464)
176 1chu_A Protein (L-aspartate ox 98.5 3.1E-07 1E-11 91.1 10.7 56 275-332 353-409 (540)
177 2wdq_A Succinate dehydrogenase 98.5 6.2E-07 2.1E-11 89.8 12.8 58 204-261 142-204 (588)
178 2bs2_A Quinol-fumarate reducta 98.5 1.6E-07 5.6E-12 94.9 8.1 39 1-42 1-39 (660)
179 2gqf_A Hypothetical protein HI 98.5 8.7E-07 3E-11 84.5 12.7 99 164-264 5-169 (401)
180 1vdc_A NTR, NADPH dependent th 98.5 4.7E-07 1.6E-11 84.1 10.5 98 164-265 9-126 (333)
181 3c4n_A Uncharacterized protein 98.5 4.9E-08 1.7E-12 93.5 3.8 35 5-42 36-72 (405)
182 2q7v_A Thioredoxin reductase; 98.5 8.4E-07 2.9E-11 82.1 11.8 101 164-265 9-125 (325)
183 3uox_A Otemo; baeyer-villiger 98.5 4.6E-07 1.6E-11 89.9 10.5 102 164-265 10-151 (545)
184 4at0_A 3-ketosteroid-delta4-5a 98.5 4.1E-07 1.4E-11 89.7 10.1 37 4-43 40-76 (510)
185 3hyw_A Sulfide-quinone reducta 98.5 5.5E-08 1.9E-12 93.9 3.6 96 164-264 3-110 (430)
186 3kkj_A Amine oxidase, flavin-c 98.5 1.3E-07 4.5E-12 85.2 5.8 36 5-43 2-37 (336)
187 2qcu_A Aerobic glycerol-3-phos 98.5 1.3E-06 4.4E-11 86.0 13.3 36 4-42 2-37 (501)
188 3d1c_A Flavin-containing putat 98.5 1.9E-06 6.4E-11 81.2 13.8 98 164-264 5-144 (369)
189 4fk1_A Putative thioredoxin re 98.5 1.2E-06 4.1E-11 80.2 12.2 100 165-265 8-119 (304)
190 3jsk_A Cypbp37 protein; octame 98.5 3.2E-07 1.1E-11 84.4 8.0 36 5-43 79-116 (344)
191 4hb9_A Similarities with proba 98.5 2.5E-07 8.4E-12 88.6 7.6 120 6-128 2-168 (412)
192 1hyu_A AHPF, alkyl hydroperoxi 98.5 1.5E-06 5.3E-11 85.8 13.4 104 162-265 211-328 (521)
193 3c96_A Flavin-containing monoo 98.4 1.7E-07 5.8E-12 89.9 6.2 39 1-42 1-39 (410)
194 2yqu_A 2-oxoglutarate dehydrog 98.4 4.8E-07 1.6E-11 88.0 9.1 99 5-129 167-267 (455)
195 1y0p_A Fumarate reductase flav 98.4 2.2E-06 7.6E-11 85.7 14.1 100 163-262 126-316 (571)
196 1qo8_A Flavocytochrome C3 fuma 98.4 1.1E-06 3.8E-11 87.8 11.5 100 164-263 122-312 (566)
197 2h88_A Succinate dehydrogenase 98.4 3.3E-07 1.1E-11 92.0 7.6 36 4-42 17-52 (621)
198 1d4d_A Flavocytochrome C fumar 98.4 5.3E-07 1.8E-11 90.2 9.0 36 5-43 126-161 (572)
199 2x3n_A Probable FAD-dependent 98.4 1.5E-06 5.1E-11 83.0 11.8 101 164-265 7-168 (399)
200 1trb_A Thioredoxin reductase; 98.4 1.4E-06 4.9E-11 80.3 11.1 98 164-265 6-118 (320)
201 3vrd_B FCCB subunit, flavocyto 98.4 6E-07 2.1E-11 85.8 8.7 101 163-268 2-113 (401)
202 3cty_A Thioredoxin reductase; 98.4 2.1E-06 7.3E-11 79.1 12.1 98 164-265 17-128 (319)
203 1xhc_A NADH oxidase /nitrite r 98.4 3.1E-07 1.1E-11 86.6 6.4 99 162-266 7-116 (367)
204 2gv8_A Monooxygenase; FMO, FAD 98.4 1.5E-06 5.1E-11 84.3 11.3 102 162-265 5-181 (447)
205 3h28_A Sulfide-quinone reducta 98.4 2E-07 6.8E-12 90.0 5.1 98 164-266 3-112 (430)
206 3h8l_A NADH oxidase; membrane 98.4 3.2E-07 1.1E-11 87.9 6.2 98 164-266 2-116 (409)
207 2a87_A TRXR, TR, thioredoxin r 98.4 1.4E-06 4.7E-11 81.1 10.3 99 163-265 14-128 (335)
208 2gqw_A Ferredoxin reductase; f 98.4 7.6E-07 2.6E-11 85.2 8.6 97 5-128 145-241 (408)
209 3fg2_P Putative rubredoxin red 98.4 6.2E-07 2.1E-11 85.7 7.9 97 164-265 2-112 (404)
210 1q1r_A Putidaredoxin reductase 98.4 1.1E-06 3.7E-11 84.8 9.5 101 163-267 4-118 (431)
211 2r0c_A REBC; flavin adenine di 98.4 7.2E-07 2.5E-11 88.8 8.4 36 4-42 25-60 (549)
212 2v3a_A Rubredoxin reductase; a 98.4 7.6E-07 2.6E-11 84.5 8.1 99 5-128 145-245 (384)
213 3ef6_A Toluene 1,2-dioxygenase 98.3 1.7E-06 5.8E-11 82.8 10.3 99 164-266 3-114 (410)
214 2gjc_A Thiazole biosynthetic e 98.3 1.4E-06 4.9E-11 79.6 9.2 36 5-43 65-102 (326)
215 2vou_A 2,6-dihydroxypyridine h 98.3 2.4E-06 8.1E-11 81.5 11.2 102 163-266 5-156 (397)
216 1chu_A Protein (L-aspartate ox 98.3 5.4E-06 1.8E-10 82.1 14.1 33 164-197 9-41 (540)
217 1nhp_A NADH peroxidase; oxidor 98.3 8.3E-07 2.8E-11 86.1 8.0 100 4-129 148-249 (447)
218 1yvv_A Amine oxidase, flavin-c 98.3 6E-06 2.1E-10 76.6 13.6 100 164-266 3-165 (336)
219 2dkh_A 3-hydroxybenzoate hydro 98.3 6.7E-07 2.3E-11 90.6 7.1 36 4-42 31-67 (639)
220 2eq6_A Pyruvate dehydrogenase 98.3 1.5E-06 5.2E-11 84.6 9.3 99 5-129 169-274 (464)
221 1ges_A Glutathione reductase; 98.3 1.8E-06 6.3E-11 83.7 9.9 99 5-129 167-268 (450)
222 4a5l_A Thioredoxin reductase; 98.3 3.9E-06 1.3E-10 77.0 11.6 98 165-265 6-123 (314)
223 1lvl_A Dihydrolipoamide dehydr 98.3 1.2E-06 4E-11 85.2 8.1 97 5-129 171-271 (458)
224 3oc4_A Oxidoreductase, pyridin 98.3 1.6E-06 5.5E-11 84.2 9.0 101 164-266 3-118 (452)
225 3jsk_A Cypbp37 protein; octame 98.3 1.1E-05 3.7E-10 74.2 13.9 167 163-333 79-334 (344)
226 3lxd_A FAD-dependent pyridine 98.3 1.9E-06 6.4E-11 82.7 9.2 99 5-128 152-253 (415)
227 2r9z_A Glutathione amide reduc 98.3 2.3E-06 7.8E-11 83.3 9.8 99 5-129 166-267 (463)
228 3kd9_A Coenzyme A disulfide re 98.3 1.7E-06 6E-11 83.9 8.9 100 163-266 3-117 (449)
229 3ces_A MNMG, tRNA uridine 5-ca 98.3 6.9E-06 2.4E-10 81.8 13.1 99 164-264 29-182 (651)
230 2zxi_A TRNA uridine 5-carboxym 98.3 7.1E-06 2.4E-10 81.5 13.1 100 164-265 28-182 (637)
231 1ebd_A E3BD, dihydrolipoamide 98.3 1.8E-06 6.1E-11 83.9 8.6 99 5-129 170-273 (455)
232 3r9u_A Thioredoxin reductase; 98.3 3.5E-06 1.2E-10 77.3 10.1 101 163-266 4-121 (315)
233 1k0i_A P-hydroxybenzoate hydro 98.3 5.2E-06 1.8E-10 79.0 11.5 102 164-266 3-166 (394)
234 3ics_A Coenzyme A-disulfide re 98.2 2.1E-06 7.3E-11 86.3 9.0 103 162-266 35-155 (588)
235 1ryi_A Glycine oxidase; flavop 98.2 6.1E-06 2.1E-10 78.1 11.6 56 206-264 165-220 (382)
236 1c0p_A D-amino acid oxidase; a 98.2 8.5E-07 2.9E-11 83.5 5.6 39 1-42 2-40 (363)
237 4eqs_A Coenzyme A disulfide re 98.2 3.2E-06 1.1E-10 81.6 9.7 96 5-128 147-242 (437)
238 3atr_A Conserved archaeal prot 98.2 7.3E-06 2.5E-10 79.5 12.0 101 164-265 7-164 (453)
239 4hb9_A Similarities with proba 98.2 1.1E-05 3.8E-10 76.9 13.1 101 164-265 2-168 (412)
240 1w4x_A Phenylacetone monooxyge 98.2 1.1E-05 3.6E-10 80.3 13.2 98 164-261 17-152 (542)
241 3s5w_A L-ornithine 5-monooxyge 98.2 3.2E-06 1.1E-10 82.4 8.9 102 165-266 32-195 (463)
242 3iwa_A FAD-dependent pyridine 98.2 3.6E-06 1.2E-10 82.2 9.1 102 163-266 3-128 (472)
243 3i3l_A Alkylhalidase CMLS; fla 98.2 1E-05 3.5E-10 80.8 12.5 102 163-265 23-190 (591)
244 2gmh_A Electron transfer flavo 98.2 1.8E-05 6.1E-10 79.2 14.1 102 164-265 36-219 (584)
245 2hqm_A GR, grase, glutathione 98.2 4.8E-06 1.6E-10 81.4 9.6 98 5-128 185-287 (479)
246 1onf_A GR, grase, glutathione 98.2 6.9E-06 2.4E-10 80.7 10.8 98 5-128 176-277 (500)
247 2wpf_A Trypanothione reductase 98.2 4.9E-06 1.7E-10 81.7 9.6 98 5-128 191-294 (495)
248 4gcm_A TRXR, thioredoxin reduc 98.2 1.2E-05 4.2E-10 73.7 11.7 98 165-266 8-119 (312)
249 1fec_A Trypanothione reductase 98.2 3.6E-06 1.2E-10 82.5 8.5 98 5-128 187-290 (490)
250 3cp8_A TRNA uridine 5-carboxym 98.2 1.3E-05 4.6E-10 79.7 12.3 99 164-264 22-175 (641)
251 1d4d_A Flavocytochrome C fumar 98.1 1.8E-05 6.2E-10 79.0 13.3 101 163-263 126-317 (572)
252 3qj4_A Renalase; FAD/NAD(P)-bi 98.1 6E-06 2.1E-10 76.9 9.1 95 165-261 3-163 (342)
253 1v59_A Dihydrolipoamide dehydr 98.1 5.3E-06 1.8E-10 81.2 9.0 99 5-129 183-290 (478)
254 3rp8_A Flavoprotein monooxygen 98.1 1.2E-05 4.1E-10 76.8 11.3 101 162-266 22-184 (407)
255 2a8x_A Dihydrolipoyl dehydroge 98.1 3.6E-06 1.2E-10 82.0 7.6 99 5-129 171-274 (464)
256 2bc0_A NADH oxidase; flavoprot 98.1 5.6E-06 1.9E-10 81.2 8.9 99 5-129 194-294 (490)
257 1ojt_A Surface protein; redox- 98.1 2.2E-06 7.6E-11 83.9 6.0 98 5-128 185-288 (482)
258 4b1b_A TRXR, thioredoxin reduc 98.1 7E-06 2.4E-10 81.0 9.5 98 5-129 223-322 (542)
259 1zmd_A Dihydrolipoyl dehydroge 98.1 8E-06 2.7E-10 79.8 9.8 100 5-129 178-285 (474)
260 1mo9_A ORF3; nucleotide bindin 98.1 7.8E-06 2.7E-10 80.8 9.7 98 6-129 215-319 (523)
261 2gjc_A Thiazole biosynthetic e 98.1 3.8E-05 1.3E-09 70.2 13.5 167 163-332 65-323 (326)
262 2cdu_A NADPH oxidase; flavoenz 98.1 5.1E-06 1.7E-10 80.6 8.1 100 5-129 149-250 (452)
263 1xdi_A RV3303C-LPDA; reductase 98.1 1.1E-05 3.7E-10 79.3 10.5 98 5-128 182-281 (499)
264 3ntd_A FAD-dependent pyridine 98.1 5E-06 1.7E-10 83.1 8.2 101 164-266 2-120 (565)
265 3e1t_A Halogenase; flavoprotei 98.1 2.4E-05 8.1E-10 77.2 12.9 101 164-265 8-174 (512)
266 2vdc_G Glutamate synthase [NAD 98.1 1.9E-06 6.4E-11 83.5 4.6 90 162-262 121-218 (456)
267 4g6h_A Rotenone-insensitive NA 98.1 3.6E-06 1.2E-10 82.6 6.3 101 163-266 42-172 (502)
268 2xdo_A TETX2 protein; tetracyc 98.1 1.7E-05 5.8E-10 75.6 10.7 102 162-265 25-184 (398)
269 2uzz_A N-methyl-L-tryptophan o 98.1 2.5E-05 8.7E-10 73.5 11.8 55 206-263 150-204 (372)
270 2qae_A Lipoamide, dihydrolipoy 98.1 9.7E-06 3.3E-10 79.0 9.0 98 5-128 174-278 (468)
271 3fmw_A Oxygenase; mithramycin, 98.1 1.8E-05 6.3E-10 78.8 11.1 100 164-265 50-209 (570)
272 3ihg_A RDME; flavoenzyme, anth 98.1 2E-05 6.9E-10 78.1 11.4 100 164-263 6-183 (535)
273 1pn0_A Phenol 2-monooxygenase; 98.0 2.8E-06 9.4E-11 86.4 5.0 35 5-42 8-47 (665)
274 3o0h_A Glutathione reductase; 98.0 1.4E-05 4.9E-10 78.2 9.9 99 5-129 191-291 (484)
275 2aqj_A Tryptophan halogenase, 98.0 4.8E-05 1.7E-09 75.4 13.8 56 209-265 169-224 (538)
276 1dxl_A Dihydrolipoamide dehydr 98.0 6.4E-06 2.2E-10 80.4 7.3 99 5-129 177-282 (470)
277 3cgb_A Pyridine nucleotide-dis 98.0 1E-05 3.6E-10 79.0 8.7 101 164-266 37-155 (480)
278 3i6d_A Protoporphyrinogen oxid 98.0 2.1E-06 7.1E-11 83.7 3.4 41 220-262 248-288 (470)
279 2yg5_A Putrescine oxidase; oxi 98.0 3.3E-06 1.1E-10 81.9 4.9 41 1-44 1-41 (453)
280 2bcg_G Secretory pathway GDP d 98.0 5.3E-06 1.8E-10 80.5 6.1 59 205-264 242-301 (453)
281 4gde_A UDP-galactopyranose mut 98.0 3.8E-06 1.3E-10 82.9 5.0 54 205-262 222-275 (513)
282 4at0_A 3-ketosteroid-delta4-5a 98.0 6.4E-05 2.2E-09 74.0 13.5 57 206-262 203-263 (510)
283 3ic9_A Dihydrolipoamide dehydr 98.0 1.9E-05 6.4E-10 77.4 9.6 98 5-129 174-277 (492)
284 1zk7_A HGII, reductase, mercur 98.0 1.2E-05 4E-10 78.4 8.1 96 5-128 176-273 (467)
285 4dna_A Probable glutathione re 98.0 1.4E-05 4.9E-10 77.7 8.6 98 5-129 170-271 (463)
286 3lad_A Dihydrolipoamide dehydr 98.0 1.9E-05 6.6E-10 77.1 9.2 99 5-129 180-283 (476)
287 3l8k_A Dihydrolipoyl dehydroge 98.0 1.3E-05 4.5E-10 78.0 7.9 98 164-266 5-147 (466)
288 1m6i_A Programmed cell death p 97.9 1.5E-05 5.1E-10 78.1 7.9 99 5-128 180-284 (493)
289 1v0j_A UDP-galactopyranose mut 97.9 9.4E-06 3.2E-10 77.3 5.9 38 4-44 6-44 (399)
290 2b9w_A Putative aminooxidase; 97.9 1E-05 3.4E-10 77.8 6.2 54 206-262 204-257 (424)
291 1rsg_A FMS1 protein; FAD bindi 97.9 6.3E-06 2.2E-10 81.4 4.7 38 4-44 7-45 (516)
292 3c96_A Flavin-containing monoo 97.9 4.2E-05 1.4E-09 73.1 10.3 101 163-266 4-172 (410)
293 3dgh_A TRXR-1, thioredoxin red 97.9 1.3E-05 4.6E-10 78.4 6.9 98 5-129 187-292 (483)
294 3urh_A Dihydrolipoyl dehydroge 97.9 3.6E-05 1.2E-09 75.5 9.9 99 5-129 198-303 (491)
295 2qa2_A CABE, polyketide oxygen 97.9 8.7E-05 3E-09 72.8 12.5 102 162-265 11-168 (499)
296 3dk9_A Grase, GR, glutathione 97.9 1.8E-05 6E-10 77.4 7.4 99 5-129 187-296 (478)
297 3hdq_A UDP-galactopyranose mut 97.9 1.4E-05 5E-10 75.4 5.9 38 3-43 27-64 (397)
298 2qa1_A PGAE, polyketide oxygen 97.9 9.4E-05 3.2E-09 72.5 11.9 102 162-265 10-167 (500)
299 3nks_A Protoporphyrinogen oxid 97.9 8.9E-06 3E-10 79.5 4.5 56 205-262 234-289 (477)
300 1y56_A Hypothetical protein PH 97.9 2.1E-05 7.1E-10 77.1 7.1 99 164-265 109-221 (493)
301 2jae_A L-amino acid oxidase; o 97.9 1.4E-05 4.6E-10 78.5 5.8 40 2-44 8-47 (489)
302 3dgz_A Thioredoxin reductase 2 97.8 3.8E-05 1.3E-09 75.2 8.7 98 5-129 185-290 (488)
303 3ihm_A Styrene monooxygenase A 97.8 1.1E-05 3.8E-10 77.6 4.4 34 5-41 22-55 (430)
304 2e1m_A L-glutamate oxidase; L- 97.8 1.7E-05 5.9E-10 74.3 5.5 38 3-43 42-80 (376)
305 2gag_A Heterotetrameric sarcos 97.8 7.3E-05 2.5E-09 79.2 10.6 101 163-265 128-255 (965)
306 4dsg_A UDP-galactopyranose mut 97.8 2.1E-05 7.3E-10 76.8 6.1 37 4-43 8-45 (484)
307 3c4n_A Uncharacterized protein 97.8 4.4E-05 1.5E-09 72.9 7.9 54 207-263 174-236 (405)
308 1cjc_A Protein (adrenodoxin re 97.8 7.8E-06 2.7E-10 79.3 2.5 91 162-263 5-106 (460)
309 2qcu_A Aerobic glycerol-3-phos 97.7 0.00024 8.2E-09 69.7 12.6 56 207-264 151-211 (501)
310 1gte_A Dihydropyrimidine dehyd 97.7 1.3E-05 4.5E-10 85.4 3.8 94 163-265 187-290 (1025)
311 1sez_A Protoporphyrinogen oxid 97.7 2.2E-05 7.4E-10 77.3 4.9 38 4-44 12-49 (504)
312 3qfa_A Thioredoxin reductase 1 97.7 9.2E-05 3.2E-09 73.0 9.1 98 5-129 210-318 (519)
313 2rgh_A Alpha-glycerophosphate 97.7 1.9E-05 6.4E-10 78.8 4.0 58 204-262 187-249 (571)
314 3lov_A Protoporphyrinogen oxid 97.7 2.6E-05 9E-10 76.1 4.9 36 5-43 4-41 (475)
315 1d5t_A Guanine nucleotide diss 97.7 4.3E-05 1.5E-09 73.6 6.2 58 205-264 234-291 (433)
316 1lqt_A FPRA; NADP+ derivative, 97.7 8.7E-06 3E-10 78.9 1.0 89 163-262 3-107 (456)
317 2e5v_A L-aspartate oxidase; ar 97.7 0.00029 9.8E-09 68.5 11.6 99 165-265 1-178 (472)
318 1ps9_A 2,4-dienoyl-COA reducta 97.7 5.9E-05 2E-09 76.9 7.0 87 163-266 373-470 (671)
319 3c4a_A Probable tryptophan hyd 97.6 3.6E-05 1.2E-09 72.8 4.7 35 6-43 1-37 (381)
320 2ivd_A PPO, PPOX, protoporphyr 97.6 3.9E-05 1.3E-09 74.9 5.0 37 4-43 15-51 (478)
321 3g3e_A D-amino-acid oxidase; F 97.6 3.1E-05 1.1E-09 72.3 4.0 46 204-263 141-186 (351)
322 3k30_A Histamine dehydrogenase 97.6 7.8E-05 2.7E-09 76.2 7.1 97 6-127 524-625 (690)
323 3g5s_A Methylenetetrahydrofola 97.6 6E-05 2E-09 70.0 5.5 34 6-42 2-35 (443)
324 2x8g_A Thioredoxin glutathione 97.6 0.00015 5E-09 73.0 8.9 97 5-128 286-397 (598)
325 2bi7_A UDP-galactopyranose mut 97.6 5.1E-05 1.8E-09 71.7 5.1 37 5-44 3-39 (384)
326 1i8t_A UDP-galactopyranose mut 97.6 4.9E-05 1.7E-09 71.4 4.8 35 6-43 2-36 (367)
327 2iid_A L-amino-acid oxidase; f 97.6 5.8E-05 2E-09 74.1 5.2 37 4-43 32-68 (498)
328 2vvm_A Monoamine oxidase N; FA 97.6 5.3E-05 1.8E-09 74.3 4.9 56 205-262 255-311 (495)
329 1o94_A Tmadh, trimethylamine d 97.4 8E-05 2.7E-09 76.6 4.7 88 163-264 389-492 (729)
330 1jnr_A Adenylylsulfate reducta 97.4 0.0001 3.6E-09 74.5 5.0 35 5-42 22-60 (643)
331 1kf6_A Fumarate reductase flav 97.4 0.00083 2.8E-08 67.3 11.3 97 164-261 6-195 (602)
332 3c4a_A Probable tryptophan hyd 97.4 0.00012 4.1E-09 69.2 4.5 87 165-264 2-144 (381)
333 2dkh_A 3-hydroxybenzoate hydro 97.4 0.00085 2.9E-08 67.9 10.9 100 164-263 33-211 (639)
334 1b37_A Protein (polyamine oxid 97.3 0.0002 7E-09 69.7 5.4 54 206-261 207-268 (472)
335 2rgh_A Alpha-glycerophosphate 97.3 0.0016 5.4E-08 64.9 11.8 34 163-196 32-65 (571)
336 2r0c_A REBC; flavin adenine di 97.2 0.0015 5E-08 64.9 10.9 97 164-265 27-198 (549)
337 1ju2_A HydroxynitrIle lyase; f 97.2 0.00012 4.3E-09 72.3 3.1 35 4-42 25-59 (536)
338 1kdg_A CDH, cellobiose dehydro 97.2 0.00026 8.8E-09 70.3 5.2 58 210-268 201-266 (546)
339 4gut_A Lysine-specific histone 97.2 0.00029 9.8E-09 72.5 5.1 42 218-261 542-583 (776)
340 3t37_A Probable dehydrogenase; 97.1 0.00027 9.3E-09 69.8 4.1 52 216-268 222-276 (526)
341 2h88_A Succinate dehydrogenase 97.1 0.0037 1.3E-07 62.7 11.9 49 212-261 162-215 (621)
342 2z3y_A Lysine-specific histone 97.1 0.00043 1.5E-08 70.3 5.2 36 5-43 107-142 (662)
343 3q9t_A Choline dehydrogenase a 97.1 0.00035 1.2E-08 69.4 4.4 53 216-268 217-275 (577)
344 2xag_A Lysine-specific histone 97.0 0.00052 1.8E-08 71.1 5.5 37 5-44 278-314 (852)
345 2bs2_A Quinol-fumarate reducta 97.0 0.0072 2.5E-07 61.0 13.0 50 211-261 164-218 (660)
346 2jbv_A Choline oxidase; alcoho 96.9 0.00059 2E-08 67.6 4.7 57 211-267 215-277 (546)
347 4gut_A Lysine-specific histone 96.9 0.0064 2.2E-07 62.6 12.4 35 164-198 337-371 (776)
348 1coy_A Cholesterol oxidase; ox 96.9 0.00085 2.9E-08 65.8 5.4 37 3-42 9-45 (507)
349 3i6d_A Protoporphyrinogen oxid 96.9 0.0057 2E-07 59.1 11.3 36 163-198 5-46 (470)
350 3qvp_A Glucose oxidase; oxidor 96.9 0.00061 2.1E-08 67.7 4.3 59 210-268 232-298 (583)
351 1gpe_A Protein (glucose oxidas 96.8 0.00092 3.1E-08 66.8 5.3 56 213-268 239-302 (587)
352 1n4w_A CHOD, cholesterol oxida 96.8 0.00088 3E-08 65.7 5.1 37 4-43 4-40 (504)
353 3ayj_A Pro-enzyme of L-phenyla 96.8 0.00054 1.8E-08 69.2 3.4 36 5-43 56-100 (721)
354 4g65_A TRK system potassium up 96.8 0.0038 1.3E-07 60.2 8.9 100 140-262 210-311 (461)
355 1pn0_A Phenol 2-monooxygenase; 96.8 0.0082 2.8E-07 60.8 11.5 33 164-196 9-46 (665)
356 4b63_A L-ornithine N5 monooxyg 96.7 0.0093 3.2E-07 58.3 10.8 61 206-266 146-217 (501)
357 1jnr_A Adenylylsulfate reducta 96.7 0.013 4.3E-07 59.3 12.1 49 213-261 159-216 (643)
358 3fim_B ARYL-alcohol oxidase; A 96.5 0.00091 3.1E-08 66.3 2.7 60 209-268 212-281 (566)
359 3lk7_A UDP-N-acetylmuramoylala 96.4 0.0057 1.9E-07 59.0 7.1 132 5-191 9-143 (451)
360 1vg0_A RAB proteins geranylger 96.3 0.0048 1.6E-07 61.5 6.2 61 204-264 377-438 (650)
361 3kkj_A Amine oxidase, flavin-c 96.1 0.0057 2E-07 54.1 5.1 34 165-198 4-37 (336)
362 3gyx_A Adenylylsulfate reducta 96.0 0.024 8.3E-07 57.2 10.0 32 164-195 23-60 (662)
363 3lk7_A UDP-N-acetylmuramoylala 95.6 0.018 6.2E-07 55.4 6.7 82 162-268 8-89 (451)
364 3eag_A UDP-N-acetylmuramate:L- 95.6 0.025 8.5E-07 51.8 7.2 80 162-268 3-83 (326)
365 4dgk_A Phytoene dehydrogenase; 95.4 0.01 3.5E-07 58.0 4.4 36 164-199 2-37 (501)
366 3fpz_A Thiazole biosynthetic e 95.3 0.013 4.4E-07 53.8 4.5 74 154-227 56-138 (326)
367 3llv_A Exopolyphosphatase-rela 95.2 0.028 9.5E-07 44.3 5.5 34 5-41 6-39 (141)
368 1id1_A Putative potassium chan 95.1 0.032 1.1E-06 44.7 5.8 33 5-40 3-35 (153)
369 4hv4_A UDP-N-acetylmuramate--L 94.9 0.019 6.6E-07 55.9 4.4 129 4-191 21-153 (494)
370 3ic5_A Putative saccharopine d 94.9 0.028 9.4E-07 42.5 4.4 34 5-41 5-39 (118)
371 3fwz_A Inner membrane protein 94.8 0.045 1.6E-06 43.1 5.8 34 5-41 7-40 (140)
372 2g1u_A Hypothetical protein TM 94.8 0.034 1.2E-06 44.7 5.0 34 5-41 19-52 (155)
373 3oz2_A Digeranylgeranylglycero 94.8 0.027 9.2E-07 52.8 5.0 100 165-265 6-164 (397)
374 1lss_A TRK system potassium up 94.7 0.036 1.2E-06 43.4 4.9 32 6-40 5-36 (140)
375 3eag_A UDP-N-acetylmuramate:L- 94.5 0.047 1.6E-06 50.0 5.8 78 5-130 4-82 (326)
376 2iid_A L-amino-acid oxidase; f 94.4 0.042 1.4E-06 53.5 5.6 39 162-200 32-70 (498)
377 2vvm_A Monoamine oxidase N; FA 94.2 0.1 3.6E-06 50.6 8.0 36 6-44 40-75 (495)
378 3tl2_A Malate dehydrogenase; c 94.1 0.051 1.8E-06 49.3 5.0 38 1-40 4-41 (315)
379 3nrn_A Uncharacterized protein 94.1 0.054 1.9E-06 51.4 5.5 35 164-198 1-35 (421)
380 2hmt_A YUAA protein; RCK, KTN, 93.9 0.068 2.3E-06 41.9 4.9 34 5-41 6-39 (144)
381 4gx0_A TRKA domain protein; me 93.9 0.11 3.6E-06 51.6 7.4 170 3-201 125-386 (565)
382 4e12_A Diketoreductase; oxidor 93.9 0.063 2.2E-06 48.0 5.2 37 1-41 1-37 (283)
383 1vg0_A RAB proteins geranylger 93.8 0.19 6.7E-06 50.1 8.9 39 3-44 6-44 (650)
384 3ihm_A Styrene monooxygenase A 93.8 0.049 1.7E-06 52.0 4.6 34 163-196 22-55 (430)
385 3dfz_A SIRC, precorrin-2 dehyd 93.7 0.077 2.6E-06 45.4 5.1 107 162-299 30-141 (223)
386 2b9w_A Putative aminooxidase; 93.7 0.08 2.7E-06 50.3 5.8 61 162-223 5-82 (424)
387 2bcg_G Secretory pathway GDP d 93.7 0.11 3.8E-06 49.9 6.9 39 3-44 9-47 (453)
388 3ka7_A Oxidoreductase; structu 93.6 0.067 2.3E-06 50.8 5.2 34 165-198 2-35 (425)
389 3fwz_A Inner membrane protein 93.6 0.13 4.3E-06 40.4 6.0 79 163-265 7-85 (140)
390 3g5s_A Methylenetetrahydrofola 93.6 0.076 2.6E-06 49.5 5.2 33 164-196 2-34 (443)
391 2e1m_A L-glutamate oxidase; L- 93.6 0.081 2.8E-06 49.3 5.4 37 162-198 43-80 (376)
392 1d5t_A Guanine nucleotide diss 93.5 0.075 2.6E-06 50.8 5.3 40 2-44 3-42 (433)
393 2g1u_A Hypothetical protein TM 93.5 0.1 3.4E-06 41.9 5.3 36 162-197 18-53 (155)
394 3dme_A Conserved exported prot 93.4 0.072 2.5E-06 49.3 4.9 33 164-196 5-37 (369)
395 3dfz_A SIRC, precorrin-2 dehyd 93.3 0.09 3.1E-06 44.9 4.9 35 4-41 30-64 (223)
396 3i83_A 2-dehydropantoate 2-red 93.3 0.22 7.7E-06 45.3 7.9 83 164-268 3-88 (320)
397 3k7m_X 6-hydroxy-L-nicotine ox 93.2 0.083 2.8E-06 50.3 5.0 34 165-198 3-36 (431)
398 2jae_A L-amino acid oxidase; o 93.1 0.1 3.5E-06 50.6 5.7 37 163-199 11-47 (489)
399 2oln_A NIKD protein; flavoprot 93.1 0.087 3E-06 49.5 5.0 34 164-197 5-38 (397)
400 4hv4_A UDP-N-acetylmuramate--L 93.1 0.12 4.1E-06 50.3 6.0 77 162-268 21-98 (494)
401 3c85_A Putative glutathione-re 93.1 0.13 4.3E-06 42.5 5.4 33 6-41 40-73 (183)
402 3cgv_A Geranylgeranyl reductas 93.1 0.085 2.9E-06 49.4 4.9 35 164-198 5-39 (397)
403 3nix_A Flavoprotein/dehydrogen 93.0 0.084 2.9E-06 50.0 4.7 33 164-196 6-38 (421)
404 2gf3_A MSOX, monomeric sarcosi 92.9 0.094 3.2E-06 49.0 4.9 34 164-197 4-37 (389)
405 1y56_B Sarcosine oxidase; dehy 92.8 0.1 3.4E-06 48.7 5.0 34 163-196 5-38 (382)
406 1s3e_A Amine oxidase [flavin-c 92.8 0.1 3.6E-06 51.1 5.3 61 163-224 4-81 (520)
407 1rsg_A FMS1 protein; FAD bindi 92.7 0.099 3.4E-06 51.2 4.9 36 163-198 8-44 (516)
408 4gde_A UDP-galactopyranose mut 92.7 0.082 2.8E-06 51.5 4.3 36 165-200 12-48 (513)
409 1c0p_A D-amino acid oxidase; a 92.7 0.12 4E-06 48.0 5.1 33 163-195 6-38 (363)
410 2pyx_A Tryptophan halogenase; 92.7 0.07 2.4E-06 52.4 3.7 34 163-196 7-52 (526)
411 3l4b_C TRKA K+ channel protien 92.6 0.12 4.1E-06 44.1 4.8 32 7-41 2-33 (218)
412 1bg6_A N-(1-D-carboxylethyl)-L 92.6 0.11 3.9E-06 48.0 4.9 36 1-40 1-36 (359)
413 1f0y_A HCDH, L-3-hydroxyacyl-C 92.5 0.14 4.6E-06 46.3 5.2 34 5-41 15-48 (302)
414 2ivd_A PPO, PPOX, protoporphyr 92.5 0.11 3.9E-06 50.1 5.1 37 162-198 15-51 (478)
415 3pqe_A L-LDH, L-lactate dehydr 92.5 0.13 4.4E-06 46.9 5.0 39 1-40 1-39 (326)
416 1id1_A Putative potassium chan 92.5 0.19 6.5E-06 40.0 5.6 33 163-195 3-35 (153)
417 3hwr_A 2-dehydropantoate 2-red 92.4 0.26 8.9E-06 44.8 7.1 85 162-268 18-103 (318)
418 3k96_A Glycerol-3-phosphate de 92.4 0.15 5.1E-06 47.2 5.4 36 3-41 27-62 (356)
419 2x5o_A UDP-N-acetylmuramoylala 92.4 0.054 1.8E-06 51.9 2.4 77 162-267 4-80 (439)
420 3nyc_A D-arginine dehydrogenas 92.3 0.12 4E-06 48.2 4.7 35 163-198 9-43 (381)
421 2x5o_A UDP-N-acetylmuramoylala 92.3 0.11 3.7E-06 49.7 4.5 129 5-192 5-136 (439)
422 1y6j_A L-lactate dehydrogenase 92.3 0.16 5.6E-06 46.1 5.5 37 4-41 6-42 (318)
423 1sez_A Protoporphyrinogen oxid 92.1 0.15 5.2E-06 49.6 5.4 37 163-199 13-49 (504)
424 2bi7_A UDP-galactopyranose mut 92.1 0.15 5E-06 47.9 5.0 36 164-199 4-39 (384)
425 2a9f_A Putative malic enzyme ( 92.0 0.16 5.4E-06 47.0 4.9 36 5-42 188-223 (398)
426 2ewd_A Lactate dehydrogenase,; 91.9 0.16 5.6E-06 46.1 5.0 37 3-41 2-38 (317)
427 3dje_A Fructosyl amine: oxygen 91.9 0.16 5.4E-06 48.5 5.1 35 163-197 6-41 (438)
428 3nks_A Protoporphyrinogen oxid 91.9 0.27 9.1E-06 47.4 6.8 38 6-44 3-40 (477)
429 3mog_A Probable 3-hydroxybutyr 91.9 0.19 6.3E-06 48.6 5.5 38 1-41 1-38 (483)
430 2yg5_A Putrescine oxidase; oxi 91.9 0.16 5.6E-06 48.5 5.2 36 164-199 6-41 (453)
431 1vl6_A Malate oxidoreductase; 91.8 0.17 5.8E-06 46.8 4.9 37 5-43 192-228 (388)
432 3llv_A Exopolyphosphatase-rela 91.8 0.18 6.1E-06 39.5 4.5 33 163-195 6-38 (141)
433 3qha_A Putative oxidoreductase 91.7 0.13 4.5E-06 46.2 4.1 34 5-41 15-48 (296)
434 4huj_A Uncharacterized protein 91.7 0.11 3.9E-06 44.4 3.5 33 5-40 23-56 (220)
435 4dio_A NAD(P) transhydrogenase 91.7 0.18 6.2E-06 47.1 5.1 34 5-41 190-223 (405)
436 3hn2_A 2-dehydropantoate 2-red 91.7 0.28 9.7E-06 44.4 6.4 83 164-268 3-86 (312)
437 2i0z_A NAD(FAD)-utilizing dehy 91.7 0.17 5.8E-06 48.5 5.1 34 164-197 27-60 (447)
438 1kyq_A Met8P, siroheme biosynt 91.7 0.087 3E-06 46.6 2.7 34 5-41 13-46 (274)
439 2uyy_A N-PAC protein; long-cha 91.7 0.23 7.9E-06 45.0 5.7 37 2-41 27-63 (316)
440 3hdq_A UDP-galactopyranose mut 91.6 0.18 6.1E-06 47.4 5.0 36 163-198 29-64 (397)
441 2e4g_A Tryptophan halogenase; 91.6 0.2 6.7E-06 49.5 5.5 34 163-196 25-61 (550)
442 2gag_B Heterotetrameric sarcos 91.6 0.13 4.6E-06 48.2 4.2 33 164-196 22-56 (405)
443 1t2d_A LDH-P, L-lactate dehydr 91.5 0.21 7.1E-06 45.5 5.2 36 4-41 3-38 (322)
444 1pzg_A LDH, lactate dehydrogen 91.4 0.22 7.4E-06 45.6 5.2 34 5-41 9-43 (331)
445 1v0j_A UDP-galactopyranose mut 91.3 0.19 6.4E-06 47.4 4.9 36 163-198 7-43 (399)
446 3hn7_A UDP-N-acetylmuramate-L- 91.3 0.39 1.3E-05 47.0 7.3 79 162-268 18-97 (524)
447 3i83_A 2-dehydropantoate 2-red 91.3 0.2 6.9E-06 45.6 4.9 32 6-40 3-34 (320)
448 3ps9_A TRNA 5-methylaminomethy 91.3 0.2 6.8E-06 50.9 5.3 34 164-197 273-306 (676)
449 4ffl_A PYLC; amino acid, biosy 91.2 0.24 8.3E-06 45.9 5.5 34 6-42 2-35 (363)
450 1lss_A TRK system potassium up 91.2 0.27 9.3E-06 38.1 5.1 33 163-195 4-36 (140)
451 3pvc_A TRNA 5-methylaminomethy 91.2 0.19 6.6E-06 51.1 5.2 34 164-197 265-298 (689)
452 3g3e_A D-amino-acid oxidase; F 91.1 0.15 5.1E-06 47.0 3.9 32 165-196 2-39 (351)
453 3hn2_A 2-dehydropantoate 2-red 91.0 0.2 7E-06 45.3 4.6 32 6-40 3-34 (312)
454 3p2y_A Alanine dehydrogenase/p 91.0 0.2 6.8E-06 46.4 4.5 34 5-41 184-217 (381)
455 2hmt_A YUAA protein; RCK, KTN, 91.0 0.27 9.3E-06 38.3 4.8 34 162-195 5-38 (144)
456 3ic5_A Putative saccharopine d 90.8 0.25 8.5E-06 37.0 4.3 33 163-195 5-38 (118)
457 4e21_A 6-phosphogluconate dehy 90.8 0.23 8E-06 45.9 4.9 37 2-41 19-55 (358)
458 1i8t_A UDP-galactopyranose mut 90.8 0.2 7E-06 46.5 4.5 34 165-198 3-36 (367)
459 2dpo_A L-gulonate 3-dehydrogen 90.8 0.28 9.7E-06 44.5 5.3 34 5-41 6-39 (319)
460 2xag_A Lysine-specific histone 90.7 0.28 9.4E-06 50.9 5.8 36 163-198 278-313 (852)
461 3ado_A Lambda-crystallin; L-gu 90.7 0.22 7.5E-06 45.1 4.4 36 163-198 6-41 (319)
462 2z3y_A Lysine-specific histone 90.7 0.27 9.1E-06 49.8 5.5 37 162-198 106-142 (662)
463 1kyq_A Met8P, siroheme biosynt 90.6 0.2 6.9E-06 44.2 4.0 34 162-195 12-45 (274)
464 3ghy_A Ketopantoate reductase 90.5 0.31 1E-05 44.7 5.4 32 6-40 4-35 (335)
465 3ego_A Probable 2-dehydropanto 90.3 0.42 1.5E-05 43.1 6.1 72 165-259 4-75 (307)
466 3lov_A Protoporphyrinogen oxid 90.3 0.21 7.1E-06 48.2 4.2 35 163-197 4-40 (475)
467 2weu_A Tryptophan 5-halogenase 90.3 0.17 5.8E-06 49.4 3.7 33 164-196 3-38 (511)
468 1jw9_B Molybdopterin biosynthe 90.2 0.27 9.4E-06 42.8 4.6 36 5-42 31-66 (249)
469 3g17_A Similar to 2-dehydropan 90.2 0.27 9.1E-06 44.1 4.7 33 6-41 3-35 (294)
470 4ezb_A Uncharacterized conserv 90.1 0.43 1.5E-05 43.3 5.9 92 164-282 25-119 (317)
471 4dsg_A UDP-galactopyranose mut 89.8 0.37 1.3E-05 46.7 5.5 36 163-198 9-45 (484)
472 2ew2_A 2-dehydropantoate 2-red 89.8 0.32 1.1E-05 43.9 4.8 32 6-40 4-35 (316)
473 3orq_A N5-carboxyaminoimidazol 89.6 0.48 1.6E-05 44.2 6.0 36 4-42 11-46 (377)
474 1x13_A NAD(P) transhydrogenase 89.4 0.31 1E-05 45.9 4.5 34 5-41 172-205 (401)
475 3l9w_A Glutathione-regulated p 89.3 0.45 1.5E-05 44.9 5.5 34 5-41 4-37 (413)
476 2qyt_A 2-dehydropantoate 2-red 89.2 0.25 8.5E-06 44.7 3.6 32 5-39 8-45 (317)
477 1lld_A L-lactate dehydrogenase 89.2 0.38 1.3E-05 43.6 4.8 35 6-41 8-42 (319)
478 2izz_A Pyrroline-5-carboxylate 89.2 0.39 1.3E-05 43.7 4.9 37 4-40 21-58 (322)
479 2raf_A Putative dinucleotide-b 89.1 0.46 1.6E-05 40.1 5.0 35 5-42 19-53 (209)
480 1l7d_A Nicotinamide nucleotide 89.1 0.41 1.4E-05 44.7 5.1 34 5-41 172-205 (384)
481 3axb_A Putative oxidoreductase 89.0 0.22 7.6E-06 47.6 3.3 31 164-194 24-55 (448)
482 3da1_A Glycerol-3-phosphate de 88.9 0.36 1.2E-05 47.7 4.8 34 163-196 18-51 (561)
483 3g0o_A 3-hydroxyisobutyrate de 88.9 0.42 1.4E-05 43.0 4.9 34 5-41 7-40 (303)
484 3qsg_A NAD-binding phosphogluc 88.9 0.36 1.2E-05 43.7 4.4 34 4-40 23-57 (312)
485 3dhn_A NAD-dependent epimerase 88.9 0.31 1.1E-05 41.5 3.9 34 5-41 4-38 (227)
486 3ado_A Lambda-crystallin; L-gu 88.9 0.48 1.6E-05 42.9 5.2 34 5-41 6-39 (319)
487 3q2o_A Phosphoribosylaminoimid 88.8 0.57 2E-05 43.8 6.0 35 5-42 14-48 (389)
488 3c85_A Putative glutathione-re 88.8 0.45 1.5E-05 39.1 4.6 33 163-195 39-72 (183)
489 3nv9_A Malic enzyme; rossmann 88.7 0.48 1.7E-05 44.5 5.1 40 5-44 219-258 (487)
490 3g79_A NDP-N-acetyl-D-galactos 88.7 0.34 1.2E-05 46.6 4.3 35 5-42 18-54 (478)
491 3gpi_A NAD-dependent epimerase 88.7 0.59 2E-05 41.4 5.7 33 6-41 4-36 (286)
492 1b37_A Protein (polyamine oxid 88.6 0.55 1.9E-05 45.2 5.8 38 3-43 2-40 (472)
493 3gg2_A Sugar dehydrogenase, UD 88.5 0.44 1.5E-05 45.6 4.9 33 6-41 3-35 (450)
494 3d0o_A L-LDH 1, L-lactate dehy 88.4 0.58 2E-05 42.4 5.4 36 4-40 5-40 (317)
495 1evy_A Glycerol-3-phosphate de 88.4 0.24 8.1E-06 46.0 2.9 32 7-41 17-48 (366)
496 1ur5_A Malate dehydrogenase; o 88.3 0.5 1.7E-05 42.7 5.0 34 6-41 3-36 (309)
497 1pjc_A Protein (L-alanine dehy 88.3 0.47 1.6E-05 43.9 4.9 33 6-41 168-200 (361)
498 3phh_A Shikimate dehydrogenase 88.3 0.57 2E-05 41.2 5.1 33 6-41 119-151 (269)
499 3enk_A UDP-glucose 4-epimerase 88.2 0.56 1.9E-05 42.8 5.3 38 1-41 1-39 (341)
500 1pj5_A N,N-dimethylglycine oxi 88.1 0.44 1.5E-05 49.6 5.1 35 163-197 4-39 (830)
No 1
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.6e-56 Score=434.30 Aligned_cols=401 Identities=30% Similarity=0.498 Sum_probs=346.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+++||||||||+||++||.+|+++|+ +.+|+|||+++..+|.++.+++.++....... .......+++.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~----------~~~~~~~~~~~ 76 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGF-EGRVLVIGREPEIPYERPPLSKEYLAREKTFE----------RICIRPAQFWE 76 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC-CSCEEEEESSSSCCBCSGGGGTTTTTTSSCSG----------GGBSSCHHHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHccCc-CCCEEEEecCCCCCcCcccCCHHHHcCCCCHH----------HhccCCHHHHH
Confidence 46899999999999999999999986 45699999999999998887766554321110 01245678888
Q ss_pred HCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCC
Q 013890 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKN 163 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~ 163 (434)
+.+++++.++++..+++..+.+.+.++..+.||+||+|||++|+.|+ ++|.+..+++++++..++..+...+.. .+
T Consensus 77 ~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~---i~g~~~~~v~~~~~~~d~~~l~~~~~~-~~ 152 (415)
T 3lxd_A 77 DKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLS---CVGADLAGVHAVRTKEDADRLMAELDA-GA 152 (415)
T ss_dssp HTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCB---TTSSCCBTEECCCSHHHHHHHHHHHHT-TC
T ss_pred HCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCC---CCCccccCEEEEcCHHHHHHHHHHhhh-cC
Confidence 99999999999999999999999999999999999999999999887 577677889999999999988877652 27
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVK 243 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~ 243 (434)
++++|||+|++|+|+|..+.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||++++++.|+++.. +++.+..|.
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~ 231 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVR 231 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEE
Confidence 8999999999999999999999999999999999998778999999999999999999999999999987 456777899
Q ss_pred eCCCcEEEcCEEEEccCCccChhhhhc-cccccCCcEEeCCCCCCCCCceEEeccccccccccc-CcccccccHHHHHHH
Q 013890 244 LKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLY-REMRRVEHVDHARKS 321 (434)
Q Consensus 244 ~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~-~~~~~~~~~~~A~~~ 321 (434)
+++|+++++|.||+|+|++|++++++. ++..++ +|.||+++||++|+|||+|||+..+.... +.+.++++|..|..|
T Consensus 232 l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~-gi~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~q 310 (415)
T 3lxd_A 232 MQDGSVIPADIVIVGIGIVPCVGALISAGASGGN-GVDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDM 310 (415)
T ss_dssp ESSSCEEECSEEEECSCCEESCHHHHHTTCCCSS-SEECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHH
T ss_pred eCCCCEEEcCEEEECCCCccChHHHHhCCCCcCC-CEEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHH
Confidence 999999999999999999999988754 555554 59999999999999999999999887655 777788899999999
Q ss_pred HHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC--cEEEEcCCCccccCCcEEEEEEeCCEEEEEEEecC
Q 013890 322 AEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESG 399 (434)
Q Consensus 322 g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~~g~ 399 (434)
|+.||+||++.. ..|..+|++|+.++++.+..+|...+ +.+..++.. ...|.++++++|+|+|+.++|
T Consensus 311 g~~aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~- 380 (415)
T 3lxd_A 311 ATAAAKDICGAP-----VPYKATPWFWSNQYDLKLQTVGLSTGHDNAVLRGDPA----TRSFSVVYLKGGKVVALDCVN- 380 (415)
T ss_dssp HHHHHHHHTTCC-----CCCCCCCEEEEEETTEEEEEEECCTTCSEEEEEEEGG----GTEEEEEEEETTEEEEEEEES-
T ss_pred HHHHHHHhcCCC-----CCCCCCCeeEeeeCCcEEEEEeCCCCCCEEEEEecCC----CCeEEEEEEECCEEEEEEEEC-
Confidence 999999999753 57889999999999999999998753 344445443 567999999999999999998
Q ss_pred ChHHHHHHHHHHHcCCCCCChhhhhccCCCccc
Q 013890 400 TPEENKAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 400 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 432 (434)
.+.+...+..+|+++.++ +.+.|.+|.++..+
T Consensus 381 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~~ 412 (415)
T 3lxd_A 381 MVKDYVQGKKLVEARAQI-APEQLADAGVPLKE 412 (415)
T ss_dssp CHHHHHHHHHHHHHTCCC-CHHHHTCTTSCGGG
T ss_pred ChHHHHHHHHHHHCCCCC-CHHHhcCCCCChHH
Confidence 577888899999999988 57899999887643
No 2
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=2.2e-56 Score=432.01 Aligned_cols=395 Identities=25% Similarity=0.395 Sum_probs=339.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHHC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
+||+|||||+||++||.+|+++|+ +.+|+|||+++..+|.++++++.++........ . ....+++.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~-~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~----------~-~~~~~~~~~~ 70 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGF-EGRISLIGDEPHLPYDRPSLSKAVLDGSLERPP----------I-LAEADWYGEA 70 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCC----------B-SSCTTHHHHT
T ss_pred CCEEEEcccHHHHHHHHHHHccCc-CCeEEEEECCCCCCcCCccccHHHhCCCCCHHH----------h-cCCHHHHHHC
Confidence 599999999999999999999986 567999999999999988887765533221110 0 2345788889
Q ss_pred CcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCc
Q 013890 86 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGK 165 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~ 165 (434)
+++++.+++++.+++..+++.+.+++++.||+||+|||++|+.|+ ++|.+.++++++++..++..+.+.+. .+++
T Consensus 71 ~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~---ipG~~~~~v~~~~~~~d~~~l~~~~~--~~~~ 145 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRARTMA---LPGSQLPGVVTLRTYGDVQVLRDSWT--SATR 145 (410)
T ss_dssp TCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCC---CTTTTSTTEECCCSHHHHHHHHHHCC--TTCE
T ss_pred CCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCcccCCC---CCCccccceEEeccHHHHHHHHHHhc--cCCe
Confidence 999999999999999999999999999999999999999999887 57777788999999999988877554 5789
Q ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeC
Q 013890 166 AVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLK 245 (434)
Q Consensus 166 vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~ 245 (434)
++|||+|++|+|+|..+.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||++++++.|++++. ++.+..|.++
T Consensus 146 vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~ 223 (410)
T 3ef6_A 146 LLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMAS 223 (410)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEET
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEEC
Confidence 99999999999999999999999999999999887768999999999999999999999999999987 4455678999
Q ss_pred CCcEEEcCEEEEccCCccChhhhhc-cccccCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHH
Q 013890 246 DGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQ 324 (434)
Q Consensus 246 ~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~ 324 (434)
+|+++++|.||+|+|++|++++++. ++..+ ++|.||+++||++|+|||+|||+..+... +.+.++++|..|..||+.
T Consensus 224 dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~ 301 (410)
T 3ef6_A 224 DGRSFVADSALICVGAEPADQLARQAGLACD-RGVIVDHCGATLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAA 301 (410)
T ss_dssp TSCEEECSEEEECSCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHH
T ss_pred CCCEEEcCEEEEeeCCeecHHHHHhCCCccC-CeEEEccCeeECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHH
Confidence 9999999999999999999988754 56556 55999999999999999999999987654 666677899999999999
Q ss_pred HHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC--cEEEEcCCCccccCCcEEEEEEeCCEEEEEEEecCChH
Q 013890 325 AVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPE 402 (434)
Q Consensus 325 aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~~g~~~~ 402 (434)
||+||++.. ..|..+|++|+.++++.+..+|...+ +.+..++.. ...|.++++++|+|+|++++| .+.
T Consensus 302 aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~g~~~~~-~~~ 371 (410)
T 3ef6_A 302 VAAAILGKN-----VSAPQLPVSWTEIAGHRMQMAGDIEGPGDFVSRGMPG----SGAALLFRLQERRIQAVVAVD-APR 371 (410)
T ss_dssp HHHHHTTCC-----CCCCBCCEEEEEETTEEEEEESCSSSSSEEEEESCTT----SSSEEEEEEETTEEEEEEEES-CHH
T ss_pred HHHHHcCCC-----CCCCCCCeeEEEECCceEEEEcCCCCCCEEEEEeeCC----CCeEEEEEEECCEEEEEEEEC-ChH
Confidence 999999753 57888999999999999999998763 344555544 556899999999999999998 478
Q ss_pred HHHHHHHHHHcCCCCCChhhhhccCCCccc
Q 013890 403 ENKAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 403 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 432 (434)
+...+..+|+++..+ +.+.|.++.++..+
T Consensus 372 ~~~~~~~~i~~~~~~-~~~~l~~~~~~l~~ 400 (410)
T 3ef6_A 372 DFALATRLVEARAAI-EPARLADLSNSMRD 400 (410)
T ss_dssp HHHHHHHHHHHTCBC-CHHHHHCTTSCGGG
T ss_pred HHHHHHHHHhCCCCC-CHHHhcCCCCCHHH
Confidence 888899999999888 56889999988654
No 3
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.3e-55 Score=426.18 Aligned_cols=396 Identities=29% Similarity=0.459 Sum_probs=342.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHHC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
+||+|||||+||++||.+|+++|+ +.+|+|||+++..+|.++++++.++....... .......+++.+.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~----------~~~~~~~~~~~~~ 70 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKY-PGRIALINDEKHLPYQRPPLSKAYLKSGGDPN----------SLMFRPEKFFQDQ 70 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CSCEEEECCSSSSSBCSGGGGTGGGGSCCCTT----------SSBSSCHHHHHHT
T ss_pred CCEEEEcChHHHHHHHHHHHhhCc-CCCEEEEeCCCCCCCCCccCCHHHHCCCCCHH----------HccCCCHHHHHhC
Confidence 689999999999999999999987 34599999999999998888776654332111 0124567888899
Q ss_pred CcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCc
Q 013890 86 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGK 165 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~ 165 (434)
+++++. ++++.++++.+.+.+.++.++.||+||+|||++|+.|+ ++|.+..+++++++..++..+...+. .+++
T Consensus 71 ~i~~~~-~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~---i~g~~~~~v~~~~~~~d~~~l~~~~~--~~~~ 144 (404)
T 3fg2_P 71 AIELIS-DRMVSIDREGRKLLLASGTAIEYGHLVLATGARNRMLD---VPNASLPDVLYLRTLDESEVLRQRMP--DKKH 144 (404)
T ss_dssp TEEEEC-CCEEEEETTTTEEEESSSCEEECSEEEECCCEEECCCC---STTTTSTTEECCSSHHHHHHHHHHGG--GCSE
T ss_pred CCEEEE-EEEEEEECCCCEEEECCCCEEECCEEEEeeCCCccCCC---CCCCCCCcEEEECCHHHHHHHHHHhh--cCCe
Confidence 999999 79999999999999999999999999999999998887 57767788999999999988877665 4789
Q ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeC
Q 013890 166 AVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLK 245 (434)
Q Consensus 166 vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~ 245 (434)
++|||+|++|+|+|..+.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||++++++.|+++.. +++.+..|.++
T Consensus 145 vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~V~~~ 223 (404)
T 3fg2_P 145 VVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAA-EGDRVTGVVLS 223 (404)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEET
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEe-cCCcEEEEEeC
Confidence 99999999999999999999999999999999998778999999999999999999999999999987 35677789999
Q ss_pred CCcEEEcCEEEEccCCccChhhhhc-cccccCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHH
Q 013890 246 DGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQ 324 (434)
Q Consensus 246 ~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~ 324 (434)
+|+++++|.||+|+|++|++++++. ++..++| |.||+++||++|+|||+|||+..+....+.+.++++|..|..||+.
T Consensus 224 dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~G-i~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~ 302 (404)
T 3fg2_P 224 DGNTLPCDLVVVGVGVIPNVEIAAAAGLPTAAG-IIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARC 302 (404)
T ss_dssp TSCEEECSEEEECCCEEECCHHHHHTTCCBSSS-EEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHH
T ss_pred CCCEEEcCEEEECcCCccCHHHHHhCCCCCCCC-EEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHH
Confidence 9999999999999999999988754 5665644 9999999999999999999999887666777778899999999999
Q ss_pred HHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC--cEEEEcCCCccccCCcEEEEEEeCCEEEEEEEecCChH
Q 013890 325 AVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPE 402 (434)
Q Consensus 325 aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~~g~~~~ 402 (434)
||+||++.. ..|..+|++|+.++++.+..+|...+ +.+..++.. ...|.++++++|+|+|+.++| .+.
T Consensus 303 aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~-~~~ 372 (404)
T 3fg2_P 303 VAARLTGDA-----KPYDGYPWFWSDQGDDKLQIVGLTAGFDQVVIRGSVA----ERSFSAFCYKAGKLIGIESVN-RAA 372 (404)
T ss_dssp HHHHTTTCC-----CCCCCCCEEEEEETTEEEEEEECCTTCCEEEEEEETT----TTEEEEEEEETTEEEEEEEES-CHH
T ss_pred HHHHhCCCC-----CCCCCCCceEeEECCcEEEEEeCCCCCCEEEEEecCC----CCcEEEEEEECCEEEEEEEeC-CHH
Confidence 999999753 57889999999999999999998653 344455543 567999999999999999998 578
Q ss_pred HHHHHHHHHHcCCCCCChhhhhccCCCcc
Q 013890 403 ENKAIAKVARVQPSVESLDVLKNEGLSFA 431 (434)
Q Consensus 403 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 431 (434)
+...+..+|+++.++ +.+.|.+|++++.
T Consensus 373 ~~~~~~~~~~~~~~~-~~~~l~~~~~~~~ 400 (404)
T 3fg2_P 373 DHVFGRKILPLDKSV-TPEQAADLSFDLK 400 (404)
T ss_dssp HHHHHHHHTTTTCCC-CHHHHHCTTSCHH
T ss_pred HHHHHHHHHHcCCCC-CHHHhcCCCCChH
Confidence 888899999999888 5789999988764
No 4
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2.7e-56 Score=433.87 Aligned_cols=401 Identities=18% Similarity=0.232 Sum_probs=319.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHHCC
Q 013890 7 KYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKG 86 (434)
Q Consensus 7 dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (434)
+|||||||+||++||.+|++.|. +.+|+|||+++..+|.+|+++..+..... .... .......+++++.+
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~ 71 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDK-ESDIIIFEKDRDMSFANCALPYVIGEVVE-DRRY--------ALAYTPEKFYDRKQ 71 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCS-SSCEEEEESSSCSSBCGGGHHHHHTTSSC-CGGG--------TBCCCHHHHHHHHC
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CCcEEEEeCCCCCCCCcchhHHHHcCCcc-chhh--------hhhcCHHHHHHhcC
Confidence 69999999999999999999884 45699999999888887766432211100 0000 00123456778889
Q ss_pred cEEEcCCeEEEEeCCCCEEEcCC-----CcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhc
Q 013890 87 IELILSTEIVRADIASKTLLSAT-----GLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAK 161 (434)
Q Consensus 87 v~~~~~~~v~~i~~~~~~v~~~~-----~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~ 161 (434)
++++.+++|+.++.+.+.+.+.+ +.++.||+||||||++|+.|+ +++ .+++..++..++..+.+.+...
T Consensus 72 i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~---i~g---~~~~~~~~~~~~~~l~~~~~~~ 145 (437)
T 4eqs_A 72 ITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLG---FES---DITFTLRNLEDTDAIDQFIKAN 145 (437)
T ss_dssp CEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCC---CCC---TTEECCSSHHHHHHHHHHHHHH
T ss_pred CEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccccc---ccC---ceEEeeccHHHHHHHHHhhhcc
Confidence 99999999999999998776532 246899999999999998776 454 5688889999999998887766
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEE
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNE 241 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~ 241 (434)
.+++++|||+|++|+|+|..+.++|.+|+++++.+++++. +++++.+.+.+.++++||++++++.|++++. ..
T Consensus 146 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~-~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~------~~ 218 (437)
T 4eqs_A 146 QVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYRLNEEINAING------NE 218 (437)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-SCGGGGHHHHHHHHHTTCCEEESCCEEEEET------TE
T ss_pred CCcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-ccchhHHHHHHHhhccceEEEeccEEEEecC------Ce
Confidence 7899999999999999999999999999999999999886 7999999999999999999999999999865 24
Q ss_pred EEeCCCcEEEcCEEEEccCCccChhhhhc-cccc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHH
Q 013890 242 VKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHAR 319 (434)
Q Consensus 242 v~~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~ 319 (434)
+.+++|+++++|.|++|+|++||+++++. ++.. .+|+|.||+++||++|||||+|||+..++...+.+.+.+++..|.
T Consensus 219 v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~ 298 (437)
T 4eqs_A 219 ITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAH 298 (437)
T ss_dssp EEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHH
T ss_pred eeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhHHHHH
Confidence 78899999999999999999999998854 5666 678899999999999999999999999887777777778999999
Q ss_pred HHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCCcE-------EE--EcCCCc--cccCCcEEEEEE--
Q 013890 320 KSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGDT-------VL--FGDNDL--ASATHKFGTYWI-- 386 (434)
Q Consensus 320 ~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~-------~~--~~~~~~--~~~~~~~~~~~~-- 386 (434)
+||+++|+||++.... ...+.++..+..+.+..+..+|+++.+. .. ...... ..++++|+|+++
T Consensus 299 ~~g~~~a~ni~g~~~~---~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~d~ 375 (437)
T 4eqs_A 299 RAASIVAEQIAGNDTI---EFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDT 375 (437)
T ss_dssp HHHHHHHHHHHSCTTC---CCCCBCCCEEEEETTEEEEEEESCGGGGGGSCEEEEEEEEESSCTTSSSCCEEEEEEEEET
T ss_pred HHHHHHHHHHcCCCCc---ccccceeEEeeeeccceEEEeeCCHHHHHhCCceEEEEecCCchhhcCCCCcEEEEEEEEC
Confidence 9999999999986432 1223333334444555556668876321 11 111111 134677899887
Q ss_pred eCCEEEEEEEecCC-hHHH-HHHHHHHHcCCCCCChhhhhcc-CCCcccc
Q 013890 387 KDGKVVGVFLESGT-PEEN-KAIAKVARVQPSVESLDVLKNE-GLSFASK 433 (434)
Q Consensus 387 ~~~~ilG~~~~g~~-~~~~-~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~ 433 (434)
++++|||+|++|++ ++|+ +.++.||++++|++||..+.-. .++|.+.
T Consensus 376 ~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~~ 425 (437)
T 4eqs_A 376 SNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSHP 425 (437)
T ss_dssp TTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCS
T ss_pred CCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCch
Confidence 57999999999975 7776 9999999999999999887443 5777653
No 5
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=3.8e-54 Score=418.61 Aligned_cols=400 Identities=26% Similarity=0.423 Sum_probs=329.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+.+||+|||||+||+++|..|+++|+ +.+|+|||+++..+|.++.+++.++....... . ......++++
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~--~--------~~~~~~~~~~ 71 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGW-EGNIRLVGDATVIPHHLPPLSKAYLAGKATAE--S--------LYLRTPDAYA 71 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSCCSCCBCSGGGGTTTTTTCSCSG--G--------GBSSCHHHHH
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCc-CCCEEEEECCCCCCCcCCCCcHHHhCCCCChH--H--------hcccCHHHHH
Confidence 35899999999999999999999986 34599999998888888777665553221100 0 0124467888
Q ss_pred HCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCC---EEEEeCHHHHHHHHHHHHh
Q 013890 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKN---IFYLREIDDADKLVEAIKA 160 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~---v~~~~~~~~~~~l~~~l~~ 160 (434)
+.+++++.++.|+.++.+.++|.+.+++++.||+||+|||++|..|+ ++|.+..+ ++++++.+++..+.+.+.
T Consensus 72 ~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~---i~G~~~~~~~~v~~~~~~~d~~~l~~~l~- 147 (431)
T 1q1r_A 72 AQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLP---VASGAVGKANNFRYLRTLEDAECIRRQLI- 147 (431)
T ss_dssp HTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCG---GGTTHHHHSTTEEESSSHHHHHHHHHTCC-
T ss_pred hCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCccCCC---CCCcccCCCceEEEECCHHHHHHHHHHhh-
Confidence 89999999999999999889999888889999999999999998887 45544334 888889998887766543
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEec-CCCcE
Q 013890 161 KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN-ADGEV 239 (434)
Q Consensus 161 ~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~-~~g~~ 239 (434)
.+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||++++++.+.++... +++.+
T Consensus 148 -~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v 226 (431)
T 1q1r_A 148 -ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKV 226 (431)
T ss_dssp -TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCE
T ss_pred -cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcE
Confidence 4789999999999999999999999999999999998887789999999999999999999999999999862 34666
Q ss_pred EEEEeCCCcEEEcCEEEEccCCccChhhhhc-cccccCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHH
Q 013890 240 NEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHA 318 (434)
Q Consensus 240 ~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A 318 (434)
..+.+++|+++++|.||+|+|++|++++++. ++..++ +|.||+++||+.|+|||+|||+..+...++.+.+++++..|
T Consensus 227 ~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~-gi~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A 305 (431)
T 1q1r_A 227 TAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVDN-GIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNA 305 (431)
T ss_dssp EEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSS-SEECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHH
T ss_pred EEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCCC-CEEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHH
Confidence 6888999999999999999999999987754 565554 59999999999999999999999876555666667899999
Q ss_pred HHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCCc--EEEEcCCCccccCCcEEEEEEeCCEEEEEEE
Q 013890 319 RKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD--TVLFGDNDLASATHKFGTYWIKDGKVVGVFL 396 (434)
Q Consensus 319 ~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~ 396 (434)
..||+.||.||++.. ..|..+|++|+..+++.+..+|..+.. .+..++.. ...|.+++.++|+|+|+++
T Consensus 306 ~~qg~~aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~G~~~ 376 (431)
T 1q1r_A 306 LEQARKIAAILCGKV-----PRDEAAPWFWSDQYEIGLKMVGLSEGYDRIIVRGSLA----QPDFSVFYLQGDRVLAVDT 376 (431)
T ss_dssp HHHHHHHHHHHTTCC-----CCCCCCCEEEEEETTEEEEEEECCTTCSEEEEEEETT----TTEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHhcCCC-----CCCCCCCeEEEEECCceEEEEeCCCCCCEEEEEccCC----CCeEEEEEEeCCEEEEEEE
Confidence 999999999999753 467789999999999999888976532 33333322 4467888889999999999
Q ss_pred ecCChHHHHHHHHHHHcCCCCCChhhhhccCCCcc
Q 013890 397 ESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFA 431 (434)
Q Consensus 397 ~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 431 (434)
+|+. .+...+..+|..+.++ +.+.|.++.+++.
T Consensus 377 ~g~~-~~~~~~~~~i~~~~~~-~~~~l~~~~~~~~ 409 (431)
T 1q1r_A 377 VNRP-VEFNQSKQIITDRLPV-EPNLLGDESVPLK 409 (431)
T ss_dssp ESCH-HHHHHHHHHHHTTCCC-CHHHHTCTTSCHH
T ss_pred ECCh-HHHHHHHHHHHCCCCC-CHHHhhCCCCCHH
Confidence 9964 5566677788888877 5568888887764
No 6
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=8e-54 Score=413.61 Aligned_cols=392 Identities=27% Similarity=0.428 Sum_probs=321.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+++||+|||||+||+++|..|++.|. +.+|+|||+++..+|.++.+++.++....... .... ++.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~-~~~ 70 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGY-QGLITVVGDEAERPYDRPPLSKDFMAHGDAEK-------------IRLD-CKR 70 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTC-CSCEEEEESSCSCCBCSGGGGTHHHHHCCGGG-------------SBCC-CTT
T ss_pred CCCcEEEECChHHHHHHHHHHHccCC-CCeEEEEECCCCCcccCCCCCHHHhCCCchhh-------------hhHH-HHH
Confidence 36899999999999999999999986 34599999999888887766654442211100 0111 456
Q ss_pred HCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCC-CCCCCCCEEEEeCHHHHHHHHHHHHhcC
Q 013890 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGV-EGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i-~g~~~~~v~~~~~~~~~~~l~~~l~~~~ 162 (434)
+.+++++.+++|+.++++.++|.+.++.++.||+||+|||++|..|+ + +|.+ ++++++++.+++..+.+.+. .
T Consensus 71 ~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~---i~~G~~-~~v~~~~~~~~~~~l~~~~~--~ 144 (408)
T 2gqw_A 71 APEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALP---TLQGAT-MPVHTLRTLEDARRIQAGLR--P 144 (408)
T ss_dssp SCSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCG---GGTTCS-SCEEECCSHHHHHHHHTTCC--T
T ss_pred HCCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCC---ccCCCC-CcEEEECCHHHHHHHHHHhh--c
Confidence 77999999988999999889999988889999999999999998887 4 6655 78999999998887765443 4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEV 242 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v 242 (434)
+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||++++++.+.+++ ++ .|
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~---~~---~v 218 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV---DG---VV 218 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE---TT---EE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE---CC---EE
Confidence 7899999999999999999999999999999999998866899999999999999999999999999997 23 57
Q ss_pred EeCCCcEEEcCEEEEccCCccChhhhhc-cccccCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHH
Q 013890 243 KLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKS 321 (434)
Q Consensus 243 ~~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~ 321 (434)
.+++|+++++|.||+|+|++|++++++. ++..++| |.||+++||++|+|||+|||+..+....+.+.+++++..|..|
T Consensus 219 ~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~g-i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~ 297 (408)
T 2gqw_A 219 LLDDGTRIAADMVVVGIGVLANDALARAAGLACDDG-IFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQ 297 (408)
T ss_dssp EETTSCEEECSEEEECSCEEECCHHHHHHTCCBSSS-EECCTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHH
T ss_pred EECCCCEEEcCEEEECcCCCccHHHHHhCCCCCCCC-EEECCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHH
Confidence 7889999999999999999999987754 5665544 9999999999999999999999876545555556789999999
Q ss_pred HHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCC-CcEEEEcCCCccccCCcEEEEEEeCCEEEEEEEecCC
Q 013890 322 AEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-GDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGT 400 (434)
Q Consensus 322 g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~~g~~ 400 (434)
|+.||.||.+... ..|..+|++|++++++.+..+|... .+.+..++.. ....+|.+++.++|+|+|++++|+
T Consensus 298 g~~aa~~i~g~~~----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~G~~~~g~- 370 (408)
T 2gqw_A 298 GIAVARHLVDPTA----PGYAELPWYWSDQGALRIQVAGLASGDEEIVRGEVS--LDAPKFTLIELQKGRIVGATCVNN- 370 (408)
T ss_dssp HHHHHHHHHCTTS----CCCCCCCEEEEEETTEEEEEEECSCCSEEEEESCCC--SSSCCEEEEEEETTEEEEEEEESC-
T ss_pred HHHHHHHhcCCCC----CcCCCCCeEEEEECCceEEEECCCCCCEEEEEccCC--CCCCeEEEEEEeCCEEEEEEEECC-
Confidence 9999999997531 2678899999999999998889721 2233333311 113568888889999999999995
Q ss_pred hHHHHHHHHHHHcCCCCCChhhhhccCCCcc
Q 013890 401 PEENKAIAKVARVQPSVESLDVLKNEGLSFA 431 (434)
Q Consensus 401 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 431 (434)
..++..+..+|+++.++ +...|.++.+++.
T Consensus 371 ~~~~~~~~~~i~~~~~~-~~~~l~~~~~~~~ 400 (408)
T 2gqw_A 371 ARDFAPLRRLLAVGAKP-DRAALADPATDLR 400 (408)
T ss_dssp HHHHHHHHHHHHTTCCC-CHHHHHCTTCCHH
T ss_pred hHHHHHHHHHHHCCCCC-ChHHhcCCCCCHH
Confidence 46678999999999988 4567888887753
No 7
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=2.8e-54 Score=422.77 Aligned_cols=404 Identities=17% Similarity=0.219 Sum_probs=313.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHHC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
+||+|||||+||++||.+|++++ +..+|+|||+++..+|..+.+... +... ..... .......+++.+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~-~g~~V~vie~~~~~g~~~~~~~~~-~~~~-~~~~~--------~~~~~~~~~~~~~ 71 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY-PQAEISLIDKQATVGYLSGGLSAY-FNHT-INELH--------EARYITEEELRRQ 71 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC-SSSEEEEECSSSCCSSCCC--------------------------CCCCHHHHHHT
T ss_pred CCEEEECCCHHHHHHHHHHHhhC-cCCcEEEEECCCCCcccCccchhh-hcCC-CCCHH--------HhhcCCHHHHHHC
Confidence 69999999999999999999982 123499999998877654433211 1000 00000 0113366888899
Q ss_pred CcEEEcCCeEEEEeCCCCEEEc---CCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcC
Q 013890 86 GIELILSTEIVRADIASKTLLS---ATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~---~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~ 162 (434)
+++++.+++|+.++++.+.+.+ .++.++.||++|+|||++|..|+ ++|.+..++++++++.+...+.+... .
T Consensus 72 gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~---i~g~~~~~v~~~~~~~~~~~~~~~~~--~ 146 (452)
T 3oc4_A 72 KIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQ---IRGSQTEKLLKYKFLSGALAAVPLLE--N 146 (452)
T ss_dssp TEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCC---CBTTTCTTEEEGGGCC----CCHHHH--T
T ss_pred CCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCC---CCCCCCCCEEEeCCHHHHHHHHHHHh--c
Confidence 9999999999999999988765 25568999999999999999888 57777788998887777666555444 5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEV 242 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v 242 (434)
+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||++++++.|++++. +++.+ .+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v 224 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEE-TANGI-VL 224 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEE-CSSCE-EE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEc-cCCeE-EE
Confidence 89999999999999999999999999999999999998768999999999999999999999999999986 34455 67
Q ss_pred EeCCCcEEEcCEEEEccCCccChhhhhccccc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHH
Q 013890 243 KLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKS 321 (434)
Q Consensus 243 ~~~~g~~i~~d~vv~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~ 321 (434)
.++++ ++++|.|++|+|++|++++++..+.. .+|+|.||+++||++|+|||+|||+..+....+...+.+++..|..|
T Consensus 225 ~~~~g-~i~aD~Vv~A~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~ 303 (452)
T 3oc4_A 225 ETSEQ-EISCDSGIFALNLHPQLAYLDKKIQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRT 303 (452)
T ss_dssp EESSC-EEEESEEEECSCCBCCCSSCCTTSCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHH
T ss_pred EECCC-EEEeCEEEECcCCCCChHHHHhhhccCCCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHH
Confidence 78777 89999999999999999988665555 67899999999999999999999999876555555555789999999
Q ss_pred HHHHHHHHhccCCCCcccCCC-CCCeeEEeecCcceEEeecCCCcE------E---EEc--CCCccccCCcEEEEEE--e
Q 013890 322 AEQAVKTIMATEGGKTVTGYD-YLPYFYSRAFDLSWQFYGDNVGDT------V---LFG--DNDLASATHKFGTYWI--K 387 (434)
Q Consensus 322 g~~aa~~i~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~G~~~~~~------~---~~~--~~~~~~~~~~~~~~~~--~ 387 (434)
|+.||.||++... .+. ..+...+.+|+..+..+|+++.+. + .+. .......+.+|+|+++ +
T Consensus 304 g~~aa~~i~g~~~-----~~~~~~~~~~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~kli~~~~ 378 (452)
T 3oc4_A 304 GLVVANNLEEKTH-----RFIGSLRTMGTKVGDYYLASTGLTETEGLFFPQTLASIIVRQPAPPLQHGTEILGKLIYDKV 378 (452)
T ss_dssp HHHHTTSSSSCCC-----CCCCCCCCEEEEETTEEEEEEECCSGGGGGSSSCEEEEEEEEECTTTTCSCEEEEEEEEETT
T ss_pred HHHHHHHhcCCCc-----cCCCccccEEEEEcCeeEEEecCCHHHHHHCCCceEEEEEecCCccCCCCCeEEEEEEEECC
Confidence 9999999987532 222 223344556666777789876321 1 111 1111123568999888 4
Q ss_pred CCEEEEEEEecC-ChHHH-HHHHHHHHcCCCCCChhhh-hccCCCcccc
Q 013890 388 DGKVVGVFLESG-TPEEN-KAIAKVARVQPSVESLDVL-KNEGLSFASK 433 (434)
Q Consensus 388 ~~~ilG~~~~g~-~~~~~-~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~ 433 (434)
+++|||+|++|+ +++|+ +.++.||++++|++||..+ .-+.++|++.
T Consensus 379 ~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~ 427 (452)
T 3oc4_A 379 TQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTNI 427 (452)
T ss_dssp TCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSCS
T ss_pred CCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCCc
Confidence 699999999998 68886 9999999999999999988 6788988875
No 8
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=4.9e-54 Score=423.55 Aligned_cols=414 Identities=23% Similarity=0.272 Sum_probs=303.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCC-CCCCCCcceecCCCCCCCCHhHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEG-TARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
++||+|||||+||++||..|++++ +..+|+|||+++..+|.++.++..+..... ...+..+.. ......+++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~-~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~ 76 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD-PEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPY-----NVVRDPEFFR 76 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC-TTSEEEEECCC--------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC-cCCCEEEEECCCcccccccccchhhcCCCCchHHhccccc-----hhccCHHHHh
Confidence 479999999999999999999982 123499999999887766543321100000 000000000 0112233343
Q ss_pred -HCCcEEEcCCeEEEEeCCCCEEEcCC---Cc--EEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHH
Q 013890 84 -EKGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEA 157 (434)
Q Consensus 84 -~~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~ 157 (434)
+.+++++.+++|+.++++.+.+.+.+ +. .+.||++|+|||++|..|+ ++|.+..+++++.+..++..+.+.
T Consensus 77 ~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~v~~~~~~~~~~~l~~~ 153 (472)
T 3iwa_A 77 INKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPP---VEGMDLAGVTPVTNLDEAEFVQHA 153 (472)
T ss_dssp ----CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCS---CTTTTSBTEEECCSHHHHHHHHHH
T ss_pred hhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCC---CCCCCCCCEEEeCCHHHHHHHHHH
Confidence 57999999999999999999887654 54 7899999999999998887 566666789999999998888766
Q ss_pred HHhcCCCcEEEECCCHHHHHHHHHHHHC-CCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCC
Q 013890 158 IKAKKNGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 236 (434)
Q Consensus 158 l~~~~~~~vvVvG~g~~g~e~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~ 236 (434)
+....+++++|||+|++|+|+|..+.+. |.+|+++++.+.+++..+++++.+.+.+.+++.||++++++.|.+++. ++
T Consensus 154 l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~ 232 (472)
T 3iwa_A 154 ISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEG-EN 232 (472)
T ss_dssp CCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SS
T ss_pred hhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEc-cC
Confidence 6544589999999999999999999999 999999999999988558999999999999999999999999999987 34
Q ss_pred CcEEEEEeCCCcEEEcCEEEEccCCccChhhhhc-cccc-cCCcEEeCCCCCCCCCceEEecccccccccccCccccccc
Q 013890 237 GEVNEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEH 314 (434)
Q Consensus 237 g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~ 314 (434)
+.+ .+.+.+|+++++|.||+|+|++|+++++.. ++.. .+|+|.||+++||+.|+|||+|||+..+....+.+.++++
T Consensus 233 ~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~ 311 (472)
T 3iwa_A 233 GKV-ARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPL 311 (472)
T ss_dssp SBE-EEEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCC
T ss_pred CeE-EEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCcccCCCCEEEeccceecccccCCceeecch
Confidence 444 477888999999999999999999987743 6666 5789999999999999999999999877765566556678
Q ss_pred HHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCCc---------EEEEcCCCcc----ccCCcE
Q 013890 315 VDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD---------TVLFGDNDLA----SATHKF 381 (434)
Q Consensus 315 ~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~---------~~~~~~~~~~----~~~~~~ 381 (434)
+..|..||++||+||++... .....+|++++.+++..+..+|+++.+ ...+.....+ ..+.+|
T Consensus 312 ~~~A~~~g~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 387 (472)
T 3iwa_A 312 GSMANRQGRVIGTNLADGDA----TFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQFDRAHFYPEKTIMT 387 (472)
T ss_dssp TTHHHHHHHHHHHHHTTCCC----CCCCBCCCEEEECSSCEEEEEECCHHHHHHTTCCEEEEEEEC-----------CEE
T ss_pred HHHHHHHHHHHHHHhcCCCc----cCCCCCcceEEEECCceeEEEECCHHHHHHcCCceEEEEEecCCccCccCCCceEE
Confidence 88999999999999997542 233456788888888888888987622 1122111111 345689
Q ss_pred EEEEE--eCCEEEEEEEecC---ChHHH-HHHHHHHHcCCCCCChhhhhccC-CCcccc
Q 013890 382 GTYWI--KDGKVVGVFLESG---TPEEN-KAIAKVARVQPSVESLDVLKNEG-LSFASK 433 (434)
Q Consensus 382 ~~~~~--~~~~ilG~~~~g~---~~~~~-~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~ 433 (434)
+|+++ ++|+|||+|++|+ .++|+ +.++.||++++|++||..+.-+. ++|++.
T Consensus 388 ~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~ 446 (472)
T 3iwa_A 388 LQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVVYSPPFASA 446 (472)
T ss_dssp EEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC--------
T ss_pred EEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhcccccCCCCCCCc
Confidence 99888 5899999999998 33565 99999999999999999887765 777764
No 9
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=4.8e-54 Score=410.64 Aligned_cols=363 Identities=26% Similarity=0.370 Sum_probs=306.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
++.+|+|||||+||++||..|++.+.+ |+|||+++..+|.++.+++.+........+ .....++++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~---itlie~~~~~~y~~~~l~~~l~g~~~~~~l-----------~~~~~~~~~ 73 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDD---ITMINSEKYLPYYRPRLNEIIAKNKSIDDI-----------LIKKNDWYE 73 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSC---EEEECSSSSCCBCGGGHHHHHHSCCCGGGT-----------BSSCHHHHH
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCE---EEEEECCCCCCcccChhhHHHcCCCCHHHc-----------cCCCHHHHH
Confidence 457999999999999999999554544 999999999999888877643222111111 246778899
Q ss_pred HCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCC
Q 013890 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKN 163 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~ 163 (434)
+.+++++.+++|+.++++.++|.+.+++++.||+||||||++|+.|+ ++|.+ +++++++.+++..+.+.+.. +
T Consensus 74 ~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~---i~G~~--~v~~~~~~~d~~~l~~~l~~--~ 146 (385)
T 3klj_A 74 KNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIK---VPHAD--EIFSLYSYDDALKIKDECKN--K 146 (385)
T ss_dssp HTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCC---CTTCS--CEECCSSHHHHHHHHHHHHH--H
T ss_pred HCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCCC---CCCCC--CeEEeCCHHHHHHHHHHhhc--C
Confidence 99999999999999999999999999999999999999999999888 56655 89999999999998887763 6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVK 243 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~ 243 (434)
++++|||+|++|+|+|..|++.|.+|+++++.+++++..+++++.+.+.+.+++.||++++++.+.++
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i------------ 214 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM------------ 214 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc------------
Confidence 89999999999999999999999999999999999988789999999999999999999999888766
Q ss_pred eCCCcEEEcCEEEEccCCccChhhhhc-cccccCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHH
Q 013890 244 LKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSA 322 (434)
Q Consensus 244 ~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g 322 (434)
|+++++|.||+|+|++|++++++. ++..++ +|.||+++||+.|+|||+|||+..+.. ...+|..|..||
T Consensus 215 ---g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~~-gi~vd~~~~t~~~~IyA~GD~a~~~~~------~~~~~~~A~~qg 284 (385)
T 3klj_A 215 ---GDLIRSSCVITAVGVKPNLDFIKDTEIASKR-GILVNDHMETSIKDIYACGDVAEFYGK------NPGLINIANKQG 284 (385)
T ss_dssp ---HHHHHHSEEEECCCEEECCGGGTTSCCCBSS-SEEECTTCBCSSTTEEECGGGEEETTB------CCCCHHHHHHHH
T ss_pred ---CeEEecCeEEECcCcccChhhhhhcCCCcCC-CEEECCCcccCCCCEEEEEeeEecCCC------cccHHHHHHHHH
Confidence 557899999999999999988755 555554 499999999999999999999986542 126789999999
Q ss_pred HHHHHHHhccCCCCcccCCCC-CCeeEEeecCcceEEeecCCCc---EEEEcCCCccccCCcEEEEEEeCCEEEEEEEec
Q 013890 323 EQAVKTIMATEGGKTVTGYDY-LPYFYSRAFDLSWQFYGDNVGD---TVLFGDNDLASATHKFGTYWIKDGKVVGVFLES 398 (434)
Q Consensus 323 ~~aa~~i~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~~g 398 (434)
+.||.||++.. ..|.. .|++|+++++..+..+|..+.+ .+.. +. ....|.++++++|+|+|++++|
T Consensus 285 ~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~l~g~~~~g 354 (385)
T 3klj_A 285 EVAGLNACGED-----ASYSEIIPSPILKVSGISIISCGDIENNKPSKVFR-ST----QEDKYIVCMLKENKIDAAAVIG 354 (385)
T ss_dssp HHHHHHHTTCC-----CCCCCCCCCCEEEETTEEEEEESCCTTCCCSEEEE-EE----CSSCEEEEEEETTEEEEEEEES
T ss_pred HHHHHHhcCCC-----cCCCCCCCcEEEEeCCCcEEEEcCCCCCCCeEEEE-EC----CCCeEEEEEEECCEEEEEEEEC
Confidence 99999999754 35554 6999999999999999987642 2222 22 2567999999999999999999
Q ss_pred CChHHHHHHHHHHHcCCCCCCh
Q 013890 399 GTPEENKAIAKVARVQPSVESL 420 (434)
Q Consensus 399 ~~~~~~~~~~~~i~~~~~~~~~ 420 (434)
.. .....+..+|+++.+++|+
T Consensus 355 ~~-~~~~~~~~~i~~~~~~~~~ 375 (385)
T 3klj_A 355 DV-SLGTKLKKAIDSSKSFDNI 375 (385)
T ss_dssp CH-HHHHHHHHHHHTTCBCSCC
T ss_pred Cc-HHHHHHHHHHHcCCCcccc
Confidence 64 4555789999999999987
No 10
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=6.5e-54 Score=423.96 Aligned_cols=410 Identities=18% Similarity=0.253 Sum_probs=320.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
++||+|||||+||+++|..|++.|.+..+|+|||+++..+|..+.+.. ++... ...... ......+++++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~-~~~~~-~~~~~~--------~~~~~~~~~~~ 104 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMAL-WIGEQ-IAGPEG--------LFYSDKEELES 104 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHH-HHTTS-SSCSGG--------GBSCCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccch-hhcCc-cCCHHH--------hhhcCHHHHHh
Confidence 489999999999999999999987112339999999866554332210 11110 000000 01244677888
Q ss_pred CCcEEEcCCeEEEEeCCCCEEEcC-CC--cEEEeceEEEccCCCcccccCCCCCCCC-----------CCCEEEEeCHHH
Q 013890 85 KGIELILSTEIVRADIASKTLLSA-TG--LIFKYQILVIATGSTVLRLTDFGVEGAD-----------AKNIFYLREIDD 150 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~-~~--~~~~~d~lilAtG~~~~~p~~~~i~g~~-----------~~~v~~~~~~~~ 150 (434)
.+++++.+++++.++.+.+++.+. ++ .++.||+||||||++|..|+ ++|.+ .+++++++++.+
T Consensus 105 ~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~~~~~f~~~~~~v~~~~~~~~ 181 (490)
T 2bc0_A 105 LGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPP---IKGAEIKEGSLEFEATLENLQFVKLYQN 181 (490)
T ss_dssp TTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCS---CBTCCBCTTCTTCCBSSTTEEECSSHHH
T ss_pred CCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCC---CCCccccccccccccccCCEEEeCCHHH
Confidence 999999998999999988888775 43 57999999999999999887 45554 568999999988
Q ss_pred HHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 013890 151 ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 151 ~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
...+.+.+....+++++|||+|++|+|+|..|++.|.+|+++++.+++++..+++++.+.+.+.+++.||++++++.+++
T Consensus 182 ~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 261 (490)
T 2bc0_A 182 SADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKE 261 (490)
T ss_dssp HHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEE
T ss_pred HHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEE
Confidence 88887766333689999999999999999999999999999999999988668999999999999999999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhhhccccc-cCCcEEeCCCCCCCCCceEEecccccccccccCcc
Q 013890 231 FTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREM 309 (434)
Q Consensus 231 i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~ 309 (434)
++. ++.+..+.+ +|+++++|.||+|+|++|++++++..+.. .+|+|.||+++||+.|+|||+|||+..+....+.+
T Consensus 262 i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~ 338 (490)
T 2bc0_A 262 VAG--NGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGKIDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDT 338 (490)
T ss_dssp EEC--SSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTCSCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEE
T ss_pred EEc--CCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhhhccCCCCCEEECCCcccCCCCEEEeeeeEEeccccCCce
Confidence 986 444444555 67889999999999999999987655555 56889999999999999999999998765545555
Q ss_pred cccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCCc------EEE---EcCCCcc-----
Q 013890 310 RRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD------TVL---FGDNDLA----- 375 (434)
Q Consensus 310 ~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~------~~~---~~~~~~~----- 375 (434)
.+++++..|..||++||.||++... ......|++++.+|+..+..+|+++.+ .+. +.+....
T Consensus 339 ~~~~~~~~A~~qg~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~ 414 (490)
T 2bc0_A 339 NYIALASNAVRTGIVAAHNACGTDL----EGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEH 414 (490)
T ss_dssp ECCCCHHHHHHHHHHHHHHHTTCCC----CCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTCCS
T ss_pred eecccHHHHHHHHHHHHHHhcCCCC----CCCCcccceEEEECCcEeEEeeCCHHHHHHcCCceEEEEEecCCcccccCC
Confidence 5557899999999999999997431 222345677778888888888977521 111 1111111
Q ss_pred ccCCcEEEEEE--eCCEEEEEEEecC-ChHHH-HHHHHHHHcCCCCCChhhh-hccCCCccccC
Q 013890 376 SATHKFGTYWI--KDGKVVGVFLESG-TPEEN-KAIAKVARVQPSVESLDVL-KNEGLSFASKI 434 (434)
Q Consensus 376 ~~~~~~~~~~~--~~~~ilG~~~~g~-~~~~~-~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~ 434 (434)
....+|+|+++ ++|+|||++++|+ +++++ +.++.+|++++|++|+..+ ..+.++|++.+
T Consensus 415 ~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~ 478 (490)
T 2bc0_A 415 GNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEKLALTDIFFLPHFNKPY 478 (490)
T ss_dssp SCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHHHHHSCCCCCTTTCCTT
T ss_pred CCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCchh
Confidence 12457888887 4799999999999 67776 9999999999999999986 68888888753
No 11
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.7e-53 Score=415.57 Aligned_cols=406 Identities=20% Similarity=0.241 Sum_probs=313.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHH-H
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY-K 83 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 83 (434)
++||+|||||+||+++|..|++.+. ..+|+|||+++...+..+.+...+........ ......+++ +
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~-~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~-----------~~~~~~~~~~~ 70 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKP-EWDVKVFEATEWVSHAPCGIPYVVEGLSTPDK-----------LMYYPPEVFIK 70 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSSCCC-----------------------------------CTHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCc-CCCEEEEECCCccccCCcCCccccCCCCCHHH-----------hhhcCHHHHHH
Confidence 5799999999999999999999842 34499999998765543322211100000000 011223344 6
Q ss_pred HCCcEEEcCCeEEEEeCCCCEEEcCCC-cEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcC
Q 013890 84 EKGIELILSTEIVRADIASKTLLSATG-LIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~-~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~ 162 (434)
+.+++++.+++++.++...+.+...++ .++.||+||+|||++|..|+ ++|.+..++++.++..++..+.+.+....
T Consensus 71 ~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~---i~G~~~~~v~~~~~~~~~~~~~~~~~~~~ 147 (449)
T 3kd9_A 71 KRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPA---IEGVNLKGVFTADLPPDALAIREYMEKYK 147 (449)
T ss_dssp HTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEECCCS---CBTTTSTTEECSCSTHHHHHHHHHHSSSC
T ss_pred hcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCC---CCCCCCCCEEEeCCHHHHHHHHHHHHhcC
Confidence 789999999999999988888887777 48999999999999998887 57777778998888888888888776556
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEV 242 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v 242 (434)
+++++|||+|++|+|+|..|.+.|.+|+++++.+++++..+++++.+.+.+.+++. |++++++.+.+++. ++.+..+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~--~~~v~~v 224 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEG--EERVEKV 224 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEEC--SSSCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEec--cCcEEEE
Confidence 88999999999999999999999999999999999998768999999999999999 99999999999986 3333334
Q ss_pred EeCCCcEEEcCEEEEccCCccChhhhhc-cccc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHH
Q 013890 243 KLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARK 320 (434)
Q Consensus 243 ~~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~ 320 (434)
+.+++++++|.|++|+|++|++++++. ++.. .+|+|.||+++||+.|+|||+|||+..+....+.+.+++++..|..
T Consensus 225 -~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~ 303 (449)
T 3kd9_A 225 -VTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNK 303 (449)
T ss_dssp -EETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHH
T ss_pred -EeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHH
Confidence 456778999999999999999988754 6666 5688999999999999999999999877665565555678999999
Q ss_pred HHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCCc------EE---EEcCCCcc----ccCCcEEEEEE-
Q 013890 321 SAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD------TV---LFGDNDLA----SATHKFGTYWI- 386 (434)
Q Consensus 321 ~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~------~~---~~~~~~~~----~~~~~~~~~~~- 386 (434)
||+.+|+||++... ......|+.++.+++..+..+|+++.+ .+ .+.....+ ..+.+|+|+++
T Consensus 304 ~g~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~ 379 (449)
T 3kd9_A 304 MGYVAGSNIAGKEL----HFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGREIWLKGVVD 379 (449)
T ss_dssp HHHHHHHHHTTCCC----CCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEEEEE
T ss_pred HHHHHHHHhcCCCc----cCCCcccceEEEEcCcEEEEecCCHHHHHHCCCceEEEEEecCCccccCCCCceEEEEEEEE
Confidence 99999999997542 222345666777778888888987521 11 11111111 23568999888
Q ss_pred -eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhh-hccCCCcccc
Q 013890 387 -KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVL-KNEGLSFASK 433 (434)
Q Consensus 387 -~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~ 433 (434)
++++|||+|++|+.++|+ +.++.||++++|++||..+ ..+.++|++.
