Query 013892
Match_columns 434
No_of_seqs 412 out of 3006
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 08:26:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013892.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013892hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0258 Alanine aminotransfera 100.0 2.5E-71 5.5E-76 518.8 30.1 374 51-431 3-377 (475)
2 PLN02231 alanine transaminase 100.0 2.3E-69 4.9E-74 557.8 42.9 425 1-427 1-428 (534)
3 PTZ00377 alanine aminotransfer 100.0 3.2E-59 6.9E-64 480.9 42.4 372 53-425 2-385 (481)
4 PLN02368 alanine transaminase 100.0 1.2E-55 2.6E-60 442.9 41.4 362 54-425 4-377 (407)
5 COG0436 Aspartate/tyrosine/aro 100.0 1.1E-50 2.4E-55 404.6 33.0 301 68-426 6-313 (393)
6 KOG0257 Kynurenine aminotransf 100.0 6.4E-46 1.4E-50 353.7 25.6 302 62-427 9-328 (420)
7 PRK13355 bifunctional HTH-doma 100.0 7.2E-45 1.6E-49 377.4 35.0 309 60-425 118-433 (517)
8 PRK09147 succinyldiaminopimela 100.0 1.9E-44 4.1E-49 363.1 33.7 309 63-425 3-317 (396)
9 TIGR03538 DapC_gpp succinyldia 100.0 9.4E-44 2E-48 357.7 33.5 309 62-425 1-316 (393)
10 PRK07366 succinyldiaminopimela 100.0 4E-44 8.7E-49 359.9 30.6 306 62-425 4-312 (388)
11 PLN00175 aminotransferase fami 100.0 3.1E-43 6.8E-48 355.5 33.6 298 61-425 32-332 (413)
12 PRK07681 aspartate aminotransf 100.0 2.3E-43 5E-48 355.5 32.4 304 62-425 6-312 (399)
13 PRK08960 hypothetical protein; 100.0 5.3E-43 1.2E-47 351.6 32.4 300 62-425 6-308 (387)
14 PLN02187 rooty/superroot1 100.0 5.9E-43 1.3E-47 357.4 32.0 286 95-425 64-357 (462)
15 PRK06290 aspartate aminotransf 100.0 7.5E-43 1.6E-47 352.1 32.1 279 95-425 42-323 (410)
16 PLN00145 tyrosine/nicotianamin 100.0 1E-42 2.3E-47 353.1 32.4 303 71-425 33-343 (430)
17 PRK08068 transaminase; Reviewe 100.0 1.2E-42 2.7E-47 349.2 31.6 305 63-426 7-314 (389)
18 PRK08636 aspartate aminotransf 100.0 1.7E-42 3.7E-47 349.6 32.6 308 65-425 10-321 (403)
19 PRK06855 aminotransferase; Val 100.0 1.5E-42 3.2E-47 352.7 32.0 285 97-425 32-325 (433)
20 PRK06348 aspartate aminotransf 100.0 1.3E-42 2.9E-47 348.2 30.9 277 97-425 29-307 (384)
21 TIGR03540 DapC_direct LL-diami 100.0 1.5E-42 3.2E-47 347.9 30.7 279 97-425 29-310 (383)
22 PLN02656 tyrosine transaminase 100.0 2.7E-42 5.9E-47 348.6 32.3 285 97-425 31-322 (409)
23 PRK05942 aspartate aminotransf 100.0 2.4E-42 5.2E-47 347.6 31.7 304 63-425 10-316 (394)
24 PRK06207 aspartate aminotransf 100.0 3.5E-42 7.7E-47 347.2 32.7 299 75-425 20-324 (405)
25 PRK09276 LL-diaminopimelate am 100.0 2.5E-42 5.4E-47 346.5 31.3 304 63-425 6-312 (385)
26 PLN00143 tyrosine/nicotianamin 100.0 2.7E-42 5.8E-47 348.5 31.6 285 96-425 31-323 (409)
27 PRK09148 aminotransferase; Val 100.0 1.3E-41 2.7E-46 343.3 31.4 302 65-425 7-311 (405)
28 PRK07337 aminotransferase; Val 100.0 1.8E-41 3.9E-46 340.6 31.2 300 62-425 4-306 (388)
29 PRK05839 hypothetical protein; 100.0 3.5E-41 7.5E-46 336.7 32.1 275 97-422 24-301 (374)
30 PRK12414 putative aminotransfe 100.0 5.7E-41 1.2E-45 336.4 32.0 277 97-425 29-307 (384)
31 PRK07590 L,L-diaminopimelate a 100.0 3.4E-41 7.5E-46 340.7 30.2 306 59-425 2-335 (409)
32 PRK09265 aminotransferase AlaT 100.0 1.2E-40 2.7E-45 336.2 32.9 307 62-425 7-320 (404)
33 PRK06107 aspartate aminotransf 100.0 7.6E-41 1.6E-45 337.5 31.2 304 63-425 8-314 (402)
34 PRK09257 aromatic amino acid a 100.0 3.1E-41 6.8E-46 339.7 27.3 272 142-426 47-333 (396)
35 PRK07682 hypothetical protein; 100.0 9.3E-41 2E-45 334.3 30.1 277 97-425 20-299 (378)
36 TIGR03537 DapC succinyldiamino 100.0 2.2E-40 4.7E-45 328.3 31.7 261 139-425 13-278 (350)
37 KOG0259 Tyrosine aminotransfer 100.0 3.1E-40 6.7E-45 309.5 30.1 285 97-425 61-352 (447)
38 PTZ00376 aspartate aminotransf 100.0 6.4E-41 1.4E-45 338.2 27.5 255 160-425 65-337 (404)
39 PRK08912 hypothetical protein; 100.0 2.2E-40 4.8E-45 332.6 31.3 277 97-425 26-305 (387)
40 PRK09082 methionine aminotrans 100.0 1.3E-40 2.8E-45 334.1 28.6 277 97-425 30-309 (386)
41 TIGR01264 tyr_amTase_E tyrosin 100.0 2.3E-40 4.9E-45 334.0 30.4 286 95-425 29-319 (401)
42 PRK06108 aspartate aminotransf 100.0 2.9E-40 6.4E-45 331.1 30.6 279 97-425 24-305 (382)
43 PTZ00433 tyrosine aminotransfe 100.0 2.4E-40 5.2E-45 334.9 30.2 285 97-425 33-328 (412)
44 PLN02450 1-aminocyclopropane-1 100.0 3.3E-40 7.2E-45 337.7 31.1 260 160-425 79-347 (468)
45 PRK07550 hypothetical protein; 100.0 5.3E-40 1.2E-44 329.7 31.5 304 63-425 4-309 (386)
46 PRK07683 aminotransferase A; V 100.0 7.8E-40 1.7E-44 328.5 32.1 276 97-425 28-306 (387)
47 PRK07777 aminotransferase; Val 100.0 1.5E-39 3.3E-44 326.5 32.2 278 97-425 24-305 (387)
48 PLN02607 1-aminocyclopropane-1 100.0 1.2E-39 2.6E-44 331.3 31.4 259 160-425 88-354 (447)
49 PRK08361 aspartate aminotransf 100.0 1E-39 2.2E-44 328.2 30.5 276 97-425 33-312 (391)
50 PRK05764 aspartate aminotransf 100.0 1.5E-39 3.3E-44 327.2 31.8 306 61-425 4-311 (393)
51 PRK08363 alanine aminotransfer 100.0 1.3E-39 2.8E-44 328.2 30.9 281 97-425 30-315 (398)
52 PLN02376 1-aminocyclopropane-1 100.0 1.7E-39 3.6E-44 333.8 31.1 259 160-425 87-354 (496)
53 PRK05957 aspartate aminotransf 100.0 2.3E-39 5.1E-44 325.3 31.4 277 97-425 27-306 (389)
54 PRK07324 transaminase; Validat 100.0 4.7E-40 1E-44 328.4 25.4 269 96-425 25-295 (373)
55 COG1167 ARO8 Transcriptional r 100.0 2E-39 4.2E-44 330.5 29.5 278 128-427 89-375 (459)
56 PRK07309 aromatic amino acid a 100.0 9.8E-39 2.1E-43 321.0 33.9 278 97-425 30-310 (391)
57 PRK08175 aminotransferase; Val 100.0 4.6E-39 1E-43 323.9 30.2 279 97-425 29-310 (395)
58 TIGR01265 tyr_nico_aTase tyros 100.0 7.7E-39 1.7E-43 323.0 31.1 284 97-425 31-321 (403)
59 PLN02397 aspartate transaminas 100.0 5.7E-39 1.2E-43 325.3 29.6 254 160-425 84-355 (423)
60 PRK07568 aspartate aminotransf 100.0 1.5E-38 3.3E-43 320.3 31.0 277 97-425 30-308 (397)
61 PF00155 Aminotran_1_2: Aminot 100.0 5.4E-39 1.2E-43 319.6 23.6 287 98-425 2-295 (363)
62 PRK01533 histidinol-phosphate 100.0 6.5E-39 1.4E-43 319.0 23.7 264 97-425 29-292 (366)
63 TIGR03542 DAPAT_plant LL-diami 100.0 5.7E-38 1.2E-42 316.6 30.6 301 62-425 4-328 (402)
64 PRK15481 transcriptional regul 100.0 1.6E-38 3.4E-43 323.5 26.7 250 142-425 101-356 (431)
65 PRK02610 histidinol-phosphate 100.0 4E-38 8.7E-43 314.7 28.0 261 139-425 41-304 (374)
66 PRK09275 aspartate aminotransf 100.0 1.9E-38 4.1E-43 324.0 24.9 267 97-422 100-423 (527)
67 COG1168 MalY Bifunctional PLP- 100.0 1.7E-37 3.7E-42 293.4 28.5 267 139-426 38-308 (388)
68 PRK06358 threonine-phosphate d 100.0 1.1E-37 2.5E-42 309.1 28.6 253 139-425 32-284 (354)
69 TIGR03539 DapC_actino succinyl 100.0 1.9E-37 4.2E-42 308.0 29.0 285 69-425 2-289 (357)
70 PRK07865 N-succinyldiaminopime 100.0 3.4E-37 7.5E-42 307.0 30.4 266 97-425 27-295 (364)
71 COG0079 HisC Histidinol-phosph 100.0 1.2E-37 2.5E-42 305.9 25.9 256 132-426 28-283 (356)
72 PRK14809 histidinol-phosphate 100.0 1.1E-37 2.3E-42 309.8 26.0 262 97-424 30-291 (357)
73 PRK06836 aspartate aminotransf 100.0 1.6E-36 3.4E-41 305.3 33.9 273 97-425 33-319 (394)
74 PRK03317 histidinol-phosphate 100.0 1.3E-37 2.8E-42 310.5 25.4 260 139-425 39-298 (368)
75 PRK08153 histidinol-phosphate 100.0 4.4E-37 9.5E-42 306.6 25.8 262 97-425 32-293 (369)
76 PRK05166 histidinol-phosphate 100.0 5.3E-37 1.1E-41 306.4 26.3 267 97-425 36-302 (371)
77 PLN03026 histidinol-phosphate 100.0 8.6E-37 1.9E-41 305.5 26.5 259 97-425 52-310 (380)
78 PRK03158 histidinol-phosphate 100.0 6.8E-37 1.5E-41 304.3 24.9 264 97-425 29-292 (359)
79 PRK08056 threonine-phosphate d 100.0 1.7E-36 3.7E-41 301.0 27.3 264 97-425 20-283 (356)
80 PRK08637 hypothetical protein; 100.0 4E-36 8.6E-41 301.8 29.7 290 97-425 3-312 (388)
81 PRK09105 putative aminotransfe 100.0 1.6E-36 3.5E-41 302.4 26.6 247 139-425 56-302 (370)
82 TIGR03801 asp_4_decarbox aspar 100.0 1.3E-36 2.9E-41 310.1 25.1 253 141-422 108-422 (521)
83 PRK07392 threonine-phosphate d 100.0 8.1E-36 1.8E-40 296.7 27.5 249 139-425 35-286 (360)
84 PRK05387 histidinol-phosphate 100.0 6E-36 1.3E-40 296.8 25.3 258 97-425 24-283 (353)
85 PRK09440 avtA valine--pyruvate 100.0 1.7E-35 3.6E-40 300.1 28.1 279 97-426 30-325 (416)
86 PRK04870 histidinol-phosphate 100.0 8.9E-36 1.9E-40 296.0 25.5 249 139-425 39-287 (356)
87 PLN02672 methionine S-methyltr 100.0 1.8E-35 3.8E-40 319.1 28.5 269 139-425 710-989 (1082)
88 KOG0256 1-aminocyclopropane-1- 100.0 1.7E-35 3.8E-40 280.0 24.9 259 160-426 114-379 (471)
89 COG1448 TyrB Aspartate/tyrosin 100.0 5.2E-35 1.1E-39 276.6 28.0 313 67-433 4-329 (396)
90 PRK06225 aspartate aminotransf 100.0 7.7E-35 1.7E-39 291.8 29.9 268 97-425 28-297 (380)