T Consensus 380 ~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~~ 429 (449)
T 3kd9_A 380 NETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAPV 429 (449)
T ss_dssp TTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBCS
T ss_pred CCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCCc
Confidence 459999999999999887 9999999999999998877 4566676653
No 12
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=9.2e-54 Score=419.29 Aligned_cols=407 Identities=19% Similarity=0.297 Sum_probs=319.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+||+|||||++|+++|..|++. |.+ |+|||+++..+|..+.+.. ++... .... ... .......+++.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~---V~lie~~~~~~~~~~~~~~-~~~g~-~~~~-~~~-----~~~~~~~~~~~ 69 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDAD---VTAYEMNDNISFLSCGIAL-YLGKE-IKNN-DPR-----GLFYSSPEELS 69 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCE---EEEEESSSCCCBCGGGHHH-HHTTC-BGGG-CGG-----GGBSCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCc---EEEEECCCCCCcccccchh-hhcCC-cccC-CHH-----HhhhcCHHHHH
Confidence 5899999999999999999998 655 9999999866654332211 11100 0000 000 01134567788
Q ss_pred HCCcEEEcCCeEEEEeCCCCEEEcCC-----CcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHH
Q 013890 84 EKGIELILSTEIVRADIASKTLLSAT-----GLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~-----~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l 158 (434)
+.+++++.+++++.++.+.+++.+.+ +.++.||++|+|||++|..|+ ++|.+..++++++++.+...+.+..
T Consensus 70 ~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~---i~g~~~~~v~~~~~~~~~~~~~~~~ 146 (452)
T 2cdu_A 70 NLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPP---IPGIDSSRVYLCKNYNDAKKLFEEA 146 (452)
T ss_dssp HTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---CTTTTSTTEEECSSHHHHHHHHHHG
T ss_pred HcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCC---CCCCCCCCEEEeCcHHHHHHHHHHh
Confidence 89999999988999998888877643 467999999999999998887 5666667899999998888887665
Q ss_pred HhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCc
Q 013890 159 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE 238 (434)
Q Consensus 159 ~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~ 238 (434)
. .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++..+++++.+.+.+.+++.||+++++++|++++. +++.
T Consensus 147 ~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~ 223 (452)
T 2cdu_A 147 P--KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEE-VDDE 223 (452)
T ss_dssp G--GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEE-ETTE
T ss_pred c--cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEc-CCCe
Confidence 4 588999999999999999999999999999999999988668999999999999999999999999999986 3455
Q ss_pred EEEEEeCCCcEEEcCEEEEccCCccChhhhhccccc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHH
Q 013890 239 VNEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDH 317 (434)
Q Consensus 239 ~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~ 317 (434)
+..+.+ +|+++++|.||+|+|++|++++++..+.. .+|+|.||+++||++|+|||+|||+..+....+.+.+++++..
T Consensus 224 v~~v~~-~g~~i~~D~vv~a~G~~p~~~ll~~~l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~ 302 (452)
T 2cdu_A 224 IITKTL-DGKEIKSDIAILCIGFRPNTELLKGKVAMLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATN 302 (452)
T ss_dssp EEEEET-TSCEEEESEEEECCCEEECCGGGTTTSCBCTTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHH
T ss_pred EEEEEe-CCCEEECCEEEECcCCCCCHHHHHHhhhcCCCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHH
Confidence 545555 77899999999999999999987655555 5688999999999999999999999976654555555678999
Q ss_pred HHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCCcE------E---EEcCCCcc----ccCCcEEEE
Q 013890 318 ARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGDT------V---LFGDNDLA----SATHKFGTY 384 (434)
Q Consensus 318 A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~------~---~~~~~~~~----~~~~~~~~~ 384 (434)
|..||+.||+||++... ......|++++.+++..+..+|+++.+. + .+.+.... ....+|+|+
T Consensus 303 A~~~g~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~ 378 (452)
T 2cdu_A 303 AVRQGRLVGLNLTEDKV----KDMGTQSSSGLKLYGRTYVSTGINTALAKANNLKVSEVIIADNYRPEFMLSTDEVLMSL 378 (452)
T ss_dssp HHHHHHHHHHTSSSCCC----CCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTBSCCCEEEEEE
T ss_pred HHHHHHHHHHHhCCCCC----cCCCccceEEEEECCeeeEeecCCHHHHHHcCCceEEEEEecCCccccCCCCceEEEEE
Confidence 99999999999987431 2233456777888888888889775211 1 12211111 224578888
Q ss_pred EE--eCCEEEEEEEecC-ChHHH-HHHHHHHHcCCCCCChhhh-hccCCCccccC
Q 013890 385 WI--KDGKVVGVFLESG-TPEEN-KAIAKVARVQPSVESLDVL-KNEGLSFASKI 434 (434)
Q Consensus 385 ~~--~~~~ilG~~~~g~-~~~~~-~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~ 434 (434)
++ ++++|||++++|+ +++++ +.++.+|++++|++|+..+ ..+.++|++.+
T Consensus 379 ~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~ 433 (452)
T 2cdu_A 379 VYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDRPF 433 (452)
T ss_dssp EECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCCSS
T ss_pred EEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCchH
Confidence 87 4799999999999 78876 9999999999999999986 67888888753
No 13
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=4.2e-52 Score=419.30 Aligned_cols=406 Identities=23% Similarity=0.310 Sum_probs=320.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH-H
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK-E 84 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 84 (434)
+||+|||||+||++||..|++++. ..+|+|||+++..+|.++.++..+ ....... ........+++. +
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~-~~~V~lie~~~~~~~~~~~l~~~~-~~~~~~~---------~~~~~~~~~~~~~~ 70 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSE-TAEIIMFERGEYVSFANCGLPYHI-SGEIAQR---------SALVLQTPESFKAR 70 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHHHH-TSSSCCG---------GGGBCCCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhCc-CCCEEEEECCCCccccccCchHHh-cCCcCCh---------HHhhccCHHHHHHh
Confidence 589999999999999999999842 345999999998777654332211 1100000 000123344444 4
Q ss_pred CCcEEEcCCeEEEEeCCCCEEEcCC---Cc--EEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHH
Q 013890 85 KGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIK 159 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~ 159 (434)
.+++++.+++|+.++++.+.+.+.+ +. ++.||+||||||++|+.|+ ++|.+..++++.++..++..+.+.+.
T Consensus 71 ~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~---ipG~~~~~v~~~~~~~~~~~l~~~~~ 147 (565)
T 3ntd_A 71 FNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPP---IPGVDNPLTHSLRNIPDMDRILQTIQ 147 (565)
T ss_dssp HCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---CTTCCSTTEECCSSHHHHHHHHHHHH
T ss_pred cCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCC---CCCCCCCCEEEeCCHHHHHHHHHHHh
Confidence 8999999999999999999877643 43 7899999999999998887 57777788999999999888887776
Q ss_pred hcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEec-----
Q 013890 160 AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN----- 234 (434)
Q Consensus 160 ~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~----- 234 (434)
...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.||++++++.+.+++.+
T Consensus 148 ~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~ 226 (565)
T 3ntd_A 148 MNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP-VDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHV 226 (565)
T ss_dssp HTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCC
T ss_pred hCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-cCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccc
Confidence 667899999999999999999999999999999999998884 79999999999999999999999999999862
Q ss_pred -------------CCCcEEEEEeCCCcEEEcCEEEEccCCccChhhhhc-cccc-cCCcEEeCCCCCCCCCceEEecccc
Q 013890 235 -------------ADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVA 299 (434)
Q Consensus 235 -------------~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~ 299 (434)
.++. ..+.+.+|+++++|.||+|+|++|++++++. ++.. .+|+|.||+++||++|+|||+|||+
T Consensus 227 ~~~~~~~~~~~~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~ 305 (565)
T 3ntd_A 227 ASDAAGEDTAHQHIKGH-LSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAV 305 (565)
T ss_dssp CCGGGTCCCTTCCTTCE-EEEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGB
T ss_pred cccccccccccccCCCc-EEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeeeE
Confidence 2333 3567788999999999999999999987744 6666 5789999999999999999999999
Q ss_pred cccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCC-CCeeEEeecCcceEEeecCCCc---------EEEE
Q 013890 300 TFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDY-LPYFYSRAFDLSWQFYGDNVGD---------TVLF 369 (434)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~G~~~~~---------~~~~ 369 (434)
..+....+.+.+++++..|..||++||+||++.. ..|.. .|+.++.+++..+..+|+++.+ ...+
T Consensus 306 ~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~ 380 (565)
T 3ntd_A 306 EEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE-----ERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGIAFEKVYV 380 (565)
T ss_dssp CEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC-----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEE
T ss_pred eeccccCCceeecccHHHHHHHHHHHHHHhcCCC-----ccCCCcccceEEEEcCcEEEEecCCHHHHHHcCCCeEEEEE
Confidence 8777656666566789999999999999999754 23443 3455567788888888987632 1122
Q ss_pred cCCCcc----ccCCcEEEEEE--eCCEEEEEEEecCCh-HHH-HHHHHHHHcCCCCCChhhhhc-cCCCccc
Q 013890 370 GDNDLA----SATHKFGTYWI--KDGKVVGVFLESGTP-EEN-KAIAKVARVQPSVESLDVLKN-EGLSFAS 432 (434)
Q Consensus 370 ~~~~~~----~~~~~~~~~~~--~~~~ilG~~~~g~~~-~~~-~~~~~~i~~~~~~~~~~~~~~-~~~~~~~ 432 (434)
.....+ ....+|+|+++ ++++|||+|++|+++ +|+ +.++.||++++|++||..+.. +.++|.+
T Consensus 381 ~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~~~~~~l~~~~~~~~P~~~~ 452 (565)
T 3ntd_A 381 HTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMTVEQLQHLELSYAPPYGS 452 (565)
T ss_dssp EEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBHHHHTTCCCCCCTTTCC
T ss_pred ecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCcccCc
Confidence 111111 34567899888 689999999999998 776 999999999999999888753 3355543
No 14
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=1.7e-52 Score=409.72 Aligned_cols=405 Identities=22% Similarity=0.286 Sum_probs=316.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+||+|||||+||++||..|++. |.+ |+|||+++..+|..+.+.. ++... .+... .......++++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~---V~lie~~~~~~~~~~~~~~-~~~~~----~~~~~-----~~~~~~~~~~~ 67 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAE---IQWYEKGDFISFLSAGMQL-YLEGK----VKDVN-----SVRYMTGEKME 67 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSE---EEEEESSSSSSBCGGGHHH-HHTTS----SCCGG-----GSBSCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCe---EEEEECCCccCcccccchh-hhcCc----cCCHH-----HhhcCCHHHHH
Confidence 3899999999999999999998 554 9999999876554332211 11110 00000 01234567788
Q ss_pred HCCcEEEcCCeEEEEeCCCCEEEcCC---Cc--EEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHH
Q 013890 84 EKGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l 158 (434)
+.+++++.++.++.++.+.+++.+.+ ++ ++.||++|||||++|..|+ ++|.+.++++++++..++..+.+.+
T Consensus 68 ~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~v~~~~~~~~~~~l~~~~ 144 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELD---IPGKDLDNIYLMRGRQWAIKLKQKT 144 (447)
T ss_dssp HTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---STTTTSBSEECCCHHHHHHHHHHHH
T ss_pred HCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCC---CCCCCCCCeEEECCHHHHHHHHHHh
Confidence 88999999999999999888887643 54 4899999999999998887 5666666799888888888887776
Q ss_pred HhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCc
Q 013890 159 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE 238 (434)
Q Consensus 159 ~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~ 238 (434)
....+++++|||+|++|+|+|..|++.|.+|+++++.+.+++..+++++.+.+.+.+++.||++++++.|.+++. ++.
T Consensus 145 ~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~ 222 (447)
T 1nhp_A 145 VDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEG--DGR 222 (447)
T ss_dssp TCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEEC--SSB
T ss_pred hhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEc--cCc
Confidence 543589999999999999999999999999999999998888668999999999999999999999999999986 344
Q ss_pred EEEEEeCCCcEEEcCEEEEccCCccChhhhhccccc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHH
Q 013890 239 VNEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDH 317 (434)
Q Consensus 239 ~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~ 317 (434)
+..+.+ +++++++|.|++|+|++|++++++..+.. .+|+|.||+++||+.|+|||+|||+..+....+.+.++.++..
T Consensus 223 v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~ 301 (447)
T 1nhp_A 223 VQKVVT-DKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATN 301 (447)
T ss_dssp CCEEEE-SSCEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHH
T ss_pred EEEEEE-CCCEEECCEEEECcCCCCChHHHHhhhhhcCCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHH
Confidence 444555 45689999999999999999887655554 5688999999999999999999999876544454445578999
Q ss_pred HHHHHHHHHHHHhccCCCCcccCC-CCCCeeEEeecCcceEEeecCCCc---------EEEEcCCCcc----ccCCcEEE
Q 013890 318 ARKSAEQAVKTIMATEGGKTVTGY-DYLPYFYSRAFDLSWQFYGDNVGD---------TVLFGDNDLA----SATHKFGT 383 (434)
Q Consensus 318 A~~~g~~aa~~i~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~G~~~~~---------~~~~~~~~~~----~~~~~~~~ 383 (434)
|..||+.||.||.+.. ..+ ...|+.+..+++..+..+|.++.+ ...+.+...+ ....+|+|
T Consensus 302 A~~qg~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k 376 (447)
T 1nhp_A 302 ARKQGRFAVKNLEEPV-----KPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKAWFK 376 (447)
T ss_dssp HHHHHHHHHHTSSSCC-----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHHTCCCEEEEEEEESSCTTCTTCCEEEEE
T ss_pred HHHHHHHHHHhhcCCC-----CCCCCccccEEEEECCeeeEEecCCHHHHHHcCCceEEEEEEcCCccccCCCCceEEEE
Confidence 9999999999998742 222 234666777777777788876521 1112111111 23457888
Q ss_pred EEEe--CCEEEEEEEecCC-hHHH-HHHHHHHHcCCCCCChhhh-hccCCCccccC
Q 013890 384 YWIK--DGKVVGVFLESGT-PEEN-KAIAKVARVQPSVESLDVL-KNEGLSFASKI 434 (434)
Q Consensus 384 ~~~~--~~~ilG~~~~g~~-~~~~-~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~ 434 (434)
++++ +|+|||+|++|+. +.++ +.++.+|++++|++|+..+ ..+.++|++.+
T Consensus 377 ~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~ 432 (447)
T 1nhp_A 377 LVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPAFDKPW 432 (447)
T ss_dssp EEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTTTCCSS
T ss_pred EEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCCcc
Confidence 8883 7999999999998 7776 9999999999999999987 57889888753
No 15
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=2.3e-51 Score=415.12 Aligned_cols=407 Identities=22% Similarity=0.294 Sum_probs=320.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
++||+|||||+||++||.+|++++. ..+|+|||+++..+|..+.+...+. ..... . . .........+.++
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~-g~~V~vie~~~~~~~~~~~lp~~~~-g~~~~-~---~----~~~~~~~~~~~~~ 105 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSE-EDEIIMVERGEYISFANCGLPYYIG-GVITE-R---Q----KLLVQTVERMSKR 105 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHHHHT-TSSCC-G---G----GGBSSCHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCc-CCCEEEEECCCCccccCCCCchhhc-CcCCC-h---H----HhhccCHHHHHHh
Confidence 4799999999999999999999831 2349999999987776543321111 00000 0 0 0001233455568
Q ss_pred CCcEEEcCCeEEEEeCCCCEEEcC---CCc--EEEeceEEEccCCCcccccCCCCCCC-CCCCEEEEeCHHHHHHHHHHH
Q 013890 85 KGIELILSTEIVRADIASKTLLSA---TGL--IFKYQILVIATGSTVLRLTDFGVEGA-DAKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~---~~~--~~~~d~lilAtG~~~~~p~~~~i~g~-~~~~v~~~~~~~~~~~l~~~l 158 (434)
.+++++.+++|+.++.+.+.+.+. ++. .+.||+||+|||++|..|+ ++|. +..++++.++..+...+...+
T Consensus 106 ~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~~v~~~~~~~~~~~~~~~l 182 (588)
T 3ics_A 106 FNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPS---IPGIEEAKALFTLRNVPDTDRIKAYI 182 (588)
T ss_dssp TTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---CTTTTTCTTEEECSSHHHHHHHHHHH
T ss_pred cCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCC---CCCcccCCCeEEeCCHHHHHHHHHHH
Confidence 899999999999999999887763 454 7899999999999999887 5666 567899999999998888877
Q ss_pred HhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCc
Q 013890 159 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE 238 (434)
Q Consensus 159 ~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~ 238 (434)
....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.||++++++.|.+++.+. +
T Consensus 183 ~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~- 259 (588)
T 3ics_A 183 DEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYEMAAYVHEHMKNHDVELVFEDGVDALEENG-A- 259 (588)
T ss_dssp HHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG-T-
T ss_pred hhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-CCHHHHHHHHHHHHHcCCEEEECCeEEEEecCC-C-
Confidence 6557899999999999999999999999999999999999887 799999999999999999999999999998632 2
Q ss_pred EEEEEeCCCcEEEcCEEEEccCCccChhhhhc-cccc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHH
Q 013890 239 VNEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVD 316 (434)
Q Consensus 239 ~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~ 316 (434)
.+.+.+|+++++|.||+|+|++|++++++. ++.. .+|+|.||+++||++|+|||+|||+..+....+.+..++++.
T Consensus 260 --~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~ 337 (588)
T 3ics_A 260 --VVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAW 337 (588)
T ss_dssp --EEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHH
T ss_pred --EEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCccccCCCCEEEeeeeeecccccCCcccccccHH
Confidence 477889999999999999999999987743 5666 578999999999999999999999987765556555567899
Q ss_pred HHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCCc---------EEEEcCCC----ccccCCcEEE
Q 013890 317 HARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD---------TVLFGDND----LASATHKFGT 383 (434)
Q Consensus 317 ~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~---------~~~~~~~~----~~~~~~~~~~ 383 (434)
.|..||++||+||++... ......+|+.+..+++..+..+|+++.+ ...+.... ....+.+|+|
T Consensus 338 ~A~~~g~~aa~~i~g~~~---~~~~~~~~~~~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k 414 (588)
T 3ics_A 338 PANRQGRMLADIIHGHTD---SLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEVVHVQANSHAGYYPNATPVLIK 414 (588)
T ss_dssp HHHHHHHHHHHHHTTCCS---SCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCc---cccCCcccceEEEECCeEEEEecCCHHHHHHcCCCeEEEEEecCCccccCCCCceEEEE
Confidence 999999999999997321 1233456777777777778888987621 11111111 1134568999
Q ss_pred EEE--eCCEEEEEEEecCC-hHHH-HHHHHHHHcCCCCCChhhhhccC-CCccc
Q 013890 384 YWI--KDGKVVGVFLESGT-PEEN-KAIAKVARVQPSVESLDVLKNEG-LSFAS 432 (434)
Q Consensus 384 ~~~--~~~~ilG~~~~g~~-~~~~-~~~~~~i~~~~~~~~~~~~~~~~-~~~~~ 432 (434)
+++ ++++|||+|++|+. ++|+ +.++.||++++|++||+.+.-.. ++|.+
T Consensus 415 ~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~ 468 (588)
T 3ics_A 415 LIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLDLPDLELSYAPPYSS 468 (588)
T ss_dssp EEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTTGGGCCCCCSTTTCC
T ss_pred EEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHHhhhhhhccCCCccc
Confidence 888 58999999999974 6775 99999999999999999876544 55543
No 16
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=7.5e-51 Score=401.05 Aligned_cols=405 Identities=21% Similarity=0.305 Sum_probs=314.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
++||+|||||+||+++|..|++. |.+ |+|||+++..+|..+.++. ++... .+.+. .......+++
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~---V~lie~~~~~~~~~~~~~~-~~~~~----~~~~~-----~l~~~~~~~~ 102 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENAN---VVTLEKGEIYSYAQCGLPY-VISGA----IASTE-----KLIARNVKTF 102 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCE---EEEECSSSCCSBCGGGHHH-HHTTS----SSCGG-----GGBSSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCc---EEEEECCCCCCCCCCCcch-hhcCC----cCCHH-----HhhhcCHHHH
Confidence 36999999999999999999997 554 9999999876665443321 11110 00000 0012345555
Q ss_pred -HHCCcEEEcCCeEEEEeCCCCEEEcCC---Cc--EEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHH
Q 013890 83 -KEKGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVE 156 (434)
Q Consensus 83 -~~~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~ 156 (434)
++.+++++.+++++.++.+.+.+.+.+ ++ ++.||+||+|||++|..|+ ++|.+..+++++.+.+++..+.+
T Consensus 103 ~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~v~~~~~~~~~~~l~~ 179 (480)
T 3cgb_A 103 RDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPE---WEGRDLQGVHLLKTIPDAERILK 179 (480)
T ss_dssp HHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---CBTTTSBTEECCSSHHHHHHHHH
T ss_pred HhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCC---CCCccCCCEEEeCCHHHHHHHHH
Confidence 445999999989999999888877643 55 7999999999999998887 56666578998889999988887
Q ss_pred HHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCC
Q 013890 157 AIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 236 (434)
Q Consensus 157 ~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~ 236 (434)
.+....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.||++++++.|+++.. +
T Consensus 180 ~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~ 256 (480)
T 3cgb_A 180 TLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI-YDGDMAEYIYKEADKHHIEILTNENVKAFKG--N 256 (480)
T ss_dssp HHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS-SCHHHHHHHHHHHHHTTCEEECSCCEEEEEE--S
T ss_pred HhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc-CCHHHHHHHHHHHHHcCcEEEcCCEEEEEEc--C
Confidence 776546899999999999999999999999999999999988875 7999999999999999999999999999987 3
Q ss_pred CcEEEEEeCCCcEEEcCEEEEccCCccChhhhhc-cccc-cCCcEEeCCCCCCCCCceEEecccccccccccCccccccc
Q 013890 237 GEVNEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEH 314 (434)
Q Consensus 237 g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~ 314 (434)
+.+..+.++ +.++++|.||+|+|++|++++++. ++.. .+|+|.||+++||++|+|||+|||+..+....+.+.++.+
T Consensus 257 ~~v~~v~~~-~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~ 335 (480)
T 3cgb_A 257 ERVEAVETD-KGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPI 335 (480)
T ss_dssp SBEEEEEET-TEEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCC
T ss_pred CcEEEEEEC-CCEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecch
Confidence 555556665 458999999999999999987754 5665 5689999999999999999999999876654455445578
Q ss_pred HHHHHHHHHHHHHHHhccCCCCcccCC-CCCCeeEEeecCcceEEeecCCCc---------EEEEcCCCcc----ccCCc
Q 013890 315 VDHARKSAEQAVKTIMATEGGKTVTGY-DYLPYFYSRAFDLSWQFYGDNVGD---------TVLFGDNDLA----SATHK 380 (434)
Q Consensus 315 ~~~A~~~g~~aa~~i~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~G~~~~~---------~~~~~~~~~~----~~~~~ 380 (434)
+..|..||++||.||++.. ..| ...++.+..+++..+..+|+++.+ ...+...... ....+
T Consensus 336 ~~~A~~qg~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 410 (480)
T 3cgb_A 336 GTTANKQGRLAGLNMLDKR-----RAFKGTLGTGIIKFMNLTLARTGLNEKEAKGLHIPYKTVKVDSTNMAGYYPNAKPL 410 (480)
T ss_dssp HHHHHHHHHHHHHHHTTCC-----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEE
T ss_pred HHHHHHHHHHHHHHhcCCC-----ccCCCccceeEEEECCcEEEEeCCCHHHHHHcCCceEEEEEecCCcccccCCCceE
Confidence 9999999999999999743 223 233345566677777777876521 1111111111 23456
Q ss_pred EEEEEE--eCCEEEEEEEecCC-hHHH-HHHHHHHHcCCCCCChhhh-hccCCCccccC
Q 013890 381 FGTYWI--KDGKVVGVFLESGT-PEEN-KAIAKVARVQPSVESLDVL-KNEGLSFASKI 434 (434)
Q Consensus 381 ~~~~~~--~~~~ilG~~~~g~~-~~~~-~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~ 434 (434)
|+|+++ ++|+|||++++|+. ++++ +.++.||++++|++||..+ ..+.++|++.+
T Consensus 411 ~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~ 469 (480)
T 3cgb_A 411 YLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVDLSYAPPYNSVW 469 (480)
T ss_dssp EEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCSS
T ss_pred EEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcccccCCCCCCch
Confidence 888888 47999999999998 8776 9999999999999999986 46788887753
No 17
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.6e-49 Score=381.09 Aligned_cols=367 Identities=22% Similarity=0.303 Sum_probs=288.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHH
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
+.++||+|||||+||++||..|++.|. +.+|+++|++..+.|.++.++..+........+ ......+++
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~----------~~~~~~~~~ 70 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRKLDG-ETPLLMITADDGRSYSKPMLSTGFSKNKDADGL----------AMAEPGAMA 70 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHTTCS-SSCEEEECSSCCCEECGGGGGGTTTTTCCHHHH----------EEECHHHHH
T ss_pred CCCCcEEEECChHHHHHHHHHHHhhCC-CCCEEEEECCCCCccCcccccHHHhCCCCHHHh----------hccCHHHHH
Confidence 346899999999999999999999885 345999999976666554443322111000000 001234566
Q ss_pred HHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcC
Q 013890 83 KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~ 162 (434)
++.+++++.++++..++.+.++|.+.+ .++.||++|+|||++|..|+ ++|.+..++++.+++.++..+...+. .
T Consensus 71 ~~~~v~~~~~~~v~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~~p~---i~g~~~~~v~~~~~~~~~~~~~~~~~--~ 144 (384)
T 2v3a_A 71 EQLNARILTHTRVTGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPIRVP---VEGDAQDALYPINDLEDYARFRQAAA--G 144 (384)
T ss_dssp HHTTCEEECSCCCCEEEGGGTEEEETT-EEEECSEEEECCCEEECCCC---CBSTTTTCEEECSSHHHHHHHHHHHT--T
T ss_pred HhCCcEEEeCCEEEEEECCCCEEEECC-cEEECCEEEEeCCCCcCCCC---CCCcCcCCEEEECCHHHHHHHHHhhc--c
Confidence 788999999888999998888888754 47999999999999998887 56665578999999999888777665 4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEV 242 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v 242 (434)
+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||++++++.|.+++.+++ ...+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~~v 222 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE--GLEA 222 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETT--EEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCC--EEEE
Confidence 89999999999999999999999999999999999888767999999999999999999999999999987322 3578
Q ss_pred EeCCCcEEEcCEEEEccCCccChhhhh-ccccccCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHH
Q 013890 243 KLKDGRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKS 321 (434)
Q Consensus 243 ~~~~g~~i~~d~vv~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~ 321 (434)
.+.+|+++++|.||+|+|++|++++++ .++..++| |.||+++||+.|+|||+|||+..... ..+++..|..|
T Consensus 223 ~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~vd~~~~t~~~~IyA~GD~~~~~~~------~~~~~~~a~~~ 295 (384)
T 2v3a_A 223 HLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLRTSHANIYALGDCAEVDGL------NLLYVMPLMAC 295 (384)
T ss_dssp EETTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEECTTCBCSSTTEEECGGGEEETTB------CCCSHHHHHHH
T ss_pred EECCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEECCCCCCCCCCEEEeeeeeeECCC------CcchHHHHHHH
Confidence 888999999999999999999998764 35666656 99999999999999999999975322 12568889999
Q ss_pred HHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCCc---EEEEcCCCccccCCcEEEEEE-eCCEEEEEEEe
Q 013890 322 AEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD---TVLFGDNDLASATHKFGTYWI-KDGKVVGVFLE 397 (434)
Q Consensus 322 g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~ilG~~~~ 397 (434)
|+.+|+||++... ...|..+|+++.+ +++.+...|..... ....++ ..+|.++++ ++|+|+|++++
T Consensus 296 g~~~a~~i~g~~~---~~~~~~~p~~~~~-~~~~~~~~g~~~~~~~~~~~~~~------~~g~~~~~~~~~~~i~G~~~~ 365 (384)
T 2v3a_A 296 ARALAQTLAGNPS---QVAYGPMPVTVKT-PACPLVVSPPPRGMDGQWLVEGS------GTDLKVLCRDTAGRVIGYALT 365 (384)
T ss_dssp HHHHHHHHTTCCC---CCCCCCCCEEECC-TTSCEEEECCCTTCCCEEEEEEE------TTEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHHhcCCCc---cCCCCCcceEEEE-CCeeEEEecCCCCCCceEEEEec------CCcEEEEEEccCCEEEEEEEE
Confidence 9999999997532 2566778887654 45666666765432 111221 446888777 48999999999
Q ss_pred cCChHHHH
Q 013890 398 SGTPEENK 405 (434)
Q Consensus 398 g~~~~~~~ 405 (434)
|+.++|+.
T Consensus 366 g~~a~e~~ 373 (384)
T 2v3a_A 366 GAAVNEKL 373 (384)
T ss_dssp GGGGGGHH
T ss_pred CcchHHHH
Confidence 99999973
No 18
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1.8e-51 Score=406.13 Aligned_cols=396 Identities=19% Similarity=0.221 Sum_probs=276.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC------C------CCCccccccCCCCCC-----CCCCcc
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY------E------RPALSKAYLFPEGTA-----RLPGFH 67 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~------~------~~~~~~~~~~~~~~~-----~~~~~~ 67 (434)
.||+||||||+||+.||..++++|.+ |+|||+...... . .|.++|.++...... ....+.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~k---ValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~G 118 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGAR---VLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYG 118 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCC---EEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcC
Confidence 48999999999999999999999988 999998653211 1 122334333211000 000011
Q ss_pred eecCC---CC--------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEc--C----CCcEEEeceEEEccCC
Q 013890 68 VCVGS---GG--------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLS--A----TGLIFKYQILVIATGS 124 (434)
Q Consensus 68 ~~~~~---~~--------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~--~----~~~~~~~d~lilAtG~ 124 (434)
..... +. .......+++.+++++.+.. .-++ .+++.+ . +++++.++++|||||+
T Consensus 119 i~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a-~f~~--~~~v~V~~~~~~~~~~~i~a~~iiIATGs 195 (542)
T 4b1b_A 119 WKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLA-KLKD--KNTVSYYLKGDLSKEETVTGKYILIATGC 195 (542)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEE-EEEE--TTEEEEEEC--CCCEEEEEEEEEEECCCE
T ss_pred cccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeE-EEcC--CCcceEeecccCCceEEEeeeeEEeccCC
Confidence 00000 00 01122345668999998743 3333 344432 2 3367999999999999
Q ss_pred CcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccC
Q 013890 125 TVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFT 204 (434)
Q Consensus 125 ~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~ 204 (434)
+|.+|+. +++ +...++ +.+++..+. ..|++++|||+|++|+|+|..|+++|.+||++.+. ++++. +|
T Consensus 196 ~P~~P~~--~~~-~~~~~~---ts~~~l~l~-----~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~-~~L~~-~D 262 (542)
T 4b1b_A 196 RPHIPDD--VEG-AKELSI---TSDDIFSLK-----KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS-IVLRG-FD 262 (542)
T ss_dssp EECCCSS--SBT-HHHHCB---CHHHHTTCS-----SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS-CSSTT-SC
T ss_pred CCCCCCc--ccC-CCcccc---Cchhhhccc-----cCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc-ccccc-cc
Confidence 9998874 222 212233 333333221 25899999999999999999999999999999874 56665 79
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhhh---ccccc-cCC-cE
Q 013890 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLFK---GQVAE-NKG-GI 279 (434)
Q Consensus 205 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~---~~~~~-~~g-~i 279 (434)
+++++.+.+.+++.||++++++.+.+++..++ ...+.+.+++++.+|.|++|+|++||++.+. .++.. ..+ .|
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~--~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i 340 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDD--KILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKI 340 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEETT--EEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecCC--eEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceE
Confidence 99999999999999999999999999987333 3568888898999999999999999999763 34554 334 46
Q ss_pred EeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEe
Q 013890 280 ETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFY 359 (434)
Q Consensus 280 ~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 359 (434)
.||+++||++|+|||+|||++... .+...|..+|+++++|+++.... ..+|..+|+++++.|+++.+
T Consensus 341 ~vd~~~~Ts~p~IyAiGDv~~~~p---------~La~~A~~eg~~aa~~i~g~~~~--~~d~~~iP~~vft~PeiA~V-- 407 (542)
T 4b1b_A 341 IADHLSCTNIPSIFAVGDVAENVP---------ELAPVAIKAGEILARRLFKDSDE--IMDYSYIPTSIYTPIEYGAC-- 407 (542)
T ss_dssp CCCTTSBCSSTTEEECTTSBTTCC---------CCHHHHHHHHHHHHHHHHSCCCC--CCCCSSCCEEECSSSCEEEE--
T ss_pred eccccccccCCCeEEeccccCCch---------hHHHHHHHHHHHHHHHHhcCCCc--ccCCCCCceEEeCCCCeEEE--
Confidence 889999999999999999996532 35667889999999999986543 36788999999998988877
Q ss_pred ecCCCcE---------EEE-cC---CC------------------ccccCCcEEEEEE---eCCEEEEEEEecCChHHH-
Q 013890 360 GDNVGDT---------VLF-GD---ND------------------LASATHKFGTYWI---KDGKVVGVFLESGTPEEN- 404 (434)
Q Consensus 360 G~~~~~~---------~~~-~~---~~------------------~~~~~~~~~~~~~---~~~~ilG~~~~g~~~~~~- 404 (434)
|+++.+. ..+ .. .. ....+.+|+|+++ ++++|||+|++|++++|+
T Consensus 408 GlTE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI 487 (542)
T 4b1b_A 408 GYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVT 487 (542)
T ss_dssp ECCHHHHHHHHCTTTEEEEEC-----------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHH
T ss_pred eCCHHHHHHhCCCCcEEEEEeeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHH
Confidence 7664211 100 00 00 0023567888775 479999999999999997
Q ss_pred HHHHHHHHcCCCCCChhhhhccCCCccccC
Q 013890 405 KAIAKVARVQPSVESLDVLKNEGLSFASKI 434 (434)
Q Consensus 405 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 434 (434)
+.++.||++++|++||+.+.-++|+++|.+
T Consensus 488 ~~~alAi~~~~t~~dl~~~i~~HPTlsE~l 517 (542)
T 4b1b_A 488 QGMALALRLKVKKKDFDNCIGIHPTDAESF 517 (542)
T ss_dssp HHHHHHHHTCCBHHHHHHC-----------
T ss_pred HHHHHHHHcCCCHHHHhccCCcCCCHHHHH
Confidence 999999999999999999999999999864
No 19
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.9e-49 Score=377.29 Aligned_cols=351 Identities=24% Similarity=0.382 Sum_probs=276.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHHC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
.|++|||||+||++||..|++.| + |+|||+++..+|.++.+++.+........ ......+++++.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~---V~lie~~~~~~~~~~~l~~~~~g~~~~~~-----------~~~~~~~~~~~~ 73 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-E---VTVIDKEPVPYYSKPMLSHYIAGFIPRNR-----------LFPYSLDWYRKR 73 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-E---EEEECSSSSCCCCSTTHHHHHTTSSCGGG-----------GCSSCHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-C---EEEEECCCCCccccchhHHHHhCCCCHHH-----------hccCCHHHHHhC
Confidence 58999999999999999999887 5 99999998877776665442211000000 123456788889
Q ss_pred CcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCc
Q 013890 86 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGK 165 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~ 165 (434)
+++++.+++++.++++.++|. .+++++.||+||||||++|+.|+ ++| .++++++++..++..+.+.+. ++++
T Consensus 74 ~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~~p~---i~G--~~~v~~~~~~~~~~~l~~~~~--~~~~ 145 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARAREPQ---IKG--KEYLLTLRTIFDADRIKESIE--NSGE 145 (367)
T ss_dssp TEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEECCCC---SBT--GGGEECCCSHHHHHHHHHHHH--HHSE
T ss_pred CcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCCCCC---CCC--cCCEEEEcCHHHHHHHHHHhh--cCCc
Confidence 999999988999999888888 67788999999999999999887 465 356888889999888877664 2589
Q ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeC
Q 013890 166 AVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLK 245 (434)
Q Consensus 166 vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~ 245 (434)
++|||+|++|+|+|..|.+.|.+|+++++.+++++ +++++.+.+.+.+++.||++++++++++++. + .+.++
T Consensus 146 vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~--~----~v~~~ 217 (367)
T 1xhc_A 146 AIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG--LDEELSNMIKDMLEETGVKFFLNSELLEANE--E----GVLTN 217 (367)
T ss_dssp EEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT--CCHHHHHHHHHHHHHTTEEEECSCCEEEECS--S----EEEET
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc--CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe--e----EEEEC
Confidence 99999999999999999999999999999999888 7999999999999999999999999999963 2 47788
Q ss_pred CCcEEEcCEEEEccCCccChhhhhc-cccccCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHH
Q 013890 246 DGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQ 324 (434)
Q Consensus 246 ~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~ 324 (434)
+|+ +++|.|++|+|++|++++++. ++..+ ++|.||+++||+.|+|||+|||+..... ...++..|..||+.
T Consensus 218 ~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~gi~Vd~~~~t~~~~IyA~GD~a~~~~~------~~~~~~~A~~qg~~ 289 (367)
T 1xhc_A 218 SGF-IEGKVKICAIGIVPNVDLARRSGIHTG-RGILIDDNFRTSAKDVYAIGDCAEYSGI------IAGTAKAAMEQARV 289 (367)
T ss_dssp TEE-EECSCEEEECCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEBTTB------CCCSHHHHHHHHHH
T ss_pred CCE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CCEEECCCcccCCCCEEEeEeeeecCCC------CccHHHHHHHHHHH
Confidence 887 999999999999999987643 55555 4599999999999999999999975321 11578899999999
Q ss_pred HHHHHhccCCCCcccCCCCC-CeeEEeecCcceEEeecCCCcEEEEcCCCccccCCcEEEEEEeCCEEEEEEEecCChHH
Q 013890 325 AVKTIMATEGGKTVTGYDYL-PYFYSRAFDLSWQFYGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEE 403 (434)
Q Consensus 325 aa~~i~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~~g~~~~~ 403 (434)
||+||.+.. ..|... |+.+..+++..+..+|.++.+...+ .+|+|+++++++|+|++++|+.+ +
T Consensus 290 aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~---------~~~~k~~~~~~~ilG~~~~g~~~-~ 354 (367)
T 1xhc_A 290 LADILKGEP-----RRYNFKFRSTVFKFGKLQIAIIGNTKGEGKWI---------EDNTKVFYENGKIIGAVVFNDIR-K 354 (367)
T ss_dssp HHHHHTTCC-----CCCCSSCCEEEEEETTEEEEEEECCSSCEEEE---------ETTEEEEC-----CEEEEESCHH-H
T ss_pred HHHHhcCCC-----ccCCCCCCceEEEECCceEEEECCCCCCCccc---------ceEEEEEEECCEEEEEEEECChH-H
Confidence 999998743 344443 4444577788888889887643322 46899988899999999999653 3
Q ss_pred HHHHHHH
Q 013890 404 NKAIAKV 410 (434)
Q Consensus 404 ~~~~~~~ 410 (434)
...+..+
T Consensus 355 ~~~~~~~ 361 (367)
T 1xhc_A 355 ATKLEKE 361 (367)
T ss_dssp HHHHC--
T ss_pred HHHHHHH
Confidence 4333333
No 20
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-51 Score=403.73 Aligned_cols=401 Identities=15% Similarity=0.219 Sum_probs=292.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC-C--CCCCccccccCCC----CCCCCCCcceec-----C
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP-Y--ERPALSKAYLFPE----GTARLPGFHVCV-----G 71 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~-~--~~~~~~~~~~~~~----~~~~~~~~~~~~-----~ 71 (434)
.++||+|||||++|+++|..|++.|++ |+|||++.... + ..|.+++.++... .......+.... .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAK---TLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDK 86 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCc---EEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccc
Confidence 468999999999999999999999887 99999985310 0 0011111110000 000000000000 0
Q ss_pred --CC-CC---------------CCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCCc--EEEeceEEEccCCCcccc-c
Q 013890 72 --SG-GE---------------RLLPEWYKEKGIELILSTEIVRADIASKTLLSATGL--IFKYQILVIATGSTVLRL-T 130 (434)
Q Consensus 72 --~~-~~---------------~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~--~~~~d~lilAtG~~~~~p-~ 130 (434)
.. .. ..+...+++.+++++.+ .+..++.....+...+++ ++.||+||+|||++|..| +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~ 165 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFG-WARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPEN 165 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEE-EEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTT
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCC
Confidence 00 00 01123455679999987 566666544455556665 799999999999999888 6
Q ss_pred CCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHH
Q 013890 131 DFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAF 210 (434)
Q Consensus 131 ~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 210 (434)
++|.+ .++ +..+...+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.
T Consensus 166 ---i~g~~--~~~---~~~~~~~l-----~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~ 231 (479)
T 2hqm_A 166 ---IPGFE--LGT---DSDGFFRL-----EEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDECIQNT 231 (479)
T ss_dssp ---STTGG--GSB---CHHHHHHC-----SSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHH
T ss_pred ---CCCcc--ccc---chHHHhcc-----cccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-cCHHHHHH
Confidence 45542 122 33333322 125799999999999999999999999999999999998876 79999999
Q ss_pred HHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCC-cEEEcCEEEEccCCccChhh-hh-ccccc-cCCcEEeCCCCC
Q 013890 211 YEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDG-RTLEADIVVVGVGGRPLISL-FK-GQVAE-NKGGIETDDFFK 286 (434)
Q Consensus 211 ~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g-~~i~~d~vv~a~G~~p~~~~-~~-~~~~~-~~g~i~vd~~~~ 286 (434)
+.+.+++.||++++++.|++++.++++.+..+.+++| +++++|.||+|+|++|++.+ ++ .++.. .+|+|.||+++|
T Consensus 232 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~ 311 (479)
T 2hqm_A 232 ITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQN 311 (479)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCB
T ss_pred HHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCc
Confidence 9999999999999999999998744443457888899 78999999999999999965 43 35666 568999999999
Q ss_pred CCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCC-CCcccCCCCCCeeEEeecCcceEEeecCCCc
Q 013890 287 TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG-GKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD 365 (434)
Q Consensus 287 t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~ 365 (434)
|+.|+|||+|||++.+ .++..|..||+.||.||++... ......|..+|+..++.|++..+ |+++.+
T Consensus 312 t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~v--Gl~e~~ 379 (479)
T 2hqm_A 312 TNVPNIYSLGDVVGKV----------ELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSI--GISEKE 379 (479)
T ss_dssp CSSTTEEECGGGTTSS----------CCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEECCSSCEEEE--ECCHHH
T ss_pred cCCCCEEEEEecCCCc----------ccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEECCCCeEEE--eCCHHH
Confidence 9999999999998643 4678899999999999997541 01125677789877776766655 655321
Q ss_pred --------EEEE-----cCCCc---cccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhcc
Q 013890 366 --------TVLF-----GDNDL---ASATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNE 426 (434)
Q Consensus 366 --------~~~~-----~~~~~---~~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~ 426 (434)
.+.. ..... ...+.+|+|+++ ++|+|||+|++|+.++++ +.++.||++++|++||..+..+
T Consensus 380 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~ 459 (479)
T 2hqm_A 380 AIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAI 459 (479)
T ss_dssp HHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCC
T ss_pred HHhcCCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCC
Confidence 0111 11111 123567999888 479999999999999886 9999999999999999999999
Q ss_pred CCCccccC
Q 013890 427 GLSFASKI 434 (434)
Q Consensus 427 ~~~~~~~~ 434 (434)
.++++|.+
T Consensus 460 hPt~~e~~ 467 (479)
T 2hqm_A 460 HPTSAEEL 467 (479)
T ss_dssp SSCSGGGG
T ss_pred CCChHHHH
Confidence 99998853
No 21
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=9.7e-51 Score=403.97 Aligned_cols=400 Identities=20% Similarity=0.245 Sum_probs=295.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC----CCCCccccccCCCC-------CCC---CCCcce
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY----ERPALSKAYLFPEG-------TAR---LPGFHV 68 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~----~~~~~~~~~~~~~~-------~~~---~~~~~~ 68 (434)
+.++||+|||||++|+++|.+|++.|++ |+|||+++.... ..+.+++.++.... ... ++....
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~---V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 117 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGR---QLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTE 117 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHh
Confidence 4568999999999999999999999887 999999973211 01111121110000 000 000000
Q ss_pred e------cCCCCCCCCH---hHH-----HHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCC
Q 013890 69 C------VGSGGERLLP---EWY-----KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGV 134 (434)
Q Consensus 69 ~------~~~~~~~~~~---~~~-----~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i 134 (434)
. .......... +++ .+.+++++....+..++. +++.+. +..+.||++|+|||+.|..|+ +
T Consensus 118 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~~p~---i 191 (523)
T 1mo9_A 118 KVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPGTLD---V 191 (523)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECCCCC---S
T ss_pred hhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCCCCC---C
Confidence 0 0000000122 455 678999983447777775 567665 678999999999999999887 5
Q ss_pred CCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHH
Q 013890 135 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 214 (434)
Q Consensus 135 ~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (434)
+|.+..++++.. ++. +.+...++++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.
T Consensus 192 ~G~~~~~v~~~~---~~~---~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~ 264 (523)
T 1mo9_A 192 PGVNAKGVFDHA---TLV---EELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-KDNETRAYVLDR 264 (523)
T ss_dssp TTTTSBTEEEHH---HHH---HHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-CSHHHHHHHHHH
T ss_pred CCcccCcEeeHH---HHH---HHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-ccHHHHHHHHHH
Confidence 666555676533 222 1122223399999999999999999999999999999999998886 799999999999
Q ss_pred HHHcCcEEEcCCeEEEEEecCCCcE--EEEEeCCCc-EEEcCEEEEccCCccChh-hhh-ccccc-cCCcEEeCCCCCCC
Q 013890 215 YANKGIKIIKGTVAVGFTTNADGEV--NEVKLKDGR-TLEADIVVVGVGGRPLIS-LFK-GQVAE-NKGGIETDDFFKTS 288 (434)
Q Consensus 215 l~~~gV~~~~~~~v~~i~~~~~g~~--~~v~~~~g~-~i~~d~vv~a~G~~p~~~-~~~-~~~~~-~~g~i~vd~~~~t~ 288 (434)
+++.||++++++.|+++..++++.+ ..|.+++|+ ++++|.||+|+|++|+++ +++ .++.. .+|+|.||+++||+
T Consensus 265 l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t~ 344 (523)
T 1mo9_A 265 MKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTS 344 (523)
T ss_dssp HHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBCS
T ss_pred HHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCccC
Confidence 9999999999999999987445543 467788887 899999999999999998 564 46766 57889999999999
Q ss_pred CCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC----
Q 013890 289 ADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG---- 364 (434)
Q Consensus 289 ~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~---- 364 (434)
+|+|||+|||++.+ ..+..|..||+.||.||++... ...+..+|+++++.|+++. +|+++.
T Consensus 345 ~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~---~~~~~~~p~~~~~~~~~a~--vG~~e~~a~~ 409 (523)
T 1mo9_A 345 VPNVYAVGDLIGGP----------MEMFKARKSGCYAARNVMGEKI---SYTPKNYPDFLHTHYEVSF--LGMGEEEARA 409 (523)
T ss_dssp STTEEECGGGGCSS----------CSHHHHHHHHHHHHHHHTTCCC---CCCCCSCCEEEESSSEEEE--EECCHHHHHH
T ss_pred CCCEEEEeecCCCc----------ccHHHHHHHHHHHHHHHcCCCC---CCCCCCCCeEEECCCceEE--EeCCHHHHHh
Confidence 99999999999764 3567799999999999997431 1347778988876666554 476642
Q ss_pred --cEEEEcC--C-C----------------c---c--ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCC
Q 013890 365 --DTVLFGD--N-D----------------L---A--SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQP 415 (434)
Q Consensus 365 --~~~~~~~--~-~----------------~---~--~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~ 415 (434)
..+.... . . + . .+..+|+|+++ ++++|||+|++|+.++++ +.++.||++++
T Consensus 410 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~ 489 (523)
T 1mo9_A 410 AGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGL 489 (523)
T ss_dssp TTCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCC
Confidence 1122111 1 1 0 0 23467999888 479999999999998886 99999999999
Q ss_pred CCCChhhh--hccCCCcccc
Q 013890 416 SVESLDVL--KNEGLSFASK 433 (434)
Q Consensus 416 ~~~~~~~~--~~~~~~~~~~ 433 (434)
|++||..+ ..+.+++++.
T Consensus 490 t~~~l~~~~~~~~~Pt~~e~ 509 (523)
T 1mo9_A 490 TVDELGDMDELFLNPTHFIQ 509 (523)
T ss_dssp BHHHHHTSCCCSSCSCCHHH
T ss_pred CHHHHHhCCcceECCCHHHH
Confidence 99999998 8888888764
No 22
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=2.3e-49 Score=391.06 Aligned_cols=408 Identities=23% Similarity=0.351 Sum_probs=307.4
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCC-----CCCCcce---e--cCC
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTA-----RLPGFHV---C--VGS 72 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~--~~~ 72 (434)
+..+||||||||+||++||..|++.+. ..+|+|||+++.++|.+|++++.++...... .++.+.. . ...
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~-g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDP-GARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHST-TCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCC-CCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccc
Confidence 346899999999999999999998742 3459999999988999988888776543210 0000000 0 000
Q ss_pred -CCCCCCHhH--HHHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCC-CCCEEEEeCH
Q 013890 73 -GGERLLPEW--YKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD-AKNIFYLREI 148 (434)
Q Consensus 73 -~~~~~~~~~--~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~-~~~v~~~~~~ 148 (434)
.......++ +.+.+++++.++.|+.++++.++|.+.++.++.||+||||||++|+.|+.++..... ..+++++++.
T Consensus 88 ~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~ 167 (493)
T 1m6i_A 88 PSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKI 167 (493)
T ss_dssp GGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSH
T ss_pred hHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCCcccccccccCceEEEcCH
Confidence 000000111 125689999999999999988999999999999999999999999877632110001 2468888899
Q ss_pred HHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHH----CCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEc
Q 013890 149 DDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKI----NNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIK 224 (434)
Q Consensus 149 ~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~ 224 (434)
.++..+...+. .+++++|||+|++|+|+|..|.+ .|.+|+++.+.+.++.+.+++++.+.+.+.++++||++++
T Consensus 168 ~d~~~l~~~~~--~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~ 245 (493)
T 1m6i_A 168 GDFRSLEKISR--EVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMP 245 (493)
T ss_dssp HHHHHHHHHHH--HCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEEC
T ss_pred HHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEe
Confidence 99888877665 47899999999999999999887 5789999998887777778899999999999999999999
Q ss_pred CCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhhhc-ccccc--CCcEEeCCCCCCCCCceEEecccccc
Q 013890 225 GTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAEN--KGGIETDDFFKTSADDVYAVGDVATF 301 (434)
Q Consensus 225 ~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~~--~g~i~vd~~~~t~~~~iya~Gd~~~~ 301 (434)
++.|++++.+ ++. ..+.+.+|+++++|.||+|+|++|++++++. ++..+ +|+|.||+++|| .|+|||+|||+..
T Consensus 246 ~~~V~~i~~~-~~~-~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~a~~ 322 (493)
T 1m6i_A 246 NAIVQSVGVS-SGK-LLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDAACF 322 (493)
T ss_dssp SCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGGEEE
T ss_pred CCEEEEEEec-CCe-EEEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc-CCCeeEeeeeEec
Confidence 9999999862 333 4688899999999999999999999987754 56664 489999999999 6999999999987
Q ss_pred cccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeec-CcceEEeecCCCcEEEEc----------
Q 013890 302 PMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAF-DLSWQFYGDNVGDTVLFG---------- 370 (434)
Q Consensus 302 ~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~G~~~~~~~~~~---------- 370 (434)
+....+.. ++++|..|..||+.||.||++.. .+|...|++|+.++ ...+..+|.........|
T Consensus 323 ~~~~~g~~-~~~~~~~A~~qg~~aa~ni~g~~-----~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~G~~~~~~~~~~ 396 (493)
T 1m6i_A 323 YDIKLGRR-RVEHHDHAVVSGRLAGENMTGAA-----KPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDN 396 (493)
T ss_dssp EETTTEEE-CCCCHHHHHHHHHHHHHHHTSCC-----CCCCCCCEEEEESSTTCEEEEEECCCTTSCEEEEEECCCTTCS
T ss_pred cCcccCcc-ccchHHHHHHHHHHHHHHhcCCC-----CCcCCcCceeeeeccCcceEEEeccCCCcceEEeecccccccc
Confidence 65544433 55789999999999999999753 67889999999886 454444443110000000
Q ss_pred ---------------------------------CCC--c-cccCCcEEEEEEeCCEEEEEEEecCChHHHHHHHHHHHcC
Q 013890 371 ---------------------------------DND--L-ASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQ 414 (434)
Q Consensus 371 ---------------------------------~~~--~-~~~~~~~~~~~~~~~~ilG~~~~g~~~~~~~~~~~~i~~~ 414 (434)
+.+ . ......|..+++++|+|+|+.++| ...++..+..+|+.+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~li~~~ 475 (493)
T 1m6i_A 397 PKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWN-IFNRMPIARKIIKDG 475 (493)
T ss_dssp HHHHHHHHSCSCHHHHSCSCCCC--------------------CCEEEEEEEETTEEEEEEEES-CCSCHHHHHHHHHHC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccCCcEEEEEEeCCEEEEEEEec-CcchHHHHHHHHhCC
Confidence 000 0 001234567888999999999998 567888899999999
Q ss_pred CCCCChhhh
Q 013890 415 PSVESLDVL 423 (434)
Q Consensus 415 ~~~~~~~~~ 423 (434)
.+++++..+
T Consensus 476 ~~~~~~~~~ 484 (493)
T 1m6i_A 476 EQHEDLNEV 484 (493)
T ss_dssp CBCSCSTTG
T ss_pred CCCCCHHHH
Confidence 999888765
No 23
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=4.3e-49 Score=388.52 Aligned_cols=399 Identities=20% Similarity=0.216 Sum_probs=290.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCCccccccCCCC----CC--CCCCcceecCC-
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG----TA--RLPGFHVCVGS- 72 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~----~~--~~~~~~~~~~~- 72 (434)
.++||+|||||+||+++|..|++.|++ |+|||+++..+.. .+.+++.++.... .. .+..+......
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~ 81 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFK---TVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEV 81 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCC
Confidence 358999999999999999999999887 9999998643210 0111111110000 00 00000000000
Q ss_pred --CC--------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCC-C-cEEEeceEEEccCCCcccccCCCC
Q 013890 73 --GG--------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSAT-G-LIFKYQILVIATGSTVLRLTDFGV 134 (434)
Q Consensus 73 --~~--------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-~-~~~~~d~lilAtG~~~~~p~~~~i 134 (434)
.. .....+++++.+++++.++ +..++.....|...+ + .++.||+||+|||++|..|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i--- 157 (474)
T 1zmd_A 82 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGY-GKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPG--- 157 (474)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTT---
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCC---
Confidence 00 0012355667899999984 455665444565555 4 579999999999999988874
Q ss_pred CCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHH
Q 013890 135 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 214 (434)
Q Consensus 135 ~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (434)
+|.+..++++ ..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++..+++++.+.+.+.
T Consensus 158 ~g~~~~~v~t---~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~ 229 (474)
T 1zmd_A 158 ITIDEDTIVS---STGALSL----K-KVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRI 229 (474)
T ss_dssp CCCCSSSEEC---HHHHTTC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHH
T ss_pred CCCCcCcEEc---HHHHhhc----c-ccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHH
Confidence 5544345553 3333322 1 147899999999999999999999999999999999998844899999999999
Q ss_pred HHHcCcEEEcCCeEEEEEecCCCcEEEEE-----eCCCcEEEcCEEEEccCCccChhh--hh-ccccc-cCCcEEeCCCC
Q 013890 215 YANKGIKIIKGTVAVGFTTNADGEVNEVK-----LKDGRTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETDDFF 285 (434)
Q Consensus 215 l~~~gV~~~~~~~v~~i~~~~~g~~~~v~-----~~~g~~i~~d~vv~a~G~~p~~~~--~~-~~~~~-~~g~i~vd~~~ 285 (434)
+++.||++++++.|.+++.++++.+ .+. ..+++++++|.||+|+|++|++++ ++ .++.. .+|+|.||+++
T Consensus 230 l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 308 (474)
T 1zmd_A 230 LQKQGFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRF 308 (474)
T ss_dssp HHHTTCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTC
T ss_pred HHHCCCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCC
Confidence 9999999999999999987433322 344 356678999999999999999986 33 36666 46889999999
Q ss_pred CCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCCc
Q 013890 286 KTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD 365 (434)
Q Consensus 286 ~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~ 365 (434)
||+.|+|||+|||+..+ ..+..|..||+.||.||++... ...|..+|+++++.|+++ .+|+++.+
T Consensus 309 ~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~---~~~~~~~p~~~~~~~~~a--~vG~~e~~ 373 (474)
T 1zmd_A 309 QTKIPNIYAIGDVVAGP----------MLAHKAEDEGIICVEGMAGGAV---HIDYNCVPSVIYTHPEVA--WVGKSEEQ 373 (474)
T ss_dssp BCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTTCCC---CCCGGGCCEEECSSSEEE--EEECCHHH
T ss_pred ccCCCCEEEeeecCCCC----------ccHHHHHHHHHHHHHHhcCCCC---cCCCCCCCEEEECCCCeE--EEeCCHHH
Confidence 99999999999999754 4577899999999999997531 256778898776656554 45776521
Q ss_pred ------EEEEcCC-----Ccc---ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCC
Q 013890 366 ------TVLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGL 428 (434)
Q Consensus 366 ------~~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 428 (434)
.+..... .+. .+..+|+|++++ +|+|||++++|+.+.++ +.++.+|++++|++||..+..+.+
T Consensus 374 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~P 453 (474)
T 1zmd_A 374 LKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHP 453 (474)
T ss_dssp HHHHTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTT
T ss_pred HHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCC
Confidence 1222111 111 245689999885 79999999999998886 999999999999999999999999
Q ss_pred Ccccc
Q 013890 429 SFASK 433 (434)
Q Consensus 429 ~~~~~ 433 (434)
+|++.
T Consensus 454 t~~e~ 458 (474)
T 1zmd_A 454 TLSEA 458 (474)
T ss_dssp CTHHH
T ss_pred CHHHH
Confidence 98764
No 24
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1e-50 Score=400.79 Aligned_cols=398 Identities=19% Similarity=0.242 Sum_probs=289.3
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHH-cCCCCCcEEEEeC--------CCCCCC----CCCCccccccCCCC----CCCCC
Q 013890 2 AEKSFKYVILGGGVSAGYAAREFAK-QGVKPGELAIISK--------EAVAPY----ERPALSKAYLFPEG----TARLP 64 (434)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~l~~-~g~~~~~V~vie~--------~~~~~~----~~~~~~~~~~~~~~----~~~~~ 64 (434)
|++++||+|||||+||++||..|++ .|++ |+|||+ ....+. ..|.+++.++.... ....+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~---V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~ 80 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKR---VAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESA 80 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCC---EEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCe---EEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHH
Confidence 3446899999999999999999999 8987 999993 211110 00111111110000 00000
Q ss_pred CcceecCCC----CC---------------CCCHhHHHHC-CcEEEcCCeEEEEeCCCCEEEcC---C-----CcEEEec
Q 013890 65 GFHVCVGSG----GE---------------RLLPEWYKEK-GIELILSTEIVRADIASKTLLSA---T-----GLIFKYQ 116 (434)
Q Consensus 65 ~~~~~~~~~----~~---------------~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~---~-----~~~~~~d 116 (434)
.+....... .. ..+...+++. +++++.+ .+..++ .++|.+. + ++.+.||
T Consensus 81 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g-~~~~i~--~~~v~v~~~~~~~~~~~~~~~~d 157 (495)
T 2wpf_A 81 GFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLG-WGSLES--KNVVVVRETADPKSAVKERLQAD 157 (495)
T ss_dssp TTTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEES-EEEEEE--TTEEEEESSSSTTSCEEEEEEEE
T ss_pred hcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe-EEEEee--CCEEEEeecCCccCCCCeEEEcC
Confidence 000000000 00 0112234566 9999998 566665 4666664 4 6689999
Q ss_pred eEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHC---CCeEEEEe
Q 013890 117 ILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKIN---NIDVSMVY 193 (434)
Q Consensus 117 ~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~---g~~v~~~~ 193 (434)
+||||||++|..|+ ++|.+ .+++ ..++..+ ...+++++|||+|++|+|+|..|.++ |.+|++++
T Consensus 158 ~lViATGs~p~~p~---i~G~~--~~~~---~~~~~~~-----~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~ 224 (495)
T 2wpf_A 158 HILLATGSWPQMPA---IPGIE--HCIS---SNEAFYL-----PEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCY 224 (495)
T ss_dssp EEEECCCEEECCCC---CTTGG--GCEE---HHHHTTC-----SSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEEEeCCCCcCCCC---CCCcc--cccc---HHHHHhh-----hhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEE
Confidence 99999999999887 45542 2333 3333222 11478999999999999999999999 99999999
Q ss_pred eCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhh---hc
Q 013890 194 PEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLF---KG 270 (434)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~---~~ 270 (434)
+.+++++. +++++.+.+.+.+++.||++++++.|.+++.++++ ...+.+.+|+++++|.||+|+|++|+++.+ ..
T Consensus 225 ~~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~ 302 (495)
T 2wpf_A 225 RNNLILRG-FDETIREEVTKQLTANGIEIMTNENPAKVSLNTDG-SKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNV 302 (495)
T ss_dssp SSSSSCTT-SCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTS-CEEEEETTSCEEEESEEEECSCEEECCGGGTGGGT
T ss_pred cCCccccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCc-eEEEEECCCcEEEcCEEEECCCCcccccccchhhc
Confidence 99998886 79999999999999999999999999999874333 356888899899999999999999999743 33
Q ss_pred cccc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEE
Q 013890 271 QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYS 349 (434)
Q Consensus 271 ~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~ 349 (434)
++.. ++|+|.||+++||++|+|||+|||++.+ .++..|..||++||.||++.... ...|..+|+..+
T Consensus 303 gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~ 370 (495)
T 2wpf_A 303 GVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRL----------MLTPVAINEGAALVDTVFGNKPR--KTDHTRVASAVF 370 (495)
T ss_dssp TCCBCTTSSBCCCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHHHHHHHHHHSSCCC--CCCCSSCEEEEC
T ss_pred CccCCCCCCEEECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHHHHHHHHhcCCCCC--cCCCCCCCEEEE
Confidence 5666 4788999999999999999999999643 56788999999999999975322 256777887776
Q ss_pred eecCcceEEeecCCCc------EEEEcC--CCc------cccCCcE-EEEEEe--CCEEEEEEEecCChHHH-HHHHHHH
Q 013890 350 RAFDLSWQFYGDNVGD------TVLFGD--NDL------ASATHKF-GTYWIK--DGKVVGVFLESGTPEEN-KAIAKVA 411 (434)
Q Consensus 350 ~~~~~~~~~~G~~~~~------~~~~~~--~~~------~~~~~~~-~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i 411 (434)
+.++++. +|+++.+ .+.... ... .....+| +|++++ +|+|||+|++|++++++ +.++.+|
T Consensus 371 ~~~~~a~--vGl~e~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai 448 (495)
T 2wpf_A 371 SIPPIGT--CGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCL 448 (495)
T ss_dssp CSSCEEE--EECCHHHHHHHSSEEEEEEEEECCTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHH
T ss_pred CCCCeEE--EeCCHHHHHhcCCCEEEEEEecCchhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHH
Confidence 6665554 4766421 121111 110 1246789 998884 79999999999999886 9999999
Q ss_pred HcCCCCCChhhhhccCCCccccC
Q 013890 412 RVQPSVESLDVLKNEGLSFASKI 434 (434)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~ 434 (434)
++++|++||..+.-+.+++++.+
T Consensus 449 ~~~~t~~~l~~~~~~hPt~~e~~ 471 (495)
T 2wpf_A 449 RLNAKISDFYNTIGVHPTSAEEL 471 (495)
T ss_dssp HTTCBHHHHHHSCCCSSCSGGGG
T ss_pred HCCCCHHHHhhcccCCCChHHHH
Confidence 99999999999999999998753
No 25
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=9.2e-50 Score=392.07 Aligned_cols=400 Identities=16% Similarity=0.165 Sum_probs=291.9
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCCccccccCCCC----------CCCCCCcc
Q 013890 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG----------TARLPGFH 67 (434)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~----------~~~~~~~~ 67 (434)
|+++|||+|||||+||+++|..|++.|++ |+|||+.+..+.. .+.+++.++.... ......+.
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~---V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~ 77 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYN---VLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFS 77 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHH
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHH
Confidence 33469999999999999999999999987 9999977643211 1111111110000 00000000
Q ss_pred eecC-CC----CC--CCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCCcE--EEeceEEEccCCCcccccCCCCCCCC
Q 013890 68 VCVG-SG----GE--RLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLI--FKYQILVIATGSTVLRLTDFGVEGAD 138 (434)
Q Consensus 68 ~~~~-~~----~~--~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~--~~~d~lilAtG~~~~~p~~~~i~g~~ 138 (434)
.... .. .. .....++++.+++++.+ .+..++.....|...++++ +.||+||+|||+.|..|+. +|.+
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i---~G~~ 153 (466)
T 3l8k_A 78 TVQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRL---PGVE 153 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCC---TTGG
T ss_pred HHHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCC---CCcc
Confidence 0000 00 00 11223344568999987 7888887766777777877 9999999999999998884 5543
Q ss_pred CCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHc
Q 013890 139 AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANK 218 (434)
Q Consensus 139 ~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (434)
+++ +..++..+...+.. .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++..+++++.+.+.+.++
T Consensus 154 --~~~---t~~~~~~~~~~l~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~-- 225 (466)
T 3l8k_A 154 --YCL---TSDDIFGYKTSFRK-LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK-- 225 (466)
T ss_dssp --GSB---CHHHHHSTTCSCCS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC--
T ss_pred --ceE---eHHHHHHHHHHHhh-CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE--
Confidence 233 44444422211221 4789999999999999999999999999999999999987449999999988776
Q ss_pred CcEEEcCCeEEEEEecCCCcEEEEEeC--CCc--EEEcCEEEEccCCccChhh--hhccccc-cCCcEEeCCCCCCCCCc
Q 013890 219 GIKIIKGTVAVGFTTNADGEVNEVKLK--DGR--TLEADIVVVGVGGRPLISL--FKGQVAE-NKGGIETDDFFKTSADD 291 (434)
Q Consensus 219 gV~~~~~~~v~~i~~~~~g~~~~v~~~--~g~--~i~~d~vv~a~G~~p~~~~--~~~~~~~-~~g~i~vd~~~~t~~~~ 291 (434)
|++++++.+.+++.++++.+ .+.++ +|+ ++++|.|++|+|++|++++ ...++.. .+| |.||+++||++|+
T Consensus 226 -v~i~~~~~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~G-i~vd~~~~t~~~~ 302 (466)
T 3l8k_A 226 -LNIKFNSPVTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTG-IVVDETMKTNIPN 302 (466)
T ss_dssp -CCEECSCCEEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSS-BCCCTTCBCSSTT
T ss_pred -EEEEECCEEEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCC-EeECCCccCCCCC
Confidence 99999999999987431333 46776 676 8999999999999999983 3446766 466 9999999999999
Q ss_pred eEEecccccccccccCcccccccHHHHHHHHHHHHHHHhcc--CCCCcccCCCCCCeeEEeecCcceEEeecCCCc----
Q 013890 292 VYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT--EGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD---- 365 (434)
Q Consensus 292 iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~---- 365 (434)
|||+|||++.+ +++..|..||+.||.||++. ... ...+..+|+.+++.|+++.+ |+++.+
T Consensus 303 Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~--~~~~~~~p~~~~~~~~~a~v--G~te~~a~~~ 368 (466)
T 3l8k_A 303 VFATGDANGLA----------PYYHAAVRMSIAAANNIMANGMPVD--YVDVKSIPVTIYTIPSLSYV--GILPSKARKM 368 (466)
T ss_dssp EEECGGGTCSC----------CSHHHHHHHHHHHHHHHHTTTSCCC--CCCSTTSCEEECSSSCEEEE--ECCHHHHHHH
T ss_pred EEEEEecCCCC----------ccHhHHHHHHHHHHHHHhCCCCCcc--ccCCCCCcEEEECCCCeEEe--cCCHHHHHhC
Confidence 99999999864 56788999999999999975 322 25677888877766665554 776521
Q ss_pred --EEEEc-----CCCcc---ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCCCccc
Q 013890 366 --TVLFG-----DNDLA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 366 --~~~~~-----~~~~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 432 (434)
.+... +..++ ...++|+|+++ ++|+|||+|++|+++.|+ +.++.||++++|++||..+..+.++|++
T Consensus 369 g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e 448 (466)
T 3l8k_A 369 GIEIVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNE 448 (466)
T ss_dssp TCCEEEEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTH
T ss_pred CCCEEEEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHH
Confidence 12221 11111 34678999888 469999999999999887 9999999999999999999999999987
Q ss_pred c
Q 013890 433 K 433 (434)
Q Consensus 433 ~ 433 (434)
.
T Consensus 449 ~ 449 (466)
T 3l8k_A 449 I 449 (466)
T ss_dssp H
T ss_pred H
Confidence 4
No 26
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=5.9e-50 Score=395.06 Aligned_cols=403 Identities=18% Similarity=0.200 Sum_probs=292.9
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCCccccccCCC----CCCCCCCcceecCCC--
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE----GTARLPGFHVCVGSG-- 73 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-- 73 (434)
+.++||+|||||++|++||..|++.|++ |+|||++...+ +..|.+++.++... .......+.......
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~---V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGAR---AAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKF 94 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 3469999999999999999999999987 99999875311 00011111111000 000000000000000
Q ss_pred C---------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCC
Q 013890 74 G---------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD 138 (434)
Q Consensus 74 ~---------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~ 138 (434)
. .......++..+++++.+ .+..++.....+. .+++++.||+||||||+.|..|....++|.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~ 172 (478)
T 3dk9_A 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG-HAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGAS 172 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCc
Confidence 0 001223345679999998 5566666556666 4667899999999999999888211255543
Q ss_pred CCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHc
Q 013890 139 AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANK 218 (434)
Q Consensus 139 ~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (434)
.+ .+..+...+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.
T Consensus 173 --~~---~~~~~~~~~-----~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~~~~~l~~~ 241 (478)
T 3dk9_A 173 --LG---ITSDGFFQL-----EELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS-FDSMISTNCTEELENA 241 (478)
T ss_dssp --GS---BCHHHHTTC-----CSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHT
T ss_pred --ee---EchHHhhch-----hhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc-cCHHHHHHHHHHHHHC
Confidence 11 233333221 114789999999999999999999999999999999998875 7999999999999999
Q ss_pred CcEEEcCCeEEEEEecCCCcEEEEEeCC---C----cEEEcCEEEEccCCccChhh--h-hccccc-cCCcEEeCCCCCC
Q 013890 219 GIKIIKGTVAVGFTTNADGEVNEVKLKD---G----RTLEADIVVVGVGGRPLISL--F-KGQVAE-NKGGIETDDFFKT 287 (434)
Q Consensus 219 gV~~~~~~~v~~i~~~~~g~~~~v~~~~---g----~~i~~d~vv~a~G~~p~~~~--~-~~~~~~-~~g~i~vd~~~~t 287 (434)
||++++++.+++++..+++....+.+.+ | +++++|.|++|+|++|+++. + ..++.. .+|+|.||+++||
T Consensus 242 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t 321 (478)
T 3dk9_A 242 GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT 321 (478)
T ss_dssp TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBC
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCccc
Confidence 9999999999999875555334566665 2 57999999999999999983 2 345666 6788999999999
Q ss_pred CCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCCc--
Q 013890 288 SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD-- 365 (434)
Q Consensus 288 ~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~-- 365 (434)
++|+|||+|||++.+ ..+..|..||+.||+||++.... ....|..+|+..++.|+++.+ |+++.+
T Consensus 322 ~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~-~~~~~~~~p~~~~~~p~~a~v--Glte~~a~ 388 (478)
T 3dk9_A 322 NVKGIYAVGDVCGKA----------LLTPVAIAAGRKLAHRLFEYKED-SKLDYNNIPTVVFSHPPIGTV--GLTEDEAI 388 (478)
T ss_dssp SSTTEEECGGGGCSS----------CCHHHHHHHHHHHHHHHHSCCTT-CCCCCTTCCEEECCSSCEEEE--ECCHHHHH
T ss_pred CCCCEEEEEecCCCC----------ccHhHHHHHHHHHHHHHcCCCCc-ccCCCCCCCeEEECCCceEEe--eCCHHHHH
Confidence 999999999999654 45778999999999999986321 136778899887776766655 766521
Q ss_pred -------EE----EEcCCCcc---ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCC
Q 013890 366 -------TV----LFGDNDLA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGL 428 (434)
Q Consensus 366 -------~~----~~~~~~~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 428 (434)
.. .+....++ ....+|+|+++ ++|+|||+|++|++++|+ +.++.||++++|++||..+.-+.+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hP 468 (478)
T 3dk9_A 389 HKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHP 468 (478)
T ss_dssp HHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSS
T ss_pred hhCCCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCC
Confidence 11 11111111 34678999887 579999999999999887 999999999999999999999999
Q ss_pred CccccC
Q 013890 429 SFASKI 434 (434)
Q Consensus 429 ~~~~~~ 434 (434)
+++|.+
T Consensus 469 t~~e~~ 474 (478)
T 3dk9_A 469 TSSEEL 474 (478)
T ss_dssp SSGGGG
T ss_pred ChHHHH
Confidence 999864
No 27
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.7e-50 Score=397.68 Aligned_cols=398 Identities=24% Similarity=0.282 Sum_probs=285.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCCccccccCCCC-----CCCCCCcceecCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG-----TARLPGFHVCVGSGG 74 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 74 (434)
+++||+|||||+||++||..|+++|++ |+|||+.+..+.. .|.+++.++.... ...+..+........
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMK---VAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPK 100 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCc
Confidence 359999999999999999999999987 9999987543210 0111111110000 000011100000000
Q ss_pred -----------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCC--cEEEeceEEEccCCCcccccCCCCC
Q 013890 75 -----------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFGVE 135 (434)
Q Consensus 75 -----------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lilAtG~~~~~p~~~~i~ 135 (434)
......++++.+++++.+ ....++.....+...++ .++.||++|||||+.|. +.++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~--~ipg~~ 177 (491)
T 3urh_A 101 LNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQG-TGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVA--GIPGVE 177 (491)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECSSSEEEEECTTSCEEEEECSEEEECCCEECC--CBTTBC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCC--CCCCcc
Confidence 011234456689999998 44445544445555565 57999999999999874 322232
Q ss_pred C-CCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHH
Q 013890 136 G-ADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 214 (434)
Q Consensus 136 g-~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (434)
. .+...++ +..+...+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.
T Consensus 178 ~~~~~~~~~---~~~~~~~~-----~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~ 248 (491)
T 3urh_A 178 VAFDEKTIV---SSTGALAL-----EKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-MDGEVAKQLQRM 248 (491)
T ss_dssp CCCCSSSEE---CHHHHTSC-----SSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-SCHHHHHHHHHH
T ss_pred cccCCeeEE---ehhHhhhh-----hhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-CCHHHHHHHHHH
Confidence 1 1223344 33332221 125789999999999999999999999999999999999886 799999999999
Q ss_pred HHHcCcEEEcCCeEEEEEecCCCcEEEEEeCC---C--cEEEcCEEEEccCCccChhhh---hccccc-cCCcEEeCCCC
Q 013890 215 YANKGIKIIKGTVAVGFTTNADGEVNEVKLKD---G--RTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFF 285 (434)
Q Consensus 215 l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~---g--~~i~~d~vv~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~ 285 (434)
+++.||++++++.+.+++.++++ ..+.+.+ | +++++|.||+|+|++|+++++ ..++.. .+|+|.||+++
T Consensus 249 l~~~gV~v~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 326 (491)
T 3urh_A 249 LTKQGIDFKLGAKVTGAVKSGDG--AKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHF 326 (491)
T ss_dssp HHHTTCEEECSEEEEEEEEETTE--EEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTC
T ss_pred HHhCCCEEEECCeEEEEEEeCCE--EEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCC
Confidence 99999999999999999874333 3455542 4 579999999999999999863 346666 57889999999
Q ss_pred CCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC-
Q 013890 286 KTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG- 364 (434)
Q Consensus 286 ~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~- 364 (434)
||++|+|||+|||++.+ ..+..|..||+.||.||++... ...+..+|+..+..|+++. +|+++.
T Consensus 327 ~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~---~~~~~~~p~~~~~~p~~a~--vGlte~~ 391 (491)
T 3urh_A 327 QTSIAGVYAIGDVVRGP----------MLAHKAEDEGVAVAEIIAGQAG---HVNYDVIPGVVYTQPEVAS--VGKTEEE 391 (491)
T ss_dssp BCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTTSCC---CCCTTCCCEEECSSSCEEE--EECCHHH
T ss_pred CCCCCCEEEEEecCCCc----------cchhHHHHHHHHHHHHHcCCCc---ccCCCCCCEEEEccCCeEE--EeCCHHH
Confidence 99999999999999754 4678899999999999998542 2567788987766565554 477652
Q ss_pred -----cEEEEcCCC-----cc---ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCC
Q 013890 365 -----DTVLFGDND-----LA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGL 428 (434)
Q Consensus 365 -----~~~~~~~~~-----~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 428 (434)
..+..+..+ ++ ..+.+|+|+++ ++|+|||+|++|++++|+ +.++.||++++|++||..+.-+.+
T Consensus 392 a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hP 471 (491)
T 3urh_A 392 LKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCHAHP 471 (491)
T ss_dssp HHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSS
T ss_pred HHhCCCCEEEEEEecCcchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCC
Confidence 222222211 11 34678999888 479999999999999887 999999999999999999999999
Q ss_pred Ccccc
Q 013890 429 SFASK 433 (434)
Q Consensus 429 ~~~~~ 433 (434)
+++|.
T Consensus 472 t~~e~ 476 (491)
T 3urh_A 472 TMSEA 476 (491)
T ss_dssp CTTHH
T ss_pred ChHHH
Confidence 98874
No 28
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.8e-49 Score=391.56 Aligned_cols=395 Identities=20% Similarity=0.234 Sum_probs=288.1
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCCccccccCC---------CCCCCCCCcc
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFP---------EGTARLPGFH 67 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~---------~~~~~~~~~~ 67 (434)
+|+.++||+|||||++|+++|..|++.|++ |+|||+++..+.. .+.+++.++.. .....++...
T Consensus 2 ~m~~~~dVvIIGaG~aGl~aA~~l~~~G~~---V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~ 78 (482)
T 1ojt_A 2 SADAEYDVVVLGGGPGGYSAAFAAADEGLK---VAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPE 78 (482)
T ss_dssp CSEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 355579999999999999999999999987 9999996543210 01111111100 0000000000
Q ss_pred eecCCCCC--------------CCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEc--CCC------------cEEEeceEE
Q 013890 68 VCVGSGGE--------------RLLPEWYKEKGIELILSTEIVRADIASKTLLS--ATG------------LIFKYQILV 119 (434)
Q Consensus 68 ~~~~~~~~--------------~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~--~~~------------~~~~~d~li 119 (434)
...... .....++++.+++++.++.+. ++ .+.+.+ .++ .++.||++|
T Consensus 79 --~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~--~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lV 153 (482)
T 1ojt_A 79 --PELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-LD--PHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCI 153 (482)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-EE--TTEEEEEEEEEEETTEEEEEEEEEEEEEEEEE
T ss_pred --CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-cc--CCEEEEEecCCcccccccccCcceEEEcCEEE
Confidence 000000 001244566899999986544 44 344433 344 579999999
Q ss_pred EccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC
Q 013890 120 IATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 199 (434)
Q Consensus 120 lAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~ 199 (434)
+|||+.|..|+. ++ .+ ..++ +..++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.++++
T Consensus 154 iAtGs~p~~~~~--i~-~~-~~v~---~~~~~~~~~-----~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l 221 (482)
T 1ojt_A 154 IAAGSRVTKLPF--IP-ED-PRII---DSSGALALK-----EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM 221 (482)
T ss_dssp ECCCEEECCCSS--CC-CC-TTEE---CHHHHTTCC-----CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred ECCCCCCCCCCC--CC-cc-CcEE---cHHHHhccc-----ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc
Confidence 999999987763 33 22 2444 444443321 147899999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCC----CcEEEcCEEEEccCCccChhhh--h-ccc
Q 013890 200 PRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKD----GRTLEADIVVVGVGGRPLISLF--K-GQV 272 (434)
Q Consensus 200 ~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~----g~~i~~d~vv~a~G~~p~~~~~--~-~~~ 272 (434)
+. +++++.+.+.+.+++.||++++++.+.+++.+++ ...+.+.+ |+++++|.|++|+|++|+++++ + .++
T Consensus 222 ~~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~--~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl 298 (482)
T 1ojt_A 222 QG-ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKED--GVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGV 298 (482)
T ss_dssp TT-SCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETT--EEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTC
T ss_pred cc-cCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCC--eEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCc
Confidence 86 7999999999999999999999999999987332 24566666 7789999999999999999873 3 356
Q ss_pred cc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEee
Q 013890 273 AE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRA 351 (434)
Q Consensus 273 ~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~ 351 (434)
.. .+|+|.||+++||+.|+|||+|||++.+ .++..|..||++||.||++... ...|..+|++.++.
T Consensus 299 ~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~---~~~~~~~p~~~~~~ 365 (482)
T 1ojt_A 299 AVTDRGFIEVDKQMRTNVPHIYAIGDIVGQP----------MLAHKAVHEGHVAAENCAGHKA---YFDARVIPGVAYTS 365 (482)
T ss_dssp CCCTTSCCCCCTTSBCSSTTEEECGGGTCSS----------CCHHHHHHHHHHHHHHHTTCCC---CCCCCCCCEEECSS
T ss_pred eeCCCCCEeeCCCcccCCCCEEEEEcccCCC----------ccHHHHHHHHHHHHHHHcCCCc---cCCCCCCCEEEEcC
Confidence 66 4588999999999999999999999754 4577899999999999997431 24567788877666
Q ss_pred cCcceEEeecCCC------cEEEEcCCC-----cc---ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcC
Q 013890 352 FDLSWQFYGDNVG------DTVLFGDND-----LA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQ 414 (434)
Q Consensus 352 ~~~~~~~~G~~~~------~~~~~~~~~-----~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~ 414 (434)
|+++. +|+++. ..+..+..+ .+ ....+|+|+++ ++|+|||+|++|+.+.|+ +.++.||+++
T Consensus 366 ~~~a~--vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 443 (482)
T 1ojt_A 366 PEVAW--VGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMG 443 (482)
T ss_dssp SCEEE--EECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred CCeEE--EeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 66554 477652 112222111 11 24568999988 689999999999998886 9999999999
Q ss_pred CCCCChhhhhccCCCcccc
Q 013890 415 PSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~ 433 (434)
+|++||..+.-+.+++++.
T Consensus 444 ~~~~~l~~~~~~~Pt~~e~ 462 (482)
T 1ojt_A 444 CDAADIGKTIHPHPTLGES 462 (482)
T ss_dssp CBHHHHHTSCCCSSSSTTH
T ss_pred CCHHHHhcCccCCCCHHHH
Confidence 9999999999999998874
No 29
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.5e-49 Score=392.05 Aligned_cols=397 Identities=21% Similarity=0.249 Sum_probs=290.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----------CCCccccccCCCC-----CCCCCCcce
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----------RPALSKAYLFPEG-----TARLPGFHV 68 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----------~~~~~~~~~~~~~-----~~~~~~~~~ 68 (434)
++|||+|||||++|++||..|+++|++ |+|||+++..... .|.+++.++.... ...+..+..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~ 78 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLK---TALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGI 78 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCC---EEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCE---EEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 469999999999999999999999987 9999998622100 0001110000000 000000100
Q ss_pred ecCCCC-----------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCC--cEEEeceEEEccCCCcccc
Q 013890 69 CVGSGG-----------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 69 ~~~~~~-----------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lilAtG~~~~~p 129 (434)
...... ......++++.+++++.+ .+..++.....+...++ ..+.||++|+|||++|..|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~ 157 (476)
T 3lad_A 79 STGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEG-HGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEI 157 (476)
T ss_dssp ECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-EEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCC
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCC
Confidence 000000 001123455679999998 44456655556666666 5799999999999999876
Q ss_pred cCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHH
Q 013890 130 TDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAA 209 (434)
Q Consensus 130 ~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~ 209 (434)
+. .+.+...+++..+.. .+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+
T Consensus 158 ~~---~~~~~~~v~~~~~~~---~~-----~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~ 225 (476)
T 3lad_A 158 PP---APVDQDVIVDSTGAL---DF-----QNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-VDEQVAK 225 (476)
T ss_dssp TT---SCCCSSSEEEHHHHT---SC-----SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHH
T ss_pred CC---CCCCcccEEechhhh---cc-----ccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-cCHHHHH
Confidence 64 333445666543221 11 125789999999999999999999999999999999999885 7999999
Q ss_pred HHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCC---cEEEcCEEEEccCCccChhhh---hccccc-cCCcEEeC
Q 013890 210 FYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDG---RTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETD 282 (434)
Q Consensus 210 ~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g---~~i~~d~vv~a~G~~p~~~~~---~~~~~~-~~g~i~vd 282 (434)
.+.+.+++.||++++++.+.+++.++++ ..+.+.++ +++++|.|++|+|++|+++.+ ..++.. .+|+|.||
T Consensus 226 ~l~~~l~~~Gv~v~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd 303 (476)
T 3lad_A 226 EAQKILTKQGLKILLGARVTGTEVKNKQ--VTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVD 303 (476)
T ss_dssp HHHHHHHHTTEEEEETCEEEEEEECSSC--EEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEEcCCE--EEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeC
Confidence 9999999999999999999999874333 34666544 679999999999999999753 345666 56889999
Q ss_pred CCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecC
Q 013890 283 DFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDN 362 (434)
Q Consensus 283 ~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~ 362 (434)
+++||++|+|||+|||++.+ ..+..|..||+.||+||++... ...+..+|++.++.|+++ .+|++
T Consensus 304 ~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~---~~~~~~~p~~~~~~~~~a--~vGlt 368 (476)
T 3lad_A 304 DYCATSVPGVYAIGDVVRGA----------MLAHKASEEGVVVAERIAGHKA---QMNYDLIPAVIYTHPEIA--GVGKT 368 (476)
T ss_dssp TTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHCCC---CCCTTCCCEEECSSSEEE--EEECC
T ss_pred CCcccCCCCEEEEEccCCCc----------ccHHHHHHHHHHHHHHhcCCCc---ccCCCCCCEEEECcCCEE--EeeCC
Confidence 99999999999999999654 4577899999999999997543 256778898776555555 44877
Q ss_pred CC------cEEEEcCCCc-----c---ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhc
Q 013890 363 VG------DTVLFGDNDL-----A---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKN 425 (434)
Q Consensus 363 ~~------~~~~~~~~~~-----~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~ 425 (434)
+. ..+..+..+. + ..+.+|+|+++ ++|+|||+|++|++++|+ +.++.||++++|++||..+.-
T Consensus 369 e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~ 448 (476)
T 3lad_A 369 EQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVF 448 (476)
T ss_dssp HHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSCC
T ss_pred HHHHHhcCCCEEEEEEeccccchheecCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCcc
Confidence 52 1222222211 1 24678999887 579999999999999887 999999999999999999999
Q ss_pred cCCCcccc
Q 013890 426 EGLSFASK 433 (434)
Q Consensus 426 ~~~~~~~~ 433 (434)
+.+++++.
T Consensus 449 ~hPt~~e~ 456 (476)
T 3lad_A 449 AHPALSEA 456 (476)
T ss_dssp CSSCSHHH
T ss_pred CCCChHHH
Confidence 99998764
No 30
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.3e-49 Score=387.18 Aligned_cols=398 Identities=20% Similarity=0.251 Sum_probs=293.8
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCCccccccCCC----CCCCCCCcceecCCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE----GTARLPGFHVCVGSG 73 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 73 (434)
|++.+|||+|||||++|+++|..|+++|++ |+|||++.... +..+.+++.++... .....+.+.......
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~---V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~ 77 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKK---VAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES 77 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCE---EEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 555579999999999999999999999987 99999953211 00011111110000 000001110000000
Q ss_pred -----------------CCCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEc-CCCcEEEeceEEEccCCCcc-cccCCCC
Q 013890 74 -----------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLS-ATGLIFKYQILVIATGSTVL-RLTDFGV 134 (434)
Q Consensus 74 -----------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~-~~~~~~~~d~lilAtG~~~~-~p~~~~i 134 (434)
....+..++.+.+++++.+ .+..++ .+++.+ .++..+.||++|+|||+.|. .|+ +
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~---i 151 (463)
T 4dna_A 78 RFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELAG--PNTVKLLASGKTVTAERIVIAVGGHPSPHDA---L 151 (463)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEESS--SSEEEETTTTEEEEEEEEEECCCEEECCCTT---S
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee--CCEEEEecCCeEEEeCEEEEecCCCcccCCC---C
Confidence 0011223455679999988 555543 467776 56788999999999999998 877 4
Q ss_pred CCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHH
Q 013890 135 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 214 (434)
Q Consensus 135 ~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (434)
+|.+ .+ .+..+...+ ...+++++|||+|++|+|+|..+.+.|.+|+++++.+.+++. +++++.+.+.+.
T Consensus 152 ~G~~--~~---~~~~~~~~~-----~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~-~~~~~~~~l~~~ 220 (463)
T 4dna_A 152 PGHE--LC---ITSNEAFDL-----PALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR-FDQDMRRGLHAA 220 (463)
T ss_dssp TTGG--GC---BCHHHHTTC-----SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHH
T ss_pred CCcc--cc---ccHHHHhhh-----hcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHH
Confidence 5543 12 233333222 124789999999999999999999999999999999988875 799999999999
Q ss_pred HHHcCcEEEcCCeEEEEEecCCCcEEEEE-eCCCcEEEcCEEEEccCCccChhhh---hccccc-cCCcEEeCCCCCCCC
Q 013890 215 YANKGIKIIKGTVAVGFTTNADGEVNEVK-LKDGRTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSA 289 (434)
Q Consensus 215 l~~~gV~~~~~~~v~~i~~~~~g~~~~v~-~~~g~~i~~d~vv~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~ 289 (434)
+++.||++++++.|.+++.++++. ..|. +++|+ +++|.||+|+|++|+++++ ..++.. ++|+|.||+++||++
T Consensus 221 l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~ 298 (463)
T 4dna_A 221 MEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTST 298 (463)
T ss_dssp HHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSS
T ss_pred HHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCC
Confidence 999999999999999998744443 4678 88887 9999999999999999863 346666 578899999999999
Q ss_pred CceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC-----
Q 013890 290 DDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG----- 364 (434)
Q Consensus 290 ~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~----- 364 (434)
|+|||+|||++.+ +++..|..||+.+|+||++.... ...+..+|+.+++.|+++.+ |+++.
T Consensus 299 ~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~p~~a~v--G~te~~a~~~ 364 (463)
T 4dna_A 299 PGIYALGDVTDRV----------QLTPVAIHEAMCFIETEYKNNPT--SPDHDLIATAVFSQPEIGTV--GITEEEAARK 364 (463)
T ss_dssp TTEEECSGGGSSC----------CCHHHHHHHHHHHHHHHHSSCCC--CCCCSCCCEEECSSSCEEEE--ECCHHHHHHH
T ss_pred CCEEEEEecCCCC----------CChHHHHHHHHHHHHHHcCCCCc--ccCCCCCCEEEECCCCeEEe--cCCHHHHHHc
Confidence 9999999999844 56788999999999999976432 25778889888776666555 77652
Q ss_pred -cEEEE-----cCCCcc---ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCCCccc
Q 013890 365 -DTVLF-----GDNDLA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 365 -~~~~~-----~~~~~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 432 (434)
..+.. ....++ ....+|+|+++ ++++|||+|++|++++|+ +.++.||++++|++||..+..+.++++|
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e 444 (463)
T 4dna_A 365 FQEIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAE 444 (463)
T ss_dssp SSEEEEEEEEECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGG
T ss_pred CCCeEEEEEeccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHH
Confidence 22222 111111 34678999888 479999999999999887 9999999999999999999999999988
Q ss_pred cC
Q 013890 433 KI 434 (434)
Q Consensus 433 ~~ 434 (434)
.+
T Consensus 445 ~~ 446 (463)
T 4dna_A 445 EL 446 (463)
T ss_dssp GG
T ss_pred HH
Confidence 64
No 31
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=1.3e-49 Score=391.39 Aligned_cols=397 Identities=18% Similarity=0.151 Sum_probs=288.7
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCCccccccCCC----CCCCCCCc---ceecC
Q 013890 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE----GTARLPGF---HVCVG 71 (434)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~---~~~~~ 71 (434)
|+.++||+|||||++|+++|..|++.|++ |+|||++.... +..+.+++.++... .....|.+ .....
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 77 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQ---VTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVP 77 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCC
Confidence 34569999999999999999999999876 99999984210 00000111100000 00000000 00000
Q ss_pred CCCC----------------CCCHhHHHHC-CcEEEcCCeEEEEeCCCCEEEcCCC--cEEEeceEEEccCCCcccccCC
Q 013890 72 SGGE----------------RLLPEWYKEK-GIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDF 132 (434)
Q Consensus 72 ~~~~----------------~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lilAtG~~~~~p~~~ 132 (434)
.... ....+++++. +++++.+ .+..++.....+...++ .++.||++|+|||++|+.|+.
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i- 155 (467)
T 1zk7_A 78 TIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPI- 155 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCC-
T ss_pred ccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCC-
Confidence 0000 0123455556 8999987 57777765556666677 679999999999999998884
Q ss_pred CCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHH
Q 013890 133 GVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYE 212 (434)
Q Consensus 133 ~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 212 (434)
+|.+...++ +..++..+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ +++++.+.+.
T Consensus 156 --~G~~~~~~~---~~~~~~~~-----~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~ 223 (467)
T 1zk7_A 156 --PGLKESPYW---TSTEALAS-----DTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAIGEAVT 223 (467)
T ss_dssp --TTTTTSCCB---CHHHHHHC-----SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHHHHHHH
T ss_pred --CCCCcCcee---cHHHHhcc-----cccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHHHHHHH
Confidence 554433443 33333322 12479999999999999999999999999999999999888 7999999999
Q ss_pred HHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhh---hccccc-cCCcEEeCCCCCCC
Q 013890 213 GYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTS 288 (434)
Q Consensus 213 ~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~ 288 (434)
+.+++.||++++++.|.+++. ++....+.++ +.++++|.||+|+|++|+++.+ ..++.. .+|+|.||+++||+
T Consensus 224 ~~l~~~Gv~i~~~~~v~~i~~--~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~ 300 (467)
T 1zk7_A 224 AAFRAEGIEVLEHTQASQVAH--MDGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTS 300 (467)
T ss_dssp HHHHHTTCEEETTCCEEEEEE--ETTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCS
T ss_pred HHHHhCCCEEEcCCEEEEEEE--eCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccC
Confidence 999999999999999999986 3333456666 4589999999999999998753 345665 46789999999999
Q ss_pred CCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC----
Q 013890 289 ADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG---- 364 (434)
Q Consensus 289 ~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~---- 364 (434)
.|+|||+|||+..+ ..+..|..||+.+|.||++... ...+..+|++.+..+++. .+|+++.