91 PRK14807 histidinol-phosphate 100.0 8E-35 1.7E-39 288.5 27.4 249 138-425 34-282 (351)
92 PRK03967 histidinol-phosphate 100.0 8.6E-35 1.9E-39 286.6 25.2 243 139-424 31-273 (337)
93 PRK02731 histidinol-phosphate 100.0 1.3E-34 2.9E-39 288.7 26.5 264 97-425 32-295 (367)
94 PRK03321 putative aminotransfe 100.0 6.8E-35 1.5E-39 289.2 24.0 252 139-425 35-286 (352)
95 PRK14808 histidinol-phosphate 100.0 1.5E-34 3.2E-39 284.6 25.5 254 97-425 19-272 (335)
96 PRK04781 histidinol-phosphate 100.0 1.3E-34 2.8E-39 288.3 24.5 236 160-425 53-292 (364)
97 PRK01688 histidinol-phosphate 100.0 4.8E-35 1E-39 290.0 20.9 232 160-425 51-285 (351)
98 TIGR01141 hisC histidinol-phos 100.0 2.9E-34 6.3E-39 284.0 23.7 262 97-425 19-280 (346)
99 PRK05664 threonine-phosphate d 100.0 3.3E-33 7.2E-38 274.5 25.4 216 163-425 47-262 (330)
100 PRK06959 putative threonine-ph 100.0 2.2E-33 4.8E-38 276.6 23.2 220 161-425 49-268 (339)
101 PRK07908 hypothetical protein; 100.0 9.3E-33 2E-37 273.6 27.4 240 139-425 35-276 (349)
102 PRK00950 histidinol-phosphate 100.0 3.9E-33 8.4E-38 277.5 24.6 257 97-423 34-291 (361)
103 PRK04635 histidinol-phosphate 100.0 1.2E-33 2.6E-38 280.4 20.6 230 160-425 54-286 (354)
104 PRK06425 histidinol-phosphate 100.0 4.6E-33 9.9E-38 273.8 23.9 229 160-425 34-262 (332)
105 PRK08354 putative aminotransfe 100.0 4.6E-32 1E-36 264.3 26.1 203 141-400 22-224 (311)
106 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.3E-31 2.8E-36 263.3 23.2 225 160-426 41-265 (330)
107 KOG0634 Aromatic amino acid am 100.0 1.3E-30 2.9E-35 248.8 20.7 258 160-426 93-373 (472)
108 cd00609 AAT_like Aspartate ami 100.0 1.6E-27 3.5E-32 235.0 30.5 249 159-426 28-279 (350)
109 KOG1412 Aspartate aminotransfe 100.0 6.4E-28 1.4E-32 221.0 24.8 314 71-433 12-336 (410)
110 KOG1411 Aspartate aminotransfe 100.0 1.5E-28 3.4E-33 228.0 20.0 319 65-433 28-356 (427)
111 PRK13238 tnaA tryptophanase/L- 100.0 1.1E-27 2.4E-32 243.8 28.3 293 66-425 14-335 (460)
112 KOG0633 Histidinol phosphate a 99.9 4.5E-27 9.8E-32 210.6 12.9 233 161-425 64-299 (375)
113 PRK07049 methionine gamma-lyas 99.9 9.4E-25 2E-29 220.8 27.4 228 160-426 77-312 (427)
114 TIGR01822 2am3keto_CoA 2-amino 99.9 4.1E-24 8.8E-29 215.1 31.7 261 129-425 39-312 (393)
115 PRK06939 2-amino-3-ketobutyrat 99.9 2.7E-24 5.9E-29 216.5 28.7 257 140-425 57-316 (397)
116 cd00617 Tnase_like Tryptophana 99.9 1.5E-24 3.2E-29 218.1 25.8 281 79-426 2-311 (431)
117 COG3977 Alanine-alpha-ketoisov 99.9 9.2E-25 2E-29 199.5 20.3 292 76-425 16-324 (417)
118 TIGR00858 bioF 8-amino-7-oxono 99.9 1.6E-23 3.4E-28 207.9 28.3 251 140-425 31-288 (360)
119 TIGR01825 gly_Cac_T_rel pyrido 99.9 1.6E-23 3.4E-28 210.2 28.6 255 139-425 47-304 (385)
120 cd06502 TA_like Low-specificit 99.9 1.2E-23 2.7E-28 207.1 24.1 256 136-426 6-268 (338)
121 TIGR03576 pyridox_MJ0158 pyrid 99.9 2.6E-22 5.5E-27 197.9 29.6 234 140-423 34-271 (346)
122 PLN02242 methionine gamma-lyas 99.9 4.6E-23 9.9E-28 207.9 23.6 212 169-426 78-298 (418)
123 PLN02822 serine palmitoyltrans 99.9 2.6E-22 5.5E-27 206.1 28.2 267 127-425 108-387 (481)
124 PRK10534 L-threonine aldolase; 99.9 3.7E-23 8.1E-28 203.5 20.6 258 130-426 1-267 (333)
125 cd06454 KBL_like KBL_like; thi 99.9 4.8E-22 1E-26 196.6 26.7 265 130-425 3-273 (349)
126 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 7E-22 1.5E-26 196.7 27.2 211 138-380 11-226 (361)
127 PRK05958 8-amino-7-oxononanoat 99.9 1.6E-21 3.6E-26 195.4 29.5 266 128-425 39-310 (385)
128 TIGR02080 O_succ_thio_ly O-suc 99.9 5.9E-22 1.3E-26 197.9 25.3 220 160-426 45-269 (382)
129 PRK13392 5-aminolevulinate syn 99.9 8.2E-22 1.8E-26 199.5 26.5 262 130-425 48-319 (410)
130 PRK06460 hypothetical protein; 99.9 3.2E-22 6.9E-27 199.6 22.9 213 167-426 45-262 (376)
131 PRK08045 cystathionine gamma-s 99.9 9.1E-22 2E-26 196.7 26.0 220 160-426 46-270 (386)
132 PRK06234 methionine gamma-lyas 99.9 4.9E-22 1.1E-26 199.9 24.2 214 165-426 62-285 (400)
133 TIGR03392 FeS_syn_CsdA cystein 99.9 1.2E-21 2.5E-26 197.7 26.6 200 139-377 27-240 (398)
134 PRK10874 cysteine sulfinate de 99.9 1.4E-21 2.9E-26 197.4 26.4 250 139-425 30-315 (401)
135 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.4E-21 5.2E-26 193.4 27.5 225 169-426 53-288 (370)
136 TIGR00707 argD acetylornithine 99.9 7.5E-22 1.6E-26 197.6 23.8 264 129-426 28-310 (379)
137 PRK07179 hypothetical protein; 99.9 6.7E-21 1.5E-25 192.6 28.9 258 130-425 56-322 (407)
138 PLN02483 serine palmitoyltrans 99.9 9.9E-21 2.1E-25 194.8 30.2 268 127-426 99-389 (489)
139 PLN02721 threonine aldolase 99.9 1.8E-21 3.9E-26 192.9 23.5 250 140-425 18-277 (353)
140 PRK02627 acetylornithine amino 99.9 1.2E-21 2.6E-26 197.3 22.2 262 128-426 39-322 (396)
141 PRK08133 O-succinylhomoserine 99.9 2.7E-21 5.9E-26 193.9 24.1 210 169-426 63-278 (390)
142 cd00613 GDC-P Glycine cleavage 99.9 4.2E-21 9E-26 193.5 25.2 261 97-426 20-328 (398)
143 TIGR01976 am_tr_V_VC1184 cyste 99.9 4.4E-21 9.6E-26 193.3 25.3 202 139-379 28-240 (397)
144 PRK08247 cystathionine gamma-s 99.9 3.2E-21 6.8E-26 192.0 23.7 219 160-426 46-269 (366)
145 PRK08861 cystathionine gamma-s 99.9 6.9E-21 1.5E-25 189.9 25.6 220 160-426 47-271 (388)
146 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.2E-20 2.5E-25 189.5 27.3 211 137-379 29-244 (387)
147 PRK08776 cystathionine gamma-s 99.9 7.9E-21 1.7E-25 191.0 25.2 219 161-426 55-278 (405)
148 cd00378 SHMT Serine-glycine hy 99.9 4.6E-21 1E-25 193.5 22.4 255 139-425 30-298 (402)
149 PRK08249 cystathionine gamma-s 99.9 9.4E-21 2E-25 190.1 24.0 210 169-426 66-281 (398)
150 TIGR01328 met_gam_lyase methio 99.9 1.1E-20 2.4E-25 189.4 23.3 218 160-426 53-278 (391)
151 PRK07050 cystathionine beta-ly 99.9 1.3E-20 2.7E-25 189.1 23.6 220 160-426 59-283 (394)
152 TIGR01979 sufS cysteine desulf 99.9 2.8E-20 6.1E-25 187.8 25.7 200 139-376 29-241 (403)
153 PRK07503 methionine gamma-lyas 99.9 1.7E-20 3.6E-25 188.8 23.7 217 161-426 60-284 (403)
154 PRK07504 O-succinylhomoserine 99.9 4.8E-20 1E-24 185.3 26.4 219 160-426 59-283 (398)
155 PRK07811 cystathionine gamma-s 99.9 5.2E-20 1.1E-24 184.5 26.2 215 166-426 60-279 (388)
156 TIGR01437 selA_rel uncharacter 99.9 8.9E-20 1.9E-24 181.3 27.7 233 139-425 24-282 (363)
157 PRK03244 argD acetylornithine 99.9 1.8E-20 3.9E-25 189.0 23.1 260 127-425 42-322 (398)
158 PRK09295 bifunctional cysteine 99.9 3.7E-20 8E-25 187.2 25.3 248 139-424 34-319 (406)
159 PRK01278 argD acetylornithine 99.9 1.7E-20 3.6E-25 188.7 22.5 253 140-426 48-315 (389)
160 PRK02948 cysteine desulfurase; 99.9 1E-20 2.2E-25 189.6 20.8 251 138-426 10-277 (381)
161 TIGR01325 O_suc_HS_sulf O-succ 99.9 5.4E-20 1.2E-24 184.0 25.7 217 161-426 49-271 (380)
162 TIGR01821 5aminolev_synth 5-am 99.9 9.6E-20 2.1E-24 183.9 26.6 263 128-425 45-318 (402)
163 PRK09064 5-aminolevulinate syn 99.9 1.6E-19 3.4E-24 182.7 27.8 264 128-425 46-319 (407)
164 cd00614 CGS_like CGS_like: Cys 99.9 7E-20 1.5E-24 182.7 24.4 213 167-426 40-258 (369)
165 PRK09028 cystathionine beta-ly 99.9 7.2E-20 1.6E-24 182.6 24.2 220 161-427 53-279 (394)
166 PRK06767 methionine gamma-lyas 99.9 1E-19 2.3E-24 182.3 25.3 218 160-426 55-279 (386)
167 PRK07582 cystathionine gamma-l 99.9 7.5E-20 1.6E-24 182.0 24.0 216 160-426 45-265 (366)
168 PLN03227 serine palmitoyltrans 99.9 3.2E-19 6.9E-24 179.1 28.5 257 137-424 10-280 (392)
169 PLN02855 Bifunctional selenocy 99.9 1.2E-19 2.6E-24 184.5 25.6 200 139-376 43-255 (424)
170 cd06453 SufS_like Cysteine des 99.9 8.9E-20 1.9E-24 182.3 24.0 250 138-425 9-294 (373)
171 cd00610 OAT_like Acetyl ornith 99.9 6.6E-20 1.4E-24 185.6 23.3 272 128-427 36-334 (413)
172 PRK07810 O-succinylhomoserine 99.9 1.2E-19 2.7E-24 182.3 24.4 218 160-426 64-288 (403)
173 cd06451 AGAT_like Alanine-glyo 99.8 1.5E-19 3.1E-24 179.6 22.7 253 132-425 2-278 (356)
174 cd00615 Orn_deC_like Ornithine 99.8 5.4E-20 1.2E-24 177.9 18.5 167 169-365 61-232 (294)
175 PRK08574 cystathionine gamma-s 99.8 3.8E-19 8.3E-24 177.9 24.4 212 168-426 54-270 (385)
176 PRK13393 5-aminolevulinate syn 99.8 1.7E-18 3.6E-23 175.1 29.1 263 128-425 45-318 (406)
177 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 6.6E-19 1.4E-23 174.5 25.1 250 137-426 7-279 (355)
178 PRK00451 glycine dehydrogenase 99.8 3.4E-19 7.4E-24 182.4 23.1 221 172-425 110-371 (447)
179 PLN02409 serine--glyoxylate am 99.8 6.5E-19 1.4E-23 177.7 24.2 258 132-425 12-292 (401)
180 PRK05967 cystathionine beta-ly 99.8 7.7E-19 1.7E-23 174.9 24.2 221 163-426 56-281 (395)
181 TIGR01324 cysta_beta_ly_B cyst 99.8 9.3E-19 2E-23 174.4 24.8 219 161-427 42-268 (377)
182 PRK13479 2-aminoethylphosphona 99.8 2.3E-18 5E-23 171.8 27.7 253 134-426 10-285 (368)
183 TIGR02379 ECA_wecE TDP-4-keto- 99.8 2.1E-18 4.7E-23 172.0 27.0 198 140-381 9-208 (376)
184 PRK08064 cystathionine beta-ly 99.8 1.3E-18 2.9E-23 174.5 25.1 211 169-426 56-271 (390)
185 cd06450 DOPA_deC_like DOPA dec 99.8 2.6E-19 5.6E-24 176.9 19.6 228 160-425 27-267 (345)
186 PRK07269 cystathionine gamma-s 99.8 1.7E-18 3.6E-23 171.9 24.5 221 160-426 48-269 (364)
187 TIGR01329 cysta_beta_ly_E cyst 99.8 2.6E-18 5.7E-23 171.6 25.7 219 161-426 39-264 (378)
188 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 1.4E-18 3E-23 175.8 23.9 162 161-365 52-217 (418)
189 PRK07671 cystathionine beta-ly 99.8 1.5E-18 3.3E-23 173.2 23.8 218 161-426 45-267 (377)
190 PRK04073 rocD ornithine--oxo-a 99.8 1.2E-18 2.6E-23 175.6 22.8 265 127-425 39-326 (396)
191 TIGR00713 hemL glutamate-1-sem 99.8 9.9E-19 2.2E-23 177.7 22.3 265 127-424 47-339 (423)
192 PRK11658 UDP-4-amino-4-deoxy-L 99.8 7E-18 1.5E-22 168.8 27.3 194 140-380 12-207 (379)
193 PRK05093 argD bifunctional N-s 99.8 3.1E-18 6.8E-23 172.9 24.6 258 128-427 40-325 (403)
194 TIGR03403 nifS_epsilon cystein 99.8 1.6E-18 3.4E-23 173.9 21.6 253 139-424 10-277 (382)
195 PLN02509 cystathionine beta-ly 99.8 4E-18 8.8E-23 173.0 24.4 222 160-426 124-350 (464)
196 PRK06702 O-acetylhomoserine am 99.8 4E-18 8.7E-23 171.5 23.2 213 169-426 63-311 (432)
197 PRK02936 argD acetylornithine 99.8 4.2E-18 9E-23 170.6 23.1 254 139-426 45-307 (377)
198 TIGR01977 am_tr_V_EF2568 cyste 99.8 4.4E-18 9.5E-23 170.2 23.1 195 137-365 9-212 (376)
199 PRK00011 glyA serine hydroxyme 99.8 3.6E-18 7.7E-23 173.3 22.4 254 139-425 36-302 (416)
200 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 5E-18 1.1E-22 169.7 22.7 194 141-380 10-206 (375)
201 PRK13520 L-tyrosine decarboxyl 99.8 1.7E-17 3.8E-22 165.5 26.2 257 140-425 32-302 (371)
202 PRK08248 O-acetylhomoserine am 99.8 8.4E-18 1.8E-22 170.2 24.0 214 169-427 66-315 (431)
203 PRK05968 hypothetical protein; 99.8 9.3E-18 2E-22 168.3 23.9 210 169-426 65-280 (389)
204 COG0156 BioF 7-keto-8-aminopel 99.8 4.8E-17 1.1E-21 160.1 27.1 264 127-423 38-311 (388)
205 PRK06084 O-acetylhomoserine am 99.8 2.6E-17 5.6E-22 166.5 25.7 214 169-427 60-310 (425)
206 PRK05939 hypothetical protein; 99.8 1.3E-17 2.8E-22 167.3 23.0 211 171-426 51-285 (397)
207 PRK12381 bifunctional succinyl 99.8 1.3E-17 2.8E-22 168.5 23.0 263 129-426 40-323 (406)
208 PRK06176 cystathionine gamma-s 99.8 2.4E-17 5.3E-22 164.6 24.5 218 161-426 45-267 (380)
209 PRK00854 rocD ornithine--oxo-a 99.8 1.4E-17 2.9E-22 168.2 23.0 259 128-426 41-328 (401)
210 TIGR03235 DNA_S_dndA cysteine 99.8 1.1E-17 2.3E-22 166.1 21.8 247 139-424 9-279 (353)
211 PF12897 Aminotran_MocR: Alani 99.8 5.6E-17 1.2E-21 154.7 24.7 245 160-425 61-330 (425)
212 TIGR02326 transamin_PhnW 2-ami 99.8 2.3E-17 4.9E-22 164.4 23.3 223 170-426 38-284 (363)
213 TIGR02006 IscS cysteine desulf 99.8 7.3E-18 1.6E-22 170.2 19.5 248 139-424 14-281 (402)
214 TIGR03812 tyr_de_CO2_Arch tyro 99.8 3.7E-17 7.9E-22 163.3 24.4 257 143-425 35-307 (373)
215 PRK14012 cysteine desulfurase; 99.8 6.4E-18 1.4E-22 170.8 18.8 191 139-365 14-218 (404)
216 PRK07505 hypothetical protein; 99.8 3E-16 6.4E-21 158.5 29.0 254 127-416 45-316 (402)
217 TIGR03402 FeS_nifS cysteine de 99.8 6.2E-17 1.4E-21 162.2 23.2 248 139-424 10-273 (379)
218 PLN02955 8-amino-7-oxononanoat 99.8 3.3E-16 7.1E-21 157.7 27.2 218 128-381 102-343 (476)
219 cd01494 AAT_I Aspartate aminot 99.8 4.1E-17 8.8E-22 143.6 17.1 167 169-365 2-169 (170)
220 cd00616 AHBA_syn 3-amino-5-hyd 99.7 3.3E-16 7.1E-21 155.1 24.1 175 166-380 17-193 (352)
221 TIGR03588 PseC UDP-4-keto-6-de 99.7 1.9E-15 4.1E-20 151.5 29.3 199 140-380 8-210 (380)
222 TIGR03531 selenium_SpcS O-phos 99.7 1.2E-15 2.6E-20 153.5 27.4 240 169-429 103-348 (444)
223 PRK04366 glycine dehydrogenase 99.7 5.7E-16 1.2E-20 159.4 25.3 204 139-376 81-297 (481)
224 PRK05994 O-acetylhomoserine am 99.7 7.5E-16 1.6E-20 156.1 25.7 214 169-427 65-314 (427)
225 TIGR03246 arg_catab_astC succi 99.7 4.9E-16 1.1E-20 156.5 24.3 258 128-426 35-319 (397)
226 PRK08088 4-aminobutyrate amino 99.7 4.7E-16 1E-20 158.1 23.5 271 127-425 40-338 (425)
227 PTZ00125 ornithine aminotransf 99.7 4.5E-16 9.8E-21 157.1 22.6 266 128-425 31-318 (400)
228 PRK15407 lipopolysaccharide bi 99.7 4.5E-15 9.8E-20 150.8 29.7 196 140-381 42-247 (438)
229 PLN02651 cysteine desulfurase 99.7 4.4E-16 9.5E-21 155.2 21.8 249 137-423 8-276 (364)
230 PRK04260 acetylornithine amino 99.7 7.2E-16 1.6E-20 154.3 23.5 233 129-400 30-280 (375)
231 COG0520 csdA Selenocysteine ly 99.7 5E-15 1.1E-19 148.2 28.7 201 139-376 33-245 (405)
232 PRK05937 8-amino-7-oxononanoat 99.7 4.1E-15 8.8E-20 148.6 28.1 260 130-423 6-282 (370)
233 PRK08114 cystathionine beta-ly 99.7 1.4E-15 3.1E-20 151.4 24.1 211 169-426 64-281 (395)
234 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 2.1E-15 4.5E-20 150.0 23.6 212 170-426 58-275 (386)
235 PRK08134 O-acetylhomoserine am 99.7 2.8E-15 6.1E-20 151.8 23.9 213 169-426 66-314 (433)
236 PLN02624 ornithine-delta-amino 99.7 4.8E-15 1E-19 152.3 24.3 270 127-427 74-366 (474)
237 PRK08360 4-aminobutyrate amino 99.7 1E-14 2.3E-19 148.4 25.1 274 127-426 40-344 (443)
238 PF00266 Aminotran_5: Aminotra 99.7 9.2E-15 2E-19 146.0 24.2 202 137-377 8-222 (371)
239 PLN00144 acetylornithine trans 99.7 5.4E-15 1.2E-19 148.0 22.4 251 139-426 31-307 (382)
240 PRK04612 argD acetylornithine 99.7 7.2E-15 1.6E-19 148.1 23.3 256 139-428 56-329 (408)
241 COG0399 WecE Predicted pyridox 99.7 4.1E-14 8.8E-19 138.5 27.2 194 141-381 14-210 (374)
242 PRK07812 O-acetylhomoserine am 99.7 1.2E-14 2.6E-19 147.1 24.1 215 169-427 71-319 (436)
243 TIGR01885 Orn_aminotrans ornit 99.7 9.9E-15 2.1E-19 147.4 23.5 262 127-425 36-326 (401)
244 PF01041 DegT_DnrJ_EryC1: DegT 99.7 3.6E-14 7.9E-19 141.3 26.7 194 142-381 5-201 (363)
245 PRK00062 glutamate-1-semialdeh 99.7 5.9E-15 1.3E-19 149.9 21.3 260 127-425 49-338 (426)
246 PRK06777 4-aminobutyrate amino 99.7 2.6E-14 5.6E-19 144.9 24.2 275 127-427 39-339 (421)
247 KOG1549 Cysteine desulfurase N 99.6 8.7E-15 1.9E-19 142.6 19.0 192 139-365 54-255 (428)
248 PRK09792 4-aminobutyrate trans 99.6 6.1E-14 1.3E-18 142.2 25.1 261 139-425 56-337 (421)
249 KOG0053 Cystathionine beta-lya 99.6 3.8E-14 8.2E-19 137.9 21.5 210 170-425 80-294 (409)
250 COG0626 MetC Cystathionine bet 99.6 6.2E-14 1.4E-18 138.0 23.4 212 169-425 65-282 (396)
251 PRK06434 cystathionine gamma-l 99.6 7.6E-14 1.7E-18 139.0 23.4 209 169-426 66-279 (384)
252 TIGR01814 kynureninase kynuren 99.6 9.2E-14 2E-18 140.6 24.1 217 113-357 8-240 (406)
253 TIGR00700 GABAtrnsam 4-aminobu 99.6 1.1E-13 2.4E-18 140.5 24.4 264 139-427 49-338 (420)
254 PRK07495 4-aminobutyrate amino 99.6 2.4E-13 5.2E-18 137.8 24.8 272 129-427 41-339 (425)
255 PRK06918 4-aminobutyrate amino 99.6 2.6E-13 5.7E-18 138.9 25.2 274 127-426 53-359 (451)
256 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 1.4E-14 3E-19 143.7 14.9 243 160-424 58-316 (417)
257 PRK05613 O-acetylhomoserine am 99.6 2.2E-13 4.7E-18 138.0 23.9 215 169-427 71-324 (437)
258 TIGR02618 tyr_phenol_ly tyrosi 99.6 2.4E-13 5.2E-18 135.4 23.0 198 161-381 65-279 (450)
259 PRK04311 selenocysteine syntha 99.6 5.4E-13 1.2E-17 135.7 26.2 205 134-378 92-315 (464)
260 COG1104 NifS Cysteine sulfinat 99.6 8.3E-14 1.8E-18 135.3 17.3 249 139-425 12-279 (386)
261 PRK08117 4-aminobutyrate amino 99.6 7.5E-13 1.6E-17 134.9 24.5 274 127-426 42-347 (433)
262 PRK06058 4-aminobutyrate amino 99.5 1.5E-12 3.2E-17 133.0 24.7 276 127-427 55-360 (443)
263 PF01212 Beta_elim_lyase: Beta 99.5 1E-13 2.2E-18 132.8 14.9 207 141-379 8-218 (290)
264 TIGR00709 dat 2,4-diaminobutyr 99.5 2.8E-12 6E-17 130.9 25.9 275 129-427 40-346 (442)
265 KOG1359 Glycine C-acetyltransf 99.5 1.6E-13 3.4E-18 125.9 14.7 220 127-381 66-288 (417)
266 PRK13034 serine hydroxymethylt 99.5 1.3E-12 2.8E-17 132.3 23.0 249 140-425 40-305 (416)
267 TIGR00474 selA seryl-tRNA(sec) 99.5 3.7E-12 8.1E-17 129.2 25.8 203 135-378 88-310 (454)
268 COG2008 GLY1 Threonine aldolas 99.5 9E-13 1.9E-17 125.5 19.8 234 137-400 9-247 (342)
269 COG4992 ArgD Ornithine/acetylo 99.5 1E-12 2.3E-17 127.5 19.4 268 127-428 41-326 (404)
270 PRK13237 tyrosine phenol-lyase 99.5 4.6E-12 1E-16 126.6 24.0 199 160-380 71-285 (460)
271 TIGR02407 ectoine_ectB diamino 99.5 4.7E-12 1E-16 128.1 24.4 277 127-427 34-336 (412)
272 PRK09264 diaminobutyrate--2-ox 99.5 6.3E-12 1.4E-16 127.7 25.3 279 127-427 38-340 (425)
273 COG0075 Serine-pyruvate aminot 99.5 3.7E-12 8E-17 124.7 22.4 258 133-430 9-289 (383)
274 PRK03715 argD acetylornithine 99.5 2.6E-12 5.7E-17 129.2 21.6 250 141-426 54-318 (395)