T Consensus 301 ~~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~---~~~~~~~p~~~~~~~~~a--~vG~~~~~a~~ 365 (467)
T 1zk7_A 301 NPNIYAAGDCTDQP----------QFVYVAAAAGTRAAINMTGGDA---ALDLTAMPAVVFTDPQVA--TVGYSEAEAHH 365 (467)
T ss_dssp STTEEECSTTBSSC----------CCHHHHHHHHHHHHHHHTTCCC---CCCCTTCEEEECSSSEEE--EEECCHHHHHH
T ss_pred CCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHHcCCCc---ccCCCCCCEEEecCCceE--EEecCHHHHHh
Confidence 99999999999865 3577899999999999987521 256677887666555544 4576642
Q ss_pred --cEEEEcCC-----Ccc---ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCCCcc
Q 013890 365 --DTVLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFA 431 (434)
Q Consensus 365 --~~~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 431 (434)
..+..... ... .+..+|+|++++ +|+|||++++|+.+.++ +.++.+|++++|++||..+.-+.++++
T Consensus 366 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~ 445 (467)
T 1zk7_A 366 DGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMV 445 (467)
T ss_dssp TTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTSTT
T ss_pred cCCCeEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHH
Confidence 11211111 111 235789998884 89999999999998886 999999999999999999988888887
Q ss_pred cc
Q 013890 432 SK 433 (434)
Q Consensus 432 ~~ 433 (434)
+.
T Consensus 446 e~ 447 (467)
T 1zk7_A 446 EG 447 (467)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 32
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.1e-48 Score=384.88 Aligned_cols=396 Identities=22% Similarity=0.286 Sum_probs=288.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCCccccccCCCCC-CC----CCCcceec-CC--
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEGT-AR----LPGFHVCV-GS-- 72 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~~-~~----~~~~~~~~-~~-- 72 (434)
++||+|||||+||++||..|++.|++ |+|||+++..+.. .+.+++.++..... .. +..+.... ..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMK---TACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVT 78 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 48999999999999999999999987 9999998643210 01111111100000 00 00000000 00
Q ss_pred -CC--------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCC--cEEEeceEEEccCCCcccccCCCCC
Q 013890 73 -GG--------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFGVE 135 (434)
Q Consensus 73 -~~--------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lilAtG~~~~~p~~~~i~ 135 (434)
.. .....+++++.+++++.++. ..++.....+...++ .++.||+||+|||++|..|+. +
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~-~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~---~ 154 (468)
T 2qae_A 79 MDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEG-SFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPF---L 154 (468)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEE-EEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTT---B
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEE-EEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCC---C
Confidence 00 00113455667999999854 446654445655666 689999999999999988874 5
Q ss_pred CCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHH
Q 013890 136 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYY 215 (434)
Q Consensus 136 g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (434)
+.+..+++ +..++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+
T Consensus 155 g~~~~~v~---t~~~~~~~~-----~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l 225 (468)
T 2qae_A 155 PFDEKVVL---SSTGALALP-----RVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-LDEDVTNALVGAL 225 (468)
T ss_dssp CCCSSSEE---CHHHHHTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHH
T ss_pred CCCcCcee---chHHHhhcc-----cCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-CCHHHHHHHHHHH
Confidence 54444555 344443321 15789999999999999999999999999999999999885 7999999999999
Q ss_pred -HHcCcEEEcCCeEEEEEecCCCcEEEEEeC--CC--cEEEcCEEEEccCCccChhh--hh-ccccc-cCCcEEeCCCCC
Q 013890 216 -ANKGIKIIKGTVAVGFTTNADGEVNEVKLK--DG--RTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETDDFFK 286 (434)
Q Consensus 216 -~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~--~g--~~i~~d~vv~a~G~~p~~~~--~~-~~~~~-~~g~i~vd~~~~ 286 (434)
++.||+++++++|.+++.++++ ..+.+. +| +++++|.||+|+|++|++++ ++ .++.. ++|+|.||+++|
T Consensus 226 ~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~ 303 (468)
T 2qae_A 226 AKNEKMKFMTSTKVVGGTNNGDS--VSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFE 303 (468)
T ss_dssp HHHTCCEEECSCEEEEEEECSSS--EEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSB
T ss_pred hhcCCcEEEeCCEEEEEEEcCCe--EEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcc
Confidence 9999999999999999874333 345554 66 67999999999999999986 33 35666 468899999999
Q ss_pred CCCCceEEeccccc-ccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC-
Q 013890 287 TSADDVYAVGDVAT-FPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG- 364 (434)
Q Consensus 287 t~~~~iya~Gd~~~-~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~- 364 (434)
|++|+|||+|||+. .+ ..+..|..||+.||.||.+... ...|..+|++.++.|+ +..+|+++.
T Consensus 304 t~~~~IyA~GD~~~~~~----------~~~~~A~~~g~~aa~~i~~~~~---~~~~~~~p~~~~~~~~--~a~vG~~e~~ 368 (468)
T 2qae_A 304 TSIPDVYAIGDVVDKGP----------MLAHKAEDEGVACAEILAGKPG---HVNYGVIPAVIYTMPE--VASVGKSEDE 368 (468)
T ss_dssp CSSTTEEECGGGBSSSC----------SCHHHHHHHHHHHHHHHTTCCC---CCCTTSCCEEECSSSE--EEEEECCHHH
T ss_pred cCCCCEEEeeccCCCCC----------ccHhHHHHHHHHHHHHHcCCCc---cCCCCCCCEEEECCCc--eEEEeCCHHH
Confidence 99999999999998 33 4677899999999999997431 2456678876665554 445577642
Q ss_pred -----cEEEEcCC-----Ccc---ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCC
Q 013890 365 -----DTVLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGL 428 (434)
Q Consensus 365 -----~~~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 428 (434)
..+..... .++ .+..+|+|++++ +|+|||++++|+.++++ +.++.+|++++|++||..+..+.+
T Consensus 369 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~P 448 (468)
T 2qae_A 369 LKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHP 448 (468)
T ss_dssp HHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSS
T ss_pred HHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCC
Confidence 11222111 111 245689998884 89999999999998886 999999999999999999988999
Q ss_pred Ccccc
Q 013890 429 SFASK 433 (434)
Q Consensus 429 ~~~~~ 433 (434)
+|++.
T Consensus 449 t~~e~ 453 (468)
T 2qae_A 449 TMSEA 453 (468)
T ss_dssp CTHHH
T ss_pred CHHHH
Confidence 98764
No 33
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.5e-48 Score=381.44 Aligned_cols=397 Identities=18% Similarity=0.190 Sum_probs=290.5
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCCccccccCCCC----CC-CCCCcceecCC--
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEG----TA-RLPGFHVCVGS-- 72 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~-- 72 (434)
++++||+|||||++|+++|..|++.|++ |+|||++.... ...|.+++.++.... .. ..+.+......
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~ 78 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQK---CALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINK 78 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEE
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCe---EEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCc
Confidence 4568999999999999999999999887 99999984311 000111111110000 00 00000000000
Q ss_pred -CC--------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCC
Q 013890 73 -GG--------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGA 137 (434)
Q Consensus 73 -~~--------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~ 137 (434)
.. ...+...+.+.+++++.+ .+..++. +++.+ +++++.||+||||||++|..|+ ++|.
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~~p~---i~g~ 151 (450)
T 1ges_A 79 FNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKG-FARFVDA--KTLEV-NGETITADHILIATGGRPSHPD---IPGV 151 (450)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CCEEEET--TEEEE-TTEEEEEEEEEECCCEEECCCC---STTG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecC--CEEEE-CCEEEEeCEEEECCCCCCCCCC---CCCc
Confidence 00 001123346679999998 4455653 56766 6778999999999999998887 4554
Q ss_pred CCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHH
Q 013890 138 DAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 217 (434)
Q Consensus 138 ~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (434)
+ .+ .+..++..+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++
T Consensus 152 ~--~~---~~~~~~~~~-----~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~ 220 (450)
T 1ges_A 152 E--YG---IDSDGFFAL-----PALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-FDPMISETLVEVMNA 220 (450)
T ss_dssp G--GS---BCHHHHHHC-----SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH
T ss_pred c--ce---ecHHHhhhh-----hhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-hhHHHHHHHHHHHHH
Confidence 2 12 234443332 124789999999999999999999999999999999988875 799999999999999
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhh--h-hccccc-cCCcEEeCCCCCCCCCceE
Q 013890 218 KGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISL--F-KGQVAE-NKGGIETDDFFKTSADDVY 293 (434)
Q Consensus 218 ~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~--~-~~~~~~-~~g~i~vd~~~~t~~~~iy 293 (434)
.||++++++.+.+++.++++. ..+.+++|+++++|.||+|+|++|+++. + ..++.. ++|+|.||+++||++|+||
T Consensus 221 ~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~Iy 299 (450)
T 1ges_A 221 EGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIY 299 (450)
T ss_dssp HSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEE
T ss_pred CCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEE
Confidence 999999999999998743333 4678889989999999999999999973 3 346666 4788999999999999999
Q ss_pred EecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCCc--------
Q 013890 294 AVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD-------- 365 (434)
Q Consensus 294 a~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~-------- 365 (434)
|+|||++.+ .++..|..||+.+|.||++.... ....|..+|+.+++.+++..+ |+++.+
T Consensus 300 A~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~-~~~~~~~~p~~~~~~~~~a~v--G~~e~~a~~~~g~~ 366 (450)
T 1ges_A 300 AVGDNTGAV----------ELTPVAVAAGRRLSERLFNNKPD-EHLDYSNIPTVVFSHPPIGTV--GLTEPQAREQYGDD 366 (450)
T ss_dssp ECSGGGTSC----------CCHHHHHHHHHHHHHHHHTTCTT-CCCCCSSCCEEECCSSCEEEE--ECCHHHHHHHHCGG
T ss_pred EEeccCCCC----------ccHHHHHHHHHHHHHHHcCCCCc-ccCCCCCCCeEEECCCceEEE--eCCHHHHHhcCCCC
Confidence 999998743 46778999999999999974321 114677889887776766655 655311
Q ss_pred EEEEcCC-----Cc---cccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCCCccccC
Q 013890 366 TVLFGDN-----DL---ASATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFASKI 434 (434)
Q Consensus 366 ~~~~~~~-----~~---~~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 434 (434)
.+..... .. .....+|+|+++ ++++|||+|++|++++++ +.++.||++++|++||..+..+.++++|.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~ 446 (450)
T 1ges_A 367 QVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEF 446 (450)
T ss_dssp GEEEEEEEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGG
T ss_pred cEEEEEEECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHHHH
Confidence 1111111 11 123567889887 489999999999999886 999999999999999999999999998864
No 34
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.4e-48 Score=386.91 Aligned_cols=396 Identities=19% Similarity=0.188 Sum_probs=293.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc---CCCCCcEEEEeCCCCCCC----CCCCccccccCC---------CCCCCCCCcce
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQ---GVKPGELAIISKEAVAPY----ERPALSKAYLFP---------EGTARLPGFHV 68 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~---g~~~~~V~vie~~~~~~~----~~~~~~~~~~~~---------~~~~~~~~~~~ 68 (434)
++||+|||||++|+++|.+|+++ |++ |+|||+++. +. ..+.+++.++.. .....++.+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~---V~liE~~~~-GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~ 77 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQ---VTVIDCDGI-GGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFD 77 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEE---EEEEESSCT-THHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCE---EEEEeCCCc-CCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 48999999999999999999998 776 999999862 11 001112211110 00001110000
Q ss_pred ecCCCC--------------CCCCHhHHHHCCcEEEcCCeEEEEeCC----CC--EEEcCCCc--EEEeceEEEccCCCc
Q 013890 69 CVGSGG--------------ERLLPEWYKEKGIELILSTEIVRADIA----SK--TLLSATGL--IFKYQILVIATGSTV 126 (434)
Q Consensus 69 ~~~~~~--------------~~~~~~~~~~~~v~~~~~~~v~~i~~~----~~--~v~~~~~~--~~~~d~lilAtG~~~ 126 (434)
...... .....+++++.+++++.+ .+..++.. .+ .+...++. .+.||++|+|||+.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 78 DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAG-RGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp --CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 000000 001245566789999998 47777762 23 34445665 799999999999999
Q ss_pred ccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHH
Q 013890 127 LRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTAD 206 (434)
Q Consensus 127 ~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~ 206 (434)
..|+. ++.+..++++..+..+.. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. ++++
T Consensus 157 ~~p~i---~g~~~~~v~~~~~~~~~~--------~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~ 224 (499)
T 1xdi_A 157 RILPS---AQPDGERILTWRQLYDLD--------ALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-EDAD 224 (499)
T ss_dssp CCCGG---GCCCSSSEEEGGGGGGCS--------SCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-SSHH
T ss_pred CCCCC---CCCCcCcEEehhHhhhhh--------ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHH
Confidence 88874 555545677655443211 14789999999999999999999999999999999999987 8999
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhh--hh-ccccc-cCCcEEeC
Q 013890 207 IAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETD 282 (434)
Q Consensus 207 ~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~--~~-~~~~~-~~g~i~vd 282 (434)
+.+.+.+.+++.||++++++.|++++.+++ . ..+.+.+|+++++|.||+|+|++|++++ ++ .++.. .+|+|.||
T Consensus 225 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~-v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd 302 (499)
T 1xdi_A 225 AALVLEESFAERGVRLFKNARAASVTRTGA-G-VLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVD 302 (499)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEECSS-S-EEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-E-EEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEEC
Confidence 999999999999999999999999987333 3 3677888889999999999999999987 43 35666 45889999
Q ss_pred CCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecC
Q 013890 283 DFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDN 362 (434)
Q Consensus 283 ~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~ 362 (434)
+++||++|+|||+|||++.+ ..+..|..||++||.||++.... ...|..+|+++++.+++ ..+|++
T Consensus 303 ~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~~~~--a~vG~~ 368 (499)
T 1xdi_A 303 RVSRTLATGIYAAGDCTGLL----------PLASVAAMQGRIAMYHALGEGVS--PIRLRTVAATVFTRPEI--AAVGVP 368 (499)
T ss_dssp SSSBCSSTTEEECSGGGTSC----------SCHHHHHHHHHHHHHHHTTCCCC--CCCGGGCEEEECSSSEE--EEEESC
T ss_pred CCcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCCCc--cCCCCCCcEEEEecCCc--eEeCCC
Confidence 99999999999999999754 45678999999999999975211 24577788877655554 455876
Q ss_pred CCc------EEEEcC-----CCcc---ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhc
Q 013890 363 VGD------TVLFGD-----NDLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKN 425 (434)
Q Consensus 363 ~~~------~~~~~~-----~~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~ 425 (434)
+.+ .+.... ..+. .+..+|+|++++ +|+|||++++|+.++++ +.++.||++++|++||..+..
T Consensus 369 e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~ 448 (499)
T 1xdi_A 369 QSVIDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLA 448 (499)
T ss_dssp HHHHHHTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSBC
T ss_pred HHHHHhCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhcccc
Confidence 521 122111 1111 245789998884 79999999999999886 999999999999999999998
Q ss_pred cCCCcccc
Q 013890 426 EGLSFASK 433 (434)
Q Consensus 426 ~~~~~~~~ 433 (434)
+.++|++.
T Consensus 449 ~~Pt~~e~ 456 (499)
T 1xdi_A 449 VYPSLSGS 456 (499)
T ss_dssp CSSSTHHH
T ss_pred cCCCchHH
Confidence 99998763
No 35
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1.7e-48 Score=384.91 Aligned_cols=395 Identities=21% Similarity=0.252 Sum_probs=290.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCCccccccCCCC----CCCCCCcceecCC----
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEG----TARLPGFHVCVGS---- 72 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---- 72 (434)
.+|||+|||||++|++||+.|+++|++ |+|||++.... +..+.+++.++.... ....+.+......
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 101 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKR---VAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFN 101 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCE---EEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccC
Confidence 468999999999999999999999987 99999954211 000111111100000 0000000000000
Q ss_pred -------------CCCCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcC-CCcEEEeceEEEccCCCcc-cccCCCCCCC
Q 013890 73 -------------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSA-TGLIFKYQILVIATGSTVL-RLTDFGVEGA 137 (434)
Q Consensus 73 -------------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~-~~~~~~~d~lilAtG~~~~-~p~~~~i~g~ 137 (434)
.........+.+.+++++.+ .+..++ .+.+.+. ++..+.||++|+|||+.|. .|+. +|.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~--~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i---~G~ 175 (484)
T 3o0h_A 102 WEKLVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVD--EHTLELSVTGERISAEKILIATGAKIVSNSAI---KGS 175 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--TTEEEETTTCCEEEEEEEEECCCEEECCC--C---BTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEee--CCEEEEecCCeEEEeCEEEEccCCCcccCCCC---CCc
Confidence 00011234455679999998 566665 4566665 7788999999999999998 7774 553
Q ss_pred CCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHH
Q 013890 138 DAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 217 (434)
Q Consensus 138 ~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (434)
+ .+++..+..... ..+++++|||+|++|+|+|..+.+.|.+|+++++.+.+++. +++++.+.+.+.+++
T Consensus 176 ~--~~~~~~~~~~~~--------~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~ 244 (484)
T 3o0h_A 176 D--LCLTSNEIFDLE--------KLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-FDYDLRQLLNDAMVA 244 (484)
T ss_dssp G--GSBCTTTGGGCS--------SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH
T ss_pred c--ccccHHHHHhHH--------hcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-cCHHHHHHHHHHHHH
Confidence 2 122222222111 14789999999999999999999999999999999988886 799999999999999
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhh---hccccc-cCCcEEeCCCCCCCCCceE
Q 013890 218 KGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDVY 293 (434)
Q Consensus 218 ~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~iy 293 (434)
.||++++++.|.+++.++ +. ..+.+.+|+++++|.||+|+|++|++.++ ..++.. ++|+|.||+++||++|+||
T Consensus 245 ~Gv~i~~~~~V~~i~~~~-~~-v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iy 322 (484)
T 3o0h_A 245 KGISIIYEATVSQVQSTE-NC-YNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIW 322 (484)
T ss_dssp HTCEEESSCCEEEEEECS-SS-EEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEE
T ss_pred CCCEEEeCCEEEEEEeeC-CE-EEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEE
Confidence 999999999999998743 33 47888999999999999999999999853 346666 5688999999999999999
Q ss_pred EecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC------cEE
Q 013890 294 AVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG------DTV 367 (434)
Q Consensus 294 a~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~------~~~ 367 (434)
|+|||++.+ ..+..|..||+.+|+||++.... ...+..+|+.+++.|+++.+ |+++. ..+
T Consensus 323 a~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~--~~~~~~~p~~~~~~p~~a~v--Glte~~a~~~g~~~ 388 (484)
T 3o0h_A 323 AVGDVTGHI----------QLTPVAIHDAMCFVKNAFENTST--TPDYDLITTAVFSQPEIGTV--GLSEEDALHRYKRV 388 (484)
T ss_dssp ECGGGGTSC----------CCHHHHHHHHHHHHHHHHC---C--CCCCTTCCEEECCSSCEEEE--ECCHHHHHHHCSEE
T ss_pred EEEecCCCC----------cCHHHHHHHHHHHHHHHcCCCCC--cCCCCCCcEEEECCCCEEEe--eCCHHHHHHcCCCE
Confidence 999999744 56778999999999999976432 25778899888776766555 77652 222
Q ss_pred EEcCCCcc--------ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCCCccccC
Q 013890 368 LFGDNDLA--------SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFASKI 434 (434)
Q Consensus 368 ~~~~~~~~--------~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 434 (434)
..+..+.. ....+++|+++ ++++|||+|++|++++++ +.++.||++++|++||..+.-+.++++|.+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~ 466 (484)
T 3o0h_A 389 EIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEEL 466 (484)
T ss_dssp EEEEEEECCHHHHHHTCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGG
T ss_pred EEEEecCCcchhhccCCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHH
Confidence 22111111 24678999888 579999999999999887 999999999999999999999999998864
No 36
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=1.7e-48 Score=383.17 Aligned_cols=396 Identities=20% Similarity=0.221 Sum_probs=285.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC---CCCCccccccCCCC----CC-CCCCcceecCC--CC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY---ERPALSKAYLFPEG----TA-RLPGFHVCVGS--GG 74 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~---~~~~~~~~~~~~~~----~~-~~~~~~~~~~~--~~ 74 (434)
++||+|||||+||+++|..|++.|++ |+|||++..... ..+.+++.++.... .. ....+...... ..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~---V~liE~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLS---TAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCH
Confidence 58999999999999999999999987 999999832100 00111111110000 00 00000000000 00
Q ss_pred --------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCC--cEEEeceEEEccCCCcccccCCCCCCCC
Q 013890 75 --------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFGVEGAD 138 (434)
Q Consensus 75 --------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lilAtG~~~~~p~~~~i~g~~ 138 (434)
.....+++++.+++++.++.+. ++.....+...++ .++.||++|+|||+.|..|+. ++.+
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~---~g~~ 155 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-ADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPG---TSLS 155 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-SSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTT---CCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCC---CCCC
Confidence 0012345567899999886543 4333234555566 689999999999999988874 4433
Q ss_pred CCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHc
Q 013890 139 AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANK 218 (434)
Q Consensus 139 ~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (434)
.. ++ +..++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.
T Consensus 156 ~~-~~---~~~~~~~~~-----~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~ 225 (464)
T 2a8x_A 156 AN-VV---TYEEQILSR-----ELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-EDADVSKEIEKQFKKL 225 (464)
T ss_dssp TT-EE---CHHHHHTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHH
T ss_pred ce-EE---ecHHHhhcc-----ccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHc
Confidence 22 33 444443321 14789999999999999999999999999999999999885 8999999999999999
Q ss_pred CcEEEcCCeEEEEEecCCCcEEEEEeC-CC--cEEEcCEEEEccCCccChhh--hh-ccccc-cCCcEEeCCCCCCCCCc
Q 013890 219 GIKIIKGTVAVGFTTNADGEVNEVKLK-DG--RTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETDDFFKTSADD 291 (434)
Q Consensus 219 gV~~~~~~~v~~i~~~~~g~~~~v~~~-~g--~~i~~d~vv~a~G~~p~~~~--~~-~~~~~-~~g~i~vd~~~~t~~~~ 291 (434)
||++++++.+.+++.++++ ..+.+. +| +++++|.|++|+|++|++++ ++ .++.. .+|+|.||+++||+.|+
T Consensus 226 gv~i~~~~~v~~i~~~~~~--~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~ 303 (464)
T 2a8x_A 226 GVTILTATKVESIADGGSQ--VTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGH 303 (464)
T ss_dssp TCEEECSCEEEEEEECSSC--EEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTT
T ss_pred CCEEEeCcEEEEEEEcCCe--EEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCC
Confidence 9999999999999873333 345554 56 67999999999999999986 33 35666 46889999999999999
Q ss_pred eEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcc-cCCCCCCeeEEeecCcceEEeecCCC------
Q 013890 292 VYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTV-TGYDYLPYFYSRAFDLSWQFYGDNVG------ 364 (434)
Q Consensus 292 iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~G~~~~------ 364 (434)
|||+|||++.+ ..+..|..||+.||.||++... .. ..|..+|++.+..|++ ..+|+++.
T Consensus 304 IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~--~~~~~~~~~p~~~~~~~~~--a~vG~~e~~a~~~g 369 (464)
T 2a8x_A 304 IYAIGDVNGLL----------QLAHVAEAQGVVAAETIAGAET--LTLGDHRMLPRATFCQPNV--ASFGLTEQQARNEG 369 (464)
T ss_dssp EEECGGGGCSS----------CSHHHHHHHHHHHHHHHHTCCC--CCCCCGGGSCEEECSSSEE--EEEECCHHHHHHTT
T ss_pred EEEeECcCCCc----------cCHHHHHHHHHHHHHHhcCCCC--cccCCCCCCCEEEECCCCe--EEEcCCHHHHHhcC
Confidence 99999999754 4577899999999999997321 12 3467788776655554 45576642
Q ss_pred cEEEEcCC-----Ccc---ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCCCcccc
Q 013890 365 DTVLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 365 ~~~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 433 (434)
..+..... .++ .+..+|+|++++ +|+|||+|++|+.++++ +.++.+|++++|++||..+..+.++|++.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~ 449 (464)
T 2a8x_A 370 YDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSEA 449 (464)
T ss_dssp CCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTTHH
T ss_pred CCEEEEEEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChHHH
Confidence 11222111 111 245789998884 89999999999998885 99999999999999999988999998764
No 37
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=4.1e-49 Score=389.18 Aligned_cols=396 Identities=20% Similarity=0.265 Sum_probs=288.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHH-cCCCCCcEEEEeC--------CCCCCCC----CCCccccccCCCCC----CCCCCc
Q 013890 4 KSFKYVILGGGVSAGYAAREFAK-QGVKPGELAIISK--------EAVAPYE----RPALSKAYLFPEGT----ARLPGF 66 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~~~~V~vie~--------~~~~~~~----~~~~~~~~~~~~~~----~~~~~~ 66 (434)
.+|||+|||||++|++||..|++ .|++ |+|||+ ....+.. .|.+++.++..... ...+.+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~---V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~ 78 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKR---VAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGF 78 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCC---EEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCE---EEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhc
Confidence 35899999999999999999999 9987 999992 2211100 01111111100000 000001
Q ss_pred ceecCC-----CC--------------CCCCHhHHHHC-CcEEEcCCeEEEEeCCCCEEEcC-----CC---cEEEeceE
Q 013890 67 HVCVGS-----GG--------------ERLLPEWYKEK-GIELILSTEIVRADIASKTLLSA-----TG---LIFKYQIL 118 (434)
Q Consensus 67 ~~~~~~-----~~--------------~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~-----~~---~~~~~d~l 118 (434)
...... .. .......+++. +++++.+ .+..++. +++.+. ++ ..+.||+|
T Consensus 79 g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~g~~~~~~~~d~l 155 (490)
T 1fec_A 79 GWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQG-FGALQDN--HTVLVRESADPNSAVLETLDTEYI 155 (490)
T ss_dssp TEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEEE
T ss_pred CcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEe-EEEEeeC--CEEEEEeeccCCCCceEEEEcCEE
Confidence 000000 00 00112234566 9999998 5666764 455552 56 68999999
Q ss_pred EEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHC---CCeEEEEeeC
Q 013890 119 VIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKIN---NIDVSMVYPE 195 (434)
Q Consensus 119 ilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~---g~~v~~~~~~ 195 (434)
|||||++|..|+ ++|.+ .++ +..++..+ ...+++++|||+|++|+|+|..|.++ |.+|+++++.
T Consensus 156 viAtGs~p~~p~---i~g~~--~~~---~~~~~~~~-----~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~ 222 (490)
T 1fec_A 156 LLATGSWPQHLG---IEGDD--LCI---TSNEAFYL-----DEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRG 222 (490)
T ss_dssp EECCCEEECCCC---SBTGG--GCB---CHHHHTTC-----SSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred EEeCCCCCCCCC---CCCcc--cee---cHHHHhhh-----hhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcC
Confidence 999999998887 45542 222 33333322 12478999999999999999999999 9999999999
Q ss_pred CccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhh--h-hccc
Q 013890 196 PWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISL--F-KGQV 272 (434)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~--~-~~~~ 272 (434)
+++++. +++++.+.+.+.+++.||++++++.|.+++.++++. ..+.+++|+++++|.||+|+|++|+++. + ..++
T Consensus 223 ~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl 300 (490)
T 1fec_A 223 DMILRG-FDSELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGV 300 (490)
T ss_dssp SSSSTT-SCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTC
T ss_pred CCcccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCcEEEcCEEEEccCCCcCccccCchhcCc
Confidence 998886 799999999999999999999999999998743333 4688889989999999999999999973 3 3456
Q ss_pred cc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEee
Q 013890 273 AE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRA 351 (434)
Q Consensus 273 ~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~ 351 (434)
.. ++|+|.||+++||++|+|||+|||++.+ .++..|..||+.||.||++.... ...|..+|+..++.
T Consensus 301 ~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~ 368 (490)
T 1fec_A 301 EVAKNGAIKVDAYSKTNVDNIYAIGDVTDRV----------MLTPVAINEGAAFVDTVFANKPR--ATDHTKVACAVFSI 368 (490)
T ss_dssp CBCTTSCBCCCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHHHHHHHHHHSSCCC--CCCCSSCCEEECCS
T ss_pred cCCCCCCEEECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHHHHHHHHhcCCCCC--cCCCCCccEEEECC
Confidence 66 4788999999999999999999999643 56888999999999999975322 25677788777665
Q ss_pred cCcceEEeecCCCc------EEEEcCCCc--------cccCCcEE-EEEEe--CCEEEEEEEecCChHHH-HHHHHHHHc
Q 013890 352 FDLSWQFYGDNVGD------TVLFGDNDL--------ASATHKFG-TYWIK--DGKVVGVFLESGTPEEN-KAIAKVARV 413 (434)
Q Consensus 352 ~~~~~~~~G~~~~~------~~~~~~~~~--------~~~~~~~~-~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~ 413 (434)
++++ .+|+++.+ .+.....+. .....+|+ |++++ +|+|||+|++|++++++ +.++.||++
T Consensus 369 ~~~a--~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~ 446 (490)
T 1fec_A 369 PPMG--VCGYVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKM 446 (490)
T ss_dssp SCEE--EEECCHHHHHHHCSEEEEEEEEECCHHHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHT
T ss_pred CCeE--EEeCCHHHHHhcCCCEEEEEeecChhhhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHc
Confidence 6555 44766421 121111110 12467899 98884 89999999999999886 999999999
Q ss_pred CCCCCChhhhhccCCCccccC
Q 013890 414 QPSVESLDVLKNEGLSFASKI 434 (434)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~ 434 (434)
++|++||..+..+.+++++.+
T Consensus 447 ~~t~~~l~~~~~~hPt~~e~~ 467 (490)
T 1fec_A 447 GAKISDFYNTIGVHPTSAEEL 467 (490)
T ss_dssp TCBHHHHHTSCCCSSCSGGGG
T ss_pred CCCHHHHhccccCCCCHHHHH
Confidence 999999999999999998753
No 38
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.1e-48 Score=386.09 Aligned_cols=401 Identities=21% Similarity=0.272 Sum_probs=286.0
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCCccccccCCCC-----CCCCCCcceec-C
Q 013890 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG-----TARLPGFHVCV-G 71 (434)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~~~-~ 71 (434)
|++++||+|||||++|+++|..|+++|++ |+|||+++..+.. .+.+++.++.... ...+..+.... .
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~---V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~ 78 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFN---TACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNG 78 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 45569999999999999999999999987 9999996543210 0111111110000 00000000000 0
Q ss_pred C---CCC--------------CCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCC--cE------EEeceEEEccCCCc
Q 013890 72 S---GGE--------------RLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LI------FKYQILVIATGSTV 126 (434)
Q Consensus 72 ~---~~~--------------~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~------~~~d~lilAtG~~~ 126 (434)
. ... ....+++++.+++++.++.+. .+.....|.+.++ .+ +.||+||+|||++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 79 DIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF-EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 0 000 012345567899999986554 2222223444555 56 99999999999988
Q ss_pred ccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHH
Q 013890 127 LRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTAD 206 (434)
Q Consensus 127 ~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~ 206 (434)
..++ +++ .....++ +..++..+. . .+++++|||+|++|+|+|..|++.|.+|+++++.+++++. ++++
T Consensus 158 ~~~~--g~~-~~~~~v~---~~~~~~~~~----~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~ 225 (478)
T 1v59_A 158 TPFP--GIE-IDEEKIV---SSTGALSLK----E-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-MDGE 225 (478)
T ss_dssp CCCT--TCC-CCSSSEE---CHHHHTTCS----S-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-SCHH
T ss_pred CCCC--CCC-CCCceEE---cHHHHHhhh----c-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-cCHH
Confidence 4322 222 1112343 444443321 1 4789999999999999999999999999999999999884 8999
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeC-----CCcEEEcCEEEEccCCccChh--hhh-ccccc-cCC
Q 013890 207 IAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLK-----DGRTLEADIVVVGVGGRPLIS--LFK-GQVAE-NKG 277 (434)
Q Consensus 207 ~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~-----~g~~i~~d~vv~a~G~~p~~~--~~~-~~~~~-~~g 277 (434)
+.+.+.+.+++.||++++++.++++...+++....+.+. +++++++|.||+|+|++|+++ +++ .++.. .+|
T Consensus 226 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G 305 (478)
T 1v59_A 226 VAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRG 305 (478)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTS
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCC
Confidence 999999999999999999999999986213333456654 456899999999999999997 443 35666 478
Q ss_pred cEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceE
Q 013890 278 GIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQ 357 (434)
Q Consensus 278 ~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 357 (434)
+|.||+++||+.|+|||+|||+..+ ..+..|..||+.||.||++... ...|..+|++++..|+++.+
T Consensus 306 ~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~---~~~~~~~p~~~~~~~~~a~v 372 (478)
T 1v59_A 306 RLVIDDQFNSKFPHIKVVGDVTFGP----------MLAHKAEEEGIAAVEMLKTGHG---HVNYNNIPSVMYSHPEVAWV 372 (478)
T ss_dssp CBCCCTTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHSCC---CCCTTSCCEEECSSSEEEEE
T ss_pred CEeECcCCccCCCCEEEeeccCCCc----------ccHHHHHHHHHHHHHHHcCCCC---CCCCCCCCEEEEcCCcEEEE
Confidence 8999999999999999999999854 4577899999999999997432 25678889888877766554
Q ss_pred EeecCCC------cEEEEcCCC-----cc---ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCCh
Q 013890 358 FYGDNVG------DTVLFGDND-----LA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESL 420 (434)
Q Consensus 358 ~~G~~~~------~~~~~~~~~-----~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~ 420 (434)
|+++. ..+.....+ +. .+..+++|++++ +|+|||++++|+.+.++ +.++.+|++++|++|+
T Consensus 373 --G~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l 450 (478)
T 1v59_A 373 --GKTEEQLKEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDV 450 (478)
T ss_dssp --ECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHH
T ss_pred --ECCHHHHHHcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHH
Confidence 76642 112221111 11 235678998874 89999999999998785 9999999999999999
Q ss_pred hhhhccCCCcccc
Q 013890 421 DVLKNEGLSFASK 433 (434)
Q Consensus 421 ~~~~~~~~~~~~~ 433 (434)
..+..+.++|++.
T Consensus 451 ~~~~~~~Pt~~e~ 463 (478)
T 1v59_A 451 ARVCHAHPTLSEA 463 (478)
T ss_dssp HTSCCCTTCTTHH
T ss_pred hhCCCCCCCHHHH
Confidence 9999999998764
No 39
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.2e-48 Score=379.49 Aligned_cols=395 Identities=20% Similarity=0.267 Sum_probs=286.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCCccccccCCC----CCCCCCCcceecCCCC---
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE----GTARLPGFHVCVGSGG--- 74 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--- 74 (434)
++||+|||||+||+++|..|++.|++ |+|||++...+ ...+.+++.++... ...++..+........
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQK---VTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 58999999999999999999999987 99999983210 00011111111000 0000000000000000
Q ss_pred --------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCC-cEEEeceEEEccCCCcccccCCCCCCCCC
Q 013890 75 --------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG-LIFKYQILVIATGSTVLRLTDFGVEGADA 139 (434)
Q Consensus 75 --------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~-~~~~~d~lilAtG~~~~~p~~~~i~g~~~ 139 (434)
.....+++++.+++++.++.+ .++.....+...++ .++.||+||+|||++|..|+. ++.+.
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~---~g~~~ 155 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAY-FVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPN---FKFSN 155 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEE-EEETTEEEEEETTEEEEEECSEEEECCCEEECCBTT---BCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-EccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCC---CCccc
Confidence 001134556679999998654 46654445555566 679999999999999988874 44432
Q ss_pred CCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcC
Q 013890 140 KNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKG 219 (434)
Q Consensus 140 ~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 219 (434)
.++ +..++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.|
T Consensus 156 -~v~---~~~~~~~~~-----~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~g 225 (455)
T 1ebd_A 156 -RIL---DSTGALNLG-----EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-FEKQMAAIIKKRLKKKG 225 (455)
T ss_dssp -SEE---CHHHHHTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTT
T ss_pred -eEe---cHHHHhccc-----cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-cCHHHHHHHHHHHHHCC
Confidence 233 444433321 14789999999999999999999999999999999998886 79999999999999999
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeC---CCcEEEcCEEEEccCCccChhh--hh-ccccc-cCCcEEeCCCCCCCCCce
Q 013890 220 IKIIKGTVAVGFTTNADGEVNEVKLK---DGRTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETDDFFKTSADDV 292 (434)
Q Consensus 220 V~~~~~~~v~~i~~~~~g~~~~v~~~---~g~~i~~d~vv~a~G~~p~~~~--~~-~~~~~-~~g~i~vd~~~~t~~~~i 292 (434)
|++++++.|.+++.++++ ..+.+. +++++++|.|++|+|++|++++ ++ .++.. .+|+|.||+++||++|+|
T Consensus 226 v~i~~~~~v~~i~~~~~~--~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~I 303 (455)
T 1ebd_A 226 VEVVTNALAKGAEEREDG--VTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNI 303 (455)
T ss_dssp CEEEESEEEEEEEEETTE--EEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTE
T ss_pred CEEEeCCEEEEEEEeCCe--EEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCE
Confidence 999999999999863322 345543 4568999999999999999986 33 35665 468899999999999999
Q ss_pred EEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC------cE
Q 013890 293 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG------DT 366 (434)
Q Consensus 293 ya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~------~~ 366 (434)
||+|||+..+ ..+..|..||+.||.||.+... ...|..+|++.+..|+++ .+|+++. ..
T Consensus 304 ya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~---~~~~~~~p~~~~~~~~~a--~vG~~e~~a~~~g~~ 368 (455)
T 1ebd_A 304 FAIGDIVPGP----------ALAHKASYEGKVAAEAIAGHPS---AVDYVAIPAVVFSDPECA--SVGYFEQQAKDEGID 368 (455)
T ss_dssp EECGGGSSSC----------CCHHHHHHHHHHHHHHHTSCCC---CCCCSCCCEEECSSSCEE--EEECCHHHHHTTTCC
T ss_pred EEEeccCCCc----------ccHHHHHHHHHHHHHHHcCCCc---cCCCCCCCEEEECCCceE--EEeCCHHHHHhcCCC
Confidence 9999999754 4577899999999999997421 245667787766555555 5576542 11
Q ss_pred EEEcCCC-----cc---ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCCCcccc
Q 013890 367 VLFGDND-----LA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 367 ~~~~~~~-----~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 433 (434)
+.....+ ++ .+..+|+|++++ +|+|||+|++|+.++|+ +.++.||++++|++||..+.-+.++|++.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~ 446 (455)
T 1ebd_A 369 VIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEI 446 (455)
T ss_dssp EEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTHH
T ss_pred EEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHH
Confidence 2221111 11 245689998884 89999999999998886 99999999999999999999999998864
No 40
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=5.8e-48 Score=378.85 Aligned_cols=392 Identities=22% Similarity=0.272 Sum_probs=285.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCCccccccCCCCC----CCCCCccee--cCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEGT----ARLPGFHVC--VGSGGE 75 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~ 75 (434)
++||+|||||+||++||..|++.|++ |+|||+++..+ +..+.+++.++..... .....+... ......
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~---V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLK---VLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 58999999999999999999999886 99999986210 0011112211110000 000000000 000000
Q ss_pred --------------CCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCC
Q 013890 76 --------------RLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKN 141 (434)
Q Consensus 76 --------------~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~ 141 (434)
.....++++.+++++.++.+ .++ .+++.+. ++++.||+||||||++|..|+ ++++. ..
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~~--~~~v~v~-g~~~~~d~lViATGs~p~~p~--gi~~~--~~ 154 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFAR-LVG--PKEVEVG-GERYGAKSLILATGSEPLELK--GFPFG--ED 154 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEE-EEE--TTEEEET-TEEEEEEEEEECCCEEECCBT--TBCCS--SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEE-Ecc--CCEEEEc-cEEEEeCEEEEcCCCCCCCCC--CCCCC--Cc
Confidence 00234556789999998544 354 4677665 678999999999999998776 35552 24
Q ss_pred EEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcE
Q 013890 142 IFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIK 221 (434)
Q Consensus 142 v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~ 221 (434)
++ +..++..+ ....+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.+++.||+
T Consensus 155 v~---~~~~~~~l----~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gV~ 226 (464)
T 2eq6_A 155 VW---DSTRALKV----EEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-GDPETAALLRRALEKEGIR 226 (464)
T ss_dssp EE---CHHHHTCG----GGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCE
T ss_pred EE---cHHHHHhh----hhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHhcCCE
Confidence 44 44444332 2224789999999999999999999999999999999998885 7999999999999999999
Q ss_pred EEcCCeEEEEEecCCCcEEEEEeC-C--Cc--EEEcCEEEEccCCccChhhh---hccccc-cCCcEEeCCCCCCCCCce
Q 013890 222 IIKGTVAVGFTTNADGEVNEVKLK-D--GR--TLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDV 292 (434)
Q Consensus 222 ~~~~~~v~~i~~~~~g~~~~v~~~-~--g~--~i~~d~vv~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~i 292 (434)
+++++.+.+++.++ +. ..+.+. + |+ ++++|.|++|+|++|+++++ ..++.. ++|+|.||+++||+.|+|
T Consensus 227 i~~~~~v~~i~~~~-~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~I 304 (464)
T 2eq6_A 227 VRTKTKAVGYEKKK-DG-LHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGV 304 (464)
T ss_dssp EECSEEEEEEEEET-TE-EEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTE
T ss_pred EEcCCEEEEEEEeC-CE-EEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCE
Confidence 99999999998732 22 356665 6 76 89999999999999999853 345666 568899999999999999
Q ss_pred EEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC------cE
Q 013890 293 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG------DT 366 (434)
Q Consensus 293 ya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~------~~ 366 (434)
||+|||++.+ ..+..|..||+.||.||++... ...+. +|++.+..+++ ..+|+++. ..
T Consensus 305 ya~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~---~~~~~-~p~~~~~~~~~--a~vG~~e~~a~~~g~~ 368 (464)
T 2eq6_A 305 YAIGDAARPP----------LLAHKAMREGLIAAENAAGKDS---AFDYQ-VPSVVYTSPEW--AGVGLTEEEAKRAGYK 368 (464)
T ss_dssp EECGGGTCSS----------CCHHHHHHHHHHHHHHHTTCCC---CCCCC-CCEEECSSSEE--EEEECCHHHHHHTTCC
T ss_pred EEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCCc---ccCCC-CCeEEECCCCE--EEEeCCHHHHHhcCCC
Confidence 9999999754 4577899999999999997431 24566 88766554544 45576642 11
Q ss_pred EEEcCC-----Ccc---ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCCCcccc
Q 013890 367 VLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 367 ~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 433 (434)
+..+.. .++ .+..+|+|++++ +|+|||++++|+.++++ +.++.||++++|++||..+..+.+++++.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~ 446 (464)
T 2eq6_A 369 VKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSES 446 (464)
T ss_dssp EEEEEEEGGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTTHH
T ss_pred EEEEEEEcCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHH
Confidence 222111 111 235689998884 79999999999999886 99999999999999999999999998764
No 41
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.9e-48 Score=383.80 Aligned_cols=398 Identities=24% Similarity=0.283 Sum_probs=287.5
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCCccccccCCCC----CCC-CCCcceecCC-
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG----TAR-LPGFHVCVGS- 72 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~----~~~-~~~~~~~~~~- 72 (434)
+.++||+|||||+||+++|..|++.|++ |+|||+++..+.. .+.+++.++.... ... +..+......
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~---V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 80 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFK---TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNV 80 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCC---EEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCE
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 3468999999999999999999999987 9999998643211 0111111110000 000 0000000000
Q ss_pred --CC--------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCC--cEEEeceEEEccCCCcccccCCCC
Q 013890 73 --GG--------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFGV 134 (434)
Q Consensus 73 --~~--------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lilAtG~~~~~p~~~~i 134 (434)
.. .....+++++.+++++.++.+. ++.....+...++ .++.||++|+|||++|..|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~--- 156 (470)
T 1dxl_A 81 EIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-VSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPG--- 156 (470)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-EETTEEEECCSSSCCEEEECSEEEECCCEEECCBTT---
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCC---
Confidence 00 0011345566799999986554 6554334444566 689999999999999988874
Q ss_pred CCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHH
Q 013890 135 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 214 (434)
Q Consensus 135 ~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (434)
++.+..++++ ..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.
T Consensus 157 ~g~~~~~v~~---~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~ 227 (470)
T 1dxl_A 157 VTIDEKKIVS---STGALAL----S-EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-MDAEIRKQFQRS 227 (470)
T ss_dssp BCCCSSSEEC---HHHHTTC----S-SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHH
T ss_pred CCCCcccEEe---HHHhhhh----h-hcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-ccHHHHHHHHHH
Confidence 4544345553 3333222 1 14789999999999999999999999999999999999885 799999999999
Q ss_pred HHHcCcEEEcCCeEEEEEecCCCcEEEEEeC---CC--cEEEcCEEEEccCCccChhh--hh-ccccc-cCCcEEeCCCC
Q 013890 215 YANKGIKIIKGTVAVGFTTNADGEVNEVKLK---DG--RTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETDDFF 285 (434)
Q Consensus 215 l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~---~g--~~i~~d~vv~a~G~~p~~~~--~~-~~~~~-~~g~i~vd~~~ 285 (434)
+++.||++++++.+.+++.++++ ..+.+. +| +++++|.|++|+|++|++++ ++ .++.. .+|+|.||+++
T Consensus 228 l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 305 (470)
T 1dxl_A 228 LEKQGMKFKLKTKVVGVDTSGDG--VKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERF 305 (470)
T ss_dssp HHHSSCCEECSEEEEEEECSSSS--EEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTC
T ss_pred HHHcCCEEEeCCEEEEEEEcCCe--EEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCC
Confidence 99999999999999999873333 345543 44 68999999999999999987 33 35666 46889999999
Q ss_pred CCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC-
Q 013890 286 KTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG- 364 (434)
Q Consensus 286 ~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~- 364 (434)
||++|+|||+|||+..+ ..+..|..||+.||.||++... ...|..+|++.+..|++ ..+|+++.
T Consensus 306 ~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~---~~~~~~~p~~~~~~~~~--a~vG~~e~~ 370 (470)
T 1dxl_A 306 STNVSGVYAIGDVIPGP----------MLAHKAEEDGVACVEYLAGKVG---HVDYDKVPGVVYTNPEV--ASVGKTEEQ 370 (470)
T ss_dssp BCSSTTEEECSTTSSSC----------CCHHHHHHHHHHHHHHHTTSCC---CCCTTSCCEEECSSSEE--EEEECCHHH
T ss_pred ccCCCCEEEEeccCCCC----------ccHHHHHHHHHHHHHHHcCCCc---CCCCCCCCEEEECCCce--EEEcCCHHH
Confidence 99999999999999754 4577899999999999997431 24566778766555544 45576642
Q ss_pred -----cEEEEcCCC-----cc---ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCC
Q 013890 365 -----DTVLFGDND-----LA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGL 428 (434)
Q Consensus 365 -----~~~~~~~~~-----~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 428 (434)
..+.....+ ++ .+..+|+|++++ +|+|||++++|+.++++ +.++.+|++++|++||..+..+.+
T Consensus 371 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~P 450 (470)
T 1dxl_A 371 VKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHP 450 (470)
T ss_dssp HHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSS
T ss_pred HHhcCCcEEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCC
Confidence 112221111 11 245789998884 89999999999998886 999999999999999999989999
Q ss_pred Ccccc
Q 013890 429 SFASK 433 (434)
Q Consensus 429 ~~~~~ 433 (434)
+|++.
T Consensus 451 t~~e~ 455 (470)
T 1dxl_A 451 TMSEA 455 (470)
T ss_dssp CTTHH
T ss_pred ChHHH
Confidence 98764
No 42
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=7.6e-48 Score=377.69 Aligned_cols=397 Identities=20% Similarity=0.243 Sum_probs=290.2
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCCccccccCCCC----CCCCCCcceecCC--
Q 013890 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEG----TARLPGFHVCVGS-- 72 (434)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-- 72 (434)
|++++||+|||||++|+++|..|++.|++ |+|||++.... +..|.+++.++.... ....+.+......
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~ 77 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKR---VALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGT 77 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCc---EEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCC
Confidence 34569999999999999999999999887 99999984310 000111111110000 0000000000000
Q ss_pred CC---------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCC
Q 013890 73 GG---------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGA 137 (434)
Q Consensus 73 ~~---------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~ 137 (434)
.. ...+...+.+.+++++.+ .+..++ .++|.+ ++.++.||++|+|||++|..|+ ++|.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~~~v~~-~g~~~~~d~lviAtGs~p~~p~---i~G~ 150 (463)
T 2r9z_A 78 LDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDG-HARFVD--AHTIEV-EGQRLSADHIVIATGGRPIVPR---LPGA 150 (463)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--TTEEEE-TTEEEEEEEEEECCCEEECCCS---CTTG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEe-EEEEcc--CCEEEE-CCEEEEcCEEEECCCCCCCCCC---CCCc
Confidence 00 001123346679999998 455555 356766 6778999999999999998887 4554
Q ss_pred CCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHH
Q 013890 138 DAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 217 (434)
Q Consensus 138 ~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (434)
+ .+ .+..++..+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++
T Consensus 151 ~--~~---~~~~~~~~~-----~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~ 219 (463)
T 2r9z_A 151 E--LG---ITSDGFFAL-----QQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-FDPLLSATLAENMHA 219 (463)
T ss_dssp G--GS---BCHHHHHHC-----SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH
T ss_pred c--ce---ecHHHHhhh-----hccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-cCHHHHHHHHHHHHH
Confidence 2 12 233443332 124789999999999999999999999999999999988876 799999999999999
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCCc-EEEcCEEEEccCCccChhhh---hccccc-cCCcEEeCCCCCCCCCce
Q 013890 218 KGIKIIKGTVAVGFTTNADGEVNEVKLKDGR-TLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDV 292 (434)
Q Consensus 218 ~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~-~i~~d~vv~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~i 292 (434)
.||++++++.+.+++.++++ ..+.+++|+ ++++|.|++|+|++|+++.+ ..++.. .+|+|.||+++||++|+|
T Consensus 220 ~gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~I 297 (463)
T 2r9z_A 220 QGIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGV 297 (463)
T ss_dssp TTCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTE
T ss_pred CCCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCE
Confidence 99999999999999873333 578888998 89999999999999999732 335666 478899999999999999
Q ss_pred EEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCC-------c
Q 013890 293 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG-------D 365 (434)
Q Consensus 293 ya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~-------~ 365 (434)
||+|||++.+ .++..|..||+.+|.||++.... ....|..+|+.+++.+++..+ |+++. .
T Consensus 298 ya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~~~p~~~~~~~~~a~v--Gl~e~~a~~~~g~ 364 (463)
T 2r9z_A 298 YALGDITGRD----------QLTPVAIAAGRRLAERLFDGQSE-RKLDYDNIPTVVFAHPPLSKV--GLSEPEARERLGD 364 (463)
T ss_dssp EECGGGGTSC----------CCHHHHHHHHHHHHHHHHSCCTT-CCCCCSSCCEEECCSSCEEEE--ECCHHHHHHHHCS
T ss_pred EEEeecCCCc----------ccHHHHHHHHHHHHHHHcCCCCc-ccCCCCCCCEEEeCCCCeEEE--cCCHHHHHhcCCC
Confidence 9999998743 46788999999999999975321 114677889887776766655 65531 1
Q ss_pred EEEE-----cCCCc---cccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCCCccccC
Q 013890 366 TVLF-----GDNDL---ASATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFASKI 434 (434)
Q Consensus 366 ~~~~-----~~~~~---~~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 434 (434)
.+.. ..... .....+|+|+++ ++++|||+|++|+.++++ +.++.+|++++|++||..+..+.+++++.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~ 444 (463)
T 2r9z_A 365 VLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEEL 444 (463)
T ss_dssp CEEEEEEEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGGGG
T ss_pred CEEEEEEEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHH
Confidence 1111 11111 124567899888 489999999999999887 999999999999999999999999998753
No 43
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=2.5e-49 Score=390.93 Aligned_cols=399 Identities=16% Similarity=0.091 Sum_probs=284.8
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCCccccccCCC----CCCCCCCcceecCCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE----GTARLPGFHVCVGSG 73 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 73 (434)
|++.+|||+|||||+||++||..|+++|++ |+|||++...+ +..|.+++.++... .....+.+.......
T Consensus 4 M~~~~~DvvVIGgG~aGl~aA~~la~~G~~---V~liE~~~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~ 80 (492)
T 3ic9_A 4 MKVINVDVAIIGTGTAGMGAYRAAKKHTDK---VVLIEGGAYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRI 80 (492)
T ss_dssp CEEEEEEEEEECCSHHHHHHHHHHHTTCSC---EEEEESSCSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEE
T ss_pred CccCCCCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCCCCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCC
Confidence 333358999999999999999999999987 99999975311 00011122111100 001111111100000
Q ss_pred --CC----CCC-----------HhHHHH-CCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCC
Q 013890 74 --GE----RLL-----------PEWYKE-KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVE 135 (434)
Q Consensus 74 --~~----~~~-----------~~~~~~-~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~ 135 (434)
.. ... ...+.. .+++++.+... -. +.++|.+.++.++.||++|||||++|..|+. +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~-~~--~~~~v~~~~~~~~~~d~lViATGs~p~~p~~---~ 154 (492)
T 3ic9_A 81 SVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAK-FL--DEHTLQVDDHSQVIAKRIVIATGSRPNYPEF---L 154 (492)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEE-EE--ETTEEEETTTEEEEEEEEEECCCEECCCCHH---H
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEE-Ee--cCCEEEEcCCcEEEeCEEEEccCCCCcCCCC---C
Confidence 00 000 011111 24455655322 22 3567888788899999999999999998874 3
Q ss_pred CCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHH
Q 013890 136 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYY 215 (434)
Q Consensus 136 g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (434)
+.....+++. .+...+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+
T Consensus 155 ~~~~~~v~t~---~~~~~~-----~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l 225 (492)
T 3ic9_A 155 AAAGSRLLTN---DNLFEL-----NDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-QDEEMKRYAEKTF 225 (492)
T ss_dssp HTTGGGEECH---HHHTTC-----SSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-CCHHHHHHHHHHH
T ss_pred CccCCcEEcH---HHHhhh-----hhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-CCHHHHHHHHHHH
Confidence 3233445533 332221 124799999999999999999999999999999999998876 7999999999999
Q ss_pred HHcCcEEEcCCeEEEEEecCCCcEEEEEeC--CC--cEEEcCEEEEccCCccChhhh---hccccc-cCCcEEeC-CCCC
Q 013890 216 ANKGIKIIKGTVAVGFTTNADGEVNEVKLK--DG--RTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETD-DFFK 286 (434)
Q Consensus 216 ~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~--~g--~~i~~d~vv~a~G~~p~~~~~---~~~~~~-~~g~i~vd-~~~~ 286 (434)
++. |++++++.+++++.++++ + .+.+. +| +++++|.|++|+|++|+++++ ..++.. ++|+|.|| +++|
T Consensus 226 ~~~-V~i~~~~~v~~i~~~~~~-v-~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~ 302 (492)
T 3ic9_A 226 NEE-FYFDAKARVISTIEKEDA-V-EVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQ 302 (492)
T ss_dssp HTT-SEEETTCEEEEEEECSSS-E-EEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCB
T ss_pred hhC-cEEEECCEEEEEEEcCCE-E-EEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECccccc
Confidence 988 999999999999874333 3 35553 67 689999999999999999863 336666 57889999 9999
Q ss_pred CCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCCCc-
Q 013890 287 TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD- 365 (434)
Q Consensus 287 t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~- 365 (434)
|+.|+|||+|||++.+ ..+..|..||+.||.||++.... ....+..+|+..++.|+++.+ |+++.+
T Consensus 303 t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~-~~~~~~~~p~~~~~~p~~a~v--Glte~~a 369 (492)
T 3ic9_A 303 TSVDHIFVAGDANNTL----------TLLHEAADDGKVAGTNAGAYPVI-AQGQRRAPLSVVFTEPQVASV--GLSLRQI 369 (492)
T ss_dssp CSSTTEEECGGGGTSS----------CSHHHHHHHHHHHHHHHHHTTSC-CEECCCCCEEEECSSSEEEEE--ESCHHHH
T ss_pred CCCCCEEEEEecCCCC----------ccHHHHHHHHHHHHHHHcCCCCC-cccCCCCCcEEEECCCCeEEe--cCCHHHH
Confidence 9999999999999764 45778999999999999974322 125666778766665665554 766521
Q ss_pred ----------EEEEcCCC-----cc---ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhh
Q 013890 366 ----------TVLFGDND-----LA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLK 424 (434)
Q Consensus 366 ----------~~~~~~~~-----~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~ 424 (434)
.+..+..+ ++ ..+.+|+|+++ ++|+|||+|++|++++++ +.++.||++++|++||..+.
T Consensus 370 ~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~ 449 (492)
T 3ic9_A 370 EDLYADQDAANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMP 449 (492)
T ss_dssp HHHCSCSSSCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSC
T ss_pred HhccCccCCccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCC
Confidence 12221111 11 34678999888 579999999999999997 99999999999999999999
Q ss_pred ccCCCcccc
Q 013890 425 NEGLSFASK 433 (434)
Q Consensus 425 ~~~~~~~~~ 433 (434)
.+.++++|.
T Consensus 450 ~~hPt~~e~ 458 (492)
T 3ic9_A 450 FYHPVIEEG 458 (492)
T ss_dssp CCTTCTHHH
T ss_pred CCCCChHHH
Confidence 999998874
No 44
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.3e-48 Score=387.98 Aligned_cols=400 Identities=18% Similarity=0.165 Sum_probs=283.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCC------------CCccccccCCCCC----CCCCCcc
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYER------------PALSKAYLFPEGT----ARLPGFH 67 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~------------~~~~~~~~~~~~~----~~~~~~~ 67 (434)
..|||+|||||+||++||..|++.|++ |+|||+++...+.. |.+++.++..... .....+.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~---V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g 107 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKK---VMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYG 107 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999987 99999964221110 0111111100000 0000000
Q ss_pred eecCCC---C---------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCCc--EEEeceEEEccCCCcc
Q 013890 68 VCVGSG---G---------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGL--IFKYQILVIATGSTVL 127 (434)
Q Consensus 68 ~~~~~~---~---------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~--~~~~d~lilAtG~~~~ 127 (434)
...... . .......++..+++++.+ .+..++.....+...+++ ++.||+||||||++|.
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g-~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~ 186 (519)
T 3qfa_A 108 WKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA-YGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPR 186 (519)
T ss_dssp BCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEEC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcC
Confidence 000000 0 001112345679999987 667677665566665553 7999999999999999
Q ss_pred cccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHH
Q 013890 128 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADI 207 (434)
Q Consensus 128 ~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 207 (434)
.|+ ++|.+. .+ .+..++..+ ...+++++|||+|++|+|+|..|++.|.+|+++++. .+++. +++++
T Consensus 187 ~p~---i~G~~~-~~---~t~~~~~~l-----~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~-~d~~~ 252 (519)
T 3qfa_A 187 YLG---IPGDKE-YC---ISSDDLFSL-----PYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRG-FDQDM 252 (519)
T ss_dssp CCC---CTTHHH-HC---BCHHHHTTC-----SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHHH
T ss_pred CCC---CCCccC-ce---EcHHHHhhh-----hhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccccc-CCHHH
Confidence 887 455321 11 233333222 125788999999999999999999999999999985 56665 79999
Q ss_pred HHHHHHHHHHcCcEEEcCCeEEEEEecCC---Cc-EEEEEeCCC-c--EEEcCEEEEccCCccChhhh---hccccc--c
Q 013890 208 AAFYEGYYANKGIKIIKGTVAVGFTTNAD---GE-VNEVKLKDG-R--TLEADIVVVGVGGRPLISLF---KGQVAE--N 275 (434)
Q Consensus 208 ~~~~~~~l~~~gV~~~~~~~v~~i~~~~~---g~-~~~v~~~~g-~--~i~~d~vv~a~G~~p~~~~~---~~~~~~--~ 275 (434)
.+.+.+.+++.||++++++.+.++...++ +. ...+...+| + ++++|.|++|+|++|+++++ ..++.. .
T Consensus 253 ~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~ 332 (519)
T 3qfa_A 253 ANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEK 332 (519)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTT
T ss_pred HHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCC
Confidence 99999999999999999998888865322 22 223334555 2 57899999999999999853 335666 3
Q ss_pred CCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcc
Q 013890 276 KGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLS 355 (434)
Q Consensus 276 ~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~ 355 (434)
+|+|.||+++||++|+|||+|||+.... ..+..|..||++||+||++.... ...|..+|+..++.|+++
T Consensus 333 ~G~I~Vd~~~~Ts~~~IyA~GD~~~g~~---------~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~p~~a 401 (519)
T 3qfa_A 333 TGKIPVTDEEQTNVPYIYAIGDILEDKV---------ELTPVAIQAGRLLAQRLYAGSTV--KCDYENVPTTVFTPLEYG 401 (519)
T ss_dssp TCCBCCCTTSBCSSTTEEECGGGBSSSC---------CCHHHHHHHHHHHHHHHHSCCCC--CCCCTTCCEEECSSSCEE
T ss_pred CCeEeeCCCCccCCCCEEEEEeccCCCC---------ccHHHHHHHHHHHHHHHcCCCCc--cCCCCcCcEEEECCCceE
Confidence 6889999999999999999999994221 56788999999999999976432 257788898877767666
Q ss_pred eEEeecCCCc--------EEEE-----cCCCc----cccCCcEEEEEEe---CCEEEEEEEecCChHHH-HHHHHHHHcC
Q 013890 356 WQFYGDNVGD--------TVLF-----GDNDL----ASATHKFGTYWIK---DGKVVGVFLESGTPEEN-KAIAKVARVQ 414 (434)
Q Consensus 356 ~~~~G~~~~~--------~~~~-----~~~~~----~~~~~~~~~~~~~---~~~ilG~~~~g~~~~~~-~~~~~~i~~~ 414 (434)
.+ |+++.+ .+.. ..... ...+.+|+|++++ +++|||+|++|++++|+ +.++.||+++
T Consensus 402 ~v--Glte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~ 479 (519)
T 3qfa_A 402 AC--GLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCG 479 (519)
T ss_dssp EE--ECCHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred Ee--cCCHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 55 776521 1111 11000 0135789998883 59999999999999887 9999999999
Q ss_pred CCCCChhhhhccCCCccccC
Q 013890 415 PSVESLDVLKNEGLSFASKI 434 (434)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~ 434 (434)
+|++||+.+.-+.++++|.+
T Consensus 480 ~t~~~l~~~~~~hPt~~E~~ 499 (519)
T 3qfa_A 480 LTKKQLDSTIGIHPVCAEVF 499 (519)
T ss_dssp CBHHHHHHSCCCTTCGGGGG
T ss_pred CCHHHHhccccCCCChHHHH
Confidence 99999999999999998853
No 45
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.2e-48 Score=381.48 Aligned_cols=403 Identities=19% Similarity=0.213 Sum_probs=280.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCCccccccCCCC----CCCCCCcceecC--CCC-
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEG----TARLPGFHVCVG--SGG- 74 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~- 74 (434)
++||+|||||+||++||..|++.|++ |+|||++.... +..|.+++.++.... ......+..... ...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAK---VALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHH
Confidence 48999999999999999999999887 99999985310 000111111100000 000000000000 000
Q ss_pred -------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCC-------------CcEEEeceEEEccCCCccc
Q 013890 75 -------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSAT-------------GLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 75 -------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-------------~~~~~~d~lilAtG~~~~~ 128 (434)
...+.+++++.+++++.++ +..++ .+++.+.+ +.++.||+||||||++|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~id--~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~ 155 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGT-ASFLS--ENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVF 155 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CCCC----------------------------CBSSEEECCCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEee--CCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCC
Confidence 0012234566899999884 33333 24454433 5679999999999999988
Q ss_pred ccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHH
Q 013890 129 LTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIA 208 (434)
Q Consensus 129 p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~ 208 (434)
|+ ++|.+ .+++ ..++..+ . .+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.
T Consensus 156 p~---i~G~~--~~~~---~~~~~~~----~--~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~ 220 (500)
T 1onf_A 156 PP---VKGIE--NTIS---SDEFFNI----K--ESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-FDESVI 220 (500)
T ss_dssp CS---CTTGG--GCEE---HHHHTTC----C--CCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-SCHHHH
T ss_pred CC---CCCCC--cccC---HHHHhcc----C--CCCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-cchhhH
Confidence 87 45542 2333 2333221 1 2789999999999999999999999999999999998875 799999
Q ss_pred HHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcE-EEcCEEEEccCCccChh-h-h-hccccccCCcEEeCCC
Q 013890 209 AFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRT-LEADIVVVGVGGRPLIS-L-F-KGQVAENKGGIETDDF 284 (434)
Q Consensus 209 ~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~-i~~d~vv~a~G~~p~~~-~-~-~~~~~~~~g~i~vd~~ 284 (434)
+.+.+.+++.||++++++.+++++.++++. ..+.+++|++ +++|.|++|+|++|+++ + + ..++..++|+|.||++
T Consensus 221 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~~ 299 (500)
T 1onf_A 221 NVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDEN 299 (500)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECTT
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECCC
Confidence 999999999999999999999998743343 4678889988 99999999999999996 3 3 3355556788999999
Q ss_pred CCCCCCceEEecccccccccc-----------------------cC-cccccccHHHHHHHHHHHHHHHhccCCCCcccC
Q 013890 285 FKTSADDVYAVGDVATFPMKL-----------------------YR-EMRRVEHVDHARKSAEQAVKTIMATEGGKTVTG 340 (434)
Q Consensus 285 ~~t~~~~iya~Gd~~~~~~~~-----------------------~~-~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~ 340 (434)
+||++|+|||+|||+..+... .+ ....+.++..|.+||++||+||++... ....
T Consensus 300 ~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~--~~~~ 377 (500)
T 1onf_A 300 QRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKT--RKTN 377 (500)
T ss_dssp CBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTT--CCCC
T ss_pred cccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCC--ccCC
Confidence 999999999999999532100 00 002346788999999999999997432 1256
Q ss_pred CCCCCeeEEeecCcceEEeecCCC--------cEEEE-----cCCC-------ccccCCcEEEEEE--eCCEEEEEEEec
Q 013890 341 YDYLPYFYSRAFDLSWQFYGDNVG--------DTVLF-----GDND-------LASATHKFGTYWI--KDGKVVGVFLES 398 (434)
Q Consensus 341 ~~~~p~~~~~~~~~~~~~~G~~~~--------~~~~~-----~~~~-------~~~~~~~~~~~~~--~~~~ilG~~~~g 398 (434)
|..+|++.++.++++.+ |+++. ..+.. .... ......+|+|+++ ++++|||+|++|
T Consensus 378 ~~~~p~~~~~~~~~a~v--Gl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g 455 (500)
T 1onf_A 378 YKLIPTVIFSHPPIGTI--GLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIG 455 (500)
T ss_dssp CSSCCEEECCSSCEEEE--ECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEES
T ss_pred CCCCCeEEEcCcceEEE--eCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEEC
Confidence 77789877766665554 76531 11111 1111 1124567899888 579999999999
Q ss_pred CChHHH-HHHHHHHHcCCCCCChhhhhccCCCcccc
Q 013890 399 GTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 399 ~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 433 (434)
++++++ +.++.||++++|++||..+..+.+++++.
T Consensus 456 ~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~ 491 (500)
T 1onf_A 456 LNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEE 491 (500)
T ss_dssp TTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSTTH
T ss_pred CCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHH
Confidence 998886 99999999999999999999999999875
No 46
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=1.8e-48 Score=384.84 Aligned_cols=399 Identities=19% Similarity=0.192 Sum_probs=285.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC-------CCCCC------ccccccCCCC----CCCCCCc
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP-------YERPA------LSKAYLFPEG----TARLPGF 66 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~-------~~~~~------~~~~~~~~~~----~~~~~~~ 66 (434)
..|||+|||||+||++||..|+++|++ |+|||+....+ +...+ +++.++.... ......+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~ 84 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGAR---VACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAY 84 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCE---EEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhc
Confidence 468999999999999999999999987 99999532111 11111 1111100000 0000000
Q ss_pred ceecCCC---C---------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCC-cEEEeceEEEccCCCcc
Q 013890 67 HVCVGSG---G---------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG-LIFKYQILVIATGSTVL 127 (434)
Q Consensus 67 ~~~~~~~---~---------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~-~~~~~d~lilAtG~~~~ 127 (434)
....... . .......++..+++++.+ ....++.....+...++ .++.||++|||||++|.
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~ 163 (483)
T 3dgh_A 85 GWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYING-LGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPR 163 (483)
T ss_dssp TBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEECCCEEEC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcC
Confidence 0000000 0 001112345678999987 55555655445655566 47999999999999999
Q ss_pred cccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHH
Q 013890 128 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADI 207 (434)
Q Consensus 128 ~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 207 (434)
.|+ ++|.+.. .+ +..++..+ ...+++++|||+|++|+|+|..|.+.|.+|+++++. .+++. +++++
T Consensus 164 ~p~---i~G~~~~-~~---~~~~~~~~-----~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~~ 229 (483)
T 3dgh_A 164 YPD---IPGAVEY-GI---TSDDLFSL-----DREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLRG-FDQQM 229 (483)
T ss_dssp CCS---STTHHHH-CB---CHHHHTTC-----SSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSSTT-SCHHH
T ss_pred CCC---CCCcccc-cC---cHHHHhhh-----hhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCCcc-cCHHH
Confidence 887 4554211 11 33333221 124789999999999999999999999999999884 56665 79999
Q ss_pred HHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc-----EEEcCEEEEccCCccChhhh---hccccccCCcE
Q 013890 208 AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGR-----TLEADIVVVGVGGRPLISLF---KGQVAENKGGI 279 (434)
Q Consensus 208 ~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~-----~i~~d~vv~a~G~~p~~~~~---~~~~~~~~g~i 279 (434)
.+.+.+.+++.||++++++.+.+++..+++.+ .+.+.++. ++++|.|++|+|++|+++++ ..++..++|+|
T Consensus 230 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i 308 (483)
T 3dgh_A 230 AELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKI 308 (483)
T ss_dssp HHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBB
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEE
Confidence 99999999999999999999999987444443 46665543 79999999999999999876 33566655999
Q ss_pred EeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEe
Q 013890 280 ETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFY 359 (434)
Q Consensus 280 ~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 359 (434)
.||+++||++|+|||+|||+.... ..+..|..||++||+||++.... ...|..+|+.+++.|+++.+
T Consensus 309 ~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~p~~a~v-- 375 (483)
T 3dgh_A 309 PVDSQEATNVANIYAVGDIIYGKP---------ELTPVAVLAGRLLARRLYGGSTQ--RMDYKDVATTVFTPLEYACV-- 375 (483)
T ss_dssp CCCTTCBCSSTTEEECSTTBTTSC---------CCHHHHHHHHHHHHHHHHSCCCC--CCCCTTCCEEECSSSEEEEE--
T ss_pred EECcCCccCCCCEEEEEcccCCCC---------ccHHHHHHHHHHHHHHHcCCCCC--cCCCCCCCEEEECCCccEEE--
Confidence 999999999999999999984221 46778999999999999976432 25778899988887766655
Q ss_pred ecCCCc--------EEEEc--CC-Cc------cccCCcEEEEEE--e-CCEEEEEEEecCChHHH-HHHHHHHHcCCCCC
Q 013890 360 GDNVGD--------TVLFG--DN-DL------ASATHKFGTYWI--K-DGKVVGVFLESGTPEEN-KAIAKVARVQPSVE 418 (434)
Q Consensus 360 G~~~~~--------~~~~~--~~-~~------~~~~~~~~~~~~--~-~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~ 418 (434)
|+++.+ .+... .. +. ...+.+|+|+++ + +|+|||+|++|++++|+ +.++.||++++|++
T Consensus 376 Glte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~ 455 (483)
T 3dgh_A 376 GLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTIN 455 (483)
T ss_dssp ECCHHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHH
T ss_pred eCCHHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH
Confidence 766521 11111 01 10 123568999887 3 69999999999999887 99999999999999
Q ss_pred ChhhhhccCCCccccC
Q 013890 419 SLDVLKNEGLSFASKI 434 (434)
Q Consensus 419 ~~~~~~~~~~~~~~~~ 434 (434)
||..+.-+.++++|.+
T Consensus 456 ~l~~~~~~hPt~~e~~ 471 (483)
T 3dgh_A 456 TLINTVGIHPTTAEEF 471 (483)
T ss_dssp HHHTSCCCSSCSGGGG
T ss_pred HHhhcccCCCChHHHH
Confidence 9999999999998864
No 47
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1.2e-47 Score=379.20 Aligned_cols=398 Identities=19% Similarity=0.198 Sum_probs=283.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC------C------CCccccccCCC-------------
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE------R------PALSKAYLFPE------------- 58 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~------~------~~~~~~~~~~~------------- 58 (434)
++|||+|||||+||++||..|++.|++ |+|||+.+..++. . |.+++.++...
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~---V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g 81 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKK---VAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYG 81 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCe---EEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999987 9999984322211 0 01111110000
Q ss_pred -CCC--CCCCcceecC------CCCCCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCC--cEEEeceEEEccCCCcc
Q 013890 59 -GTA--RLPGFHVCVG------SGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVL 127 (434)
Q Consensus 59 -~~~--~~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lilAtG~~~~ 127 (434)
... ....+..... ..........+++.+++++.+ .+..++.....+...++ .++.||+||||||++|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 82 WEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEEC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCC
Confidence 000 0000000000 000001222355679999887 55555544445555565 47999999999999998
Q ss_pred ccc-CCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHH
Q 013890 128 RLT-DFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTAD 206 (434)
Q Consensus 128 ~p~-~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~ 206 (434)
.|+ . +|.+. .++ +..++..+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.. +++. ++++
T Consensus 161 ~p~~i---~G~~~-~~~---~~~~~~~~-----~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~l~~-~d~~ 226 (488)
T 3dgz_A 161 YPTQV---KGALE-YGI---TSDDIFWL-----KESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI-PLRG-FDQQ 226 (488)
T ss_dssp CCSSC---BTHHH-HCB---CHHHHTTC-----SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SSTT-SCHH
T ss_pred CCCCC---CCccc-ccC---cHHHHHhh-----hhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-cccc-CCHH
Confidence 887 4 44321 111 33333222 1257899999999999999999999999999999864 5554 7999
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCC---Cc--EEEcCEEEEccCCccChhhh---hcccccc--C
Q 013890 207 IAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKD---GR--TLEADIVVVGVGGRPLISLF---KGQVAEN--K 276 (434)
Q Consensus 207 ~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~---g~--~i~~d~vv~a~G~~p~~~~~---~~~~~~~--~ 276 (434)
+.+.+.+.+++.||++++++.+.++...+++.+ .+.+.+ |+ ++++|.|++|+|++|+++++ ..++..+ +
T Consensus 227 ~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~ 305 (488)
T 3dgz_A 227 MSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKN 305 (488)
T ss_dssp HHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSS
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCC
Confidence 999999999999999999999999987444433 344433 54 47999999999999999874 3356554 6
Q ss_pred CcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcce
Q 013890 277 GGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSW 356 (434)
Q Consensus 277 g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~ 356 (434)
|+|.||+++||++|+|||+|||+.... .++..|..||++||.||++.... ...|..+|+.+++.|+++.
T Consensus 306 G~i~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~p~~a~ 374 (488)
T 3dgz_A 306 QKIIVDAQEATSVPHIYAIGDVAEGRP---------ELTPTAIKAGKLLAQRLFGKSST--LMDYSNVPTTVFTPLEYGC 374 (488)
T ss_dssp CCBCCCTTSBCSSTTEEECGGGBTTCC---------CCHHHHHHHHHHHHHHHHSCCCC--CCCCTTCCEEECSSSEEEE
T ss_pred CeEeECCCCccCCCCEEEeEEecCCCC---------cchhHHHHHHHHHHHHHcCCCCc--cCCCCCCCEEEECCCCeEE
Confidence 889999999999999999999985321 46778999999999999976432 2567889998887777655
Q ss_pred EEeecCCCc--------EEEEc--C-CCcc------ccCCcEEEEEEe---CCEEEEEEEecCChHHH-HHHHHHHHcCC
Q 013890 357 QFYGDNVGD--------TVLFG--D-NDLA------SATHKFGTYWIK---DGKVVGVFLESGTPEEN-KAIAKVARVQP 415 (434)
Q Consensus 357 ~~~G~~~~~--------~~~~~--~-~~~~------~~~~~~~~~~~~---~~~ilG~~~~g~~~~~~-~~~~~~i~~~~ 415 (434)
+ |+++.+ .+... . .+.. ..+.+|+|++++ +++|||+|++|++++|+ +.++.||++++
T Consensus 375 v--Glte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~ 452 (488)
T 3dgz_A 375 V--GLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGA 452 (488)
T ss_dssp E--ECCHHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTC
T ss_pred E--eCCHHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCC
Confidence 5 766521 11111 1 1100 126789998874 69999999999999887 99999999999
Q ss_pred CCCChhhhhccCCCcccc
Q 013890 416 SVESLDVLKNEGLSFASK 433 (434)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~ 433 (434)
|++||..+.-+.++++|.
T Consensus 453 t~~~l~~~~~~hPt~~e~ 470 (488)
T 3dgz_A 453 SYAQVMQTVGIHPTCSEE 470 (488)
T ss_dssp BHHHHHTSCCCSSCSTHH
T ss_pred CHHHHhccccCCCChHHH
Confidence 999999999999999875
No 48
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=1.3e-46 Score=368.91 Aligned_cols=392 Identities=22% Similarity=0.267 Sum_probs=284.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCCccccccCCCC----CCCCCCcceecCC---CC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG----TARLPGFHVCVGS---GG 74 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~---~~ 74 (434)
|||+|||||+||+++|..|++.|++ |+|||+++..+.. .+.+++.++.... ... +.+...... ..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~---V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~~~~~~~ 77 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMK---VGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVKGVELDL 77 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEECCEEECH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCe---EEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccCCCccCH
Confidence 7999999999999999999999887 9999998543210 0111111110000 000 000000000 00
Q ss_pred --------------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcC-CCcEEEeceEEEccCCCcccccCCCCCCCCC
Q 013890 75 --------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSA-TGLIFKYQILVIATGSTVLRLTDFGVEGADA 139 (434)
Q Consensus 75 --------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~-~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~ 139 (434)
.....+++++.+++++.++.+ .++ .+.+.+. ++.++.||+||+|||++|..|+. ++.+.
T Consensus 78 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i~--~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~---~g~~~ 151 (455)
T 2yqu_A 78 PALMAHKDKVVQANTQGVEFLFKKNGIARHQGTAR-FLS--ERKVLVEETGEELEARYILIATGSAPLIPPW---AQVDY 151 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-ESS--SSEEEETTTCCEEEEEEEEECCCEEECCCTT---BCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Eec--CCeEEEeeCCEEEEecEEEECCCCCCCCCCC---CCCCc
Confidence 001134556679999998543 333 3444443 56789999999999999988874 44443
Q ss_pred CCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcC
Q 013890 140 KNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKG 219 (434)
Q Consensus 140 ~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 219 (434)
.++++ ..++..+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.|
T Consensus 152 ~~v~~---~~~~~~~-----~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~~~l~~~G 222 (455)
T 2yqu_A 152 ERVVT---STEALSF-----PEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-MDLEVSRAAERVFKKQG 222 (455)
T ss_dssp SSEEC---HHHHTCC-----SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHHT
T ss_pred CcEec---hHHhhcc-----ccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-cCHHHHHHHHHHHHHCC
Confidence 45553 3333221 114789999999999999999999999999999999988885 79999999999999999
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhh--hh-ccccc-cCCcEEeCCCCCCCCCceEEe
Q 013890 220 IKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETDDFFKTSADDVYAV 295 (434)
Q Consensus 220 V~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~--~~-~~~~~-~~g~i~vd~~~~t~~~~iya~ 295 (434)
|+++++++|++++.+++ ...+.+++|+++++|.||+|+|++|++++ ++ .++.. .+|+|.||+++||+.|+|||+
T Consensus 223 v~i~~~~~V~~i~~~~~--~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~ 300 (455)
T 2yqu_A 223 LTIRTGVRVTAVVPEAK--GARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAI 300 (455)
T ss_dssp CEEECSCCEEEEEEETT--EEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEEC
T ss_pred CEEEECCEEEEEEEeCC--EEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEE
Confidence 99999999999987332 24577778889999999999999999976 33 35555 457899999999999999999
Q ss_pred cccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCC------CcEEEE
Q 013890 296 GDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTVLF 369 (434)
Q Consensus 296 Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~------~~~~~~ 369 (434)
|||+..+ ..+..|..||+.+|.||.+... ...+..+|++.+..+++ ..+|.++ +..+..
T Consensus 301 GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~---~~~~~~~p~~~~~~~~~--a~~G~~~~~a~~~g~~~~~ 365 (455)
T 2yqu_A 301 GDVVRGP----------MLAHKASEEGIAAVEHMVRGFG---HVDYQAIPSVVYTHPEI--AAVGYTEEELKAQGIPYKV 365 (455)
T ss_dssp GGGSSSC----------CCHHHHHHHHHHHHHHHHHSCC---CCCGGGCCEEECSSSEE--EEEECCHHHHHHHTCCEEE
T ss_pred ecCCCCc----------cCHHHHHHhHHHHHHHHcCCCc---cCCCCCCCEEEEcCCce--EEEECCHHHHHHcCCCEEE
Confidence 9999754 4577899999999999997421 24556677765544544 4557654 212222
Q ss_pred cCCC-----c---cccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCCCcccc
Q 013890 370 GDND-----L---ASATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 370 ~~~~-----~---~~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 433 (434)
+..+ + ..+..+|+|++++ +|+|||++++|+.+.++ +.++.+|++++|++|+.++..+.++|++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~e~ 440 (455)
T 2yqu_A 366 GKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEI 440 (455)
T ss_dssp EEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTHHH
T ss_pred EEEEcccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHH
Confidence 2111 1 0235678998884 89999999999998886 99999999999999999999999998764
No 49
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.6e-46 Score=363.65 Aligned_cols=391 Identities=21% Similarity=0.224 Sum_probs=281.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCCccccccCCCC----CCCC-----CCcceecC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEG----TARL-----PGFHVCVG 71 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~ 71 (434)
.++||+|||||+||++||..|++.|++ |+|||++...+ ...+.+++.++.... .... .++.....
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~---V~lie~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 80 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIP---TVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASP 80 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCE---EEEEccCCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCC
Confidence 358999999999999999999999987 99999954210 001112222110000 0000 00000000
Q ss_pred CCCCC---------------CCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCC
Q 013890 72 SGGER---------------LLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEG 136 (434)
Q Consensus 72 ~~~~~---------------~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g 136 (434)
..... ...+++++.+++++.++.+. ++ .+++.+.+ .++.||+||||||++|..|+. ++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~~--~~~v~v~~-~~~~~d~lviATGs~p~~~~~--~~~ 154 (458)
T 1lvl_A 81 RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-LD--GKQVEVDG-QRIQCEHLLLATGSSSVELPM--LPL 154 (458)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-EE--TTEEEETT-EEEECSEEEECCCEEECCBTT--BCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-cc--CCEEEEee-EEEEeCEEEEeCCCCCCCCCC--CCc
Confidence 00000 01245667899999986544 43 56777765 779999999999999987763 232
Q ss_pred CCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHH
Q 013890 137 ADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYA 216 (434)
Q Consensus 137 ~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~ 216 (434)
+ ..++ +..++..+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.++
T Consensus 155 -~-~~v~---~~~~~~~~~-----~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~ 223 (458)
T 1lvl_A 155 -G-GPVI---SSTEALAPK-----ALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT-YDSELTAPVAESLK 223 (458)
T ss_dssp -B-TTEE---CHHHHTCCS-----SCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHH
T ss_pred -c-CcEe---cHHHHhhhh-----ccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHH
Confidence 2 1344 344433221 14789999999999999999999999999999999999884 79999999999999
Q ss_pred HcCcEEEcCCeEEEEEecCCCcEEEEEeCCC--cEEEcCEEEEccCCccChhhh---hccccccCCcEEeCCCCCCCCCc
Q 013890 217 NKGIKIIKGTVAVGFTTNADGEVNEVKLKDG--RTLEADIVVVGVGGRPLISLF---KGQVAENKGGIETDDFFKTSADD 291 (434)
Q Consensus 217 ~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g--~~i~~d~vv~a~G~~p~~~~~---~~~~~~~~g~i~vd~~~~t~~~~ 291 (434)
+.||++++++.+.+++. ++ ..+...+| +++++|.|++|+|++|+++++ ..++..++++|.||+++||+.|+
T Consensus 224 ~~gv~i~~~~~v~~i~~--~~--v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~~i~vd~~~~t~~~~ 299 (458)
T 1lvl_A 224 KLGIALHLGHSVEGYEN--GC--LLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDERCQTSMHN 299 (458)
T ss_dssp HHTCEEETTCEEEEEET--TE--EEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETTEECCCTTCBCSSTT
T ss_pred HCCCEEEECCEEEEEEe--CC--EEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCCEEeECCCCcCCCCC
Confidence 99999999999999975 22 34554456 689999999999999999853 33555532299999999999999
Q ss_pred eEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEeecCC------Cc
Q 013890 292 VYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GD 365 (434)
Q Consensus 292 iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G~~~------~~ 365 (434)
|||+|||+..+ ..+..|..||+.||.||.+... ...+..+|++.+..|++ ..+|+++ +.
T Consensus 300 Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~---~~~~~~~p~~~~~~p~~--a~vG~~e~~a~~~g~ 364 (458)
T 1lvl_A 300 VWAIGDVAGEP----------MLAHRAMAQGEMVAEIIAGKAR---RFEPAAIAAVCFTDPEV--VVVGKTPEQASQQGL 364 (458)
T ss_dssp EEECGGGGCSS----------CCHHHHHHHHHHHHHHHTTCCC---CCCCSCCCEEECSSSEE--EEEECCHHHHHHTTC
T ss_pred EEEeeccCCCc----------ccHHHHHHHHHHHHHHhcCCCc---cCCCCCCCEEEECCCCe--EEEeCCHHHHHHcCC
Confidence 99999999854 4577899999999999997431 24566778766555554 4457654 21
Q ss_pred EEEEcCCC-----cc---ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhhccCCCcccc
Q 013890 366 TVLFGDND-----LA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 366 ~~~~~~~~-----~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 433 (434)
.+..+..+ .. ....+|+|+++ ++++|||++++|+.+.++ +.++.+|++++|++|+..+..+.+++++.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~ 443 (458)
T 1lvl_A 365 DCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGEA 443 (458)
T ss_dssp CEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTTHH
T ss_pred CEEEEEEECccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHH
Confidence 22222111 11 23568999888 579999999999998886 99999999999999999999999998764
No 50
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=2.5e-45 Score=371.56 Aligned_cols=397 Identities=17% Similarity=0.185 Sum_probs=277.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-Cc-----------cccccCCC-----------CC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-AL-----------SKAYLFPE-----------GT 60 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~-~~-----------~~~~~~~~-----------~~ 60 (434)
..|||+|||||+||++||.+|++.|++ |+|||+....+.... .+ ++.+.... ..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~---v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g 182 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAK---TAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG 182 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCe---EEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCC
Confidence 368999999999999999999999987 999998422111000 00 00000000 00
Q ss_pred CCCCCcceecCCCCCCC---------------CHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCC--cEEEeceEEEccC
Q 013890 61 ARLPGFHVCVGSGGERL---------------LPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATG 123 (434)
Q Consensus 61 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lilAtG 123 (434)
...+... .. ..... ....+...+++++.+ ....++.....+...++ .++.||+||||||
T Consensus 183 ~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtG 258 (598)
T 2x8g_A 183 WSLDRSK--IS-HNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLISPHEVQITDKNQKVSTITGNKIILATG 258 (598)
T ss_dssp CCCCGGG--CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEEECCC
T ss_pred ccccCCc--Cc-cCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCC
Confidence 0000000 00 00000 111244578999886 55666654434444555 4689999999999
Q ss_pred CCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCccc
Q 013890 124 STVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLF 203 (434)
Q Consensus 124 ~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~ 203 (434)
++|+.|+ ++|.+. ..++ ..++..+ ...+++++|||+|++|+|+|..|++.|.+|+++++. .+++. +
T Consensus 259 s~p~~p~---i~G~~~-~~~~---~~~~~~~-----~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~ 324 (598)
T 2x8g_A 259 ERPKYPE---IPGAVE-YGIT---SDDLFSL-----PYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRG-F 324 (598)
T ss_dssp EEECCCS---STTHHH-HCEE---HHHHTTC-----SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-S
T ss_pred CCCCCCC---CCCccc-ceEc---HHHHhhC-----ccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCc-C
Confidence 9998887 455321 1222 2222111 125789999999999999999999999999999988 55654 7
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEec-----CC---CcE-EEEEeCCCcEEE--cCEEEEccCCccChhhh---h
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTN-----AD---GEV-NEVKLKDGRTLE--ADIVVVGVGGRPLISLF---K 269 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~-----~~---g~~-~~v~~~~g~~i~--~d~vv~a~G~~p~~~~~---~ 269 (434)
++++.+.+.+.+++.||++++++.+.++... .+ +.+ ..+.+.+|++++ +|.|++|+|++|+++++ .
T Consensus 325 d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~ 404 (598)
T 2x8g_A 325 DQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCET 404 (598)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGG
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchh
Confidence 9999999999999999999999988888542 11 322 233356787665 99999999999999864 3
Q ss_pred ccccc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeE
Q 013890 270 GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFY 348 (434)
Q Consensus 270 ~~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~ 348 (434)
.++.. .+|+|.||+++||++|+|||+|||+.... ..+..|..||+.||.||++.... ...|..+|+.+
T Consensus 405 ~gl~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~~~~--~~~~~~~p~~~ 473 (598)
T 2x8g_A 405 VGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKP---------QLTPVAIQAGRYLARRLFAGATE--LTDYSNVATTV 473 (598)
T ss_dssp GCCCBCTTSCBCCCTTSBCSSTTEEECGGGBTTSC---------CCHHHHHHHHHHHHHHHHHCCCC--CCCCTTCCEEE
T ss_pred cCceECCCCcEEeCCCCcCCCCCEEEEeeecCCCC---------ccHHHHHHhHHHHHHHHhcCCCc--ccCCCCCcEEE
Confidence 35666 56889999999999999999999964321 46788999999999999975432 25677889887
Q ss_pred EeecCcceEEeecCCCc--------EEEEcC--CCc---c----ccCCcEEEEEEe---CCEEEEEEEecCChHHH-HHH
Q 013890 349 SRAFDLSWQFYGDNVGD--------TVLFGD--NDL---A----SATHKFGTYWIK---DGKVVGVFLESGTPEEN-KAI 407 (434)
Q Consensus 349 ~~~~~~~~~~~G~~~~~--------~~~~~~--~~~---~----~~~~~~~~~~~~---~~~ilG~~~~g~~~~~~-~~~ 407 (434)
++.|+++.+ |+++.+ .+.... ..+ . ....+|+|++++ +|+|||+|++|++++++ +.+
T Consensus 474 ~~~~~~a~v--Gl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~ 551 (598)
T 2x8g_A 474 FTPLEYGAC--GLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGY 551 (598)
T ss_dssp CSSSCEEEE--ECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHH
T ss_pred ECCCceEEE--eCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHH
Confidence 776666654 655411 111111 100 0 124679998874 79999999999999887 999
Q ss_pred HHHHHcCCCCCChhhhhccCCCccccC
Q 013890 408 AKVARVQPSVESLDVLKNEGLSFASKI 434 (434)
Q Consensus 408 ~~~i~~~~~~~~~~~~~~~~~~~~~~~ 434 (434)
+.||++++|++||+.+.-+.+++++.+
T Consensus 552 ~~ai~~~~t~~~l~~~~~~hPt~~e~~ 578 (598)
T 2x8g_A 552 AVAIKMGATKADFDRTIGIHPTCSETF 578 (598)
T ss_dssp HHHHHTTCBHHHHHHSCCCSSCSGGGG
T ss_pred HHHHHcCCCHHHHhhccccCCCHHHHH
Confidence 999999999999999999999998753
No 51
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.8e-41 Score=313.47 Aligned_cols=298 Identities=21% Similarity=0.246 Sum_probs=213.3
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHh
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 80 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (434)
|++..|||+||||||||++||.+|+++|++ |+|||++.. ...+........+|++....+.........
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~---V~liE~~~~--------gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~ 70 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLK---TVMIERGIP--------GGQMANTEEVENFPGFEMITGPDLSTKMFE 70 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCT--------TGGGGGCSCBCCSTTCSSBCHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCC--------CCeeecccccCCcCCccccchHHHHHHHHH
Confidence 555579999999999999999999999987 999998742 112222222333444332111111122334
Q ss_pred HHHHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHh
Q 013890 81 WYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKA 160 (434)
Q Consensus 81 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~ 160 (434)
+..+.+..+..+..+...+.....+...+++++.||++|||||++|+.|+++|.+......++++...+. . .
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~-~-------~ 142 (312)
T 4gcm_A 71 HAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDG-A-------F 142 (312)
T ss_dssp HHHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHG-G-------G
T ss_pred HHhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCc-c-------c
Confidence 4556777777776777777767777777888999999999999999988854433333344554322111 1 1
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEE
Q 013890 161 KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVN 240 (434)
Q Consensus 161 ~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~ 240 (434)
.++++++|||+|++|+|+|..|++.|.+|+++++.+++++. . ....+.+++.++.......+...... +....
T Consensus 143 ~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 215 (312)
T 4gcm_A 143 FKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQ---R---ILQDRAFKNDKIDFIWSHTLKSINEK-DGKVG 215 (312)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC---H---HHHHHHHHCTTEEEECSEEEEEEEEE-TTEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcc---h---hHHHHHHHhcCcceeeecceeeeecc-ccccc
Confidence 26899999999999999999999999999999999888763 1 12234567788888888777766542 22111
Q ss_pred E---EEe--CCCcEEEcCEEEEccCCccChhhhhc-cccccCCcEEeCCCCCCCCCceEEecccccccccccCccccccc
Q 013890 241 E---VKL--KDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEH 314 (434)
Q Consensus 241 ~---v~~--~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~ 314 (434)
. ... .++..+++|.|++++|.+|+..++.. ++..++|+|.||+++|||+|+|||+|||++.+. .+
T Consensus 216 ~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~---------~~ 286 (312)
T 4gcm_A 216 SVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGL---------RQ 286 (312)
T ss_dssp EEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTTSCBCCCTTSBCSSTTEEECSTTBSCSC---------CS
T ss_pred cceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecCCCeEeeCCCCccCCCCEEEEeecCCCcc---------hH
Confidence 1 112 23357899999999999999998865 444478899999999999999999999997432 46
Q ss_pred HHHHHHHHHHHHHHHhccC
Q 013890 315 VDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 315 ~~~A~~~g~~aa~~i~~~~ 333 (434)
+..|..||+.||.||...+
T Consensus 287 ~~~A~~~G~~AA~~i~~~L 305 (312)
T 4gcm_A 287 IVTATGDGSIAAQSAAEYI 305 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7789999999999997543
No 52
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=5.8e-40 Score=309.36 Aligned_cols=303 Identities=17% Similarity=0.200 Sum_probs=222.5
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCC-CCCCCCCcceecCCCCCCCCH
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPE-GTARLPGFHVCVGSGGERLLP 79 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (434)
||++++||+|||||++|+++|..|++.|++ |+|||+++....... ...+. .....+.+...........+.