275 PRK02769 histidine decarboxyla 99.5 1.3E-11 2.8E-16 123.1 26.0 184 169-376 63-252 (380)
276 PRK13580 serine hydroxymethylt 99.5 3.3E-12 7.2E-17 129.1 21.5 259 140-428 61-361 (493)
277 PRK15029 arginine decarboxylas 99.5 3.5E-12 7.7E-17 135.3 22.6 243 162-425 199-464 (755)
278 PRK05964 adenosylmethionine--8 99.5 7.2E-12 1.6E-16 127.4 22.6 270 129-425 43-346 (423)
279 PRK08593 4-aminobutyrate amino 99.5 2.7E-11 5.8E-16 123.6 25.9 274 127-426 41-347 (445)
280 PRK06541 hypothetical protein; 99.5 2.2E-11 4.7E-16 124.7 25.0 272 127-426 51-366 (460)
281 PLN03032 serine decarboxylase; 99.5 5.4E-11 1.2E-15 118.0 26.7 208 143-376 38-255 (374)
282 TIGR03372 putres_am_tran putre 99.4 3.3E-11 7.2E-16 122.4 25.5 275 127-427 74-368 (442)
283 COG0160 GabT 4-aminobutyrate a 99.4 3.1E-11 6.8E-16 120.5 23.9 278 126-428 54-363 (447)
284 PTZ00094 serine hydroxymethylt 99.4 2E-11 4.3E-16 125.1 22.1 249 140-425 46-322 (452)
285 PRK11522 putrescine--2-oxoglut 99.4 5.7E-11 1.2E-15 121.4 25.1 274 127-427 81-375 (459)
286 cd00611 PSAT_like Phosphoserin 99.4 8.3E-12 1.8E-16 124.0 18.5 249 132-425 2-278 (355)
287 COG0001 HemL Glutamate-1-semia 99.4 4.3E-11 9.3E-16 117.6 22.2 262 127-428 52-345 (432)
288 PRK05769 4-aminobutyrate amino 99.4 5.7E-11 1.2E-15 121.1 24.1 275 127-426 53-359 (441)
289 KOG1360 5-aminolevulinate synt 99.4 1.5E-11 3.3E-16 117.3 18.1 256 137-429 183-450 (570)
290 COG2873 MET17 O-acetylhomoseri 99.4 3.1E-11 6.8E-16 114.7 19.7 214 169-427 64-313 (426)
291 PLN02482 glutamate-1-semialdeh 99.4 8.4E-11 1.8E-15 120.4 23.6 269 126-428 97-390 (474)
292 TIGR01788 Glu-decarb-GAD gluta 99.4 2E-10 4.4E-15 116.2 24.9 163 140-316 53-235 (431)
293 KOG1368 Threonine aldolase [Am 99.4 5.1E-11 1.1E-15 109.9 18.4 237 162-425 51-294 (384)
294 PRK13578 ornithine decarboxyla 99.4 5.9E-11 1.3E-15 125.0 21.1 240 160-422 166-435 (720)
295 COG0076 GadB Glutamate decarbo 99.4 1.4E-10 3E-15 117.8 23.0 213 140-377 74-300 (460)
296 COG1103 Archaea-specific pyrid 99.4 7.9E-10 1.7E-14 100.9 24.8 225 169-426 63-299 (382)
297 PRK12389 glutamate-1-semialdeh 99.4 3E-10 6.6E-15 115.5 25.1 267 127-426 52-342 (428)
298 PLN03226 serine hydroxymethylt 99.3 2.4E-10 5.2E-15 117.2 24.1 255 140-426 46-334 (475)
299 PRK05639 4-aminobutyrate amino 99.3 4.6E-10 9.9E-15 114.8 25.6 275 127-426 52-361 (457)
300 PLN02414 glycine dehydrogenase 99.3 7.5E-11 1.6E-15 128.6 20.8 237 160-425 554-825 (993)
301 PRK05965 hypothetical protein; 99.3 3.3E-10 7.1E-15 116.1 24.0 271 128-425 46-362 (459)
302 PRK00615 glutamate-1-semialdeh 99.3 3.4E-10 7.5E-15 114.9 23.2 268 127-426 52-343 (433)
303 PRK06062 hypothetical protein; 99.3 6.1E-10 1.3E-14 113.8 24.4 272 127-426 52-358 (451)
304 PRK15399 lysine decarboxylase 99.3 3.1E-10 6.8E-15 119.4 22.0 240 160-426 187-443 (713)
305 PRK06082 4-aminobutyrate amino 99.3 1E-09 2.2E-14 112.4 24.8 271 127-427 71-370 (459)
306 PRK12403 putative aminotransfe 99.3 1.8E-09 4E-14 110.6 26.3 262 139-426 70-368 (460)
307 PLN02760 4-aminobutyrate:pyruv 99.3 1.3E-09 2.8E-14 112.6 25.2 272 127-425 88-407 (504)
308 PRK04013 argD acetylornithine/ 99.3 1.5E-10 3.1E-15 114.9 17.3 222 139-399 40-271 (364)
309 PRK07482 hypothetical protein; 99.3 6.8E-10 1.5E-14 113.8 22.7 274 127-426 49-368 (461)
310 PRK15400 lysine decarboxylase 99.3 2.1E-10 4.5E-15 120.8 19.0 240 160-425 187-442 (714)
311 PLN02880 tyrosine decarboxylas 99.3 7.3E-10 1.6E-14 114.1 22.7 191 161-365 112-320 (490)
312 PRK13360 omega amino acid--pyr 99.3 1.2E-09 2.6E-14 111.4 24.0 260 139-425 62-362 (442)
313 PRK05630 adenosylmethionine--8 99.3 1.2E-09 2.6E-14 110.8 23.7 264 128-424 40-346 (422)
314 PF00202 Aminotran_3: Aminotra 99.3 1.8E-10 3.9E-15 113.6 17.1 262 140-428 33-319 (339)
315 PRK06916 adenosylmethionine--8 99.3 1.5E-09 3.2E-14 111.3 24.2 271 128-426 56-372 (460)
316 PLN02724 Molybdenum cofactor s 99.3 9.2E-10 2E-14 120.2 24.0 183 169-377 80-284 (805)
317 TIGR00508 bioA adenosylmethion 99.3 1.1E-09 2.4E-14 111.3 22.8 259 139-426 61-354 (427)
318 PRK06943 adenosylmethionine--8 99.3 1.7E-09 3.7E-14 110.6 24.2 259 139-425 70-368 (453)
319 PRK06917 hypothetical protein; 99.3 2.4E-09 5.3E-14 109.3 25.3 262 139-427 47-346 (447)
320 PRK07986 adenosylmethionine--8 99.2 7.9E-10 1.7E-14 112.2 21.3 259 139-425 59-350 (428)
321 PRK09221 beta alanine--pyruvat 99.2 1.9E-09 4E-14 110.1 24.1 260 139-425 65-365 (445)
322 PRK07046 aminotransferase; Val 99.2 1.4E-09 2.9E-14 111.2 22.9 263 126-426 73-365 (453)
323 PLN02590 probable tyrosine dec 99.2 2E-09 4.4E-14 111.3 24.3 192 160-365 159-368 (539)
324 PRK06105 aminotransferase; Pro 99.2 1.5E-09 3.2E-14 111.3 23.1 273 127-425 47-365 (460)
325 PLN02271 serine hydroxymethylt 99.2 9.4E-10 2E-14 112.0 20.9 261 139-429 159-458 (586)
326 PRK07481 hypothetical protein; 99.2 4.2E-09 9.2E-14 107.7 26.0 266 139-427 58-362 (449)
327 PRK07030 adenosylmethionine--8 99.2 2.4E-09 5.2E-14 109.8 24.2 269 129-425 48-362 (466)
328 PLN02994 1-aminocyclopropane-1 99.2 2.9E-11 6.2E-16 104.6 8.2 63 163-226 88-152 (153)
329 PRK06173 adenosylmethionine--8 99.2 1.4E-09 3E-14 110.4 21.8 258 139-425 60-352 (429)
330 PRK07678 aminotransferase; Val 99.2 3.2E-09 7E-14 108.6 24.5 269 128-425 47-359 (451)
331 PRK03080 phosphoserine aminotr 99.2 9.4E-10 2E-14 110.2 20.3 247 128-426 11-292 (378)
332 TIGR03799 NOD_PanD_pyr putativ 99.2 3.1E-09 6.7E-14 110.0 24.4 200 160-377 118-356 (522)
333 PF06838 Met_gamma_lyase: Meth 99.2 2.6E-09 5.7E-14 102.0 21.6 186 159-379 45-248 (403)
334 PRK06938 diaminobutyrate--2-ox 99.2 3.9E-09 8.5E-14 108.2 24.7 277 127-427 62-371 (464)
335 TIGR01364 serC_1 phosphoserine 99.2 2E-09 4.4E-14 106.5 21.1 245 140-426 3-271 (349)
336 PF04864 Alliinase_C: Allinase 99.2 9.5E-11 2.1E-15 111.0 10.9 191 169-399 45-241 (363)
337 PRK07480 putative aminotransfe 99.2 3.8E-09 8.1E-14 108.2 23.5 261 139-425 66-364 (456)
338 PRK05355 3-phosphoserine/phosp 99.2 1.6E-09 3.5E-14 107.7 20.2 254 132-426 6-282 (360)
339 PRK07483 hypothetical protein; 99.2 4.7E-09 1E-13 107.1 23.4 259 139-426 46-345 (443)
340 PRK06149 hypothetical protein; 99.2 5.5E-09 1.2E-13 116.3 25.9 275 127-427 584-887 (972)
341 COG0112 GlyA Glycine/serine hy 99.2 1.4E-09 3E-14 104.6 17.9 258 140-430 38-308 (413)
342 PRK07036 hypothetical protein; 99.2 7.2E-09 1.6E-13 106.4 24.6 274 127-425 50-368 (466)
343 PRK06148 hypothetical protein; 99.2 6.2E-09 1.3E-13 116.0 24.5 275 127-427 623-927 (1013)
344 PRK08742 adenosylmethionine--8 99.2 6E-09 1.3E-13 106.9 22.6 248 127-399 63-358 (472)
345 PLN02263 serine decarboxylase 99.1 3.1E-08 6.8E-13 100.2 26.4 179 168-365 130-314 (470)
346 KOG2862 Alanine-glyoxylate ami 99.1 1.1E-08 2.4E-13 95.3 20.6 257 132-428 20-304 (385)
347 PRK06931 diaminobutyrate--2-ox 99.1 2.1E-08 4.6E-13 102.7 25.2 276 127-426 57-364 (459)
348 PF00282 Pyridoxal_deC: Pyrido 99.1 1.1E-08 2.3E-13 102.1 22.2 196 160-373 68-281 (373)
349 PF00464 SHMT: Serine hydroxym 99.1 2.8E-09 6.1E-14 105.7 17.6 232 167-430 62-324 (399)
350 PRK06209 glutamate-1-semialdeh 99.1 9E-09 2E-13 104.8 21.1 245 139-426 64-330 (431)
351 KOG1357 Serine palmitoyltransf 99.1 1.3E-09 2.9E-14 105.9 12.8 235 167-429 178-428 (519)
352 COG1982 LdcC Arginine/lysine/o 99.0 1.4E-08 3E-13 103.2 16.9 173 165-366 67-245 (557)
353 PLN02974 adenosylmethionine-8- 99.0 1.3E-07 2.8E-12 102.3 25.1 248 129-399 366-706 (817)
354 TIGR00461 gcvP glycine dehydro 99.0 1.9E-08 4.1E-13 108.9 18.1 181 160-365 516-709 (939)
355 PRK05367 glycine dehydrogenase 99.0 5.7E-08 1.2E-12 106.8 21.9 207 130-365 501-721 (954)
356 KOG1404 Alanine-glyoxylate ami 99.0 3.3E-08 7.1E-13 94.9 17.4 273 127-425 49-352 (442)
357 TIGR02617 tnaA_trp_ase tryptop 99.0 1.6E-07 3.5E-12 93.4 22.1 200 160-378 67-292 (467)
358 COG0161 BioA Adenosylmethionin 99.0 5.5E-08 1.2E-12 97.0 18.9 258 141-424 62-359 (449)
359 TIGR03811 tyr_de_CO2_Ent tyros 98.9 6.6E-07 1.4E-11 93.8 27.6 169 140-315 95-325 (608)
360 KOG1401 Acetylornithine aminot 98.9 2.9E-07 6.3E-12 89.0 21.9 269 129-425 57-348 (433)
361 TIGR01366 serC_3 phosphoserine 98.9 1.7E-07 3.7E-12 93.3 19.0 244 133-426 7-281 (361)
362 PRK08297 L-lysine aminotransfe 98.8 5.6E-07 1.2E-11 91.9 22.2 269 128-427 45-367 (443)
363 TIGR00699 GABAtrns_euk 4-amino 98.8 3.7E-07 8.1E-12 93.2 20.6 272 127-426 57-389 (464)
364 TIGR01365 serC_2 phosphoserine 98.8 2.8E-07 6.1E-12 91.6 19.2 217 169-426 37-283 (374)
365 PRK12462 phosphoserine aminotr 98.8 4E-07 8.6E-12 89.8 20.0 255 130-425 5-284 (364)
366 COG1921 SelA Selenocysteine sy 98.8 2E-06 4.3E-11 84.1 23.7 202 139-379 38-246 (395)
367 PRK12566 glycine dehydrogenase 98.8 3.2E-07 7E-12 99.0 19.9 169 160-353 529-707 (954)
368 PLN02452 phosphoserine transam 98.8 6.5E-07 1.4E-11 88.9 20.3 255 130-425 8-285 (365)
369 TIGR03251 LAT_fam L-lysine 6-t 98.7 5.6E-06 1.2E-10 84.4 24.4 270 128-426 38-359 (431)
370 KOG1402 Ornithine aminotransfe 98.7 2.9E-07 6.3E-12 86.5 13.2 251 137-427 73-349 (427)
371 COG4100 Cystathionine beta-lya 98.6 4E-06 8.6E-11 78.1 16.5 183 160-376 57-256 (416)
372 COG1003 GcvP Glycine cleavage 98.5 3E-06 6.6E-11 82.7 14.8 145 160-319 95-250 (496)
373 PRK05367 glycine dehydrogenase 98.5 1.3E-05 2.9E-10 88.4 20.7 172 160-376 105-292 (954)
374 PF03841 SelA: L-seryl-tRNA se 98.4 5.8E-07 1.3E-11 87.1 7.5 208 139-379 17-236 (367)
375 PLN02414 glycine dehydrogenase 98.4 2E-05 4.4E-10 86.8 20.2 191 139-376 116-320 (993)
376 COG3844 Kynureninase [Amino ac 98.4 9.3E-06 2E-10 76.6 14.6 219 171-426 76-326 (407)
377 KOG1358 Serine palmitoyltransf 98.4 7E-06 1.5E-10 79.1 13.4 201 128-353 94-307 (467)
378 KOG0629 Glutamate decarboxylas 98.1 0.00011 2.5E-09 71.6 15.3 153 160-317 130-297 (510)
379 KOG1403 Predicted alanine-glyo 98.1 5.8E-05 1.3E-09 70.4 12.1 263 110-399 26-326 (452)
380 PF05889 SLA_LP_auto_ag: Solub 98.1 0.00027 5.8E-09 69.4 17.2 232 172-427 57-292 (389)
381 TIGR00461 gcvP glycine dehydro 97.8 0.0011 2.4E-08 72.5 17.6 127 160-310 93-230 (939)
382 COG3033 TnaA Tryptophanase [Am 97.8 0.00034 7.3E-09 67.1 11.8 201 160-379 72-295 (471)
383 KOG0628 Aromatic-L-amino-acid/ 97.7 0.0013 2.9E-08 65.0 15.8 148 166-318 108-280 (511)
384 PF02347 GDC-P: Glycine cleava 97.7 0.0016 3.5E-08 65.4 16.0 127 160-308 94-231 (429)
385 KOG1383 Glutamate decarboxylas 97.6 0.00034 7.4E-09 69.2 9.0 139 168-317 117-263 (491)
386 COG1932 SerC Phosphoserine ami 97.5 0.0041 8.9E-08 60.2 14.8 259 127-425 3-286 (365)
387 KOG2467 Glycine/serine hydroxy 97.5 0.0038 8.3E-08 60.2 14.2 259 140-430 52-345 (477)
388 KOG3843 Predicted serine hydro 97.5 0.0029 6.4E-08 58.3 12.9 179 183-381 69-252 (432)
389 PLN02672 methionine S-methyltr 97.2 0.01 2.3E-07 66.2 16.2 209 159-393 418-641 (1082)
390 COG0403 GcvP Glycine cleavage 97.0 0.067 1.5E-06 53.0 17.5 128 159-308 103-245 (450)
391 KOG1405 4-aminobutyrate aminot 96.5 0.023 4.9E-07 54.7 10.3 154 253-427 254-409 (484)
392 KOG2040 Glycine dehydrogenase 95.3 0.23 4.9E-06 51.7 12.0 142 160-314 568-721 (1001)
393 PRK12566 glycine dehydrogenase 94.9 1.5 3.3E-05 48.5 17.5 124 160-308 108-242 (954)
394 KOG1201 Hydroxysteroid 17-beta 91.2 7 0.00015 37.4 13.6 142 188-358 36-183 (300)
395 KOG2790 Phosphoserine aminotra 91.1 3.2 7E-05 39.2 11.0 260 129-425 7-290 (370)
396 COG2102 Predicted ATPases of P 90.2 4.6 0.0001 36.8 11.0 153 193-381 4-170 (223)
397 KOG3846 L-kynurenine hydrolase 87.7 8.8 0.00019 36.8 11.3 169 129-313 67-254 (465)
398 PRK08265 short chain dehydroge 86.5 14 0.0003 34.6 12.5 101 191-297 7-108 (261)
399 PF00106 adh_short: short chai 84.0 14 0.00029 31.6 10.4 100 193-298 3-110 (167)
400 TIGR00290 MJ0570_dom MJ0570-re 79.9 23 0.0005 32.6 10.6 99 193-307 4-115 (223)
401 TIGR03581 EF_0839 conserved hy 79.5 45 0.00097 30.4 11.7 161 139-318 38-217 (236)
402 TIGR03679 arCOG00187 arCOG0018 78.6 44 0.00095 30.6 12.1 102 193-307 1-116 (218)
403 COG1105 FruK Fructose-1-phosph 78.3 49 0.0011 32.1 12.6 64 249-315 108-171 (310)
404 PF05368 NmrA: NmrA-like famil 77.9 23 0.0005 32.4 10.2 90 199-307 8-98 (233)
405 PRK06500 short chain dehydroge 76.4 49 0.0011 30.2 12.1 80 192-277 8-87 (249)
406 PRK12936 3-ketoacyl-(acyl-carr 75.8 60 0.0013 29.5 12.5 80 192-277 8-87 (245)
407 COG4221 Short-chain alcohol de 75.1 49 0.0011 30.9 11.1 134 192-352 7-145 (246)
408 PRK05872 short chain dehydroge 74.5 57 0.0012 31.1 12.3 101 190-296 9-113 (296)
409 PRK06194 hypothetical protein; 74.4 65 0.0014 30.3 12.6 80 192-277 8-90 (287)
410 cd01994 Alpha_ANH_like_IV This 74.4 65 0.0014 28.9 12.0 102 193-307 3-118 (194)
411 cd02742 GH20_hexosaminidase Be 74.0 7.3 0.00016 37.7 5.9 71 228-309 21-91 (303)
412 PRK08589 short chain dehydroge 73.2 74 0.0016 29.8 12.6 97 192-295 8-110 (272)
413 TIGR00289 conserved hypothetic 73.0 45 0.00098 30.7 10.5 99 193-307 4-115 (222)
414 PRK07063 short chain dehydroge 72.9 75 0.0016 29.3 12.5 100 191-296 8-114 (260)
415 PRK05876 short chain dehydroge 72.8 72 0.0016 30.0 12.4 82 191-279 7-91 (275)
416 PRK12481 2-deoxy-D-gluconate 3 72.8 63 0.0014 29.8 11.9 79 192-276 10-89 (251)
417 KOG1465 Translation initiation 72.7 93 0.002 29.9 12.4 105 189-310 161-271 (353)
418 COG0373 HemA Glutamyl-tRNA red 72.6 74 0.0016 32.2 12.6 90 197-311 184-274 (414)
419 PRK07024 short chain dehydroge 72.3 69 0.0015 29.6 12.1 80 192-277 4-85 (257)
420 PRK05867 short chain dehydroge 72.1 81 0.0018 29.0 12.5 81 191-277 10-93 (253)
421 PRK07067 sorbitol dehydrogenas 72.1 67 0.0014 29.6 11.9 80 192-277 8-87 (257)
422 cd06568 GH20_SpHex_like A subg 71.9 6.6 0.00014 38.6 5.1 72 228-309 23-94 (329)
423 PRK08862 short chain dehydroge 71.7 59 0.0013 29.7 11.2 81 192-279 7-91 (227)
424 PRK07231 fabG 3-ketoacyl-(acyl 71.6 74 0.0016 29.0 12.1 83 191-279 6-90 (251)
425 PRK06139 short chain dehydroge 71.0 73 0.0016 31.1 12.3 102 191-298 8-114 (330)
426 PRK07478 short chain dehydroge 70.8 87 0.0019 28.8 12.4 80 192-277 8-90 (254)
427 PF10087 DUF2325: Uncharacteri 70.3 50 0.0011 25.8 9.1 71 223-308 10-80 (97)
428 PRK06114 short chain dehydroge 69.4 94 0.002 28.6 12.2 81 191-277 9-93 (254)
429 PRK06483 dihydromonapterin red 69.2 85 0.0019 28.4 11.8 97 192-296 4-102 (236)
430 PRK06935 2-deoxy-D-gluconate 3 68.9 85 0.0018 29.0 11.9 81 191-277 16-98 (258)
431 PRK08339 short chain dehydroge 68.9 94 0.002 28.9 12.2 96 192-295 10-112 (263)
432 PRK05717 oxidoreductase; Valid 68.8 76 0.0017 29.2 11.5 80 192-277 12-91 (255)
433 TIGR02415 23BDH acetoin reduct 68.8 89 0.0019 28.6 12.0 96 193-294 3-103 (254)
434 TIGR01832 kduD 2-deoxy-D-gluco 68.7 94 0.002 28.3 12.6 82 190-277 5-87 (248)
435 PRK07523 gluconate 5-dehydroge 68.6 97 0.0021 28.5 12.8 81 191-277 11-94 (255)
436 cd06562 GH20_HexA_HexB-like Be 68.0 9 0.0002 37.9 5.1 67 228-309 23-89 (348)
437 PRK07097 gluconate 5-dehydroge 67.9 1E+02 0.0022 28.5 12.6 82 191-278 11-95 (265)
438 PRK08277 D-mannonate oxidoredu 67.7 1.1E+02 0.0023 28.7 12.4 81 191-277 11-94 (278)
439 TIGR03573 WbuX N-acetyl sugar 67.7 1.2E+02 0.0026 29.8 13.0 107 190-317 60-174 (343)
440 PRK08063 enoyl-(acyl carrier p 66.9 79 0.0017 28.9 11.1 81 192-278 6-90 (250)
441 PRK06841 short chain dehydroge 66.7 1E+02 0.0023 28.1 12.4 81 191-277 16-96 (255)
442 PRK08263 short chain dehydroge 66.5 93 0.002 29.1 11.7 80 192-277 5-84 (275)
443 PLN02955 8-amino-7-oxononanoat 66.4 1.7E+02 0.0036 30.4 15.3 138 160-314 109-261 (476)
444 PRK11889 flhF flagellar biosyn 66.4 1.6E+02 0.0034 30.0 15.5 155 139-313 191-363 (436)
445 PF01902 ATP_bind_4: ATP-bindi 65.5 49 0.0011 30.4 9.1 100 193-308 4-116 (218)
446 PRK07791 short chain dehydroge 65.5 1.2E+02 0.0027 28.6 12.6 99 192-297 8-121 (286)
447 PRK12859 3-ketoacyl-(acyl-carr 65.4 66 0.0014 29.8 10.3 100 191-297 7-125 (256)
448 cd06570 GH20_chitobiase-like_1 65.3 9.7 0.00021 37.1 4.7 65 228-309 23-87 (311)
449 PRK12743 oxidoreductase; Provi 65.2 79 0.0017 29.2 10.9 80 192-277 4-87 (256)
450 PRK08085 gluconate 5-dehydroge 65.2 1.1E+02 0.0025 28.0 12.6 100 191-296 10-114 (254)
451 smart00642 Aamy Alpha-amylase 64.9 31 0.00066 30.2 7.4 27 288-314 68-94 (166)
452 COG0300 DltE Short-chain dehyd 64.9 81 0.0018 29.9 10.6 98 192-296 7-112 (265)
453 PRK10538 malonic semialdehyde 64.9 1.1E+02 0.0024 28.0 11.7 79 193-277 3-81 (248)
454 PRK07825 short chain dehydroge 64.8 1.2E+02 0.0025 28.3 12.0 79 192-277 7-85 (273)
455 PRK06482 short chain dehydroge 64.5 1E+02 0.0023 28.7 11.6 80 192-277 4-83 (276)
456 PRK06128 oxidoreductase; Provi 64.4 89 0.0019 29.8 11.3 101 191-297 56-164 (300)
457 PRK07666 fabG 3-ketoacyl-(acyl 63.5 1.2E+02 0.0025 27.6 12.4 84 192-281 9-95 (239)
458 PRK07109 short chain dehydroge 63.5 1.3E+02 0.0027 29.4 12.3 80 191-276 9-91 (334)
459 PRK06079 enoyl-(acyl carrier p 63.2 91 0.002 28.8 10.8 81 191-279 8-91 (252)
460 PRK12429 3-hydroxybutyrate deh 63.2 1.2E+02 0.0026 27.7 11.7 82 191-278 5-89 (258)
461 TIGR01470 cysG_Nterm siroheme 63.1 96 0.0021 28.1 10.5 94 189-310 8-102 (205)
462 PRK12938 acetyacetyl-CoA reduc 62.7 94 0.002 28.3 10.8 79 193-277 6-88 (246)
463 PRK07062 short chain dehydroge 62.5 1.3E+02 0.0028 27.8 12.4 80 191-276 9-93 (265)
464 PF02662 FlpD: Methyl-viologen 62.4 26 0.00057 29.0 6.1 58 237-304 29-91 (124)
465 PRK08936 glucose-1-dehydrogena 62.3 1.2E+02 0.0025 28.1 11.4 82 190-277 7-92 (261)