T Consensus 1 m~~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gg~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~ 72 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTGLFAGFYVGMRGLS---FRFVDPLPEPGGQLT-----ALYPEKYIYDVAGFPKVYAKDLVKGLV 72 (335)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSCHHHH-----HTCTTSEECCSTTCSSEEHHHHHHHHH
T ss_pred CCCCcCcEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCCCeee-----ccCCCceeeccCCCCCCCHHHHHHHHH
Confidence 777789999999999999999999999887 999999865321100 00000 001111111000000011233
Q ss_pred hHHHHCCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCC---cccccCCCCCCCC---CCCEEE-EeCHHH
Q 013890 80 EWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGST---VLRLTDFGVEGAD---AKNIFY-LREIDD 150 (434)
Q Consensus 80 ~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~---~~~p~~~~i~g~~---~~~v~~-~~~~~~ 150 (434)
+.+.+.+++++.+++|..++.+.+ .+.+.++.++.||+||+|||+. |..|+ ++|.+ ...+++ +.+..
T Consensus 73 ~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~---i~g~~~~~~~~~~~~~~~~~- 148 (335)
T 2zbw_A 73 EQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIG---APGEREFEGRGVYYAVKSKA- 148 (335)
T ss_dssp HHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCC---CTTTTTTBTTTEESSCSCGG-
T ss_pred HHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCC---CCChhhccCcEEEEecCchh-
Confidence 445567899988889999987654 3566677789999999999995 55454 44432 223432 12211
Q ss_pred HHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 013890 151 ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 151 ~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.+ .++..+.+.+.+++.||+++.++.+.+
T Consensus 149 ---------~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---~~~~~~~l~~~l~~~gv~v~~~~~v~~ 216 (335)
T 2zbw_A 149 ---------EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA---HEASVKELMKAHEEGRLEVLTPYELRR 216 (335)
T ss_dssp ---------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---CHHHHHHHHHHHHTTSSEEETTEEEEE
T ss_pred ---------hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---cHHHHHHHHhccccCCeEEecCCccee
Confidence 12578999999999999999999999999999999987765 467778888889999999999999999
Q ss_pred EEecCCCcEEEEEeC---CC--cEEEcCEEEEccCCccChhhhhc-cccccCCcEEeCCCCCCCCCceEEeccccccccc
Q 013890 231 FTTNADGEVNEVKLK---DG--RTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMK 304 (434)
Q Consensus 231 i~~~~~g~~~~v~~~---~g--~~i~~d~vv~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~ 304 (434)
+.. ++.+..+.+. +| +++++|.|++|+|++|+.++++. ++..++|+|.||+++||+.|+|||+|||+..+..
T Consensus 217 i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~ 294 (335)
T 2zbw_A 217 VEG--DERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEKNKIKVDTTMATSIPGVYACGDIVTYPGK 294 (335)
T ss_dssp EEE--SSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEETTEEECCTTCBCSSTTEEECSTTEECTTC
T ss_pred Ecc--CCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccCCeeeeCCCCCCCCCCEEEeccccccCcc
Confidence 987 4555566665 67 57999999999999999887754 5555678999999999999999999999976431
Q ss_pred ccCcccccccHHHHHHHHHHHHHHHhccCCCC
Q 013890 305 LYREMRRVEHVDHARKSAEQAVKTIMATEGGK 336 (434)
Q Consensus 305 ~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 336 (434)
...+..|..||+.+|.||.+...+.
T Consensus 295 -------~~~~~~A~~~g~~aa~~i~~~l~~~ 319 (335)
T 2zbw_A 295 -------LPLIVLGFGEAAIAANHAAAYANPA 319 (335)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred -------hhhhhhhHHHHHHHHHHHHHHhhhh
Confidence 1578889999999999998876543
No 53
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=3.4e-40 Score=324.99 Aligned_cols=297 Identities=20% Similarity=0.294 Sum_probs=227.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHH--
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY-- 82 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 82 (434)
+++|||||||+||+++|..|++.+++ |+|||+++++.|. |.+... .. ..+..... ........
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~---VtLId~~~~~~~~-PlL~~v-a~----G~l~~~~i------~~p~~~~~~~ 106 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYN---VSIISPRSYFLFT-PLLPSA-PV----GTVDEKSI------IEPIVNFALK 106 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCE---EEEEESSSEEECG-GGGGGT-TT----TSSCGGGG------EEEHHHHHTT
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCc---EEEECCCCCcccc-cchhHH-hh----ccccHHHh------hhhHHHHHHh
Confidence 56899999999999999999876665 9999999875543 322110 00 00100000 01112222
Q ss_pred HHCCcEEEcCCeEEEEeCCCCEEEcC--------------------CCcEEEeceEEEccCCCcccccCCCCCCCCCCCE
Q 013890 83 KEKGIELILSTEIVRADIASKTLLSA--------------------TGLIFKYQILVIATGSTVLRLTDFGVEGADAKNI 142 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~--------------------~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v 142 (434)
.+.+++++.+ +++.||++.++|.+. ++.++.||+||||||+.|..++ +||.. .+.
T Consensus 107 ~~~~v~~~~~-~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~---ipG~~-e~a 181 (502)
T 4g6h_A 107 KKGNVTYYEA-EATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFG---IPGVT-DYG 181 (502)
T ss_dssp CSSCEEEEEE-EEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTT---CTTHH-HHC
T ss_pred hcCCeEEEEE-EEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCC---ccCcc-ccc
Confidence 2347889887 899999999988652 3568999999999999998777 56643 355
Q ss_pred EEEeCHHHHHHHHHHHHhc---------------CCCcEEEECCCHHHHHHHHHHHHC--------------CCeEEEEe
Q 013890 143 FYLREIDDADKLVEAIKAK---------------KNGKAVVVGGGYIGLELSAALKIN--------------NIDVSMVY 193 (434)
Q Consensus 143 ~~~~~~~~~~~l~~~l~~~---------------~~~~vvVvG~g~~g~e~a~~l~~~--------------g~~v~~~~ 193 (434)
+.+++..++.++++.+... ...+++|||+|++|+|+|..|.++ ..+|++++
T Consensus 182 ~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve 261 (502)
T 4g6h_A 182 HFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVE 261 (502)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEec
Confidence 7788999998887655211 124799999999999999988764 36899999
Q ss_pred eCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc----EEEcCEEEEccCCccChhh--
Q 013890 194 PEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGR----TLEADIVVVGVGGRPLISL-- 267 (434)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~----~i~~d~vv~a~G~~p~~~~-- 267 (434)
+.+++++. +++++++.+.+.|++.||++++++.|++++. ++.+......||+ ++++|.||||+|.+|+...
T Consensus 262 ~~~~il~~-~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~ 338 (502)
T 4g6h_A 262 ALPIVLNM-FEKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITD 338 (502)
T ss_dssp SSSSSSTT-SCHHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHH
T ss_pred cccccccC-CCHHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHh
Confidence 99999986 8999999999999999999999999999965 5555566667774 6999999999999998532
Q ss_pred -h-hccccc-cCCcEEeCCCCCC-CCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhcc
Q 013890 268 -F-KGQVAE-NKGGIETDDFFKT-SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 332 (434)
Q Consensus 268 -~-~~~~~~-~~g~i~vd~~~~t-~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 332 (434)
. ..+... .+|+|.||++||| ++|||||+|||+..+.. +.+..|.+||+.+|+||.+.
T Consensus 339 l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p--------~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 339 LFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLP--------PTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp HHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSC--------CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCC--------CchHHHHHHHHHHHHHHHHH
Confidence 2 223333 5689999999999 89999999999987654 67888999999999999754
No 54
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=5.7e-40 Score=306.50 Aligned_cols=297 Identities=20% Similarity=0.217 Sum_probs=208.1
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC--CCCCccccccCCCCCCCCCCcceec-CCCCCCCC
Q 013890 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY--ERPALSKAYLFPEGTARLPGFHVCV-GSGGERLL 78 (434)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 78 (434)
|++.|||+||||||||++||.+|+++|++ |+|||++..... ..+..++..+ ..+|++.... +.......
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~---v~liE~~~~gg~~~~G~~~~~~~i-----~~~~g~~~~i~~~~l~~~~ 72 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLK---PVMYEGFMAGGVAAGGQLTTTTII-----ENFPGFPNGIDGNELMMNM 72 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSGGGCCTTCGGGGSSEE-----CCSTTCTTCEEHHHHHHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCcccCCCcCChHHh-----hhccCCcccCCHHHHHHHH
Confidence 55679999999999999999999999987 999999854211 1111111111 2233332110 00011223
Q ss_pred HhHHHHCCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCcccccCCCCCCCC---CCCEEEEeCHHHHHH
Q 013890 79 PEWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADK 153 (434)
Q Consensus 79 ~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~---~~~v~~~~~~~~~~~ 153 (434)
.+...+.++.+... .+.......+ .+.+.++.++.||++|||||++|+.|+. ||.+ ...+..+ .....
T Consensus 73 ~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~i---pG~~~~~~~~~~~~---~~~~~ 145 (314)
T 4a5l_A 73 RTQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHV---PGEDKYWQNGVSAC---AICDG 145 (314)
T ss_dssp HHHHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCC---TTHHHHBTTTEESC---HHHHT
T ss_pred HHHHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCC---Cccccccccceeee---hhhhh
Confidence 34556678888776 5565554433 4566778899999999999999998884 5543 2223322 22111
Q ss_pred HHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEe
Q 013890 154 LVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTT 233 (434)
Q Consensus 154 l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~ 233 (434)
. ....++++++|||+|++|+|+|..|+++|.+|+++++.+.+.. ++.. ..+.....+++.+....+.++..
T Consensus 146 ~---~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~i~~ 216 (314)
T 4a5l_A 146 A---VPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA---SKTM---QERVLNHPKIEVIWNSELVELEG 216 (314)
T ss_dssp T---SGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEEE
T ss_pred h---hhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc---cchh---hhhhhcccceeeEeeeeeEEEEe
Confidence 1 1112578999999999999999999999999999998776543 3332 33455677899999988888876
Q ss_pred cCCCcEEEEEe-----CCCcEEEcCEEEEccCCccChhhhhccccccCCcEEeCCCCCCCCCceEEecccccccccccCc
Q 013890 234 NADGEVNEVKL-----KDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYRE 308 (434)
Q Consensus 234 ~~~g~~~~v~~-----~~g~~i~~d~vv~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~ 308 (434)
. +.....+.+ .+++++++|.|++++|++||++++...+...++++.||+++|||+|+|||+|||++.+.
T Consensus 217 ~-~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~~~~~~~G~iv~~~~~Ts~pgIyA~GDv~~~~~----- 290 (314)
T 4a5l_A 217 D-GDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTEGPKTSVDGVFACGDVCDRVY----- 290 (314)
T ss_dssp S-SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCBTTBCSSTTEEECSTTTCSSC-----
T ss_pred e-eeccceeEEeecccccceeeccccceEecccccChhHhcccceEcCCeeEeCCCCccCCCCEEEEEeccCCcc-----
Confidence 3 333333333 34568999999999999999999987776655556699999999999999999998654
Q ss_pred ccccccHHHHHHHHHHHHHHHhcc
Q 013890 309 MRRVEHVDHARKSAEQAVKTIMAT 332 (434)
Q Consensus 309 ~~~~~~~~~A~~~g~~aa~~i~~~ 332 (434)
.++..|..+|+.||.++..-
T Consensus 291 ----~~~~~A~~~G~~AA~~~~~y 310 (314)
T 4a5l_A 291 ----RQAIVAAGSGCMAALSCEKW 310 (314)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHHHHHHH
Confidence 45777889999999988653
No 55
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=2.6e-39 Score=302.89 Aligned_cols=302 Identities=20% Similarity=0.194 Sum_probs=223.2
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceec-CCCCCCCCH
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLP 79 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 79 (434)
|||+.+||+|||||++|+++|..|++.|++ |+|||+..... .+.........|.+.... .........
T Consensus 1 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (320)
T 1trb_A 1 GTTKHSKLLILGSGPAGYTAAVYAARANLQ---PVLITGMEKGG--------QLTTTTEVENWPGDPNDLTGPLLMERMH 69 (320)
T ss_dssp CCEEEEEEEEECCSHHHHHHHHHHHTTTCC---CEEECCSSTTG--------GGGGCSBCCCSTTCCSSCBHHHHHHHHH
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHCCCc---EEEEccCCCCc--------eEecchhhhhCCCCCCCCCHHHHHHHHH
Confidence 455679999999999999999999999887 99999753211 111111111222221100 000012233
Q ss_pred hHHHHCCcEEEcCCeEEEEeCCCCEEE-cCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHH
Q 013890 80 EWYKEKGIELILSTEIVRADIASKTLL-SATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 80 ~~~~~~~v~~~~~~~v~~i~~~~~~v~-~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l 158 (434)
+++.+.+++++.+ .+..++.+.+.+. ..++.++.||+||+|||+.|..|+.++........++++...... +
T Consensus 70 ~~~~~~~~~~~~~-~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~ 142 (320)
T 1trb_A 70 EHATKFETEIIFD-HINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGF------F 142 (320)
T ss_dssp HHHHHTTCEEECC-CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHHHHGG------G
T ss_pred HHHHHCCCEEEEe-eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEecccCCcc------c
Confidence 4566789999998 4889987665433 456778999999999999988776322211112345443322211 1
Q ss_pred HhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCc
Q 013890 159 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE 238 (434)
Q Consensus 159 ~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~ 238 (434)
..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+. .++.+.+.+.+.+++.||++++++.+.++..+ ++.
T Consensus 143 --~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~ 216 (320)
T 1trb_A 143 --YRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR---AEKILIKRLMDKVENGNIILHTNRTLEEVTGD-QMG 216 (320)
T ss_dssp --GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC---CCHHHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSS
T ss_pred --cCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc---cCHHHHHHHHHhcccCCeEEEcCceeEEEEcC-CCc
Confidence 257899999999999999999999999999999988764 36788888889999999999999999999873 446
Q ss_pred EEEEEeCC----C--cEEEcCEEEEccCCccChhhhhccccccCCcEEeCCCC-----CCCCCceEEecccccccccccC
Q 013890 239 VNEVKLKD----G--RTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFF-----KTSADDVYAVGDVATFPMKLYR 307 (434)
Q Consensus 239 ~~~v~~~~----g--~~i~~d~vv~a~G~~p~~~~~~~~~~~~~g~i~vd~~~-----~t~~~~iya~Gd~~~~~~~~~~ 307 (434)
+..|.+.+ | +++++|.||+|+|++|++++++.++..++|+|.||+++ +|++|+|||+|||+..+.
T Consensus 217 v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~~~l~~~~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~---- 292 (320)
T 1trb_A 217 VTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIY---- 292 (320)
T ss_dssp EEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGTTTSCEETTEECCCCSSSSCTTBCSSTTEEECGGGGCSSS----
T ss_pred eEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhcccccccCceEEECCCcccccccCCCCCEEEcccccCCcc----
Confidence 66677654 4 57999999999999999998875555567899999987 899999999999998642
Q ss_pred cccccccHHHHHHHHHHHHHHHhccCCC
Q 013890 308 EMRRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 308 ~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
..+..|..+|+.||.+|...+.+
T Consensus 293 -----~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 293 -----RQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHTC
T ss_pred -----hhhhhhhccHHHHHHHHHHHHHh
Confidence 46788999999999999876644
No 56
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=8.7e-39 Score=304.29 Aligned_cols=304 Identities=21% Similarity=0.290 Sum_probs=220.8
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCC-CCCCCCCcceecCCCCCCCCHhH
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPE-GTARLPGFHVCVGSGGERLLPEW 81 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 81 (434)
++++||+|||||++|+++|..|++.|++ |+|||+.+....... .+.+. .....+.+...........+.+.
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gg~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 83 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNIS---CRIIESMPQLGGQLA-----ALYPEKHIYDVAGFPEVPAIDLVESLWAQ 83 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHH-----HTCTTSEECCSTTCSSEEHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCCCCCccc-----ccCCCcccccCCCCCCCCHHHHHHHHHHH
Confidence 3468999999999999999999999887 999999865321100 00000 00111111100000001123344
Q ss_pred HHHCCcEEEcCCeEEEEeCCCC---EEEcCCCcEEEeceEEEccCCCcccccCCCCCC-C---CCCCEEEE-eCHHHHHH
Q 013890 82 YKEKGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGSTVLRLTDFGVEG-A---DAKNIFYL-REIDDADK 153 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g-~---~~~~v~~~-~~~~~~~~ 153 (434)
+.+.+++++.+++|+.++...+ .|.+.++.++.||+||+|||+.+..|..++++| . ....+++. .+..
T Consensus 84 ~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~---- 159 (360)
T 3ab1_A 84 AERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVE---- 159 (360)
T ss_dssp HHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGG----
T ss_pred HHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHH----
Confidence 5567899999989999987654 577777888999999999999433332222454 2 22334432 2221
Q ss_pred HHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEe
Q 013890 154 LVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTT 233 (434)
Q Consensus 154 l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~ 233 (434)
...+++++|||+|++|+|+|..|.+.+.+|+++.+.+.+.+ .+...+.+.+.+++.||++++++.+.++..
T Consensus 160 ------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~ 230 (360)
T 3ab1_A 160 ------DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG---HGKTAHEVERARANGTIDVYLETEVASIEE 230 (360)
T ss_dssp ------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS---CSHHHHSSHHHHHHTSEEEESSEEEEEEEE
T ss_pred ------HcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC---CHHHHHHHHHHhhcCceEEEcCcCHHHhcc
Confidence 12578999999999999999999999999999999887765 245677788888999999999999999987
Q ss_pred cCCCcEEEEEeC--CC--cEEEcCEEEEccCCccChhhhhc-cccccCCcEEeCCCCCCCCCceEEecccccccccccCc
Q 013890 234 NADGEVNEVKLK--DG--RTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYRE 308 (434)
Q Consensus 234 ~~~g~~~~v~~~--~g--~~i~~d~vv~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~ 308 (434)
+++.+..|.+. +| +++++|.||+|+|++|+.+++.. ++..++|+|.||+++||++|+|||+|||+..+..
T Consensus 231 -~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~---- 305 (360)
T 3ab1_A 231 -SNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENALVVDSHMKTSVDGLYAAGDIAYYPGK---- 305 (360)
T ss_dssp -ETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETTEEECCTTSBCSSTTEEECSTTEECTTC----
T ss_pred -CCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccCeeeecCCCcCCCCCEEEecCccCCCCc----
Confidence 34555566664 77 57999999999999999987754 4555678999999999999999999999986431
Q ss_pred ccccccHHHHHHHHHHHHHHHhccCCC
Q 013890 309 MRRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 309 ~~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
..++..|..||+.||.+|.+...+
T Consensus 306 ---~~~~~~A~~~g~~aa~~i~~~l~~ 329 (360)
T 3ab1_A 306 ---LKIIQTGLSEATMAVRHSLSYIKP 329 (360)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHSC
T ss_pred ---cceeehhHHHHHHHHHHHHhhcCC
Confidence 267888999999999999877644
No 57
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=3.6e-38 Score=295.75 Aligned_cols=295 Identities=20% Similarity=0.234 Sum_probs=213.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceec-CCCCCCCCHhHH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPEWY 82 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 82 (434)
+++||+|||||++|+++|..|++.|++ |+|||++.. . .. +........++++.... .........+.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~-g-g~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 75 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLS---TLILEKGMP-G-GQ------IAWSEEVENFPGFPEPIAGMELAQRMHQQA 75 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCT-T-GG------GGGCSCBCCSTTCSSCBCHHHHHHHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCc---EEEEeCCCC-C-cc------cccccccccCCCCCCCCCHHHHHHHHHHHH
Confidence 468999999999999999999999987 999999832 1 10 11101111122221000 000012234556
Q ss_pred HHCCcEEEcCCeEEEEeCC--CC---EEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHH
Q 013890 83 KEKGIELILSTEIVRADIA--SK---TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEA 157 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~--~~---~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~ 157 (434)
++.+++++.+ .+..++.+ .+ .+...++.++.||+||+|||+.|..|+.++........++++......
T Consensus 76 ~~~gv~~~~~-~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~------ 148 (325)
T 2q7v_A 76 EKFGAKVEMD-EVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGF------ 148 (325)
T ss_dssp HHTTCEEEEC-CEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGG------
T ss_pred HHcCCEEEee-eEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCCHH------
Confidence 6789999884 89998876 43 566677888999999999999988777433322212345433221111
Q ss_pred HHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCC
Q 013890 158 IKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADG 237 (434)
Q Consensus 158 l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g 237 (434)
...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.. ++.+.+ +.+++.||++++++.++++.. ++
T Consensus 149 --~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~~~---~l~~~~gv~i~~~~~v~~i~~--~~ 218 (325)
T 2q7v_A 149 --FYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---NKVAQA---RAFANPKMKFIWDTAVEEIQG--AD 218 (325)
T ss_dssp --GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---CHHHHH---HHHTCTTEEEECSEEEEEEEE--SS
T ss_pred --HcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---chHHHH---HHHhcCCceEecCCceEEEcc--CC
Confidence 12578999999999999999999999999999999876642 443322 223346999999999999987 45
Q ss_pred cEEEEEeC---CCc--EEEcCEEEEccCCccChhhhhccccc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccc
Q 013890 238 EVNEVKLK---DGR--TLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRR 311 (434)
Q Consensus 238 ~~~~v~~~---~g~--~i~~d~vv~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~ 311 (434)
.+..|.+. +|+ ++++|.||+|+|++|++++++..+.. .+|+|.||+++||++|+|||+|||+..+.
T Consensus 219 ~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~-------- 290 (325)
T 2q7v_A 219 SVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDTVSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIY-------- 290 (325)
T ss_dssp SEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCBTTTBCSSTTEEECSTTTCSSC--------
T ss_pred cEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhhcccCCCccEecCCCCccCCCCEEEeecccCccH--------
Confidence 55566664 675 78999999999999999888655544 56899999999999999999999997632
Q ss_pred cccHHHHHHHHHHHHHHHhccCCC
Q 013890 312 VEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 312 ~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
..+..|..||+.||.||...+.+
T Consensus 291 -~~~~~A~~~g~~aa~~i~~~l~~ 313 (325)
T 2q7v_A 291 -RQLATSVGAGTRAAMMTERQLAA 313 (325)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56888999999999999876543
No 58
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.7e-38 Score=295.79 Aligned_cols=296 Identities=23% Similarity=0.233 Sum_probs=212.9
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhH
Q 013890 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEW 81 (434)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (434)
|+..+||+|||||++|+++|..|++.|++ |+|||+..... . +........+|++....+........+.
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFS---VAILDKAVAGG--L------TAEAPLVENYLGFKSIVGSELAKLFADH 81 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSTTG--G------GGGCSCBCCBTTBSSBCHHHHHHHHHHH
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCCCc--c------ccccchhhhcCCCcccCHHHHHHHHHHH
Confidence 33468999999999999999999999987 99999963211 0 0000111112222000000001123344
Q ss_pred HHHCCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHH
Q 013890 82 YKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIK 159 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~ 159 (434)
+++.+++++. .++..++.+.+ .|.+ ++.++.||++|+|||+.|..|+.++........++........
T Consensus 82 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~-------- 151 (319)
T 3cty_A 82 AANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGY-------- 151 (319)
T ss_dssp HHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGG--------
T ss_pred HHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecchh--------
Confidence 5567899988 58999987666 4554 5668999999999999988777433221112345433222111
Q ss_pred hcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcE
Q 013890 160 AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEV 239 (434)
Q Consensus 160 ~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~ 239 (434)
...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.. ++. +.+.+++.||++++++++.++.. +++++
T Consensus 152 ~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~~~----l~~~l~~~gv~i~~~~~v~~i~~-~~~~v 223 (319)
T 3cty_A 152 LFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC---ENA----YVQEIKKRNIPYIMNAQVTEIVG-DGKKV 223 (319)
T ss_dssp GGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS---CHH----HHHHHHHTTCCEECSEEEEEEEE-SSSSE
T ss_pred hcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC---CHH----HHHHHhcCCcEEEcCCeEEEEec-CCceE
Confidence 12578999999999999999999999999999998876642 343 34556688999999999999987 34545
Q ss_pred EEEEeC---CCc--EEEcCEEEEccCCccChhhhhc-cccc-cCCcEEeCCCCCCCCCceEEecccccccccccCccccc
Q 013890 240 NEVKLK---DGR--TLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRV 312 (434)
Q Consensus 240 ~~v~~~---~g~--~i~~d~vv~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~ 312 (434)
..+.+. +|+ ++++|.||+|+|++|+++++.. ++.. .+|+|.||+++||+.|+|||+|||+..+.
T Consensus 224 ~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~--------- 294 (319)
T 3cty_A 224 TGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNF--------- 294 (319)
T ss_dssp EEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC---------
T ss_pred EEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCccCCCCEEEeecccCcch---------
Confidence 566664 665 6899999999999999988754 4655 56899999999999999999999998632
Q ss_pred ccHHHHHHHHHHHHHHHhccCCC
Q 013890 313 EHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 313 ~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
.++..|..||+.||.||...+.+
T Consensus 295 ~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 295 AQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHHHHHHhhc
Confidence 56888999999999999876543
No 59
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=4.9e-38 Score=292.90 Aligned_cols=293 Identities=19% Similarity=0.228 Sum_probs=212.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
++||+|||||++|+++|..|++.|++ |+|||+.....+ ........++.............+.+.+++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~---v~li~~~~gG~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIR---TGLMGERFGGQI---------LDTVDIENYISVPKTEGQKLAGALKVHVDE 68 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSTTGGG---------GGCCEECCBTTBSSEEHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCcee---------ccccccccccCcCCCCHHHHHHHHHHHHHH
Confidence 37999999999999999999999887 999986421111 000000011110000000001233455567
Q ss_pred CCcEEEcCCeEEEEeCC-----CCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHH
Q 013890 85 KGIELILSTEIVRADIA-----SKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIK 159 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~-----~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~ 159 (434)
.+++++.++++..++++ ...+.+.++.++.||++|+|||+.|..|+.++........++++... ...
T Consensus 69 ~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~------~~~-- 140 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHC------DGP-- 140 (310)
T ss_dssp SCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHH------HGG--
T ss_pred cCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccC------cHh--
Confidence 89999999899999865 23577778888999999999999988777443332223445533211 111
Q ss_pred hcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHH-cCcEEEcCCeEEEEEecCCCc
Q 013890 160 AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGE 238 (434)
Q Consensus 160 ~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gV~~~~~~~v~~i~~~~~g~ 238 (434)
...+++++|||+|++|+|+|..|.+.+.+|+++++.+.+. +++. +.+.+++ .||++++++.++++.. ++++
T Consensus 141 ~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~----~~~~l~~~~gv~v~~~~~v~~i~~-~~~~ 212 (310)
T 1fl2_A 141 LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---ADQV----LQDKLRSLKNVDIILNAQTTEVKG-DGSK 212 (310)
T ss_dssp GGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SCHH----HHHHHHTCTTEEEESSEEEEEEEE-SSSS
T ss_pred hcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---ccHH----HHHHHhhCCCeEEecCCceEEEEc-CCCc
Confidence 1257899999999999999999999999999999988763 3443 4455666 6999999999999987 3456
Q ss_pred EEEEEeCC---Cc--EEEcCEEEEccCCccChhhhhccccc-cCCcEEeCCCCCCCCCceEEecccccccccccCccccc
Q 013890 239 VNEVKLKD---GR--TLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRV 312 (434)
Q Consensus 239 ~~~v~~~~---g~--~i~~d~vv~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~ 312 (434)
+..+.+.+ |+ ++++|.|++|+|++|+++++...+.. .+|+|.||+++||+.|+|||+|||+..+.
T Consensus 213 v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~--------- 283 (310)
T 1fl2_A 213 VVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPY--------- 283 (310)
T ss_dssp EEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCBCSSTTEEECSTTBSCSS---------
T ss_pred EEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhccccccCCCcEEcCCCCccCCCCEEEeecccCCcc---------
Confidence 65666643 53 68999999999999999888655555 56899999999999999999999998653
Q ss_pred ccHHHHHHHHHHHHHHHhccCC
Q 013890 313 EHVDHARKSAEQAVKTIMATEG 334 (434)
Q Consensus 313 ~~~~~A~~~g~~aa~~i~~~~~ 334 (434)
..+..|..+|+.||.+|...+.
T Consensus 284 ~~~~~A~~~g~~aa~~i~~~l~ 305 (310)
T 1fl2_A 284 KQIIIATGEGAKASLSAFDYLI 305 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhHHHHHHHHHHHHH
Confidence 4677899999999999987543
No 60
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.3e-38 Score=299.63 Aligned_cols=302 Identities=18% Similarity=0.210 Sum_probs=218.3
Q ss_pred CCC--CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCC
Q 013890 1 MAE--KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLL 78 (434)
Q Consensus 1 Mm~--~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (434)
||+ +++||+|||||+||+++|..|++.|++ |+|||+++...... ............+++............
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gG~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQAS---VKIIESLPQLGGQL----SALYPEKYIYDVAGFPKIRAQELINNL 73 (332)
T ss_dssp CEEEEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHH----HHHCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CCCCCccceEEEECCCHHHHHHHHHHHHCCCC---EEEEEcCCCCCcee----hhcCCCceEeccCCCCCCCHHHHHHHH
Confidence 553 358999999999999999999999887 99999987532100 000000001112222111000111233
Q ss_pred HhHHHHCCcEEEcCCeEEEEeCCCC---EEEcCCCcEEEeceEEEccCC---CcccccCCCCCCCCCCCEEEEeCHHHHH
Q 013890 79 PEWYKEKGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGS---TVLRLTDFGVEGADAKNIFYLREIDDAD 152 (434)
Q Consensus 79 ~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~lilAtG~---~~~~p~~~~i~g~~~~~v~~~~~~~~~~ 152 (434)
.+.+++.+++++.+++|+.++...+ .+.+.+++ +.||+||+|||+ .|..|+.++........+++ .+.+..
T Consensus 74 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~--~~~~~~ 150 (332)
T 3lzw_A 74 KEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY--FVDDLQ 150 (332)
T ss_dssp HHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES--SCSCGG
T ss_pred HHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE--ecCCHH
Confidence 4455567899999999999998776 67776665 999999999999 77766643322211234443 222222
Q ss_pred HHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEE
Q 013890 153 KLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 153 ~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~ 232 (434)
.+ ++++++|||+|.+|+|+|..|.+.+.+|+++.+.+.+.+ .+.. .+.+++.||+++.++.+.++.
T Consensus 151 ~~-------~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~--~~~~-----~~~l~~~gv~~~~~~~v~~i~ 216 (332)
T 3lzw_A 151 KF-------AGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA--HEHS-----VENLHASKVNVLTPFVPAELI 216 (332)
T ss_dssp GG-------BTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS--CHHH-----HHHHHHSSCEEETTEEEEEEE
T ss_pred Hc-------CCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc--cHHH-----HHHHhcCCeEEEeCceeeEEe
Confidence 21 578999999999999999999999999999999887754 2322 244788999999999999998
Q ss_pred ecCCCcEEEEEeCC-----CcEEEcCEEEEccCCccChhhhhc-cccccCCcEEeCCCCCCCCCceEEeccccccccccc
Q 013890 233 TNADGEVNEVKLKD-----GRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLY 306 (434)
Q Consensus 233 ~~~~g~~~~v~~~~-----g~~i~~d~vv~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~ 306 (434)
.+++ ...+.+.+ ++++++|.||+|+|++|+.+++.. ++..++|+|.||+++||+.|+|||+|||+..+..
T Consensus 217 ~~~~--~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~-- 292 (332)
T 3lzw_A 217 GEDK--IEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTYEGK-- 292 (332)
T ss_dssp CSSS--CCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETTEEECCTTSBCSSTTEEECGGGEECTTC--
T ss_pred cCCc--eEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCCeEEeCCCCceecCCEEEccceecCCCC--
Confidence 7322 44566654 457999999999999999987754 5556789999999999999999999999975421
Q ss_pred CcccccccHHHHHHHHHHHHHHHhccCCC
Q 013890 307 REMRRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 307 ~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
...+..|..||+.||.+|.....+
T Consensus 293 -----~~~~~~A~~~g~~aa~~i~~~l~~ 316 (332)
T 3lzw_A 293 -----VNLIASGFGEAPTAVNNAKAYMDP 316 (332)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred -----cceEeeehhhHHHHHHHHHHhhCh
Confidence 167889999999999999887654
No 61
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=2.7e-38 Score=294.80 Aligned_cols=288 Identities=19% Similarity=0.191 Sum_probs=211.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecC-CCCCCCCHhHHH
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVG-SGGERLLPEWYK 83 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~-~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 83 (434)
+||+|||||++|+++|..|++.|+ + |+|||++..... +........+|++..... ........+.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~---v~lie~~~~gg~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 70 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKN---AVLFEKGMPGGQ--------ITGSSEIENYPGVKEVVSGLDFMQPWQEQCF 70 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSS---EEEECSSSTTCG--------GGGCSCBCCSTTCCSCBCHHHHHHHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCc---EEEEcCCCCCcc--------cccccccccCCCCcccCCHHHHHHHHHHHHH
Confidence 799999999999999999999988 6 999999632110 010111111222110000 000112334455
Q ss_pred HCCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCcccccCCCCCCCC---CCCEEEEeCHHHHHHHHHHH
Q 013890 84 EKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~---~~~v~~~~~~~~~~~l~~~l 158 (434)
+.+++++. .++..++.+.+ .+.+.++.++.||++|+|||+.|..|+. +|.+ ...++++......
T Consensus 71 ~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~---~g~~~~~~~~~~~~~~~~~~------- 139 (311)
T 2q0l_A 71 RFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGI---KGESEYWGKGVSTCATCDGF------- 139 (311)
T ss_dssp TTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCCC---BTHHHHBTTTEESCHHHHGG-------
T ss_pred HcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCC---CChhhccCCcEEEeecCChh-------
Confidence 67899988 68999987766 5666778889999999999999888774 4432 2445543322211
Q ss_pred HhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHH-HcCcEEEcCCeEEEEEecCCC
Q 013890 159 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYA-NKGIKIIKGTVAVGFTTNADG 237 (434)
Q Consensus 159 ~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gV~~~~~~~v~~i~~~~~g 237 (434)
...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+. .++.+. +.+. +.||++++++.+.++..+ ++
T Consensus 140 -~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~~~----~~l~~~~gv~v~~~~~v~~i~~~-~~ 210 (311)
T 2q0l_A 140 -FYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR---CAPITL----EHAKNNDKIEFLTPYVVEEIKGD-AS 210 (311)
T ss_dssp -GGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC---SCHHHH----HHHHTCTTEEEETTEEEEEEEEE-TT
T ss_pred -hcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC---CCHHHH----HHHhhCCCeEEEeCCEEEEEECC-CC
Confidence 1257899999999999999999999999999999988763 344433 3344 479999999999999873 34
Q ss_pred cEEEEEeC---CCc--EEEcCEEEEccCCccChhhhhcc-----ccc-cCCcEEeCCCCCCCCCceEEeccccccccccc
Q 013890 238 EVNEVKLK---DGR--TLEADIVVVGVGGRPLISLFKGQ-----VAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLY 306 (434)
Q Consensus 238 ~~~~v~~~---~g~--~i~~d~vv~a~G~~p~~~~~~~~-----~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~ 306 (434)
.+..+.+. +|+ ++++|.|++|+|++|++++++.. +.. .+|+|.||+++||+.|+|||+|||+..+.
T Consensus 211 ~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~--- 287 (311)
T 2q0l_A 211 GVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP--- 287 (311)
T ss_dssp EEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC---
T ss_pred cEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCccccCCCCeEEcccccCcch---
Confidence 44456665 675 78999999999999999887643 555 56899999999999999999999998632
Q ss_pred CcccccccHHHHHHHHHHHHHHHhccC
Q 013890 307 REMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 307 ~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
.++..|..||+.||.||...+
T Consensus 288 ------~~~~~A~~~g~~aa~~i~~~l 308 (311)
T 2q0l_A 288 ------KQVVCAASDGATAALSVISYL 308 (311)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHhHHHHHHHHHHHH
Confidence 578889999999999997643
No 62
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=1.5e-38 Score=300.03 Aligned_cols=302 Identities=22% Similarity=0.196 Sum_probs=217.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCccee-cCCCCCCCCHhHH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVC-VGSGGERLLPEWY 82 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 82 (434)
+++||+|||||++|+++|..|+++|++ |+|||+.+..... +...+........+|++... ........+.+.+
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~vie~~~~~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIK---PILYEGMMANGIA---AGGQLTTTTEIENFPGFPDGLTGSELMDRMREQS 94 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSBTTBC---TTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCCCCCCC---cCcccccchhhcccCCCcccCCHHHHHHHHHHHH
Confidence 468999999999999999999999987 9999997521111 11111111111222222110 0001112344566
Q ss_pred HHCCcEEEcCCeEEEEeCCCCEEEc-----CCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHH
Q 013890 83 KEKGIELILSTEIVRADIASKTLLS-----ATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEA 157 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~-----~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~ 157 (434)
.+.+++++.++ +..++.+.+.+.+ .++..+.||++|+|||+.|..|+.++........++++.... ..
T Consensus 95 ~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~------~~ 167 (338)
T 3itj_A 95 TKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCD------GA 167 (338)
T ss_dssp HHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHH------TT
T ss_pred HHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEchhcc------cc
Confidence 67899999986 9999988775544 366789999999999999887774322111123444322111 11
Q ss_pred HHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHc-CcEEEcCCeEEEEEecCC
Q 013890 158 IKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANK-GIKIIKGTVAVGFTTNAD 236 (434)
Q Consensus 158 l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gV~~~~~~~v~~i~~~~~ 236 (434)
+....+++++|||+|++|+|+|..|.+.|.+|+++.+.+.+.+ ...+.+.+.+. ||++++++.+.++.. ++
T Consensus 168 ~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------~~~~~~~l~~~~gv~i~~~~~v~~i~~-~~ 239 (338)
T 3itj_A 168 VPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------STIMQKRAEKNEKIEILYNTVALEAKG-DG 239 (338)
T ss_dssp SGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHHHHHHHHHCTTEEEECSEEEEEEEE-SS
T ss_pred hhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------CHHHHHHHHhcCCeEEeecceeEEEEc-cc
Confidence 1122588999999999999999999999999999999887664 23344555554 999999999999987 34
Q ss_pred CcEEEEEeCC-----CcEEEcCEEEEccCCccChhhhhccccc-cCCcEEe-CCCCCCCCCceEEecccccccccccCcc
Q 013890 237 GEVNEVKLKD-----GRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIET-DDFFKTSADDVYAVGDVATFPMKLYREM 309 (434)
Q Consensus 237 g~~~~v~~~~-----g~~i~~d~vv~a~G~~p~~~~~~~~~~~-~~g~i~v-d~~~~t~~~~iya~Gd~~~~~~~~~~~~ 309 (434)
+.+..|.+.+ ++++++|.||+|+|++|+..++..++.. .+|++.| |++++|+.|+|||+|||+..+.
T Consensus 240 ~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~------ 313 (338)
T 3itj_A 240 KLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKY------ 313 (338)
T ss_dssp SSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBTTBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSC------
T ss_pred CcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhCceEecCCCcEEEcCcccccCCCCEEEeeccCCCCc------
Confidence 5566677765 4679999999999999999988777766 5788884 8899999999999999997432
Q ss_pred cccccHHHHHHHHHHHHHHHhccCCC
Q 013890 310 RRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 310 ~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
+.+..|..+|+.||.+|...+.+
T Consensus 314 ---~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 314 ---RQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ---cceeeehhhhHHHHHHHHHHHhc
Confidence 56888999999999999876543
No 63
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=7.9e-38 Score=293.05 Aligned_cols=294 Identities=19% Similarity=0.200 Sum_probs=215.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
++||+|||||+||+++|..|+++|++ |+|||++ ... .+........+|.+...........+.+.+++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~-~gg--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLK---TLVIGET-PGG--------QLTEAGIVDDYLGLIEIQASDMIKVFNKHIEK 82 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS-TTG--------GGGGCCEECCSTTSTTEEHHHHHHHHHHHHHT
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCc---EEEEecc-CCC--------eecccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence 48999999999999999999999987 9999998 211 01111111122222111111111233455666
Q ss_pred CCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcC
Q 013890 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~ 162 (434)
.+++++. .+|+.++.+.+ .+.+.++.++.||+||+|||+.|..|+.++........+++.. ..+. ....
T Consensus 83 ~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~-~~~~-------~~~~ 153 (323)
T 3f8d_A 83 YEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCS-VADA-------PLFK 153 (323)
T ss_dssp TTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCH-HHHG-------GGGT
T ss_pred cCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEec-cCCH-------hHcC
Confidence 7999998 79999987754 4667777899999999999999988874333222225554322 1111 1125
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEV 242 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v 242 (434)
+++++|+|+|++|+|+|..|.+.|.+|+++++.+.+.+ ++++ +.+.+++.||+++.++.+.++.. ++.+..+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~~---~~~~~~~~gv~~~~~~~v~~i~~--~~~~~~v 225 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QPIY---VETVKKKPNVEFVLNSVVKEIKG--DKVVKQV 225 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEEE--SSSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---CHHH---HHHHHhCCCcEEEeCCEEEEEec--cCceeEE
Confidence 78999999999999999999999999999999988775 3332 33334455999999999999987 4556667
Q ss_pred EeCC---Cc--EEEcCEEEEccCCccChhhhhc-cccc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccccccH
Q 013890 243 KLKD---GR--TLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHV 315 (434)
Q Consensus 243 ~~~~---g~--~i~~d~vv~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~ 315 (434)
.+.+ |+ ++++|.|++|+|++|++++++. ++.. .+|+|.||+++||+.|+|||+|||+..+. ..+.+
T Consensus 226 ~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~-------~~~~~ 298 (323)
T 3f8d_A 226 VVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWL-------GFRQV 298 (323)
T ss_dssp EEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBSTTT-------TCCCH
T ss_pred EEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCceecCCCEEEcceecCCCC-------cccce
Confidence 7765 76 7999999999999999887754 5665 67899999999999999999999998630 12678
Q ss_pred HHHHHHHHHHHHHHhccCC
Q 013890 316 DHARKSAEQAVKTIMATEG 334 (434)
Q Consensus 316 ~~A~~~g~~aa~~i~~~~~ 334 (434)
..|..||+.||.+|.....
T Consensus 299 ~~A~~~g~~aa~~i~~~l~ 317 (323)
T 3f8d_A 299 ITAVAQGAVAATSAYRYVT 317 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred eehhhHHHHHHHHHHHHHH
Confidence 8999999999999986543
No 64
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=7.2e-38 Score=292.29 Aligned_cols=292 Identities=18% Similarity=0.140 Sum_probs=211.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEE-EeCCCCCCCCCCCccccccCCCCCCCCCCcceec-CCCCCCCCHhH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAI-ISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPEW 81 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~v-ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 81 (434)
+++||+|||||+||++||..|+++|++ |+| +|++.. . ..+........+|++.... .........++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~li~e~~~~-g-------G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLK---NVVMFEKGMP-G-------GQITSSSEIENYPGVAQVMDGISFMAPWSEQ 71 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCS---CEEEECSSST-T-------GGGGGCSCBCCSTTCCSCBCHHHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCC---eEEEEeCCCC-C-------ceeeeeceeccCCCCCCCCCHHHHHHHHHHH
Confidence 468999999999999999999999987 888 999532 1 0011111112223221000 00011233455
Q ss_pred HHHCCcEEEcCCeEEEEeCCC--CEEE--c-CCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHH
Q 013890 82 YKEKGIELILSTEIVRADIAS--KTLL--S-ATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVE 156 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~--~~v~--~-~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~ 156 (434)
+++.+++++.+ .+..+ .+. +.+. + .++ ++.||++|+|||+.|..|+.++........++++......
T Consensus 72 ~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~----- 143 (315)
T 3r9u_A 72 CMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGF----- 143 (315)
T ss_dssp HTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGG-----
T ss_pred HHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeeccccc-----
Confidence 56679999998 88888 444 3322 3 334 8999999999999988887433332222455543222111
Q ss_pred HHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCC
Q 013890 157 AIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 236 (434)
Q Consensus 157 ~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~ 236 (434)
...+++++|+|+|++|+|+|..|.+.+.+|+++++.+.+.. ++++ +.+.+++.||++++++.+.++.. ++
T Consensus 144 ---~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~~---~~~~~~~~gv~~~~~~~v~~i~~-~~ 213 (315)
T 3r9u_A 144 ---FYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA---APST---VEKVKKNEKIELITSASVDEVYG-DK 213 (315)
T ss_dssp ---GGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS---CHHH---HHHHHHCTTEEEECSCEEEEEEE-ET
T ss_pred ---ccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC---CHHH---HHHHHhcCCeEEEeCcEEEEEEc-CC
Confidence 12578999999999999999999999999999999887632 4443 34455788999999999999987 34
Q ss_pred CcEEEEEeC--CCc--EEEcCEEEEccCCccChhhhhc-----cccc-cCCcEEeCCCCCCCCCceEEeccccccccccc
Q 013890 237 GEVNEVKLK--DGR--TLEADIVVVGVGGRPLISLFKG-----QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLY 306 (434)
Q Consensus 237 g~~~~v~~~--~g~--~i~~d~vv~a~G~~p~~~~~~~-----~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~ 306 (434)
+.+..+.+. +|+ ++++|.||+|+|++|+..++.. ++.. .+|+|.||+++||++|+|||+|||+..+.
T Consensus 214 ~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~~--- 290 (315)
T 3r9u_A 214 MGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAP--- 290 (315)
T ss_dssp TEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTCC---
T ss_pred CcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCch---
Confidence 455566665 775 7999999999999999998865 3665 56899999999999999999999996432
Q ss_pred CcccccccHHHHHHHHHHHHHHHhccC
Q 013890 307 REMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 307 ~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
+.+..|..||+.||.+|...+
T Consensus 291 ------~~~~~A~~~g~~aa~~i~~~l 311 (315)
T 3r9u_A 291 ------KQVICAAGDGAVAALSAMAYI 311 (315)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHH
T ss_pred ------hhhhhHHhhHHHHHHHHHHHH
Confidence 578889999999999998654
No 65
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=3.6e-38 Score=292.81 Aligned_cols=286 Identities=14% Similarity=0.089 Sum_probs=198.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCC---CCCCH
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGG---ERLLP 79 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 79 (434)
|+.|||+||||||||++||.+|+++|++ |+|||++.... .+. ...|++....+... .....
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~---v~lie~~~~gg---------~~~----~~~~~~~~~~~~~~~~~~~~~~ 67 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQ---IALFDNNTNRN---------RVT----QNSHGFITRDGIKPEEFKEIGL 67 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSCCGG---------GGS----SCBCCSTTCTTBCHHHHHHHHH
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCC---------eee----eecCCccCCCCCCHHHHHHHHH
Confidence 4579999999999999999999999987 99999974311 010 01111110000000 00111
Q ss_pred hHHHHC-CcEEEcCCeEEEEeCC---CCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHH
Q 013890 80 EWYKEK-GIELILSTEIVRADIA---SKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLV 155 (434)
Q Consensus 80 ~~~~~~-~v~~~~~~~v~~i~~~---~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~ 155 (434)
+.+.++ .+.+... .+..+... ..++.+.+++++.||+||||||++|+.|+++|........++++......
T Consensus 68 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~---- 142 (304)
T 4fk1_A 68 NEVMKYPSVHYYEK-TVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGW---- 142 (304)
T ss_dssp HHHTTSTTEEEEEC-CEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSG----
T ss_pred HHHHhcCCEEEEee-EEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccccchh----
Confidence 122233 4556555 45544432 23677888999999999999999999888533222223455543222111
Q ss_pred HHHHhcCCCcEEEECCCH-HHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEec
Q 013890 156 EAIKAKKNGKAVVVGGGY-IGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN 234 (434)
Q Consensus 156 ~~l~~~~~~~vvVvG~g~-~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~ 234 (434)
..++++++|||+|. .++|+|..+.+.+.+|+++.+.+.+. +.+.+.+++.|++++.++ +..+..
T Consensus 143 ----~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~---------~~~~~~l~~~g~~~~~~~-v~~~~~- 207 (304)
T 4fk1_A 143 ----ELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS---------QTIMDELSNKNIPVITES-IRTLQG- 207 (304)
T ss_dssp ----GGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC---------HHHHHHHHTTTCCEECSC-EEEEES-
T ss_pred ----HhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccch---------hhhhhhhhccceeEeeee-EEEeec-
Confidence 12567888888886 56789999999999999998765432 234567788999999764 677765
Q ss_pred CCCcEEEEEeCCCcEEEcCEEEEccCCccChhhh-hccccc-cCCcEEeCCCCCCCCCceEEecccccccccccCccccc
Q 013890 235 ADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLF-KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRV 312 (434)
Q Consensus 235 ~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~-~~~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~ 312 (434)
+++.+..+.+++|+++++|.+++++|.+|+..++ ..++.+ ++|+|.||+++|||+|+|||+|||++.+.
T Consensus 208 ~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~--------- 278 (304)
T 4fk1_A 208 EGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGP--------- 278 (304)
T ss_dssp GGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHHTSC---------
T ss_pred CCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCccCCCCEEEEeccCCCcc---------
Confidence 4566778999999999999988888766665554 557777 67889999999999999999999997543
Q ss_pred ccHHHHHHHHHHHHHHHhccC
Q 013890 313 EHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 313 ~~~~~A~~~g~~aa~~i~~~~ 333 (434)
.++..|..+|+.||.+|...+
T Consensus 279 ~~~~~A~~~G~~AA~~i~~~L 299 (304)
T 4fk1_A 279 SSLIIAASQGNKAAIAINSDI 299 (304)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 457789999999999886543
No 66
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=5.4e-38 Score=303.11 Aligned_cols=319 Identities=19% Similarity=0.165 Sum_probs=236.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHHC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
++|||||||+||++||.+|++.+. ..+|+|||+++.+.+. + ++......... .. ......+.+.+.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~-~~~Vtlie~~~~~~~~-p-~~~~v~~g~~~--~~---------~~~~~~~~~~~~ 68 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADP-SIEVTLIEPNETYYTC-Y-MSNEVIGGDRE--LA---------SLRVGYDGLRAH 68 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSCSSEECS-T-THHHHHHTSSC--GG---------GGEECSHHHHHT
T ss_pred CEEEEECCcHHHHHHHHHHHhcCc-CCeEEEEeCCCCCCCc-c-CHHHHhcCCCC--HH---------HHhhCHHHHHHC
Confidence 689999999999999999999874 4679999999753321 2 21111111100 00 011233556678
Q ss_pred CcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCC-CCCCEEEEeCHHHHHHHHHHHHhcCCC
Q 013890 86 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGA-DAKNIFYLREIDDADKLVEAIKAKKNG 164 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~-~~~~v~~~~~~~~~~~l~~~l~~~~~~ 164 (434)
+++++.+ +|+.||++.+.+.+.++.++.||+||+|||+++..++++|+... ....++.+.+.+++..+.+.+......
T Consensus 69 gv~~i~~-~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (401)
T 3vrd_B 69 GIQVVHD-SALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDG 147 (401)
T ss_dssp TCEEECS-CEEEEETTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTT
T ss_pred CCEEEEe-EEEEEEccCcEEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccC
Confidence 9999987 89999999999999999999999999999999988885443322 134456677888898888888776555
Q ss_pred cEEEECCCH-----------HHHHHHHHHHHCC--CeEEEEeeCCccCC-cccCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 013890 165 KAVVVGGGY-----------IGLELSAALKINN--IDVSMVYPEPWCMP-RLFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 165 ~vvVvG~g~-----------~g~e~a~~l~~~g--~~v~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
+.+|++.+. .+++++..+.+.+ .+|+++++.+.+.. ..+++.+.+.+.+.+++.||++++++.+..
T Consensus 148 ~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~ 227 (401)
T 3vrd_B 148 GVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAV 227 (401)
T ss_dssp CEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCE
T ss_pred CcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEE
Confidence 555554332 3456666666654 68999988876632 125667777777778899999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhhhccccccCCcEEeCCC-CC-CCCCceEEecccccccccccCc
Q 013890 231 FTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDF-FK-TSADDVYAVGDVATFPMKLYRE 308 (434)
Q Consensus 231 i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~~~~~~~g~i~vd~~-~~-t~~~~iya~Gd~~~~~~~~~~~ 308 (434)
++.+.++ ..+.+++|+++++|.+++++|.+|+..+...++..++|+|.||++ +| |++|||||+|||+.....
T Consensus 228 v~~~~~~--~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~---- 301 (401)
T 3vrd_B 228 VKTDTEA--MTVETSFGETFKAAVINLIPPQRAGKIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPM---- 301 (401)
T ss_dssp EEEETTT--TEEEETTSCEEECSEEEECCCEEECHHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTS----
T ss_pred EEecccc--eEEEcCCCcEEEeeEEEEecCcCCchhHhhccccccCCCEEECCCcceecCCCCEEEecccccCCCC----
Confidence 9874444 468899999999999999999999865556677668899999986 66 699999999999864321
Q ss_pred ccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeE
Q 013890 309 MRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFY 348 (434)
Q Consensus 309 ~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~ 348 (434)
+++...|.+||+++|+||++.+.|+++.++.+..+++
T Consensus 302 ---pk~a~~A~~qa~v~A~ni~~~l~G~~~~~~~y~~~~~ 338 (401)
T 3vrd_B 302 ---PKSAYSANSQAKVAAAAVVALLKGEEPGTPSYLNTCY 338 (401)
T ss_dssp ---CBSHHHHHHHHHHHHHHHHHHHHTCCCCCCCEEEEEE
T ss_pred ---CchHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCeEE
Confidence 1678889999999999999887776555555544433
No 67
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=5.8e-37 Score=298.69 Aligned_cols=316 Identities=17% Similarity=0.175 Sum_probs=231.7
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCH
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLP 79 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~---~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (434)
+.++||||||||++|+++|..|++ .+.+ |+|||+++.+.|. +... .+.... .... .....+.
T Consensus 2 ~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~---Vtlie~~~~~~~~-~~~~-~~~~g~--~~~~--------~~~~~l~ 66 (437)
T 3sx6_A 2 RGSAHVVILGAGTGGMPAAYEMKEALGSGHE---VTLISANDYFQFV-PSNP-WVGVGW--KERD--------DIAFPIR 66 (437)
T ss_dssp TTSCEEEEECCSTTHHHHHHHHHHHHGGGSE---EEEECSSSEEECG-GGHH-HHHHTS--SCHH--------HHEEECH
T ss_pred CCCCcEEEECCcHHHHHHHHHHhccCCCcCE---EEEEeCCCCCccc-CCcc-ccccCc--cCHH--------HHHHHHH
Confidence 345899999999999999999999 6665 9999999865442 1110 000000 0000 0023466
Q ss_pred hHHHHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCC--CCEEEEeCHHHHHHHHHH
Q 013890 80 EWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA--KNIFYLREIDDADKLVEA 157 (434)
Q Consensus 80 ~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~--~~v~~~~~~~~~~~l~~~ 157 (434)
+++++.+++++.+ +++.++++.++|.+.+++++.||+||+|||++|..|+ ++|.+. ...+...+..++..+.+.
T Consensus 67 ~~~~~~gv~~~~~-~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~---ipG~~~~~~~~~~~~~~~~a~~~~~~ 142 (437)
T 3sx6_A 67 HYVERKGIHFIAQ-SAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFEN---VPGSDPHEGPVQSICTVDHAERAFAE 142 (437)
T ss_dssp HHHHTTTCEEECS-CEEEEETTTTEEEETTSCEEECSEEEECCCCEECGGG---STTCSTTTSSEECCSSHHHHHHHHHH
T ss_pred HHHHHCCCEEEEe-EEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCccc---CCCCCcccCcceecccccHHHHHHHH
Confidence 7788899999875 9999999999999999989999999999999998887 455543 356677788888887765
Q ss_pred HHhc-CCCcEEEECCCHH----H--HHHH----HHHHHCCCe-----EEEEeeCCccCCccc--CHHHHHHHHHHHHHcC
Q 013890 158 IKAK-KNGKAVVVGGGYI----G--LELS----AALKINNID-----VSMVYPEPWCMPRLF--TADIAAFYEGYYANKG 219 (434)
Q Consensus 158 l~~~-~~~~vvVvG~g~~----g--~e~a----~~l~~~g~~-----v~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g 219 (434)
+... .+++++|||+|+. | +|+| ..+.+.|.+ |+++++.+.+....+ .++....+.+.+++.|
T Consensus 143 ~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~g 222 (437)
T 3sx6_A 143 YQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEG 222 (437)
T ss_dssp HHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTT
T ss_pred HHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCC
Confidence 5432 2446688888554 3 7777 666677875 999999887632111 1357888899999999
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeCC-----CcEEEcCEEEEccCCccChhhhh-ccccccCCcEEeCCCCCC-CCCce
Q 013890 220 IKIIKGTVAVGFTTNADGEVNEVKLKD-----GRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKT-SADDV 292 (434)
Q Consensus 220 V~~~~~~~v~~i~~~~~g~~~~v~~~~-----g~~i~~d~vv~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t-~~~~i 292 (434)
|++++++.|++++. ++........+ ++++++|.+++++|++++..+.+ .++...+|+|.||+++|| ++|||
T Consensus 223 I~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~I 300 (437)
T 3sx6_A 223 IEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANI 300 (437)
T ss_dssp CEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTE
T ss_pred CEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccccCCCCcEEeChhccCCCCCCE
Confidence 99999999999975 33221112233 46799999999999999877665 355447789999999999 99999
Q ss_pred EEecccccccccccCcc---cccccHHHHHHHHHHHHHHHhccCCCCcccC
Q 013890 293 YAVGDVATFPMKLYREM---RRVEHVDHARKSAEQAVKTIMATEGGKTVTG 340 (434)
Q Consensus 293 ya~Gd~~~~~~~~~~~~---~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~ 340 (434)
||+|||+..+... +.+ ..++++..|..||+.+|+||...+.++++..
T Consensus 301 fa~GD~~~~~~~~-~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~ 350 (437)
T 3sx6_A 301 FAAGIAIAIPPVE-TTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQ 350 (437)
T ss_dssp EECGGGBCCCCSC-CCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCC
T ss_pred EEEEEEeccCCcC-CCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999876421 111 0236788999999999999999887765444
No 68
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=7.5e-38 Score=289.68 Aligned_cols=282 Identities=16% Similarity=0.084 Sum_probs=207.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHHC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
+||+|||||++|+++|..|+++|++ |+|||++...... +.. ...++...............+.+.+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKN---ILLVDAGERRNRF-ASH---------SHGFLGQDGKAPGEIIAEARRQIERY 69 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEECCCCGGGG-CSC---------CCSSTTCTTCCHHHHHHHHHHHHTTC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCccccc-chh---------hcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 8999999999999999999999986 9999997531100 000 01111110000000011223334444
Q ss_pred -CcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcC
Q 013890 86 -GIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 86 -~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~ 162 (434)
+++++.+ +|+.++.+.+ .+.+.++.++.||++|+|||+.|..|+.+++.......+++... .+.. ...
T Consensus 70 ~~v~~~~~-~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~-~~~~-------~~~ 140 (297)
T 3fbs_A 70 PTIHWVEG-RVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPY-CHGY-------ELD 140 (297)
T ss_dssp TTEEEEES-CEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHH-HHTG-------GGT
T ss_pred CCeEEEEe-EEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEccc-Ccch-------hhc
Confidence 7888775 8999987654 57777888899999999999999888744333222245554331 1111 125
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEV 242 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v 242 (434)
+++++|+|+|++|+|+|..|.+.| +|+++.+.+.. +++ .+.+.+++.||+++. +.+.++.. ++ .+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~----~~~----~~~~~l~~~gv~i~~-~~v~~i~~--~~---~v 205 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE----PDA----DQHALLAARGVRVET-TRIREIAG--HA---DV 205 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC----CCH----HHHHHHHHTTCEEEC-SCEEEEET--TE---EE
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC----CCH----HHHHHHHHCCcEEEc-ceeeeeec--CC---eE
Confidence 899999999999999999999999 99999887652 333 356778899999996 89999975 32 68
Q ss_pred EeCCCcEEEcCEEEEccCCccChhhhhc-ccccc---CC-cEEeCCCCCCCCCceEEecccccccccccCcccccccHHH
Q 013890 243 KLKDGRTLEADIVVVGVGGRPLISLFKG-QVAEN---KG-GIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDH 317 (434)
Q Consensus 243 ~~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~~---~g-~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~ 317 (434)
.+.+|+++++|.|++|+|++|+.++++. ++..+ .| ++.||++++|++|+|||+|||+..+ ..+..
T Consensus 206 ~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~~----------~~~~~ 275 (297)
T 3fbs_A 206 VLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVARPA----------GSVAL 275 (297)
T ss_dssp EETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGGCTT----------CCHHH
T ss_pred EeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecCCch----------HHHHH
Confidence 8899999999999999999999887654 45543 35 7999999999999999999999864 56888
Q ss_pred HHHHHHHHHHHHhccCC
Q 013890 318 ARKSAEQAVKTIMATEG 334 (434)
Q Consensus 318 A~~~g~~aa~~i~~~~~ 334 (434)
|..||+.||.+|...+.
T Consensus 276 A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 276 AVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHh
Confidence 99999999999987653
No 69
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=2.5e-37 Score=291.08 Aligned_cols=300 Identities=19% Similarity=0.206 Sum_probs=211.8
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceec-CCCCCCCCHhH
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPEW 81 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 81 (434)
++++||+|||||++|+++|..|++.|++ |+|||+...... .....+.........|.+.... .......+.+.
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~---v~lie~~~~~~~---~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELK---PLLFEGWMANDI---APGGQLTTTTDVENFPGFPEGILGVELTDKFRKQ 79 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSBTTB---CTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeccCcccc---CCCceeeeccccccCCCCccCCCHHHHHHHHHHH
Confidence 4468999999999999999999999987 999998211000 0001111111111222221000 00011223345
Q ss_pred HHHCCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCC-------CCEEEEeCHHHHH
Q 013890 82 YKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA-------KNIFYLREIDDAD 152 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~-------~~v~~~~~~~~~~ 152 (434)
+.+.+++++.++ +..++.+.+ +|.+ ++.++.||++|+|||+.|..|+. ++... ..++++....
T Consensus 80 ~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~--- 151 (333)
T 1vdc_A 80 SERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSF---VGSGEVLGGFWNRGISACAVCD--- 151 (333)
T ss_dssp HHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCCC---BTCSSSSSCCBTTTEESCHHHH---
T ss_pred HHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCC---CCccccccccccCcEEEeccCc---
Confidence 567899999985 888887665 5666 77789999999999999887774 44332 2333222111
Q ss_pred HHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEE
Q 013890 153 KLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 153 ~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~ 232 (434)
..+....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.. .+.+. .+.+++.||++++++.+.++.
T Consensus 152 ---~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~~---~~~~~~~gv~i~~~~~v~~i~ 222 (333)
T 1vdc_A 152 ---GAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKIMQ---QRALSNPKIDVIWNSSVVEAY 222 (333)
T ss_dssp ---TTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHHH---HHHHTCTTEEEECSEEEEEEE
T ss_pred ---cchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHHHH---HHHHhCCCeeEecCCceEEEe
Confidence 111112578999999999999999999999999999999876643 33222 244567899999999999998
Q ss_pred ecCCC-cEEEEEeC---CC--cEEEcCEEEEccCCccChhhhhccccc-cCCcEEeCCC-CCCCCCceEEeccccccccc
Q 013890 233 TNADG-EVNEVKLK---DG--RTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDF-FKTSADDVYAVGDVATFPMK 304 (434)
Q Consensus 233 ~~~~g-~~~~v~~~---~g--~~i~~d~vv~a~G~~p~~~~~~~~~~~-~~g~i~vd~~-~~t~~~~iya~Gd~~~~~~~ 304 (434)
.++++ .+..+.+. +| +++++|.||+|+|++|++++++.++.. .+|+|.||++ ++|+.|+|||+|||+..+.
T Consensus 223 ~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~- 301 (333)
T 1vdc_A 223 GDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKY- 301 (333)
T ss_dssp ESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSC-
T ss_pred CCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhhccccccCCCCEEechhhcccCCCCEEEeeeccCCCc-
Confidence 73221 55556654 45 579999999999999999988766665 4789999987 6899999999999998642
Q ss_pred ccCcccccccHHHHHHHHHHHHHHHhccCC
Q 013890 305 LYREMRRVEHVDHARKSAEQAVKTIMATEG 334 (434)
Q Consensus 305 ~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 334 (434)
..+..|..+|+.||.+|...+.
T Consensus 302 --------~~~~~A~~~g~~aa~~i~~~l~ 323 (333)
T 1vdc_A 302 --------RQAITAAGTGCMAALDAEHYLQ 323 (333)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------hhHHHHHHhHHHHHHHHHHHHH
Confidence 4688899999999999987553
No 70
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.6e-36 Score=301.14 Aligned_cols=293 Identities=19% Similarity=0.245 Sum_probs=216.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
..+||+|||||+||+++|.+|++.|++ |+|+|+.....+ ........++.+....+......+.+.++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~---v~lie~~~GG~~---------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIR---TGLMGERFGGQV---------LDTVDIENYISVPKTEGQKLAGALKAHVS 278 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSTTGGG---------TTCSCBCCBTTBSSBCHHHHHHHHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCe---EEEEECCCCCcc---------cccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 368999999999999999999999987 999987421111 10000111111110000001123345566
Q ss_pred HCCcEEEcCCeEEEEeCC-----CCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHH
Q 013890 84 EKGIELILSTEIVRADIA-----SKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~-----~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l 158 (434)
+.+++++.+++|..++++ ...|.+.++.++.||++|+|||+.|..|+.+|........++++......
T Consensus 279 ~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~------- 351 (521)
T 1hyu_A 279 DYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGP------- 351 (521)
T ss_dssp TSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGG-------
T ss_pred HcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchh-------
Confidence 789999999999999864 34677778889999999999999988777544333333456654332211
Q ss_pred HhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHH-cCcEEEcCCeEEEEEecCCC
Q 013890 159 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADG 237 (434)
Q Consensus 159 ~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gV~~~~~~~v~~i~~~~~g 237 (434)
...+++++|||+|++|+|+|..|++.|.+|+++++.+.+.. + ..+.+.+++ .||++++++.++++.. +++
T Consensus 352 -~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~----~~l~~~l~~~~gV~v~~~~~v~~i~~-~~~ 422 (521)
T 1hyu_A 352 -LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVLQDKVRSLKNVDIILNAQTTEVKG-DGS 422 (521)
T ss_dssp -GGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C----HHHHHHHTTCTTEEEECSEEEEEEEE-CSS
T ss_pred -hcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C----HHHHHHHhcCCCcEEEeCCEEEEEEc-CCC
Confidence 12588999999999999999999999999999999887653 3 234556666 6999999999999987 345
Q ss_pred cEEEEEeCC---Cc--EEEcCEEEEccCCccChhhhhccccc-cCCcEEeCCCCCCCCCceEEecccccccccccCcccc
Q 013890 238 EVNEVKLKD---GR--TLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRR 311 (434)
Q Consensus 238 ~~~~v~~~~---g~--~i~~d~vv~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~ 311 (434)
++..+.+.+ |+ ++++|.|++|+|++|+++++...+.. .+|+|.||+++||++|+|||+|||+..+.
T Consensus 423 ~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~~~~~-------- 494 (521)
T 1hyu_A 423 KVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPY-------- 494 (521)
T ss_dssp SEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTTTSCBCTTSCBCCCTTCBCSSTTEEECSTTBCCSS--------
T ss_pred cEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhhhhccCCCCcEEeCCCCCCCCCCEEEeecccCCCc--------
Confidence 665666643 53 68999999999999999888765555 57899999999999999999999998653
Q ss_pred cccHHHHHHHHHHHHHHHhccC
Q 013890 312 VEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 312 ~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
+.+..|..+|+.||.+|...+
T Consensus 495 -~~~~~A~~~g~~aa~~i~~~L 515 (521)
T 1hyu_A 495 -KQIIIATGEGAKASLSAFDYL 515 (521)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHH
T ss_pred -ceeeehHHhHHHHHHHHHHHH
Confidence 568889999999999987643
No 71
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=4.7e-38 Score=305.45 Aligned_cols=309 Identities=17% Similarity=0.166 Sum_probs=220.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHHC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
++|||||||+||++||.+|++.+ ++.+|+|||+++.+.|. |.+..-.........+ .....+++++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~-~~~~VtlI~~~~~~~~~-p~l~~v~~g~~~~~~i-----------~~~~~~~~~~~ 69 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLM-PDLKITLISDRPYFGFT-PAFPHLAMGWRKFEDI-----------SVPLAPLLPKF 69 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC-TTCEEEEECSSSEEECG-GGHHHHHHTCSCGGGS-----------EEESTTTGGGG
T ss_pred CcEEEECCCHHHHHHHHHHhccC-cCCeEEEEcCCCCCccC-ccHHHHhcCCCCHHHh-----------hhcHHHHHHHC
Confidence 57999999999999999999976 35679999999876653 3221100000000000 12344667778
Q ss_pred CcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhc-CCC
Q 013890 86 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAK-KNG 164 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~-~~~ 164 (434)
+++++.+ +|+.||++.++|++.+|+++.||+||||||+++. ++ ++|.. .+.+.+.+.+++.++++.+.+. ..+
T Consensus 70 gv~~i~~-~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~~---i~G~~-e~~~~~~~~~~a~~~~~~l~~~~~~~ 143 (430)
T 3hyw_A 70 NIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-FG---AEGQE-ENSTSICTAEHALETQKKLQELYANP 143 (430)
T ss_dssp TEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-CC---SBTHH-HHSCCCSSHHHHHHHHHHHHHHHHSC
T ss_pred CcEEEEe-EEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc-CC---ccCcc-cCcCCcccHHHHHHHHHHHHhhccCC
Confidence 9999987 8999999999999999999999999999999863 33 45543 3455667888888887776543 234
Q ss_pred cEEEECCCH------HHHHHH----HHHHHCC----CeEEEEeeCCccCC--cccCHHHHHHHHHHHHHcCcEEEcCCeE
Q 013890 165 KAVVVGGGY------IGLELS----AALKINN----IDVSMVYPEPWCMP--RLFTADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 165 ~vvVvG~g~------~g~e~a----~~l~~~g----~~v~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~gV~~~~~~~v 228 (434)
.++|+|++. .+.|++ ..+.+.+ .++++++..+.+.. ....+...+.+.+.++++||++++++.|
T Consensus 144 ~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v 223 (430)
T 3hyw_A 144 GPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAV 223 (430)
T ss_dssp CCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEE
T ss_pred ceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceE
Confidence 455555542 233444 3445554 46888887665422 1245677888999999999999999999
Q ss_pred EEEEecCCCcEEEEEeCCC--cEEEcCEEEEccCCccChhhhhccccc---cCCcEEeCCCCC-CCCCceEEeccccccc
Q 013890 229 VGFTTNADGEVNEVKLKDG--RTLEADIVVVGVGGRPLISLFKGQVAE---NKGGIETDDFFK-TSADDVYAVGDVATFP 302 (434)
Q Consensus 229 ~~i~~~~~g~~~~v~~~~g--~~i~~d~vv~a~G~~p~~~~~~~~~~~---~~g~i~vd~~~~-t~~~~iya~Gd~~~~~ 302 (434)
++++. ++ ..+...+| +++++|.+++++|.+|+..+...+... .+|.|.||++|| |++|||||+|||+..+
T Consensus 224 ~~v~~--~~--~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p 299 (430)
T 3hyw_A 224 KAIEP--DK--VIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIP 299 (430)
T ss_dssp EEECS--SE--EEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCC
T ss_pred EEEeC--Cc--eEEEeeCCCceEeecceEEEeccCCCchHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecC
Confidence 99964 33 23344443 579999999999999987666554333 356799999999 7999999999999876
Q ss_pred ccccCc--ccccccHHHHHHHHHHHHHHHhccCCCCc
Q 013890 303 MKLYRE--MRRVEHVDHARKSAEQAVKTIMATEGGKT 337 (434)
Q Consensus 303 ~~~~~~--~~~~~~~~~A~~~g~~aa~~i~~~~~~~~ 337 (434)
...... ...+++...|.+||+++|+||++...+++
T Consensus 300 ~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~ 336 (430)
T 3hyw_A 300 PIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp CSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 531111 11236778899999999999998877753
No 72
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.3e-37 Score=288.47 Aligned_cols=295 Identities=17% Similarity=0.182 Sum_probs=209.9
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecC-CCCCCCCHhH
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVG-SGGERLLPEW 81 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 81 (434)
++.+||+|||||++|+++|..|++.|++ |+|||+..... .+........+|++..... ........++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 80 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLA---PLVFEGTSFGG--------ALMTTTDVENYPGFRNGITGPELMDEMREQ 80 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCC---CEEECCSSCSC--------GGGSCSCBCCSTTCTTCBCHHHHHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCe---EEEEecCCCCC--------ceeccchhhhcCCCCCCCCHHHHHHHHHHH
Confidence 3468999999999999999999999887 99999763211 1111111112222211000 0001223345
Q ss_pred HHHCCcEEEcCCeEEEEeCCC-CEE-EcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHH
Q 013890 82 YKEKGIELILSTEIVRADIAS-KTL-LSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIK 159 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~-~~v-~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~ 159 (434)
+.+.+++++.++ +..++... .++ .+.++.++.||+||+|||+.|..|+.++........++++....+. +
T Consensus 81 ~~~~~v~~~~~~-v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~------~- 152 (335)
T 2a87_A 81 ALRFGADLRMED-VESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGF------F- 152 (335)
T ss_dssp HHHTTCEEECCC-EEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHHHGG------G-
T ss_pred HHHcCCEEEEee-EEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeeccchh------h-
Confidence 667899999985 88888732 356 6677888999999999999988776432211112344433222211 1
Q ss_pred hcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcE
Q 013890 160 AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEV 239 (434)
Q Consensus 160 ~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~ 239 (434)
..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.. .+.+. .+.+++.||++++++.+.++.. ++.+
T Consensus 153 -~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~~~~~---~~~~~~~gV~v~~~~~v~~i~~--~~~~ 223 (335)
T 2a87_A 153 -FRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---SKIML---DRARNNDKIRFLTNHTVVAVDG--DTTV 223 (335)
T ss_dssp -GTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---CTTHH---HHHHHCTTEEEECSEEEEEEEC--SSSC
T ss_pred -cCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---cHHHH---HHHhccCCcEEEeCceeEEEec--CCcE
Confidence 2579999999999999999999999999999999887643 22222 2345678999999999999986 3333
Q ss_pred EEEEeC---CC--cEEEcCEEEEccCCccChhhhhccccc-cCCcEEeCCC-CCCCCCceEEecccccccccccCccccc
Q 013890 240 NEVKLK---DG--RTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDF-FKTSADDVYAVGDVATFPMKLYREMRRV 312 (434)
Q Consensus 240 ~~v~~~---~g--~~i~~d~vv~a~G~~p~~~~~~~~~~~-~~g~i~vd~~-~~t~~~~iya~Gd~~~~~~~~~~~~~~~ 312 (434)
..+.+. +| +++++|.|++|+|++|++++++.++.. .+|+|.||++ ++|+.|+|||+|||+..+.
T Consensus 224 ~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~--------- 294 (335)
T 2a87_A 224 TGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTY--------- 294 (335)
T ss_dssp CEEEEEEETTSCCEEECCSCEEECSCEEECCTTTBTTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSC---------
T ss_pred eEEEEEEcCCCceEEeecCEEEEccCCccChhHhhcccccCCCccEEeCCCCCccCCCCEEEeeecCCccH---------
Confidence 344443 44 579999999999999999988756665 5789999985 6899999999999998642
Q ss_pred ccHHHHHHHHHHHHHHHhccCC
Q 013890 313 EHVDHARKSAEQAVKTIMATEG 334 (434)
Q Consensus 313 ~~~~~A~~~g~~aa~~i~~~~~ 334 (434)
..+..|..+|+.||.+|...+.
T Consensus 295 ~~~~~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 295 RQAVTAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHhh
Confidence 4677889999999999886553
No 73
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=3.4e-36 Score=291.17 Aligned_cols=291 Identities=22% Similarity=0.270 Sum_probs=226.8
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHH
Q 013890 6 FKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~---~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
+||+|||||++|+++|..|++ .|.+ |+|||+++.+.+. +....... ...... .....+.+.+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~---V~vie~~~~~~~~-~~~~~~~~---~~~~~~--------~~~~~~~~~~ 66 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKAD---VKVINKSRFSYFR-PALPHVAI---GVRDVD--------ELKVDLSEAL 66 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSE---EEEEESSSEEEEC-CSSCCCCS---SCCCCC--------CEEEEHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCe---EEEEeCCCCceec-cchhhccc---CCcCHH--------HHHHHHHHHH
Confidence 589999999999999999999 6665 9999999864332 21111000 000000 0123455667
Q ss_pred HHCCcEEEcCCeEEEEeCCCCEEEcCCCc----EEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHH
Q 013890 83 KEKGIELILSTEIVRADIASKTLLSATGL----IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~----~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l 158 (434)
.+.+++++.+ +|+.++.+.+.|.+.++. ++.||+||+|||+.|..|+ ++|.+. ..++..+..++..+.+.+
T Consensus 67 ~~~gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~---ipG~~~-~~~~~~~~~~~~~~~~~l 141 (409)
T 3h8l_A 67 PEKGIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATEL---VKGWDK-YGYSVCEPEFATKLREKL 141 (409)
T ss_dssp GGGTCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGG---SBTHHH-HCEESSSTTHHHHHHHHH
T ss_pred hhCCeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccC---CCChhh-cCcCcCCHHHHHHHHHHH
Confidence 7789999998 999999998888887665 4999999999999998877 455432 456667788888888888
Q ss_pred HhcCCCcEEEECCCH-------------------------HHHHHHH----HHHHCCC----eEEEEeeCCccCCcccCH
Q 013890 159 KAKKNGKAVVVGGGY-------------------------IGLELSA----ALKINNI----DVSMVYPEPWCMPRLFTA 205 (434)
Q Consensus 159 ~~~~~~~vvVvG~g~-------------------------~g~e~a~----~l~~~g~----~v~~~~~~~~~~~~~~~~ 205 (434)
.... ++++|||+|+ .++|+|. .+.+.|. +|+++++.+ .++. +++
T Consensus 142 ~~~~-~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~-~~~ 218 (409)
T 3h8l_A 142 ESFQ-GGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSD-LSP 218 (409)
T ss_dssp HHCC-SEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTT-BCH
T ss_pred HHhc-CCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccc-cCH
Confidence 7643 5667899982 4677764 5566774 899999988 6654 789
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhhhc--cccccCCcEEeCC
Q 013890 206 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLFKG--QVAENKGGIETDD 283 (434)
Q Consensus 206 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~--~~~~~~g~i~vd~ 283 (434)
++.+.+.+.+++.||++++++.|++++. + .+.+++|+++++|.+++++|++|+..+... ++...+|+|.||+
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~~~g~~~~~D~vi~a~G~~~~~~l~~~~~~l~~~~G~i~vd~ 292 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDL 292 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEETTSCEEECSEEEEECCEECCHHHHTSCGGGSCTTSCBCBBT
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEECCCCEEeeeEEEECCCCCccHHHHhccccCcCCCCCEEeCc
Confidence 9999999999999999999999999975 2 377899999999999999999999655555 3433678899999
Q ss_pred CCCC-CCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccC
Q 013890 284 FFKT-SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 284 ~~~t-~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
++|| +.|||||+|||+..+.. +.+..|..||+.||+||.+.+
T Consensus 293 ~~~~~~~~~vfa~GD~~~~~~~--------~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 293 NMVSIKYDNVYAVGDANSMTVP--------KLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp TSBBSSCTTEEECGGGBTTCCS--------CCHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCEEEeehhccCCCC--------cHHHHHHHHHHHHHHHHHHHh
Confidence 9999 99999999999986433 678889999999999998876
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=9.6e-36 Score=282.76 Aligned_cols=302 Identities=17% Similarity=0.248 Sum_probs=202.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--CCCCCccccccCCCCCCCCCCcceecCCC-------CC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--YERPALSKAYLFPEGTARLPGFHVCVGSG-------GE 75 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 75 (434)
++||+|||||++|+++|..|+++|++ |+|||+++... |........+..+.....++++....... ..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~---v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLS---YVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVL 79 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCC---EEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHH
Confidence 58999999999999999999999987 99999996532 11100011111111112222221110000 01
Q ss_pred CCCHhHHHHCCcEEEcCCeEEEEeCCCCE---EEcCCCcEEEeceEEEccCC--CcccccCCCCCCCCCCCEEEEeCHHH
Q 013890 76 RLLPEWYKEKGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGS--TVLRLTDFGVEGADAKNIFYLREIDD 150 (434)
Q Consensus 76 ~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lilAtG~--~~~~p~~~~i~g~~~~~v~~~~~~~~ 150 (434)
....+.+++.+++++.+++|+.++.+++. |.+.++ ++.||+||+|||. .|..|+.++..... ...++.....+
T Consensus 80 ~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~-~~~~~~~~~~~ 157 (357)
T 4a9w_A 80 AYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFA-GIQLHSAHYST 157 (357)
T ss_dssp HHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCC-SEEEEGGGCCC
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccC-CcEEEeccCCC
Confidence 12334456679999999999999987776 666666 8999999999995 56666643332221 12232222221
Q ss_pred HHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeC-CccCCccc-CHHHHHHHHHHHH------------
Q 013890 151 ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE-PWCMPRLF-TADIAAFYEGYYA------------ 216 (434)
Q Consensus 151 ~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~-~~~~~~~~-~~~~~~~~~~~l~------------ 216 (434)
.. ...+++++|||+|++|+|+|..|.+.+ +|+++.+. +.+++..+ +..+.+.+.+.+.
T Consensus 158 ~~-------~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (357)
T 4a9w_A 158 PA-------PFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPP 229 (357)
T ss_dssp SG-------GGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC------------------
T ss_pred hh-------hcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCccc
Confidence 11 125789999999999999999999998 69999887 45555422 2344333333332
Q ss_pred ----------------HcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhhhc-cccccCCcE
Q 013890 217 ----------------NKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGI 279 (434)
Q Consensus 217 ----------------~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~~~g~i 279 (434)
+.|+ +..+..+.+++. + .+.+.+|+++++|.|++|+|++|++++++. ++...+|+|
T Consensus 230 ~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~--~----~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~G~i 302 (357)
T 4a9w_A 230 GGFGDIVMVPPVLDARARGV-LAAVPPPARFSP--T----GMQWADGTERAFDAVIWCTGFRPALSHLKGLDLVTPQGQV 302 (357)
T ss_dssp ----CBCCCHHHHHHHHTTC-CCEECCCSEEET--T----EEECTTSCEEECSEEEECCCBCCCCGGGTTTTCBCTTSCB
T ss_pred ccccCcccChhHHHHHhcCc-eEEecCcceEeC--C----eeEECCCCEecCCEEEECCCcCCCCcccCcccccCCCCCc
Confidence 3444 555566667654 2 478899999999999999999999888754 555567899
Q ss_pred EeCCC--CCCCCCceEEec--ccccccccccCcccccccHHHHHHHHHHHHHHHhccCCC
Q 013890 280 ETDDF--FKTSADDVYAVG--DVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 280 ~vd~~--~~t~~~~iya~G--d~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
.||++ ++|+.|+|||+| ||+.... ..+..|..||+.+|.+|...+.+
T Consensus 303 ~vd~~~l~~t~~~~vya~Gd~d~~~~~~---------~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 303 EVDGSGLRALAVPSVWLLGYGDWNGMAS---------ATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp CBCTTSCBBSSCTTEEECSSCGGGSTTC---------SSTTTHHHHHHHHHHHHHHHTC-
T ss_pred cccCCcccCCCCCCeEEeccccccccch---------hhhhhhHHHHHHHHHHHHHHHHh
Confidence 99999 899999999999 5555221 44556889999999999987654
No 75
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2.8e-34 Score=274.18 Aligned_cols=302 Identities=14% Similarity=0.163 Sum_probs=207.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEeCCCCCC--CCC-CCccccccCCCCCC---CCCCccee--------
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEAVAP--YER-PALSKAYLFPEGTA---RLPGFHVC-------- 69 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~-~~~~V~vie~~~~~~--~~~-~~~~~~~~~~~~~~---~~~~~~~~-------- 69 (434)
++||+|||||++|+++|..|++.|+ + |+|||+++ .. +.. +.. ..++.+.... .++.+...
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~---v~lie~~~-~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 78 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITD---VIILEKGT-VGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAF 78 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCC---EEEECSSS-TTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCc---EEEEecCC-CCCccccCccc-ccccCcchhcccCCchhhhhccccccccc
Confidence 5899999999999999999999987 5 99999986 11 000 000 0000000000 00000000
Q ss_pred -cCCCC------CCCCHhHHHHCCcEEEcCCeEEEEeCCC--CEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCC
Q 013890 70 -VGSGG------ERLLPEWYKEKGIELILSTEIVRADIAS--KTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAK 140 (434)
Q Consensus 70 -~~~~~------~~~~~~~~~~~~v~~~~~~~v~~i~~~~--~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~ 140 (434)
..... ......++++.+++++.++.|+.++.++ ..|.+.++ ++.||+||+|||+.+. |. +++ .
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~-p~---ip~---~ 150 (369)
T 3d1c_A 79 TFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF-PK---KPF---K 150 (369)
T ss_dssp HHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS-BC---CCS---S
T ss_pred cccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc-cC---CCC---C
Confidence 00000 0112334456899999998999998764 35665555 5899999999999865 43 343 2
Q ss_pred CEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc------ccCHHHHHHHHHH
Q 013890 141 NIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------LFTADIAAFYEGY 214 (434)
Q Consensus 141 ~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~------~~~~~~~~~~~~~ 214 (434)
.+++...+.+.. ..++++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++. .+++.+.+.+.+.
T Consensus 151 ~~~~~~~~~~~~-------~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~ 223 (369)
T 3d1c_A 151 YGIHYSEIEDFD-------NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNV 223 (369)
T ss_dssp SCEEGGGCSCGG-------GSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHH
T ss_pred ceechhhcCChh-------hcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHH
Confidence 344433322211 225779999999999999999999999999999998877632 1467778899999
Q ss_pred HHHcC-cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEE-cCEEEEccCCccChhhhhc-cccccCCcEEeCCC-CCCCCC
Q 013890 215 YANKG-IKIIKGTVAVGFTTNADGEVNEVKLKDGRTLE-ADIVVVGVGGRPLISLFKG-QVAENKGGIETDDF-FKTSAD 290 (434)
Q Consensus 215 l~~~g-V~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~-~d~vv~a~G~~p~~~~~~~-~~~~~~g~i~vd~~-~~t~~~ 290 (434)
+++.| |+++.++.|.+++..++ ...+.+.+|+++. +|.||+|+|++|+++++.. .+...+|++.||++ ++|++|
T Consensus 224 l~~~g~v~~~~~~~v~~i~~~~~--~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~~~~~t~~~ 301 (369)
T 3d1c_A 224 IKQGARIEMNVHYTVKDIDFNNG--QYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYP 301 (369)
T ss_dssp HHTTCCEEEECSCCEEEEEEETT--EEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCTTSBBSSST
T ss_pred HhhCCcEEEecCcEEEEEEecCC--ceEEEecCCeEeccCCceEEeeccCCccchhhhhhccCCCCCEEechhhcccCCC
Confidence 99997 99999999999975222 2467788887665 6999999999999965543 34445677999975 678999
Q ss_pred ceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCC
Q 013890 291 DVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG 334 (434)
Q Consensus 291 ~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 334 (434)
+|||+|||+..+.... ..+..+..||+.+|++|.+...
T Consensus 302 ~v~a~GD~~~~~~~~~------~~~~~~~~~a~~~a~~l~~~~~ 339 (369)
T 3d1c_A 302 NIFMIGATVENDNAKL------CYIYKFRARFAVLAHLLTQREG 339 (369)
T ss_dssp TEEECSTTCCCSSCCC------CSHHHHGGGHHHHHHHHHHHTT
T ss_pred CeEEeccccccCCeeE------EEEehhhHHHHHHHHHHhcccC
Confidence 9999999998755321 3455677899999999987654
No 76
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=7.6e-35 Score=283.29 Aligned_cols=304 Identities=17% Similarity=0.185 Sum_probs=218.2
Q ss_pred CcEEEECCCHHHHHHHHHHHH--cCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 6 FKYVILGGGVSAGYAAREFAK--QGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~--~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+||||||||++|+++|..|++ .+++ |+|||+++.+.|. +.+. .+.... .... .....+.++++
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~---Vtlie~~~~~~~~-~~~~-~~~~g~--~~~~--------~~~~~~~~~~~ 67 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLK---ITLISDRPYFGFT-PAFP-HLAMGW--RKFE--------DISVPLAPLLP 67 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCE---EEEECSSSEEECG-GGHH-HHHHTC--SCGG--------GSEEESTTTGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCe---EEEECCCCCCCcC-CCcc-hhccCc--cCHH--------HHHHHHHHHHH
Confidence 799999999999999999999 4554 9999999765542 1110 000000 0000 00123455666
Q ss_pred HCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhc-C
Q 013890 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAK-K 162 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~-~ 162 (434)
+.+++++.+ .++.++++.+.+.+.++.++.||+||+|||+.|..|. +.. . ...+...+..++..+.+.++.. +
T Consensus 68 ~~gv~~~~~-~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg---~~~-~-g~~~~~~~~~~a~~~~~~~~~~~~ 141 (430)
T 3h28_A 68 KFNIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGA---EGQ-E-ENSTSICTAEHALETQKKLQELYA 141 (430)
T ss_dssp GGTEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEECCS---BTH-H-HHSCCCSSHHHHHHHHHHHHHHHH
T ss_pred hcCCEEEEE-EEEEEECCCCEEEECCCcEEECCEEEEcCCcccccCC---CCC-c-CCccCcCCHHHHHHHHHHHHHHHh
Confidence 789999986 9999999999999988888999999999999987653 221 0 1122344667776666554432 2
Q ss_pred CCcEEEECCCHHH------HHHH----HHHHHCC----CeEEEEeeCCccCCcc--cCHHHHHHHHHHHHHcCcEEEcCC
Q 013890 163 NGKAVVVGGGYIG------LELS----AALKINN----IDVSMVYPEPWCMPRL--FTADIAAFYEGYYANKGIKIIKGT 226 (434)
Q Consensus 163 ~~~vvVvG~g~~g------~e~a----~~l~~~g----~~v~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~gV~~~~~~ 226 (434)
.++++|||+|+.+ +|+| ..+.+.| .+|+++++.+.+.... -.++..+.+.+.+++.||++++++
T Consensus 142 ~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~ 221 (430)
T 3h28_A 142 NPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANV 221 (430)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSC
T ss_pred cCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCC
Confidence 4466788887543 7777 4555677 4899999887663210 123578888999999999999999
Q ss_pred eEEEEEecCCCcEEEEEeCC----CcEEEcCEEEEccCCccChhhhhc--cccccCC-cEEeCCCCCC-CCCceEEeccc
Q 013890 227 VAVGFTTNADGEVNEVKLKD----GRTLEADIVVVGVGGRPLISLFKG--QVAENKG-GIETDDFFKT-SADDVYAVGDV 298 (434)
Q Consensus 227 ~v~~i~~~~~g~~~~v~~~~----g~~i~~d~vv~a~G~~p~~~~~~~--~~~~~~g-~i~vd~~~~t-~~~~iya~Gd~ 298 (434)
.|++++. ++ +.+++ ++++++|.+++++|++|+..+... ++...+| +|.||+++|| ++|||||+|||
T Consensus 222 ~v~~v~~--~~----v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~ 295 (430)
T 3h28_A 222 AVKAIEP--DK----VIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVV 295 (430)
T ss_dssp EEEEECS--SE----EEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTT
T ss_pred EEEEEeC--Ce----EEEEecCCCceEEeeeEEEECCCCccchhHhhccccCcCCCCCEEecCccccCCCCCCEEEEEee
Confidence 9999965 22 34444 678999999999999998766653 5544678 8999999999 99999999999
Q ss_pred ccccccccCccc---ccccHHHHHHHHHHHHHHHhccCCCCc
Q 013890 299 ATFPMKLYREMR---RVEHVDHARKSAEQAVKTIMATEGGKT 337 (434)
Q Consensus 299 ~~~~~~~~~~~~---~~~~~~~A~~~g~~aa~~i~~~~~~~~ 337 (434)
+..+.. .+.+. .+++...|..||+.||+||...+.+++
T Consensus 296 ~~~~~~-~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~ 336 (430)
T 3h28_A 296 TAIPPI-EKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp BCCCCS-SCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eccCCc-cCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 987642 11111 136788999999999999998887753
No 77
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=8.9e-34 Score=275.76 Aligned_cols=287 Identities=20% Similarity=0.222 Sum_probs=202.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
..+||+|||||+||+++|..|++.|++ |+|||+.+.... ++.. .+|.+... ........++++
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~---V~v~e~~~~~GG--------~l~~----gip~~~~~--~~~~~~~~~~l~ 183 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYE---VHVYDRYDRMGG--------LLVY----GIPGFKLE--KSVVERRVKLLA 183 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSSCST--------HHHH----TSCTTTSC--HHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCe---EEEEeccCCCCC--------eeee----cCCCccCC--HHHHHHHHHHHH
Confidence 357999999999999999999999987 999999865321 1100 11221110 000122346677
Q ss_pred HCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCC-cccccCCCCCCCCCCCEEEEeCHHHHHHHHHH-----
Q 013890 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGST-VLRLTDFGVEGADAKNIFYLREIDDADKLVEA----- 157 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~-~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~----- 157 (434)
+.+++++.++.+. +.+.+.+. .+.||+||||||+. |+.++ ++|.+.+++++..++.........