466 COG1184 GCD2 Translation initi 62.0 1.6E+02 0.0034 28.5 12.3 108 188-313 117-232 (301)
467 PF14258 DUF4350: Domain of un 62.0 41 0.00089 24.3 6.6 60 228-309 10-70 (70)
468 PRK13394 3-hydroxybutyrate deh 61.6 1.3E+02 0.0028 27.5 11.9 80 192-277 9-91 (262)
469 PRK08176 pdxK pyridoxal-pyrido 61.5 86 0.0019 29.8 10.4 56 252-314 68-130 (281)
470 PF08543 Phos_pyr_kin: Phospho 61.5 25 0.00054 32.8 6.6 56 251-314 42-97 (246)
471 PRK06484 short chain dehydroge 61.3 96 0.0021 32.2 11.7 79 192-276 270-349 (520)
472 PRK05854 short chain dehydroge 61.2 1.1E+02 0.0023 29.5 11.2 80 192-277 16-100 (313)
473 PF08659 KR: KR domain; Inter 61.2 1.1E+02 0.0025 26.7 10.7 98 194-297 4-110 (181)
474 PRK08643 acetoin reductase; Va 61.1 1.3E+02 0.0029 27.5 12.2 80 193-278 5-87 (256)
475 cd06569 GH20_Sm-chitobiase-lik 61.0 18 0.00039 37.1 5.9 81 228-308 27-115 (445)
476 PRK06484 short chain dehydroge 61.0 1E+02 0.0022 32.0 11.8 80 192-277 7-86 (520)
477 PF05378 Hydant_A_N: Hydantoin 61.0 1.2E+02 0.0026 26.8 11.7 46 251-303 130-176 (176)
478 PRK07792 fabG 3-ketoacyl-(acyl 60.8 1.6E+02 0.0034 28.2 13.0 97 191-295 13-116 (306)
479 COG0816 Predicted endonuclease 60.8 37 0.0008 28.9 6.8 55 252-311 40-97 (141)
480 PRK05678 succinyl-CoA syntheta 60.8 27 0.00059 33.6 6.7 75 221-313 50-126 (291)
481 PRK06113 7-alpha-hydroxysteroi 60.7 1.4E+02 0.003 27.5 12.5 98 191-294 12-113 (255)
482 PRK08278 short chain dehydroge 60.4 1.5E+02 0.0032 27.7 12.6 80 192-277 8-97 (273)
483 PRK06463 fabG 3-ketoacyl-(acyl 60.3 1.4E+02 0.003 27.4 12.4 79 191-277 8-86 (255)
484 PRK08993 2-deoxy-D-gluconate 3 60.1 1.4E+02 0.0031 27.4 12.9 82 191-279 11-93 (253)
485 PRK06182 short chain dehydroge 59.7 1.4E+02 0.0031 27.7 11.6 77 192-277 5-81 (273)
486 PRK07985 oxidoreductase; Provi 59.0 1.5E+02 0.0031 28.3 11.6 99 191-296 50-157 (294)
487 COG2240 PdxK Pyridoxal/pyridox 58.9 77 0.0017 30.2 9.2 55 253-314 54-115 (281)
488 PRK07453 protochlorophyllide o 58.3 1.8E+02 0.0039 28.0 12.4 80 192-277 8-90 (322)
489 PRK07856 short chain dehydroge 58.2 1.5E+02 0.0033 27.1 11.7 76 191-277 7-82 (252)
490 KOG1199 Short-chain alcohol de 58.2 58 0.0012 28.7 7.5 77 194-277 13-90 (260)
491 PRK04296 thymidine kinase; Pro 58.2 58 0.0013 29.0 8.1 98 200-314 17-117 (190)
492 PRK09242 tropinone reductase; 58.1 1.5E+02 0.0033 27.2 12.6 99 192-296 11-116 (257)
493 PRK11070 ssDNA exonuclease Rec 58.0 1.1E+02 0.0025 32.5 11.3 100 196-312 52-160 (575)
494 PRK05650 short chain dehydroge 57.8 1.4E+02 0.003 27.7 11.2 81 192-278 2-85 (270)
495 PRK14467 ribosomal RNA large s 57.5 1.5E+02 0.0032 29.4 11.4 38 276-313 286-328 (348)
496 PRK12384 sorbitol-6-phosphate 57.2 1.6E+02 0.0034 27.1 12.1 80 192-277 4-88 (259)
497 COG0159 TrpA Tryptophan syntha 56.6 1.8E+02 0.0039 27.6 11.5 92 200-302 108-203 (265)
498 PRK12935 acetoacetyl-CoA reduc 56.6 1.6E+02 0.0034 26.8 11.3 80 192-277 8-91 (247)
499 PRK08220 2,3-dihydroxybenzoate 56.4 1.6E+02 0.0034 26.8 11.6 75 191-277 9-83 (252)
500 TIGR01019 sucCoAalpha succinyl 56.2 35 0.00076 32.8 6.6 75 221-313 48-124 (286)
No 1
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-71 Score=518.81 Aligned_cols=374 Identities=58% Similarity=0.955 Sum_probs=360.0
Q ss_pred CCCCcccccccChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCc
Q 013892 51 TSSPAITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSI 130 (434)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~ 130 (434)
.+.+.++++++|++|.+++|+|||+|+.+|.|++++|++| .+.||++||++|||||+.+||+|+||+|||+++|.+|.+
T Consensus 3 ~~~~~lt~~~~N~~V~k~eYAVRG~i~~rA~El~~eL~~~-~~~PF~eiI~aNIGnpqamgQ~PiTF~RQvlal~~~p~l 81 (475)
T KOG0258|consen 3 RSAKALTLDSLNPNVKKAEYAVRGPIVIRADELEKELKKG-VKKPFDEIIRANIGNPQAMGQKPITFLRQVLALCQYPEL 81 (475)
T ss_pred ccccccchhhcChhhhhhhhhhccchhhhHHHHHHHHHhc-ccCChHHHHhhcCCCHHHhCCCChhHHHHHHHHhcChhh
Confidence 3567889999999999999999999999999999999999 678999999999999999999999999999999999999
Q ss_pred ccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH
Q 013892 131 LDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL 210 (434)
Q Consensus 131 l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 210 (434)
||-++ +|.++++++++.|...++ +.+.|+.++|++-+|+.+|+|+.+|+|.+++|++|++|+|++.++..++..+
T Consensus 82 Ld~~~----fp~Dai~RA~~~L~~~gG-s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~ 156 (475)
T KOG0258|consen 82 LDSPE----FPTDAIKRAKRILNDCGG-SLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLL 156 (475)
T ss_pred cCCCC----CCHHHHHHHHHHHHhcCC-cccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHH
Confidence 99665 999999999999999876 7999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHH
Q 013892 211 IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (434)
Q Consensus 211 ~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~ 290 (434)
+..+++.|++|.|+|+.|...+..+|+..++|+++++++|++|+++|++.++++. +++++|+++++||+||||.+++++
T Consensus 157 ~~~~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e 235 (475)
T KOG0258|consen 157 IAGKKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEE 235 (475)
T ss_pred hcCCCCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHH
Confidence 9778899999999999999999999999999999999999999999999999988 888999999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCC-CceEEEEecCCCCCCCCCCceeEEEEEecCC
Q 013892 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK-DISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (434)
Q Consensus 291 ~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~-~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~ 369 (434)
.+++|+.+|.+++++++.||+|++++|.+...|+|+++++.+|++.++ ++.++.++|.||++.|.||.|+||+.+++.+
T Consensus 236 ~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~ 315 (475)
T KOG0258|consen 236 NIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRD 315 (475)
T ss_pred HHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCC
Confidence 999999999999999999999999999987779999999999998777 8899999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013892 370 AEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKANIG 431 (434)
Q Consensus 370 ~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 431 (434)
+++.+++.++.+...|++..+|..+..+++.|..++.+++.+.++++.+.+.|+++++.+.+
T Consensus 316 prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~ 377 (475)
T KOG0258|consen 316 PRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTED 377 (475)
T ss_pred hhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987764
No 2
>PLN02231 alanine transaminase
Probab=100.00 E-value=2.3e-69 Score=557.81 Aligned_cols=425 Identities=84% Similarity=1.281 Sum_probs=349.9
Q ss_pred CchhhhcccccccccccccccccCC---CcccccccccCcccccCCCCCCCCCCCCCcccccccChhhhcccccccchhH
Q 013892 1 MRRFVIGRGRNFLNRSHQQNLLSSS---SSHCQSRFLSSTSVIDSPSSSSMAPTSSPAITVDSLNPKVLKCEYAVRGEIV 77 (434)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (434)
|++++.++.+++.+++.+-....++ +.|++.++. +..++++-...+++.+...+++++||++|.+++|+|||+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~vrg~~~ 78 (534)
T PLN02231 1 MRRFLINQAKGLVDHSRRQHHKSPSFLSPQPRPLASL--SRFSSTSEMSASDSTSSLPVTLDTINPKVLKCEYAVRGEIV 78 (534)
T ss_pred CchHHHhHHHHHHHHhhhhhhcCCCCCCCCCCchhHH--HhhhhhhhcccccccCCCcCChhhcCHHHHHhhhhccchHH
Confidence 8899999999888776554222222 111221111 00111111111233466789999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCC
Q 013892 78 SIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPG 157 (434)
Q Consensus 78 ~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~ 157 (434)
.+|++++++|++|++++||++||++|||||+.+||+|++|+|++++++.+|++|+++.+...+|.++++++.+.+.....
T Consensus 79 ~~a~~~~~~~~~~~~~~pf~~~~~~nig~p~~~~~~~~~~~r~v~~~~~~p~~i~~~~~~~~fp~~~i~~a~~~l~~~~~ 158 (534)
T PLN02231 79 TIAQRLQEELKTNPGSYPFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSLLDKSETHGLFSADAIERAWQILDQIPG 158 (534)
T ss_pred HHHHHHHHHHhcCCCcCChhhhhhhccCCHHHcCCCccHHHHHHHHhccCCccCCCCCccccCCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999998876432
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCC
Q 013892 158 RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGG 237 (434)
Q Consensus 158 ~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~ 237 (434)
...++|+++.|.++||++||+|+.+++|+++++++|++|+|+++++.+++++++..+||.|+++.|+|+.|...++..|+
T Consensus 159 ~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~ 238 (534)
T PLN02231 159 RATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGG 238 (534)
T ss_pred ccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCC
Confidence 24788999999999999999999999999999999999999999999999999734799999999999999999999999
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCcc
Q 013892 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (434)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 317 (434)
++++|+++++++|++|+++|++++++++.++.++|+|+++|||||||.+++.+++++|+++|+++|++||+||+|++++|
T Consensus 239 ~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y 318 (534)
T PLN02231 239 TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVY 318 (534)
T ss_pred EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhccc
Confidence 99999999888899999999999988766666799999999999999999999999999999999999999999999999
Q ss_pred CCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHH
Q 013892 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLV 397 (434)
Q Consensus 318 ~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~ 397 (434)
++..++.++.++...++....++++|+++||||+|+|+||+|+||+++.+.++++++++.+......|++..+|.++..+
T Consensus 319 ~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~ 398 (534)
T PLN02231 319 VPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASLV 398 (534)
T ss_pred CCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHHH
Confidence 65445778877755443212345689999999987689999999998765689999999888776678999999999999
Q ss_pred cCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 398 MSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 398 l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+++++..+..++.|.++++.+++.++++.+
T Consensus 399 l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~ 428 (534)
T PLN02231 399 MSPPKPGDESYESYMAEKDGILSSLARRAK 428 (534)
T ss_pred hCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 987643333444444444444444444433
No 3
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=3.2e-59 Score=480.91 Aligned_cols=372 Identities=52% Similarity=0.895 Sum_probs=322.5
Q ss_pred CCcccccccChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCccc
Q 013892 53 SPAITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILD 132 (434)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~ 132 (434)
++.++++.+|+++.+++|++++.+..+|++++++|++|++++|+.+||+||||+|+.+|++|.+++|++++....|++|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~ 81 (481)
T PTZ00377 2 MKSFTVEDINPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLE 81 (481)
T ss_pred CCcCCccccCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhc
Confidence 56789999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred ccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc
Q 013892 133 RSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (434)
Q Consensus 133 ~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~ 212 (434)
++.+...+|..+++++.+.++.... ....|++..|.++||++||+++.+++|+++++++|++|+|+++++.+++++++.
T Consensus 82 ~~~~~~~~P~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~ 160 (481)
T PTZ00377 82 DPSVSSLFPADVVARAKEYLNAIGG-GTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIG 160 (481)
T ss_pred CccccccCCHHHHHHHHHHHHhCCC-cccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcc
Confidence 9888888999999998887776432 367899999999999999999999999999999999999999999999999873
Q ss_pred CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHH
Q 013892 213 SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (434)
Q Consensus 213 ~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l 292 (434)
++||.|+++.|+|+.|...++..|++++.++++++++|++|+++|++++++...++.++|+|+++|||||||.+++.+++
T Consensus 161 ~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~ 240 (481)
T PTZ00377 161 DPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVM 240 (481)
T ss_pred CCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHH
Confidence 48999999999999999999999999999999988889999999999998765555579999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCC-CceEEEEecCCCCCCCCCCceeEEEEEecCCHH
Q 013892 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK-DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (434)
Q Consensus 293 ~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~-~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~ 371 (434)
++|+++|+++|++||+||+|.++.|++..++.++.....++...++ ++++|+++||||+++|+||||+||+++.+.+++
T Consensus 241 ~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~ 320 (481)
T PTZ00377 241 EEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPE 320 (481)
T ss_pred HHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHH
Confidence 9999999999999999999999999654346677665555542211 236899999999855899999999985444899
Q ss_pred HHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHH-----------HHHHHHHHHHHHHHHHHH
Q 013892 372 VREQIYKVASVNLCSNISGQILASLVMSPPKVGDES-----------YESYCAERDGILSSLARR 425 (434)
Q Consensus 372 ~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~-----------~~~~~~~r~~l~~~L~~~ 425 (434)
+++++.+......+++.++|.++..+++++...+.. ++.|+++|+.+.+.|++.
T Consensus 321 li~~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 385 (481)
T PTZ00377 321 VREQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKI 385 (481)
T ss_pred HHHHHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999998877655689999999999999864332222 234566666666666543
No 4
>PLN02368 alanine transaminase
Probab=100.00 E-value=1.2e-55 Score=442.93 Aligned_cols=362 Identities=51% Similarity=0.871 Sum_probs=303.3
Q ss_pred CcccccccChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccc
Q 013892 54 PAITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDR 133 (434)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~ 133 (434)
+.++.+.+|+++.++++++++.+..+|.++++++ .+||+|++|+|++.||+|.+|.|||+++++++-.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g---------~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (407)
T PLN02368 4 KALDYESLNENVKKCQYAVRGELYLRASELQKEG---------KKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDD 74 (407)
T ss_pred CCCChhhcCHHHHhhhhhcCCHHHHHHHHHHHHh---------hhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCC
Confidence 4478889999999999999999999999998873 5899999999999999999999999999998755443
Q ss_pred cccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC
Q 013892 134 SETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS 213 (434)
Q Consensus 134 ~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~ 213 (434)
......+|++.++++.+.+..... ....|++..|.++||++||+|+.+++|+.+++++|++|+|+++++..++.+++.+
T Consensus 75 p~~~~~~p~~~i~~a~~~l~~~~~-~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~ 153 (407)
T PLN02368 75 PNVGLLFPADAIARAKHYLSLTSG-GLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRG 153 (407)
T ss_pred ccccccCCHHHHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCC
Confidence 222223577777777666532211 3678999999999999999999998899999999999999999999999988635
Q ss_pred CCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHH
Q 013892 214 ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (434)
Q Consensus 214 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~ 293 (434)
+||+|++++|+|+.|...++..|++++.++++++++|++|++.|++++++...++.++|+++++|||||||.+++.++++
T Consensus 154 pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~ 233 (407)
T PLN02368 154 EKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLR 233 (407)
T ss_pred CCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHH
Confidence 89999999999999999999999999999998888899999999999986544444689999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCC-CCceEEEEecCCCCCCCCCCceeEEEEEecCCHHH
Q 013892 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE-KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (434)
Q Consensus 294 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~-~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~ 372 (434)
+|+++|++||++||+||+|.++.|++..++.++..+...++... .+.++|+++||||+|+|+||||+||+++.+.++++
T Consensus 234 ~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~l 313 (407)
T PLN02368 234 EILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKT 313 (407)
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHH
Confidence 99999999999999999999999976434667666544443211 13369999999999856999999999853348899
Q ss_pred HHHHHHHhhcccCCchHHHHHHHHHcCCCC--------CC---hHHHHHHHHHHHHHHHHHHHH
Q 013892 373 REQIYKVASVNLCSNISGQILASLVMSPPK--------VG---DESYESYCAERDGILSSLARR 425 (434)
Q Consensus 373 ~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~--------~~---~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++.+.+......+++.++|.++..++++++ +. +++.+.|+++|+.+.+.|++.