T Consensus 184 ~~gv~~~~~~~v~------~~v~~~~~-~~~~d~vvlAtG~~~~~~~~---ipG~~~~gv~~a~~~l~~~~~~~~~~~~~ 253 (456)
T 2vdc_G 184 DAGVIYHPNFEVG------RDASLPEL-RRKHVAVLVATGVYKARDIK---APGSGLGNIVAALDYLTTSNKVSLGDTVE 253 (456)
T ss_dssp HTTCEEETTCCBT------TTBCHHHH-HSSCSEEEECCCCCEECCTT---CSCCTTTTEEEHHHHHHHHHHHHCTTTCS
T ss_pred HCCcEEEeCCEec------cEEEhhHh-HhhCCEEEEecCCCCCCCCC---CCCCcCCCcEEHHHHHHHhhhhhcccccc
Confidence 8899999986542 22323222 25799999999996 55555 677777788864433221111100
Q ss_pred -----HHhcCCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCcc-CCcccCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 013890 158 -----IKAKKNGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPWC-MPRLFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 158 -----l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~-~v~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
.....+++++|||+|++|+|+|..+.+.|. +|+++.|.+.. ++. .+.+ .+.+++.||++++++.+.+
T Consensus 254 ~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~-~~~e-----~~~~~~~Gv~~~~~~~~~~ 327 (456)
T 2vdc_G 254 AYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPG-SQRE-----VAHAEEEGVEFIWQAAPEG 327 (456)
T ss_dssp SCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSS-CHHH-----HHHHHHTTCEEECCSSSCC
T ss_pred cccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCC-CHHH-----HHHHHHCCCEEEeCCCceE
Confidence 011357899999999999999999999998 59999998865 553 2332 2457788999999999998
Q ss_pred EEecCCCcEEEEEe---------C---------CC--cEEEcCEEEEccCCccChh--hhh-ccccc-cCCcEEeCCC-C
Q 013890 231 FTTNADGEVNEVKL---------K---------DG--RTLEADIVVVGVGGRPLIS--LFK-GQVAE-NKGGIETDDF-F 285 (434)
Q Consensus 231 i~~~~~g~~~~v~~---------~---------~g--~~i~~d~vv~a~G~~p~~~--~~~-~~~~~-~~g~i~vd~~-~ 285 (434)
+.. ++++.++.+ . +| .++++|.||+|+|++|+.. ++. .++.. .+|+|.||++ +
T Consensus 328 i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~ 405 (456)
T 2vdc_G 328 FTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTK 405 (456)
T ss_dssp EEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTC
T ss_pred EeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCC
Confidence 875 343322222 1 23 4689999999999999875 444 35665 5689999997 9
Q ss_pred CCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCC
Q 013890 286 KTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 286 ~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
||+.|+|||+|||+..+ .++..|+.+|+.||.+|...+.+
T Consensus 406 ~Ts~~~VfA~GD~~~g~----------~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 406 MTNMDGVFAAGDIVRGA----------SLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp BCSSTTEEECGGGGSSC----------CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEeccccCCc----------hHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999764 46888999999999999876543
No 78
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=9.6e-33 Score=293.31 Aligned_cols=315 Identities=18% Similarity=0.212 Sum_probs=216.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
.+||+|||||+||++||..|+++|+. +|+|||+++..... +. ..+|.+.... .......+++++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~--~Vtv~E~~~~~GG~--------~~----~~ip~~~~~~--~~~~~~~~~~~~ 250 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYS--DITIFEKQEYVGGL--------ST----SEIPQFRLPY--DVVNFEIELMKD 250 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCC--CEEEEESSSSCSTH--------HH----HTSCTTTSCH--HHHHHHHHHHHT
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCC--cEEEEeCCCCCCcc--------cc----ccCCcccCCH--HHHHHHHHHHHH
Confidence 57999999999999999999999972 29999998643211 10 0112211100 001122356778
Q ss_pred CCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCC-CcccccCCCCCCCC-CCCEEEEeCHHHHHHHHHHHH---
Q 013890 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGS-TVLRLTDFGVEGAD-AKNIFYLREIDDADKLVEAIK--- 159 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~-~~~~p~~~~i~g~~-~~~v~~~~~~~~~~~l~~~l~--- 159 (434)
.|++++.++.+. .+.+.+.++..+.||+||||||+ .|+.++. ++|.+ ..++++..++... +.....
T Consensus 251 ~gv~~~~~~~v~-----~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~--~~G~~~~~gv~~a~~~L~~--~~~~~~~~~ 321 (1025)
T 1gte_A 251 LGVKIICGKSLS-----ENEITLNTLKEEGYKAAFIGIGLPEPKTDDI--FQGLTQDQGFYTSKDFLPL--VAKSSKAGM 321 (1025)
T ss_dssp TTCEEEESCCBS-----TTSBCHHHHHHTTCCEEEECCCCCEECCCGG--GTTCCTTTTEEEHHHHHHH--HHHHHCBTT
T ss_pred CCcEEEcccEec-----cceEEhhhcCccCCCEEEEecCCCCCCCCCC--CCCCCCCCCEEEhHHHHHH--HHhhccccc
Confidence 899999986652 13344444455789999999999 5876654 23332 3567764432221 111100
Q ss_pred -------hcCCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCc-cCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 013890 160 -------AKKNGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPW-CMPRLFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 160 -------~~~~~~vvVvG~g~~g~e~a~~l~~~g~-~v~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
...+++++|||+|++|+|+|..+.++|. +|+++++.+. .++. +++++ +.+++.||++++++.+.+
T Consensus 322 ~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~-~~~e~-----~~~~~~Gv~~~~~~~~~~ 395 (1025)
T 1gte_A 322 CACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRA-VPEEV-----ELAKEEKCEFLPFLSPRK 395 (1025)
T ss_dssp BSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCS-CHHHH-----HHHHHTTCEEECSEEEEE
T ss_pred ccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCC-CHHHH-----HHHHHcCCEEEeCCCceE
Confidence 1135799999999999999999999996 8999999884 4443 45544 456788999999999999
Q ss_pred EEecCCCcEEEEEeC------CC---------cEEEcCEEEEccCCccC-hhhhhc--cccc-cCCcEEeCC-CCCCCCC
Q 013890 231 FTTNADGEVNEVKLK------DG---------RTLEADIVVVGVGGRPL-ISLFKG--QVAE-NKGGIETDD-FFKTSAD 290 (434)
Q Consensus 231 i~~~~~g~~~~v~~~------~g---------~~i~~d~vv~a~G~~p~-~~~~~~--~~~~-~~g~i~vd~-~~~t~~~ 290 (434)
+.. +++.+..+++. +| .++++|.||+|+|++|+ ..++.. ++.. .+|+|.||+ ++||+.|
T Consensus 396 i~~-~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~ 474 (1025)
T 1gte_A 396 VIV-KGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEP 474 (1025)
T ss_dssp EEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSST
T ss_pred EEc-cCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCC
Confidence 976 35666656542 22 36899999999999864 555543 5666 468899997 8999999
Q ss_pred ceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCC---CCcccCCCCCCeeEE--eecCcceEEeec
Q 013890 291 DVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG---GKTVTGYDYLPYFYS--RAFDLSWQFYGD 361 (434)
Q Consensus 291 ~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~---~~~~~~~~~~p~~~~--~~~~~~~~~~G~ 361 (434)
+|||+|||+..+ .++..|..||+.||.+|.+.+. +.....+..+|++|+ ...++.....|.
T Consensus 475 ~VfA~GD~~~~~----------~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ev~~v~ls~~~~G~ 540 (1025)
T 1gte_A 475 WVFAGGDIVGMA----------NTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVDISVEMAGL 540 (1025)
T ss_dssp TEEECSGGGCSC----------CCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCCGGGGCCCCEEETTE
T ss_pred CEEEeCCCCCCc----------hHHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCccccccccccccceeeeccc
Confidence 999999999754 3577789999999999986332 222234567788776 445555555443
No 79
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=100.00 E-value=1.4e-32 Score=290.05 Aligned_cols=285 Identities=16% Similarity=0.226 Sum_probs=207.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
.+||+|||||+||++||.+|++.|++ |+|||+++.... + +... ....+++... ........+.+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~---V~lie~~~~~GG-~------~~~~-~k~~i~~~~~---~~~~~~~~~~l~~ 193 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGAR---VMLLDERAEAGG-T------LLDT-AGEQIDGMDS---SAWIEQVTSELAE 193 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSSG-G------GGGS-SCCEETTEEH---HHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCCCCCCc-e------eccC-CccccCCCCH---HHHHHHHHHHHhh
Confidence 57999999999999999999999987 999999865321 1 1100 0000111000 0000111223344
Q ss_pred -CCcEEEcCCeEEEEeCCCCEEE---------c--------CCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEe
Q 013890 85 -KGIELILSTEIVRADIASKTLL---------S--------ATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLR 146 (434)
Q Consensus 85 -~~v~~~~~~~v~~i~~~~~~v~---------~--------~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~ 146 (434)
.+++++.++.|+.++..+.... + .++.++.||+||||||+.|+.|+ ++|.+.+++++..
T Consensus 194 ~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~---ipG~~~~gv~~~~ 270 (965)
T 2gag_A 194 AEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIV---FENNDRPGIMLAG 270 (965)
T ss_dssp STTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCC---CBTCCSTTEEEHH
T ss_pred cCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCC---CCCCCCCCEEEhH
Confidence 4899999989998876543211 1 11236899999999999998877 5777778888754
Q ss_pred CHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCC
Q 013890 147 EIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGT 226 (434)
Q Consensus 147 ~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~ 226 (434)
+..+ +.+.....++++++|||+|++|+|+|..|.+.|.+|+++++.+.+++ . .+.+++.||++++++
T Consensus 271 ~~~~---~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~-----~-----~~~l~~~GV~v~~~~ 337 (965)
T 2gag_A 271 AVRS---YLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA-----A-----AAQAVADGVQVISGS 337 (965)
T ss_dssp HHHH---HHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH-----H-----HHHHHHTTCCEEETE
T ss_pred HHHH---HHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch-----h-----HHHHHhCCeEEEeCC
Confidence 4322 22211222568999999999999999999999999999999876542 1 466889999999999
Q ss_pred eEEEEEecCCCcEEEEEeCC-------C--cEEEcCEEEEccCCccChhhhhccccccCCcEEeCCCCC-----CCCCce
Q 013890 227 VAVGFTTNADGEVNEVKLKD-------G--RTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFK-----TSADDV 292 (434)
Q Consensus 227 ~v~~i~~~~~g~~~~v~~~~-------g--~~i~~d~vv~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~-----t~~~~i 292 (434)
.+.++..++++.+..|.+.+ | +++++|.|++|+|++|+++++... +++|.||++++ |++|+|
T Consensus 338 ~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~----~g~i~vd~~~~~~v~~ts~p~I 413 (965)
T 2gag_A 338 VVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR----QGKLDWDTTIHAFVPADAVANQ 413 (965)
T ss_dssp EEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT----TCCEEEETTTTEEEECSCCTTE
T ss_pred EeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC----CCcEEEcCcccccccCCCCCCE
Confidence 99999873245666676654 4 679999999999999999877432 47899999888 899999
Q ss_pred EEecccccccccccCcccccccHHHHHHHHHHHHHHHhccCC
Q 013890 293 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG 334 (434)
Q Consensus 293 ya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 334 (434)
||+|||++.+. +..|..||+.||.+|.+...
T Consensus 414 yAaGD~a~~~~-----------l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 414 HLAGAMTGRLD-----------TASALSTGAATGAAAATAAG 444 (965)
T ss_dssp EECGGGGTCCS-----------HHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEecCCchh-----------HHHHHHHHHHHHHHHHHHcC
Confidence 99999997642 34789999999999987653
No 80
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=100.00 E-value=1.6e-33 Score=274.67 Aligned_cols=295 Identities=14% Similarity=0.158 Sum_probs=202.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
..+||+|||||+||+++|..|++.+ +..+|+|||+++.. |.. +.... .|.+... ......+.++++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g-~~~~V~vie~~~~~-gg~-------~~~g~---~p~~~~~--~~~~~~~~~~~~ 70 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHH-SRAHVDIYEKQLVP-FGL-------VRFGV---APDHPEV--KNVINTFTQTAR 70 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHC-SSCEEEEECSSSSS-CTH-------HHHTS---CTTCGGG--GGHHHHHHHHHT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcC-CCCCEEEEeCCCcC-Cce-------eeccc---CCCCccH--HHHHHHHHHHHH
Confidence 3579999999999999999999987 23449999998753 211 10000 1111100 000122345566
Q ss_pred HCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCc-ccccCCCCCCCCCCCEEEEeCHHHHHHH-HH--HHH
Q 013890 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTV-LRLTDFGVEGADAKNIFYLREIDDADKL-VE--AIK 159 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~-~~p~~~~i~g~~~~~v~~~~~~~~~~~l-~~--~l~ 159 (434)
+.+++++.++.+ .+.|.+.+ ..+.||+||+|||+.| +.|+ ++|.+.+++++..++.....- .+ .+.
T Consensus 71 ~~gv~~~~~~~v------~~~V~~~~-~~~~~d~lVlAtGs~~~~~~~---ipG~~~~gv~~~~~~~~~~~~~~d~~~~~ 140 (460)
T 1cjc_A 71 SDRCAFYGNVEV------GRDVTVQE-LQDAYHAVVLSYGAEDHQALD---IPGEELPGVFSARAFVGWYNGLPENRELA 140 (460)
T ss_dssp STTEEEEBSCCB------TTTBCHHH-HHHHSSEEEECCCCCEECCCC---CTTTTSTTEEEHHHHHHHHTTCGGGTTCC
T ss_pred hCCcEEEeeeEE------eeEEEecc-ceEEcCEEEEecCcCCCCCCC---CCCCCCCcEEEHHHHHHHhhcCccccccc
Confidence 789999988654 12344333 3468999999999995 6566 677666788876544221100 00 000
Q ss_pred -hcCCCcEEEECCCHHHHHHHHHHH--------------------HCCC-eEEEEeeCCccCCcc---------------
Q 013890 160 -AKKNGKAVVVGGGYIGLELSAALK--------------------INNI-DVSMVYPEPWCMPRL--------------- 202 (434)
Q Consensus 160 -~~~~~~vvVvG~g~~g~e~a~~l~--------------------~~g~-~v~~~~~~~~~~~~~--------------- 202 (434)
...+++++|||+|++|+|+|..|. +.+. +|+++.|.+.+...+
T Consensus 141 ~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~ 220 (460)
T 1cjc_A 141 PDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTR 220 (460)
T ss_dssp CCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCce
Confidence 114789999999999999999998 5677 799999887652111
Q ss_pred -------c----------CH---HHHHHHHHHHHH--------------cCcEEEcCCeEEEEEecCCC-cEEEEEeC--
Q 013890 203 -------F----------TA---DIAAFYEGYYAN--------------KGIKIIKGTVAVGFTTNADG-EVNEVKLK-- 245 (434)
Q Consensus 203 -------~----------~~---~~~~~~~~~l~~--------------~gV~~~~~~~v~~i~~~~~g-~~~~v~~~-- 245 (434)
+ +. .+.+.+.+.+++ +||++++++.+.+|..++++ ++..|.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~ 300 (460)
T 1cjc_A 221 PMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVT 300 (460)
T ss_dssp EECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEE
T ss_pred eEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEE
Confidence 0 11 023344445555 89999999999999874335 66556553
Q ss_pred -------------CC--cEEEcCEEEEccCCccChhhhhccc-cc-cCCcEEeCCCCCCC-CCceEEecccccccccccC
Q 013890 246 -------------DG--RTLEADIVVVGVGGRPLISLFKGQV-AE-NKGGIETDDFFKTS-ADDVYAVGDVATFPMKLYR 307 (434)
Q Consensus 246 -------------~g--~~i~~d~vv~a~G~~p~~~~~~~~~-~~-~~g~i~vd~~~~t~-~~~iya~Gd~~~~~~~~~~ 307 (434)
+| +++++|.||+|+|++|+. + .++ .. ++|+|.||+++||+ +|+|||+|||+..+.
T Consensus 301 ~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l--~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~---- 373 (460)
T 1cjc_A 301 RLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I--DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPT---- 373 (460)
T ss_dssp EEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C--CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTT----
T ss_pred EEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C--CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCC----
Confidence 34 579999999999999998 3 456 55 56889999999998 799999999996543
Q ss_pred cccccccHHHHHHHHHHHHHHHhccCC
Q 013890 308 EMRRVEHVDHARKSAEQAVKTIMATEG 334 (434)
Q Consensus 308 ~~~~~~~~~~A~~~g~~aa~~i~~~~~ 334 (434)
..+..|..+|+.+|.+|++...
T Consensus 374 -----~~i~~a~~~g~~aa~~i~~~l~ 395 (460)
T 1cjc_A 374 -----GVITTTMTDSFLTGQILLQDLK 395 (460)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHH
Confidence 3466789999999999987653
No 81
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.98 E-value=2.9e-33 Score=272.62 Aligned_cols=289 Identities=16% Similarity=0.190 Sum_probs=197.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHH-c------CCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAK-Q------GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERL 77 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~-~------g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (434)
.+||+|||||+||++||..|++ . +.+ |+|||+.+.+ |... .. .. .|.... .......
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~---V~lie~~~~~-gg~~--~~-----gv---~p~~~~--~~~~~~~ 66 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMA---VDMLEMLPTP-WGLV--RS-----GV---APDHPK--IKSISKQ 66 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEE---EEEEESSSSC-STHH--HH-----TS---CTTCTG--GGGGHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCe---EEEEecCCCC-CCcc--cc-----cc---CCCCCC--HHHHHHH
Confidence 5899999999999999999999 7 665 9999998652 2111 00 00 111100 0000122
Q ss_pred CHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCC-cccccCCCCCCCCCCCEEEEeCHHHHHHH-H
Q 013890 78 LPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGST-VLRLTDFGVEGADAKNIFYLREIDDADKL-V 155 (434)
Q Consensus 78 ~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~-~~~p~~~~i~g~~~~~v~~~~~~~~~~~l-~ 155 (434)
+.+++++.+++++.+..+ .+.|.+.++ .+.||+||+|||+. |..++ ++|.+..++++..++.....- .
T Consensus 67 ~~~~~~~~~v~~~~~v~v------~~~v~~~~~-~~~~d~lViAtG~~~~~~~~---ipG~~~~gv~~~~~~~~~~~~~~ 136 (456)
T 1lqt_A 67 FEKTAEDPRFRFFGNVVV------GEHVQPGEL-SERYDAVIYAVGAQSDRMLN---IPGEDLPGSIAAVDFVGWYNAHP 136 (456)
T ss_dssp HHHHHTSTTEEEEESCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCC---CTTTTSTTEEEHHHHHHHHTTCG
T ss_pred HHHHHhcCCCEEEeeEEE------CCEEEECCC-eEeCCEEEEeeCCCCCCCCC---CCCCCCCCcEEHHHHHhhhhcCc
Confidence 345566678999887542 233444444 47899999999997 56665 577666778765443211000 0
Q ss_pred ---HHHHhcCCCcEEEECCCHHHHHHHHHHHHC--------------------C-CeEEEEeeCCccCCcccCH------
Q 013890 156 ---EAIKAKKNGKAVVVGGGYIGLELSAALKIN--------------------N-IDVSMVYPEPWCMPRLFTA------ 205 (434)
Q Consensus 156 ---~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~--------------------g-~~v~~~~~~~~~~~~~~~~------ 205 (434)
..+....+++++|||+|++|+|+|..|.+. | .+|+++.|.+.+...+.++
T Consensus 137 d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~ 216 (456)
T 1lqt_A 137 HFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELA 216 (456)
T ss_dssp GGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGG
T ss_pred ccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhh
Confidence 001112578999999999999999999874 5 4999999988765432111
Q ss_pred ------------H------------------HHHHHHHHHHH------cCcEEEcCCeEEEEEecCCCcEEEEEeC----
Q 013890 206 ------------D------------------IAAFYEGYYAN------KGIKIIKGTVAVGFTTNADGEVNEVKLK---- 245 (434)
Q Consensus 206 ------------~------------------~~~~~~~~l~~------~gV~~~~~~~v~~i~~~~~g~~~~v~~~---- 245 (434)
+ +.+.+.+.+++ +||++++++.+.++.. ++.+..+.+.
T Consensus 217 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~--~~~v~~v~~~~~~~ 294 (456)
T 1lqt_A 217 DLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKG--KRKVERIVLGRNEL 294 (456)
T ss_dssp GCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEEC--SSSCCEEEEEEEEE
T ss_pred cCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEec--CCcEeEEEEEEEEe
Confidence 1 12344455555 7999999999999986 3444445443
Q ss_pred ------------CC--cEEEcCEEEEccCCccChhhhhccccc-cCCcEEeCCCCC-CCCCceEEecccccccccccCcc
Q 013890 246 ------------DG--RTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFK-TSADDVYAVGDVATFPMKLYREM 309 (434)
Q Consensus 246 ------------~g--~~i~~d~vv~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~-t~~~~iya~Gd~~~~~~~~~~~~ 309 (434)
+| ++++||.|++|+|++|+. + .++.+ .+|++.||+++| |+.|+|||+|||+..+.
T Consensus 295 ~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l--~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~------ 365 (456)
T 1lqt_A 295 VSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T--PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPT------ 365 (456)
T ss_dssp EECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C--TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSC------
T ss_pred cCCCcccccccCCCceEEEEcCEEEEccccccCC-C--CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCc------
Confidence 34 469999999999999998 3 35555 568899999999 79999999999997553
Q ss_pred cccccHHHHHHHHHHHHHHHhccC
Q 013890 310 RRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 310 ~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
..+..|..+|+.+|.+|++..
T Consensus 366 ---~~i~~a~~~g~~~a~~i~~~l 386 (456)
T 1lqt_A 366 ---GVIGTNKKDAQDTVDTLIKNL 386 (456)
T ss_dssp ---SCTTHHHHHHHHHHHHHHHHH
T ss_pred ---hhHHHHHHHHHHHHHHHHHHH
Confidence 235568899999999998764
No 82
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.98 E-value=3.3e-32 Score=267.61 Aligned_cols=312 Identities=15% Similarity=0.064 Sum_probs=196.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcC-----CCCCcEEEEeCCCCCCCCCCCcccc-ccC---------CCCCCCCCCcc--
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQG-----VKPGELAIISKEAVAPYERPALSKA-YLF---------PEGTARLPGFH-- 67 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g-----~~~~~V~vie~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~-- 67 (434)
.+||+|||||++|+++|..|++.| .+ |+|||+++...|....+... .+. ...+.....+.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~---v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~ 106 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALE---VLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNY 106 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCC---EEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCccc---EEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHh
Confidence 579999999999999999999998 66 99999998766543221110 000 00000000000
Q ss_pred -eecC--------CCC---C----CCCHhHHHHCCcEEEcCCeEEEEeCC---CC----EEEcCCCc----EEEeceEEE
Q 013890 68 -VCVG--------SGG---E----RLLPEWYKEKGIELILSTEIVRADIA---SK----TLLSATGL----IFKYQILVI 120 (434)
Q Consensus 68 -~~~~--------~~~---~----~~~~~~~~~~~v~~~~~~~v~~i~~~---~~----~v~~~~~~----~~~~d~lil 120 (434)
...+ ... . .......++.+++++.+++|+.++.. .+ +|.+.++. ++.||+||+
T Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVl 186 (463)
T 3s5w_A 107 LHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVV 186 (463)
T ss_dssp HHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEE
T ss_pred hhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEE
Confidence 0000 000 0 01112223457889999899999875 43 45555554 899999999
Q ss_pred ccCCCcccccCCCCCCCCCC-CEEEEeCHHH-HHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHC--CCeEEEEeeCC
Q 013890 121 ATGSTVLRLTDFGVEGADAK-NIFYLREIDD-ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEP 196 (434)
Q Consensus 121 AtG~~~~~p~~~~i~g~~~~-~v~~~~~~~~-~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~--g~~v~~~~~~~ 196 (434)
|||+.|..|+. +++.... .+++.....+ ...+.... ..+++++|||+|.+|+|+|..|.+. +.+|+++.|.+
T Consensus 187 AtG~~p~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~ 262 (463)
T 3s5w_A 187 SPGGTPRIPQV--FRALKGDGRVFHHSQYLEHMAKQPCSS--GKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRAS 262 (463)
T ss_dssp CCCCEECCCGG--GGGGTTCTTEEEGGGHHHHHCC---------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCCCCCCCcch--hhhcCCCCcEEECHHHHhhHHHhhhcc--cCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCC
Confidence 99999887763 2333333 5665444332 22221111 1478999999999999999999999 99999999998
Q ss_pred ccCCcc-------------------cCHHHHHHHHHHHHH--------------------------cCcEEEcCCeEEEE
Q 013890 197 WCMPRL-------------------FTADIAAFYEGYYAN--------------------------KGIKIIKGTVAVGF 231 (434)
Q Consensus 197 ~~~~~~-------------------~~~~~~~~~~~~l~~--------------------------~gV~~~~~~~v~~i 231 (434)
.+++.. ++++....+.+.+.. .||++++++.|+++
T Consensus 263 ~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v 342 (463)
T 3s5w_A 263 ALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERA 342 (463)
T ss_dssp SCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEE
T ss_pred CCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEE
Confidence 765421 122222223222222 69999999999999
Q ss_pred EecCCCcEEEEEeC---CCc--EEEcCEEEEccCCccC--hhhhhccccccCCcEEeCCCCCCC-----CCceEEecccc
Q 013890 232 TTNADGEVNEVKLK---DGR--TLEADIVVVGVGGRPL--ISLFKGQVAENKGGIETDDFFKTS-----ADDVYAVGDVA 299 (434)
Q Consensus 232 ~~~~~g~~~~v~~~---~g~--~i~~d~vv~a~G~~p~--~~~~~~~~~~~~g~i~vd~~~~t~-----~~~iya~Gd~~ 299 (434)
+.++++ ..+.+. +|+ ++++|.||+|||++|+ ..++....... |++.||+++|+. .|+|||+|||.
T Consensus 343 ~~~~~~--~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~-g~i~v~~~~~~~~~~~~~~~Ifa~G~~~ 419 (463)
T 3s5w_A 343 TATAQG--IELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL-GDHEIGRDYRLQTDERCKVAIYAQGFSQ 419 (463)
T ss_dssp EEETTE--EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB-C--CCCTTSBCCBCTTBCSEEEESSCCH
T ss_pred EecCCE--EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh-CCcccCcccccccCCCCCCeEEEcCCCc
Confidence 873333 456655 665 4999999999999999 45543221112 889999999973 56799999998
Q ss_pred cccccccCcccccccHHHHHHHHHHHHHHHhc
Q 013890 300 TFPMKLYREMRRVEHVDHARKSAEQAVKTIMA 331 (434)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 331 (434)
...... .+ .....|.+++++++..+..
T Consensus 420 ~~~g~~--~~---~l~~~a~r~~~i~~~~~~~ 446 (463)
T 3s5w_A 420 ASHGLS--DT---LLSVLPVRAEEISGSLYQH 446 (463)
T ss_dssp HHHCTT--TT---SSTTHHHHHHHHHHHHHHH
T ss_pred ccCCcC--cc---chhHHHHHHHHHHHHHHhh
Confidence 754321 11 3344566777777655443
No 83
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.98 E-value=3.2e-31 Score=259.51 Aligned_cols=285 Identities=15% Similarity=0.150 Sum_probs=195.5
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEeCCCCCC----CCC-CC------ccccccCCC-------CCCCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAVAP----YER-PA------LSKAYLFPE-------GTARLP 64 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~---~g~~~~~V~vie~~~~~~----~~~-~~------~~~~~~~~~-------~~~~~~ 64 (434)
+||+|||||++|++||..|++ .|++..+|+|||+++..+ +.. +. .....+... ....++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 799999999999999999999 776534599999986532 110 00 000000000 000011
Q ss_pred CcceecC-----CC------CCCCCHhHHHHCCcE--EEcCCeEEEEeCCCC----EEEcCC---C--cEEEeceEEEcc
Q 013890 65 GFHVCVG-----SG------GERLLPEWYKEKGIE--LILSTEIVRADIASK----TLLSAT---G--LIFKYQILVIAT 122 (434)
Q Consensus 65 ~~~~~~~-----~~------~~~~~~~~~~~~~v~--~~~~~~v~~i~~~~~----~v~~~~---~--~~~~~d~lilAt 122 (434)
++..... .. ....+.+++++.+++ ++.++.|+.++...+ +|.+.+ + .++.||+||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 1110000 00 001122334456777 888889999987655 566544 3 578999999999
Q ss_pred C--CCcccccCCCCCCCCC--CCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 123 G--STVLRLTDFGVEGADA--KNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 123 G--~~~~~p~~~~i~g~~~--~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
| +.|+.|+. +|.+. ..+++..++.+.. ...+++++|||+|++|+|+|..|++.|.+|+++.+.+.+
T Consensus 163 G~~s~p~~p~i---pG~~~~~g~~~hs~~~~~~~-------~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 163 GHFSTPYVPEF---EGFEKFGGRILHAHDFRDAL-------EFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp CSSSSBCCCCC---BTTTTCCSEEEEGGGCCCGG-------GGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCCCCccCCC---CCcccCCceEEehhhhCCHh-------HcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 9 88988874 54432 2345444333222 126899999999999999999999999999999998877
Q ss_pred CCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhhhc--cccccC
Q 013890 199 MPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLFKG--QVAENK 276 (434)
Q Consensus 199 ~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~--~~~~~~ 276 (434)
++..+ ..||+++ ..|.++.. + +|.+.+|+++++|.||+|||++|+.+++.. ++..++
T Consensus 233 ~~~~~-------------~~~V~~~--~~V~~i~~--~----~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~ 291 (464)
T 2xve_A 233 MGYKW-------------PENWDER--PNLVRVDT--E----NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNN 291 (464)
T ss_dssp CCCCC-------------CTTEEEC--SCEEEECS--S----EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCS
T ss_pred CCCCC-------------CCceEEc--CCeEEEeC--C----EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCC
Confidence 65422 2578887 67888853 2 478899999999999999999999988764 444444
Q ss_pred C-cEEeCC---CCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccC
Q 013890 277 G-GIETDD---FFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 277 g-~i~vd~---~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
+ .+ ++. .++|+.|+||++|||+.. ..+..|..||+.+++++.+..
T Consensus 292 ~~~v-~~~~~~~~~t~~p~i~aiGd~~~~-----------~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 292 RLWP-LNLYKGVVWEDNPKFFYIGMQDQW-----------YSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp SSCC-SSEETTTEESSSTTEEECSCSCCS-----------SCHHHHHHHHHHHHHHHTTSS
T ss_pred Cccc-ccccceEecCCCCCEEEEeCcccc-----------cchHHHHHHHHHHHHHHcCCC
Confidence 4 44 443 357899999999998863 346778899999999998764
No 84
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.97 E-value=2e-31 Score=262.97 Aligned_cols=257 Identities=15% Similarity=0.106 Sum_probs=190.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
..+||+|||||++|+++|.+|++. ++ |+|||+++..++.....+... ..++. .......++.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~---V~vie~~~~~GG~~~~~~~~~------~g~~~--------~~~~~~~~l~ 168 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LT---VALIEERGWLGGDMWLKGIKQ------EGFNK--------DSRKVVEELV 168 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CC---EEEECTTSSSSCSGGGTCSEE------TTTTE--------EHHHHHHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CC---EEEEeCCCCCCCeeecccccc------CCCCC--------CHHHHHHHHH
Confidence 357999999999999999999998 65 999999976544321111100 00110 0001111111
Q ss_pred ---HCCcEEEcCCeEEEEeCCCCEEEc---CCCc--EEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHH
Q 013890 84 ---EKGIELILSTEIVRADIASKTLLS---ATGL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLV 155 (434)
Q Consensus 84 ---~~~v~~~~~~~v~~i~~~~~~v~~---~~~~--~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~ 155 (434)
+.+++++.++.+..++.+.+.+.. .+++ .+.||++|+|||+.|+.|+ +++.+.+++++.. ++..+.
T Consensus 169 ~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~---~~g~~~~gv~~~~---~~~~~~ 242 (493)
T 1y56_A 169 GKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTML---FENNDMPGVFRRD---FALEVM 242 (493)
T ss_dssp HTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCC---CTTTTSTTEEEHH---HHHHHH
T ss_pred HHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCC---CCCCCCCCEEEcH---HHHHHH
Confidence 458999998888888877654322 3343 6899999999999998877 5777777888643 333333
Q ss_pred HHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecC
Q 013890 156 EAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 235 (434)
Q Consensus 156 ~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~ 235 (434)
+.....++++++|+|+|++|+| +.+++.||++++++.+.++..
T Consensus 243 ~~~~~~~~~~vvViGgG~~gle-----------------------------------~~l~~~GV~v~~~~~v~~i~~-- 285 (493)
T 1y56_A 243 NVWEVAPGRKVAVTGSKADEVI-----------------------------------QELERWGIDYVHIPNVKRVEG-- 285 (493)
T ss_dssp HTSCBCSCSEEEEESTTHHHHH-----------------------------------HHHHHHTCEEEECSSEEEEEC--
T ss_pred HhcccCCCCEEEEECCCHHHHH-----------------------------------HHHHhCCcEEEeCCeeEEEec--
Confidence 3222235689999999999988 456788999999999999986
Q ss_pred CCcEEEEEeCCCcEEEcCEEEEccCCccChhhhhc-cccc---cCCcEE-eCCCCCCCCCceEEecccccccccccCccc
Q 013890 236 DGEVNEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE---NKGGIE-TDDFFKTSADDVYAVGDVATFPMKLYREMR 310 (434)
Q Consensus 236 ~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~-~~~~---~~g~i~-vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~ 310 (434)
++.+..+.+++|+++++|.||+|+|++|+++++.. ++.. .+|+|. ||+++| +.|+|||+|||++.
T Consensus 286 ~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~~~--------- 355 (493)
T 1y56_A 286 NEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR-IKDGIYVAGSAVSI--------- 355 (493)
T ss_dssp SSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE-EETTEEECSTTTCC---------
T ss_pred CCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC-cCCCEEEEeccCCc---------
Confidence 34456778889999999999999999999988754 4433 366777 899999 89999999999974
Q ss_pred ccccHHHHHHHHHHHHHHHhccC
Q 013890 311 RVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 311 ~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
.++..|..||++||.+|.+..
T Consensus 356 --~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 356 --KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHT
T ss_pred --cCHHHHHHHHHHHHHHHHHHc
Confidence 357789999999999998765
No 85
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=5.1e-32 Score=278.63 Aligned_cols=300 Identities=16% Similarity=0.165 Sum_probs=197.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
.+||+|||||+||++||..|+++|++ |+|||+++..... +... ..+|++.. .....+++.+
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~---Vtlie~~~~~GG~-------~~~~---~~~pg~~~------~~~~~~~~~~ 449 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYT---VHLTDTAEKIGGH-------LNQV---AALPGLGE------WSYHRDYRET 449 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSTTTT-------HHHH---TTSTTCGG------GHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCcCCe-------eeec---ccCCChHH------HHHHHHHHHH
Confidence 57999999999999999999999986 9999998653211 0000 11122110 0111111111
Q ss_pred CCcEEE--cCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCccc-----ccCCCCCCCC--CCCEEEEeCHHHHHHHH
Q 013890 85 KGIELI--LSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLR-----LTDFGVEGAD--AKNIFYLREIDDADKLV 155 (434)
Q Consensus 85 ~~v~~~--~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~-----p~~~~i~g~~--~~~v~~~~~~~~~~~l~ 155 (434)
.++.+ .+.....+.. ++.+...++..+.||+||||||+.|.. |..+.++|.+ ..++++.. ++..
T Consensus 450 -~i~~~~~~~~~~v~i~~-~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~---~~l~-- 522 (729)
T 1o94_A 450 -QITKLLKKNKESQLALG-QKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPE---QVMD-- 522 (729)
T ss_dssp -HHHHHHHHSTTCEEECS-CCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHH---HHHH--
T ss_pred -HHHHhhcccCCceEEEe-CeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHH---HHhc--
Confidence 01100 0111222222 233444444568899999999998532 2222367665 55677532 2211
Q ss_pred HHHHhcCCCcEEEEC--CCHHHHHHHHHHHHCCCeEEEEeeCCccCCc-ccCHHHHHHHHHHHHHcCcEEEcCCeEEEEE
Q 013890 156 EAIKAKKNGKAVVVG--GGYIGLELSAALKINNIDVSMVYPEPWCMPR-LFTADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 156 ~~l~~~~~~~vvVvG--~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~ 232 (434)
. ....+++++||| +|++|+|+|..|.+.|.+|+++++.+ +++. .++.. ...+.+.++++||++++++.+.++.
T Consensus 523 ~--~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~ 598 (729)
T 1o94_A 523 G--KKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIE 598 (729)
T ss_dssp C--CSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEE
T ss_pred C--CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEE
Confidence 1 122568999998 99999999999999999999999988 5432 12222 4567788899999999999999997
Q ss_pred ecCCCcEEEEEeCCC-cE------------------EEcCEEEEccCCccChhhhhccccccCCcEEeCCCCCCCCCceE
Q 013890 233 TNADGEVNEVKLKDG-RT------------------LEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVY 293 (434)
Q Consensus 233 ~~~~g~~~~v~~~~g-~~------------------i~~d~vv~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~iy 293 (434)
. ++........++ ++ +++|.||+|+|++|+++++.. +. ..+|+++||++|+||
T Consensus 599 ~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~-l~-----~~vd~~~~t~~~~Vy 670 (729)
T 1o94_A 599 P--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNE-LK-----ARESEWAENDIKGIY 670 (729)
T ss_dssp T--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHH-HH-----HTGGGTGGGTCCEEE
T ss_pred C--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHH-Hh-----hhcccccccCCCCeE
Confidence 5 332111111233 22 999999999999999987652 11 126889999999999
Q ss_pred EecccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeecCcceEEee
Q 013890 294 AVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYG 360 (434)
Q Consensus 294 a~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~G 360 (434)
|+|||+.. ..+..|..||+.||.+|.+.. .+..+|+ ++..+++.+..+|
T Consensus 671 AiGD~~~~-----------~~~~~A~~~G~~aA~~i~~~l------~~~~~p~-~~~~~~~~~~~~~ 719 (729)
T 1o94_A 671 LIGDAEAP-----------RLIADATFTGHRVAREIEEAN------PQIAIPY-KRETIAWGTPHMP 719 (729)
T ss_dssp ECGGGTSC-----------CCHHHHHHHHHHHHHTTTSSC------TTSCCCC-CCCCCCTTCCSST
T ss_pred EEeCccch-----------hhHHHHHHHHHHHHHHhhhhc------ccCCCCe-eeecccCcccccC
Confidence 99999962 457789999999999998753 3455676 6667776655444
No 86
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=4.8e-32 Score=277.84 Aligned_cols=281 Identities=18% Similarity=0.171 Sum_probs=200.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
..+||+|||||+||++||..|+++|++ |+|||+++..... +.. ...+|++... ..........+.
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~---V~liE~~~~~GG~-------~~~---~~~~p~~~~~--~~~~~~~~~~~~ 454 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYD---VVLAEAGRDLGGR-------VTQ---ESALPGLSAW--GRVKEYREAVLA 454 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSSCTH-------HHH---HHTSTTCGGG--GHHHHHHHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCCCCCE-------eee---ccCCCchhHH--HHHHHHHHHHHH
Confidence 458999999999999999999999987 9999998653321 000 0111111100 000112234445
Q ss_pred HC-CcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcc--------cccCCCCCCCCCCCEEEEeCHHHHHHH
Q 013890 84 EK-GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVL--------RLTDFGVEGADAKNIFYLREIDDADKL 154 (434)
Q Consensus 84 ~~-~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~--------~p~~~~i~g~~~~~v~~~~~~~~~~~l 154 (434)
+. +++++.++.++ ..+..++.||+||+|||+.|+ .|+ ++|.+..++++. .+....
T Consensus 455 ~~~gv~~~~~~~v~----------~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~---i~G~~~~~v~~~---~~~l~~ 518 (690)
T 3k30_A 455 ELPNVEIYRESPMT----------GDDIVEFGFEHVITATGATWRTDGVARFHTTA---LPIAEGMQVLGP---DDLFAG 518 (690)
T ss_dssp TCTTEEEESSCCCC----------HHHHHHTTCCEEEECCCEEECSSCCSSSCSSC---CCBCTTSEEECH---HHHHTT
T ss_pred HcCCCEEEECCeec----------HHHHhhcCCCEEEEcCCCccccccccccCCCC---CCCCCCCcEEcH---HHHhCC
Confidence 55 88888775432 223455789999999999854 444 566655555532 222111
Q ss_pred HHHHHhcCCCcEEEEC--CCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEE
Q 013890 155 VEAIKAKKNGKAVVVG--GGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 155 ~~~l~~~~~~~vvVvG--~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~ 232 (434)
....+++++||| +|++|+|+|..|.+.|.+|+++++.+.+++...++.....+.+.+++.||+++++++|++++
T Consensus 519 ----~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~ 594 (690)
T 3k30_A 519 ----RLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVG 594 (690)
T ss_dssp ----CCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEE
T ss_pred ----CCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEE
Confidence 122467899999 99999999999999999999999998877754446667888899999999999999999997
Q ss_pred ecCCCcEEEEE---eCCCcEEEcCEEEEccCCccChhhhhccccccCCcEEeCCCCCCCCCceEEecccccccccccCcc
Q 013890 233 TNADGEVNEVK---LKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREM 309 (434)
Q Consensus 233 ~~~~g~~~~v~---~~~g~~i~~d~vv~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~ 309 (434)
. ++ ..+. ..+++++++|.||+|+|++|+++++...... +. +|+.|+|||+|||+..
T Consensus 595 ~--~~--~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~~--~~-------~t~~~~VyaiGD~~~~-------- 653 (690)
T 3k30_A 595 A--GG--VTVRDTYASIERELECDAVVMVTARLPREELYLDLVAR--RD-------AGEIASVRGIGDAWAP-------- 653 (690)
T ss_dssp T--TE--EEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHHH--HH-------HTSCSEEEECGGGTSC--------
T ss_pred C--Ce--EEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhhh--hc-------ccCCCCEEEEeCCCch--------
Confidence 5 33 2233 2355689999999999999999876432111 11 7899999999999974
Q ss_pred cccccHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 013890 310 RRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDY 343 (434)
Q Consensus 310 ~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~ 343 (434)
..+..|..||+.||.||.+.+.+.++.+|..
T Consensus 654 ---~~~~~A~~~g~~aa~~i~~~l~g~~~~p~~~ 684 (690)
T 3k30_A 654 ---GTIAAAVWSGRRAAEEFDAVLPSNDEVPFRR 684 (690)
T ss_dssp ---BCHHHHHHHHHHHHHHTTCCCCCTTSCSSCC
T ss_pred ---hhHHHHHHHHHHHHHHHHhhccCCCCCCcCh
Confidence 3466799999999999999877655555554
No 87
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=7.9e-30 Score=249.15 Aligned_cols=287 Identities=11% Similarity=0.080 Sum_probs=191.4
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--CCCCCccc---------------cccC--------C
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--YERPALSK---------------AYLF--------P 57 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~--~~~~~~~~---------------~~~~--------~ 57 (434)
++.+||+|||||++|+++|..|++.|. ..+|+|||+.+... |....... .+.. .
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~-~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKA-FDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTC-CSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCC-CCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 456899999999999999999999987 12399999986431 11110000 0000 0
Q ss_pred CC----CC-------CCCCcceecCCCC-------CCCCHhHHHHCCcEEEcCCeEEEEeCCCC--EEEcCC---Cc---
Q 013890 58 EG----TA-------RLPGFHVCVGSGG-------ERLLPEWYKEKGIELILSTEIVRADIASK--TLLSAT---GL--- 111 (434)
Q Consensus 58 ~~----~~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~---~~--- 111 (434)
.. .. .++++........ ...+.++.++.+..++.+++|+.++...+ .|++.+ +.
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 00 00 0000000000000 00112223334667888899999987655 455544 55
Q ss_pred EEEeceEEEccCC--CcccccCCCCCCCC------CCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHH
Q 013890 112 IFKYQILVIATGS--TVLRLTDFGVEGAD------AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALK 183 (434)
Q Consensus 112 ~~~~d~lilAtG~--~~~~p~~~~i~g~~------~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~ 183 (434)
++.||+||+|||. .|..|+ ++|.+ ...++++.++.+...+ .+++++|||+|++|+|+|..|+
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~---i~G~~~~~~~~~g~v~~~~~~~~~~~~-------~~k~VvVvG~G~sg~e~A~~l~ 232 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPN---IKGLDEYAKAVPGSVLHSSLFREPELF-------VGESVLVVGGASSANDLVRHLT 232 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCC---CBTHHHHHHHSTTSEEEGGGCCCGGGG-------TTCCEEEECSSHHHHHHHHHHT
T ss_pred EEEeCEEEECCCCCCCCCCCC---CCChhhhhccCCccEEEecccCChhhc-------CCCEEEEEccCcCHHHHHHHHH
Confidence 7999999999998 777776 45532 1346665554433222 5899999999999999999999
Q ss_pred HCCCe-EEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcE-EEcCEEEEccCC
Q 013890 184 INNID-VSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRT-LEADIVVVGVGG 261 (434)
Q Consensus 184 ~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~-i~~d~vv~a~G~ 261 (434)
+.+.+ |+++.+.+.+ +++.||++ ...|+++.. ++. .|.+.||+. +++|.||+|||+
T Consensus 233 ~~~~~~V~l~~r~~~~----------------l~~~~i~~--~~~v~~~~~--~~~--~v~~~dG~~~~~~D~vi~atG~ 290 (447)
T 2gv8_A 233 PVAKHPIYQSLLGGGD----------------IQNESLQQ--VPEITKFDP--TTR--EIYLKGGKVLSNIDRVIYCTGY 290 (447)
T ss_dssp TTSCSSEEEECTTCCS----------------CBCSSEEE--ECCEEEEET--TTT--EEEETTTEEECCCSEEEECCCB
T ss_pred HHhCCcEEEEeCCCCc----------------CCCCCeEE--ecCeEEEec--CCC--EEEECCCCEeccCCEEEECCCC
Confidence 99999 9999988755 34457774 467888864 222 578899976 689999999999
Q ss_pred ccChhh-----hhcc-ccc-cCCcEEeCCCCC---CCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhc
Q 013890 262 RPLISL-----FKGQ-VAE-NKGGIETDDFFK---TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMA 331 (434)
Q Consensus 262 ~p~~~~-----~~~~-~~~-~~g~i~vd~~~~---t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 331 (434)
+|++++ ++.. ... .++.+.++.+.+ +++|+||++||+... ..+..|..||+.+|+++.+
T Consensus 291 ~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~-----------~~~~~a~~qa~~~a~~~~g 359 (447)
T 2gv8_A 291 LYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHV-----------VPFPTSQAQAAFLARVWSG 359 (447)
T ss_dssp CCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSS-----------CHHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEeccccc-----------cCchHHHHHHHHHHHHHcC
Confidence 999988 5431 111 234455555555 689999999999864 2467788999999999987
Q ss_pred cC
Q 013890 332 TE 333 (434)
Q Consensus 332 ~~ 333 (434)
..
T Consensus 360 ~~ 361 (447)
T 2gv8_A 360 RL 361 (447)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 88
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=2.1e-29 Score=257.61 Aligned_cols=259 Identities=18% Similarity=0.215 Sum_probs=185.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
.+||+|||||+||++||..|+++|++ |+|||+++..++.. ... ..+|+..... .....+.+++++
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~---V~lie~~~~~gg~~-~~~---------~~~~~~~~~~--~~~~~~~~~~~~ 437 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQ---VTLFDAHSEIGGQF-NIA---------KQIPGKEEFY--ETLRYYRRMIEV 437 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSSCTTH-HHH---------TTSTTCTTHH--HHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCCCCee-ecc---------ccCCCHHHHH--HHHHHHHHHHHH
Confidence 58999999999999999999999876 99999987543220 000 0111110000 000123455667
Q ss_pred CCcEEEcCCeEEEEeCCCCEEEcCCCcEE-EeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCC
Q 013890 85 KGIELILSTEIVRADIASKTLLSATGLIF-KYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKN 163 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~-~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~ 163 (434)
.+++++.++.+.. ..+ .||+||||||++|..|+ ++|.+..++++.. +. +.. ....+
T Consensus 438 ~gv~~~~~~~v~~-------------~~~~~~d~lviAtG~~p~~~~---i~G~~~~~v~~~~---~~--l~~--~~~~~ 494 (671)
T 1ps9_A 438 TGVTLKLNHTVTA-------------DQLQAFDETILASGIVPRTPP---IDGIDHPKVLSYL---DV--LRD--KAPVG 494 (671)
T ss_dssp HTCEEEESCCCCS-------------SSSCCSSEEEECCCEEECCCC---CBTTTSTTEEEHH---HH--HTS--CCCCC
T ss_pred cCCEEEeCcEecH-------------HHhhcCCEEEEccCCCcCCCC---CCCCCCCcEeeHH---HH--hhC--CCCCC
Confidence 8999998865431 113 89999999999998887 5666556777542 11 110 11257
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-------------------------------------eEEEEeeCCccCCcccCHH
Q 013890 164 GKAVVVGGGYIGLELSAALKINNI-------------------------------------DVSMVYPEPWCMPRLFTAD 206 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~-------------------------------------~v~~~~~~~~~~~~~~~~~ 206 (434)
++++|||+|++|+|+|..|++.|. +|+++.+.+..+...+++.
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~ 574 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKT 574 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTT
T ss_pred CeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccc
Confidence 899999999999999999998774 4566766665555456777
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCC--cEEEcCEEEEccCCccChhhhhccccccCCcEEeCCC
Q 013890 207 IAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDG--RTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDF 284 (434)
Q Consensus 207 ~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g--~~i~~d~vv~a~G~~p~~~~~~~~~~~~~g~i~vd~~ 284 (434)
....+.+.+++.||++++++.+++++. ++ ..+. .+| +++++|.||+|+|++|+++++...
T Consensus 575 ~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~--v~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l------------- 636 (671)
T 1ps9_A 575 TGWIHRTTLLSRGVKMIPGVSYQKIDD--DG--LHVV-INGETQVLAVDNVVICAGQEPNRALAQPL------------- 636 (671)
T ss_dssp THHHHHHHHHHTTCEEECSCEEEEEET--TE--EEEE-ETTEEEEECCSEEEECCCEEECCTTHHHH-------------
T ss_pred cHHHHHHHHHhcCCEEEeCcEEEEEeC--Ce--EEEe-cCCeEEEEeCCEEEECCCccccHHHHHHH-------------
Confidence 778888999999999999999999974 33 2232 567 579999999999999998876421
Q ss_pred CCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHH
Q 013890 285 FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTI 329 (434)
Q Consensus 285 ~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 329 (434)
+...++||++|||+.... ..+..|.+||..+|.||
T Consensus 637 -~~~g~~v~aiGD~~~~~~---------~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 637 -IDSGKTVHLIGGCDVAME---------LDARRAIAQGTRLALEI 671 (671)
T ss_dssp -HTTTCCEEECGGGTCCSS---------CCHHHHHHHHHHHHHHC
T ss_pred -HhcCCCEEEECCcCccCc---------hhHHHHHHHHHHHHHhC
Confidence 122479999999997643 35888999999999985
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.96 E-value=8e-29 Score=245.97 Aligned_cols=299 Identities=16% Similarity=0.194 Sum_probs=188.0
Q ss_pred cCcEEEECCCHHHHHHHHHHH-HcCCCCCcEEEEeCCCCCC-------CCCC---CccccccCCCCCC--CCCCcc--ee
Q 013890 5 SFKYVILGGGVSAGYAAREFA-KQGVKPGELAIISKEAVAP-------YERP---ALSKAYLFPEGTA--RLPGFH--VC 69 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~-~~g~~~~~V~vie~~~~~~-------~~~~---~~~~~~~~~~~~~--~~~~~~--~~ 69 (434)
.+||+|||||++|+++|..|+ +.|++ |+|||+++..+ |..+ ..+..+....... ..+.+. ..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~---v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 84 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLT---TVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYI 84 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCC---EEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCC---EEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCC
Confidence 589999999999999999999 88876 99999986432 1110 0000000000000 000000 00
Q ss_pred cCCCCCCCCHhHHHHCCc--EEEcCCeEEEEeCCCC----EEEcCCCcEEEeceEEEccC--CCcccccCCCCCCCCCCC
Q 013890 70 VGSGGERLLPEWYKEKGI--ELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVLRLTDFGVEGADAKN 141 (434)
Q Consensus 70 ~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~lilAtG--~~~~~p~~~~i~g~~~~~ 141 (434)
..........+..++.++ +++.+++|+.++.+.+ +|.+.+|+++.||+||+||| +.|..|+.+|++.... .
T Consensus 85 ~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g-~ 163 (540)
T 3gwf_A 85 TQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEG-E 163 (540)
T ss_dssp EHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCS-E
T ss_pred CHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCC-C
Confidence 000001123344556777 7888899999987665 67888888999999999999 6888887544332222 2
Q ss_pred EEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc-CCc---ccCHHHHHHHH-----
Q 013890 142 IFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC-MPR---LFTADIAAFYE----- 212 (434)
Q Consensus 142 v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~-~~~---~~~~~~~~~~~----- 212 (434)
+++.....+. ....+++++|||+|.+|+|+|..|++.+.+|+++.|.+.+ ++. .+.+...+.++
T Consensus 164 ~~~~~~~~~~-------~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~ 236 (540)
T 3gwf_A 164 TIHTAAWPEG-------KSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDR 236 (540)
T ss_dssp EEEGGGCCSS-------CCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHH
T ss_pred EEEeecCCCc-------cccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHH
Confidence 2332221111 0125899999999999999999999999999999999873 222 11222221111
Q ss_pred --------------------------------------------------------------------HH----------
Q 013890 213 --------------------------------------------------------------------GY---------- 214 (434)
Q Consensus 213 --------------------------------------------------------------------~~---------- 214 (434)
+.
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~ 316 (540)
T 3gwf_A 237 IWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPET 316 (540)
T ss_dssp HHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHH
T ss_pred HHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 00
Q ss_pred -----------------------HHHcCcEEEc--CCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhhh
Q 013890 215 -----------------------YANKGIKIIK--GTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLFK 269 (434)
Q Consensus 215 -----------------------l~~~gV~~~~--~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~ 269 (434)
+.+.+|+++. +..|++|.. + +|.++||+++++|.||+|||+++++..+.
T Consensus 317 ~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~--~----gv~~~dG~~~~~DvIV~ATGf~~~~~~~~ 390 (540)
T 3gwf_A 317 ARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTA--K----GVVTEDGVLHELDVLVFATGFDAVDGNYR 390 (540)
T ss_dssp HHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECS--S----EEEETTCCEEECSEEEECCCBSCSSHHHH
T ss_pred HHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEec--C----eEEcCCCCEEECCEEEECCccCccccCcC
Confidence 0134788885 678888865 2 58899999999999999999999985442
Q ss_pred c-cccccCCcEEeCC----------CCCC-CCCceEEe-cccccccccccCcccccccHHHHHHHHHHHHHHHhc
Q 013890 270 G-QVAENKGGIETDD----------FFKT-SADDVYAV-GDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMA 331 (434)
Q Consensus 270 ~-~~~~~~g~i~vd~----------~~~t-~~~~iya~-Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 331 (434)
. .+. ..+++.+++ .+.+ +.||+|.+ |..+. .. .....+..|++.+++.|..
T Consensus 391 ~~~i~-g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~-~~---------s~~~~~e~q~~~i~~~i~~ 454 (540)
T 3gwf_A 391 RIEIR-GRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGP-FT---------NLPPSIETQVEWISDTIGY 454 (540)
T ss_dssp TSEEE-CGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCB-CS---------CHHHHHHHHHHHHHHHHHH
T ss_pred cceEE-CCCCcCHHHhhccChhhccccccCCCCceEEEecCCCC-Cc---------cHHHHHHHHHHHHHHHHHH
Confidence 1 111 122233332 2233 78999999 76654 11 2345566788888877653
No 90
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.94 E-value=6.4e-27 Score=232.74 Aligned_cols=184 Identities=16% Similarity=0.176 Sum_probs=120.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC-------CCCC---CccccccCCCCCC--CCCCccee--
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP-------YERP---ALSKAYLFPEGTA--RLPGFHVC-- 69 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~-------~~~~---~~~~~~~~~~~~~--~~~~~~~~-- 69 (434)
..+||+|||||++|+++|..|++.|++ |+|||+++... |..+ ..+..+....... ..+.+...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~ 96 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLT---VRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYA 96 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSC
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCC---EEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCC
Confidence 458999999999999999999999886 99999976432 1100 0011010000000 00000000
Q ss_pred cCCCCCCCCHhHHHHCCc--EEEcCCeEEEEeCCCC----EEEcCCCcEEEeceEEEccC--CCcccccCCCCCCCCCCC
Q 013890 70 VGSGGERLLPEWYKEKGI--ELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVLRLTDFGVEGADAKN 141 (434)
Q Consensus 70 ~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~lilAtG--~~~~~p~~~~i~g~~~~~ 141 (434)
..........+..++.++ +++.+++|+.++.+.+ +|.+.+|.++.||+||+||| +.|..|+++|++... ..
T Consensus 97 ~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~-g~ 175 (549)
T 4ap3_A 97 TQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFT-GD 175 (549)
T ss_dssp BHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCC-SE
T ss_pred CHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCC-Cc
Confidence 000001122334556676 7888999999987665 78888888999999999999 788888854433222 22
Q ss_pred EEEEeCHH-HHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 142 IFYLREID-DADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 142 v~~~~~~~-~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
+++..... +... ..+++++|||+|.+|+|+|..|++.+.+|+++.|.+.+
T Consensus 176 ~~~~~~~~~~~~~-------~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 176 IVHTARWPHDGVD-------FTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp EEEGGGCCTTCCC-------CBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred eEEeccccccccc-------cCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 33322211 1111 25899999999999999999999999999999999874
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.94 E-value=6.1e-27 Score=232.68 Aligned_cols=191 Identities=14% Similarity=0.092 Sum_probs=116.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC-------CCC--CCccccccCCC-CCCCC--CCcceec-
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP-------YER--PALSKAYLFPE-GTARL--PGFHVCV- 70 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~-------~~~--~~~~~~~~~~~-~~~~~--~~~~~~~- 70 (434)
..+||||||||++|+++|..|++.|++ |+|||+++..+ |.. +.......... ..... +.+....
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~---v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~ 84 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMK---VLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFA 84 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCC
Confidence 358999999999999999999999886 99999986532 100 00000000000 00000 0000000
Q ss_pred -CCCCCCCCHhHHHHCCc--EEEcCCeEEEEeCCCC----EEEcCCCcEEEeceEEEccC--CCcccccCCCCCCCCCCC
Q 013890 71 -GSGGERLLPEWYKEKGI--ELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVLRLTDFGVEGADAKN 141 (434)
Q Consensus 71 -~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~lilAtG--~~~~~p~~~~i~g~~~~~ 141 (434)
............++.++ .+..+++|+.++.+.+ .|.+.+++++.||+||+||| +.|..|+++|++......
T Consensus 85 ~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~ 164 (545)
T 3uox_A 85 SQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGES 164 (545)
T ss_dssp BHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSEE
T ss_pred CHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCCe
Confidence 00001122333445566 7888889999987655 78888888999999999999 788888854443322222
Q ss_pred EEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 142 IFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 142 v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
+++.....+.....+ .....+++++|||+|.+|+|+|..|++.+.+|+++.|.+.+
T Consensus 165 ~h~~~~~~~~~~~~~-~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 165 FHSSRWPTDAEGAPK-GVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp EEGGGCCBCTTSCBS-CCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred EEccccccccccccc-ccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 222221111000000 00125799999999999999999999999999999999874
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.93 E-value=1.1e-25 Score=224.58 Aligned_cols=302 Identities=13% Similarity=0.147 Sum_probs=180.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC---CCCccccccCCCCCCCCC---------Ccceec-
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE---RPALSKAYLFPEGTARLP---------GFHVCV- 70 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~---~~~~~~~~~~~~~~~~~~---------~~~~~~- 70 (434)
..+||+|||||++|+++|..|++.|++ |+|||+++..+.. .+.....+........+. .+....
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~ 91 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRS---VHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYA 91 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccC
Confidence 458999999999999999999999986 9999998653210 000000000000000000 000000
Q ss_pred -CCCCCCCCHhHHHHCC--cEEEcCCeEEEEeCCCC----EEEcCCCcEEEeceEEEccC--CCcccccCCCCCCCCCCC
Q 013890 71 -GSGGERLLPEWYKEKG--IELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVLRLTDFGVEGADAKN 141 (434)
Q Consensus 71 -~~~~~~~~~~~~~~~~--v~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~lilAtG--~~~~~p~~~~i~g~~~~~ 141 (434)
............++.+ .++..+++|..++.+.. +|.+.+|+++.+|+||+||| +.|..|+.+|++... ..
T Consensus 92 ~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~-G~ 170 (542)
T 1w4x_A 92 SQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFA-GN 170 (542)
T ss_dssp BHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCC-SE
T ss_pred CHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCC-Cc
Confidence 0000011122233444 56888899999876442 57777888899999999999 567777743332221 12
Q ss_pred EEEEeCHH-HHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC-Cc---ccCHHHH--------
Q 013890 142 IFYLREID-DADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-PR---LFTADIA-------- 208 (434)
Q Consensus 142 v~~~~~~~-~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~-~~---~~~~~~~-------- 208 (434)
+++..... +.. ...+++++|||+|.+|+|++..+++.+.+|+++.|.+.+. +. .+.+...
T Consensus 171 ~~hs~~~~~~~~-------~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p 243 (542)
T 1w4x_A 171 LYHTGNWPHEPV-------DFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYA 243 (542)
T ss_dssp EEEGGGCCSSCC-------CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHH
T ss_pred eEECCCCCCchh-------ccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCH
Confidence 23221111 100 1258999999999999999999999999999999887652 21 0111111
Q ss_pred ---------------------------------------------------------------HHHHHHH----------
Q 013890 209 ---------------------------------------------------------------AFYEGYY---------- 215 (434)
Q Consensus 209 ---------------------------------------------------------------~~~~~~l---------- 215 (434)
+.+++.+
T Consensus 244 ~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (542)
T 1w4x_A 244 EFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVA 323 (542)
T ss_dssp HHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHH
T ss_pred HHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 0011111
Q ss_pred -------------------------HHcCcEEE--cCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhh
Q 013890 216 -------------------------ANKGIKII--KGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 216 -------------------------~~~gV~~~--~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~ 268 (434)
.+.+|+++ .+..|+++.. .+|.++| +++++|.||+|||+++++.++
T Consensus 324 ~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~------~gv~~~d-~~~~~D~ii~atG~~~~~~~~ 396 (542)
T 1w4x_A 324 ERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITP------RGVRTSE-REYELDSLVLATGFDALTGAL 396 (542)
T ss_dssp HHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECS------SEEEESS-CEEECSEEEECCCCCCTTHHH
T ss_pred HhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcC------CeEEeCC-eEEecCEEEEcCCccccccCc
Confidence 11346665 3567778754 2578888 899999999999999987765
Q ss_pred hccccc-cCCcEEeCCCCC----------C-CCCceEEe-cccccccccccCcccccccH-HHHHHHHHHHHHHHhccC
Q 013890 269 KGQVAE-NKGGIETDDFFK----------T-SADDVYAV-GDVATFPMKLYREMRRVEHV-DHARKSAEQAVKTIMATE 333 (434)
Q Consensus 269 ~~~~~~-~~g~i~vd~~~~----------t-~~~~iya~-Gd~~~~~~~~~~~~~~~~~~-~~A~~~g~~aa~~i~~~~ 333 (434)
.. +.. ..+++.+++..+ + +.||+|++ |+.+... .+++ ..|..|++.++++|....
T Consensus 397 ~~-~~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~---------~~~~~~~~e~q~~~ia~~i~~~~ 465 (542)
T 1w4x_A 397 FK-IDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSA---------LSNMLVSIEQHVEWVTDHIAYMF 465 (542)
T ss_dssp HT-SEEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGG---------GSCHHHHHHHHHHHHHHHHHHHH
T ss_pred Cc-eeeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcc---------cccHHHHHHHHHHHHHHHHHHHH
Confidence 43 222 223444443222 2 56677766 6665311 1344 678889999999987543
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.91 E-value=2.6e-23 Score=177.19 Aligned_cols=158 Identities=19% Similarity=0.169 Sum_probs=131.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc--------cc-----CHHHHHHHHHHHHHcCcEEEcCCeEEEE
Q 013890 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR--------LF-----TADIAAFYEGYYANKGIKIIKGTVAVGF 231 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~--------~~-----~~~~~~~~~~~l~~~gV~~~~~~~v~~i 231 (434)
+++|||+|++|+++|..|.+.|.+|+++++.+..+.. .+ ++++.+.+.+.+++.||+++.+ +++++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 6899999999999999999999999999988765521 12 4788999999999999999999 99999
Q ss_pred EecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhhhccccccCCcEEeCCCCCCCCCceEEecccccccccccCcccc
Q 013890 232 TTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRR 311 (434)
Q Consensus 232 ~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~ 311 (434)
+.++++ ..+.+++| ++++|.||+|+|.+|+.. -..++..++|.|.||+++||+.|+|||+|||+..+.
T Consensus 82 ~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~~~~-~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~~~-------- 149 (180)
T 2ywl_A 82 RDMGGV--FEVETEEG-VEKAERLLLCTHKDPTLP-SLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGKVP-------- 149 (180)
T ss_dssp EECSSS--EEEECSSC-EEEEEEEEECCTTCCHHH-HHHTCCEETTEECCCTTCBCSSTTEEECGGGGTCCS--------
T ss_pred EEcCCE--EEEEECCC-EEEECEEEECCCCCCCcc-ccCCCCccCceEEeCCCCCcCCCCEEEeecccCcch--------
Confidence 874333 56788888 899999999999998641 123444457889999999999999999999998653
Q ss_pred cccHHHHHHHHHHHHHHHhccCCCC
Q 013890 312 VEHVDHARKSAEQAVKTIMATEGGK 336 (434)
Q Consensus 312 ~~~~~~A~~~g~~aa~~i~~~~~~~ 336 (434)
+++..|..||+.||.||.+...+.
T Consensus 150 -~~~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 150 -GHAIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred -hhHHHHHHhHHHHHHHHHHHhhhc
Confidence 367889999999999999865543
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.86 E-value=1.4e-19 Score=178.45 Aligned_cols=289 Identities=12% Similarity=0.069 Sum_probs=165.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCC-----------CCcEEEEeCCCCCCCCCCCcccc-cc---------CCCCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVK-----------PGELAIISKEAVAPYERPALSKA-YL---------FPEGTARL 63 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~-----------~~~V~vie~~~~~~~~~~~~~~~-~~---------~~~~~~~~ 63 (434)
.|||||||+||+||++|+.|.+.+.+ ....+.+|+.+.+.|+..++..+ .+ ....+...
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~ 118 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSS 118 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCc
Confidence 58999999999999999999886432 12367899998777654332111 00 00000000
Q ss_pred CCc---ce--------ecCCC------CCCCCHhHH-HHCCcEEEcCCeEEEEeCCC----------CEEEcCCC-----
Q 013890 64 PGF---HV--------CVGSG------GERLLPEWY-KEKGIELILSTEIVRADIAS----------KTLLSATG----- 110 (434)
Q Consensus 64 ~~~---~~--------~~~~~------~~~~~~~~~-~~~~v~~~~~~~v~~i~~~~----------~~v~~~~~----- 110 (434)
-.| .. ..... +...+.+|+ ++.+..+.++++|+++.+.. -+|++.++
T Consensus 119 ~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~ 198 (501)
T 4b63_A 119 FTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEI 198 (501)
T ss_dssp TSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCE
T ss_pred cchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceE
Confidence 000 00 00000 011122222 23456688888999886432 13444332
Q ss_pred cEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHH-HhcCCCcEEEECCCHHHHHHHHHHHHC--CC
Q 013890 111 LIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI-KAKKNGKAVVVGGGYIGLELSAALKIN--NI 187 (434)
Q Consensus 111 ~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l-~~~~~~~vvVvG~g~~g~e~a~~l~~~--g~ 187 (434)
.++.+++||+|||..|.+|.. .... ..+++...+.+... ... ....+|+|+|||+|.+|+|++..|++. +.
T Consensus 199 ~~~~ar~vVlatG~~P~iP~~---~~~~-g~v~Hss~y~~~~~--~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~ 272 (501)
T 4b63_A 199 SARRTRKVVIAIGGTAKMPSG---LPQD-PRIIHSSKYCTTLP--ALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNS 272 (501)
T ss_dssp EEEEEEEEEECCCCEECCCTT---SCCC-TTEEEGGGHHHHHH--HHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTC
T ss_pred EEEEeCEEEECcCCCCCCCCC---CCCC-cceeeccccccchh--hccccccCCcEEEEECCcHHHHHHHHHHHhcCCCc
Confidence 468999999999998888874 3332 45776554433211 111 123689999999999999999999864 78
Q ss_pred eEEEEeeCCccCCc--------ccCHH-------------------------------HHHHHHHHHHH----------c
Q 013890 188 DVSMVYPEPWCMPR--------LFTAD-------------------------------IAAFYEGYYAN----------K 218 (434)
Q Consensus 188 ~v~~~~~~~~~~~~--------~~~~~-------------------------------~~~~~~~~l~~----------~ 218 (434)
+|+++.|++.+.+. .+.++ +...+.+.+-+ .
T Consensus 273 ~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~ 352 (501)
T 4b63_A 273 RTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQW 352 (501)
T ss_dssp EEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGC
T ss_pred eEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCccccc
Confidence 99999998765432 11111 11111111111 0
Q ss_pred CcEEEcCCeEEEEEecCC-CcE-----------EEEEeCCCcEEEcCEEEEccCCccChhh-hhc---cccc-cCCcEEe
Q 013890 219 GIKIIKGTVAVGFTTNAD-GEV-----------NEVKLKDGRTLEADIVVVGVGGRPLISL-FKG---QVAE-NKGGIET 281 (434)
Q Consensus 219 gV~~~~~~~v~~i~~~~~-g~~-----------~~v~~~~g~~i~~d~vv~a~G~~p~~~~-~~~---~~~~-~~g~i~v 281 (434)
...+..+..+..+..... +++ .++.+.+|+++++|.||+|||++|+... +.. .+.. .+|.+.|
T Consensus 353 ~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v 432 (501)
T 4b63_A 353 QHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKP 432 (501)
T ss_dssp SSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCB
T ss_pred ceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeee
Confidence 123555555555543221 111 2345678899999999999999988642 221 2222 5677888
Q ss_pred CCCCCC--------CCCceEEecccc
Q 013890 282 DDFFKT--------SADDVYAVGDVA 299 (434)
Q Consensus 282 d~~~~t--------~~~~iya~Gd~~ 299 (434)
+..++. ..++||+.|-+-
T Consensus 433 ~rdy~~~~~~~~~~~~~~i~~qg~~~ 458 (501)
T 4b63_A 433 HRDYRVEMDPSKVSSEAGIWLQGCNE 458 (501)
T ss_dssp CTTSBBCCCTTTBCTTCEEEECSCCH
T ss_pred CCCcEEeecCCccCCCceEEecCCCc
Confidence 876543 246799998443
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.75 E-value=5.3e-20 Score=180.09 Aligned_cols=221 Identities=12% Similarity=0.070 Sum_probs=127.0
Q ss_pred HHHCCcEEEcCCeEEEEeCCCCEE---EcC-CCcEEEeceEEEccCCCcccccCCC-CCCCCCCCEEEEeCHHHHHHHHH
Q 013890 82 YKEKGIELILSTEIVRADIASKTL---LSA-TGLIFKYQILVIATGSTVLRLTDFG-VEGADAKNIFYLREIDDADKLVE 156 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~~~v---~~~-~~~~~~~d~lilAtG~~~~~p~~~~-i~g~~~~~v~~~~~~~~~~~l~~ 156 (434)
+++.+++++.++.+ ++..+++.+ ... ++.++.+|.+|+|||+.+..++... -++... +....+.+.-.
T Consensus 129 ~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tG------dgi~~a~~aGa 201 (472)
T 2e5v_A 129 AREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSSTQSTNIG------DGMAIAFKAGT 201 (472)
T ss_dssp HHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBSSCTTCSC------HHHHHHHHTTC
T ss_pred HHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccccCCCCCch------HHHHHHHHcCC
Confidence 35679999999889 887666543 332 3345789999999999887665311 011111 11111111000
Q ss_pred HHHh---cCC-CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHH--------HHHHHHHHHHHcCcEEEc
Q 013890 157 AIKA---KKN-GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTAD--------IAAFYEGYYANKGIKIIK 224 (434)
Q Consensus 157 ~l~~---~~~-~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~gV~~~~ 224 (434)
.+.. .+. ..++++|+| +++++..+...|..+ +..+.++|++. ++++ +...+.+.+++.|. +++
T Consensus 202 ~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~-~~~~~el~~rd~v~~~i~~~~~~~~~-v~l 276 (472)
T 2e5v_A 202 ILADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-INENGERFLFN-YDKRGELAPRDILSRAIYIEMLKGHK-VFI 276 (472)
T ss_dssp CEECTTCEEEEEEEECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGG-TCTTGGGSCHHHHHHHHHHHHHHTCC-EEE
T ss_pred CEeCCcceEEEeEEEccCCC--ceeeehhhcCCceEE-ECCCCCCCCcc-CCcccCcCchhHHHHHHHHHHHhCCc-EEE
Confidence 0000 001 133455766 788888888899887 77788888865 3433 35666667766653 332
Q ss_pred CCeEEEEEecCCCcEEEEEeCCCcEEE-cCEEEEccCCccChhhhhcc--ccccCCcEEeCCCCCCCCCceEEecccccc
Q 013890 225 GTVAVGFTTNADGEVNEVKLKDGRTLE-ADIVVVGVGGRPLISLFKGQ--VAENKGGIETDDFFKTSADDVYAVGDVATF 301 (434)
Q Consensus 225 ~~~v~~i~~~~~g~~~~v~~~~g~~i~-~d~vv~a~G~~p~~~~~~~~--~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~ 301 (434)
+... + +. +. +.++ .+.++++.|..|+ ++++.. .....|+|.||+++||++|+|||+|||++.
T Consensus 277 d~~~--~----~~------~~--~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~ 341 (472)
T 2e5v_A 277 DLSK--I----ED------FE--RKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDS 341 (472)
T ss_dssp ECTT--C----TT------HH--HHCHHHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEEC
T ss_pred eccc--h----HH------HH--HHhHHHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhccc
Confidence 2210 0 00 00 1233 3667788899998 655432 122579999999999999999999999983
Q ss_pred cccccCccc-ccccHHHHHHHHHHHHHHHhc
Q 013890 302 PMKLYREMR-RVEHVDHARKSAEQAVKTIMA 331 (434)
Q Consensus 302 ~~~~~~~~~-~~~~~~~A~~~g~~aa~~i~~ 331 (434)
.. .+..+ .......+...|+.|++++.+
T Consensus 342 ~~--hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 342 GL--HGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp SS--STTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred cc--CCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 21 11111 011233344456666666543
No 96
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.65 E-value=2e-15 Score=133.54 Aligned_cols=157 Identities=15% Similarity=0.161 Sum_probs=112.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc-----------------CCcc------cCHHHHHHHHHHHHHc-C
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC-----------------MPRL------FTADIAAFYEGYYANK-G 219 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~-----------------~~~~------~~~~~~~~~~~~l~~~-g 219 (434)
.+++|||+|+.|+++|..|++.|.+|+++++.... ...+ ....+.+.+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999999999999986211 1100 0136677888888887 9
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChh--------------------hh----hcccccc
Q 013890 220 IKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLIS--------------------LF----KGQVAEN 275 (434)
Q Consensus 220 V~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~--------------------~~----~~~~~~~ 275 (434)
++++ +++++++.. +++.+..+.+.+|+++.+|.||+|+|..++.. +. +.++...
T Consensus 84 v~i~-~~~v~~i~~-~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~ 161 (232)
T 2cul_A 84 LHLF-QATATGLLL-EGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFV 161 (232)
T ss_dssp EEEE-ECCEEEEEE-ETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEE
T ss_pred cEEE-EeEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEE
Confidence 9999 568999986 35566678888898899999999999844322 21 1122221
Q ss_pred CCc----------------EEeC-------CCCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhcc
Q 013890 276 KGG----------------IETD-------DFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 332 (434)
Q Consensus 276 ~g~----------------i~vd-------~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 332 (434)
.+. ..+. ...+|++|+|||+|||+ .. ..+..|..||+.+|.+|...
T Consensus 162 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~----------g~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 162 EREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-RE----------GDYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp EEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SC----------CCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cC----------ccHHHHHHHHHHHHHHHHhh
Confidence 110 0111 01126899999999999 43 35777899999999999865
Q ss_pred C
Q 013890 333 E 333 (434)
Q Consensus 333 ~ 333 (434)
+
T Consensus 231 l 231 (232)
T 2cul_A 231 L 231 (232)
T ss_dssp C
T ss_pred c
Confidence 3
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1.2e-18 Score=162.75 Aligned_cols=257 Identities=14% Similarity=0.003 Sum_probs=144.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHH--cCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAK--QGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~--~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
.+||+||||||||++||++|++ .|++ |+|||+++.+... ++... ..++.... ......++
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~---V~viEk~~~~GG~-------~~~~~--~~~~~~~l------~~~~~~~~ 126 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESSVAPGGG-------SWLGG--QLFSAMVM------RKPAHLFL 126 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSSSCCTT-------TTCCS--TTCCCEEE------ETTTHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCe---EEEEECCCCCCce-------EEeCC--ccCCHHHH------HHHHHHHH
Confidence 5799999999999999999975 4777 9999998754321 11110 11111111 23445667
Q ss_pred HHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcC
Q 013890 83 KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~ 162 (434)
++.++++..+.. .....+..+++++..+..+..++..-.....+..+...... ...
T Consensus 127 ~e~Gv~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~ 182 (326)
T 3fpz_A 127 QELEIPYEDEGD----------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPT--------EKG 182 (326)
T ss_dssp HHTTCCCEECSS----------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSC--------SSS
T ss_pred HHcCCEEEECCc----------------ceecceeEEEEcchhhhccccccceeecccccceeeccCCc--------ccC
Confidence 778887655421 12334445566666655555322111111222222111110 114
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEV 242 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v 242 (434)
+++++++|+|.++++.|..+.+.+.++++..+........ . ... ... .+..... .++...
T Consensus 183 ~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~-~----------~~~-~~~-----~~~~~~g-~~~~~~-- 242 (326)
T 3fpz_A 183 EVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTR-D----------LSQ-KHG-----VILSTTG-HDGPFG-- 242 (326)
T ss_dssp SCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSB-C----------TTS-CCC-----EEEECCC-SCSSSC--
T ss_pred CCEEEEEccCceeeehhhhhhhccCcEEEEeecccccccc-c----------cee-ecc-----eEEEEec-ceeeEe--
Confidence 7899999999999999999999999999887654432210 0 000 000 1111111 111000
Q ss_pred EeCCCcEEEcCEEEEccCCccChhhhhccccccCCcEEeCCCCCCCCCceEEecccccccccccCcccccccHHHHHHHH
Q 013890 243 KLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSA 322 (434)
Q Consensus 243 ~~~~g~~i~~d~vv~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g 322 (434)
.......+.+|.+..+.|.+|..... ..+.|.+|..++|++|+|||+||++....... +--+....++..|
T Consensus 243 ~~~~~~~~~~~~~~~~~g~~~~~~~~------~e~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~---rmGp~~g~mi~SG 313 (326)
T 3fpz_A 243 AFCAKRIVDIDQNQKLGGMKGLDMNH------AEHDVVIHSGAYAGVDNMYFAGMEVAELDGLN---RMGPTFGAMALSG 313 (326)
T ss_dssp SHHHHHHHHHCTTCCCCCCCCBCHHH------HHHHHHHHCEECTTSBTEEECTHHHHHHHTCC---BCCSCCHHHHHHH
T ss_pred ecceeEEEecCceeeecceecccccc------cCCeEEECCCeEECCCCEEEEchHhccccCCC---cCchHHHHHHHHH
Confidence 00001234566666777777654322 22567788889999999999999986432211 1002334456789
Q ss_pred HHHHHHHhcc
Q 013890 323 EQAVKTIMAT 332 (434)
Q Consensus 323 ~~aa~~i~~~ 332 (434)
+.||+.|...
T Consensus 314 ~~AAe~I~~~ 323 (326)
T 3fpz_A 314 VHAAEQILKH 323 (326)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998754
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.58 E-value=3.7e-16 Score=149.50 Aligned_cols=121 Identities=18% Similarity=0.316 Sum_probs=74.2
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC-------CCCCccc------cccCCCCCCCCC---
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY-------ERPALSK------AYLFPEGTARLP--- 64 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~-------~~~~~~~------~~~~~~~~~~~~--- 64 (434)
|| +++||+|||||++|+++|..|+++|.+ |+|+|+++.... .++.+.. .++. .......
T Consensus 1 MM-~~~dViIIGgG~aGl~aA~~la~~G~~---V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~-~~~~~~~~~l 75 (401)
T 2gqf_A 1 MS-QYSENIIIGAGAAGLFCAAQLAKLGKS---VTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLS-QNPHFVKSAL 75 (401)
T ss_dssp CE-EECSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEEC-SCTTSTHHHH
T ss_pred CC-CCCCEEEECCcHHHHHHHHHHHhCCCC---EEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhcc-CCHHHHHHHH
Confidence 55 469999999999999999999999987 999999875310 1111111 0000 0000000
Q ss_pred ---------------Ccceec---CC----CCC----CCCHhHHHHCCcEEEcCCeEEEEeCC----CC--EEEcCCCcE
Q 013890 65 ---------------GFHVCV---GS----GGE----RLLPEWYKEKGIELILSTEIVRADIA----SK--TLLSATGLI 112 (434)
Q Consensus 65 ---------------~~~~~~---~~----~~~----~~~~~~~~~~~v~~~~~~~v~~i~~~----~~--~v~~~~~~~ 112 (434)
+..... +. ... ..+.+.+++.|++++.++.|+++..+ .+ .|.+.++ +
T Consensus 76 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~ 154 (401)
T 2gqf_A 76 ARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-Q 154 (401)
T ss_dssp HHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-E
T ss_pred HhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-E
Confidence 000000 00 000 11233445679999999999998754 33 3555455 7
Q ss_pred EEeceEEEccCCCcc
Q 013890 113 FKYQILVIATGSTVL 127 (434)
Q Consensus 113 ~~~d~lilAtG~~~~ 127 (434)
+.+|++|+|||+.+.
T Consensus 155 i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 155 WQCKNLIVATGGLSM 169 (401)
T ss_dssp EEESEEEECCCCSSC
T ss_pred EECCEEEECCCCccC
Confidence 999999999999873
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.36 E-value=6.1e-13 Score=129.02 Aligned_cols=94 Identities=19% Similarity=0.229 Sum_probs=72.3
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccC--------CccChhhhhc-ccc-
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVG--------GRPLISLFKG-QVA- 273 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G--------~~p~~~~~~~-~~~- 273 (434)
+..+...+.+.+++.| +++++++|++|+.++++ ..|.+.+|+++.+|.||+|+| +.|+.+.... .+.
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~ 279 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDV--VNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEE 279 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSS--EEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCe--EEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHh
Confidence 4445666666777778 99999999999874443 458888998899999999999 8888764422 121
Q ss_pred -ccCCcEEeCCCCCCCCCceEEeccccc
Q 013890 274 -ENKGGIETDDFFKTSADDVYAVGDVAT 300 (434)
Q Consensus 274 -~~~g~i~vd~~~~t~~~~iya~Gd~~~ 300 (434)
.....++|+..++|+.+++|+.||+..
T Consensus 280 ~~~~~~~kv~~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 280 GHGGQGLKILIHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp CCCCCEEEEEEEEESCCTTEEEEBSSSS
T ss_pred CCCcceEEEEEEECCCCcCceEcCCCCE
Confidence 134569999999999999999999854
No 100
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.35 E-value=2.7e-12 Score=116.99 Aligned_cols=168 Identities=15% Similarity=0.111 Sum_probs=117.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCeEEEEeeCCccCCcc-------------------------------------cC
Q 013890 163 NGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPEPWCMPRL-------------------------------------FT 204 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~-g~~v~~~~~~~~~~~~~-------------------------------------~~ 204 (434)
...++|||+|++|+.+|..|++. |.+|+++++.+.+.... ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 35799999999999999999997 99999999876542100 12
Q ss_pred HHHHHHHHHHHHH-cCcEEEcCCeEEEEEecCCCcEEEEEeC---------CC-----cEEEcCEEEEccCCccChhhh-
Q 013890 205 ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVNEVKLK---------DG-----RTLEADIVVVGVGGRPLISLF- 268 (434)
Q Consensus 205 ~~~~~~~~~~l~~-~gV~~~~~~~v~~i~~~~~g~~~~v~~~---------~g-----~~i~~d~vv~a~G~~p~~~~~- 268 (434)
.++...+.+.+.+ .||++++++.+.++.. +++.+..+.+. +| .++.+|.||+|+|..+.....
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~-~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIV-KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEE-ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEe-cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 4455566666655 6999999999999986 34555566552 32 579999999999987765322
Q ss_pred -----hcc--ccc-cCCcEEeCC-------CCCCCCCceEEecccccccccccCcccccccHHHHHHHHHHHHHHHhccC
Q 013890 269 -----KGQ--VAE-NKGGIETDD-------FFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 269 -----~~~--~~~-~~g~i~vd~-------~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
..+ +.. ...++.+|. ..+++.|++|++|+++... .+.++..+.+..+..+|+.+|.+|...+
T Consensus 198 ~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~---~g~~~~gp~~~~~~~sG~~~a~~i~~~l 274 (284)
T 1rp0_A 198 VKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEI---DGAPRMGPTFGAMMISGQKAGQLALKAL 274 (284)
T ss_dssp HHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHH---HTCEECCSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhh---cCCCCcChHHHHHHHhHHHHHHHHHHHh
Confidence 111 111 123344442 3456789999999987532 2333333567788899999999998765
Q ss_pred C
Q 013890 334 G 334 (434)
Q Consensus 334 ~ 334 (434)
.
T Consensus 275 ~ 275 (284)
T 1rp0_A 275 G 275 (284)
T ss_dssp T
T ss_pred h
Confidence 4
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.28 E-value=4.2e-11 Score=118.57 Aligned_cols=158 Identities=18% Similarity=0.212 Sum_probs=95.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC-CCCCCCCCccccccCCC----CCCCCCC------------c
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA-VAPYERPALSKAYLFPE----GTARLPG------------F 66 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~-~~~~~~~~~~~~~~~~~----~~~~~~~------------~ 66 (434)
..|||||||||+||++||..|++.|.+ |+|||++. ......|..+.+..... ....+.+ +
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~k---VlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAK---TAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCC---EEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 358999999999999999999999987 99999984 22211122211110000 0000000 0
Q ss_pred cee---cCC---------C---CCCCCHhHHHH-CCcEEEcCCeEEEEeCCCCE---EEcCCCcEEEeceEEEccCCCcc
Q 013890 67 HVC---VGS---------G---GERLLPEWYKE-KGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTVL 127 (434)
Q Consensus 67 ~~~---~~~---------~---~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lilAtG~~~~ 127 (434)
... .+. . ....+.+.+++ .+++++. ..|+.+..+++. |.+.+|..+.++.+|+|||+.+.
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~-~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQ-EEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-SCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEE-eEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 000 000 0 00112233444 5899965 589988765543 66678889999999999999887
Q ss_pred cccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEe
Q 013890 128 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVY 193 (434)
Q Consensus 128 ~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~ 193 (434)
.+.. +|.. .. .+.+ +| +.++.+++..|.+.|.++..+.
T Consensus 182 ~~~~---~G~~-----~~----------------~~Gr---~G-~~~A~~la~~L~~lG~~v~~l~ 219 (637)
T 2zxi_A 182 GVIY---IGDK-----MI----------------PGGR---LG-EPRSEGLSDFYRRFDFPLIRFK 219 (637)
T ss_dssp CEEE---ETTE-----EE----------------ECSB---TT-BCCBCTHHHHHHHTTCCCEEEE
T ss_pred Ccee---ccce-----ec----------------CCCC---CC-chhHHHHHHHHHhcCCceEEec
Confidence 6653 3321 11 1222 23 5677889999999998876654
No 102
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.24 E-value=9.3e-11 Score=110.90 Aligned_cols=59 Identities=15% Similarity=0.260 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCC--cEEEcCEEEEccCCcc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDG--RTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g--~~i~~d~vv~a~G~~p 263 (434)
+..+.+.+.+.+++.|++++++++|+++..++++. ..|.+.+| .++.+|.||+|+|...
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGG-FELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSS-EEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCce-EEEEECCCceeEEEeCEEEECCCcch
Confidence 46788889999999999999999999998744443 35788887 4899999999999764
No 103
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.24 E-value=4.7e-10 Score=107.08 Aligned_cols=37 Identities=32% Similarity=0.512 Sum_probs=33.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
++|||+||||||||+++|..|+++|++ |+|+||.+..
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~---V~v~Er~~~~ 39 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLK---TLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCC
Confidence 469999999999999999999999998 9999998653
No 104
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.23 E-value=8.3e-12 Score=125.37 Aligned_cols=39 Identities=31% Similarity=0.256 Sum_probs=34.1
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcC--CCCCcEEEEeCCCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQG--VKPGELAIISKEAV 42 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g--~~~~~V~vie~~~~ 42 (434)
|....+||||||||+||++||+.|++.| .+ |+||||...
T Consensus 1 m~~~~~DVvIVG~G~AGl~aAl~la~~G~~~~---V~vlEk~~~ 41 (602)
T 1kf6_A 1 MQTFQADLAIVGAGGAGLRAAIAAAQANPNAK---IALISKVYP 41 (602)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHHHHCTTCC---EEEEESSCG
T ss_pred CCcccCCEEEECCCHHHHHHHHHHHhcCCCCc---EEEEeCCCC
Confidence 4445689999999999999999999998 76 999999853
No 105
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.21 E-value=2.4e-11 Score=102.82 Aligned_cols=110 Identities=18% Similarity=0.183 Sum_probs=75.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcce-ecCCCCCCCCHhHHHH
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHV-CVGSGGERLLPEWYKE 84 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 84 (434)
+|++|||||++|+.+|..|++.|.+ |+|+|+.+....... ....+|++.. ..+........+.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~---v~lie~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLK---VLVLDGGRSKVKGVS----------RVPNYPGLLDEPSGEELLRRLEAHARR 68 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSCCTTTTCS----------CCCCSTTCTTCCCHHHHHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCcccCch----------hhhccCCCcCCCCHHHHHHHHHHHHHH
Confidence 7999999999999999999999887 999999863211100 0111122100 0000011234455677
Q ss_pred CCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCccccc
Q 013890 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLT 130 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~p~ 130 (434)
.+++++.+ ++..++.+++ .+.+.++ ++.+|.+|+|+|..|..+.
T Consensus 69 ~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~ 114 (180)
T 2ywl_A 69 YGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPS 114 (180)
T ss_dssp TTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHHH
T ss_pred cCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCccc
Confidence 89999999 9999886543 5666677 8999999999999985443
No 106
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.14 E-value=8.7e-11 Score=116.79 Aligned_cols=158 Identities=16% Similarity=0.235 Sum_probs=93.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC-CCCCCCCCccccccCCC----CCCCCCC------------c
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA-VAPYERPALSKAYLFPE----GTARLPG------------F 66 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~-~~~~~~~~~~~~~~~~~----~~~~~~~------------~ 66 (434)
..+||||||||+||++||..|++.|.+ |+|||++. ......|..+.+..... ....+.+ +
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQ---TLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCC---EEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 468999999999999999999999987 99999984 22221222221110000 0000000 0
Q ss_pred ceec---CC---------C---CCCCCHhHHHH-CCcEEEcCCeEEEEeCCCC---EEEcCCCcEEEeceEEEccCCCcc
Q 013890 67 HVCV---GS---------G---GERLLPEWYKE-KGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGSTVL 127 (434)
Q Consensus 67 ~~~~---~~---------~---~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~lilAtG~~~~ 127 (434)
.... +. . ....+.+.+++ .|++++. ..|+.+..+++ .|.+.+|..+.+|.||+|||+.+.
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~-~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQ-QAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEE-EEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 0000 00 0 00112233445 5899965 58998876554 356677888999999999999887
Q ss_pred cccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEe
Q 013890 128 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVY 193 (434)
Q Consensus 128 ~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~ 193 (434)
.+.. +|... + .+.+ +| +.++++++..|.++|.+|+.+.
T Consensus 183 ~~~i---~G~~~---~------------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 183 GKIH---IGLDN---Y------------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp CEEE---CC--------------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred Cccc---cCccc---C------------------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 6663 44321 0 1223 46 7889999999999999998874
No 107
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.12 E-value=5.9e-11 Score=113.82 Aligned_cols=122 Identities=24% Similarity=0.326 Sum_probs=72.8
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC-------CCCCccc------cccCCCCCCC-----
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY-------ERPALSK------AYLFPEGTAR----- 62 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~-------~~~~~~~------~~~~~~~~~~----- 62 (434)
||++.+||+|||||++|++||..|+++|.+ |+|+|+.+.... .++.+.. .++. .....
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~---V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~-~~~~~~~~~l 98 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRR---VLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLS-GNPHFCKSAL 98 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEE-SSTTTTHHHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhh-cCHHHHHHHH
Confidence 666789999999999999999999999987 999999975321 0111100 0000 00000
Q ss_pred ----------------CC------CcceecCC--CCCCCCHhHHHHCCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEec
Q 013890 63 ----------------LP------GFHVCVGS--GGERLLPEWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQ 116 (434)
Q Consensus 63 ----------------~~------~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d 116 (434)
++ +....... .....+.+.+++.|++++.+++|+.+..++. .|.+.++ ++.+|
T Consensus 99 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad 177 (417)
T 3v76_A 99 ARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAA 177 (417)
T ss_dssp HHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEES
T ss_pred HhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEee
Confidence 00 00000000 0001122334567999999999999976655 3555566 89999
Q ss_pred eEEEccCCCcc
Q 013890 117 ILVIATGSTVL 127 (434)
Q Consensus 117 ~lilAtG~~~~ 127 (434)
+||+|||..+.
T Consensus 178 ~VIlAtG~~S~ 188 (417)
T 3v76_A 178 SLVVASGGKSI 188 (417)
T ss_dssp EEEECCCCSSC
T ss_pred EEEECCCCccC
Confidence 99999998763
No 108
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.12 E-value=7e-10 Score=105.54 Aligned_cols=58 Identities=21% Similarity=0.307 Sum_probs=48.9
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCcc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p 263 (434)
+..+.+.+.+.+++.|++++.+++|+++..+ ++.+..|.+.+| ++.+|.||+|+|...
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhH
Confidence 4677888888999999999999999999873 455656888877 799999999999764
No 109
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.09 E-value=1.4e-09 Score=105.43 Aligned_cols=58 Identities=17% Similarity=0.246 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCC---eEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGT---VAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~---~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
+..+...+.+.+++.|+++++++ +|+++.. +++.+.+|.+.+|+++.+|.||+|+|..
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCC
Confidence 46788888899999999999999 9999987 3566777999999889999999999964
No 110
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.06 E-value=1.9e-09 Score=104.01 Aligned_cols=61 Identities=13% Similarity=0.173 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc--EEEcCEEEEccCCccCh
Q 013890 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGR--TLEADIVVVGVGGRPLI 265 (434)
Q Consensus 205 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~--~i~~d~vv~a~G~~p~~ 265 (434)
..+.+.+.+.+++.|++++.+++|+++..++++....+.+.+|+ ++.+|.||.|+|.....
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l 168 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVI 168 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhh
Confidence 45666777778888999999999999987555555667778887 69999999999987643
No 111
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.03 E-value=4.4e-11 Score=117.63 Aligned_cols=150 Identities=19% Similarity=0.159 Sum_probs=104.6
Q ss_pred EeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHH---------HHHHHhcCCCcEEEECCCHHHHHHHHHHHH
Q 013890 114 KYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKL---------VEAIKAKKNGKAVVVGGGYIGLELSAALKI 184 (434)
Q Consensus 114 ~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l---------~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~ 184 (434)
.||++++++|++|..++. .+.+..+++......+..++ ..........+|+|||+|+.|+.+|..|++
T Consensus 37 ~~~~l~~~~g~~~~~~~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~ 113 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLS---QYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELAL 113 (497)
T ss_dssp HHHHHHHHHTCCTTCHHH---HHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcE---eehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHH
Confidence 468899999999877663 32222233333444444443 111111235789999999999999999999
Q ss_pred CCCeEEEEeeCCccCCc----cc----------------------------CHHHHHHHHHHHHHcCcEEEcCCeEEEEE
Q 013890 185 NNIDVSMVYPEPWCMPR----LF----------------------------TADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 185 ~g~~v~~~~~~~~~~~~----~~----------------------------~~~~~~~~~~~l~~~gV~~~~~~~v~~i~ 232 (434)
.|.+|+++++.+.+... .. ..++.+.+.+.+++.||++++++.|+++.
T Consensus 114 ~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~ 193 (497)
T 2bry_A 114 LGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQ 193 (497)
T ss_dssp TTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEE
T ss_pred CCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEE
Confidence 99999999987653210 00 14666778888888999999999999998
Q ss_pred ecC-CCcEEEEEe--C-CC--cEEEcCEEEEccCCccChh
Q 013890 233 TNA-DGEVNEVKL--K-DG--RTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 233 ~~~-~g~~~~v~~--~-~g--~~i~~d~vv~a~G~~p~~~ 266 (434)
.++ ++....|.+ . +| +++.+|.||+|+|..+...
T Consensus 194 ~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 194 PPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp CCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred EecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 631 233345655 4 56 4689999999999887664
No 112
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.01 E-value=5.3e-10 Score=98.53 Aligned_cols=117 Identities=15% Similarity=0.098 Sum_probs=70.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCC-CCcceecCC---CCCCCCHh
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARL-PGFHVCVGS---GGERLLPE 80 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~ 80 (434)
.+||+|||||++|+++|..|++.|.+ |+|||+...... ... .. .+.......+ ..+....+. .....+.+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~---v~lie~~~~~~G-~~~-~~-~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~ 76 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVR---VGLLTQSLDAVM-MPF-LP-PKPPFPPGSLLERAYDPKDERVWAFHARAKY 76 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTT-CCS-SC-CCSCCCTTCHHHHHCCTTCCCHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCCCcCC-ccc-Cc-cccccchhhHHhhhccCCCCCHHHHHHHHHH
Confidence 58999999999999999999999987 999999832110 000 00 0000000000 000000000 00112234
Q ss_pred HHHHC-CcEEEcCCeEEEEeCCCCE---EEcCCCcEEEeceEEEccCCCccc
Q 013890 81 WYKEK-GIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 81 ~~~~~-~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lilAtG~~~~~ 128 (434)
.+++. +++++. +.|+++..+++. +.+.++.++.+|.+|+|||.....
T Consensus 77 ~~~~~~gv~i~~-~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 77 LLEGLRPLHLFQ-ATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp HHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSC
T ss_pred HHHcCCCcEEEE-eEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhh
Confidence 45555 899985 589988765543 556777789999999999986543
No 113
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.99 E-value=8.6e-10 Score=108.92 Aligned_cols=58 Identities=14% Similarity=0.201 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCcc
Q 013890 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 205 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p 263 (434)
..+.+.+.+.+++.|++|+++++|++|.. +++++.+|++++|+++.+|.||++++...
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 56888899999999999999999999987 57788899999999999999999887543
No 114
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.99 E-value=5.6e-09 Score=100.03 Aligned_cols=58 Identities=24% Similarity=0.352 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCcc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p 263 (434)
+..+.+.+.+.+++.|++++.+++|+++.. +++.+..|.+.+| ++.+|.||+|+|...
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIK-DGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-eCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 457888888999999999999999999987 3556677888888 799999999999764
No 115
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.99 E-value=1.3e-10 Score=117.44 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=32.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc------CCCCCcEEEEeCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQ------GVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~------g~~~~~V~vie~~~~ 42 (434)
.+||||||||+||++||++|++. |.+ |+||||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~---V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAK---ILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCC---EEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCc---EEEEEecCC
Confidence 58999999999999999999997 887 999999854
No 116
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.93 E-value=2.6e-08 Score=101.98 Aligned_cols=58 Identities=9% Similarity=0.073 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc-EEEcCEEEEccCCcc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGR-TLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~-~i~~d~vv~a~G~~p 263 (434)
+..+.+.+.+.+++.|++++.+++|+++..++++ ..|.+.+|+ ++.+|.||+|+|...
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--WQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS--EEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--EEEEeCCCcEEEECCEEEECCCcch
Confidence 4678888889999999999999999999874444 468888887 799999999999653
No 117
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.93 E-value=1.8e-09 Score=103.42 Aligned_cols=125 Identities=17% Similarity=0.203 Sum_probs=73.6
Q ss_pred CCC-CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCC--ccc---------ccc----CCCC-CCCC
Q 013890 1 MAE-KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPA--LSK---------AYL----FPEG-TARL 63 (434)
Q Consensus 1 Mm~-~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~--~~~---------~~~----~~~~-~~~~ 63 (434)
||+ +++||+|||||++|+++|..|+++|++ |+|+|+.+........ +.. +++ .... ...+
T Consensus 1 ~M~~~~~dVvIVGaG~aGl~~A~~L~~~G~~---V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (399)
T 2x3n_A 1 GMTDNHIDVLINGCGIGGAMLAYLLGRQGHR---VVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHE 77 (399)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECE
T ss_pred CCCCCcCCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCccee
Confidence 454 458999999999999999999999987 9999998653111110 000 000 0000 0000
Q ss_pred -----CCc-ceecCCC-----------C----CCCCHhHHHHC-CcEEEcCCeEEEEeCCCC----EEEcCCCcEEEece
Q 013890 64 -----PGF-HVCVGSG-----------G----ERLLPEWYKEK-GIELILSTEIVRADIASK----TLLSATGLIFKYQI 117 (434)
Q Consensus 64 -----~~~-~~~~~~~-----------~----~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~ 117 (434)
.+. ....... . ...+.+.+.+. +++++.+++|+.+..+++ .+++.+|+++.+|.
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~ 157 (399)
T 2x3n_A 78 LEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRV 157 (399)
T ss_dssp EEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCE
Confidence 000 0000000 0 00111222334 899999999999986554 56777888899999
Q ss_pred EEEccCCCccc
Q 013890 118 LVIATGSTVLR 128 (434)
Q Consensus 118 lilAtG~~~~~ 128 (434)
||.|+|.....
T Consensus 158 vV~AdG~~s~v 168 (399)
T 2x3n_A 158 VVGADGIASYV 168 (399)
T ss_dssp EEECCCTTCHH
T ss_pred EEECCCCChHH
Confidence 99999987654
No 118
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.92 E-value=2e-09 Score=102.33 Aligned_cols=120 Identities=18% Similarity=0.196 Sum_probs=77.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCc--cc-------------cccCCCCCCCCCCccee
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPAL--SK-------------AYLFPEGTARLPGFHVC 69 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~--~~-------------~~~~~~~~~~~~~~~~~ 69 (434)
.+||+|||||++|+++|..|++.|++ |+|+|+.+......... .. .+.... .....+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~---v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~ 85 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWD---VRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGS--HTPPTYETW 85 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTC--BCCSCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhC--CCccceEEE
Confidence 58999999999999999999999987 99999986542111000 00 000000 000000000
Q ss_pred c-----------CCC--------CCCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCccccc
Q 013890 70 V-----------GSG--------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLT 130 (434)
Q Consensus 70 ~-----------~~~--------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~ 130 (434)
. +.. ....+.+.+.+.|++++.+++|+.++.+. .|++.++.++.+|.||.|+|..+....
T Consensus 86 ~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s~vr~ 164 (379)
T 3alj_A 86 MHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGSKVRD 164 (379)
T ss_dssp ETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTCHHHH
T ss_pred eCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccHHHHH
Confidence 0 000 01122334456799999999999998755 888888889999999999998875443
No 119
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.92 E-value=5.8e-09 Score=101.26 Aligned_cols=59 Identities=25% Similarity=0.401 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCcc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p 263 (434)
...+.+.+.+.+++.||+++.+++|+++.. +++.+..|.+.+|+++.+|.||+|+|..+
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 367788888899999999999999999986 35666788889998899999999999776
No 120
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.92 E-value=1.3e-08 Score=97.10 Aligned_cols=59 Identities=17% Similarity=0.250 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCcEEEcCEEEEccCCccC
Q 013890 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKL---KDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 205 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~---~~g~~i~~d~vv~a~G~~p~ 264 (434)
..+.+.+.+.+++.|++++.+++|+++..+ ++.+.+|.+ .++.++.+|.||.|.|....
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~ 163 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcchH
Confidence 355677777888889999999999999873 565555666 35568999999999997763
No 121
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.91 E-value=5.8e-09 Score=101.44 Aligned_cols=59 Identities=22% Similarity=0.374 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEec--------------CCCcEEEEEeCCCcEE--EcCEEEEccCCcc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTN--------------ADGEVNEVKLKDGRTL--EADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~--------------~~g~~~~v~~~~g~~i--~~d~vv~a~G~~p 263 (434)
+..+.+.+.+.+++.|++++.+++|+++..+ +++.+..|.+.+| ++ .+|.||+|+|...
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 4578888999999999999999999999762 2445567888888 68 9999999999653
No 122
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.90 E-value=7.2e-09 Score=103.32 Aligned_cols=60 Identities=25% Similarity=0.453 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHc-CcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 205 ADIAAFYEGYYANK-GIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 205 ~~~~~~~~~~l~~~-gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
..+.+.+.+.+++. ||+++.+ +|+++..++++.+..|.+.+|+++.+|.||.|+|.....
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 46788888888888 9999999 999998755677778899999889999999999976644
No 123
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.89 E-value=2.3e-09 Score=106.40 Aligned_cols=51 Identities=14% Similarity=0.069 Sum_probs=39.3
Q ss_pred HHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 210 FYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 210 ~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
.+....++.|++++++++|++|..++ +.+ .|.+.+|+++.+|.||+|++..
T Consensus 217 l~~~l~~~lg~~i~~~~~V~~i~~~~-~~v-~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 217 VSERIMDLLGDRVKLERPVIYIDQTR-ENV-LVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHHHGGGEESSCCEEEEECSS-SSE-EEEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHHHcCCcEEcCCeeEEEEECC-CeE-EEEECCCeEEEeCEEEECCCHH
Confidence 33344445588999999999998743 344 4888899999999999999864
No 124
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.89 E-value=2.4e-09 Score=102.43 Aligned_cols=125 Identities=15% Similarity=0.151 Sum_probs=75.5
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-C--cccc---ccCCC----CCCCCC--Ccce
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-A--LSKA---YLFPE----GTARLP--GFHV 68 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~-~--~~~~---~~~~~----~~~~~~--~~~~ 68 (434)
|++..+||+|||||++|+++|..|++.|++ |+|+|+.+....... . +... .+... .....+ .+..
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRDAGVD---VDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEY 77 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEE
Confidence 666679999999999999999999999987 999999865211100 0 0000 00000 000000 0000
Q ss_pred e---cCCC-------C----CCCCHhHHHH--CCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCccc
Q 013890 69 C---VGSG-------G----ERLLPEWYKE--KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 69 ~---~~~~-------~----~~~~~~~~~~--~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~ 128 (434)
. .+.. . ...+.+.+.+ .+++++.+++|+++..+.+ ++++.++.++.+|.||.|+|.....
T Consensus 78 ~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 78 VDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCHH
T ss_pred EecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchhH
Confidence 0 0000 0 0011222222 3889999999999976554 4667788889999999999987643
No 125
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.89 E-value=7.6e-08 Score=98.44 Aligned_cols=58 Identities=12% Similarity=0.136 Sum_probs=49.0
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCcc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p 263 (434)
+..+...+.+.+++.|++++++++|+++..++ +. ..|.+.+|.++.+|.||+|+|...
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~-v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKD-DC-WLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TE-EEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC-Ce-EEEEECCCCEEECCEEEECCCcch
Confidence 46788888899999999999999999998743 33 478888888899999999999653
No 126
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.88 E-value=1.5e-09 Score=107.93 Aligned_cols=158 Identities=14% Similarity=0.173 Sum_probs=93.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC-CCCCCCCcccccc------------CCC------------
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV-APYERPALSKAYL------------FPE------------ 58 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~-~~~~~~~~~~~~~------------~~~------------ 58 (434)
..|||+|||||+||++||..|++.|.+ |+|+|+... .....|..+.+.+ ...
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f 96 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLH---CLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQF 96 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCc---EEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCch
Confidence 468999999999999999999999987 999999842 2211121111100 000
Q ss_pred ---CCCCCCCcceec-CCC---CCCCCHhHHHH-CCcEEEcCCeEEEEeCCCCE---EEcCCCcEEEeceEEEccCCCcc
Q 013890 59 ---GTARLPGFHVCV-GSG---GERLLPEWYKE-KGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTVL 127 (434)
Q Consensus 59 ---~~~~~~~~~~~~-~~~---~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lilAtG~~~~ 127 (434)
....-+...... ... ......+.+++ .+++++.+ .|..+..+++. |.+.+|..+.+|.+|+|||+.+.
T Consensus 97 ~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 97 RMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred hhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 000000000000 000 00112233444 48999765 88887765554 55677889999999999999876
Q ss_pred cccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEE
Q 013890 128 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMV 192 (434)
Q Consensus 128 ~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~ 192 (434)
.+.. .+.. ... ..+++ |+.++++++..|.+.|.++..+
T Consensus 176 ~~i~---~G~~-----~~~----------------~g~~v---G~~~a~~la~~L~~~G~kv~~l 213 (641)
T 3cp8_A 176 GLIH---IGMD-----HFP----------------GGRST---AEPPVEGLTESLASLGFSFGRL 213 (641)
T ss_dssp CEEE---ETTE-----EEE----------------CSSST---TSCCBCSHHHHHHHTTCCEEEE
T ss_pred ccce---eeee-----eec----------------ccccc---CCchhhhhHHHHHhCCceEEee
Confidence 5442 2211 110 11221 3567788999999999988665
No 127
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.88 E-value=3.1e-09 Score=105.78 Aligned_cols=39 Identities=21% Similarity=0.435 Sum_probs=35.8
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
|++..+||+|||||++|+++|+.|+++|.+ |+|||+.+.
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~---v~viEr~~~ 39 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVR---VLVVERRPG 39 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSSS
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 666679999999999999999999999987 999999875
No 128
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.87 E-value=2.5e-08 Score=94.91 Aligned_cols=72 Identities=17% Similarity=0.272 Sum_probs=55.3
Q ss_pred CeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccC
Q 013890 187 IDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 187 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~ 264 (434)
....++.+....+. +..+.+.+.+.+++.|++++.+++|++++.++++ ..+.+.+| ++.+|.||+|+|....
T Consensus 135 ~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF---SENCIRAYRELAEARGAKVLTHTRVEDFDISPDS--VKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp TEEEEEETTCEEEE---HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--EEEEETTE-EEEEEEEEECCGGGHH
T ss_pred CceEEEeCCCcEEe---HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--EEEEeCCC-EEEeCEEEEecCccHH
Confidence 45566666554442 5678888999999999999999999999874443 45777666 7999999999997643
No 129
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.84 E-value=1.3e-09 Score=106.22 Aligned_cols=127 Identities=20% Similarity=0.260 Sum_probs=76.0
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC--CCCC--ccccccCCCC---C------CCCCCcc
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY--ERPA--LSKAYLFPEG---T------ARLPGFH 67 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~--~~~~--~~~~~~~~~~---~------~~~~~~~ 67 (434)
||++++||+|||||++|+++|..|++.|++ |+|+|+.+.... ..+. ++...+.... . ....+..
T Consensus 2 mm~~~~dVvIVGaG~aGl~aA~~La~~G~~---V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~ 78 (453)
T 3atr_A 2 MKELKYDVLIIGGGFAGSSAAYQLSRRGLK---ILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIK 78 (453)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHSSSSCC---EEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEE
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceE
Confidence 666679999999999999999999999987 999999864211 0010 0000000000 0 0000000
Q ss_pred ---------eec---CC--C---CCCCCHhHHHHCCcEEEcCCeEEEEeCCCCE---EEcC---CCc--EEEeceEEEcc
Q 013890 68 ---------VCV---GS--G---GERLLPEWYKEKGIELILSTEIVRADIASKT---LLSA---TGL--IFKYQILVIAT 122 (434)
Q Consensus 68 ---------~~~---~~--~---~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~~~---~~~--~~~~d~lilAt 122 (434)
... +. . ....+.+.+.+.|++++.++.|+++..++.. |.+. +|+ ++.+|.||.|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~Ad 158 (453)
T 3atr_A 79 LYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEAT 158 (453)
T ss_dssp EECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECC
T ss_pred EECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECc
Confidence 000 00 0 0011122334579999999999998876654 3333 554 78999999999
Q ss_pred CCCccccc
Q 013890 123 GSTVLRLT 130 (434)
Q Consensus 123 G~~~~~p~ 130 (434)
|.......
T Consensus 159 G~~s~vr~ 166 (453)
T 3atr_A 159 GYSRSFRS 166 (453)
T ss_dssp GGGCTTGG
T ss_pred CCchhhHH
Confidence 98765544
No 130
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.84 E-value=4.5e-09 Score=95.56 Aligned_cols=121 Identities=15% Similarity=0.122 Sum_probs=70.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHc-CCCCCcEEEEeCCCCCCCCCCCccccccCC-----CCC-----CCCC-----Ccc
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQ-GVKPGELAIISKEAVAPYERPALSKAYLFP-----EGT-----ARLP-----GFH 67 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~~~~V~vie~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~-----~~~ 67 (434)
.++||+|||||++|+++|..|+++ |.+ |+|||+.+..... .......+.. ... ..++ .+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~---V~viEk~~~~gg~-~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~ 113 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQ---VAIIEQSVSPGGG-AWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYV 113 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSC---EEEEESSSSCCTT-TTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCe---EEEEECCCCCCCc-eecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEE
Confidence 357999999999999999999997 877 9999998754211 0000000000 000 0000 000
Q ss_pred ee-cCCCCCCCCHhHHHH-CCcEEEcCCeEEEEeCCCCEE---EcC---------CC-----cEEEeceEEEccCCCccc
Q 013890 68 VC-VGSGGERLLPEWYKE-KGIELILSTEIVRADIASKTL---LSA---------TG-----LIFKYQILVIATGSTVLR 128 (434)
Q Consensus 68 ~~-~~~~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~v---~~~---------~~-----~~~~~d~lilAtG~~~~~ 128 (434)
.. ........+.+.+.+ .|++++.+++|+++..+++.+ .+. ++ ..+.+|.+|+|+|..+..
T Consensus 114 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 114 VVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp EESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred EecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHH
Confidence 00 000000011222333 689999999999998665533 321 22 579999999999986643
No 131
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.83 E-value=9.1e-09 Score=99.19 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhh
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~ 268 (434)
...+.+.+.+.+++.|++++++++|++|.. +++.+ | +.+|+++.+|.||+|+|......++
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINI-EEKKV--Y-TRDNEEYSFDVAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEET-TTTEE--E-ETTCCEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-ECCEE--E-EeCCcEEEeCEEEECCCHHHHHHhc
Confidence 467888999999999999999999999987 34444 4 5677899999999999976555544
No 132
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.83 E-value=6.2e-09 Score=102.65 Aligned_cols=120 Identities=17% Similarity=0.180 Sum_probs=74.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--------------CCC-CCc-----cccccCCCCC-C--
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--------------YER-PAL-----SKAYLFPEGT-A-- 61 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~--------------~~~-~~~-----~~~~~~~~~~-~-- 61 (434)
.+||+|||||++|++||+.|++.|++ |+|||+.+... +.. +.. ..+.+..... .
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~k---V~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i 183 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFN---PIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV 183 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCC---CEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCe---EEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEe
Confidence 47999999999999999999999987 99999985420 000 000 0000000000 0
Q ss_pred CCCCcc--------eecCCC------------------CCCCCHhHHHHCCcEEEcCCeEEEEeCCCC---EEEcCCCcE
Q 013890 62 RLPGFH--------VCVGSG------------------GERLLPEWYKEKGIELILSTEIVRADIASK---TLLSATGLI 112 (434)
Q Consensus 62 ~~~~~~--------~~~~~~------------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~ 112 (434)
..+.+. ...+.. ....+.+.+++.|++++.++.|+++..++. .|.+.++++
T Consensus 184 ~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~ 263 (549)
T 3nlc_A 184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE 263 (549)
T ss_dssp CCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCE
T ss_pred ccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCE
Confidence 000000 000000 001122334567999999999999987654 366778889
Q ss_pred EEeceEEEccCCCcc
Q 013890 113 FKYQILVIATGSTVL 127 (434)
Q Consensus 113 ~~~d~lilAtG~~~~ 127 (434)
+.+|.||+|+|..+.
T Consensus 264 i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 264 IKSRHVVLAVGHSAR 278 (549)
T ss_dssp EECSCEEECCCTTCH
T ss_pred EECCEEEECCCCChh
Confidence 999999999998873
No 133
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.83 E-value=8.8e-09 Score=101.82 Aligned_cols=124 Identities=15% Similarity=0.221 Sum_probs=74.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-Cc-c---ccccC----------CCCC--------
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-AL-S---KAYLF----------PEGT-------- 60 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~-~~-~---~~~~~----------~~~~-------- 60 (434)
+++||+|||||++|+++|+.|+++|++ |+|||+.+....... .+ . ..++. ....
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~---V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~ 82 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHR---VLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFR 82 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCC---EEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEE
Confidence 458999999999999999999999987 999999974222110 00 0 00000 0000
Q ss_pred --CCCCCcceecC-----CC--C--------CCCCHhHHHHCCcEEEcCCeEEEEeCCCCE---EE--cCCCc--EEEec
Q 013890 61 --ARLPGFHVCVG-----SG--G--------ERLLPEWYKEKGIELILSTEIVRADIASKT---LL--SATGL--IFKYQ 116 (434)
Q Consensus 61 --~~~~~~~~~~~-----~~--~--------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~--~~~~~--~~~~d 116 (434)
.....+..... .. . ...+.+.+.+.|++++.+++|+++..++.. +. ..+|. ++.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad 162 (512)
T 3e1t_A 83 WGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHAR 162 (512)
T ss_dssp CSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEE
T ss_pred ecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcC
Confidence 00000000000 00 0 011223344579999999999999876653 33 34563 79999
Q ss_pred eEEEccCCCccccc
Q 013890 117 ILVIATGSTVLRLT 130 (434)
Q Consensus 117 ~lilAtG~~~~~p~ 130 (434)
.||.|+|.......
T Consensus 163 ~VI~AdG~~S~vr~ 176 (512)
T 3e1t_A 163 FIVDASGNRTRVSQ 176 (512)
T ss_dssp EEEECCCTTCSSGG
T ss_pred EEEECCCcchHHHH
Confidence 99999998765444
No 134
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.82 E-value=1.9e-10 Score=115.83 Aligned_cols=54 Identities=17% Similarity=0.308 Sum_probs=43.0
Q ss_pred HHcCcEEEcCCeEEEEEecCC-CcEEEEEeC---CCc--EEEcCEEEEccCCccChhhhh
Q 013890 216 ANKGIKIIKGTVAVGFTTNAD-GEVNEVKLK---DGR--TLEADIVVVGVGGRPLISLFK 269 (434)
Q Consensus 216 ~~~gV~~~~~~~v~~i~~~~~-g~~~~v~~~---~g~--~i~~d~vv~a~G~~p~~~~~~ 269 (434)
++.||++++++.|+++..+++ +++.+|.+. +|+ ++.+|.||+|+|..++..++.
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLV 330 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHH
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHH
Confidence 345899999999999987433 367777774 354 688999999999999998774
No 135
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.80 E-value=9.4e-09 Score=102.81 Aligned_cols=123 Identities=22% Similarity=0.299 Sum_probs=73.7
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-Cccc--------------------------ccc
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-ALSK--------------------------AYL 55 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~-~~~~--------------------------~~~ 55 (434)
|+.+||+|||||++|+++|..|++.|++ |+|||+.+....... .+.. .+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~---V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 97 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHD---VTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFL 97 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCC---EEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEE
Confidence 3469999999999999999999999987 999999864322110 0000 000
Q ss_pred CCCCCC----CCCC---------cceecCC-CCCCCCHhHHHHCCcEEEcCCeEEEEeCC-CC--EEEcC-CC--cEEEe
Q 013890 56 FPEGTA----RLPG---------FHVCVGS-GGERLLPEWYKEKGIELILSTEIVRADIA-SK--TLLSA-TG--LIFKY 115 (434)
Q Consensus 56 ~~~~~~----~~~~---------~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~v~~i~~~-~~--~v~~~-~~--~~~~~ 115 (434)
...... .+.. ....+.. .....+.+.+.+.|++++.++.|+.+..+ ++ .|.+. +| .++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~A 177 (591)
T 3i3l_A 98 WGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVES 177 (591)
T ss_dssp CSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEE
T ss_pred ecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEc
Confidence 000000 0000 0000000 00011223344679999999999999865 32 45555 55 57999
Q ss_pred ceEEEccCCCccc
Q 013890 116 QILVIATGSTVLR 128 (434)
Q Consensus 116 d~lilAtG~~~~~ 128 (434)
|.+|.|+|.....
T Consensus 178 dlVV~AdG~~S~l 190 (591)
T 3i3l_A 178 DFVIDAGGSGGPI 190 (591)
T ss_dssp SEEEECCGGGCHH
T ss_pred CEEEECCCCcchh
Confidence 9999999986643
No 136
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.80 E-value=5e-09 Score=104.56 Aligned_cols=121 Identities=21% Similarity=0.209 Sum_probs=72.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC--Ccc-------------ccccCCCCC--CC-CCCc
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP--ALS-------------KAYLFPEGT--AR-LPGF 66 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~--~~~-------------~~~~~~~~~--~~-~~~~ 66 (434)
.+||+|||||++|+++|+.|+++|++ |+|||+.+....... .++ ..+...... .. +.+.
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~---V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 125 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVG---ALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGI 125 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCC---EEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTB
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCc
Confidence 58999999999999999999999987 999999865321100 000 000000000 00 0000
Q ss_pred ---ceec-----CCCC---------CCCCHhHHHHCCcEEEcCCeEEEEeCCCC--EEEc--CCC-cEEEeceEEEccCC
Q 013890 67 ---HVCV-----GSGG---------ERLLPEWYKEKGIELILSTEIVRADIASK--TLLS--ATG-LIFKYQILVIATGS 124 (434)
Q Consensus 67 ---~~~~-----~~~~---------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~--~~~-~~~~~d~lilAtG~ 124 (434)
.... .... ...+.+.+.+.|++++.+++|+.+..+.. ++++ .++ .++++|.||.|+|.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 126 FTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGG 205 (570)
T ss_dssp CTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCS
T ss_pred ccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCC
Confidence 0000 0000 01122333456999999999999887655 3444 567 68999999999998
Q ss_pred Cccc
Q 013890 125 TVLR 128 (434)
Q Consensus 125 ~~~~ 128 (434)
....
T Consensus 206 ~S~v 209 (570)
T 3fmw_A 206 RSTV 209 (570)
T ss_dssp SCHH
T ss_pred CchH
Confidence 7644
No 137
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.79 E-value=1.5e-08 Score=96.17 Aligned_cols=57 Identities=16% Similarity=0.129 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCcc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p 263 (434)
+..+...+.+.+++.|++++.+++|+++..+++ . ..|.+.+| ++.+|.||+|+|...
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDG-A-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETT-E-EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC-e-EEEEeCCC-EEEcCEEEECCChhH
Confidence 467888888999999999999999999987433 3 67888887 899999999999653
No 138
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.77 E-value=7e-08 Score=90.47 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=78.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc---------------------c-c---------CHHHHHHHH
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------------------L-F---------TADIAAFYE 212 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~---------------------~-~---------~~~~~~~~~ 212 (434)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+... + . ..++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 47999999999999999999999999999987643110 0 0 057888889
Q ss_pred HHHHHcCcEEEcCCeEEEEEecCCCcEEE-EEeCCCcEEEcCEEEEccCCc
Q 013890 213 GYYANKGIKIIKGTVAVGFTTNADGEVNE-VKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 213 ~~l~~~gV~~~~~~~v~~i~~~~~g~~~~-v~~~~g~~i~~d~vv~a~G~~ 262 (434)
+.+++.|++++++++|++++.. ++ ... |.+++| ++.+|.||+|+|..
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~-~~-~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHF-GE-RLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEE-TT-EEEEEETTSC-EEEEEEEEECCCSG
T ss_pred HHHHHcCCEEEcCCEEEEEEEC-CC-cEEEEEeCCC-EEEeCEEEECCCCC
Confidence 9999999999999999999873 33 345 788887 89999999999953
No 139
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.76 E-value=3.4e-08 Score=91.96 Aligned_cols=118 Identities=16% Similarity=0.220 Sum_probs=69.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCC---------ccccccCCCC---------------C
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPA---------LSKAYLFPEG---------------T 60 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~---------~~~~~~~~~~---------------~ 60 (434)
++||+|||||++|+++|..|++.|.+ |+|||+.+........ ....++.... .
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~---V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHV 78 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCc---EEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCe
Confidence 37999999999999999999999987 9999998642110000 0000000000 0
Q ss_pred -CCCCCcceecC-------CC-----CCCCCHhHHH--HCCcEEEcCCeEEEEeCCCC--EEEcCCCcEEE-eceEEEcc
Q 013890 61 -ARLPGFHVCVG-------SG-----GERLLPEWYK--EKGIELILSTEIVRADIASK--TLLSATGLIFK-YQILVIAT 122 (434)
Q Consensus 61 -~~~~~~~~~~~-------~~-----~~~~~~~~~~--~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~-~d~lilAt 122 (434)
.....+..... .. .......+.+ ..+++++.+++|+.+..+++ +|.+.++..+. +|+||+|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~ 158 (336)
T 1yvv_A 79 AEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIAT 158 (336)
T ss_dssp EEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECS
T ss_pred eeccccceeccCcccccCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcC
Confidence 00000000000 00 0011222222 23889999999999987655 45667777664 99999999
Q ss_pred CCC
Q 013890 123 GST 125 (434)
Q Consensus 123 G~~ 125 (434)
|..
T Consensus 159 g~~ 161 (336)
T 1yvv_A 159 PAP 161 (336)
T ss_dssp CHH
T ss_pred CHH
Confidence 964
No 140
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.76 E-value=4.8e-08 Score=102.23 Aligned_cols=58 Identities=26% Similarity=0.313 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCcc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p 263 (434)
+..+...+.+.+++.|++++.+++|+++.. +++.+..|.+.+| ++.+|.||+|+|...
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQ-SGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEE-eCCEEEEEEECCc-EEECCEEEECCccch
Confidence 467888899999999999999999999987 3455667888877 799999999999764
No 141
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.75 E-value=5.9e-08 Score=92.74 Aligned_cols=125 Identities=13% Similarity=0.088 Sum_probs=73.2
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC--Cc--c----ccccCCC----------CCC---
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP--AL--S----KAYLFPE----------GTA--- 61 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~--~~--~----~~~~~~~----------~~~--- 61 (434)
++.+||+|||||++|+++|..|++.|++ |+|+|+.+....... .+ . ...+... ...
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~ 100 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGID---VSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVN 100 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCE---EEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceE
Confidence 3468999999999999999999999987 999999865321100 00 0 0000000 000
Q ss_pred --CCCCcce-ec-----C-CCCC----CCCHhHHHH--CCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCC
Q 013890 62 --RLPGFHV-CV-----G-SGGE----RLLPEWYKE--KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGS 124 (434)
Q Consensus 62 --~~~~~~~-~~-----~-~~~~----~~~~~~~~~--~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~ 124 (434)
...+... .. . .... ..+.+.+.+ .+++++.+++|+.+..+.. ++++.++.++.+|.||.|+|.
T Consensus 101 ~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 101 IADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp EECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCT
T ss_pred EECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCc
Confidence 0000000 00 0 0000 011122222 1357888999999986654 566778888999999999998
Q ss_pred Cccccc
Q 013890 125 TVLRLT 130 (434)
Q Consensus 125 ~~~~p~ 130 (434)
......
T Consensus 181 ~S~vR~ 186 (398)
T 2xdo_A 181 MSKVRK 186 (398)
T ss_dssp TCSCCT
T ss_pred chhHHh
Confidence 765444
No 142
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.74 E-value=3.9e-08 Score=96.94 Aligned_cols=102 Identities=19% Similarity=0.194 Sum_probs=84.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc------------------------------------C----Cc-
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC------------------------------------M----PR- 201 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~------------------------------------~----~~- 201 (434)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+ + ..
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 468999999999999999999999999999987532 0 00
Q ss_pred -c-----------------------------cCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEE
Q 013890 202 -L-----------------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLE 251 (434)
Q Consensus 202 -~-----------------------------~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ 251 (434)
. ....+.+.+.+.+++.|++++++++|+++.. +++.+..|.+.+|+++.
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~ 265 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIK 265 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEE
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEE
Confidence 0 0145666778888899999999999999987 45667789999999999
Q ss_pred cCEEEEccCCccCh
Q 013890 252 ADIVVVGVGGRPLI 265 (434)
Q Consensus 252 ~d~vv~a~G~~p~~ 265 (434)
+|.||+|+|..+..
T Consensus 266 Ad~VVlA~G~~s~~ 279 (549)
T 3nlc_A 266 SRHVVLAVGHSARD 279 (549)
T ss_dssp CSCEEECCCTTCHH
T ss_pred CCEEEECCCCChhh
Confidence 99999999998864
No 143
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.74 E-value=1.2e-07 Score=90.56 Aligned_cols=56 Identities=20% Similarity=0.181 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
+..+.+.+.+.+++.|++++.+++|+++..++ +. ..|.+.++ ++.+|.||+|+|..
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~-v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDA-DG-VSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TE-EEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcC-Ce-EEEEECCC-EEEcCEEEEcCCcC
Confidence 35677788888889999999999999998733 33 34666666 79999999999975
No 144
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.73 E-value=1.3e-08 Score=100.05 Aligned_cols=124 Identities=16% Similarity=0.121 Sum_probs=74.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-Ccccc---ccCCCCC-CCCCCcc-----eecCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-ALSKA---YLFPEGT-ARLPGFH-----VCVGSG 73 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~-~~~~~---~~~~~~~-~~~~~~~-----~~~~~~ 73 (434)
..+||+|||||++|+++|..|++.|.+ |+|||+.+.....+. ..... .+..... .....+. ......
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~---V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 167 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGAR---VVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQ 167 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCe---EEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHH
Confidence 358999999999999999999999987 999999875431110 00000 0000000 0000000 000000
Q ss_pred CCCCCHhHHHHCCcEEEcCCeEEEEeCC---C--CEEEc--C-CC--cEEEeceEEEccCCCccccc
Q 013890 74 GERLLPEWYKEKGIELILSTEIVRADIA---S--KTLLS--A-TG--LIFKYQILVIATGSTVLRLT 130 (434)
Q Consensus 74 ~~~~~~~~~~~~~v~~~~~~~v~~i~~~---~--~~v~~--~-~~--~~~~~d~lilAtG~~~~~p~ 130 (434)
....+.+.+++.+++++.+++|+++..+ . -.|.+ . ++ .++.+|.||+|+|..+....
T Consensus 168 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 168 LQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEG 234 (497)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTT
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccccc
Confidence 0112234455679999999999999863 1 24555 3 55 46899999999999876543
No 145
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.72 E-value=3.7e-08 Score=94.95 Aligned_cols=62 Identities=21% Similarity=0.262 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhh
Q 013890 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 205 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~ 268 (434)
..+.+.+.+.+++.|++++++++|++|.. +++.+..|.++ |+++.+|.||+|+|......++
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILI-ENGKAAGIIAD-DRIHDADLVISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEET-TEEEECSEEEECSCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEE-ECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhc
Confidence 56888899999999999999999999987 35666667765 7789999999999965444443
No 146
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.71 E-value=4.6e-08 Score=91.40 Aligned_cols=116 Identities=17% Similarity=0.275 Sum_probs=69.1
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEeCCCCCCCCCCC----------c--cccccC--CC----------
Q 013890 6 FKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAVAPYERPA----------L--SKAYLF--PE---------- 58 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~---~g~~~~~V~vie~~~~~~~~~~~----------~--~~~~~~--~~---------- 58 (434)
+||+|||||++|+++|+.|++ .|++ |+|+||++........ . ...++. ..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~---V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 78 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLY---LAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYD 78 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEE---EEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCce---EEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHH
Confidence 699999999999999999999 7876 9999998643211000 0 000000 00
Q ss_pred ------CCCCCC----------CcceecCCCCCCC-CHhHHHHCCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEE
Q 013890 59 ------GTARLP----------GFHVCVGSGGERL-LPEWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILV 119 (434)
Q Consensus 59 ------~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~li 119 (434)
.....+ ............. ...+.+..+++++.++.|+.|..+++ +|.+.++..+.+|+||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV 158 (342)
T 3qj4_A 79 ELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIV 158 (342)
T ss_dssp HHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEE
T ss_pred HHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEE
Confidence 000000 0000000001111 12233334899999999999987654 4666677778999999
Q ss_pred EccCC
Q 013890 120 IATGS 124 (434)
Q Consensus 120 lAtG~ 124 (434)
+|+..
T Consensus 159 ~A~p~ 163 (342)
T 3qj4_A 159 LTMPV 163 (342)
T ss_dssp ECSCH
T ss_pred ECCCH
Confidence 99863
No 147
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.69 E-value=6e-08 Score=96.17 Aligned_cols=60 Identities=13% Similarity=0.316 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHH-cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 205 ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 205 ~~~~~~~~~~l~~-~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
..+.+.+.+.+++ .||+++.+ +|+++..++++.+..|.+.+|+++.+|.||.|+|.....
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 4567778888888 89999999 699998755666678888888789999999999986554
No 148
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.68 E-value=4.1e-08 Score=93.20 Aligned_cols=36 Identities=22% Similarity=0.447 Sum_probs=32.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
.++||+|||||++|+++|+.|+++|++ |+|||+...
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~G~~---V~llE~~~~ 51 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKENKN---TALFESGTM 51 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCC
Confidence 358999999999999999999999987 999999864
No 149
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.67 E-value=4.3e-08 Score=96.38 Aligned_cols=122 Identities=16% Similarity=0.201 Sum_probs=73.7
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC-CC-Ccc-------------ccccCCCCCC---CCC
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE-RP-ALS-------------KAYLFPEGTA---RLP 64 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~-~~-~~~-------------~~~~~~~~~~---~~~ 64 (434)
++++||+|||||++|+++|..|+++|.+ |+|||+.+..... +. .++ ..+... ... .+.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~~ 84 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVE---VVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV-ETSTQGHFG 84 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC-CBCCEEEET
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc-ccccccccc
Confidence 4568999999999999999999999987 9999998653211 10 000 000000 000 000
Q ss_pred CcceecCC-C-------------CCCCCHhHHHHCCcEEEcCCeEEEEeCCCCE--EEcCCCc---EEEeceEEEccCCC
Q 013890 65 GFHVCVGS-G-------------GERLLPEWYKEKGIELILSTEIVRADIASKT--LLSATGL---IFKYQILVIATGST 125 (434)
Q Consensus 65 ~~~~~~~~-~-------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~--v~~~~~~---~~~~d~lilAtG~~ 125 (434)
+....... . ....+.+.+.+.+++++.+++++++..+... +++.++. ++++|+||.|.|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 85 GLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp TEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred ceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 00000000 0 0011223344578999999999999766554 4444543 79999999999987
Q ss_pred ccc
Q 013890 126 VLR 128 (434)
Q Consensus 126 ~~~ 128 (434)
...
T Consensus 165 S~V 167 (500)
T 2qa1_A 165 SSV 167 (500)
T ss_dssp CHH
T ss_pred hHH
Confidence 643
No 150
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.66 E-value=3.8e-08 Score=98.56 Aligned_cols=36 Identities=31% Similarity=0.402 Sum_probs=33.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
.+||||||||+||++||+.|+++|.+ |+||||.+..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~---V~vlEk~~~~ 161 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAK---VILIEKEPVI 161 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCC
Confidence 58999999999999999999999987 9999998753
No 151
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.65 E-value=3.6e-08 Score=98.59 Aligned_cols=37 Identities=16% Similarity=0.330 Sum_probs=33.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
..+||||||||++|+++|+.|+++|.+ |+||||.+..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~---V~vlEk~~~~ 156 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGAN---VILVDKAPFS 156 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCC
Confidence 357999999999999999999999987 9999999753
No 152
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.64 E-value=1.1e-07 Score=88.35 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=79.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCC----cc------------CCc----ccCHHHHHHHHHHHHHcCcE
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP----WC------------MPR----LFTADIAAFYEGYYANKGIK 221 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~----~~------------~~~----~~~~~~~~~~~~~l~~~gV~ 221 (434)
..++++|||+|+.|+.+|..|++.|.+|+++++.+ .+ .+. ....++...+.+.+++.|++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 100 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTE 100 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCE
Confidence 35689999999999999999999999999999843 11 011 11357888899999999999
Q ss_pred EEcCCeEEEEEecCCCcEEEEEe---CCCcEEEcCEEEEccCCccChh
Q 013890 222 IIKGTVAVGFTTNADGEVNEVKL---KDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 222 ~~~~~~v~~i~~~~~g~~~~v~~---~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
++.++ +.++... ++. ..+.+ .++.++.+|.+|+|+|.+|...
T Consensus 101 i~~~~-v~~i~~~-~~~-~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 101 IITET-VSKVDLS-SKP-FKLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp EECSC-EEEEECS-SSS-EEEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred EEEeE-EEEEEEc-CCE-EEEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 99998 8999873 232 45555 4667899999999999877643
No 153
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.64 E-value=1e-07 Score=88.44 Aligned_cols=100 Identities=16% Similarity=0.184 Sum_probs=81.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCC---------------c---ccCHHHHHHHHHHHHHcCcEEEcC
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP---------------R---LFTADIAAFYEGYYANKGIKIIKG 225 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~---------------~---~~~~~~~~~~~~~l~~~gV~~~~~ 225 (434)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+.. . ....++.+.+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 5899999999999999999999999999998764221 0 013677888888888999999999
Q ss_pred CeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCC---ccCh
Q 013890 226 TVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGG---RPLI 265 (434)
Q Consensus 226 ~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~---~p~~ 265 (434)
++|.++....++ ...+.+.+|+ +.+|.+|+|+|. .|..
T Consensus 88 ~~v~~i~~~~~~-~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~ 128 (332)
T 3lzw_A 88 QAVESVEKQADG-VFKLVTNEET-HYSKTVIITAGNGAFKPRK 128 (332)
T ss_dssp CCEEEEEECTTS-CEEEEESSEE-EEEEEEEECCTTSCCEECC
T ss_pred CEEEEEEECCCC-cEEEEECCCE-EEeCEEEECCCCCcCCCCC
Confidence 999999874332 3567888885 999999999998 6654
No 154
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.64 E-value=1.7e-07 Score=93.39 Aligned_cols=59 Identities=22% Similarity=0.149 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCC---C--cEEEcCEEEEccCCcc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKD---G--RTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~---g--~~i~~d~vv~a~G~~p 263 (434)
+..+...+.+.+++.|++++.+++|+++.. +++.+.+|.+.+ | .++.+|.||.|+|...
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 567888888889999999999999999987 456666777653 3 4789999999999653
No 155
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.62 E-value=2.1e-07 Score=85.90 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=80.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeC--CccC--------Cc---ccCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPE--PWCM--------PR---LFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~--~~~~--------~~---~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
.+++|||+|+.|+.+|..|.+.|.+|+++++. ..+. +. ....++.+.+.+.+++.|++++. ..+.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 48999999999999999999999999999985 1110 11 12357788888889999999999 89999
Q ss_pred EEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChh
Q 013890 231 FTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
+..+ +....+.+.+|+++.+|.+|+|+|..|...
T Consensus 95 i~~~--~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 95 IENR--GDEFVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEC----CEEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEec--CCEEEEEECCCCEEEcCEEEECcCCCCccC
Confidence 9873 223568888888999999999999887653
No 156
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.61 E-value=1.3e-07 Score=92.89 Aligned_cols=122 Identities=17% Similarity=0.201 Sum_probs=73.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC-CC-Ccc-------------ccccCC--CCCCCCCCc
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE-RP-ALS-------------KAYLFP--EGTARLPGF 66 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~-~~-~~~-------------~~~~~~--~~~~~~~~~ 66 (434)
+.+||+|||||++|+++|..|+++|.+ |+|||+.+..... +. .++ ..+... .....+.+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 87 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVD---VMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGR 87 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecce
Confidence 468999999999999999999999987 9999998653211 10 000 000000 000000000
Q ss_pred ceecC---CC-----------CCCCCHhHHHHCCcEEEcCCeEEEEeCCCC--EEEcCCCc---EEEeceEEEccCCCcc
Q 013890 67 HVCVG---SG-----------GERLLPEWYKEKGIELILSTEIVRADIASK--TLLSATGL---IFKYQILVIATGSTVL 127 (434)
Q Consensus 67 ~~~~~---~~-----------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~---~~~~d~lilAtG~~~~ 127 (434)
..... .. ....+.+.+.+.+++++.+++++++..+.. ++++.++. ++++|+||.|.|....
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 88 PVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp EEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred ecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 00000 00 001122334456899999999999986654 34555553 7999999999998764
Q ss_pred c
Q 013890 128 R 128 (434)
Q Consensus 128 ~ 128 (434)
.
T Consensus 168 V 168 (499)
T 2qa2_A 168 V 168 (499)
T ss_dssp H
T ss_pred H
Confidence 3
No 157
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.61 E-value=3.3e-07 Score=90.83 Aligned_cols=102 Identities=21% Similarity=0.147 Sum_probs=82.8
Q ss_pred CcEEEECCCHHHHHHHHHHH-HCCCeEEEEeeCCccCC--------c------------cc----------------CHH
Q 013890 164 GKAVVVGGGYIGLELSAALK-INNIDVSMVYPEPWCMP--------R------------LF----------------TAD 206 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~-~~g~~v~~~~~~~~~~~--------~------------~~----------------~~~ 206 (434)
.+++|||+|+.|+.+|..|. +.|.+|+++++.+.+.. . .+ .++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 99999999998653310 0 00 246
Q ss_pred HHHHHHHHHHHcCc--EEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCC--ccCh
Q 013890 207 IAAFYEGYYANKGI--KIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGG--RPLI 265 (434)
Q Consensus 207 ~~~~~~~~l~~~gV--~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~--~p~~ 265 (434)
+.+.+.+.+++.|+ +++++++|.+++.++++....|.+++|+++.+|.||+|+|. +|..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 77788888889998 89999999999875555567889999999999999999994 5543
No 158
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.61 E-value=4.2e-08 Score=94.73 Aligned_cols=58 Identities=21% Similarity=0.213 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 205 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
.++.+.+.+.+++.|++++++++|++|..++++++.+|.+.+|+++.||.||.++++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 5788899999999999999999999998755788889999999899999999999987
No 159
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.61 E-value=3e-07 Score=91.29 Aligned_cols=103 Identities=19% Similarity=0.183 Sum_probs=83.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc--------------------c----------------cCHH
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR--------------------L----------------FTAD 206 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~--------------------~----------------~~~~ 206 (434)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+... . -.++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 357999999999999999999999999999986532100 0 1246
Q ss_pred HHHHHHHHHHHcCc--EEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccC--CccCh
Q 013890 207 IAAFYEGYYANKGI--KIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVG--GRPLI 265 (434)
Q Consensus 207 ~~~~~~~~l~~~gV--~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G--~~p~~ 265 (434)
+.+.+.+.+++.|+ +++++++|++++.++++....|.+++|+++.+|.||+|+| .+|..
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~ 163 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANT 163 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCC
Confidence 77788888899998 8999999999987555556788999999999999999999 45543
No 160
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.60 E-value=6.4e-08 Score=92.75 Aligned_cols=123 Identities=15% Similarity=0.130 Sum_probs=71.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCC--ccc---cccCCCC--------CCCCCCcceec
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPA--LSK---AYLFPEG--------TARLPGFHVCV 70 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~--~~~---~~~~~~~--------~~~~~~~~~~~ 70 (434)
+.+||+|||||++|+++|+.|+++|++ |+|+|+.+........ +.. ..+.... ......+....
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~---V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 98 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGID---CDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRD 98 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEE
Confidence 468999999999999999999999987 9999998753211000 000 0000000 00000000000
Q ss_pred ---C----------------CCC----CCCCHhHHHH--CCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccC
Q 013890 71 ---G----------------SGG----ERLLPEWYKE--KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATG 123 (434)
Q Consensus 71 ---~----------------~~~----~~~~~~~~~~--~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG 123 (434)
+ ... ...+.+.+.+ ..++++.+++|+.+..++. ++++.+++++.+|.||.|+|
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG 178 (407)
T 3rp8_A 99 FRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADG 178 (407)
T ss_dssp TTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCC
T ss_pred CCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCC
Confidence 0 000 0011122211 1278889999999987665 45667888999999999999
Q ss_pred CCcccc
Q 013890 124 STVLRL 129 (434)
Q Consensus 124 ~~~~~p 129 (434)
......
T Consensus 179 ~~S~vr 184 (407)
T 3rp8_A 179 SHSALR 184 (407)
T ss_dssp TTCSSH
T ss_pred cChHHH
Confidence 876543
No 161
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.59 E-value=3.2e-07 Score=85.29 Aligned_cols=98 Identities=19% Similarity=0.245 Sum_probs=79.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC------------------CcccCHHHHHHHHHHHHHcCcEEEc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM------------------PRLFTADIAAFYEGYYANKGIKIIK 224 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~------------------~~~~~~~~~~~~~~~l~~~gV~~~~ 224 (434)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.....++.+.+.+.+++.+++++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 84 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSL 84 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEe
Confidence 3579999999999999999999999999999875431 0011256777788888888999999
Q ss_pred CCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 225 GTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 225 ~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
++.|..++..++ ...+.+.+|+++.+|.+|+|+|..
T Consensus 85 ~~~v~~i~~~~~--~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 85 GERAETLEREGD--LFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp SCCEEEEEEETT--EEEEEETTSCEEEEEEEEECCTTS
T ss_pred CCEEEEEEECCC--EEEEEECCCCEEEeCEEEECCCCC
Confidence 999999987332 356778888889999999999984
No 162
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.59 E-value=2.6e-07 Score=88.41 Aligned_cols=99 Identities=19% Similarity=0.248 Sum_probs=79.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc---------------------------c-------------
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------------------------L------------- 202 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~---------------------------~------------- 202 (434)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+... +
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 458999999999999999999999999999987643100 0
Q ss_pred -----------------------cCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEcc
Q 013890 203 -----------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGV 259 (434)
Q Consensus 203 -----------------------~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~ 259 (434)
...++.+.+.+.+++.||+++++++|+++..++++ ..|.+.+| ++.+|.||+|+
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~g-~i~ad~VIlAt 183 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSAG-TVDAASLVVAS 183 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTE-EEEESEEEECC
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCc-EEEeeEEEECC
Confidence 01256677888888899999999999999873333 56888888 89999999999
Q ss_pred CCccC
Q 013890 260 GGRPL 264 (434)
Q Consensus 260 G~~p~ 264 (434)
|..+.
T Consensus 184 G~~S~ 188 (417)
T 3v76_A 184 GGKSI 188 (417)
T ss_dssp CCSSC
T ss_pred CCccC
Confidence 97763
No 163
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.58 E-value=5.1e-07 Score=84.91 Aligned_cols=99 Identities=17% Similarity=0.247 Sum_probs=80.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC-------C-----------cccCHHHHHHHHHHHHHcCcEEEc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------P-----------RLFTADIAAFYEGYYANKGIKIIK 224 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~-------~-----------~~~~~~~~~~~~~~l~~~gV~~~~ 224 (434)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+. + .....++.+.+.+.+++.|++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 4589999999999999999999999999999875431 1 001267777888888899999999
Q ss_pred CCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 225 GTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 225 ~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
++.|..+...+++ ...|.+.+|+++.+|.+|+|+|..
T Consensus 94 ~~~v~~i~~~~~~-~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 94 NETVTKYTKLDDG-TFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp SCCEEEEEECTTS-CEEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEEEEEECCCc-eEEEEECCCcEEEeeEEEEccCCC
Confidence 9999999874333 356888888899999999999984
No 164
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.58 E-value=1.4e-07 Score=89.13 Aligned_cols=35 Identities=14% Similarity=0.334 Sum_probs=32.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
++||+|||||++|+++|++|+++|++ |+|||+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~---V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLN---VLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCC---EEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCC
Confidence 48999999999999999999999987 999999864
No 165
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.57 E-value=4.8e-07 Score=85.72 Aligned_cols=99 Identities=26% Similarity=0.294 Sum_probs=81.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc-----------------------------------------
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------------------------------- 201 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~----------------------------------------- 201 (434)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999987644210
Q ss_pred --cc-----------CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChh
Q 013890 202 --LF-----------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 202 --~~-----------~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
.+ ...+.+.+.+.+++.||+++.+++|++++. ++ .|++.+|+++.+|.||.|+|..+...
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~vr 163 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSKVR 163 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCHHH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHHHH
Confidence 00 045577788888889999999999999986 44 57788898999999999999887654
No 166
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.57 E-value=4.7e-08 Score=97.27 Aligned_cols=39 Identities=28% Similarity=0.439 Sum_probs=34.2
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEeCCCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAV 42 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~---~g~~~~~V~vie~~~~ 42 (434)
|+++.+||+|||||++|+++|..|++ .|++ |+|||+...
T Consensus 1 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~---V~liE~~~~ 42 (538)
T 2aqj_A 1 MNKPIKNIVIVGGGTAGWMAASYLVRALQQQAN---ITLIESAAI 42 (538)
T ss_dssp -CCBCCEEEEECCSHHHHHHHHHHHHHCCSSCE---EEEEECSSS
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhhcCCCCE---EEEECCCCC
Confidence 65667999999999999999999999 8876 999999754
No 167
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.56 E-value=4.2e-07 Score=82.84 Aligned_cols=100 Identities=16% Similarity=0.170 Sum_probs=77.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC---------Cc---ccCHHHHHHHHHHHHHc-CcEEEcCCeEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM---------PR---LFTADIAAFYEGYYANK-GIKIIKGTVAVG 230 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~---------~~---~~~~~~~~~~~~~l~~~-gV~~~~~~~v~~ 230 (434)
.+++|||+|+.|+.+|..|++.|.+|+++++.+... +. ....++.+.+.+.+++. +++++.+ ++..
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 479999999999999999999999999999753211 10 11246777788888776 7888765 8899
Q ss_pred EEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChh
Q 013890 231 FTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
++.++++ ..+.+.+|+++.+|.+|+|+|.+|...
T Consensus 82 i~~~~~~--~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 82 AKGSFGE--FIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEETTE--EEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred EEEcCCe--EEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 9873332 578888998999999999999887643
No 168
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.56 E-value=1.5e-07 Score=89.65 Aligned_cols=123 Identities=17% Similarity=0.156 Sum_probs=73.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC---CCCCC-Ccccc---ccCCCC--------CCCCCCccee
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA---PYERP-ALSKA---YLFPEG--------TARLPGFHVC 69 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~---~~~~~-~~~~~---~~~~~~--------~~~~~~~~~~ 69 (434)
++||+|||||++|+++|..|++.|++ |+|+|+.+.. ...+. .+... .+.... ......+...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 78 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGID---NVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIA 78 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEE
Confidence 48999999999999999999999987 9999998631 00000 00000 000000 0000000000
Q ss_pred -------------c-CCC--------CCCCCHhHHHHCCcEEEcCCeEEEEeCCC---CEEEc-CCCc--EEEeceEEEc
Q 013890 70 -------------V-GSG--------GERLLPEWYKEKGIELILSTEIVRADIAS---KTLLS-ATGL--IFKYQILVIA 121 (434)
Q Consensus 70 -------------~-~~~--------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~---~~v~~-~~~~--~~~~d~lilA 121 (434)
. +.. ....+.+.+.+.+++++.+++|+++..++ -.|.+ .+|. ++.+|.||.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~A 158 (394)
T 1k0i_A 79 FAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGC 158 (394)
T ss_dssp ETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEEC
T ss_pred ECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEEC
Confidence 0 000 00112223345699999999999998642 35665 5776 7999999999
Q ss_pred cCCCccccc
Q 013890 122 TGSTVLRLT 130 (434)
Q Consensus 122 tG~~~~~p~ 130 (434)
+|.......
T Consensus 159 dG~~S~vr~ 167 (394)
T 1k0i_A 159 DGFHGISRQ 167 (394)
T ss_dssp CCTTCSTGG
T ss_pred CCCCcHHHH
Confidence 998765443
No 169
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.55 E-value=8.3e-08 Score=91.04 Aligned_cols=101 Identities=21% Similarity=0.323 Sum_probs=78.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCC--cccCH---------HHHHHHHHHHHHcCcEEEcCCeEEE
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP--RLFTA---------DIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~--~~~~~---------~~~~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
+..+++|||+|+.|+.+|..|...+.+|+++++.+.+.- ..++. ++.....+.+++.||+++++++|++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 456899999999999999999888899999998775321 11111 1122345567789999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChh
Q 013890 231 FTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
++. +.+ .|.+++|+++.+|.+|+|||.+|...
T Consensus 88 id~--~~~--~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 88 IDP--NNK--LVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEEECCCCEEECCEEEEecCCCcCCC
Confidence 986 333 57889999999999999999887653
No 170
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.55 E-value=1.1e-07 Score=91.89 Aligned_cols=99 Identities=21% Similarity=0.329 Sum_probs=78.3
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCeEEEEeeCCccCCc----------ccCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPWCMPR----------LFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~---~g~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
++++|||+|+.|+.+|..|++ .|.+|+++++.+.+... ....++...+.+.+++.||+++. ..++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999999 89999999998865211 01223444466778889999985 58888
Q ss_pred EEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhh
Q 013890 231 FTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISL 267 (434)
Q Consensus 231 i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~ 267 (434)
++. ++. .|.+++|+++.+|.+|+|+|.+|+...
T Consensus 84 id~--~~~--~V~~~~g~~i~~d~lviAtG~~~~~~~ 116 (437)
T 3sx6_A 84 IDA--EAQ--NITLADGNTVHYDYLMIATGPKLAFEN 116 (437)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCCEECGGG
T ss_pred EEc--CCC--EEEECCCCEEECCEEEECCCCCcCccc
Confidence 876 332 577889989999999999999987653
No 171
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.55 E-value=5.4e-07 Score=82.83 Aligned_cols=98 Identities=19% Similarity=0.259 Sum_probs=77.2
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCc---c--------CCc----ccCHHHHHHHHHHHHHcCcEEEcCCeE
Q 013890 165 KAVVVGGGYIGLELSAALKINNI-DVSMVYPEPW---C--------MPR----LFTADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~-~v~~~~~~~~---~--------~~~----~~~~~~~~~~~~~l~~~gV~~~~~~~v 228 (434)
+++|||+|+.|+.+|..|.+.|. +|+++++... + .+. ....++.+.+.+.+++.|++++. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 68999999999999999999999 9999987521 0 111 11256777888888899999998 788
Q ss_pred EEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 229 VGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 229 ~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
.++...+ ....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 82 ~~i~~~~--~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 82 QRVSKKD--SHFVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp EEEEEET--TEEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEcC--CEEEEEEcCCCEEECCEEEECCCCCCCC
Confidence 8887632 2245777888899999999999987654
No 172
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.55 E-value=1.3e-07 Score=94.65 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=32.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc------CCCCCcEEEEeCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQ------GVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~------g~~~~~V~vie~~~~~ 43 (434)
.+||||||||+||+++|+.|+++ |++ |+||||.+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~---V~vlEk~~~~ 76 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLR---VCLVEKAAHI 76 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCC---EEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCc---EEEEeCCCCC
Confidence 48999999999999999999998 887 9999998653
No 173
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.55 E-value=4.4e-07 Score=83.34 Aligned_cols=101 Identities=16% Similarity=0.214 Sum_probs=79.3
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeeCC--ccC-----------CcccCHHHHHHHHHHHHHcCcEEEcCCeEEEE
Q 013890 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEP--WCM-----------PRLFTADIAAFYEGYYANKGIKIIKGTVAVGF 231 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~--~~~-----------~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i 231 (434)
+++|||+|+.|+.+|..|++.|.+|+++++.. .+. +....+++.+.+.+.+++.|++++.++++..+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 68999999999999999999999999997531 110 00012467788888889999999999999999
Q ss_pred EecCC-CcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 232 TTNAD-GEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 232 ~~~~~-g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
..+.+ +....+.+++|+++.+|.+|+|+|.+|..
T Consensus 83 ~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 83 IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 75322 22456888888899999999999987754
No 174
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.55 E-value=9.7e-07 Score=87.19 Aligned_cols=61 Identities=18% Similarity=0.314 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
...+.+.+.+.+++.|++++.+ +|+++..++++.+..|.+.+|+++.+|.||.|+|.....
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 3567778888888899999999 999998756677778889999889999999999976543
No 175
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.54 E-value=7.5e-07 Score=86.71 Aligned_cols=103 Identities=17% Similarity=0.227 Sum_probs=78.3
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCe---EEEEeeCCccCCc------------------------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKI---NNID---VSMVYPEPWCMPR------------------------------------ 201 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~---~g~~---v~~~~~~~~~~~~------------------------------------ 201 (434)
++++|||+|+.|+.+|..|.+ .|.+ |+++++.+.+...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 589999999999999999999 9999 9999987542100
Q ss_pred --------------cc-CHHHHHHHHHHHHHcCcE--EEcCCeEEEEEecCCCcEEEEEeCC---C--cEEEcCEEEEcc
Q 013890 202 --------------LF-TADIAAFYEGYYANKGIK--IIKGTVAVGFTTNADGEVNEVKLKD---G--RTLEADIVVVGV 259 (434)
Q Consensus 202 --------------~~-~~~~~~~~~~~l~~~gV~--~~~~~~v~~i~~~~~g~~~~v~~~~---g--~~i~~d~vv~a~ 259 (434)
+. ..++.+.+.+.+++.|++ +++++.|..++..+++....|++.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 00 145667778888888998 9999999999874443234566544 4 578999999999
Q ss_pred C--CccChh
Q 013890 260 G--GRPLIS 266 (434)
Q Consensus 260 G--~~p~~~ 266 (434)
| .+|...
T Consensus 163 G~~s~p~~p 171 (464)
T 2xve_A 163 GHFSTPYVP 171 (464)
T ss_dssp CSSSSBCCC
T ss_pred CCCCCCccC
Confidence 9 677654
No 176
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.53 E-value=3.1e-07 Score=91.08 Aligned_cols=56 Identities=21% Similarity=0.268 Sum_probs=39.8
Q ss_pred cCCcEEeCCCCCCCCCceEEecccccccccccCccc-ccccHHHHHHHHHHHHHHHhcc
Q 013890 275 NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMR-RVEHVDHARKSAEQAVKTIMAT 332 (434)
Q Consensus 275 ~~g~i~vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~-~~~~~~~A~~~g~~aa~~i~~~ 332 (434)
..|+|.||.+.||++|++||+|+|+.... .|..+ ...+...+.-.|++|++++...
T Consensus 353 t~GGi~vd~~~~t~I~GLyAaGE~a~~g~--hGanrl~gnsl~~~~vfG~~Ag~~aa~~ 409 (540)
T 1chu_A 353 TCGGVMVDDHGRTDVEGLYAIGEVSYTGL--HGANRMASNSLLECLVYGWSAAEDITRR 409 (540)
T ss_dssp ESCEEECCTTCBCSSBTEEECGGGEECSS--STTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcEEECCCCCCccCCEEeccccccccc--cCCCcCcchhHHHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999984211 11111 1134556667788888887654
No 177
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.53 E-value=6.2e-07 Score=89.80 Aligned_cols=58 Identities=19% Similarity=0.221 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCc--EEEcCEEEEccCC
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKL---KDGR--TLEADIVVVGVGG 261 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~---~~g~--~i~~d~vv~a~G~ 261 (434)
+..+...+.+.+++.||+++.++.+.++..++++++.+|.. .+|+ .+.++.||+|+|-
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 35677778888888999999999999998743677777764 4565 5899999999995
No 178
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.51 E-value=1.6e-07 Score=94.88 Aligned_cols=39 Identities=23% Similarity=0.351 Sum_probs=35.2
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
|++..+||||||||.||++||++|++.|.+ |+||||...
T Consensus 1 M~~~~~DVvVIGgG~AGL~AAl~aae~G~~---V~vlEK~~~ 39 (660)
T 2bs2_A 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLS---TIVLSLIPV 39 (660)
T ss_dssp CCEEECSEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCG
T ss_pred CCcccccEEEECchHHHHHHHHHHHHCCCc---EEEEeccCC
Confidence 655679999999999999999999999987 999999864
No 179
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.50 E-value=8.7e-07 Score=84.46 Aligned_cols=99 Identities=14% Similarity=0.158 Sum_probs=78.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCC--------------------cc---------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP--------------------RL--------------------- 202 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~--------------------~~--------------------- 202 (434)
.+++|||+|+.|+.+|..+++.|.+|+++++.+.+.. .+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 4799999999999999999999999999998764310 00
Q ss_pred ----------------------cCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecC---CCcEEEEEeCCCcEEEcCEEEE
Q 013890 203 ----------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA---DGEVNEVKLKDGRTLEADIVVV 257 (434)
Q Consensus 203 ----------------------~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~---~g~~~~v~~~~g~~i~~d~vv~ 257 (434)
...++.+.+.+.+++.||++++++.++++..++ ++. ..|.+.++ ++.+|.||+
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 134556678888889999999999999998631 233 46777777 799999999
Q ss_pred ccCCccC
Q 013890 258 GVGGRPL 264 (434)
Q Consensus 258 a~G~~p~ 264 (434)
|+|..+.
T Consensus 163 AtG~~s~ 169 (401)
T 2gqf_A 163 ATGGLSM 169 (401)
T ss_dssp CCCCSSC
T ss_pred CCCCccC
Confidence 9998874
No 180
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.50 E-value=4.7e-07 Score=84.08 Aligned_cols=98 Identities=12% Similarity=0.158 Sum_probs=76.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEee----CCcc------------CCc----ccCHHHHHHHHHHHHHcCcEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYP----EPWC------------MPR----LFTADIAAFYEGYYANKGIKII 223 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~----~~~~------------~~~----~~~~~~~~~~~~~l~~~gV~~~ 223 (434)
.+++|||+|+.|+.+|..|++.|.+|+++++ ...+ .+. ....++.+.+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 5799999999999999999999999999997 2111 011 1234677788888899999999
Q ss_pred cCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 224 KGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 224 ~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
.++ +..++...+. ..|.+ +|+++.+|.+|+|+|.+|..
T Consensus 89 ~~~-v~~i~~~~~~--~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 89 TET-VTKVDFSSKP--FKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp CCC-CCEEECSSSS--EEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred EeE-EEEEEEcCCE--EEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 986 8888763222 45666 77789999999999987754
No 181
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.49 E-value=4.9e-08 Score=93.47 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=32.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~ 42 (434)
.+||+|||||++|+++|+.|+++ |++ |+|||+...
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~---V~vlE~~~~ 72 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRS---LLLVEEGGL 72 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCe---EEEEeCCCC
Confidence 48999999999999999999999 887 999999853
No 182
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.49 E-value=8.4e-07 Score=82.10 Aligned_cols=101 Identities=16% Similarity=0.141 Sum_probs=77.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc-----------cCCcc----cCHHHHHHHHHHHHHcCcEEEcCCeE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------CMPRL----FTADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~-----------~~~~~----~~~~~~~~~~~~l~~~gV~~~~~~~v 228 (434)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+.+ ...++.+.+.+.+++.|++++. ..+
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 4799999999999999999999999999998721 01110 1246777888888999999998 578
Q ss_pred EEEEecC-CCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 229 VGFTTNA-DGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 229 ~~i~~~~-~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
.+++... ++....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 88 ~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp EEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 8887731 221134666788899999999999987754
No 183
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.48 E-value=4.6e-07 Score=89.87 Aligned_cols=102 Identities=12% Similarity=0.122 Sum_probs=81.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCC----------------------------------c-c-cCHHH
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP----------------------------------R-L-FTADI 207 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~----------------------------------~-~-~~~~~ 207 (434)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . + -.+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 4799999999999999999999999999998753210 0 0 12567
Q ss_pred HHHHHHHHHHcCc--EEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccC--CccCh
Q 013890 208 AAFYEGYYANKGI--KIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVG--GRPLI 265 (434)
Q Consensus 208 ~~~~~~~l~~~gV--~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G--~~p~~ 265 (434)
.+.+.+..++.|+ .++++++|.+++.++++....|.+++|+++.+|.||+|+| .+|..
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 7788888888888 7899999999987555556688999999999999999999 55554
No 184
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.48 E-value=4.1e-07 Score=89.74 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=33.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
..+||||||+|++|++||++|+++|.+ |+||||.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~---V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGAD---VLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCC
Confidence 358999999999999999999999987 9999999763
No 185
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.47 E-value=5.5e-08 Score=93.86 Aligned_cols=96 Identities=21% Similarity=0.330 Sum_probs=72.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC--CeEEEEeeCCccCCcccCH----------HHHHHHHHHHHHcCcEEEcCCeEEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCMPRLFTA----------DIAAFYEGYYANKGIKIIKGTVAVGF 231 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g--~~v~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~gV~~~~~~~v~~i 231 (434)
|+|+|||+|+.|+.+|..|++.+ .+|+++++.+.+.-...-+ ++...+.+.+++.||+++.+ ++++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEE
Confidence 68999999999999999999875 7899999987643210111 11122344567789999877 68899
Q ss_pred EecCCCcEEEEEeCCCcEEEcCEEEEccCCccC
Q 013890 232 TTNADGEVNEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 232 ~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~ 264 (434)
+. +++ .|++++|+++++|.+|+|||.++.
T Consensus 82 d~--~~~--~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DP--DAN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ET--TTT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred EC--CCC--EEEECCCCEEECCEEEEeCCCCcc
Confidence 86 443 578899999999999999998754
No 186
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.47 E-value=1.3e-07 Score=85.20 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=33.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
.+||+|||||||||+||..|+++|++ |+||||.+.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~---V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCC
Confidence 48999999999999999999999998 9999998754
No 187
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.47 E-value=1.3e-06 Score=85.98 Aligned_cols=36 Identities=17% Similarity=0.476 Sum_probs=32.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
+.+||+|||||++|+++|+.|+++|++ |+|+|+++.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~---V~llE~~~~ 37 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLS---VLMLEAQDL 37 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCC---EEEEECCCC
Confidence 468999999999999999999999987 999999864
No 188
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.46 E-value=1.9e-06 Score=81.23 Aligned_cols=98 Identities=19% Similarity=0.279 Sum_probs=76.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCC---c---------cC-Cc---------------------------c
Q 013890 164 GKAVVVGGGYIGLELSAALKINNI-DVSMVYPEP---W---------CM-PR---------------------------L 202 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~-~v~~~~~~~---~---------~~-~~---------------------------~ 202 (434)
.+++|||+|+.|+.+|..|++.|. +|+++++.+ . +. +. .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 479999999999999999999999 999999875 0 00 00 0
Q ss_pred -cCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccC
Q 013890 203 -FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 203 -~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~ 264 (434)
....+...+.+.+++.|++++.++.|.++...+++ ..|.+.++ ++.+|.||+|+|..+.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAY--YTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe--EEEEeCCC-EEEeCEEEECCCCCCc
Confidence 01345666777888899999999999999873333 45777777 5899999999998654
No 189
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.46 E-value=1.2e-06 Score=80.25 Aligned_cols=100 Identities=16% Similarity=0.136 Sum_probs=71.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc----------cC--CcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEE
Q 013890 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPW----------CM--PRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~----------~~--~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~ 232 (434)
.++|||+|+.|+.+|..+++.|.+|+++++... +. +...++++.+...+.+.+.+...+....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 689999999999999999999999999987532 11 011234566666666666554444444555665
Q ss_pred ecCCCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 233 TNADGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 233 ~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
..+++ ...+.+.+|+++.+|.+|+|||.+|..
T Consensus 88 ~~~~~-~~~v~~~~g~~~~a~~liiATGs~p~~ 119 (304)
T 4fk1_A 88 KQSTG-LFEIVTKDHTKYLAERVLLATGMQEEF 119 (304)
T ss_dssp ECTTS-CEEEEETTCCEEEEEEEEECCCCEEEC
T ss_pred ecCCC-cEEEEECCCCEEEeCEEEEccCCcccc
Confidence 53333 356888999999999999999988754
No 190
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.46 E-value=3.2e-07 Score=84.40 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=32.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~ 43 (434)
.+||+|||||++|+++|+.|+++ |++ |+|||+....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~---V~LiEk~~~~ 116 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLR---ITIVEAGVAP 116 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSC---EEEEESSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCE---EEEEeCCCcc
Confidence 58999999999999999999997 776 9999998754
No 191
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.46 E-value=2.5e-07 Score=88.60 Aligned_cols=120 Identities=19% Similarity=0.202 Sum_probs=69.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC--Cc--cc-------ccc---------------CCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP--AL--SK-------AYL---------------FPEG 59 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~--~~--~~-------~~~---------------~~~~ 59 (434)
.+|+||||||+|+++|..|+++|++ |+|+||.+....... .+ .. .+. ....
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~---v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~ 78 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIK---VTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQS 78 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC---EEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcce
Confidence 4799999999999999999999997 999999865322111 00 00 000 0000
Q ss_pred CCCCCCccee--cC-----------CCCC----CCCHhHHH-HCCcEEEcCCeEEEEeCCC-C--EEEcCCCcEEEeceE
Q 013890 60 TARLPGFHVC--VG-----------SGGE----RLLPEWYK-EKGIELILSTEIVRADIAS-K--TLLSATGLIFKYQIL 118 (434)
Q Consensus 60 ~~~~~~~~~~--~~-----------~~~~----~~~~~~~~-~~~v~~~~~~~v~~i~~~~-~--~v~~~~~~~~~~d~l 118 (434)
.......... .+ .... ..+.+.+. ..+.++..+++++.+.... . ++++.||.++++|.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlv 158 (412)
T 4hb9_A 79 RFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVL 158 (412)
T ss_dssp EEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEE
T ss_pred eEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEE
Confidence 0000000000 00 0000 01112222 2345688888999886433 2 577889999999999
Q ss_pred EEccCCCccc
Q 013890 119 VIATGSTVLR 128 (434)
Q Consensus 119 ilAtG~~~~~ 128 (434)
|-|.|.+...
T Consensus 159 VgADG~~S~v 168 (412)
T 4hb9_A 159 VGADGSNSKV 168 (412)
T ss_dssp EECCCTTCHH
T ss_pred EECCCCCcch
Confidence 9999987643
No 192
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.45 E-value=1.5e-06 Score=85.77 Aligned_cols=104 Identities=14% Similarity=0.233 Sum_probs=81.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCC--ccC-----------CcccCHHHHHHHHHHHHHcCcEEEcCCeE
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP--WCM-----------PRLFTADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~--~~~-----------~~~~~~~~~~~~~~~l~~~gV~~~~~~~v 228 (434)
...+++|||+|+.|+.+|..+++.|.+|+++++.. .+. +....+++.+.+.+.+++.||+++.++++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v 290 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSA 290 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCE
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEE
Confidence 35579999999999999999999999999997531 111 01123577888888899999999999999
Q ss_pred EEEEecCC-CcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 229 VGFTTNAD-GEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 229 ~~i~~~~~-g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
..+....+ +....|.+.+|+++.+|.+|+|+|.+|..
T Consensus 291 ~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 291 SKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp EEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 99975222 23457888899899999999999987653
No 193
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.45 E-value=1.7e-07 Score=89.87 Aligned_cols=39 Identities=15% Similarity=0.366 Sum_probs=32.1
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
|| ..+||+|||||++|+++|..|++.|.++ |+|+|+.+.
T Consensus 1 M~-~~~dVvIVGaG~aGl~~A~~L~~~G~~~--v~v~E~~~~ 39 (410)
T 3c96_A 1 MS-EPIDILIAGAGIGGLSCALALHQAGIGK--VTLLESSSE 39 (410)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCSE--EEEEESSSS
T ss_pred CC-CCCeEEEECCCHHHHHHHHHHHhCCCCe--EEEEECCCC
Confidence 54 4689999999999999999999987542 899999865
No 194
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.43 E-value=4.8e-07 Score=88.01 Aligned_cols=99 Identities=13% Similarity=0.246 Sum_probs=75.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||++|+.+|..|++.|.+ |+++++.+... +.. ...+ .....+.+++
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~---V~lv~~~~~~l---~~~---------~~~~-----------~~~l~~~l~~ 220 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAE---VIVLEYMDRIL---PTM---------DLEV-----------SRAAERVFKK 220 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC---TTS---------CHHH-----------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCE---EEEEecCCccc---ccc---------CHHH-----------HHHHHHHHHH
Confidence 36899999999999999999999876 99999986421 000 0000 1234566778
Q ss_pred CCcEEEcCCeEEEEeCCCCE--EEcCCCcEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..++.+++. +.+.++.++.+|.+|+|+|.+|..+
T Consensus 221 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp HTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCT
T ss_pred CCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCC
Confidence 89999999999999876654 4445788899999999999988653
No 195
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.43 E-value=2.2e-06 Score=85.72 Aligned_cols=100 Identities=20% Similarity=0.239 Sum_probs=78.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc-----------------------------------------
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------------------------------- 201 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~----------------------------------------- 201 (434)
...|+|||+|..|+.+|..+++.|.+|+++++.+.+...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 357999999999999999999999999999876543210
Q ss_pred ----------------------------------------------ccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecC
Q 013890 202 ----------------------------------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 235 (434)
Q Consensus 202 ----------------------------------------------~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~ 235 (434)
.....+.+.+.+.+++.||+++++++++++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~ 285 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD 285 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECT
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC
Confidence 0012455667777888999999999999998744
Q ss_pred CCcEEEEEeC--CCc--EEEcCEEEEccCCc
Q 013890 236 DGEVNEVKLK--DGR--TLEADIVVVGVGGR 262 (434)
Q Consensus 236 ~g~~~~v~~~--~g~--~i~~d~vv~a~G~~ 262 (434)
++++.+|.+. +|+ ++.+|.||+|+|..
T Consensus 286 ~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 286 KGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp TSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred CCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 4777777665 675 68999999999964
No 196
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.42 E-value=1.1e-06 Score=87.78 Aligned_cols=100 Identities=23% Similarity=0.258 Sum_probs=77.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc------------------------------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------------------------------------------ 201 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~------------------------------------------ 201 (434)
..|+|||+|..|+.+|..+++.|.+|+++++.+.+...
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 36999999999999999999999999999876532110
Q ss_pred ---------------------------------------------ccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCC
Q 013890 202 ---------------------------------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 236 (434)
Q Consensus 202 ---------------------------------------------~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~ 236 (434)
.....+.+.+.+.+++.||+++++++++++..+++
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 281 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD 281 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC
Confidence 00123456667777889999999999999987433
Q ss_pred CcEEEEEeC--CCc--EEEcCEEEEccCCcc
Q 013890 237 GEVNEVKLK--DGR--TLEADIVVVGVGGRP 263 (434)
Q Consensus 237 g~~~~v~~~--~g~--~i~~d~vv~a~G~~p 263 (434)
+++.+|.+. +|+ ++.+|.||+|+|...
T Consensus 282 g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 282 HSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp SBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred CcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 777777664 675 689999999999543
No 197
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.41 E-value=3.3e-07 Score=91.96 Aligned_cols=36 Identities=25% Similarity=0.312 Sum_probs=32.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..+||||||||+||++||+.|++.|.+ |+||||...
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~---V~vlEK~~~ 52 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFN---TACVTKLFP 52 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCc---EEEEeccCC
Confidence 358999999999999999999999987 999999864
No 198
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.41 E-value=5.3e-07 Score=90.16 Aligned_cols=36 Identities=28% Similarity=0.388 Sum_probs=33.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
.+||+|||+|++|+++|..|++.|.+ |+|+|+.+..
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~---v~~~e~~~~~ 161 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAK---VILLEKEPIP 161 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCC---EEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEecCCCC
Confidence 57999999999999999999999987 9999998753
No 199
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.41 E-value=1.5e-06 Score=82.96 Aligned_cols=101 Identities=17% Similarity=0.147 Sum_probs=79.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCC-------------------------------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP------------------------------------------- 200 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------- 200 (434)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999997653300
Q ss_pred --c--------------ccCHHHHHHHHHHHHHc-CcEEEcCCeEEEEEecCCCcEE-EEEeCCCcEEEcCEEEEccCCc
Q 013890 201 --R--------------LFTADIAAFYEGYYANK-GIKIIKGTVAVGFTTNADGEVN-EVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 201 --~--------------~~~~~~~~~~~~~l~~~-gV~~~~~~~v~~i~~~~~g~~~-~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
. .....+.+.+.+.+++. |++++.+++|++++.++++ +. .+++.+|+++.+|.||.|.|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCC
Confidence 0 00125566777777777 9999999999999874443 32 6788899899999999999987
Q ss_pred cCh
Q 013890 263 PLI 265 (434)
Q Consensus 263 p~~ 265 (434)
...
T Consensus 166 s~v 168 (399)
T 2x3n_A 166 SYV 168 (399)
T ss_dssp CHH
T ss_pred hHH
Confidence 764
No 200
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.40 E-value=1.4e-06 Score=80.29 Aligned_cols=98 Identities=12% Similarity=0.102 Sum_probs=75.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc-----------cCCc----ccCHHHHHHHHHHHHHcCcEEEcCCeE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------CMPR----LFTADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~-----------~~~~----~~~~~~~~~~~~~l~~~gV~~~~~~~v 228 (434)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+. ...+++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 5799999999999999999999999999985410 0111 1235777788888899999999986 8
Q ss_pred EEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 229 VGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 229 ~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
..++.. ++. ..+ +.+++++.+|.+|+|+|.+|..
T Consensus 85 ~~i~~~-~~~-~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 85 NKVDLQ-NRP-FRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp EEEECS-SSS-EEE-EESSCEEEEEEEEECCCEEECC
T ss_pred eEEEec-CCE-EEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 888763 222 344 5677889999999999987654
No 201
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.40 E-value=6e-07 Score=85.75 Aligned_cols=101 Identities=25% Similarity=0.348 Sum_probs=74.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CeEEEEeeCCccCCcccCHHHH---------HHHHHHHHHcCcEEEcCCeEEEE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCMPRLFTADIA---------AFYEGYYANKGIKIIKGTVAVGF 231 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~gV~~~~~~~v~~i 231 (434)
+|||+|||+|+.|+.+|..|++.+ .+|+++++.+.+........+. ..-.+.+.+.||+++.+ +++.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 789999999999999999998875 5899999887543221111111 01123456789999876 68888
Q ss_pred EecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhhh
Q 013890 232 TTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 232 ~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~~ 268 (434)
+. +.+ .+.+.+|+++.+|.+|+|+|.+++....
T Consensus 81 d~--~~~--~v~~~~g~~i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 81 DP--DKK--LVKTAGGAEFAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp ET--TTT--EEEETTSCEEECSEEEECCCEEECGGGS
T ss_pred Ec--cCc--EEEecccceeecceeeeccCCccccCCc
Confidence 76 443 4778999999999999999998876533
No 202
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.39 E-value=2.1e-06 Score=79.11 Aligned_cols=98 Identities=13% Similarity=0.126 Sum_probs=75.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc-----------cCCc---ccCHHHHHHHHHHHHHcCcEEEcCCeEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------CMPR---LFTADIAAFYEGYYANKGIKIIKGTVAV 229 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~-----------~~~~---~~~~~~~~~~~~~l~~~gV~~~~~~~v~ 229 (434)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+. ....++.+.+.+.+++.|++++. .++.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 95 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEVR 95 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeEE
Confidence 5799999999999999999999999999997421 0111 11256777788888899999998 6888
Q ss_pred EEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 230 GFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 230 ~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
.++...+ ...|.+ ++.++.+|.+|+|+|.+|..
T Consensus 96 ~i~~~~~--~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 96 SIKKTQG--GFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp EEEEETT--EEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred EEEEeCC--EEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 8876322 234555 56689999999999987654
No 203
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.39 E-value=3.1e-07 Score=86.58 Aligned_cols=99 Identities=22% Similarity=0.317 Sum_probs=73.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCC--cc--------cC-HHHHHHHHHHHHHcCcEEEcCCeEEE
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP--RL--------FT-ADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~--~~--------~~-~~~~~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
.+.+++|||+|+.|+.+|..|++.| +|+++++.+.... .. .+ .++.....+.+++.||+++.++.+..
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 4789999999999999999999999 9999998764321 00 01 11112234567788999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChh
Q 013890 231 FTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
++. +.. .|. .+|+++.+|.+|+|||.+|...
T Consensus 86 id~--~~~--~V~-~~g~~~~~d~lViATGs~p~~p 116 (367)
T 1xhc_A 86 IDR--GRK--VVI-TEKGEVPYDTLVLATGARAREP 116 (367)
T ss_dssp EET--TTT--EEE-ESSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEE-ECCcEEECCEEEECCCCCCCCC
Confidence 976 332 344 5778899999999999888653
No 204
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.39 E-value=1.5e-06 Score=84.29 Aligned_cols=102 Identities=21% Similarity=0.142 Sum_probs=76.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEeeCCccCCc-------------------------------------c
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWCMPR-------------------------------------L 202 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~--~v~~~~~~~~~~~~-------------------------------------~ 202 (434)
...+++|||+|+.|+.+|..|.+.|. +|+++++.+.+... .
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35789999999999999999999999 99999987432100 0
Q ss_pred --------------c--------------CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCC---Cc---
Q 013890 203 --------------F--------------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKD---GR--- 248 (434)
Q Consensus 203 --------------~--------------~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~---g~--- 248 (434)
+ ...+.+.+.+..++.++.++++++|++++..+++ ..|++.+ |+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~--~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS--WVVTYKGTKAGSPIS 162 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE--EEEEEEESSTTCCEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe--EEEEEeecCCCCeeE
Confidence 0 1245566777777778889999999999873322 4555554 66
Q ss_pred EEEcCEEEEccCC--ccCh
Q 013890 249 TLEADIVVVGVGG--RPLI 265 (434)
Q Consensus 249 ~i~~d~vv~a~G~--~p~~ 265 (434)
++.+|.||+|+|. .|+.
T Consensus 163 ~~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EEEESEEEECCCSSSSBCB
T ss_pred EEEeCEEEECCCCCCCCCC
Confidence 7999999999998 6654
No 205
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.39 E-value=2e-07 Score=89.98 Aligned_cols=98 Identities=20% Similarity=0.346 Sum_probs=75.0
Q ss_pred CcEEEECCCHHHHHHHHHHHH--CCCeEEEEeeCCccCCcc----------cCHHHHHHHHHHHHHcCcEEEcCCeEEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKI--NNIDVSMVYPEPWCMPRL----------FTADIAAFYEGYYANKGIKIIKGTVAVGF 231 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~--~g~~v~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~~gV~~~~~~~v~~i 231 (434)
++++|||+|+.|+.+|..|++ .|.+|+++++.+.+.... ...++...+.+.+++.||+++.+ .+..+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 689999999999999999999 789999999987653211 01112223344566789999975 88888
Q ss_pred EecCCCcEEEEEeCCCcEEEcCEEEEccCCccChh
Q 013890 232 TTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 232 ~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
+. ++. .+.+++++++.+|.+|+|+|.+|+..
T Consensus 82 d~--~~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DP--DAN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ET--TTT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred EC--CCC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 76 332 57788898899999999999987654
No 206
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.38 E-value=3.2e-07 Score=87.94 Aligned_cols=98 Identities=21% Similarity=0.284 Sum_probs=74.8
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCeEEEEeeCCccCCc----------ccCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPWCMPR----------LFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~---~g~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
++++|||+|+.|+.+|..|++ .|.+|+++++.+.+... ....++...+.+.+++.|++++.+ ++..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 479999999999999999999 89999999988754211 012233445667777889999988 8888
Q ss_pred EEecCCCcEEEEEeCCCc----EEEcCEEEEccCCccChh
Q 013890 231 FTTNADGEVNEVKLKDGR----TLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~~~~v~~~~g~----~i~~d~vv~a~G~~p~~~ 266 (434)
++. ++. .|.+.+++ ++.+|.+|+|+|.+|+..
T Consensus 81 i~~--~~~--~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDA--KSS--MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EET--TTT--EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeC--CCC--EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 876 333 35555554 489999999999988764
No 207
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.37 E-value=1.4e-06 Score=81.07 Aligned_cols=99 Identities=12% Similarity=0.126 Sum_probs=76.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc---c--------CCc----ccCHHHHHHHHHHHHHcCcEEEcCCe
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW---C--------MPR----LFTADIAAFYEGYYANKGIKIIKGTV 227 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~---~--------~~~----~~~~~~~~~~~~~l~~~gV~~~~~~~ 227 (434)
..+++|||+|+.|+.+|..|.+.|.+|+++++... + .+. ....++.+.+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 45799999999999999999999999999985310 0 111 1125677788888889999999987
Q ss_pred EEEEEecCCCcEEEE-EeCCCcEEEcCEEEEccCCccCh
Q 013890 228 AVGFTTNADGEVNEV-KLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 228 v~~i~~~~~g~~~~v-~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
+.+++. .+. ..+ .+.+|+++.+|.+|+|+|.+|..
T Consensus 93 v~~i~~-~~~--~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 93 VESVSL-HGP--LKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp EEEEEC-SSS--SEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEe-CCc--EEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 888875 222 245 67788899999999999987754
No 208
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.37 E-value=7.6e-07 Score=85.23 Aligned_cols=97 Identities=15% Similarity=0.265 Sum_probs=75.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+-+|..|++.|.+ |+++++.+...-. .++. .......+.+++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~---------------~~~~-------~~~~~l~~~l~~ 199 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVH---VSLVETQPRLMSR---------------AAPA-------TLADFVARYHAA 199 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSSTT---------------TSCH-------HHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCE---EEEEEeCCccccc---------------ccCH-------HHHHHHHHHHHH
Confidence 46899999999999999999999876 9999998642100 0000 001234566788
Q ss_pred CCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCccc
Q 013890 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~ 128 (434)
.|++++.++.+.+++ ++ .+.+.+++++.+|.+|+|+|.+|..
T Consensus 200 ~GV~i~~~~~v~~i~-~~-~v~~~~g~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 200 QGVDLRFERSVTGSV-DG-VVLLDDGTRIAADMVVVGIGVLAND 241 (408)
T ss_dssp TTCEEEESCCEEEEE-TT-EEEETTSCEEECSEEEECSCEEECC
T ss_pred cCcEEEeCCEEEEEE-CC-EEEECCCCEEEcCEEEECcCCCccH
Confidence 999999999999998 44 8888888899999999999988753
No 209
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.36 E-value=6.2e-07 Score=85.74 Aligned_cols=97 Identities=16% Similarity=0.351 Sum_probs=74.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEeeCCccCCc-------c-----cCHHHHHHHHHHHHHcCcEEEcCCeEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWCMPR-------L-----FTADIAAFYEGYYANKGIKIIKGTVAV 229 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~--~v~~~~~~~~~~~~-------~-----~~~~~~~~~~~~l~~~gV~~~~~~~v~ 229 (434)
++++|||+|+.|+.+|..|++.|. +|+++++.+.+.-. + ...++.....+.+.+.||+++. +++.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999999998 89999987632110 0 0111222345667789999999 8999
Q ss_pred EEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 230 GFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 230 ~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
.++. +++ .+.+.+|+++.+|.+|+|||.+|..
T Consensus 81 ~id~--~~~--~v~~~~g~~~~~d~lvlAtG~~p~~ 112 (404)
T 3fg2_P 81 SIDR--EGR--KLLLASGTAIEYGHLVLATGARNRM 112 (404)
T ss_dssp EEET--TTT--EEEESSSCEEECSEEEECCCEEECC
T ss_pred EEEC--CCC--EEEECCCCEEECCEEEEeeCCCccC
Confidence 9976 333 4778899999999999999987654
No 210
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.36 E-value=1.1e-06 Score=84.80 Aligned_cols=101 Identities=27% Similarity=0.428 Sum_probs=75.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--eEEEEeeCCccCC-------ccc-----CHHHHHHHHHHHHHcCcEEEcCCeE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWCMP-------RLF-----TADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~--~v~~~~~~~~~~~-------~~~-----~~~~~~~~~~~l~~~gV~~~~~~~v 228 (434)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+.. .++ ...+.....+.+++.||+++.++.|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 4689999999999999999999998 7999987654210 000 0111111235677889999999999
Q ss_pred EEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChhh
Q 013890 229 VGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLISL 267 (434)
Q Consensus 229 ~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~~ 267 (434)
..++. ++. .|.+++|+++.+|.+|+|+|.+|....
T Consensus 84 ~~i~~--~~~--~v~~~~g~~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 84 TAINR--DRQ--QVILSDGRALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp EEEET--TTT--EEEETTSCEEECSEEEECCCEEECCCG
T ss_pred EEEEC--CCC--EEEECCCCEEECCEEEEcCCCCccCCC
Confidence 99986 332 577788889999999999998886543
No 211
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.36 E-value=7.2e-07 Score=88.80 Aligned_cols=36 Identities=22% Similarity=0.256 Sum_probs=33.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..+||+|||||++|+++|..|+++|.+ |+|||+.+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~---V~vlEr~~~ 60 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVG---HLVVEQTDG 60 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 358999999999999999999999987 999999865
No 212
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.35 E-value=7.6e-07 Score=84.52 Aligned_cols=99 Identities=14% Similarity=0.184 Sum_probs=75.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+..... . .+.. ......+.+++
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~~~~-------~--------~~~~-------~~~~l~~~l~~ 199 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQ---LDVVAPCEQVMPG-------L--------LHPA-------AAKAVQAGLEG 199 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSSTT-------T--------SCHH-------HHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecCcchhhc-------c--------cCHH-------HHHHHHHHHHH
Confidence 46899999999999999999999876 9999998542100 0 0000 01234566777
Q ss_pred CCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCccc
Q 013890 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~ 128 (434)
.|++++.++.+.++..+++ .+.+.+++++.+|.+|+|+|..|..
T Consensus 200 ~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 8999999999999876544 4667788899999999999988764
No 213
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.34 E-value=1.7e-06 Score=82.84 Aligned_cols=99 Identities=21% Similarity=0.407 Sum_probs=75.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCe--EEEEeeCCccCCc--ccCHHHH---------HHHHHHHHHcCcEEEcCCeEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNID--VSMVYPEPWCMPR--LFTADIA---------AFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~--v~~~~~~~~~~~~--~~~~~~~---------~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
++++|||+|+.|+.+|..|.+.|.+ |+++++.+.+.-. .+...+. ....+.+++.||+++.++++..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 4899999999999999999999987 9999887653211 0111111 1123456788999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChh
Q 013890 231 FTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
++. +.+ .|.+.+|+++.+|.+|+|||.+|...
T Consensus 83 id~--~~~--~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 83 LDV--QTR--TISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEEECCCCEEECCEEEEccCCcccCC
Confidence 986 332 57788999999999999999877643
No 214
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.34 E-value=1.4e-06 Score=79.59 Aligned_cols=36 Identities=31% Similarity=0.357 Sum_probs=32.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~ 43 (434)
.+||+|||||++|+++|..|++. |++ |+|+|+.+..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~---V~v~e~~~~~ 102 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCe---EEEEecCccc
Confidence 46999999999999999999998 776 9999998754
No 215
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.34 E-value=2.4e-06 Score=81.49 Aligned_cols=102 Identities=20% Similarity=0.328 Sum_probs=75.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc-----ccCHHHHH----------------------------
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR-----LFTADIAA---------------------------- 209 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~-----~~~~~~~~---------------------------- 209 (434)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... .+.+...+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987653111 01222111
Q ss_pred ---------------HHHHHHHH--cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChh
Q 013890 210 ---------------FYEGYYAN--KGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 210 ---------------~~~~~l~~--~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
.+.+.|.+ .|++++++++|++++.++++ ..+++.+|+++.+|+||.|.|......
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S~vr 156 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET--VQMRFSDGTKAEANWVIGADGGASVVR 156 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC--EEEEETTSCEEEESEEEECCCTTCHHH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE--EEEEECCCCEEECCEEEECCCcchhHH
Confidence 12222222 38999999999999874444 468889999999999999999876543
No 216
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.34 E-value=5.4e-06 Score=82.12 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=29.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 197 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~ 197 (434)
-.|+|||+|..|+-+|..+++ |.+|.++++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 479999999999999999999 999999987753
No 217
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.33 E-value=8.3e-07 Score=86.08 Aligned_cols=100 Identities=20% Similarity=0.230 Sum_probs=74.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
..++++|||+|++|+.+|..|++.|.+ |+++|+.+...-. . ++. .......+.++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~~-------~--------~~~-------~~~~~l~~~l~ 202 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKK---VTVIDILDRPLGV-------Y--------LDK-------EFTDVLTEEME 202 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTT-------T--------CCH-------HHHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCe---EEEEecCcccccc-------c--------CCH-------HHHHHHHHHHH
Confidence 357999999999999999999999876 9999998642100 0 000 00123456677
Q ss_pred HCCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCcccc
Q 013890 84 EKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~p 129 (434)
+.|++++.++.+..++.+++ .+.+ ++.++.+|.+|+|+|.+|..+
T Consensus 203 ~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~ 249 (447)
T 1nhp_A 203 ANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPNTA 249 (447)
T ss_dssp TTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEESCG
T ss_pred hCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCChH
Confidence 78999999999999987643 2444 567899999999999988654
No 218
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.33 E-value=6e-06 Score=76.59 Aligned_cols=100 Identities=11% Similarity=0.058 Sum_probs=72.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc----------------c---cCHHHHHHHHH-----------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------L---FTADIAAFYEG----------- 213 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~----------------~---~~~~~~~~~~~----------- 213 (434)
.+|+|||+|++|+.+|..|++.|.+|+++++.+..... . ..+.+.+.+.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 47999999999999999999999999999987543110 0 12222222222
Q ss_pred --------------------------------HHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEE-cCEEEEccC
Q 013890 214 --------------------------------YYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLE-ADIVVVGVG 260 (434)
Q Consensus 214 --------------------------------~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~-~d~vv~a~G 260 (434)
.+. .|++++++++|++++.++++ ..|++.+|+.+. +|.||.|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~a~~vV~a~g 159 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEH--WNLLDAEGQNHGPFSHVIIATP 159 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSC--EEEEETTSCEEEEESEEEECSC
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCE--EEEEeCCCcCccccCEEEEcCC
Confidence 222 38999999999999875444 467888898765 999999999
Q ss_pred CccChh
Q 013890 261 GRPLIS 266 (434)
Q Consensus 261 ~~p~~~ 266 (434)
......
T Consensus 160 ~~~~~~ 165 (336)
T 1yvv_A 160 APQAST 165 (336)
T ss_dssp HHHHGG
T ss_pred HHHHHH
Confidence 654433
No 219
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.31 E-value=6.7e-07 Score=90.63 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=33.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHH-cCCCCCcEEEEeCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAK-QGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~~~~V~vie~~~~ 42 (434)
..+||+|||||++|+++|..|++ .|.+ |+|||+.+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~---V~viEr~~~ 67 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIR---TCIVEQKEG 67 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSC---EEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCC---EEEEeCCCC
Confidence 45899999999999999999999 8987 999999865
No 220
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.31 E-value=1.5e-06 Score=84.62 Aligned_cols=99 Identities=15% Similarity=0.205 Sum_probs=73.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+|+++.+..... ....+ .....+.+++
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~~------------~~~~~-----------~~~l~~~l~~ 222 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAE---VTLIEYMPEILPQ------------GDPET-----------AALLRRALEK 222 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSSTT------------SCHHH-----------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCe---EEEEEcCCccccc------------cCHHH-----------HHHHHHHHHh
Confidence 36899999999999999999999876 9999998542100 00000 1234566778
Q ss_pred CCcEEEcCCeEEEEeCCCCE--EEcC-C--Cc--EEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASKT--LLSA-T--GL--IFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~-~--~~--~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..++.+++. +.+. + ++ ++.+|.+|+|+|.+|...
T Consensus 223 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 223 EGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred cCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 89999999999999865543 4443 5 65 899999999999888654
No 221
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.31 E-value=1.8e-06 Score=83.67 Aligned_cols=99 Identities=14% Similarity=0.007 Sum_probs=75.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+...- . ++. .......+.+++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~---~-------------~~~-------~~~~~l~~~l~~ 220 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAK---THLFEMFDAPLP---S-------------FDP-------MISETLVEVMNA 220 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSST---T-------------SCH-------HHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCE---EEEEEeCCchhh---h-------------hhH-------HHHHHHHHHHHH
Confidence 46899999999999999999999876 999999854210 0 000 001234566778
Q ss_pred CCcEEEcCCeEEEEeCCC---CEEEcCCCcEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+.+++.++ ..+.+.+++++.+|.+|+|+|.+|...
T Consensus 221 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 221 EGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp HSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred CCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 899999999999998653 257777888899999999999988653
No 222
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.31 E-value=3.9e-06 Score=77.04 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=75.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc---C----------------C-cccCHHHHHHHHHHHHHcCcEEEc
Q 013890 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC---M----------------P-RLFTADIAAFYEGYYANKGIKIIK 224 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~---~----------------~-~~~~~~~~~~~~~~l~~~gV~~~~ 224 (434)
.++|||+|+.|+.+|..++++|.+|+++++.... + + ....+++.+.+.+.+++.++++..
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIIT 85 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEE
Confidence 6899999999999999999999999999875420 0 0 011256788888889999999886
Q ss_pred CCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 225 GTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 225 ~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
.. +..... +.....+.+.++.++.+|.+|+|||.+|..
T Consensus 86 ~~-v~~~~~--~~~~~~~~~~~~~~~~~~~liiATG~~~~~ 123 (314)
T 4a5l_A 86 ET-IDHVDF--STQPFKLFTEEGKEVLTKSVIIATGATAKR 123 (314)
T ss_dssp CC-EEEEEC--SSSSEEEEETTCCEEEEEEEEECCCEEECC
T ss_pred eE-EEEeec--CCCceEEEECCCeEEEEeEEEEcccccccc
Confidence 64 555554 223345677888899999999999987754
No 223
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.30 E-value=1.2e-06 Score=85.24 Aligned_cols=97 Identities=21% Similarity=0.296 Sum_probs=72.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||++|+.+|..|++.|.+ |+++++.+... +. + ...+ .....+.+++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~~-----~----~~~~-----------~~~l~~~l~~ 224 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQ---VSVVEARERIL---PT-----Y----DSEL-----------TAPVAESLKK 224 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSSS---TT-----S----CHHH-----------HHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCe---EEEEEcCCccc---cc-----c----CHHH-----------HHHHHHHHHH
Confidence 46899999999999999999999876 99999986421 00 0 0000 1233566778
Q ss_pred CCcEEEcCCeEEEEeCCCCEEEcC--CC--cEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASKTLLSA--TG--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~--~~--~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..++. ++ +.+. +| .++.+|.+|+|+|.+|..+
T Consensus 225 ~gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~ 271 (458)
T 1lvl_A 225 LGIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRRPRTK 271 (458)
T ss_dssp HTCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEEECCS
T ss_pred CCCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCCcCCC
Confidence 8999999999999987 43 4332 45 6899999999999988754
No 224
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.29 E-value=1.6e-06 Score=84.16 Aligned_cols=101 Identities=12% Similarity=0.229 Sum_probs=73.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEeeCCccC--Cc----ccCH------HHHHHHHHHHHHcCcEEEcCCeEE
Q 013890 164 GKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCM--PR----LFTA------DIAAFYEGYYANKGIKIIKGTVAV 229 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~--g~~v~~~~~~~~~~--~~----~~~~------~~~~~~~~~l~~~gV~~~~~~~v~ 229 (434)
++++|||+|+.|+.+|..|++. |.+|+++++.+.+. +. .... ++.....+.+++.|++++.++++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 89999999887543 11 0111 111114467788999999999999
Q ss_pred EEEecCCCcEEEEE-eCCCcEEEcCEEEEccCCccChh
Q 013890 230 GFTTNADGEVNEVK-LKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 230 ~i~~~~~g~~~~v~-~~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
+++. +.....+. ..+++++.+|.+|+|||.+|...
T Consensus 83 ~id~--~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 83 AMDV--ENQLIAWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEET--TTTEEEEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEEC--CCCEEEEEecCceEEEEcCEEEECCCcccCCC
Confidence 9986 33333343 23556899999999999988653
No 225
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.29 E-value=1.1e-05 Score=74.21 Aligned_cols=167 Identities=14% Similarity=0.121 Sum_probs=105.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCeEEEEeeCCccCCc---------------------------------c----c
Q 013890 163 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPR---------------------------------L----F 203 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~--g~~v~~~~~~~~~~~~---------------------------------~----~ 203 (434)
...++|||+|+.|+.+|..|++. |.+|+++++.+.+... + .
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 45899999999999999999997 9999999987533200 0 0
Q ss_pred CHHHHHHHHHHHHH-cCcEEEcCCeEEEEEecCC----------------C--cEEEEEeC--------------CCcEE
Q 013890 204 TADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNAD----------------G--EVNEVKLK--------------DGRTL 250 (434)
Q Consensus 204 ~~~~~~~~~~~l~~-~gV~~~~~~~v~~i~~~~~----------------g--~~~~v~~~--------------~g~~i 250 (434)
..++.+.+.+.+++ .|++++.++.+.++..+++ + ++.+|... +..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 13444666666777 5999999999998875332 3 56666542 23479
Q ss_pred EcCEEEEccCCccCh-hhh-----hccccc-cCC--cEE--------eCCCCCCCCCceEEecccccccccccCcccccc
Q 013890 251 EADIVVVGVGGRPLI-SLF-----KGQVAE-NKG--GIE--------TDDFFKTSADDVYAVGDVATFPMKLYREMRRVE 313 (434)
Q Consensus 251 ~~d~vv~a~G~~p~~-~~~-----~~~~~~-~~g--~i~--------vd~~~~t~~~~iya~Gd~~~~~~~~~~~~~~~~ 313 (434)
.++.||.|+|..... .++ ..++.. -.| ... |+.+-+. +|++|++|=.+.... |.++--+
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v-~~gl~~~gm~~~~~~---g~~rmgp 314 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREI-VPGLIVGGMELSEID---GANRMGP 314 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE-ETTEEECGGGHHHHH---TCEECCS
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceE-cCCEEEechhhHhhc---CCCCCCc
Confidence 999999999976552 111 122221 111 122 2223233 799999997775321 2222113
Q ss_pred cHHHHHHHHHHHHHHHhccC
Q 013890 314 HVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 314 ~~~~A~~~g~~aa~~i~~~~ 333 (434)
.+..=...|+.||+.|+..+
T Consensus 315 ~fg~m~~sg~~~a~~~~~~~ 334 (344)
T 3jsk_A 315 TFGAMALSGVKAAHEAIRVF 334 (344)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred ccceeeecCHHHHHHHHHHH
Confidence 33333467888888877543
No 226
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.28 E-value=1.9e-06 Score=82.71 Aligned_cols=99 Identities=14% Similarity=0.154 Sum_probs=76.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|..|+.+|..|++.|.+ |+++++.+..... .++. .....+.+.+++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtvv~~~~~~l~~---------------~~~~-------~~~~~l~~~l~~ 206 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVN---VTLLEALPRVLAR---------------VAGE-------ALSEFYQAEHRA 206 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTT---------------TSCH-------HHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCe---EEEEecCCchhhh---------------hcCH-------HHHHHHHHHHHh
Confidence 46899999999999999999999876 9999998642100 0000 001234566778
Q ss_pred CCcEEEcCCeEEEEeCCCC---EEEcCCCcEEEeceEEEccCCCccc
Q 013890 85 KGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~lilAtG~~~~~ 128 (434)
.|++++.++.+..+..++. .|.+.+++++.+|.+|+|+|..|..
T Consensus 207 ~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 207 HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESC
T ss_pred CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 9999999999999987543 4777889999999999999998864
No 227
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.28 E-value=2.3e-06 Score=83.30 Aligned_cols=99 Identities=17% Similarity=0.195 Sum_probs=75.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||..|+.+|..|++.|.+ |+++++.+.... .+.. .......+.+++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~---Vtlv~~~~~~l~----------------~~~~-------~~~~~l~~~l~~ 219 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSE---VTVVALEDRLLF----------------QFDP-------LLSATLAENMHA 219 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSST----------------TSCH-------HHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCE---EEEEEcCCcccc----------------ccCH-------HHHHHHHHHHHH
Confidence 36899999999999999999999876 999998854210 0000 001234566788
Q ss_pred CCcEEEcCCeEEEEeCCC--CEEEcCCCc-EEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIAS--KTLLSATGL-IFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~--~~v~~~~~~-~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..++.++ ..+.+.+++ ++.+|.+|+|+|.+|...
T Consensus 220 ~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 220 QGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp TTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCT
T ss_pred CCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCC
Confidence 999999999999997644 356677888 899999999999988653
No 228
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.28 E-value=1.7e-06 Score=83.86 Aligned_cols=100 Identities=20% Similarity=0.361 Sum_probs=71.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCeEEEEeeCCccCC------ccc-----CHHHHHHHHHHH-HHcCcEEEcCCeE
Q 013890 163 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMP------RLF-----TADIAAFYEGYY-ANKGIKIIKGTVA 228 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~--g~~v~~~~~~~~~~~------~~~-----~~~~~~~~~~~l-~~~gV~~~~~~~v 228 (434)
.++++|||+|+.|+.+|..|++. +.+|+++++.+.+.. ..+ ..++.....+.+ ++.||+++.++++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 46899999999999999999998 789999998874321 000 111222222333 6889999999999
Q ss_pred EEEEecCCCcEEEEEeCCC-cEEEcCEEEEccCCccChh
Q 013890 229 VGFTTNADGEVNEVKLKDG-RTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 229 ~~i~~~~~g~~~~v~~~~g-~~i~~d~vv~a~G~~p~~~ 266 (434)
..++. ++ ..+.+.++ .++.+|.+|+|||.+|...
T Consensus 83 ~~i~~--~~--~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 83 IEVDT--GY--VRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EEECS--SE--EEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred EEEec--CC--CEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 98864 22 45667777 4799999999999887643
No 229
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.28 E-value=6.9e-06 Score=81.82 Aligned_cols=99 Identities=15% Similarity=0.063 Sum_probs=76.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc-cC-----------------------Cc------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-CM-----------------------PR------------------ 201 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~-~~-----------------------~~------------------ 201 (434)
-.|+|||+|..|+++|..+++.|.+|.++++.+. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999987631 10 00
Q ss_pred -----------ccC-HHHHHHHHHHHHH-cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccC
Q 013890 202 -----------LFT-ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 202 -----------~~~-~~~~~~~~~~l~~-~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~ 264 (434)
..+ ..+.+.+.+.+++ .|++++ +..|+.+.. +++.+.+|.+.+|.++.+|.||+|+|..+.
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 001 1355666777777 699995 568999976 456777899999988999999999997653
No 230
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.27 E-value=7.1e-06 Score=81.45 Aligned_cols=100 Identities=19% Similarity=0.139 Sum_probs=77.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc-cC-----------------------Cc------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-CM-----------------------PR------------------ 201 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~-~~-----------------------~~------------------ 201 (434)
-.|+|||+|..|+++|..+++.|.+|.++++.+. +. ..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4799999999999999999999999999987631 10 00
Q ss_pred -----------ccC-HHHHHHHHHHHHH-cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 202 -----------LFT-ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 202 -----------~~~-~~~~~~~~~~l~~-~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
..+ ..+.+.+.+.+++ .||+++ +..|+++.. +++.+.+|.+.+|.++.+|.||+|+|..++.
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 001 1345566677777 599995 678999876 4677778999999999999999999976543
No 231
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.26 E-value=1.8e-06 Score=83.91 Aligned_cols=99 Identities=16% Similarity=0.228 Sum_probs=72.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... |.+.. .......+.+++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l-------------------~~~~~----~~~~~l~~~l~~ 223 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTK---VTILEGAGEIL-------------------SGFEK----QMAAIIKKRLKK 223 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSS-------------------TTSCH----HHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---EEEEEcCCccc-------------------cccCH----HHHHHHHHHHHH
Confidence 46899999999999999999999876 99999985421 00000 001234566778
Q ss_pred CCcEEEcCCeEEEEeCCCCE--EEcC---CCcEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASKT--LLSA---TGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~---~~~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..++.+.+. +.+. ++.++.+|.+|+|+|.+|..+
T Consensus 224 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 224 KGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp TTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred CCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 89999999999999865543 3332 456799999999999988653
No 232
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.26 E-value=3.5e-06 Score=77.34 Aligned_cols=101 Identities=15% Similarity=0.054 Sum_probs=74.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEE-EeeCCc---c--------CCc----ccCHHHHHHHHHHHHHcCcEEEcCC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSM-VYPEPW---C--------MPR----LFTADIAAFYEGYYANKGIKIIKGT 226 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~-~~~~~~---~--------~~~----~~~~~~~~~~~~~l~~~gV~~~~~~ 226 (434)
..+++|||+|+.|+.+|..|++.|.+|++ +++... + .+. ....++...+.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV- 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC-
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE-
Confidence 46899999999999999999999999999 887321 0 111 112578888889999999999998
Q ss_pred eEEEEEecCCCcEEEE-EeCCCcEEEcCEEEEccCCccChh
Q 013890 227 VAVGFTTNADGEVNEV-KLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 227 ~v~~i~~~~~g~~~~v-~~~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
++.++ .+++.....+ ...++ ++.+|.+|+|+|.+|...
T Consensus 83 ~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 83 GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 78888 5331122343 22344 899999999999877643
No 233
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.26 E-value=5.2e-06 Score=78.98 Aligned_cols=102 Identities=16% Similarity=0.179 Sum_probs=77.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc------CCcc-----------------------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC------MPRL----------------------------------- 202 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~------~~~~----------------------------------- 202 (434)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.. ....
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 37999999999999999999999999999987631 0000
Q ss_pred -----------------cC-HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEe-CCCc--EEEcCEEEEccCC
Q 013890 203 -----------------FT-ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKL-KDGR--TLEADIVVVGVGG 261 (434)
Q Consensus 203 -----------------~~-~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~-~~g~--~i~~d~vv~a~G~ 261 (434)
++ ..+.+.+.+.+.+.|++++.+++|+++..++++. ..|++ .+|+ ++.+|+||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~-~~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGER-PYVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSS-CEEEEEETTEEEEEECSEEEECCCT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCc-eEEEEecCCcEEEEEeCEEEECCCC
Confidence 01 2355566777778899999999999998633233 34666 6786 7999999999998
Q ss_pred ccChh
Q 013890 262 RPLIS 266 (434)
Q Consensus 262 ~p~~~ 266 (434)
.....
T Consensus 162 ~S~vr 166 (394)
T 1k0i_A 162 HGISR 166 (394)
T ss_dssp TCSTG
T ss_pred CcHHH
Confidence 77653
No 234
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.25 E-value=2.1e-06 Score=86.27 Aligned_cols=103 Identities=17% Similarity=0.190 Sum_probs=76.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCeEEEEeeCCccCC-----------cccC--HHHHHHHHHHHHHcCcEEEcCC
Q 013890 162 KNGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMP-----------RLFT--ADIAAFYEGYYANKGIKIIKGT 226 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~--g~~v~~~~~~~~~~~-----------~~~~--~~~~~~~~~~l~~~gV~~~~~~ 226 (434)
..++++|||+|+.|+.+|..|++. |.+|+++++.+.+.- ...+ ..+...+....++.|+++++++
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 457899999999999999999998 899999998876321 0001 1123345556678899999999
Q ss_pred eEEEEEecCCCcEEEEEe-CCCc--EEEcCEEEEccCCccChh
Q 013890 227 VAVGFTTNADGEVNEVKL-KDGR--TLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 227 ~v~~i~~~~~g~~~~v~~-~~g~--~i~~d~vv~a~G~~p~~~ 266 (434)
.|.+++. ++....+.. .+|+ ++.+|.+|+|||.+|...
T Consensus 115 ~V~~id~--~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 115 EVVKINK--EEKTITIKNVTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEEEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEEEC--CCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCC
Confidence 9999986 333334433 4565 789999999999877643
No 235
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.24 E-value=6.1e-06 Score=78.06 Aligned_cols=56 Identities=20% Similarity=0.140 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccC
Q 013890 206 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 206 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~ 264 (434)
.+.+.+.+.+++.|++++.+++|+++..+ ++.+ .|.+.+| ++.+|.||+|+|....
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTH
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHH
Confidence 45667778888899999999999999873 4444 6777777 8999999999997643
No 236
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.24 E-value=8.5e-07 Score=83.49 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=35.6
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
||++++||+|||||++|+++|++|+++|++ |+|||+...
T Consensus 2 ~m~~~~dVvVIG~Gi~Gls~A~~La~~G~~---V~vle~~~~ 40 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIGLSSALILARKGYS---VHILARDLP 40 (363)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSCT
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHhCCCE---EEEEeccCC
Confidence 677789999999999999999999999986 999999863
No 237
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.24 E-value=3.2e-06 Score=81.58 Aligned_cols=96 Identities=14% Similarity=0.206 Sum_probs=75.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+-+|..+++.|.+ |+++++.+...-. ..... .....+.+++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~ll~~------------~d~~~-----------~~~~~~~l~~ 200 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLH---PTLIHRSDKINKL------------MDADM-----------NQPILDELDK 200 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCE---EEEEESSSCCSTT------------SCGGG-----------GHHHHHHHHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCc---ceeeeeecccccc------------ccchh-----------HHHHHHHhhc
Confidence 35899999999999999999999876 9999998642100 00000 1345677888
Q ss_pred CCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCccc
Q 013890 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~ 128 (434)
.|++++.++.+..++ ...+.+.+++++.+|.+++|+|.+|..
T Consensus 201 ~gV~i~~~~~v~~~~--~~~v~~~~g~~~~~D~vl~a~G~~Pn~ 242 (437)
T 4eqs_A 201 REIPYRLNEEINAIN--GNEITFKSGKVEHYDMIIEGVGTHPNS 242 (437)
T ss_dssp TTCCEEESCCEEEEE--TTEEEETTSCEEECSEEEECCCEEESC
T ss_pred cceEEEeccEEEEec--CCeeeecCCeEEeeeeEEEEeceecCc
Confidence 999999999999876 456888899999999999999988864
No 238
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.22 E-value=7.3e-06 Score=79.52 Aligned_cols=101 Identities=20% Similarity=0.254 Sum_probs=78.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCC------c------------------------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP------R------------------------------------ 201 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~------~------------------------------------ 201 (434)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4799999999999999999999999999998754210 0
Q ss_pred ---------ccC-HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeC---CCc--EEEcCEEEEccCCccCh
Q 013890 202 ---------LFT-ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLK---DGR--TLEADIVVVGVGGRPLI 265 (434)
Q Consensus 202 ---------~~~-~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~---~g~--~i~~d~vv~a~G~~p~~ 265 (434)
.++ ..+.+.+.+.+++.|++++.+++|+++.. +++.+.+|.+. +|+ ++.+|.||.|+|.....
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 001 24667777788889999999999999986 34555555554 675 79999999999976654
No 239
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.22 E-value=1.1e-05 Score=76.95 Aligned_cols=101 Identities=15% Similarity=0.157 Sum_probs=73.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc------ccCHHHH-----------------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------LFTADIA----------------------------- 208 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~------~~~~~~~----------------------------- 208 (434)
-||+|||+|+.|+-+|..|++.|.+|+++++.+.+... .+.+...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 37999999999999999999999999999986543211 0111111
Q ss_pred ------------------------------HHHHHHH-HHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 013890 209 ------------------------------AFYEGYY-ANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVV 257 (434)
Q Consensus 209 ------------------------------~~~~~~l-~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~ 257 (434)
..+.+.| +..+.++++++++++++..+++.+ .+.++||+++++|+||-
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVg 160 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVG 160 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEE
Confidence 1122222 223456888999999987556554 68899999999999999
Q ss_pred ccCCccCh
Q 013890 258 GVGGRPLI 265 (434)
Q Consensus 258 a~G~~p~~ 265 (434)
|-|.+...
T Consensus 161 ADG~~S~v 168 (412)
T 4hb9_A 161 ADGSNSKV 168 (412)
T ss_dssp CCCTTCHH
T ss_pred CCCCCcch
Confidence 99987654
No 240
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.22 E-value=1.1e-05 Score=80.26 Aligned_cols=98 Identities=17% Similarity=0.174 Sum_probs=76.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC--------Cc------------ccC----------------HHH
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM--------PR------------LFT----------------ADI 207 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~--------~~------------~~~----------------~~~ 207 (434)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. .+. +++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999865321 00 011 345
Q ss_pred HHHHHHHHHHcC--cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCC
Q 013890 208 AAFYEGYYANKG--IKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGG 261 (434)
Q Consensus 208 ~~~~~~~l~~~g--V~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~ 261 (434)
.+.+.+..++.+ ++++++++|.+++.++++....|.+++|+++.+|.||+|+|.
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 556666666665 678999999999875544456788899989999999999995
No 241
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.20 E-value=3.2e-06 Score=82.36 Aligned_cols=102 Identities=17% Similarity=0.164 Sum_probs=76.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCC-----CeEEEEeeCCccCCc--------------------------------------
Q 013890 165 KAVVVGGGYIGLELSAALKINN-----IDVSMVYPEPWCMPR-------------------------------------- 201 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g-----~~v~~~~~~~~~~~~-------------------------------------- 201 (434)
+++|||+|+.|+.+|..|.+.| .+|+++++.+.+.-.
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 7999999999999999999999 999999887632100
Q ss_pred ----------c--cCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCC-CcE--EEEEeCCCc----EEEcCEEEEccCCc
Q 013890 202 ----------L--FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD-GEV--NEVKLKDGR----TLEADIVVVGVGGR 262 (434)
Q Consensus 202 ----------~--~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~-g~~--~~v~~~~g~----~i~~d~vv~a~G~~ 262 (434)
. ...++.+.+....++.+++++++++|.+++..++ +.. ..|.+.+|+ ++.+|.||+|+|..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 0 0134455666666777999999999999986321 332 256666665 89999999999987
Q ss_pred cChh
Q 013890 263 PLIS 266 (434)
Q Consensus 263 p~~~ 266 (434)
|...
T Consensus 192 p~~p 195 (463)
T 3s5w_A 192 PRIP 195 (463)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 7643
No 242
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.19 E-value=3.6e-06 Score=82.16 Aligned_cols=102 Identities=20% Similarity=0.244 Sum_probs=64.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCeEEEEeeCCccC------CcccC------HHH-------HHHHHHHHHHcCcE
Q 013890 163 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCM------PRLFT------ADI-------AAFYEGYYANKGIK 221 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~--g~~v~~~~~~~~~~------~~~~~------~~~-------~~~~~~~l~~~gV~ 221 (434)
.++++|||+|+.|+.+|..|++. |.+|+++++.+.+. +..+. .++ ........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 36899999999999999999998 89999999887631 11111 111 22222233358999
Q ss_pred EEcCCeEEEEEecCCCcEEEEEe-CCCc--EEEcCEEEEccCCccChh
Q 013890 222 IIKGTVAVGFTTNADGEVNEVKL-KDGR--TLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 222 ~~~~~~v~~i~~~~~g~~~~v~~-~~g~--~i~~d~vv~a~G~~p~~~ 266 (434)
++.++++.+++. ++....+.. .+|+ ++.+|.+|+|||.+|...
T Consensus 83 ~~~~~~V~~id~--~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 83 ALVETRAHAIDR--AAHTVEIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp EECSEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEECCEEEEEEC--CCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 999999999986 333333433 3465 789999999999877643
No 243
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.19 E-value=1e-05 Score=80.84 Aligned_cols=102 Identities=19% Similarity=0.240 Sum_probs=79.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCC------------------------------------------
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP------------------------------------------ 200 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------ 200 (434)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 46899999999999999999999999999987631100
Q ss_pred ------------------c--cc-CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeC-CC--cEEEcCEEE
Q 013890 201 ------------------R--LF-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLK-DG--RTLEADIVV 256 (434)
Q Consensus 201 ------------------~--~~-~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~-~g--~~i~~d~vv 256 (434)
. .+ ...+.+.+.+.+++.||+++.+++|+++..+ ++....|.+. +| .++.+|+||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV 181 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVI 181 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEE
Confidence 0 01 1346667788888899999999999999863 4555677776 66 579999999
Q ss_pred EccCCccCh
Q 013890 257 VGVGGRPLI 265 (434)
Q Consensus 257 ~a~G~~p~~ 265 (434)
.|+|.....
T Consensus 182 ~AdG~~S~l 190 (591)
T 3i3l_A 182 DAGGSGGPI 190 (591)
T ss_dssp ECCGGGCHH
T ss_pred ECCCCcchh
Confidence 999986643
No 244
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.19 E-value=1.8e-05 Score=79.22 Aligned_cols=102 Identities=21% Similarity=0.327 Sum_probs=80.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHC------CCeEEEEeeCCccCCc------------------------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKIN------NIDVSMVYPEPWCMPR------------------------------------ 201 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~------g~~v~~~~~~~~~~~~------------------------------------ 201 (434)
-.|+|||+|+.|+-+|..|++. |.+|+++++.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999998 9999999876432100
Q ss_pred --------cc---C--------------HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeC------CC---
Q 013890 202 --------LF---T--------------ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLK------DG--- 247 (434)
Q Consensus 202 --------~~---~--------------~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~------~g--- 247 (434)
.+ + ..+.+.+.+.+++.||++++++.+.++..++++.+.+|.+. +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 00 1 14566778888889999999999999987556777778776 33
Q ss_pred ------cEEEcCEEEEccCCccCh
Q 013890 248 ------RTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 248 ------~~i~~d~vv~a~G~~p~~ 265 (434)
.++.+|.||.|.|.....
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCHH
T ss_pred cccCCceEEECCEEEEeeCCCchH
Confidence 689999999999987754
No 245
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.18 E-value=4.8e-06 Score=81.44 Aligned_cols=98 Identities=15% Similarity=0.188 Sum_probs=74.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+-+|..|++.|.+ |+++++.+...- .+ ...+ .....+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l~---~~---------d~~~-----------~~~l~~~l~~ 238 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSE---THLVIRGETVLR---KF---------DECI-----------QNTITDHYVK 238 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCE---EEEECSSSSSCT---TS---------CHHH-----------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---eEEEEeCCcccc---cc---------CHHH-----------HHHHHHHHHh
Confidence 36899999999999999999999876 999999854210 00 0000 1234566778
Q ss_pred CCcEEEcCCeEEEEeCCC----CEEEcCCC-cEEEeceEEEccCCCccc
Q 013890 85 KGIELILSTEIVRADIAS----KTLLSATG-LIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~----~~v~~~~~-~~~~~d~lilAtG~~~~~ 128 (434)
.|++++.++.+..+..+. ..+.+.+| .++.+|.+|+|+|.+|..
T Consensus 239 ~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 239 EGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred CCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 899999999999997642 25677788 789999999999988865
No 246
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=6.9e-06 Score=80.74 Aligned_cols=98 Identities=16% Similarity=0.191 Sum_probs=74.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+-+|..|++.|.+ |+++++.+... +. + ...+ .....+.+++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l---~~-----~----d~~~-----------~~~l~~~l~~ 229 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGID---SYIFARGNRIL---RK-----F----DESV-----------INVLENDMKK 229 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCE---EEEECSSSSSC---TT-----S----CHHH-----------HHHHHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCe---EEEEecCCccC---cc-----c----chhh-----------HHHHHHHHHh
Confidence 36899999999999999999998876 99999975421 00 0 0000 1234567788
Q ss_pred CCcEEEcCCeEEEEeCCC---CEEEcCCCcE-EEeceEEEccCCCccc
Q 013890 85 KGIELILSTEIVRADIAS---KTLLSATGLI-FKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~---~~v~~~~~~~-~~~d~lilAtG~~~~~ 128 (434)
.|++++.++.+..++.+. ..+.+.++++ +.+|.+|+|+|.+|..
T Consensus 230 ~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 230 NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp TTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred CCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 999999999999998643 2567778877 9999999999998875
No 247
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.17 E-value=4.9e-06 Score=81.65 Aligned_cols=98 Identities=14% Similarity=0.229 Sum_probs=75.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc---CCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQ---GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEW 81 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~---g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (434)
..+++|||+|..|+-+|..|++. |.+ |+++++.+... +. + . +. ......+.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~---Vtlv~~~~~~l---~~-----~----d---~~--------~~~~l~~~ 244 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGK---VTLCYRNNLIL---RG-----F----D---ET--------IREEVTKQ 244 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCE---EEEEESSSSSC---TT-----S----C---HH--------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCe---EEEEEcCCccc---cc-----c----C---HH--------HHHHHHHH
Confidence 36899999999999999999998 765 99999985421 00 0 0 00 01234567
Q ss_pred HHHCCcEEEcCCeEEEEeCCC---CEEEcCCCcEEEeceEEEccCCCccc
Q 013890 82 YKEKGIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~lilAtG~~~~~ 128 (434)
+++.|++++.++.+..+..++ ..+.+.+++++.+|.+|+|+|.+|..
T Consensus 245 l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 245 LTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 788999999999999998653 25777788889999999999988865
No 248
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.17 E-value=1.2e-05 Score=73.69 Aligned_cols=98 Identities=14% Similarity=0.111 Sum_probs=73.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc---cC--------C---cccCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 013890 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPW---CM--------P---RLFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~---~~--------~---~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
.++|||+|+.|+.+|..+++.|.+|+++++... .+ + ....+++.........+.++.+..+.....
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 589999999999999999999999999987531 10 1 012356777777888888888888876665
Q ss_pred EEecCCCcEEEEEeCCCcEEEcCEEEEccCCccChh
Q 013890 231 FTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
... ... .+...+++++.+|.+|+|||.+|...
T Consensus 88 ~~~-~~~---~~~~~~~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 88 EDK-GEY---KVINFGNKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp EEC-SSC---EEEECSSCEEEEEEEEECCCEEECCC
T ss_pred eee-ecc---eeeccCCeEEEeceeEEcccCccCcC
Confidence 543 222 34556778999999999999877643
No 249
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.17 E-value=3.6e-06 Score=82.48 Aligned_cols=98 Identities=14% Similarity=0.210 Sum_probs=75.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc---CCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQ---GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEW 81 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~---g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (434)
..+++|||+|+.|+-+|..|++. |.+ |+++++.+... +. ++. .......+.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~---Vtlv~~~~~~l---~~-------------~d~-------~~~~~l~~~ 240 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQ---VDLAYRGDMIL---RG-------------FDS-------ELRKQLTEQ 240 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCE---EEEEESSSSSS---TT-------------SCH-------HHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCe---EEEEEcCCCcc---cc-------------cCH-------HHHHHHHHH
Confidence 36899999999999999999998 765 99999986421 00 000 001234566
Q ss_pred HHHCCcEEEcCCeEEEEeCCC---CEEEcCCCcEEEeceEEEccCCCccc
Q 013890 82 YKEKGIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~lilAtG~~~~~ 128 (434)
+++.|++++.++.+..+..++ ..+.+.+++++.+|.+|+|+|.+|..
T Consensus 241 l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 241 LRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 778999999999999998653 25677788889999999999988865
No 250
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.16 E-value=1.3e-05 Score=79.71 Aligned_cols=99 Identities=15% Similarity=0.307 Sum_probs=75.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc-cC-----------------------Cc------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-CM-----------------------PR------------------ 201 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~-~~-----------------------~~------------------ 201 (434)
-.|+|||+|..|+++|..+++.|.+|.++++.+. +. ..
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~~ 101 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLNR 101 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEECS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhccc
Confidence 4799999999999999999999999999987631 10 00
Q ss_pred -----------ccC-HHHHHHHHHHHHHc-CcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccC
Q 013890 202 -----------LFT-ADIAAFYEGYYANK-GIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 202 -----------~~~-~~~~~~~~~~l~~~-gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~ 264 (434)
..+ ..+...+.+.+++. ||+++.+ .|..+.. +++.+.+|.+.+|+++.+|.||+|+|..++
T Consensus 102 ~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 102 SKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp SSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred ccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 011 13455666777774 9999654 8888876 356677788999999999999999997654
No 251
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.15 E-value=1.8e-05 Score=79.01 Aligned_cols=101 Identities=24% Similarity=0.299 Sum_probs=77.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcc----------------------------------------
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL---------------------------------------- 202 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~---------------------------------------- 202 (434)
..+++|||+|..|+.+|..+++.|.+|+++++.+.+....
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 4589999999999999999999999999998765321100
Q ss_pred -----------------------------------------------cCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecC
Q 013890 203 -----------------------------------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 235 (434)
Q Consensus 203 -----------------------------------------------~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~ 235 (434)
....+.+.+.+.+++.||+++++++++++..++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~ 285 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA 285 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECC
Confidence 012345566777888999999999999997633
Q ss_pred CCcEEEEEeC--CCc--EEEcCEEEEccCCcc
Q 013890 236 DGEVNEVKLK--DGR--TLEADIVVVGVGGRP 263 (434)
Q Consensus 236 ~g~~~~v~~~--~g~--~i~~d~vv~a~G~~p 263 (434)
++++.+|... +|+ ++.+|.||+|+|..+
T Consensus 286 ~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 286 SGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp -CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred CCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 3777777665 664 689999999999554
No 252
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.14 E-value=6e-06 Score=76.92 Aligned_cols=95 Identities=16% Similarity=0.191 Sum_probs=69.6
Q ss_pred cEEEECCCHHHHHHHHHHHH---CCCeEEEEeeCCccCCc-------------------cc---CH---HH---------
Q 013890 165 KAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPWCMPR-------------------LF---TA---DI--------- 207 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~---~g~~v~~~~~~~~~~~~-------------------~~---~~---~~--------- 207 (434)
+|+|||+|..|+-+|..|++ .|.+|+++++.+..... ++ +. .+
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Confidence 69999999999999999999 99999999876432110 00 00 11
Q ss_pred -----------------------------HHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEc
Q 013890 208 -----------------------------AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVG 258 (434)
Q Consensus 208 -----------------------------~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a 258 (434)
...+....++.|++++++++|++++.++++ ..|.+.+|+++.+|.||+|
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vV~A 160 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK--WEVSKQTGSPEQFDLIVLT 160 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS--EEEEESSSCCEEESEEEEC
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEEC
Confidence 112223334448999999999999874444 4688888887899999999
Q ss_pred cCC
Q 013890 259 VGG 261 (434)
Q Consensus 259 ~G~ 261 (434)
++.
T Consensus 161 ~p~ 163 (342)
T 3qj4_A 161 MPV 163 (342)
T ss_dssp SCH
T ss_pred CCH
Confidence 983
No 253
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.14 E-value=5.3e-06 Score=81.16 Aligned_cols=99 Identities=15% Similarity=0.309 Sum_probs=73.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+...- . + .. . ......+.+++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~---~-----~----~~---~--------~~~~l~~~l~~ 236 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSK---VTVVEFQPQIGA---S-----M----DG---E--------VAKATQKFLKK 236 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSSS---S-----S----CH---H--------HHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCE---EEEEEeCCcccc---c-----c----CH---H--------HHHHHHHHHHH
Confidence 46899999999999999999999876 999999864210 0 0 00 0 01234566778
Q ss_pred CCcEEEcCCeEEEEeC--CCC--EEEcC-----CCcEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADI--ASK--TLLSA-----TGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~--~~~--~v~~~-----~~~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..++. +.+ .+.+. ++.++.+|.+|+|+|.+|...
T Consensus 237 ~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 237 QGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp TTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred CCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 9999999999999986 444 34443 346799999999999988654
No 254
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.14 E-value=1.2e-05 Score=76.82 Aligned_cols=101 Identities=25% Similarity=0.352 Sum_probs=76.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc----------------------------------------
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------------------------------------- 201 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~---------------------------------------- 201 (434)
+..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 3568999999999999999999999999999987532100
Q ss_pred -----cc-----------------CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEcc
Q 013890 202 -----LF-----------------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGV 259 (434)
Q Consensus 202 -----~~-----------------~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~ 259 (434)
.+ ...+.+.+.+.+++ ++++++++|++++.++++ ..+.+.+|+++.+|+||.|.
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEEcCCCEEeeCEEEECC
Confidence 00 01234455555544 889999999999874433 56888999999999999999
Q ss_pred CCccChh
Q 013890 260 GGRPLIS 266 (434)
Q Consensus 260 G~~p~~~ 266 (434)
|......
T Consensus 178 G~~S~vr 184 (407)
T 3rp8_A 178 GSHSALR 184 (407)
T ss_dssp CTTCSSH
T ss_pred CcChHHH
Confidence 9876654
No 255
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.13 E-value=3.6e-06 Score=82.03 Aligned_cols=99 Identities=16% Similarity=0.163 Sum_probs=73.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+-+|..|++.|.+ |+++++.+... |.+.. .......+.+++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l-------------------~~~~~----~~~~~l~~~l~~ 224 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVD---VTIVEFLPRAL-------------------PNEDA----DVSKEIEKQFKK 224 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS-------------------TTSCH----HHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCe---EEEEEcCCccc-------------------cccCH----HHHHHHHHHHHH
Confidence 46899999999999999999999876 99999985421 00000 001234566778
Q ss_pred CCcEEEcCCeEEEEeCCCC--EEEcC-CC--cEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASK--TLLSA-TG--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~-~~--~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..+..+.+ .+.+. ++ .++.+|.+++|+|.+|...
T Consensus 225 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 274 (464)
T 2a8x_A 225 LGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVE 274 (464)
T ss_dssp HTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCS
T ss_pred cCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCC
Confidence 8999999999999986553 34443 55 6799999999999888643
No 256
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.13 E-value=5.6e-06 Score=81.21 Aligned_cols=99 Identities=15% Similarity=0.240 Sum_probs=73.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+...- . . ++. .......+.+++
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l~------~-~--------~~~-------~~~~~l~~~l~~ 248 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKE---VVLIDVVDTCLA------G-Y--------YDR-------DLTDLMAKNMEE 248 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTT------T-T--------SCH-------HHHHHHHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCe---EEEEEcccchhh------h-H--------HHH-------HHHHHHHHHHHh
Confidence 46899999999999999999999876 999999864210 0 0 000 001234566778
Q ss_pred CCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+.+++.+++ .+.+ ++.++.+|.+|+|+|.+|..+
T Consensus 249 ~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 249 HGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp TTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEECCG
T ss_pred CCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcChH
Confidence 8999999999999986443 3554 677899999999999888643
No 257
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.13 E-value=2.2e-06 Score=83.91 Aligned_cols=98 Identities=13% Similarity=0.158 Sum_probs=73.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+-+|..|++.|.+ |+|+++.+...- . + ...+ .....+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~---Vtlv~~~~~~l~---~-----~----~~~~-----------~~~l~~~l~~ 238 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSR---LDVVEMMDGLMQ---G-----A----DRDL-----------VKVWQKQNEY 238 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCE---EEEECSSSSSST---T-----S----CHHH-----------HHHHHHHHGG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEECCcccc---c-----c----CHHH-----------HHHHHHHHHh
Confidence 46899999999999999999999876 999999854210 0 0 0000 1234566778
Q ss_pred CCcEEEcCCeEEEEeCCCC--EEEcCC----CcEEEeceEEEccCCCccc
Q 013890 85 KGIELILSTEIVRADIASK--TLLSAT----GLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~----~~~~~~d~lilAtG~~~~~ 128 (434)
.|++++.++.+..++.+++ .+.+.+ ++++.+|.+|+|+|.+|..
T Consensus 239 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 239 RFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp GEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred cCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 8999999999999976543 355555 6678999999999998865
No 258
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.12 E-value=7e-06 Score=80.98 Aligned_cols=98 Identities=10% Similarity=0.003 Sum_probs=75.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+-.|..+++.|.+ |+|+++....+.. ...+ .....+.+++
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~---VTii~~~~~L~~~-------------D~ei-----------~~~l~~~l~~ 275 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYD---VTVAVRSIVLRGF-------------DQQC-----------AVKVKLYMEE 275 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCC---EEEEESSCSSTTS-------------CHHH-----------HHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCe---EEEeccccccccc-------------chhH-----------HHHHHHHHHh
Confidence 46899999999999999999999987 9999876432110 0000 1234567888
Q ss_pred CCcEEEcCCeEEEEeCCCCE--EEcCCCcEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~lilAtG~~~~~p 129 (434)
.|+.++.+..+..+...... +...++..+.+|.+++|+|-+|...
T Consensus 276 ~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 276 QGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp TTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCG
T ss_pred hcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 99999999999988776654 4567778899999999999888754
No 259
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.12 E-value=8e-06 Score=79.77 Aligned_cols=100 Identities=13% Similarity=0.179 Sum_probs=73.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+...- . .++. .......+.+++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~------~---------~~~~-------~~~~~l~~~l~~ 232 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGAD---VTAVEFLGHVGG------V---------GIDM-------EISKNFQRILQK 232 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSSC------S---------SCCH-------HHHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCE---EEEEeccCccCC------c---------ccCH-------HHHHHHHHHHHH
Confidence 36899999999999999999999876 999999854210 0 0000 001234567778
Q ss_pred CCcEEEcCCeEEEEeCCCC---EEEc-----CCCcEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASK---TLLS-----ATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~---~v~~-----~~~~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..+..+++ .+.+ .++.++.+|.+|+|+|.+|...
T Consensus 233 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 233 QGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp TTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCT
T ss_pred CCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCC
Confidence 9999999999999986553 3332 3557899999999999888653
No 260
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.12 E-value=7.8e-06 Score=80.84 Aligned_cols=98 Identities=14% Similarity=0.216 Sum_probs=74.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHHC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
.+++|||+|..|+.+|..|++.|.+ |+++++.+...-. . ...+ .....+.+++.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~---Vtlv~~~~~~l~~---~---------~~~~-----------~~~l~~~l~~~ 268 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRR---TVMLVRTEPLKLI---K---------DNET-----------RAYVLDRMKEQ 268 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCTTTTC---C---------SHHH-----------HHHHHHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCe---EEEEEecCccccc---c---------cHHH-----------HHHHHHHHHhC
Confidence 6899999999999999999999876 9999998642100 0 0000 12345677889
Q ss_pred CcEEEcCCeEEEEeCC--C----CEEEcCCCc-EEEeceEEEccCCCcccc
Q 013890 86 GIELILSTEIVRADIA--S----KTLLSATGL-IFKYQILVIATGSTVLRL 129 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~--~----~~v~~~~~~-~~~~d~lilAtG~~~~~p 129 (434)
|++++.++.|.++..+ . ..+.+.+|+ ++.+|.+|+|+|.+|...
T Consensus 269 GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 269 GMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp TCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred CcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 9999999999999863 2 235666776 899999999999988753
No 261
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.11 E-value=3.8e-05 Score=70.21 Aligned_cols=167 Identities=16% Similarity=0.135 Sum_probs=105.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCeEEEEeeCCccCCcc-------------------------------------c
Q 013890 163 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPRL-------------------------------------F 203 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~--g~~v~~~~~~~~~~~~~-------------------------------------~ 203 (434)
..+++|||+|+.|+.+|..|++. |.+|+++++.+...... .
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 44899999999999999999998 99999999865432100 0
Q ss_pred CHHHHHHHHHHHHHc-CcEEEcCCeEEEEEecC--C-C--cEEEEEeC--------------CCcEEEc-----------
Q 013890 204 TADIAAFYEGYYANK-GIKIIKGTVAVGFTTNA--D-G--EVNEVKLK--------------DGRTLEA----------- 252 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~-gV~~~~~~~v~~i~~~~--~-g--~~~~v~~~--------------~g~~i~~----------- 252 (434)
..++...+.+.+.+. ||+++.++.+.++..++ + + ++.+|.+. ++.++.+
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~ 224 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDL 224 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCS
T ss_pred hHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccc
Confidence 234455666666664 99999999999998743 3 4 77777652 3457999
Q ss_pred ----CEEEEccCCccCh-hhhhccc---ccc-----CCc--------EEeCCCCCC-CCCceEEecccccccccccCccc
Q 013890 253 ----DIVVVGVGGRPLI-SLFKGQV---AEN-----KGG--------IETDDFFKT-SADDVYAVGDVATFPMKLYREMR 310 (434)
Q Consensus 253 ----d~vv~a~G~~p~~-~~~~~~~---~~~-----~g~--------i~vd~~~~t-~~~~iya~Gd~~~~~~~~~~~~~ 310 (434)
+.||.|+|..... .++...+ ... ... ..|+..-.. -+|++|++|-.+.... +.++
T Consensus 225 ~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~r 301 (326)
T 2gjc_A 225 SQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELD---GLNR 301 (326)
T ss_dssp STTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHH---TCCB
T ss_pred cccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhc---CCCC
Confidence 9999999976543 2221111 000 011 122223331 5899999998874321 1111
Q ss_pred ccccHHHHHHHHHHHHHHHhcc
Q 013890 311 RVEHVDHARKSAEQAVKTIMAT 332 (434)
Q Consensus 311 ~~~~~~~A~~~g~~aa~~i~~~ 332 (434)
--+.+..-...|+.||+.|+..
T Consensus 302 ~g~~fg~m~~sg~~~a~~~~~~ 323 (326)
T 2gjc_A 302 MGPTFGAMALSGVHAAEQILKH 323 (326)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHH
T ss_pred CChhhhhhhhhhHHHHHHHHHH
Confidence 1122333346888999888754
No 262
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.11 E-value=5.1e-06 Score=80.63 Aligned_cols=100 Identities=16% Similarity=0.263 Sum_probs=73.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+...-. .++. .......+.+++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~---------------~~~~-------~~~~~l~~~l~~ 203 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYN---VNLIDGHERVLYK---------------YFDK-------EFTDILAKDYEA 203 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSTTTT---------------TSCH-------HHHHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCE---EEEEEcCCchhhh---------------hhhh-------hHHHHHHHHHHH
Confidence 46899999999999999999998876 9999998542100 0000 001234566788
Q ss_pred CCcEEEcCCeEEEEeCCCCEE--EcCCCcEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASKTL--LSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v--~~~~~~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+.++..++..+ ...++.++.+|.+|+|+|.+|...
T Consensus 204 ~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 204 HGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp TTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCG
T ss_pred CCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHH
Confidence 999999999999998634332 223778899999999999888643
No 263
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.10 E-value=1.1e-05 Score=79.31 Aligned_cols=98 Identities=13% Similarity=0.217 Sum_probs=74.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+.+|..+++.|.+ |+++++.+...- . ++. .......+.+++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l~------------~----~d~-------~~~~~l~~~l~~ 235 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVP---VTVVASQDHVLP------------Y----EDA-------DAALVLEESFAE 235 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCC---EEEECSSSSSSC------------C----SSH-------HHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEcCCcccc------------c----cCH-------HHHHHHHHHHHH
Confidence 36899999999999999999999876 999999854210 0 000 001234567788
Q ss_pred CCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCccc
Q 013890 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~ 128 (434)
.|++++.++.|..+..+++ .+...+++++.+|.+|+|+|.+|..
T Consensus 236 ~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 236 RGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp TTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred CCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 9999999999999986653 4555677889999999999998865
No 264
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.10 E-value=5e-06 Score=83.13 Aligned_cols=101 Identities=16% Similarity=0.201 Sum_probs=71.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEeeCCccCCcc--cC-----------HHHHHHHHHHHHHcCcEEEcCCeE
Q 013890 164 GKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPRL--FT-----------ADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~--g~~v~~~~~~~~~~~~~--~~-----------~~~~~~~~~~l~~~gV~~~~~~~v 228 (434)
++++|||+|+.|+.+|..|++. +.+|+++++.+.+.-.. ++ ..+.+......++.|++++++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5899999999999999999998 78999999887642100 00 011122333445589999999999
Q ss_pred EEEEecCCCcEEEEEe-CCCc--EEEcCEEEEccCCccChh
Q 013890 229 VGFTTNADGEVNEVKL-KDGR--TLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 229 ~~i~~~~~g~~~~v~~-~~g~--~i~~d~vv~a~G~~p~~~ 266 (434)
.+++. +++...+.. .+|+ ++.+|.+|+|||.+|...
T Consensus 82 ~~id~--~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 120 (565)
T 3ntd_A 82 VAIDR--AAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVP 120 (565)
T ss_dssp EEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEC--CCCEEEEEecCCCCeEEEECCEEEECCCCCCCCC
Confidence 99986 333333433 3354 789999999999877653
No 265
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.10 E-value=2.4e-05 Score=77.16 Aligned_cols=101 Identities=18% Similarity=0.250 Sum_probs=77.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc--------CCc----------------------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC--------MPR---------------------------------- 201 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~--------~~~---------------------------------- 201 (434)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.. .+.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 47999999999999999999999999999987510 000
Q ss_pred -------------------cc-CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEE--eCCCc--EEEcCEEEE
Q 013890 202 -------------------LF-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVK--LKDGR--TLEADIVVV 257 (434)
Q Consensus 202 -------------------~~-~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~--~~~g~--~i~~d~vv~ 257 (434)
.+ ...+.+.+.+.+++.||+++.+++|+++.. +++.+..|. ..+|+ ++.+|+||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 00 124556777788889999999999999987 455554444 45674 799999999
Q ss_pred ccCCccCh
Q 013890 258 GVGGRPLI 265 (434)
Q Consensus 258 a~G~~p~~ 265 (434)
|+|.....
T Consensus 167 AdG~~S~v 174 (512)
T 3e1t_A 167 ASGNRTRV 174 (512)
T ss_dssp CCCTTCSS
T ss_pred CCCcchHH
Confidence 99986543
No 266
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.09 E-value=1.9e-06 Score=83.48 Aligned_cols=90 Identities=16% Similarity=0.146 Sum_probs=70.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc-------CCcc-cCHHHHHHHHHHHHHcCcEEEcCCeEEEEEe
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC-------MPRL-FTADIAAFYEGYYANKGIKIIKGTVAVGFTT 233 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~-------~~~~-~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~ 233 (434)
..++++|||+|+.|+.+|..|++.|.+|+++++.+.+ .+.+ ++.++.+...+.+++.||++++++.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~--- 197 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGR--- 197 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEecc---
Confidence 3578999999999999999999999999999988654 2221 3667888888899999999999986520
Q ss_pred cCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 234 NADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 234 ~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
.+.++++ .+.+|.|++|+|..
T Consensus 198 -------~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 198 -------DASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp -------TBCHHHH-HSSCSEEEECCCCC
T ss_pred -------EEEhhHh-HhhCCEEEEecCCC
Confidence 1222333 25699999999986
No 267
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.07 E-value=3.6e-06 Score=82.57 Aligned_cols=101 Identities=13% Similarity=0.272 Sum_probs=69.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc---------ccC-HHHHHHHHHHH--HHcCcEEEcCCeEEE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------LFT-ADIAAFYEGYY--ANKGIKIIKGTVAVG 230 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~---------~~~-~~~~~~~~~~l--~~~gV~~~~~~~v~~ 230 (434)
.+||||||+|+.|+.+|..|.+.+.+|+++++.+.++-. .++ .++...+.+.+ ++.+++++.+ ++++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v~~ 120 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EATS 120 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EEEE
Confidence 358999999999999999999999999999998754210 011 11112233332 3457888765 6788
Q ss_pred EEecCCCcEEEEE------------------eCCCcEEEcCEEEEccCCccChh
Q 013890 231 FTTNADGEVNEVK------------------LKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~~~~v~------------------~~~g~~i~~d~vv~a~G~~p~~~ 266 (434)
|+. +.+...+. ..++.++++|.+|+|+|.+|+..
T Consensus 121 ID~--~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~ 172 (502)
T 4g6h_A 121 INP--DRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTF 172 (502)
T ss_dssp EEG--GGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCT
T ss_pred EEh--hhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccC
Confidence 876 33322322 13467899999999999988754
No 268
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.07 E-value=1.7e-05 Score=75.55 Aligned_cols=102 Identities=20% Similarity=0.285 Sum_probs=72.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc----cc---C---HHHH-----------------------
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----LF---T---ADIA----------------------- 208 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~----~~---~---~~~~----------------------- 208 (434)
...+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .+ + ....
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 3568999999999999999999999999999987543110 00 0 0000
Q ss_pred -----------------------HHHHHHHHH--cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCcc
Q 013890 209 -----------------------AFYEGYYAN--KGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 209 -----------------------~~~~~~l~~--~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p 263 (434)
..+.+.|.+ .+++++++++|++++.++++ ..+++.+|+++.+|+||.|.|...
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKK--WTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSS--EEEEETTSCCEEESEEEECSCTTC
T ss_pred CCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCE--EEEEECCCcEEecCEEEECCCcch
Confidence 011222222 13578899999999874433 468888998899999999999876
Q ss_pred Ch
Q 013890 264 LI 265 (434)
Q Consensus 264 ~~ 265 (434)
..
T Consensus 183 ~v 184 (398)
T 2xdo_A 183 KV 184 (398)
T ss_dssp SC
T ss_pred hH
Confidence 54
No 269
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.06 E-value=2.5e-05 Score=73.47 Aligned_cols=55 Identities=15% Similarity=0.160 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCcc
Q 013890 206 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 206 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p 263 (434)
.+.+.+.+.+++.|++++.+++|+++..++++ ..+.+.+| ++.+|.||+|+|...
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--VTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--EEEEECCC-eEEcCEEEEcCCccH
Confidence 34556667778889999999999999874333 46777777 599999999999643
No 270
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.06 E-value=9.7e-06 Score=79.01 Aligned_cols=98 Identities=18% Similarity=0.291 Sum_probs=71.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHH-H
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY-K 83 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 83 (434)
..+++|||+|+.|+-+|..|++.|.+ |+++++.+... +. ++. .......+.+ +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l---~~-------------~d~-------~~~~~l~~~l~~ 227 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAE---VTVVEFAPRCA---PT-------------LDE-------DVTNALVGALAK 227 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TT-------------SCH-------HHHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCE---EEEEecCCccc---cc-------------CCH-------HHHHHHHHHHhh
Confidence 46899999999999999999999876 99999985421 00 000 0012345667 8
Q ss_pred HCCcEEEcCCeEEEEeCCCC--EEEcC--CC--cEEEeceEEEccCCCccc
Q 013890 84 EKGIELILSTEIVRADIASK--TLLSA--TG--LIFKYQILVIATGSTVLR 128 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~--~v~~~--~~--~~~~~d~lilAtG~~~~~ 128 (434)
+.|++++.++.+..+..+.+ .+.+. ++ .++.+|.+|+|+|.+|..
T Consensus 228 ~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 228 NEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp HTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred cCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 89999999999999986553 34443 55 579999999999988864
No 271
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.06 E-value=1.8e-05 Score=78.78 Aligned_cols=100 Identities=23% Similarity=0.292 Sum_probs=77.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC-------------------------------------Cc----c
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------------------------------------PR----L 202 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~-------------------------------------~~----~ 202 (434)
..|+|||+|+.|+-+|..|++.|.+|+++++.+... .. .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999999999999753210 00 0
Q ss_pred ---------------c-CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEe--CCC-cEEEcCEEEEccCCcc
Q 013890 203 ---------------F-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKL--KDG-RTLEADIVVVGVGGRP 263 (434)
Q Consensus 203 ---------------~-~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~--~~g-~~i~~d~vv~a~G~~p 263 (434)
+ ...+.+.+.+.+++.|++++.+++|++++.++++. .|++ .+| +++.+|+||.|.|.+.
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v--~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAV--EVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCE--EEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeE--EEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 1 13466777888888899999999999998755553 3555 778 6899999999999876
Q ss_pred Ch
Q 013890 264 LI 265 (434)
Q Consensus 264 ~~ 265 (434)
..
T Consensus 208 ~v 209 (570)
T 3fmw_A 208 TV 209 (570)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 272
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.05 E-value=2e-05 Score=78.13 Aligned_cols=100 Identities=22% Similarity=0.235 Sum_probs=76.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC--------------------------------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------------------------------------------- 199 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~-------------------------------------------- 199 (434)
..|+|||+|+.|+-+|..|++.|.+|+++++.+...
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 479999999999999999999999999999764220
Q ss_pred -------C----c-----------------cc-CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCc--EEEEEeCCC-
Q 013890 200 -------P----R-----------------LF-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE--VNEVKLKDG- 247 (434)
Q Consensus 200 -------~----~-----------------~~-~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~--~~~v~~~~g- 247 (434)
. . .+ ...+.+.+.+.+++.|+++++++++++++.++++. ...+.+.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~ 165 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPD 165 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETT
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCC
Confidence 0 0 00 12456677888888899999999999998744411 234566665
Q ss_pred --cEEEcCEEEEccCCcc
Q 013890 248 --RTLEADIVVVGVGGRP 263 (434)
Q Consensus 248 --~~i~~d~vv~a~G~~p 263 (434)
.++.+|+||.|.|...
T Consensus 166 ~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 166 GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEEEEEEEEEEECCCTTC
T ss_pred CeEEEEeCEEEECCCCcc
Confidence 6899999999999754
No 273
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.05 E-value=2.8e-06 Score=86.37 Aligned_cols=35 Identities=29% Similarity=0.424 Sum_probs=32.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHH-----cCCCCCcEEEEeCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAK-----QGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~-----~g~~~~~V~vie~~~~ 42 (434)
.+||+||||||+|+++|..|++ .|++ |+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~---v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLK---VRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCC---EEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCC---EEEEeCCCC
Confidence 5899999999999999999999 8987 999999864
No 274
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.04 E-value=1.4e-05 Score=78.16 Aligned_cols=99 Identities=20% Similarity=0.277 Sum_probs=75.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+..|..+++.|.+ |+++++.+..... . . +.+ ...+.+.+++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtli~~~~~~l~~---~---------~---~~~--------~~~l~~~l~~ 244 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVK---TTLLHRGDLILRN---F---------D---YDL--------RQLLNDAMVA 244 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSSTT---S---------C---HHH--------HHHHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCe---EEEEECCCccccc---c---------C---HHH--------HHHHHHHHHH
Confidence 46899999999999999999998876 9999988542100 0 0 000 1234566777
Q ss_pred CCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..+..++. .+.+.+++++.+|.+|+|+|..|...
T Consensus 245 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 245 KGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTT 291 (484)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCT
T ss_pred CCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCC
Confidence 8999999999999987544 56777888999999999999887643
No 275
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.04 E-value=4.8e-05 Score=75.45 Aligned_cols=56 Identities=29% Similarity=0.479 Sum_probs=46.0
Q ss_pred HHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccCh
Q 013890 209 AFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 209 ~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
+.+.+.+++.||+++.+ +|+++..++++.+..|.+.+|+++.+|.||.|+|.....
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 45566667789999999 899998755666678888999889999999999986654
No 276
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=6.4e-06 Score=80.37 Aligned_cols=99 Identities=16% Similarity=0.319 Sum_probs=73.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+...- .. ...+ .....+.+++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtli~~~~~~l~---~~---------~~~~-----------~~~l~~~l~~ 230 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSE---VTVVEFASEIVP---TM---------DAEI-----------RKQFQRSLEK 230 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCE---EEEECSSSSSST---TS---------CHHH-----------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---EEEEEcCCcccc---cc---------cHHH-----------HHHHHHHHHH
Confidence 46899999999999999999999876 999999854210 00 0000 1234566778
Q ss_pred CCcEEEcCCeEEEEeCCCC--EEEcC---CC--cEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASK--TLLSA---TG--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~---~~--~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..++.+.+ .+.+. ++ .++.+|.+|+|+|.+|...
T Consensus 231 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 282 (470)
T 1dxl_A 231 QGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTS 282 (470)
T ss_dssp SSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCT
T ss_pred cCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCC
Confidence 9999999999999987653 34432 34 6799999999999988643
No 277
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.03 E-value=1e-05 Score=79.03 Aligned_cols=101 Identities=17% Similarity=0.212 Sum_probs=71.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEeeCCccCC-cc-c----------CHHHHHHHHHHH-HHcCcEEEcCCeE
Q 013890 164 GKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMP-RL-F----------TADIAAFYEGYY-ANKGIKIIKGTVA 228 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~--g~~v~~~~~~~~~~~-~~-~----------~~~~~~~~~~~l-~~~gV~~~~~~~v 228 (434)
.+++|||+|+.|+.+|..|++. |.+|+++++.+.+.. .. + ..++.....+.+ ++.||+++.++.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 5899999999999999999986 899999998765311 00 0 011111223445 3459999999999
Q ss_pred EEEEecCCCcEEEEEe-CCCc--EEEcCEEEEccCCccChh
Q 013890 229 VGFTTNADGEVNEVKL-KDGR--TLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 229 ~~i~~~~~g~~~~v~~-~~g~--~i~~d~vv~a~G~~p~~~ 266 (434)
..++. +.....+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 117 ~~i~~--~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (480)
T 3cgb_A 117 TKVDT--EKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMP 155 (480)
T ss_dssp EEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEC--CCCEEEEEEcCCCceEEEEcCEEEECCCCcccCC
Confidence 99976 333334443 4566 799999999999887643
No 278
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.02 E-value=2.1e-06 Score=83.75 Aligned_cols=41 Identities=29% Similarity=0.439 Sum_probs=34.8
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 220 IKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 220 V~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
++++++++|++|+.++++ ..|.+.+|+++.+|.||+|++..
T Consensus 248 ~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vi~a~p~~ 288 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSC--YSLELDNGVTLDADSVIVTAPHK 288 (470)
T ss_dssp EEEECSCCEEEEEECSSS--EEEEESSSCEEEESEEEECSCHH
T ss_pred CEEEeCCceEEEEEcCCe--EEEEECCCCEEECCEEEECCCHH
Confidence 799999999999874444 56888999889999999999853
No 279
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.02 E-value=3.3e-06 Score=81.93 Aligned_cols=41 Identities=24% Similarity=0.288 Sum_probs=35.8
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
|+++++||+|||||++||+||..|++.|++ |+|+|+++..+
T Consensus 1 m~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~---v~v~E~~~~~G 41 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSGLAAATALRKAGLS---VAVIEARDRVG 41 (453)
T ss_dssp -CEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCc---EEEEECCCCCC
Confidence 555678999999999999999999999987 99999987643
No 280
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.01 E-value=5.3e-06 Score=80.48 Aligned_cols=59 Identities=17% Similarity=0.093 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEecC-CCcEEEEEeCCCcEEEcCEEEEccCCccC
Q 013890 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNA-DGEVNEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 205 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~-~g~~~~v~~~~g~~i~~d~vv~a~G~~p~ 264 (434)
..+.+.+.+.+++.|++++++++|++|..+. ++++..|.+ +|+++.+|.||+|+|..+.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 4688888899999999999999999998732 566667776 4778999999999997654
No 281
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.00 E-value=3.8e-06 Score=82.87 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 205 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
..+.+.+.+.+++.|++++++++|++|.. ++. .+++.+|+++.+|.||+++...
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~--~~~--~v~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNA--NNK--TVTLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEET--TTT--EEEETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEc--cCC--EEEEcCCCEEECCEEEECCCHH
Confidence 45677777888889999999999999987 332 4678999999999999988743
No 282
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.99 E-value=6.4e-05 Score=73.98 Aligned_cols=57 Identities=16% Similarity=0.112 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCC-c--EEEcC-EEEEccCCc
Q 013890 206 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDG-R--TLEAD-IVVVGVGGR 262 (434)
Q Consensus 206 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g-~--~i~~d-~vv~a~G~~ 262 (434)
.+.+.+.+.+++.||+++++++++++..++++++.+|...++ + ++.+| .||+|+|--
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCCh
Confidence 455666777788999999999999998854688888876543 2 58896 999999943
No 283
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.99 E-value=1.9e-05 Score=77.44 Aligned_cols=98 Identities=12% Similarity=0.177 Sum_probs=70.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... +... . .+ .....+.+++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~d---------~---~~--------~~~l~~~l~~ 227 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVI---VKVFGRSGSVA---NLQD---------E---EM--------KRYAEKTFNE 227 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCE---EEEECCTTCCT---TCCC---------H---HH--------HHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEECCccc---ccCC---------H---HH--------HHHHHHHHhh
Confidence 46899999999999999999999876 99999986421 0000 0 00 1223445555
Q ss_pred CCcEEEcCCeEEEEeCCCC--EEEcC--CC--cEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASK--TLLSA--TG--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~--~~--~~~~~d~lilAtG~~~~~p 129 (434)
. ++++.++.+..+..+++ .+.+. +| .++.+|.+|+|+|..|...
T Consensus 228 ~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~ 277 (492)
T 3ic9_A 228 E-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVD 277 (492)
T ss_dssp T-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCS
T ss_pred C-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCC
Confidence 6 99999999999976554 34442 56 6799999999999988654
No 284
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.99 E-value=1.2e-05 Score=78.41 Aligned_cols=96 Identities=19% Similarity=0.272 Sum_probs=72.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+-+|..|++.|.+ |+++++.+... + .. ..+ .....+.+++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l---~-~~---------~~~-----------~~~l~~~l~~ 228 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSK---VTVLARNTLFF---R-ED---------PAI-----------GEAVTAAFRA 228 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCTTT---T-SC---------HHH-----------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCE---EEEEEECCccC---C-CC---------HHH-----------HHHHHHHHHh
Confidence 46899999999999999999999876 99999985421 0 00 000 1234567778
Q ss_pred CCcEEEcCCeEEEEeCCCCE--EEcCCCcEEEeceEEEccCCCccc
Q 013890 85 KGIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~lilAtG~~~~~ 128 (434)
.|++++.++.+.++..++.. +.+. +.++.+|.+|+|+|..|..
T Consensus 229 ~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 229 EGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp TTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred CCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 99999999999999765543 4444 5679999999999998764
No 285
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.98 E-value=1.4e-05 Score=77.66 Aligned_cols=98 Identities=21% Similarity=0.188 Sum_probs=74.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+..|..+++.|.+ |+++++.+... +.. . +.+ .....+.+++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vt~v~~~~~~l---~~~---------~---~~~--------~~~l~~~l~~ 223 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVK---TTLIYRGKEIL---SRF---------D---QDM--------RRGLHAAMEE 223 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TTS---------C---HHH--------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEcCCccc---ccc---------C---HHH--------HHHHHHHHHH
Confidence 46899999999999999999998876 99999885321 000 0 000 1234566788
Q ss_pred CCcEEEcCCeEEEEeCCC-C--EEE-cCCCcEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIAS-K--TLL-SATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~-~--~v~-~~~~~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..+..++ . .|. +.+++ +.+|.+|+|+|..|...
T Consensus 224 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 224 KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 999999999999998753 2 567 77777 99999999999887644
No 286
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.96 E-value=1.9e-05 Score=77.06 Aligned_cols=99 Identities=13% Similarity=0.214 Sum_probs=73.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+-+|..|++.|.+ |+++++.+..... ++. .......+.+++
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~~----------------~~~-------~~~~~l~~~l~~ 233 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAE---VTVLEAMDKFLPA----------------VDE-------QVAKEAQKILTK 233 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSSTT----------------SCH-------HHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---EEEEecCCCcCcc----------------cCH-------HHHHHHHHHHHh
Confidence 46899999999999999999999876 9999998642100 000 001234566778
Q ss_pred CCcEEEcCCeEEEEeCCCC--EEEcCCC---cEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASK--TLLSATG---LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~---~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..+..+++ .+.+.++ .++.+|.+|+|+|..|...
T Consensus 234 ~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 234 QGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp TTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCT
T ss_pred CCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCC
Confidence 8999999999999986554 3444443 5789999999999887653
No 287
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.96 E-value=1.3e-05 Score=77.98 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=71.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcc------------------------------cCH-H------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL------------------------------FTA-D------ 206 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~------------------------------~~~-~------ 206 (434)
..++|||+|+.|+.+|..|++.|.+|+++++.+.+...+ ++. .
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 369999999999999999999999999999766432110 010 0
Q ss_pred ----HH--HHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcE--EEcCEEEEccCCccChh
Q 013890 207 ----IA--AFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRT--LEADIVVVGVGGRPLIS 266 (434)
Q Consensus 207 ----~~--~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~--i~~d~vv~a~G~~p~~~ 266 (434)
+. ..+.+.+++.||+++.+ .+..++. + ...|.+.+|++ +.+|.+|+|+|.+|...
T Consensus 85 ~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~--~--~~~V~~~~g~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 85 YVQELRFKQHKRNMSQYETLTFYKG-YVKIKDP--T--HVIVKTDEGKEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEESE-EEEEEET--T--EEEEEETTSCEEEEEEEEEEECCCEEECCC
T ss_pred hheeccccchHHHHHHhCCCEEEEe-EEEEecC--C--eEEEEcCCCcEEEEecCEEEECCCCCccCC
Confidence 01 33444556779999887 5565543 2 35677888888 99999999999877643
No 288
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.94 E-value=1.5e-05 Score=78.13 Aligned_cols=99 Identities=16% Similarity=0.200 Sum_probs=72.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc----CCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHh
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQ----GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 80 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~----g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (434)
..+++|||||+.|+-+|..|++. |.+ |+++++.+... .+ .++.. ......+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~---V~~v~~~~~~~-~~--------------~l~~~-------~~~~~~~ 234 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTE---VIQLFPEKGNM-GK--------------ILPEY-------LSNWTME 234 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCE---EEEECSSSSTT-TT--------------TSCHH-------HHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCE---EEEEecCcccc-cc--------------cCCHH-------HHHHHHH
Confidence 36899999999999999999873 444 99998874310 00 01100 0123356
Q ss_pred HHHHCCcEEEcCCeEEEEeCCCC--EEEcCCCcEEEeceEEEccCCCccc
Q 013890 81 WYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 81 ~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lilAtG~~~~~ 128 (434)
.+++.|++++.++.+..++.+++ .+.+.+|+++.+|.+|+|+|..|..
T Consensus 235 ~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 235 KVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp HHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccH
Confidence 67788999999999999875443 4667788899999999999998764
No 289
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.92 E-value=9.4e-06 Score=77.32 Aligned_cols=38 Identities=16% Similarity=0.278 Sum_probs=34.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHc-CCCCCcEEEEeCCCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQ-GVKPGELAIISKEAVAP 44 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~~~~V~vie~~~~~~ 44 (434)
+++||+|||||++|++||..|++. |.+ |+|+|+++..+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~---v~v~E~~~~~G 44 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKR---VLVLERRPHIG 44 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCC---EEEECSSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCC---EEEEeCCCCCC
Confidence 468999999999999999999998 886 99999997643
No 290
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.92 E-value=1e-05 Score=77.79 Aligned_cols=54 Identities=22% Similarity=0.241 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 206 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 206 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
.+.+...+..+..+.+++++++|++|..+ ++.+ .|.+.+|+ +.+|.||+|++..
T Consensus 204 g~~~l~~~l~~~l~~~v~~~~~V~~i~~~-~~~v-~v~~~~g~-~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 204 GTQAMFEHLNATLEHPAERNVDITRITRE-DGKV-HIHTTDWD-RESDVLVLTVPLE 257 (424)
T ss_dssp CHHHHHHHHHHHSSSCCBCSCCEEEEECC-TTCE-EEEESSCE-EEESEEEECSCHH
T ss_pred hHHHHHHHHHHhhcceEEcCCEEEEEEEE-CCEE-EEEECCCe-EEcCEEEECCCHH
Confidence 34455555556667788999999999874 3444 48888885 8999999999853
No 291
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.91 E-value=6.3e-06 Score=81.40 Aligned_cols=38 Identities=18% Similarity=0.295 Sum_probs=34.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcC-CCCCcEEEEeCCCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKEAVAP 44 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g-~~~~~V~vie~~~~~~ 44 (434)
+.+||+|||||++||+||..|++.| .+ |+|+|+.+..+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~---V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQD---CLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCS---EEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCC---EEEEeCCCCCC
Confidence 4589999999999999999999999 76 99999997654
No 292
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.91 E-value=4.2e-05 Score=73.12 Aligned_cols=101 Identities=19% Similarity=0.205 Sum_probs=75.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCe-EEEEeeCCccCCcc---------------------------------------
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNID-VSMVYPEPWCMPRL--------------------------------------- 202 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~-v~~~~~~~~~~~~~--------------------------------------- 202 (434)
..+|+|||+|+.|+-+|..|++.|.+ |+++++.+.+.+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 35899999999999999999999999 99999865421100
Q ss_pred ---------------------cCHHHHHHHHHHHHH-cC-cEEEcCCeEEEEEecCCCcEEEEEeCC---C--cEEEcCE
Q 013890 203 ---------------------FTADIAAFYEGYYAN-KG-IKIIKGTVAVGFTTNADGEVNEVKLKD---G--RTLEADI 254 (434)
Q Consensus 203 ---------------------~~~~~~~~~~~~l~~-~g-V~~~~~~~v~~i~~~~~g~~~~v~~~~---g--~~i~~d~ 254 (434)
....+.+.+.+.+++ .| ++++++++|++++. +++ ..+.+.+ | +++.+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~--v~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG--RVLIGARDGHGKPQALGADV 160 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT--EEEEEEEETTSCEEEEEESE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc--cEEEEecCCCCCceEEecCE
Confidence 001345566666665 35 68999999999987 455 3455554 6 5799999
Q ss_pred EEEccCCccChh
Q 013890 255 VVVGVGGRPLIS 266 (434)
Q Consensus 255 vv~a~G~~p~~~ 266 (434)
||.|.|......
T Consensus 161 vV~AdG~~S~vR 172 (410)
T 3c96_A 161 LVGADGIHSAVR 172 (410)
T ss_dssp EEECCCTTCHHH
T ss_pred EEECCCccchhH
Confidence 999999877654
No 293
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.91 E-value=1.3e-05 Score=78.35 Aligned_cols=98 Identities=15% Similarity=0.112 Sum_probs=70.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+-+|..|++.|.+ |+++++....+.. ...+ .....+.+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~l~~~-------------d~~~-----------~~~l~~~l~~ 239 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYE---PTVMVRSIVLRGF-------------DQQM-----------AELVAASMEE 239 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSCSSTTS-------------CHHH-----------HHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCE---EEEEeCCCCCccc-------------CHHH-----------HHHHHHHHHh
Confidence 35799999999999999999999876 9999885321100 0000 1234566788
Q ss_pred CCcEEEcCCeEEEEeCCCC---EEEcCCCc-----EEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASK---TLLSATGL-----IFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~---~v~~~~~~-----~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..+....+ .+.+.++. ++.+|.+++|+|..|...
T Consensus 240 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 240 RGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCG
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcC
Confidence 9999999999999876332 35554432 789999999999887643
No 294
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.90 E-value=3.6e-05 Score=75.46 Aligned_cols=99 Identities=18% Similarity=0.269 Sum_probs=72.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+-+|..|++.|.+ |+++++.+..... ++. .......+.+++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~----------------~d~-------~~~~~l~~~l~~ 251 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAK---VTVVEFLDTILGG----------------MDG-------EVAKQLQRMLTK 251 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSSSSS----------------SCH-------HHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCE---EEEEecccccccc----------------CCH-------HHHHHHHHHHHh
Confidence 46899999999999999999999876 9999988642100 000 001234566778
Q ss_pred CCcEEEcCCeEEEEeCCCCE--EEcCC---C--cEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIASKT--LLSAT---G--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~---~--~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..+..+++. +.+.+ + .++.+|.+|+|+|.+|...
T Consensus 252 ~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~ 303 (491)
T 3urh_A 252 QGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTD 303 (491)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCT
T ss_pred CCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCC
Confidence 89999999999998765543 33332 4 5799999999999887653
No 295
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.90 E-value=8.7e-05 Score=72.76 Aligned_cols=102 Identities=23% Similarity=0.386 Sum_probs=78.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc----------------------------------------
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------------------------------------- 201 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~---------------------------------------- 201 (434)
...+|+|||+|+.|+-+|..|++.|.+|+++++.+.....
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 3567999999999999999999999999999875332100
Q ss_pred ------------cc-CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc---EEEcCEEEEccCCccCh
Q 013890 202 ------------LF-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGR---TLEADIVVVGVGGRPLI 265 (434)
Q Consensus 202 ------------~~-~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~---~i~~d~vv~a~G~~p~~ 265 (434)
.+ ...+.+.+.+.+++.|++++.++++++++.++++ ..+++.+++ ++.+|+||.|.|.+...
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v~v~~~~~~g~~~~~a~~vVgADG~~S~V 168 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH--VVVEVEGPDGPRSLTTRYVVGCDGGRSTV 168 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC--EEEEEECSSCEEEEEEEEEEECCCTTCHH
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE--EEEEEEcCCCcEEEEeCEEEEccCcccHH
Confidence 00 1346667777888889999999999999875444 346676664 79999999999987644
No 296
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.89 E-value=1.8e-05 Score=77.39 Aligned_cols=99 Identities=16% Similarity=0.152 Sum_probs=72.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+-+|..|++.|.+ |+++++.+...- .....+ .....+.+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~------------~~d~~~-----------~~~~~~~l~~ 240 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSK---TSLMIRHDKVLR------------SFDSMI-----------STNCTEELEN 240 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSCT------------TSCHHH-----------HHHHHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCe---EEEEEeCCcccc------------ccCHHH-----------HHHHHHHHHH
Confidence 36899999999999999999999876 999998754210 000000 1234566788
Q ss_pred CCcEEEcCCeEEEEeCCC-C---EEEcCC-------CcEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIAS-K---TLLSAT-------GLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~-~---~v~~~~-------~~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..+.... . .+.+.+ +.++.+|.+|+|+|..|...
T Consensus 241 ~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 241 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp TTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCT
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCC
Confidence 999999999999987543 2 344443 25789999999999887653
No 297
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.86 E-value=1.4e-05 Score=75.41 Aligned_cols=38 Identities=26% Similarity=0.568 Sum_probs=34.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
...+||+|||||++|+++|..|++.|.+ |+|+|+.+..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~---v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQR---VLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCc---eEEEeccCCC
Confidence 3468999999999999999999999887 9999998764
No 298
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.85 E-value=9.4e-05 Score=72.53 Aligned_cols=102 Identities=22% Similarity=0.333 Sum_probs=78.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc----------------------------------------
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------------------------------------- 201 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~---------------------------------------- 201 (434)
....|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 89 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPID 89 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecc
Confidence 3567999999999999999999999999999876432100
Q ss_pred ------------cc-CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc---EEEcCEEEEccCCccCh
Q 013890 202 ------------LF-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGR---TLEADIVVVGVGGRPLI 265 (434)
Q Consensus 202 ------------~~-~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~---~i~~d~vv~a~G~~p~~ 265 (434)
.+ ...+.+.+.+.+++.|++++.++++++++.++++ ..+++.++. ++.+|+||.|.|.+...
T Consensus 90 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v~v~~~~~~g~~~~~a~~vVgADG~~S~V 167 (500)
T 2qa1_A 90 FGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG--VTVEVRGPEGKHTLRAAYLVGCDGGRSSV 167 (500)
T ss_dssp GGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE--EEEEEEETTEEEEEEESEEEECCCTTCHH
T ss_pred cccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe--EEEEEEcCCCCEEEEeCEEEECCCcchHH
Confidence 00 1245667777888889999999999999874443 346666664 79999999999987644
No 299
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.85 E-value=8.9e-06 Score=79.47 Aligned_cols=56 Identities=23% Similarity=0.424 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 205 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
..+.+.+.+.+++.|++++++++|++|+.++++ ...|.+ ++.++.+|.||+|++..
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~-~~~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEG-RWKVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGGG-CEEEEC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc-eEEEEE-CCeEEEcCEEEECCCHH
Confidence 357788888899999999999999999874333 245665 45579999999999853
No 300
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.85 E-value=2.1e-05 Score=77.13 Aligned_cols=99 Identities=19% Similarity=0.285 Sum_probs=70.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcc---------c---CHHHHHHHHHHHHHcCcEEEcCCeEEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL---------F---TADIAAFYEGYYANKGIKIIKGTVAVGF 231 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~---------~---~~~~~~~~~~~l~~~gV~~~~~~~v~~i 231 (434)
.+++|||+|+.|+.+|..|++. .+|+++++.+.+.... + ..++...+.+.+ +.|++++.++.+.++
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 5799999999999999999999 9999999876542110 1 123333444444 669999999999888
Q ss_pred EecCCCcEEEEEeCCCc--EEEcCEEEEccCCccCh
Q 013890 232 TTNADGEVNEVKLKDGR--TLEADIVVVGVGGRPLI 265 (434)
Q Consensus 232 ~~~~~g~~~~v~~~~g~--~i~~d~vv~a~G~~p~~ 265 (434)
... +..+.....++++ ++.+|.+|+|+|..|..
T Consensus 187 ~~~-~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~ 221 (493)
T 1y56_A 187 FDK-GEYFLVPVVRGDKLIEILAKRVVLATGAIDST 221 (493)
T ss_dssp EEC-SSSEEEEEEETTEEEEEEESCEEECCCEEECC
T ss_pred EcC-CcEEEEEEecCCeEEEEECCEEEECCCCCccC
Confidence 763 3332222224454 68999999999987754
No 301
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.85 E-value=1.4e-05 Score=78.46 Aligned_cols=40 Identities=28% Similarity=0.415 Sum_probs=35.2
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013890 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
+++.+||+|||||++||+||..|++.|++ |+|+|+.+..+
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~---v~v~E~~~~~G 47 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYK---VTVLEARTRPG 47 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeccCCCC
Confidence 34568999999999999999999999886 99999997643
No 302
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.83 E-value=3.8e-05 Score=75.21 Aligned_cols=98 Identities=11% Similarity=0.115 Sum_probs=70.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+-+|..|++.|.+ |+++++....+. . ...+ .....+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~l~~----~---------d~~~-----------~~~l~~~l~~ 237 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLD---TTVMMRSIPLRG----F---------DQQM-----------SSLVTEHMES 237 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCSSTT----S---------CHHH-----------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---eEEEEcCccccc----C---------CHHH-----------HHHHHHHHHH
Confidence 35799999999999999999999876 999998632110 0 0000 1234566788
Q ss_pred CCcEEEcCCeEEEEeCC-CC--EEEcCC---Cc--EEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIA-SK--TLLSAT---GL--IFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~-~~--~v~~~~---~~--~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..+... +. .+.+.+ ++ ++.+|.+++|+|..|...
T Consensus 238 ~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 238 HGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp TTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCG
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccC
Confidence 99999999888888652 22 344433 44 478999999999887653
No 303
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.81 E-value=1.1e-05 Score=77.62 Aligned_cols=34 Identities=12% Similarity=0.179 Sum_probs=31.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
++||+|||||++|+++|+.|+++|++ |+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~---V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVD---VTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCE---EEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCe---EEEEcCCC
Confidence 47999999999999999999999987 99999986
No 304
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.81 E-value=1.7e-05 Score=74.29 Aligned_cols=38 Identities=16% Similarity=0.316 Sum_probs=33.9
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC-CCC
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-AVA 43 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~-~~~ 43 (434)
...+||+|||||++||+||+.|++.|++ |+|+|++ +..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~---V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHD---VTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCE---EEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCc---EEEEecccccc
Confidence 3468999999999999999999999986 9999998 653
No 305
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.79 E-value=7.3e-05 Score=79.17 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcc-------c----CHHHHHHHHHHHHHc-CcEEEcCCeEEE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL-------F----TADIAAFYEGYYANK-GIKIIKGTVAVG 230 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~-------~----~~~~~~~~~~~l~~~-gV~~~~~~~v~~ 230 (434)
..+++|||+|+.|+.+|..+++.|.+|+++++.+.+.... + ..++...+.+.+.+. +|+++.++.+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 3589999999999999999999999999999876542111 1 234445555666664 999999999988
Q ss_pred EEecCCCcEEEEEe---------------CCCcEEEcCEEEEccCCccCh
Q 013890 231 FTTNADGEVNEVKL---------------KDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 231 i~~~~~g~~~~v~~---------------~~g~~i~~d~vv~a~G~~p~~ 265 (434)
+.. ++.+..+.. .++.++.+|.+|+|||.+|..
T Consensus 208 i~~--~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~ 255 (965)
T 2gag_A 208 SYD--ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP 255 (965)
T ss_dssp EET--TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC
T ss_pred eec--CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC
Confidence 864 332222211 112368999999999987754
No 306
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.79 E-value=2.1e-05 Score=76.81 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=33.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcC-CCCCcEEEEeCCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g-~~~~~V~vie~~~~~ 43 (434)
+.+||+|||||++|+++|..|++.| .+ |+|+|+++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~---v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKN---WHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCS---EEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCC---EEEEeCCCCC
Confidence 4689999999999999999999998 45 9999999764
No 307
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.78 E-value=4.4e-05 Score=72.86 Aligned_cols=54 Identities=17% Similarity=0.217 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEE---------EEEecCCCcEEEEEeCCCcEEEcCEEEEccCCcc
Q 013890 207 IAAFYEGYYANKGIKIIKGTVAV---------GFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 207 ~~~~~~~~l~~~gV~~~~~~~v~---------~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p 263 (434)
+.+.+.+.+++.|++++.+++|+ ++..+ ++.+ .|.+.+| ++.+|.||+|+|...
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccH
Confidence 55667777888999999999998 77652 3344 6666666 799999999999764
No 308
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.77 E-value=7.8e-06 Score=79.31 Aligned_cols=91 Identities=13% Similarity=0.120 Sum_probs=69.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CeEEEEeeCCccC--------Ccc-cCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCM--------PRL-FTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g--~~v~~~~~~~~~~--------~~~-~~~~~~~~~~~~l~~~gV~~~~~~~v~~ 230 (434)
.+++++|||+|+.|+.+|..|.+.| .+|+++++.+.+. +.. ...++...+.+.+++.||+++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3679999999999999999999998 9999999887654 211 123566777788889999999987652
Q ss_pred EEecCCCcEEEEEeCCCcEEEcCEEEEccCCcc
Q 013890 231 FTTNADGEVNEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 231 i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p 263 (434)
. .|.+.+. ++.+|.||+|||..|
T Consensus 84 ------~---~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 ------R---DVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp ------T---TBCHHHH-HHHSSEEEECCCCCE
T ss_pred ------e---EEEeccc-eEEcCEEEEecCcCC
Confidence 1 1333332 468999999999875
No 309
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.73 E-value=0.00024 Score=69.72 Aligned_cols=56 Identities=16% Similarity=0.124 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCc--EEEcCEEEEccCCccC
Q 013890 207 IAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKL---KDGR--TLEADIVVVGVGGRPL 264 (434)
Q Consensus 207 ~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~---~~g~--~i~~d~vv~a~G~~p~ 264 (434)
+...+.+.+++.|++++.+++|+++..+ +.+..|.+ .+|+ ++.+|.||.|+|....
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~--~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARRE--NGLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEE--TTEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEe--CCEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 4556677778899999999999999873 35566776 3565 7899999999997643
No 310
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.73 E-value=1.3e-05 Score=85.43 Aligned_cols=94 Identities=18% Similarity=0.279 Sum_probs=71.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCccCC-------c-ccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEe
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPWCMP-------R-LFTADIAAFYEGYYANKGIKIIKGTVAVGFTT 233 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~-~v~~~~~~~~~~~-------~-~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~ 233 (434)
+++++|||+|+.|+.+|..|++.|. +|+++++.+.+.. . .++.+..+...+.+++.||+++.++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 4689999999999999999999999 7999998765421 1 13556677777888999999999987631
Q ss_pred cCCCcEEEEEeCCCcEEEcCEEEEccCC-ccCh
Q 013890 234 NADGEVNEVKLKDGRTLEADIVVVGVGG-RPLI 265 (434)
Q Consensus 234 ~~~g~~~~v~~~~g~~i~~d~vv~a~G~-~p~~ 265 (434)
. .+.+++++++.+|.||+|||. +|..
T Consensus 264 ---~---~v~~~~~~~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 ---N---EITLNTLKEEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp ---T---SBCHHHHHHTTCCEEEECCCCCEECC
T ss_pred ---c---eEEhhhcCccCCCEEEEecCCCCCCC
Confidence 1 133444555789999999998 4653
No 311
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.72 E-value=2.2e-05 Score=77.30 Aligned_cols=38 Identities=24% Similarity=0.372 Sum_probs=33.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
+.+||+|||||++||+||..|++.|++ |+|+|+.+..+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~---v~v~E~~~~~G 49 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLN---VTVFEAEGKAG 49 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCE---EEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCc---EEEEEeCCCCC
Confidence 458999999999999999999999886 99999997643
No 312
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.71 E-value=9.2e-05 Score=73.01 Aligned_cols=98 Identities=15% Similarity=0.221 Sum_probs=67.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+-+|..|++.|.+ |+++++....+. + ...+ .....+.+++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~---Vtlv~~~~~l~~---------~----d~~~-----------~~~~~~~l~~ 262 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLD---VTVMVRSILLRG---------F----DQDM-----------ANKIGEHMEE 262 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCSSTT---------S----CHHH-----------HHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCe---EEEEeccccccc---------C----CHHH-----------HHHHHHHHHH
Confidence 35799999999999999999999876 999998532110 0 0000 1234566778
Q ss_pred CCcEEEcCCeEEEEeCCC----CE--EE--cCCC---cEEEeceEEEccCCCcccc
Q 013890 85 KGIELILSTEIVRADIAS----KT--LL--SATG---LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~----~~--v~--~~~~---~~~~~d~lilAtG~~~~~p 129 (434)
.|++++.++.+..+.... .. +. ..++ .++.+|.+++|+|.+|...
T Consensus 263 ~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~ 318 (519)
T 3qfa_A 263 HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTR 318 (519)
T ss_dssp TTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCS
T ss_pred CCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCC
Confidence 999999997766664321 22 22 2344 2568999999999888643
No 313
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.70 E-value=1.9e-05 Score=78.84 Aligned_cols=58 Identities=21% Similarity=0.245 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeC---CCc--EEEcCEEEEccCCc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLK---DGR--TLEADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~---~g~--~i~~d~vv~a~G~~ 262 (434)
+..+...+.+.+++.|++++.+++|+++.. +++.+.+|.+. +|+ ++.+|.||+|+|..
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~-~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLY-EGDQIVGVKARDLLTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEBSCEEECCGGG
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEE-eCCEEEEEEEEEcCCCCEEEEEcCEEEECCChh
Confidence 566777778888999999999999999987 34566667653 343 69999999999954
No 314
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.69 E-value=2.6e-05 Score=76.09 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=32.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcC--CCCCcEEEEeCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQG--VKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g--~~~~~V~vie~~~~~ 43 (434)
++||+|||||++|+++|++|++.| .+ |+|+|+++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~---v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLN---ITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSE---EEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCC---EEEEECCCCC
Confidence 589999999999999999999998 55 9999998654
No 315
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.68 E-value=4.3e-05 Score=73.58 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccC
Q 013890 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 205 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~ 264 (434)
..+.+.+.+.+++.|++++++++|++|.. .++.+..|. .+|+++.+|.||+|+|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~-~~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEE-ETTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEE-eCCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 47788888889999999999999999986 356665565 47788999999999998764
No 316
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.66 E-value=8.7e-06 Score=78.86 Aligned_cols=89 Identities=18% Similarity=0.146 Sum_probs=68.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-C------CCeEEEEeeCCccCCc---------ccCHHHHHHHHHHHHHcCcEEEcCC
Q 013890 163 NGKAVVVGGGYIGLELSAALKI-N------NIDVSMVYPEPWCMPR---------LFTADIAAFYEGYYANKGIKIIKGT 226 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~-~------g~~v~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~gV~~~~~~ 226 (434)
+++++|||+|+.|+.+|..|.+ . +.+|+++++.+.+... ....++...+.+.+++.||+++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 5689999999999999999999 7 9999999988654321 1234566777788888999999885
Q ss_pred eEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 227 VAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 227 ~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
.+ +. .|.++++ ++.+|.||+|||..
T Consensus 83 ~v-------~~---~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV-------GE---HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB-------TT---TBCHHHH-HHHSSEEEECCCCC
T ss_pred EE-------CC---EEEECCC-eEeCCEEEEeeCCC
Confidence 43 11 1344445 47899999999986
No 317
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.65 E-value=0.00029 Score=68.55 Aligned_cols=99 Identities=21% Similarity=0.301 Sum_probs=71.4
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCC-------------c------------------------------
Q 013890 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP-------------R------------------------------ 201 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~-------------~------------------------------ 201 (434)
.++|||+|..|+-+|..+++.|.+|+++++...-.. .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 379999999999999999999999999987610000 0
Q ss_pred -----------------------------------ccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeC-
Q 013890 202 -----------------------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLK- 245 (434)
Q Consensus 202 -----------------------------------~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~- 245 (434)
.....+.+.+.+.+++.||+++.++.+ ++.. +++.+.++...
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~-~~~~v~Gv~v~~ 158 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRV-KDGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEE-ETTEEEEEEETT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEE-eCCEEEEEEEEe
Confidence 001134455666667789999999999 9876 35666666553
Q ss_pred CCcEEEcCEEEEccCCccCh
Q 013890 246 DGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 246 ~g~~i~~d~vv~a~G~~p~~ 265 (434)
++.++.+|.||+|+|..+..
T Consensus 159 ~~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 159 RGLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp TEEECCCSEEEECCCCCGGG
T ss_pred CCCeEEeeeEEECCCCCccc
Confidence 23357899999999976643
No 318
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.65 E-value=5.9e-05 Score=76.89 Aligned_cols=87 Identities=16% Similarity=0.233 Sum_probs=66.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcc-----cC-----HHHHHHHHHHHHHcCcEEEcCCeEEEEE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL-----FT-----ADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~-----~~-----~~~~~~~~~~l~~~gV~~~~~~~v~~i~ 232 (434)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+.... ++ .++...+.+.+++.||+++.++.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA-- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS--
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH--
Confidence 4689999999999999999999999999999876542210 11 23455667778889999998876432
Q ss_pred ecCCCcEEEEEeCCCcEE-EcCEEEEccCCccChh
Q 013890 233 TNADGEVNEVKLKDGRTL-EADIVVVGVGGRPLIS 266 (434)
Q Consensus 233 ~~~~g~~~~v~~~~g~~i-~~d~vv~a~G~~p~~~ 266 (434)
. .+ .+|.+|+|||.+|...
T Consensus 451 ---~------------~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 451 ---D------------QLQAFDETILASGIVPRTP 470 (671)
T ss_dssp ---S------------SSCCSSEEEECCCEEECCC
T ss_pred ---H------------HhhcCCEEEEccCCCcCCC
Confidence 0 13 7999999999887653
No 319
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.63 E-value=3.6e-05 Score=72.83 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVA 43 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~ 43 (434)
+||+|||||++|+++|..|+++ |++ |+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~---V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWA---IDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSE---EEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCC---EEEEECCCCC
Confidence 3899999999999999999998 876 9999998654
No 320
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.62 E-value=3.9e-05 Score=74.87 Aligned_cols=37 Identities=19% Similarity=0.394 Sum_probs=32.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
..+||+|||||++|++||..|++.|++ |+|+|+++..
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~---v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTD---AVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCC---EEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCC---EEEEEcCCCC
Confidence 468999999999999999999999987 9999999764
No 321
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.61 E-value=3.1e-05 Score=72.32 Aligned_cols=46 Identities=15% Similarity=0.238 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCcc
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p 263 (434)
+..+...+.+.+++.|++++. ++|++++.. + .+.+|.||+|+|...
T Consensus 141 p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~--~-----------~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 141 GKNYLQWLTERLTERGVKFFQ-RKVESFEEV--A-----------REGADVIVNCTGVWA 186 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH--H-----------HTTCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh--h-----------cCCCCEEEECCCcCh
Confidence 567888888999999999998 787776431 1 257999999999644
No 322
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.60 E-value=7.8e-05 Score=76.21 Aligned_cols=97 Identities=14% Similarity=0.110 Sum_probs=71.8
Q ss_pred CcEEEEC--CCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 6 FKYVILG--GGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 6 ~dvvIIG--~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
.+|+||| +|..|+.+|..|++.|.+ |+++++.+...-. .. . +. ....+.+.++
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~---Vtlv~~~~~l~~~-------~~----~---~~--------~~~~l~~~l~ 578 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYE---VSIVTPGAQVSSW-------TN----N---TF--------EVNRIQRRLI 578 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCE---EEEEESSSSTTGG-------GG----G---GT--------CHHHHHHHHH
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCe---eEEEecccccccc-------cc----c---ch--------hHHHHHHHHH
Confidence 5699999 999999999999999876 9999987542100 00 0 00 0123456778
Q ss_pred HCCcEEEcCCeEEEEeCCCCEEEc---CCCcEEEeceEEEccCCCcc
Q 013890 84 EKGIELILSTEIVRADIASKTLLS---ATGLIFKYQILVIATGSTVL 127 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~---~~~~~~~~d~lilAtG~~~~ 127 (434)
+.|++++.++.+..++.+...+.. .+++++.+|.+|+|+|..|.
T Consensus 579 ~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 579 ENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp HTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred HCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 899999999999999876555542 24567999999999998875
No 323
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.60 E-value=6e-05 Score=69.97 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
+||+|||||+||+.||..|++.|.+ |+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~---V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVP---VRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCc---EEEEeccCC
Confidence 6999999999999999999999987 999999863
No 324
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.60 E-value=0.00015 Score=72.99 Aligned_cols=97 Identities=12% Similarity=0.179 Sum_probs=66.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||..|+-+|..|++.|.+ |+++++....+. . ...+ .....+.+++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~l~~----~---------d~~~-----------~~~~~~~l~~ 338 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGD---VTVMVRSILLRG----F---------DQQM-----------AEKVGDYMEN 338 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCSSTT----S---------CHHH-----------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCE---EEEEECCcCcCc----C---------CHHH-----------HHHHHHHHHh
Confidence 35799999999999999999999876 999998721110 0 0000 1233456778
Q ss_pred CCcEEEcCCeEEEEeC------CC---CEE--E--cCCCcEEE--eceEEEccCCCccc
Q 013890 85 KGIELILSTEIVRADI------AS---KTL--L--SATGLIFK--YQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~------~~---~~v--~--~~~~~~~~--~d~lilAtG~~~~~ 128 (434)
.|++++.++.+..+.. +. ..+ . ..+++++. +|.+++|+|.+|..
T Consensus 339 ~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 339 HGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQL 397 (598)
T ss_dssp TTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECG
T ss_pred CCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCcccc
Confidence 8999999977766632 11 322 2 24665554 99999999988864
No 325
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.59 E-value=5.1e-05 Score=71.74 Aligned_cols=37 Identities=30% Similarity=0.459 Sum_probs=33.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
++||+|||||++|+++|..|++.|.+ |+|+|+++..+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~---v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQ---VHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCc---EEEEEecCCcC
Confidence 47999999999999999999998876 99999987643
No 326
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.58 E-value=4.9e-05 Score=71.42 Aligned_cols=35 Identities=29% Similarity=0.525 Sum_probs=32.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
+|++|||||++|+++|..|++.|.+ |+|+|+++..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~---v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKK---VLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCC---EEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc---EEEEecCCCC
Confidence 6999999999999999999999887 9999998754
No 327
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.56 E-value=5.8e-05 Score=74.11 Aligned_cols=37 Identities=22% Similarity=0.309 Sum_probs=33.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
..+||+|||||++|++||..|++.|.+ |+|+|+.+..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~---v~vlE~~~~~ 68 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQ---VTVLEASERP 68 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCE---EEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCC
Confidence 468999999999999999999999986 9999998754
No 328
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.55 E-value=5.3e-05 Score=74.33 Aligned_cols=56 Identities=21% Similarity=0.236 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHcC-cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 205 ADIAAFYEGYYANKG-IKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 205 ~~~~~~~~~~l~~~g-V~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
..+.+.+.+.+++.| ++++++++|++|+..+++ ..|.+.+|+++.+|.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA--ARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS--EEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEECCCHH
Confidence 467788888888888 999999999999874433 46888888889999999999953
No 329
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.45 E-value=8e-05 Score=76.56 Aligned_cols=88 Identities=17% Similarity=0.128 Sum_probs=59.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcc--------c--CHHHHHHHHHHHHHc------CcEEEcCC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL--------F--TADIAAFYEGYYANK------GIKIIKGT 226 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~--------~--~~~~~~~~~~~l~~~------gV~~~~~~ 226 (434)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+...+ + -..+.+.+.+.++.. ++++..+.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~~~ 468 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALGQK 468 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECSCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEeCe
Confidence 4689999999999999999999999999999876543211 0 022333333333332 45554332
Q ss_pred eEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccC
Q 013890 227 VAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 227 ~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~ 264 (434)
. +.++++.++.+|.||+|||..|.
T Consensus 469 ~--------------v~~~~~~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 469 P--------------MTADDVLQYGADKVIIATGARWN 492 (729)
T ss_dssp C--------------CCHHHHHTSCCSEEEECCCEEEC
T ss_pred E--------------EehhhccccCCCEEEEcCCCCcc
Confidence 1 23334456789999999998854
No 330
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.41 E-value=0.0001 Score=74.49 Aligned_cols=35 Identities=43% Similarity=0.582 Sum_probs=31.8
Q ss_pred cCcEEEECCCHHHHHHHHHHH---H-cCCCCCcEEEEeCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFA---K-QGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~---~-~g~~~~~V~vie~~~~ 42 (434)
.+||||||||+||++||+.|+ + .|.+ |+||||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~---V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLK---VTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCC---EEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCe---EEEEeCcCC
Confidence 489999999999999999999 5 7887 999999874
No 331
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.40 E-value=0.00083 Score=67.29 Aligned_cols=97 Identities=19% Similarity=0.216 Sum_probs=71.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC--CeEEEEeeCCccCC------------------------------c-cc-------
Q 013890 164 GKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCMP------------------------------R-LF------- 203 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g--~~v~~~~~~~~~~~------------------------------~-~~------- 203 (434)
-.|+|||+|..|+-+|..|++.| .+|.++++.+.... . ..
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~ 85 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDY 85 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Confidence 37999999999999999999999 99999987632100 0 00
Q ss_pred -----------------------------------------------CHHHHHHHHHHHHHcC-cEEEcCCeEEEEEecC
Q 013890 204 -----------------------------------------------TADIAAFYEGYYANKG-IKIIKGTVAVGFTTNA 235 (434)
Q Consensus 204 -----------------------------------------------~~~~~~~~~~~l~~~g-V~~~~~~~v~~i~~~~ 235 (434)
...+...+.+.+++.| |+++.++.+.++.. +
T Consensus 86 ~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~-~ 164 (602)
T 1kf6_A 86 FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV-D 164 (602)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE-E
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE-e
Confidence 0123344555556678 99999999999986 3
Q ss_pred CCcEEEEEe---CCCc--EEEcCEEEEccCC
Q 013890 236 DGEVNEVKL---KDGR--TLEADIVVVGVGG 261 (434)
Q Consensus 236 ~g~~~~v~~---~~g~--~i~~d~vv~a~G~ 261 (434)
++++.++.. .+|+ .+.++.||+|+|.
T Consensus 165 ~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 165 DGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp TTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred CCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 566656543 5676 6899999999995
No 332
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.36 E-value=0.00012 Score=69.18 Aligned_cols=87 Identities=18% Similarity=0.162 Sum_probs=68.2
Q ss_pred cEEEECCCHHHHHHHHHHHHC--CCeEEEEeeCCcc----------------------C-Cc------------------
Q 013890 165 KAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWC----------------------M-PR------------------ 201 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~--g~~v~~~~~~~~~----------------------~-~~------------------ 201 (434)
+|+|||+|+.|+.+|..|++. |.+|+++++.+.+ . ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 689999999999999999999 9999999986543 0 00
Q ss_pred -------------ccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCccC
Q 013890 202 -------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 202 -------------~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~p~ 264 (434)
....++.+.+.+.+++.|++++++++|++++. . +++.+|+||.|.|....
T Consensus 82 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-----------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 82 EPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--L-----------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--C-----------CGGGCSEEEECCGGGGG
T ss_pred eeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--c-----------ccccCCEEEECCCCCch
Confidence 01145677888888888999999999888753 1 12579999999997654
No 333
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.36 E-value=0.00085 Score=67.86 Aligned_cols=100 Identities=23% Similarity=0.244 Sum_probs=74.0
Q ss_pred CcEEEECCCHHHHHHHHHHHH-CCCeEEEEeeCCccCC------------------------------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKI-NNIDVSMVYPEPWCMP------------------------------------------ 200 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~-~g~~v~~~~~~~~~~~------------------------------------------ 200 (434)
..|+|||+|+.|+-+|..|++ .|.+|+++++.+....
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 369999999999999999999 9999999987532100
Q ss_pred --c---------------------ccC-HHHHHHHHHHHHHcCc--EEEcCCeEEEEEecCC--CcEEEEEeC------C
Q 013890 201 --R---------------------LFT-ADIAAFYEGYYANKGI--KIIKGTVAVGFTTNAD--GEVNEVKLK------D 246 (434)
Q Consensus 201 --~---------------------~~~-~~~~~~~~~~l~~~gV--~~~~~~~v~~i~~~~~--g~~~~v~~~------~ 246 (434)
. .++ ..+.+.+.+.+++.|+ +++.++++++++.+++ +....+++. +
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 0 001 2456677788888877 9999999999987442 222345543 4
Q ss_pred C--cEEEcCEEEEccCCcc
Q 013890 247 G--RTLEADIVVVGVGGRP 263 (434)
Q Consensus 247 g--~~i~~d~vv~a~G~~p 263 (434)
| +++.+|+||.|.|.+.
T Consensus 193 G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGARS 211 (639)
T ss_dssp TCEEEEEEEEEEECCCTTC
T ss_pred CCeEEEEeCEEEECCCcch
Confidence 6 4789999999999754
No 334
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.29 E-value=0.0002 Score=69.69 Aligned_cols=54 Identities=20% Similarity=0.286 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHc--------CcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCC
Q 013890 206 DIAAFYEGYYANK--------GIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGG 261 (434)
Q Consensus 206 ~~~~~~~~~l~~~--------gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~ 261 (434)
.+.+.+.+.+.+. |++++++++|++|..++++ ..|.+.+|+++.+|.||+|++.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG--VTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC--EEEEETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc--EEEEECCCCEEEcCEEEEecCH
Confidence 4445555555443 6889999999999874444 3588899989999999999884
No 335
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.28 E-value=0.0016 Score=64.86 Aligned_cols=34 Identities=15% Similarity=0.347 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~ 196 (434)
...++|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4589999999999999999999999999998764
No 336
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.24 E-value=0.0015 Score=64.89 Aligned_cols=97 Identities=18% Similarity=0.263 Sum_probs=69.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc------------------------------------------
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------------------------------------------ 201 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~------------------------------------------ 201 (434)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.....
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 37999999999999999999999999999876432100
Q ss_pred ---c------------------------cC-HHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCC---C--c
Q 013890 202 ---L------------------------FT-ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKD---G--R 248 (434)
Q Consensus 202 ---~------------------------~~-~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~---g--~ 248 (434)
. ++ ..+.+.+.+.+++. +++++++++++.++++ + .+++.+ | +
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v-~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH-V-RATITDLRTGATR 181 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC-E-EEEEEETTTCCEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE-E-EEEEEECCCCCEE
Confidence 0 00 13444555555555 8889999999875444 2 355543 6 4
Q ss_pred EEEcCEEEEccCCccCh
Q 013890 249 TLEADIVVVGVGGRPLI 265 (434)
Q Consensus 249 ~i~~d~vv~a~G~~p~~ 265 (434)
++.+|+||.|.|.+...
T Consensus 182 ~i~a~~vVgADG~~S~v 198 (549)
T 2r0c_A 182 AVHARYLVACDGASSPT 198 (549)
T ss_dssp EEEEEEEEECCCTTCHH
T ss_pred EEEeCEEEECCCCCcHH
Confidence 79999999999976543
No 337
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.23 E-value=0.00012 Score=72.28 Aligned_cols=35 Identities=29% Similarity=0.557 Sum_probs=32.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..||+||||||.||+.+|.+|++ +.+ |+|+|+.+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~---VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYK---VLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSC---EEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCc---EEEEecCCC
Confidence 45899999999999999999999 876 999999864
No 338
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.22 E-value=0.00026 Score=70.33 Aligned_cols=58 Identities=10% Similarity=0.194 Sum_probs=42.8
Q ss_pred HHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCC---Cc--EE---EcCEEEEccCCccChhhh
Q 013890 210 FYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKD---GR--TL---EADIVVVGVGGRPLISLF 268 (434)
Q Consensus 210 ~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~---g~--~i---~~d~vv~a~G~~p~~~~~ 268 (434)
.+....++.|++++.++.|+++.. +++++.+|.+.+ |+ ++ .++.||+|+|.-....++
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~-~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL 266 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVR-NGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRIL 266 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEE-ETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEE-eCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHH
Confidence 344444456999999999999987 356788888865 53 34 789999999976555544
No 339
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.17 E-value=0.00029 Score=72.52 Aligned_cols=42 Identities=24% Similarity=0.230 Sum_probs=35.4
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCC
Q 013890 218 KGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGG 261 (434)
Q Consensus 218 ~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~ 261 (434)
.|+++++++.|++|+.++++ ..|.+.+|+++.+|.||+|++.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~--v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDE--VQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSS--EEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCE--EEEEECCCcEEEcCEEEECCCH
Confidence 47899999999999874444 4688899989999999999963
No 340
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.11 E-value=0.00027 Score=69.80 Aligned_cols=52 Identities=17% Similarity=0.272 Sum_probs=37.8
Q ss_pred HHcCcEEEcCCeEEEEEecCCCcEEEEEeCCC---cEEEcCEEEEccCCccChhhh
Q 013890 216 ANKGIKIIKGTVAVGFTTNADGEVNEVKLKDG---RTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 216 ~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g---~~i~~d~vv~a~G~~p~~~~~ 268 (434)
.+.++++..++.+.++.. +++++.+|...+. ..+.++.||+|.|.--...++
T Consensus 222 ~r~nl~v~~~~~v~~i~~-~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LL 276 (526)
T 3t37_A 222 GRKNLTILTGSRVRRLKL-EGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALL 276 (526)
T ss_dssp TCTTEEEECSCEEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCCCeEEEeCCEEEEEEe-cCCeEEEEEEEecCceEEEeecceEEcccccCCcchh
Confidence 456899999999999987 4566666665432 357789999999965444544
No 341
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.07 E-value=0.0037 Score=62.68 Aligned_cols=49 Identities=22% Similarity=0.301 Sum_probs=37.1
Q ss_pred HHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCc--EEEcCEEEEccCC
Q 013890 212 EGYYANKGIKIIKGTVAVGFTTNADGEVNEVKL---KDGR--TLEADIVVVGVGG 261 (434)
Q Consensus 212 ~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~---~~g~--~i~~d~vv~a~G~ 261 (434)
.+.+++.||+++.++.+.++.. +++++.+|.. .+|+ .+.++.||+|+|-
T Consensus 162 ~~~~~~~gv~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 162 YGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHTTSCCEEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHhCCCEEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 3334456899999999999976 3677767665 4665 6889999999995
No 342
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.06 E-value=0.00043 Score=70.30 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=33.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
.+||+|||||++|+++|..|++.|++ |+|+|+.+..
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~---v~~~e~~~~~ 142 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMD---VTLLEARDRV 142 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCE---EEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCe---EEEEecCCCC
Confidence 57999999999999999999999987 9999998764
No 343
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.06 E-value=0.00035 Score=69.42 Aligned_cols=53 Identities=19% Similarity=0.203 Sum_probs=38.3
Q ss_pred HHcCcEEEcCCeEEEEEecC-CCcEEEEEeC--CCc--EEEc-CEEEEccCCccChhhh
Q 013890 216 ANKGIKIIKGTVAVGFTTNA-DGEVNEVKLK--DGR--TLEA-DIVVVGVGGRPLISLF 268 (434)
Q Consensus 216 ~~~gV~~~~~~~v~~i~~~~-~g~~~~v~~~--~g~--~i~~-d~vv~a~G~~p~~~~~ 268 (434)
.+.|+++++++.|+++..++ ++++++|++. +|+ ++.+ .-||+|+|.--...++
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL 275 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLL 275 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHH
Confidence 45789999999999998743 5678888774 364 4566 5699999955444433
No 344
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.04 E-value=0.00052 Score=71.14 Aligned_cols=37 Identities=27% Similarity=0.407 Sum_probs=33.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
.+||+|||||++||+||..|+++|++ |+|+|+.+..+
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~---v~v~E~~~~~G 314 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMD---VTLLEARDRVG 314 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCc---EEEEEecCcCC
Confidence 57999999999999999999999987 99999987643
No 345
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.96 E-value=0.0072 Score=61.04 Aligned_cols=50 Identities=18% Similarity=0.274 Sum_probs=37.9
Q ss_pred HHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCc--EEEcCEEEEccCC
Q 013890 211 YEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKL---KDGR--TLEADIVVVGVGG 261 (434)
Q Consensus 211 ~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~---~~g~--~i~~d~vv~a~G~ 261 (434)
+.+.+++.||+++.++.+.++.. +++++.++.. .+|+ .+.++.||+|+|-
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 34445567899999999999976 4576666654 4675 4899999999994
No 346
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.93 E-value=0.00059 Score=67.60 Aligned_cols=57 Identities=23% Similarity=0.291 Sum_probs=41.1
Q ss_pred HHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEeCC---Cc--EEEcC-EEEEccCCccChhh
Q 013890 211 YEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKLKD---GR--TLEAD-IVVVGVGGRPLISL 267 (434)
Q Consensus 211 ~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~~~---g~--~i~~d-~vv~a~G~~p~~~~ 267 (434)
+....++.|++++.++.|+++..++++++.+|.+.+ |+ ++.++ .||+|+|.--...+
T Consensus 215 l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~l 277 (546)
T 2jbv_A 215 IHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKL 277 (546)
T ss_dssp TGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHH
T ss_pred HHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchh
Confidence 333334679999999999999874337788887744 53 68898 99999996433333
No 347
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.93 E-value=0.0064 Score=62.56 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
.+++|||+|..|+-+|..|.+.|.+|+++++.+.+
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRI 371 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEecccce
Confidence 58999999999999999999999999999986543
No 348
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.89 E-value=0.00085 Score=65.83 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=33.2
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
+..+|++|||+|++|+.+|..|++.+.+ |+|||+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~---v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIP---TQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCc---EEEEECCCC
Confidence 3469999999999999999999998877 999999864
No 349
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.89 E-value=0.0057 Score=59.12 Aligned_cols=36 Identities=22% Similarity=0.494 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC------CeEEEEeeCCcc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINN------IDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g------~~v~~~~~~~~~ 198 (434)
.++|+|||+|.+|+-+|..|.+.| .+|+++++.+++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 358999999999999999999999 999999987654
No 350
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.88 E-value=0.00061 Score=67.69 Aligned_cols=59 Identities=12% Similarity=0.214 Sum_probs=42.3
Q ss_pred HHHHHHHHcCcEEEcCCeEEEEEecC---CCcEEEEEeC--CCc--EEEcC-EEEEccCCccChhhh
Q 013890 210 FYEGYYANKGIKIIKGTVAVGFTTNA---DGEVNEVKLK--DGR--TLEAD-IVVVGVGGRPLISLF 268 (434)
Q Consensus 210 ~~~~~l~~~gV~~~~~~~v~~i~~~~---~g~~~~v~~~--~g~--~i~~d-~vv~a~G~~p~~~~~ 268 (434)
.+...+.+.++++++++.|++|..+. ++++++|++. +|+ ++.++ -||+|.|.--...++
T Consensus 232 yL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL 298 (583)
T 3qvp_A 232 WLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTIL 298 (583)
T ss_dssp HTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHH
T ss_pred HHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHH
Confidence 44444567899999999999998743 5678888874 564 46675 699999965444443
No 351
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.85 E-value=0.00092 Score=66.78 Aligned_cols=56 Identities=13% Similarity=0.157 Sum_probs=40.8
Q ss_pred HHHHHcCcEEEcCCeEEEEEecCC---CcEEEEEeC--CCc--EEEc-CEEEEccCCccChhhh
Q 013890 213 GYYANKGIKIIKGTVAVGFTTNAD---GEVNEVKLK--DGR--TLEA-DIVVVGVGGRPLISLF 268 (434)
Q Consensus 213 ~~l~~~gV~~~~~~~v~~i~~~~~---g~~~~v~~~--~g~--~i~~-d~vv~a~G~~p~~~~~ 268 (434)
...++.|++++.++.|+++..+++ +++.+|... +|+ ++.+ +.||+|+|.-....++
T Consensus 239 ~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL 302 (587)
T 1gpe_A 239 PNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLIL 302 (587)
T ss_dssp TTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHH
T ss_pred HhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHH
Confidence 344567999999999999976332 467777764 564 4677 8999999976555544
No 352
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.85 E-value=0.00088 Score=65.68 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=33.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
..+|++|||+|++|+.+|..|++.|++ |+|||+....
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~---v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQ---TLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCCCCC
Confidence 468999999999999999999998887 9999998743
No 353
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.83 E-value=0.00054 Score=69.23 Aligned_cols=36 Identities=19% Similarity=0.400 Sum_probs=32.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcC--------CCCCcEEEEeCCC-CC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQG--------VKPGELAIISKEA-VA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g--------~~~~~V~vie~~~-~~ 43 (434)
.++|+|||||++||+||..|++.| ++ |+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~---V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGID---VQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEE---EEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCce---EEEEeccCccc
Confidence 478999999999999999999987 54 99999997 53
No 354
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.79 E-value=0.0038 Score=60.15 Aligned_cols=100 Identities=16% Similarity=0.296 Sum_probs=63.1
Q ss_pred CCEEEEeCHHHHHHHHHHHHh--cCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHH
Q 013890 140 KNIFYLREIDDADKLVEAIKA--KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 217 (434)
Q Consensus 140 ~~v~~~~~~~~~~~l~~~l~~--~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (434)
..++......+..++.+.+.. .+.++++|+|||.+|..+|..|.+ ..+|+++++ +++-++.+.+.|.
T Consensus 210 D~v~~i~~~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~---------d~~r~~~la~~l~- 278 (461)
T 4g65_A 210 DEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIER---------NLQRAEKLSEELE- 278 (461)
T ss_dssp CEEEEEEETTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTT-TSEEEEEES---------CHHHHHHHHHHCT-
T ss_pred CEEEEEeccchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhh-cCceEEEec---------CHHHHHHHHHHCC-
Confidence 556666666677766666543 246899999999999999999854 588999974 4555555555442
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEEcCEEEEccCCc
Q 013890 218 KGIKIIKGTVAVGFTTNADGEVNEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 218 ~gV~~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vv~a~G~~ 262 (434)
+..++.+ |+.-..+..+.| .-.+|.++.+|+..
T Consensus 279 -~~~Vi~G----------D~td~~~L~ee~-i~~~D~~ia~T~~D 311 (461)
T 4g65_A 279 -NTIVFCG----------DAADQELLTEEN-IDQVDVFIALTNED 311 (461)
T ss_dssp -TSEEEES----------CTTCHHHHHHTT-GGGCSEEEECCSCH
T ss_pred -CceEEec----------cccchhhHhhcC-chhhcEEEEcccCc
Confidence 1222222 221111111122 34689999999964
No 355
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.75 E-value=0.0082 Score=60.84 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHH-----CCCeEEEEeeCC
Q 013890 164 GKAVVVGGGYIGLELSAALKI-----NNIDVSMVYPEP 196 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~-----~g~~v~~~~~~~ 196 (434)
..|+|||+|+.|+-+|..|++ .|.+|+++++.+
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 369999999999999999999 999999998753
No 356
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.66 E-value=0.0093 Score=58.32 Aligned_cols=61 Identities=11% Similarity=0.174 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEecCCC------cEEEEEeCCC-----cEEEcCEEEEccCCccChh
Q 013890 206 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADG------EVNEVKLKDG-----RTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 206 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g------~~~~v~~~~g-----~~i~~d~vv~a~G~~p~~~ 266 (434)
++.++++...++.+..++++++|++++..+++ ....|++.++ +++.++.||+|+|..|...
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCCC
Confidence 56677777777778889999999999763322 2356666543 3688999999999887654
No 357
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.66 E-value=0.013 Score=59.26 Aligned_cols=49 Identities=14% Similarity=0.233 Sum_probs=36.4
Q ss_pred HHHHHc-Cc-EEEcCCeEEEEEecCC--CcEEEEEe---CCCc--EEEcCEEEEccCC
Q 013890 213 GYYANK-GI-KIIKGTVAVGFTTNAD--GEVNEVKL---KDGR--TLEADIVVVGVGG 261 (434)
Q Consensus 213 ~~l~~~-gV-~~~~~~~v~~i~~~~~--g~~~~v~~---~~g~--~i~~d~vv~a~G~ 261 (434)
+.+++. || +++.++.+.++..+++ +++.+|.. .+|+ .+.++.||+|+|-
T Consensus 159 ~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 159 EAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp HHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 344455 89 9999999999986333 27777653 5665 6899999999994
No 358
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.54 E-value=0.00091 Score=66.28 Aligned_cols=60 Identities=15% Similarity=0.195 Sum_probs=41.1
Q ss_pred HHHHHHHHHcCcEEEcCCeEEEEEec---CC-CcEEEEEeCC--C-c--EEEc-CEEEEccCCccChhhh
Q 013890 209 AFYEGYYANKGIKIIKGTVAVGFTTN---AD-GEVNEVKLKD--G-R--TLEA-DIVVVGVGGRPLISLF 268 (434)
Q Consensus 209 ~~~~~~l~~~gV~~~~~~~v~~i~~~---~~-g~~~~v~~~~--g-~--~i~~-d~vv~a~G~~p~~~~~ 268 (434)
..+...+.+.++++++++.|++|..+ ++ +++++|++.+ | + ++.+ .-||+|.|.--...++
T Consensus 212 ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL 281 (566)
T 3fim_B 212 AYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILL 281 (566)
T ss_dssp HTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHH
T ss_pred HHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHH
Confidence 34455556789999999999999874 12 4677787643 4 3 4667 7799999954333333
No 359
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.38 E-value=0.0057 Score=58.95 Aligned_cols=132 Identities=17% Similarity=0.143 Sum_probs=78.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
.++|.|||.|.+|+++|..|+++|++ |++.|..... .....+.+++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~---V~~~D~~~~~-------------------------------~~~~~~~L~~ 54 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAI---VTVNDGKPFD-------------------------------ENPTAQSLLE 54 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCE---EEEEESSCGG-------------------------------GCHHHHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCE---EEEEeCCccc-------------------------------CChHHHHHHh
Confidence 47899999999999999999999987 9999987420 0112356777
Q ss_pred CCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCC
Q 013890 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNG 164 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~ 164 (434)
.|+++..+... ++ ..++ .+|.+|+++|..+..|.. ..+...++-.+...+-+. . +. +.+
T Consensus 55 ~gi~~~~g~~~-----~~----~~~~---~~d~vv~spgi~~~~p~~---~~a~~~gi~v~~~~e~~~---~-~~--~~~ 113 (451)
T 3lk7_A 55 EGIKVVCGSHP-----LE----LLDE---DFCYMIKNPGIPYNNPMV---KKALEKQIPVLTEVELAY---L-VS--ESQ 113 (451)
T ss_dssp TTCEEEESCCC-----GG----GGGS---CEEEEEECTTSCTTSHHH---HHHHHTTCCEECHHHHHH---H-HC--CSE
T ss_pred CCCEEEECCCh-----HH----hhcC---CCCEEEECCcCCCCChhH---HHHHHCCCcEEeHHHHHH---H-hc--CCC
Confidence 89988876431 10 0010 179999999987765542 211111211222222211 1 11 234
Q ss_pred cEEEECCC---HHHHHHHHHHHHCCCeEEE
Q 013890 165 KAVVVGGG---YIGLELSAALKINNIDVSM 191 (434)
Q Consensus 165 ~vvVvG~g---~~g~e~a~~l~~~g~~v~~ 191 (434)
.+.|-|+- -+.--++..|...|.++.+
T Consensus 114 ~IaVTGTnGKTTTt~ml~~iL~~~g~~~~~ 143 (451)
T 3lk7_A 114 LIGITGSNGKTTTTTMIAEVLNAGGQRGLL 143 (451)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 55666642 2334456777788887643
No 360
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.29 E-value=0.0048 Score=61.53 Aligned_cols=61 Identities=7% Similarity=-0.016 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCC-CcEEEEEeCCCcEEEcCEEEEccCCccC
Q 013890 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD-GEVNEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~-g~~~~v~~~~g~~i~~d~vv~a~G~~p~ 264 (434)
...+.+.+.+.++..|.++++++.|.+|..+++ |++.+|.+.+|+++.||.||.....-|.
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 457888899999999999999999999987443 7888888888999999999997766553
No 361
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.06 E-value=0.0057 Score=54.10 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 6999999999999999999999999999987654
No 362
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.05 E-value=0.024 Score=57.19 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=29.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHC------CCeEEEEeeC
Q 013890 164 GKAVVVGGGYIGLELSAALKIN------NIDVSMVYPE 195 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~------g~~v~~~~~~ 195 (434)
-.|+|||+|..|+-+|..+++. |.+|.++++.
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~ 60 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA 60 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec
Confidence 3799999999999999999997 9999999874
No 363
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.61 E-value=0.018 Score=55.38 Aligned_cols=82 Identities=17% Similarity=0.154 Sum_probs=59.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEE
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNE 241 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~ 241 (434)
.++++.|+|.|.+|+-+|..|.+.|.+|+..+..+... ++ ..+.|++.||+++.+.....+
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~----~~-----~~~~L~~~gi~~~~g~~~~~~---------- 68 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE----NP-----TAQSLLEEGIKVVCGSHPLEL---------- 68 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG----CH-----HHHHHHHTTCEEEESCCCGGG----------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC----Ch-----HHHHHHhCCCEEEECCChHHh----------
Confidence 57899999999999999999999999999998764211 12 224677889998876431100
Q ss_pred EEeCCCcEEEcCEEEEccCCccChhhh
Q 013890 242 VKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 242 v~~~~g~~i~~d~vv~a~G~~p~~~~~ 268 (434)
+. + .+|.||+++|..++.+.+
T Consensus 69 --~~-~---~~d~vv~spgi~~~~p~~ 89 (451)
T 3lk7_A 69 --LD-E---DFCYMIKNPGIPYNNPMV 89 (451)
T ss_dssp --GG-S---CEEEEEECTTSCTTSHHH
T ss_pred --hc-C---CCCEEEECCcCCCCChhH
Confidence 01 0 178999999998876644
No 364
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.57 E-value=0.025 Score=51.83 Aligned_cols=80 Identities=20% Similarity=0.236 Sum_probs=57.8
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEE
Q 013890 162 KNGKAVVVGGGYIGLE-LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVN 240 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e-~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~ 240 (434)
..+++.|||.|-+|+. +|..|.++|.+|+..+..+. ++ ..+.|++.||+++.+.....
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~------~~-----~~~~L~~~gi~v~~g~~~~~---------- 61 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY------PP-----MSTQLEALGIDVYEGFDAAQ---------- 61 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC------TT-----HHHHHHHTTCEEEESCCGGG----------
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC------cH-----HHHHHHhCCCEEECCCCHHH----------
Confidence 4689999999999997 88999999999999987642 11 23457778999876532110
Q ss_pred EEEeCCCcEEEcCEEEEccCCccChhhh
Q 013890 241 EVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 241 ~v~~~~g~~i~~d~vv~a~G~~p~~~~~ 268 (434)
+.. ..+|.||+++|..|+.+.+
T Consensus 62 ---l~~---~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 62 ---LDE---FKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp ---GGS---CCCSEEEECTTCCTTCHHH
T ss_pred ---cCC---CCCCEEEECCCcCCCCHHH
Confidence 000 1379999999998876644
No 365
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.45 E-value=0.01 Score=58.00 Aligned_cols=36 Identities=25% Similarity=0.323 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 199 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~ 199 (434)
|+|+|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCC
Confidence 689999999999999999999999999999887654
No 366
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=95.34 E-value=0.013 Score=53.75 Aligned_cols=74 Identities=11% Similarity=0.081 Sum_probs=49.7
Q ss_pred HHHHHHhcCCCcEEEECCCHHHHHHHHHHHH--CCCeEEEEeeCCccCCcc------cC-HHHHHHHHHHHHHcCcEEEc
Q 013890 154 LVEAIKAKKNGKAVVVGGGYIGLELSAALKI--NNIDVSMVYPEPWCMPRL------FT-ADIAAFYEGYYANKGIKIIK 224 (434)
Q Consensus 154 l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~--~g~~v~~~~~~~~~~~~~------~~-~~~~~~~~~~l~~~gV~~~~ 224 (434)
+.+.+.......|+|||+|+.|+-+|..|++ .|.+|+++++.+.+...+ ++ ..+...+.+.+++.|+++..
T Consensus 56 ~~~~~~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~ 135 (326)
T 3fpz_A 56 YFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYED 135 (326)
T ss_dssp HHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEE
T ss_pred HHhhhhhccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEE
Confidence 3334444456789999999999999999974 699999999876543211 11 11122344566778888876
Q ss_pred CCe
Q 013890 225 GTV 227 (434)
Q Consensus 225 ~~~ 227 (434)
+..
T Consensus 136 ~~~ 138 (326)
T 3fpz_A 136 EGD 138 (326)
T ss_dssp CSS
T ss_pred CCc
Confidence 654
No 367
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.21 E-value=0.028 Score=44.32 Aligned_cols=34 Identities=21% Similarity=0.464 Sum_probs=30.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+.+++|+|+|..|...|..|.+.|++ |+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~---V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKK---VLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCe---EEEEECCH
Confidence 45899999999999999999999987 99999873
No 368
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.15 E-value=0.032 Score=44.74 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=30.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
..+++|+|+|..|...|..|.+.|++ |+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~---V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQN---VTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCC---EEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCC---EEEEECC
Confidence 46799999999999999999999887 9999987
No 369
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.89 E-value=0.019 Score=55.87 Aligned_cols=129 Identities=14% Similarity=0.122 Sum_probs=75.0
Q ss_pred CcCcEEEECCCHHHHH-HHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHH
Q 013890 4 KSFKYVILGGGVSAGY-AAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~-aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
..++|.|||.|-+|++ +|..|.++|++ |++.|.... ...+.+
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~---V~~~D~~~~----------------------------------~~~~~l 63 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQ---ISGSDLAPN----------------------------------SVTQHL 63 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCE---EEEECSSCC----------------------------------HHHHHH
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCe---EEEEECCCC----------------------------------HHHHHH
Confidence 3478999999999997 69999999987 998887521 113456
Q ss_pred HHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcC
Q 013890 83 KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~ 162 (434)
++.|+++..+.. .+. + -.+|.+|+.+|-.+..|.. ..+...++-.+...+- +.+.++ .
T Consensus 64 ~~~gi~~~~g~~-----~~~----~-----~~~d~vV~Spgi~~~~p~~---~~a~~~gi~v~~~~e~---l~~~~~--~ 121 (494)
T 4hv4_A 64 TALGAQIYFHHR-----PEN----V-----LDASVVVVSTAISADNPEI---VAAREARIPVIRRAEM---LAELMR--Y 121 (494)
T ss_dssp HHTTCEEESSCC-----GGG----G-----TTCSEEEECTTSCTTCHHH---HHHHHTTCCEEEHHHH---HHHHHT--T
T ss_pred HHCCCEEECCCC-----HHH----c-----CCCCEEEECCCCCCCCHHH---HHHHHCCCCEEcHHHH---HHHHhc--C
Confidence 778998887632 110 1 1378999999877655542 1111122212222222 222222 1
Q ss_pred CCcEEEECCC---HHHHHHHHHHHHCCCeEEE
Q 013890 163 NGKAVVVGGG---YIGLELSAALKINNIDVSM 191 (434)
Q Consensus 163 ~~~vvVvG~g---~~g~e~a~~l~~~g~~v~~ 191 (434)
.+.+.|-|+- -+.--++..|...|.+.+.
T Consensus 122 ~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~~~ 153 (494)
T 4hv4_A 122 RHGIAVAGTHGKTTTTAMLSSIYAEAGLDPTF 153 (494)
T ss_dssp SEEEEEECSSSHHHHHHHHHHHHHHTTCCCEE
T ss_pred CCEEEEecCCChHHHHHHHHHHHHhcCCCCEE
Confidence 2245666642 2344456677777875443
No 370
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.86 E-value=0.028 Score=42.53 Aligned_cols=34 Identities=9% Similarity=0.244 Sum_probs=29.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcC-CCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g-~~~~~V~vie~~~ 41 (434)
+.+++|+|+|..|...+..|.+.| ++ |+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~---v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYS---VTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEE---EEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCce---EEEEeCCH
Confidence 357999999999999999999988 54 99998873
No 371
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.84 E-value=0.045 Score=43.08 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+.+++|+|.|..|...|..|.+.|++ |+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~---v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIP---LVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCC---EEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCH
Confidence 35799999999999999999999987 99999984
No 372
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.80 E-value=0.034 Score=44.69 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=30.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+++|||+|..|...|..|.+.|.+ |+++++++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~---V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHS---VVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 46899999999999999999998876 99999874
No 373
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.75 E-value=0.027 Score=52.78 Aligned_cols=100 Identities=18% Similarity=0.227 Sum_probs=75.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc-----c-------------------------------------
Q 013890 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR-----L------------------------------------- 202 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~-----~------------------------------------- 202 (434)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+... .
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 5899999999999999999999999999986543110 0
Q ss_pred -------------c-CHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEe-CCC--cEEEcCEEEEccCCccCh
Q 013890 203 -------------F-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKL-KDG--RTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 203 -------------~-~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~-~~g--~~i~~d~vv~a~G~~p~~ 265 (434)
+ ...+.+.+.+..++.|++++.++.+..+.. +++.+..+.. .++ .++.+|+||-|.|.....
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~-~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~v 164 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEF 164 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHH
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeee-ccceeeeeeecccccceEEEEeEEEeCCccccHH
Confidence 0 014556677778889999999999999876 3555544443 233 368999999999976544
No 374
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.70 E-value=0.036 Score=43.35 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=29.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
.+++|||+|..|...|..|.+.|.+ |+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~---v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHD---IVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCe---EEEEECC
Confidence 5799999999999999999998876 9999986
No 375
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.50 E-value=0.047 Score=49.97 Aligned_cols=78 Identities=15% Similarity=0.060 Sum_probs=54.0
Q ss_pred cCcEEEECCCHHHHH-HHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHH
Q 013890 5 SFKYVILGGGVSAGY-AAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~-aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
++++.|||.|.+|++ +|..|.++|++ |++.|+.... ...+.++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~---V~~~D~~~~~---------------------------------~~~~~L~ 47 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFE---VSGCDAKMYP---------------------------------PMSTQLE 47 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCE---EEEEESSCCT---------------------------------THHHHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCE---EEEEcCCCCc---------------------------------HHHHHHH
Confidence 468999999999997 78888999987 9999987420 1134566
Q ss_pred HCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCccccc
Q 013890 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLT 130 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~ 130 (434)
+.|+++..+... +. +.. ..+|.+|+++|-.+..|.
T Consensus 48 ~~gi~v~~g~~~-----~~----l~~---~~~d~vV~Spgi~~~~p~ 82 (326)
T 3eag_A 48 ALGIDVYEGFDA-----AQ----LDE---FKADVYVIGNVAKRGMDV 82 (326)
T ss_dssp HTTCEEEESCCG-----GG----GGS---CCCSEEEECTTCCTTCHH
T ss_pred hCCCEEECCCCH-----HH----cCC---CCCCEEEECCCcCCCCHH
Confidence 778888766321 10 000 137889999887765554
No 376
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.41 E-value=0.042 Score=53.52 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=34.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCC
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP 200 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~ 200 (434)
.+++++|||+|.+|+.+|..|.+.|.+|+++++.+++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 357899999999999999999999999999998876544
No 377
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=94.23 E-value=0.1 Score=50.63 Aligned_cols=36 Identities=19% Similarity=0.414 Sum_probs=33.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
+||+|||||++||+||..|++.|++ |+|+|+++..+
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~---v~v~E~~~~~G 75 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFK---TLLLEARDRIG 75 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCC---EEEECSSSBSB
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCC---EEEEeCCCCCC
Confidence 7999999999999999999999987 99999997643
No 378
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.10 E-value=0.051 Score=49.30 Aligned_cols=38 Identities=18% Similarity=0.331 Sum_probs=33.1
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
||++..+|.|||+|..|.+.|..|+..++ .+|+++|.+
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~--~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKEL--ADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCC--CeEEEEecc
Confidence 66666799999999999999999999887 249999987
No 379
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.10 E-value=0.054 Score=51.44 Aligned_cols=35 Identities=31% Similarity=0.323 Sum_probs=32.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
++++|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 36899999999999999999999999999987654
No 380
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.92 E-value=0.068 Score=41.92 Aligned_cols=34 Identities=15% Similarity=0.353 Sum_probs=30.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+.+++|+|+|..|...|..|.+.|.+ |++++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~---v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHE---VLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---CEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 35799999999999999999998876 89998863
No 381
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.90 E-value=0.11 Score=51.64 Aligned_cols=170 Identities=12% Similarity=0.084 Sum_probs=0.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC----------------------------------------
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV---------------------------------------- 42 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~---------------------------------------- 42 (434)
..+.+++|+|.|..|...|..|.+.+.+ |+++|+++.
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~~~~~~---vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t~~ 201 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLESRNHL---FVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIANLS 201 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTTTTTCC---EEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEECSC
T ss_pred ccCCeEEEECCChHHHHHHHHHHHCCCC---EEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEeCC
Q ss_pred ----------------------------------------------------CCCCCCCccccccCCCCCCCCCCcceec
Q 013890 43 ----------------------------------------------------APYERPALSKAYLFPEGTARLPGFHVCV 70 (434)
Q Consensus 43 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (434)
.....+.....++.......+..+...
T Consensus 202 D~~n~~~~~~ar~~~~~~iiar~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~p~~~~~~~~~~~~~~l~e~~v~- 280 (565)
T 4gx0_A 202 DPDNANLCLTVRSLCQTPIIAVVKEPVHGELLRLAGANQVVPLTRILGRYLGIRATTCGALAHILDSFGNLQIAELPVH- 280 (565)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHHHHC-----------------------
T ss_pred cHHHHHHHHHHHHhcCceEEEEECCHHHHHHHHHcCCCEEEChHHHHHHHHHHHhcccccccchhcccCCceEEEEEEC-
Q ss_pred CCCCCCCCHhHHHHCCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHH
Q 013890 71 GSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDD 150 (434)
Q Consensus 71 ~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~ 150 (434)
+ .......+.+....-..+..+..+.++++.+.-.....+...-.++..|...........-+...
T Consensus 281 ~---s~l~G~~l~el~~~~~~~~~vi~i~r~g~~~~p~~~~~l~~GD~L~v~g~~~~l~~~~~~~~~~~----------- 346 (565)
T 4gx0_A 281 G---TPFAGKTIGESGIRQRTGLSIIGVWERGSLTTPQRETVLTEQSLLVLAGTKSQLAALEYLIGEAP----------- 346 (565)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred C---CccCCCCHHHcCcchhcCCEEEEEEECCEEeCCCCCcEeCCCCEEEEEeCHHHHHHHHHHhcCCC-----------
Q ss_pred HHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCc
Q 013890 151 ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR 201 (434)
Q Consensus 151 ~~~l~~~l~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~ 201 (434)
+.++++|+|.|..|..+|..|.+.|.+|++++..+.....
T Consensus 347 -----------~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~ 386 (565)
T 4gx0_A 347 -----------EDELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCN 386 (565)
T ss_dssp -----------CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC
T ss_pred -----------CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhh
No 382
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.90 E-value=0.063 Score=48.02 Aligned_cols=37 Identities=22% Similarity=0.225 Sum_probs=32.3
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
||+ ..+|.|||+|.-|...|..+++.|++ |+++|+++
T Consensus 1 Mm~-~~kV~VIGaG~mG~~iA~~la~~G~~---V~l~d~~~ 37 (283)
T 4e12_A 1 MTG-ITNVTVLGTGVLGSQIAFQTAFHGFA---VTAYDINT 37 (283)
T ss_dssp CCS-CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSH
T ss_pred CCC-CCEEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCH
Confidence 553 46899999999999999999999986 99999874
No 383
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.82 E-value=0.19 Score=50.07 Aligned_cols=39 Identities=13% Similarity=0.345 Sum_probs=35.2
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
.+.|||+|||+|..|...|..|++.|.+ |++||++++.+
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~---vl~id~~~~~g 44 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQR---VLHVDSRSYYG 44 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSC
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCE---EEEEcCCCccc
Confidence 3469999999999999999999999987 99999998743
No 384
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.79 E-value=0.049 Score=51.98 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~ 196 (434)
.++|+|||+|+.|+-+|..|++.|.+|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3689999999999999999999999999999875
No 385
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.71 E-value=0.077 Score=45.37 Aligned_cols=107 Identities=16% Similarity=0.259 Sum_probs=67.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEE
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNE 241 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~ 241 (434)
.+++++|||+|.+|...+..|.+.|.+|+++.+. +.+++ .+..++.+++++... +.. +.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~-------~~~~l----~~l~~~~~i~~i~~~----~~~--~d---- 88 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT-------VSAEI----NEWEAKGQLRVKRKK----VGE--ED---- 88 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS-------CCHHH----HHHHHTTSCEEECSC----CCG--GG----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC-------CCHHH----HHHHHcCCcEEEECC----CCH--hH----
Confidence 5899999999999999999999999999999753 23443 333445567665321 111 00
Q ss_pred EEeCCCcEEEcCEEEEccCCccChhhhhccccccCCcEEeCC-----CCCCCCCceEEecccc
Q 013890 242 VKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDD-----FFKTSADDVYAVGDVA 299 (434)
Q Consensus 242 v~~~~g~~i~~d~vv~a~G~~p~~~~~~~~~~~~~g~i~vd~-----~~~t~~~~iya~Gd~~ 299 (434)
.-.+|+||.|||.......+...- . .++.||- .+.--.|.++--|+..
T Consensus 89 -------L~~adLVIaAT~d~~~N~~I~~~a--k-~gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 89 -------LLNVFFIVVATNDQAVNKFVKQHI--K-NDQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp -------SSSCSEEEECCCCTHHHHHHHHHS--C-TTCEEEC-----CCSEECCEEEEETTEE
T ss_pred -------hCCCCEEEECCCCHHHHHHHHHHH--h-CCCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 113899999999765444332111 2 3555552 1222467777666655
No 386
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.67 E-value=0.08 Score=50.29 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=45.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CeEEEEeeCCccCCcc----------------cCHHHHHHHHHHHHHcCcEEE
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWCMPRL----------------FTADIAAFYEGYYANKGIKII 223 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g-~~v~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~~~gV~~~ 223 (434)
...+++|||+|..|+-+|..|.+.| .+|+++++.+++.... +.+ ....+.+.+++.|+++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~-~~~~~~~l~~~~g~~~~ 82 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVP-SYDTIQEIMDRTGDKVD 82 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCT-TCHHHHHHHHHHCCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecC-CcHHHHHHHHHhCCccc
Confidence 3568999999999999999999999 8999999877653210 111 12345667778887654
No 387
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=93.67 E-value=0.11 Score=49.87 Aligned_cols=39 Identities=18% Similarity=0.345 Sum_probs=35.2
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
+..+||||||||++|++||..|++.|++ |+|+|+++..+
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~---V~vlE~~~~~G 47 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKK---VLHIDKQDHYG 47 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeCCCCCC
Confidence 3568999999999999999999999987 99999998744
No 388
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.65 E-value=0.067 Score=50.79 Aligned_cols=34 Identities=32% Similarity=0.377 Sum_probs=31.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
+++|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 6899999999999999999999999999987654
No 389
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.62 E-value=0.13 Score=40.43 Aligned_cols=79 Identities=16% Similarity=0.212 Sum_probs=51.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEE
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEV 242 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v 242 (434)
..+++|+|.|..|..++..|.+.|.+|+++++. ++..+ .+++.|+.++.+.. ... .+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~---------~~~~~----~~~~~g~~~i~gd~--------~~~--~~ 63 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETS---------RTRVD----ELRERGVRAVLGNA--------ANE--EI 63 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC---------HHHHH----HHHHTTCEEEESCT--------TSH--HH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC---------HHHHH----HHHHcCCCEEECCC--------CCH--HH
Confidence 468999999999999999999999999999864 33222 34456777654321 000 00
Q ss_pred EeCCCcEEEcCEEEEccCCccCh
Q 013890 243 KLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 243 ~~~~g~~i~~d~vv~a~G~~p~~ 265 (434)
...-+ .-.+|.+|++++.....
T Consensus 64 l~~a~-i~~ad~vi~~~~~~~~n 85 (140)
T 3fwz_A 64 MQLAH-LECAKWLILTIPNGYEA 85 (140)
T ss_dssp HHHTT-GGGCSEEEECCSCHHHH
T ss_pred HHhcC-cccCCEEEEECCChHHH
Confidence 00011 12589999999865433
No 390
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.61 E-value=0.076 Score=49.45 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCC
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~ 196 (434)
++++|||+|..|+++|..+++.|.+|.++++.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 479999999999999999999999999998754
No 391
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.57 E-value=0.081 Score=49.31 Aligned_cols=37 Identities=22% Similarity=0.323 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeC-Ccc
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE-PWC 198 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~-~~~ 198 (434)
.+.+|+|||+|..|+-+|..|.+.|.+|+++++. +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 3578999999999999999999999999999988 543
No 392
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=93.52 E-value=0.075 Score=50.76 Aligned_cols=40 Identities=13% Similarity=0.312 Sum_probs=35.5
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013890 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
|++.+||+|||+|++|+++|..|++.|++ |+|+|+++..+
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~---v~~~e~~~~~g 42 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKK---VLHMDRNPYYG 42 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSC
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCc---EEEEecCCCcc
Confidence 44579999999999999999999999987 99999997643
No 393
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.52 E-value=0.1 Score=41.85 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 197 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~ 197 (434)
.+++++|+|+|.+|..++..|.+.|.+|+++.+.+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 568999999999999999999999999999987654
No 394
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.42 E-value=0.072 Score=49.29 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCC
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~ 196 (434)
..++|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999875
No 395
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.34 E-value=0.09 Score=44.92 Aligned_cols=35 Identities=20% Similarity=0.472 Sum_probs=31.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+...|+|||||..|...+..|.+.|.+ |+|++++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~---VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAA---ITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCC---EEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE---EEEECCCC
Confidence 357899999999999999999999876 99998863
No 396
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.27 E-value=0.22 Score=45.25 Aligned_cols=83 Identities=20% Similarity=0.137 Sum_probs=53.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEc-CCeEEEEEecCCCcEEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIK-GTVAVGFTTNADGEVNEV 242 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~-~~~v~~i~~~~~g~~~~v 242 (434)
.++.|+|+|.+|.-+|..|.+.|.+|+++.|.+ . +.+++.|+.+.. ...-..+.. ..+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~----------~-----~~i~~~Gl~~~~~~~g~~~~~~------~~~ 61 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD----------Y-----ETVKAKGIRIRSATLGDYTFRP------AAV 61 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT----------H-----HHHHHHCEEEEETTTCCEEECC------SCE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh----------H-----HHHHhCCcEEeecCCCcEEEee------eee
Confidence 489999999999999999999999999998742 1 345566776643 100001100 011
Q ss_pred EeCCCcE-E-EcCEEEEccCCccChhhh
Q 013890 243 KLKDGRT-L-EADIVVVGVGGRPLISLF 268 (434)
Q Consensus 243 ~~~~g~~-i-~~d~vv~a~G~~p~~~~~ 268 (434)
. .+-.+ . .+|+||+|+-.....+.+
T Consensus 62 ~-~~~~~~~~~~DlVilavK~~~~~~~l 88 (320)
T 3i83_A 62 V-RSAAELETKPDCTLLCIKVVEGADRV 88 (320)
T ss_dssp E-SCGGGCSSCCSEEEECCCCCTTCCHH
T ss_pred E-CCHHHcCCCCCEEEEecCCCChHHHH
Confidence 1 22111 2 689999999876655544
No 397
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.16 E-value=0.083 Score=50.28 Aligned_cols=34 Identities=29% Similarity=0.430 Sum_probs=31.3
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
+++|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 6899999999999999999999999999986654
No 398
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.14 E-value=0.1 Score=50.57 Aligned_cols=37 Identities=24% Similarity=0.272 Sum_probs=33.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 199 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~ 199 (434)
..+|+|||+|..|+-+|..|.+.|.+|+++++.+++.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 47 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPG 47 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCC
Confidence 5689999999999999999999999999999876643
No 399
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.12 E-value=0.087 Score=49.53 Aligned_cols=34 Identities=26% Similarity=0.347 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 197 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~ 197 (434)
..|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3799999999999999999999999999998754
No 400
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.10 E-value=0.12 Score=50.26 Aligned_cols=77 Identities=17% Similarity=0.141 Sum_probs=55.8
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEE
Q 013890 162 KNGKAVVVGGGYIGLE-LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVN 240 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e-~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~ 240 (434)
..+++.|||-|-+|+- +|..|.+.|.+|+..+... .+ ..+.|++.||+++.+... +.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~-------~~-----~~~~l~~~gi~~~~g~~~-------~~--- 78 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP-------NS-----VTQHLTALGAQIYFHHRP-------EN--- 78 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC-------CH-----HHHHHHHTTCEEESSCCG-------GG---
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC-------CH-----HHHHHHHCCCEEECCCCH-------HH---
Confidence 4689999999999996 7999999999999987542 12 124577889998876321 10
Q ss_pred EEEeCCCcEEEcCEEEEccCCccChhhh
Q 013890 241 EVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 241 ~v~~~~g~~i~~d~vv~a~G~~p~~~~~ 268 (434)
+. .+|+||+++|..++.+.+
T Consensus 79 ---~~-----~~d~vV~Spgi~~~~p~~ 98 (494)
T 4hv4_A 79 ---VL-----DASVVVVSTAISADNPEI 98 (494)
T ss_dssp ---GT-----TCSEEEECTTSCTTCHHH
T ss_pred ---cC-----CCCEEEECCCCCCCCHHH
Confidence 11 379999999988765533
No 401
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.10 E-value=0.13 Score=42.54 Aligned_cols=33 Identities=24% Similarity=0.130 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHc-CCCCCcEEEEeCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQ-GVKPGELAIISKEA 41 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~-g~~~~~V~vie~~~ 41 (434)
.+++|||.|..|...|..|.+. |++ |+++|+++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~---V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKI---SLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSC---EEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCe---EEEEECCH
Confidence 4799999999999999999998 987 99999873
No 402
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=93.09 E-value=0.085 Score=49.44 Aligned_cols=35 Identities=23% Similarity=0.212 Sum_probs=32.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 36999999999999999999999999999988743
No 403
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=92.96 E-value=0.084 Score=50.03 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCC
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~ 196 (434)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 404
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.91 E-value=0.094 Score=49.02 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 197 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~ 197 (434)
.+++|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3799999999999999999999999999998653
No 405
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.85 E-value=0.1 Score=48.75 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~ 196 (434)
..+++|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3579999999999999999999999999999873
No 406
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=92.83 E-value=0.1 Score=51.06 Aligned_cols=61 Identities=20% Similarity=0.228 Sum_probs=46.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcc-----------------cCHHHHHHHHHHHHHcCcEEEc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL-----------------FTADIAAFYEGYYANKGIKIIK 224 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~gV~~~~ 224 (434)
..+++|||+|..|+-+|..|.+.|.+|+++++.+++..+. +... ...+.+.+++.|++...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~-~~~~~~l~~~lgl~~~~ 81 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT-QNRILRLAKELGLETYK 81 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT-CHHHHHHHHHTTCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC-cHHHHHHHHHcCCccee
Confidence 4589999999999999999999999999999887653221 1111 34566778888987653
No 407
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=92.73 E-value=0.099 Score=51.18 Aligned_cols=36 Identities=22% Similarity=0.414 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CeEEEEeeCCcc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g-~~v~~~~~~~~~ 198 (434)
..+|+|||+|..|+-+|..|.+.| .+|+++++.+++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 358999999999999999999999 999999987654
No 408
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.70 E-value=0.082 Score=51.55 Aligned_cols=36 Identities=19% Similarity=0.180 Sum_probs=31.7
Q ss_pred cEEEECCCHHHHHHHHHHHH-CCCeEEEEeeCCccCC
Q 013890 165 KAVVVGGGYIGLELSAALKI-NNIDVSMVYPEPWCMP 200 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~-~g~~v~~~~~~~~~~~ 200 (434)
.|+|||+|.+|+-+|..|++ .|.+|+++++.+++..
T Consensus 12 DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 58999999999999999987 5999999998876543
No 409
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.65 E-value=0.12 Score=47.99 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 195 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~ 195 (434)
...++|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 357999999999999999999999999999975
No 410
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=92.65 E-value=0.07 Score=52.43 Aligned_cols=34 Identities=18% Similarity=0.395 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHH------------CCCeEEEEeeCC
Q 013890 163 NGKAVVVGGGYIGLELSAALKI------------NNIDVSMVYPEP 196 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~------------~g~~v~~~~~~~ 196 (434)
..+|+|||+|+.|+-+|..|++ .|.+|+++++.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 5689999999999999999999 899999999764
No 411
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.65 E-value=0.12 Score=44.08 Aligned_cols=32 Identities=34% Similarity=0.553 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 7 KYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 7 dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+++|+|+|..|...|..|.+.|++ |+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~---v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYG---VVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCC---EEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 599999999999999999999887 99999873
No 412
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.56 E-value=0.11 Score=47.99 Aligned_cols=36 Identities=28% Similarity=0.278 Sum_probs=29.6
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
||+ +.+|.|||+|..|...|..|++.|++ |++++++
T Consensus 1 mm~-~mki~iiG~G~~G~~~a~~L~~~g~~---V~~~~r~ 36 (359)
T 1bg6_A 1 MIE-SKTYAVLGLGNGGHAFAAYLALKGQS---VLAWDID 36 (359)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CCC-cCeEEEECCCHHHHHHHHHHHhCCCE---EEEEeCC
Confidence 554 36899999999999999999998875 9999876
No 413
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.54 E-value=0.14 Score=46.29 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=30.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+.+|.|||+|.-|...|..|++.|++ |+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~---V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHT---VVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 46799999999999999999999886 99999874
No 414
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.52 E-value=0.11 Score=50.06 Aligned_cols=37 Identities=24% Similarity=0.384 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
...+++|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 3578999999999999999999999999999988654
No 415
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.49 E-value=0.13 Score=46.88 Aligned_cols=39 Identities=26% Similarity=0.406 Sum_probs=32.3
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
|++...+|.|||+|..|.+.|..|+..++ ..+|+++|.+
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~-~~~l~l~D~~ 39 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGI-TDELVVIDVN 39 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCC-CceEEEEecc
Confidence 66666799999999999999999999876 2359999986
No 416
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.49 E-value=0.19 Score=40.04 Aligned_cols=33 Identities=12% Similarity=0.214 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 195 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~ 195 (434)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 568999999999999999999999999999864
No 417
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.45 E-value=0.26 Score=44.79 Aligned_cols=85 Identities=18% Similarity=0.235 Sum_probs=51.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEE
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNE 241 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~ 241 (434)
...++.|||+|.+|.-+|..|++.|.+|+++ +.+ +.. +.+++.|+++.... . .... .+ .
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~---------~~~----~~i~~~g~~~~~~~-~-~~~~----~~-~ 76 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP---------QHV----QAIEATGLRLETQS-F-DEQV----KV-S 76 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH---------HHH----HHHHHHCEEEECSS-C-EEEE----CC-E
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH---------hHH----HHHHhCCeEEEcCC-C-cEEE----ee-e
Confidence 4679999999999999999999999999988 432 112 33445677665321 1 1111 00 1
Q ss_pred EEeCCCcE-EEcCEEEEccCCccChhhh
Q 013890 242 VKLKDGRT-LEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 242 v~~~~g~~-i~~d~vv~a~G~~p~~~~~ 268 (434)
+. .+-+. -.+|+||+|+......+.+
T Consensus 77 ~~-~~~~~~~~~D~vilavk~~~~~~~l 103 (318)
T 3hwr_A 77 AS-SDPSAVQGADLVLFCVKSTDTQSAA 103 (318)
T ss_dssp EE-SCGGGGTTCSEEEECCCGGGHHHHH
T ss_pred ee-CCHHHcCCCCEEEEEcccccHHHHH
Confidence 11 11111 2589999999866433333
No 418
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.38 E-value=0.15 Score=47.19 Aligned_cols=36 Identities=28% Similarity=0.285 Sum_probs=31.5
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
++..+|.|||+|.-|.+.|..|++.|++ |+++++++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~---V~l~~r~~ 62 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQK---VRLWSYES 62 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCC---EEEECSCH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCe---EEEEeCCH
Confidence 3356899999999999999999999876 99999874
No 419
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.38 E-value=0.054 Score=51.88 Aligned_cols=77 Identities=14% Similarity=0.127 Sum_probs=54.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEE
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNE 241 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~ 241 (434)
.+++++|||.|.+|+..|..|.+.|.+|+..+....... . ..++ .|+++..+... . . .
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~---~--------~~l~-~G~~~~~g~~~----~---~---~ 61 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG---L--------DKLP-EAVERHTGSLN----D---E---W 61 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT---G--------GGSC-TTSCEEESSCC----H---H---H
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch---h--------HHhh-CCCEEEECCCc----H---H---H
Confidence 578999999999999999999999999999987653211 1 2345 68887655321 0 0 0
Q ss_pred EEeCCCcEEEcCEEEEccCCccChhh
Q 013890 242 VKLKDGRTLEADIVVVGVGGRPLISL 267 (434)
Q Consensus 242 v~~~~g~~i~~d~vv~a~G~~p~~~~ 267 (434)
+. .+|.||+++|..|+.+.
T Consensus 62 --~~-----~~d~vV~s~gi~~~~p~ 80 (439)
T 2x5o_A 62 --LM-----AADLIVASPGIALAHPS 80 (439)
T ss_dssp --HH-----TCSEEEECTTSCTTCHH
T ss_pred --hc-----cCCEEEeCCCCCCCCHH
Confidence 01 36889999998775543
No 420
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=92.34 E-value=0.12 Score=48.17 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
.++|+|||+|.+|+-+|..|+ .|.+|+++++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 578999999999999999999 59999999987544
No 421
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.34 E-value=0.11 Score=49.73 Aligned_cols=129 Identities=13% Similarity=0.176 Sum_probs=75.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCCccccccCCCCCCCCCCcceecCCCCCCCCHhHHHH
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
.++|+|||.|.+|+++|..|+++|++ |+++|.....+. ...++
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~---v~~~D~~~~~~~---------------------------------~~~l~- 47 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVT---PRVMDTRMTPPG---------------------------------LDKLP- 47 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCC---CEEEESSSSCTT---------------------------------GGGSC-
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCE---EEEEECCCCcch---------------------------------hHHhh-
Confidence 46799999999999999999999987 999998753110 02233
Q ss_pred CCcEEEcCCeEEEEeCCCCEEEcCCCcEEEeceEEEccCCCcccccCCCCCCCCCCCEEEEeCHHHHHHHHHHHHhcCCC
Q 013890 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNG 164 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lilAtG~~~~~p~~~~i~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~ 164 (434)
.|+++..+... ... + . .+|.+|+++|..|..|. +......++-.+...+- +.+. .+.+
T Consensus 48 ~G~~~~~g~~~------~~~--~----~-~~d~vV~s~gi~~~~p~---~~~a~~~~~~v~~~~~~---~~~~---~~~~ 105 (439)
T 2x5o_A 48 EAVERHTGSLN------DEW--L----M-AADLIVASPGIALAHPS---LSAAADAGIEIVGDIEL---FCRE---AQAP 105 (439)
T ss_dssp TTSCEEESSCC------HHH--H----H-TCSEEEECTTSCTTCHH---HHHHHHTTCEEECHHHH---HHHH---CCSC
T ss_pred CCCEEEECCCc------HHH--h----c-cCCEEEeCCCCCCCCHH---HHHHHHCCCcEEEHHHH---HHHh---cCCC
Confidence 46666554310 000 0 0 36888999987665444 22211122222222222 2222 2345
Q ss_pred cEEEECCC---HHHHHHHHHHHHCCCeEEEE
Q 013890 165 KAVVVGGG---YIGLELSAALKINNIDVSMV 192 (434)
Q Consensus 165 ~vvVvG~g---~~g~e~a~~l~~~g~~v~~~ 192 (434)
.|.|-|+. -+..-++..|...|.++.+.
T Consensus 106 vI~VTGTnGKTTT~~ml~~iL~~~g~~~~~~ 136 (439)
T 2x5o_A 106 IVAITGSNGKSTVTTLVGEMAKAAGVNVGVG 136 (439)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 66777753 34455677778888887644
No 422
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.29 E-value=0.16 Score=46.10 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=30.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
++.+|+|||+|..|.+.|..|+..++ ..+|.++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~-~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQT-ANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC-SSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 35789999999999999999999875 34599999874
No 423
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=92.14 E-value=0.15 Score=49.58 Aligned_cols=37 Identities=27% Similarity=0.399 Sum_probs=33.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 199 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~ 199 (434)
..+++|||+|..|+-+|..|.+.|.+|+++++.+++.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 4689999999999999999999999999999887654
No 424
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=92.08 E-value=0.15 Score=47.87 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=32.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 199 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~ 199 (434)
.+++|||+|.+|+-+|..|.+.|.+|+++++.+++.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 479999999999999999999999999999876543
No 425
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.99 E-value=0.16 Score=47.03 Aligned_cols=36 Identities=19% Similarity=0.401 Sum_probs=31.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..+|||+|+|.||+.+|..|...|.+ +|+++|++..
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~--~I~v~D~~Gl 223 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGAT--KVTVVDKFGI 223 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCC--eEEEEECCCc
Confidence 46899999999999999999999873 4999999853
No 426
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.93 E-value=0.16 Score=46.13 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=31.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
.+..+|.|||+|..|.+.|..|++.|+. +|+++|++.
T Consensus 2 ~~~~kI~VIGaG~~G~~ia~~la~~g~~--~V~l~D~~~ 38 (317)
T 2ewd_A 2 IERRKIAVIGSGQIGGNIAYIVGKDNLA--DVVLFDIAE 38 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCc--eEEEEeCCc
Confidence 3346899999999999999999998871 299999874
No 427
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.91 E-value=0.16 Score=48.46 Aligned_cols=35 Identities=23% Similarity=0.388 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPW 197 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~-~v~~~~~~~~ 197 (434)
...|+|||+|..|+-+|..|++.|. +|+++++.+.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 3579999999999999999999999 9999998764
No 428
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=91.89 E-value=0.27 Score=47.41 Aligned_cols=38 Identities=21% Similarity=0.371 Sum_probs=32.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
+||+|||||++||+||++|+++|. ..+|+|+|+++..+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~-~~~V~vlEa~~~~G 40 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPC-PPKVVLVESSERLG 40 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSS-CCEEEEECSSSSSB
T ss_pred ceEEEECCcHHHHHHHHHHHhCCC-CCcEEEEeCCCCCC
Confidence 699999999999999999999987 12399999987643
No 429
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.88 E-value=0.19 Score=48.60 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=31.8
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
|+++..+|.|||+|.-|...|..|++.|++ |+++|++.
T Consensus 1 Msm~~~kVgVIGaG~MG~~IA~~la~aG~~---V~l~D~~~ 38 (483)
T 3mog_A 1 MSLNVQTVAVIGSGTMGAGIAEVAASHGHQ---VLLYDISA 38 (483)
T ss_dssp ---CCCCEEEECCSHHHHHHHHHHHHTTCC---EEEECSCH
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCe---EEEEECCH
Confidence 544557899999999999999999999987 99999885
No 430
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=91.86 E-value=0.16 Score=48.54 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=32.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccC
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 199 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~ 199 (434)
.+++|||+|..|+-+|..|.+.|.+|+++++.+++.
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCC
Confidence 479999999999999999999999999999876543
No 431
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.82 E-value=0.17 Score=46.78 Aligned_cols=37 Identities=19% Similarity=0.306 Sum_probs=32.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
..+|||+|+|.+|..+|..|...|.+ +|+++|+....
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~--~I~v~Dr~Gli 228 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVK--NVVAVDRKGIL 228 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTEEC
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCCcc
Confidence 46899999999999999999999863 49999998543
No 432
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.80 E-value=0.18 Score=39.50 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 195 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~ 195 (434)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 568999999999999999999999999999863
No 433
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.74 E-value=0.13 Score=46.23 Aligned_cols=34 Identities=12% Similarity=0.068 Sum_probs=30.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+.+|.|||.|.-|...|..|++.|++ |+++++++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~---V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGG---VTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTC---EEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCe---EEEEeCCH
Confidence 46899999999999999999999986 99998874
No 434
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.73 E-value=0.11 Score=44.36 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=28.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEE-EeCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAI-ISKE 40 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~v-ie~~ 40 (434)
+.+|.|||+|.-|.+.|..|.+.|++ |++ ++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~---V~~v~~r~ 56 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIP---AIIANSRG 56 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCC---EEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE---EEEEECCC
Confidence 46899999999999999999998876 887 6665
No 435
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.71 E-value=0.18 Score=47.10 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=30.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|+|||+|.+|+.+|..+...|.+ |+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~---V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAV---VSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCE---EEEEcCCH
Confidence 46899999999999999999999875 99999884
No 436
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.71 E-value=0.28 Score=44.39 Aligned_cols=83 Identities=19% Similarity=0.195 Sum_probs=52.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVK 243 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~ 243 (434)
.++.|||+|.+|.-+|..|.+.|.+|+++.|.+ . +.+++.|+++.....-..+.. ..+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~----------~-----~~i~~~g~~~~~~~g~~~~~~------~~~~ 61 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD----------Y-----EAIAGNGLKVFSINGDFTLPH------VKGY 61 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT----------H-----HHHHHTCEEEEETTCCEEESC------CCEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc----------H-----HHHHhCCCEEEcCCCeEEEee------ceee
Confidence 479999999999999999999999999997642 1 335667877653110000100 0111
Q ss_pred eCCCc-EEEcCEEEEccCCccChhhh
Q 013890 244 LKDGR-TLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 244 ~~~g~-~i~~d~vv~a~G~~p~~~~~ 268 (434)
.+-+ .-.+|+|++|+-.....+.+
T Consensus 62 -~~~~~~~~~D~vilavk~~~~~~~l 86 (312)
T 3hn2_A 62 -RAPEEIGPMDLVLVGLKTFANSRYE 86 (312)
T ss_dssp -SCHHHHCCCSEEEECCCGGGGGGHH
T ss_pred -cCHHHcCCCCEEEEecCCCCcHHHH
Confidence 1111 12589999998876655544
No 437
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=91.67 E-value=0.17 Score=48.50 Aligned_cols=34 Identities=21% Similarity=0.247 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 197 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~ 197 (434)
..|+|||+|..|+.+|..|++.|.+|+++++.+.
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 5799999999999999999999999999998764
No 438
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.66 E-value=0.087 Score=46.57 Aligned_cols=34 Identities=21% Similarity=0.387 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
.+.|+|||||..|...+..|.+.|.+ |+|++++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~---VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCK---LTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCE---EEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCE---EEEEcCCC
Confidence 57899999999999999999999876 99999874
No 439
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.66 E-value=0.23 Score=45.04 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=31.2
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
|+...+|.|||+|.-|...|..|.+.|++ |++++++.
T Consensus 27 ~~~~~~I~iIG~G~mG~~~a~~l~~~g~~---V~~~~~~~ 63 (316)
T 2uyy_A 27 TPTDKKIGFLGLGLMGSGIVSNLLKMGHT---VTVWNRTA 63 (316)
T ss_dssp CCCSSCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSG
T ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCE---EEEEeCCH
Confidence 33346899999999999999999998876 99998763
No 440
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=91.61 E-value=0.18 Score=47.38 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
..+++|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 347999999999999999999999999999987654
No 441
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.56 E-value=0.2 Score=49.50 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---CCCeEEEEeeCC
Q 013890 163 NGKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEP 196 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~---~g~~v~~~~~~~ 196 (434)
..+|+|||+|..|+-+|..|++ .|.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4689999999999999999999 999999999864
No 442
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=91.55 E-value=0.13 Score=48.24 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHH-CC-CeEEEEeeCC
Q 013890 164 GKAVVVGGGYIGLELSAALKI-NN-IDVSMVYPEP 196 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~-~g-~~v~~~~~~~ 196 (434)
.+|+|||+|..|+-+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 99 9999999875
No 443
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.47 E-value=0.21 Score=45.48 Aligned_cols=36 Identities=17% Similarity=0.330 Sum_probs=30.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
...+|.|||+|..|...|..|+..|+- +|.++|.+.
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~--~v~L~Di~~ 38 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLG--DVVLFDIVK 38 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEeCCH
Confidence 346899999999999999999998861 299999874
No 444
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.36 E-value=0.22 Score=45.57 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=30.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~-~~~~V~vie~~~ 41 (434)
..+|.|||+|..|.+.|..|++.|+ + |+++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~---V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELAD---VVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCE---EEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe---EEEEECCh
Confidence 3589999999999999999999886 4 99999874
No 445
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=91.33 E-value=0.19 Score=47.40 Aligned_cols=36 Identities=22% Similarity=0.402 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCeEEEEeeCCcc
Q 013890 163 NGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~-g~~v~~~~~~~~~ 198 (434)
..+++|||+|..|+-+|..|++. |.+|+++++.+++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 45899999999999999999998 9999999987654
No 446
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=91.32 E-value=0.39 Score=46.97 Aligned_cols=79 Identities=14% Similarity=0.132 Sum_probs=56.2
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEE
Q 013890 162 KNGKAVVVGGGYIGLE-LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVN 240 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e-~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~ 240 (434)
+.+++.+||-|-+|+- +|..|.+.|.+|+..+.... ++ ..+.|++.||+++.+.....+
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~------~~-----~~~~L~~~gi~~~~G~~~~~~--------- 77 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY------PP-----MSTQLEQAGVTIEEGYLIAHL--------- 77 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------TT-----HHHHHHHTTCEEEESCCGGGG---------
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC------cH-----HHHHHHHCCCEEECCCCHHHc---------
Confidence 5789999999999997 68889999999999886532 11 234677889998765321100
Q ss_pred EEEeCCCcEEEcCEEEEccCCccChhhh
Q 013890 241 EVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 241 ~v~~~~g~~i~~d~vv~a~G~~p~~~~~ 268 (434)
. -.+|+||+++|..+..+.+
T Consensus 78 ----~----~~~d~vV~Spgi~~~~p~l 97 (524)
T 3hn7_A 78 ----Q----PAPDLVVVGNAMKRGMDVI 97 (524)
T ss_dssp ----C----SCCSEEEECTTCCTTSHHH
T ss_pred ----C----CCCCEEEECCCcCCCCHHH
Confidence 0 1378999999987766544
No 447
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.28 E-value=0.2 Score=45.58 Aligned_cols=32 Identities=19% Similarity=0.467 Sum_probs=29.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
.+|.|||+|.-|.+.|..|++.|.+ |++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~---V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHC---VSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCE---EEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCe---EEEEeCC
Confidence 4799999999999999999998875 9999886
No 448
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.25 E-value=0.2 Score=50.86 Aligned_cols=34 Identities=26% Similarity=0.347 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 197 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~ 197 (434)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 306 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEA 306 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 5899999999999999999999999999998643
No 449
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.25 E-value=0.24 Score=45.89 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
++|+|||||..|..++..+++.|++ ++++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~---vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMK---VVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCCC
Confidence 6899999999999999999999998 999998764
No 450
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.24 E-value=0.27 Score=38.11 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=29.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 195 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~ 195 (434)
..+++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 458999999999999999999999999998753
No 451
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.24 E-value=0.19 Score=51.09 Aligned_cols=34 Identities=18% Similarity=0.320 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCc
Q 013890 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 197 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~ 197 (434)
..|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 298 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAVVTLYCADAQ 298 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 5899999999999999999999999999998643
No 452
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.06 E-value=0.15 Score=46.99 Aligned_cols=32 Identities=25% Similarity=0.456 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCC------CeEEEEeeCC
Q 013890 165 KAVVVGGGYIGLELSAALKINN------IDVSMVYPEP 196 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g------~~v~~~~~~~ 196 (434)
.|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999999998 8999999874
No 453
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.01 E-value=0.2 Score=45.34 Aligned_cols=32 Identities=16% Similarity=0.377 Sum_probs=28.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
.+|.|||+|.-|.+.|..|++.|.+ |++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~---V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGED---VHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCC---EEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCe---EEEEEcC
Confidence 4799999999999999999999876 9999886
No 454
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.00 E-value=0.2 Score=46.44 Aligned_cols=34 Identities=21% Similarity=0.160 Sum_probs=30.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|+|||+|..|+.+|..+...|.+ |+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~---V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAK---TTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCE---EEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 46899999999999999999999875 99999874
No 455
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.97 E-value=0.27 Score=38.32 Aligned_cols=34 Identities=26% Similarity=0.236 Sum_probs=30.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeC
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 195 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~ 195 (434)
..++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999999999999999999999988754
No 456
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.84 E-value=0.25 Score=37.01 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=29.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CeEEEEeeC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPE 195 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g-~~v~~~~~~ 195 (434)
.++++|+|+|.+|..++..|.+.| .+|+++.|.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999999 888888764
No 457
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.83 E-value=0.23 Score=45.86 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=30.8
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
|++..+|.|||.|.-|...|..|++.|++ |+++++++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~---V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHE---CVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCE---EEEEeCCH
Confidence 44457899999999999999999999976 99998873
No 458
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=90.78 E-value=0.2 Score=46.53 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=31.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
+++|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 6899999999999999999999999999987643
No 459
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.76 E-value=0.28 Score=44.50 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=30.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|.|||+|.-|.+.|..|++.|++ |+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~---V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR---VKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC---EEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 46899999999999999999999987 99999884
No 460
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=90.74 E-value=0.28 Score=50.94 Aligned_cols=36 Identities=25% Similarity=0.496 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
.++++|||+|..|+.+|..|.+.|.+|+++++.+.+
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 468999999999999999999999999999977543
No 461
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.68 E-value=0.22 Score=45.09 Aligned_cols=36 Identities=22% Similarity=0.402 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
.++|.|||+|..|.-+|..++..|.+|++++..+..
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~ 41 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQ 41 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 578999999999999999999999999999876543
No 462
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=90.66 E-value=0.27 Score=49.77 Aligned_cols=37 Identities=27% Similarity=0.512 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCcc
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~ 198 (434)
..++++|||+|..|+.+|..|.+.|.+|+++++.+.+
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4679999999999999999999999999999987543
No 463
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.62 E-value=0.2 Score=44.22 Aligned_cols=34 Identities=26% Similarity=0.539 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeC
Q 013890 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 195 (434)
Q Consensus 162 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~ 195 (434)
.+++++|||+|.+|...+..|.+.|.+|+++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 5789999999999999999999999999999764
No 464
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.50 E-value=0.31 Score=44.68 Aligned_cols=32 Identities=22% Similarity=0.524 Sum_probs=29.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
.+|.|||+|.-|.+.|..|++.|.+ |++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~---V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEA---INVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCC---EEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCE---EEEEECh
Confidence 5899999999999999999999876 9999875
No 465
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.34 E-value=0.42 Score=43.10 Aligned_cols=72 Identities=25% Similarity=0.315 Sum_probs=0.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEecCCCcEEEEEe
Q 013890 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVNEVKL 244 (434)
Q Consensus 165 ~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~g~~~~v~~ 244 (434)
+++|||+|.+|.-++..|. .|.+|+++.|.+.-. +.+++.|+++...... .. ..+..
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~-------------~~l~~~G~~~~~~~~~---~~------~~~~~ 60 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQA-------------AAIQSEGIRLYKGGEE---FR------ADCSA 60 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHH-------------HHHHHHCEEEEETTEE---EE------ECCEE
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHH-------------HHHHhCCceEecCCCe---ec------ccccc
Q ss_pred CCCcEEEcCEEEEcc
Q 013890 245 KDGRTLEADIVVVGV 259 (434)
Q Consensus 245 ~~g~~i~~d~vv~a~ 259 (434)
.....-.+|+|++|+
T Consensus 61 ~~~~~~~~D~vilav 75 (307)
T 3ego_A 61 DTSINSDFDLLVVTV 75 (307)
T ss_dssp ESSCCSCCSEEEECC
T ss_pred cccccCCCCEEEEEe
No 466
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=90.29 E-value=0.21 Score=48.21 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CeEEEEeeCCc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPW 197 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g--~~v~~~~~~~~ 197 (434)
..+++|||+|.+|+-+|..|.+.| .+|+++++.+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGER 40 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 358999999999999999999999 99999998654
No 467
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=90.29 E-value=0.17 Score=49.39 Aligned_cols=33 Identities=36% Similarity=0.541 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCeEEEEeeCC
Q 013890 164 GKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEP 196 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~---~g~~v~~~~~~~ 196 (434)
.+|+|||+|..|+-+|..|++ .|.+|+++++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 479999999999999999999 999999999864
No 468
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.25 E-value=0.27 Score=42.85 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=31.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..+|+|||+|..|..+|..|++.|.. +|+|+|++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~--~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVG--NLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCC--eEEEEcCCCc
Confidence 36899999999999999999999863 4999999853
No 469
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.24 E-value=0.27 Score=44.12 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
.+|.|||+|.-|.+.|..|++.|.+ |++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~---V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPH---TTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTT---CEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCe---EEEEEecc
Confidence 4799999999999999999998876 99999873
No 470
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.08 E-value=0.43 Score=43.32 Aligned_cols=92 Identities=14% Similarity=0.092 Sum_probs=0.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC-CeEEEEeeCCccCCcccCHHHHHHHHHHHHHcCcEEEcC-CeEEEEEecCCCcEEE
Q 013890 164 GKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKG-TVAVGFTTNADGEVNE 241 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~~-~~v~~i~~~~~g~~~~ 241 (434)
.++.|||.|..|.-+|..|.+.| .+|+++++.+..... .+...+.+.+.|+ .. +.-..+..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~------~~~~~~~~~~~g~---~~~s~~e~~~~-------- 87 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAA------SGALRARAAELGV---EPLDDVAGIAC-------- 87 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTT------HHHHHHHHHHTTC---EEESSGGGGGG--------
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccc------hHHHHHHHHHCCC---CCCCHHHHHhc--------
Q ss_pred EEeCCCcEEEcCEEEEccCCccChhhhhccccc-cCCcEEeC
Q 013890 242 VKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETD 282 (434)
Q Consensus 242 v~~~~g~~i~~d~vv~a~G~~p~~~~~~~~~~~-~~g~i~vd 282 (434)
+|.|++|+......+.+..-... ..+.+.||
T Consensus 88 ----------aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 88 ----------ADVVLSLVVGAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp ----------CSEEEECCCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred ----------CCEEEEecCCHHHHHHHHHHHhhcCCCCEEEE
No 471
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=89.78 E-value=0.37 Score=46.68 Aligned_cols=36 Identities=19% Similarity=0.147 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CeEEEEeeCCcc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g-~~v~~~~~~~~~ 198 (434)
..+++|||+|..|+-+|..|.+.| .+|+++++.+.+
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 468999999999999999999998 799999987654
No 472
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.75 E-value=0.32 Score=43.93 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=29.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
.+|.|||+|.-|...|..|++.|++ |++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~---V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGND---VTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCc---EEEEECC
Confidence 4799999999999999999998875 9999886
No 473
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.59 E-value=0.48 Score=44.16 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=31.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..+.|.|||+|.-|...+..+++.|++ |+++++.+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~---viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYK---VVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE---EEEEECCCC
Confidence 356899999999999999999999987 899988754
No 474
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.41 E-value=0.31 Score=45.87 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=30.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|+|||+|.+|+.++..++..|.+ |+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~---V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAI---VRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEcCCH
Confidence 35799999999999999999998875 99998874
No 475
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.25 E-value=0.45 Score=44.93 Aligned_cols=34 Identities=21% Similarity=0.410 Sum_probs=31.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|+|||.|..|...|..|.+.|.+ |++||+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~---vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVK---MVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCC---EEEEECCH
Confidence 35799999999999999999999987 99999984
No 476
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.18 E-value=0.25 Score=44.71 Aligned_cols=32 Identities=25% Similarity=0.485 Sum_probs=28.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc-----C-CCCCcEEEEeC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQ-----G-VKPGELAIISK 39 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-~~~~~V~vie~ 39 (434)
+.+|.|||+|.-|...|..|++. | ++ |+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~---V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLE---VSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEE---EEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCC---EEEEEc
Confidence 35899999999999999999998 7 65 999877
No 477
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.17 E-value=0.38 Score=43.65 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
.+|+|||+|..|...|..|++.|+ ..+|++++++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~-~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGI-AREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 579999999999999999999886 12499999873
No 478
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.16 E-value=0.39 Score=43.69 Aligned_cols=37 Identities=24% Similarity=0.288 Sum_probs=29.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCC-CCcEEEEeCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVK-PGELAIISKE 40 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~-~~~V~vie~~ 40 (434)
++.+|.|||+|.-|.+.|..|.+.|.. ..+|++++++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 345799999999999999999998821 1238888876
No 479
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=89.12 E-value=0.46 Score=40.11 Aligned_cols=35 Identities=14% Similarity=0.258 Sum_probs=30.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..++.|||+|.-|.+.|..|++.|++ |+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~---V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHE---VTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCE---EEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEcCCHH
Confidence 35799999999999999999998876 999988753
No 480
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.05 E-value=0.41 Score=44.73 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=30.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|+|||+|.+|+.++..++..|.+ |+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~---V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAV---VMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 46899999999999999999998875 99998874
No 481
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=88.96 E-value=0.22 Score=47.60 Aligned_cols=31 Identities=35% Similarity=0.351 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC-CeEEEEee
Q 013890 164 GKAVVVGGGYIGLELSAALKINN-IDVSMVYP 194 (434)
Q Consensus 164 ~~vvVvG~g~~g~e~a~~l~~~g-~~v~~~~~ 194 (434)
.+++|||+|..|+-+|..|++.| .+|+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 47999999999999999999999 99999998
No 482
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=88.93 E-value=0.36 Score=47.73 Aligned_cols=34 Identities=21% Similarity=0.394 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEeeCC
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~~~~~~~ 196 (434)
.-.++|||+|..|+-+|..|++.|.+|.++++.+
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d 51 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMND 51 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3579999999999999999999999999999874
No 483
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.93 E-value=0.42 Score=43.05 Aligned_cols=34 Identities=24% Similarity=0.169 Sum_probs=30.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+.+|.|||.|.-|...|..|++.|++ |+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~---V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLS---TWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCe---EEEEECCH
Confidence 46899999999999999999999986 99998873
No 484
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.93 E-value=0.36 Score=43.74 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=29.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEeCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKE 40 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~~~~V~vie~~ 40 (434)
.+.+|.|||.|.-|...|..|++.|+ + |++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~---V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAID---MAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCE---EEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCe---EEEEcCC
Confidence 34689999999999999999999997 5 9999886
No 485
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=88.91 E-value=0.31 Score=41.50 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=29.8
Q ss_pred cCcEEEECC-CHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGG-GVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~-G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+++|+|.|| |..|...+..|.+.|++ |.++++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~---V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFE---VTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCE---EEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCE---EEEEEcCc
Confidence 468999995 99999999999998876 99999874
No 486
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.88 E-value=0.48 Score=42.85 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=30.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|.|||+|.-|..-|..++..|++ |+++|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~---V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR---VKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC---EEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 46899999999999999999999998 99999875
No 487
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=88.83 E-value=0.57 Score=43.81 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=31.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
.+.|+|||+|..|...+..+++.|++ |++++.++.
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~---vi~~d~~~~ 48 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYK---IAVLDPTKN 48 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCE---EEEEeCCCC
Confidence 46899999999999999999999997 899988754
No 488
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.76 E-value=0.45 Score=39.09 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCeEEEEeeC
Q 013890 163 NGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPE 195 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~-g~~v~~~~~~ 195 (434)
+.+++|+|.|.+|..++..|.+. |.+|+++++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 56899999999999999999999 9999999764
No 489
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=88.71 E-value=0.48 Score=44.53 Aligned_cols=40 Identities=18% Similarity=0.361 Sum_probs=34.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
..++||.|+|.||+.+|..|.+.|.+..+|.++|+.....
T Consensus 219 d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~ 258 (487)
T 3nv9_A 219 ECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLH 258 (487)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECC
T ss_pred hcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccccc
Confidence 4689999999999999999999998555699999986544
No 490
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.68 E-value=0.34 Score=46.55 Aligned_cols=35 Identities=26% Similarity=0.126 Sum_probs=31.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc-CC-CCCcEEEEeCCCC
Q 013890 5 SFKYVILGGGVSAGYAAREFAKQ-GV-KPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-g~-~~~~V~vie~~~~ 42 (434)
..+|.|||.|.-|+..|..|++. |+ + |+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~---V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEK---VLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCE---EEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCe---EEEEECChh
Confidence 46899999999999999999999 88 7 999999854
No 491
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.68 E-value=0.59 Score=41.42 Aligned_cols=33 Identities=27% Similarity=0.271 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
++|+|.|+|..|...+..|.+.|++ |+++.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~---V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHE---VTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCc
Confidence 5799999999999999999999886 99998874
No 492
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=88.59 E-value=0.55 Score=45.21 Aligned_cols=38 Identities=21% Similarity=0.391 Sum_probs=32.3
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEeCCCCC
Q 013890 3 EKSFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEAVA 43 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~-~~~~V~vie~~~~~ 43 (434)
.+.+||+|||||++|+++|..|++.|+ + |+|+|+.+..
T Consensus 2 ~~~~~~~iiG~G~~g~~~a~~l~~~g~~~---v~~~e~~~~~ 40 (472)
T 1b37_A 2 TVGPRVIVVGAGMSGISAAKRLSEAGITD---LLILEATDHI 40 (472)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHHTTCCC---EEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCc---eEEEeCCCCC
Confidence 356899999999999999999999987 6 9999998753
No 493
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.46 E-value=0.44 Score=45.56 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
.+|.|||.|.-|+..|..|++.|++ |+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~---V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGAN---VRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCE---EEEEECCH
Confidence 4799999999999999999999986 99999874
No 494
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.38 E-value=0.58 Score=42.43 Aligned_cols=36 Identities=31% Similarity=0.415 Sum_probs=30.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013890 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
+..+|+|||+|..|.+.|..|+..++ ..+|.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~-~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSI-VDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCS-CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 34689999999999999999998775 3459999876
No 495
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.35 E-value=0.24 Score=46.03 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 7 KYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 7 dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+|.|||+|.-|.+.|..|++.|++ |+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~---V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCRE---VCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEE---EEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCE---EEEEECCH
Confidence 799999999999999999988876 99998873
No 496
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.27 E-value=0.5 Score=42.65 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=29.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
.+|.|||+|..|...|..|+..|+- +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~--~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELG--DIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCC--eEEEEeCCc
Confidence 4799999999999999999998851 299999863
No 497
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.26 E-value=0.47 Score=43.90 Aligned_cols=33 Identities=36% Similarity=0.425 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
.+|+|+|+|.+|..++..++..|.+ |+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~---V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQ---VQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCE---EEEEeCCH
Confidence 6899999999999999999998874 99999873
No 498
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=88.26 E-value=0.57 Score=41.22 Aligned_cols=33 Identities=33% Similarity=0.518 Sum_probs=29.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
.+++|||+|-+|.+++..|++.|.+ |+|+.|+.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~---v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQ---VSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 5799999999999999999999844 99998873
No 499
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=88.17 E-value=0.56 Score=42.76 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=31.7
Q ss_pred CCCCcCcEEEECC-CHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013890 1 MAEKSFKYVILGG-GVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 1 Mm~~~~dvvIIG~-G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
||++.+.|+|.|| |..|...+..|.++|++ |+++++..
T Consensus 1 ~M~~~~~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~ 39 (341)
T 3enk_A 1 SMSTKGTILVTGGAGYIGSHTAVELLAHGYD---VVIADNLV 39 (341)
T ss_dssp -CCSSCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCCS
T ss_pred CCCCCcEEEEecCCcHHHHHHHHHHHHCCCc---EEEEecCC
Confidence 5666678999995 89999999999999886 99998764
No 500
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=88.14 E-value=0.44 Score=49.61 Aligned_cols=35 Identities=20% Similarity=0.490 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCc
Q 013890 163 NGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPW 197 (434)
Q Consensus 163 ~~~vvVvG~g~~g~e~a~~l~~~g~-~v~~~~~~~~ 197 (434)
..+|+|||+|.+|+-+|..|++.|. +|+++++.+.
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 3589999999999999999999998 9999998753
Done!