T Consensus 314 i~~~~~~~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~ 377 (407)
T PLN02368 314 VEEIYKVASIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC 377 (407)
T ss_pred HHHHHHHhcccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999988755556899999999999998653 11 235678888888888888865
No 5
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-50 Score=404.64 Aligned_cols=301 Identities=28% Similarity=0.464 Sum_probs=261.7
Q ss_pred ccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHH
Q 013892 68 CEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIER 147 (434)
Q Consensus 68 ~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~ 147 (434)
..+.....+...+.++.+.. . . .++|++++|+|++ ..|+.++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~---~---~-~~vi~l~iG~Pd~-----------------------------~~p~~i~~a 49 (393)
T COG0436 6 VLPSYTFAVLAEAKAAAELK---G---K-EDVIDLSIGEPDF-----------------------------PTPEHIIEA 49 (393)
T ss_pred cCcchhHHHHhHHHHHHHhc---C---C-CCEEEeCCCCCCC-----------------------------CCCHHHHHH
Confidence 33444445556555555541 1 1 5799999999998 568899999
Q ss_pred HHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCC-EEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 013892 148 AWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND-IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP 226 (434)
Q Consensus 148 ~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~-i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~ 226 (434)
+.+++.+.. . .|.+.+|.++||++|++++.+++|..+++++ |++|+|+++++..++.+++ ++||+|++++|.|+
T Consensus 50 ~~~a~~~~~---~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~-~pGDeVlip~P~Y~ 124 (393)
T COG0436 50 AIEALEEGG---T-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALL-NPGDEVLIPDPGYP 124 (393)
T ss_pred HHHHHhccc---C-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhc-CCCCEEEEeCCCCc
Confidence 999888642 2 7889999999999999999999999999987 9999999999999999999 89999999999999
Q ss_pred hHHHHHHHcCCeEEEEecCCC-CCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 013892 227 LYSASIALHGGTLVPYYLDEA-TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLV 305 (434)
Q Consensus 227 ~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~ 305 (434)
.|...++.+|++++.++++.+ ++|.+|++.|++++++ ++|+|+|++||||||.+++++++++|+++|++||++
T Consensus 125 ~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~------ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ 198 (393)
T COG0436 125 SYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP------KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDII 198 (393)
T ss_pred CHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeE
Confidence 999999999999999998765 4899999999999998 899999999999999999999999999999999999
Q ss_pred EEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC-HHHHHHHHHHhh-cc
Q 013892 306 LLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-AEVREQIYKVAS-VN 383 (434)
Q Consensus 306 li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~-~~~~~~l~~~~~-~~ 383 (434)
||+||+|.+++|++. .+.++...... ..++|+++||||+| +|+|||+||+++ + +++++.+.+++. ..
T Consensus 199 ii~DEiY~~l~yd~~-~~~s~~~~~~~------~~~~i~i~s~SK~~-~mtGwRvG~~v~---~~~~l~~~~~~~~~~~~ 267 (393)
T COG0436 199 IISDEIYEELVYDGA-EHPSILELAGA------RDRTITINSFSKTY-GMTGWRIGWVVG---PPEELIAALRKLKSYLT 267 (393)
T ss_pred EEEehhhhhcccCCC-CcCCHhhcCCC------cceEEEEecccccc-cccccceeEeec---ChHHHHHHHHHHHHhcc
Confidence 999999999999984 26666544321 12689999999999 899999999987 6 899999998877 77
Q ss_pred cCCchHHHHHHHHHcCCCC---CChHHHHHHHHHHHHHHHHHHHHH
Q 013892 384 LCSNISGQILASLVMSPPK---VGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 384 ~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.|++.+.|.++..+|+.++ ..+..++.|+++|+.+.+.|.+..
T Consensus 268 ~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~ 313 (393)
T COG0436 268 SCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIG 313 (393)
T ss_pred cCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7999999999999999873 456777899999999999999764
No 6
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-46 Score=353.72 Aligned_cols=302 Identities=23% Similarity=0.328 Sum_probs=256.8
Q ss_pred ChhhhcccccccchhHHHHHHHHHHHhcCCCCCCccccee-ccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCC
Q 013892 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILY-CNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (434)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~-~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (434)
++++...++.++.++..+|.|. ++++ |++|.|++ ..
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e~--------------~~~~~LgqGfp~~-----------------------------~~ 45 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAEH--------------KVPNPLGQGFPDF-----------------------------PP 45 (420)
T ss_pred cccccccCCcHHHHHHHHHHhc--------------CCCCcccCCCCCC-----------------------------CC
Confidence 3455666667877777776653 3444 99999998 45
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGIL 219 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vl 219 (434)
|.-+.+++.+++++. ..++|.+..|+++|++++++.++..+|...+++ +|++|.|+.++|...+..++ ++||+|+
T Consensus 46 P~fv~ea~~~~~~~~---~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~-~~GDeVi 121 (420)
T KOG0257|consen 46 PKFVTEAAKNAAKEP---STNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLL-NPGDEVI 121 (420)
T ss_pred cHHHHHHHHHHhccc---hhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHc-CCCCEEE
Confidence 778888888888764 388999999999999999999999888776665 69999999999999999999 8999999
Q ss_pred EcCCCChhHHHHHHHcCCeEEEEecC------CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHH
Q 013892 220 CPIPQYPLYSASIALHGGTLVPYYLD------EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (434)
Q Consensus 220 v~~p~y~~~~~~~~~~g~~~~~~~~~------~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~ 293 (434)
+.+|.|+.|...++.+|++++.+++. ...+|.+|.++|+.++++ ++|+|++|+||||||.++++++|+
T Consensus 122 i~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~------kTk~Ii~ntPhNPtGkvfsReeLe 195 (420)
T KOG0257|consen 122 VFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE------KTKAIILNTPHNPTGKVFSREELE 195 (420)
T ss_pred EecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccC------CccEEEEeCCCCCcCcccCHHHHH
Confidence 99999999999999999999999988 556899999999999998 899999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHH
Q 013892 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (434)
Q Consensus 294 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 373 (434)
+|+++|++||+++|.||+|..++|++.+ +.++..+ ++|.+ ++|.++|+||+| |++|||+||++. ++.+.
T Consensus 196 ~ia~l~~k~~~lvisDevYe~~v~d~~~-h~r~asl-Pgm~e-----rtitvgS~gKtf-~~TGWrlGW~ig---p~~L~ 264 (420)
T KOG0257|consen 196 RIAELCKKHGLLVISDEVYEWLVYDGNK-HIRIASL-PGMYE-----RTITVGSFGKTF-GVTGWRLGWAIG---PKHLY 264 (420)
T ss_pred HHHHHHHHCCEEEEEhhHhHHHhhCCCc-ceeeecC-Cchhh-----eEEEecccccee-eeeeeeeeeeec---hHHhh
Confidence 9999999999999999999999999863 6666555 55553 689999999999 899999999976 99999
Q ss_pred HHHHHHhh-cccCCchHHHHHHHHHcCCCC--------C-ChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 374 EQIYKVAS-VNLCSNISGQILASLVMSPPK--------V-GDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 374 ~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~--------~-~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
..+..++. .....++..|.+...++..+. + ..++...|+++|+.|.+.|.+...
T Consensus 265 ~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~ 328 (420)
T KOG0257|consen 265 SALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGL 328 (420)
T ss_pred hhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99988876 444556666666655555432 2 345888999999999999998743
No 7
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=7.2e-45 Score=377.39 Aligned_cols=309 Identities=28% Similarity=0.467 Sum_probs=256.3
Q ss_pred ccChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCC
Q 013892 60 SLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGL 139 (434)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~ 139 (434)
.+++++.++.+.+++.+...+.+++++ | +++|+|++|+|...+. .
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---g------~~~i~l~~G~p~~~~~--------------------------~ 162 (517)
T PRK13355 118 KKSHKLDNVLYDVRGPVVDEANRMEAA---G------THILKLNIGNPAPFGF--------------------------R 162 (517)
T ss_pred ChhHHhhccCccHHHHHHHHHHHHHHc---C------CCeEEecCcCCCcCCC--------------------------C
Confidence 378999999999999998999888655 2 5799999999974322 3
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEE
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vl 219 (434)
.|+.+++++.+.+.. ...|++..|.++||++||+++.++++..+++++|++|+|+++++.+++.+++ ++||+|+
T Consensus 163 ~p~~~~~~~~~~~~~-----~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~-~~Gd~Vl 236 (517)
T PRK13355 163 TPDEVVYDMAQQLTD-----TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALL-DDGDEVL 236 (517)
T ss_pred CCHHHHHHHHHHhhc-----CCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhC-CCCCEEE
Confidence 478888888877653 4579999999999999999998877767899999999999999999999998 7999999
Q ss_pred EcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHH
Q 013892 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 220 v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~ 299 (434)
++.|+|+.|...++..|++++.++++++++|.+|+++|++++++ ++++|+++|||||||.+++.+++++|+++|
T Consensus 237 i~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a 310 (517)
T PRK13355 237 IPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITS------RTKAIVIINPNNPTGALYPREVLQQIVDIA 310 (517)
T ss_pred EcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHH
Confidence 99999999999999999999999998888899999999998876 799999999999999999999999999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH----HHHH
Q 013892 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE----VREQ 375 (434)
Q Consensus 300 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~----~~~~ 375 (434)
++||++||+||+|.+++|++. ++.++.... +++.+|+++||||.| +++|+|+||+++.+ +++ +++.
T Consensus 311 ~~~~~~ii~DE~Y~~~~~~~~-~~~s~~~~~-------~~~~vi~~~S~SK~~-~~~G~RiG~~i~~~-~~~~~~~~~~~ 380 (517)
T PRK13355 311 REHQLIIFSDEIYDRLVMDGL-EHTSIASLA-------PDLFCVTFSGLSKSH-MIAGYRIGWMILSG-NKRIAKDYIEG 380 (517)
T ss_pred HHcCcEEEEehhhhhhcCCCC-CcccHHHhC-------CCCeEEEEecchhhc-cCcccceEEEEeeC-chhhHHHHHHH
Confidence 999999999999999998764 255554331 455688899999999 89999999998633 444 4445
Q ss_pred HHHHhhcccCCchHHHHHHHHHcCCCCCChHH---HHHHHHHHHHHHHHHHHH
Q 013892 376 IYKVASVNLCSNISGQILASLVMSPPKVGDES---YESYCAERDGILSSLARR 425 (434)
Q Consensus 376 l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~---~~~~~~~r~~l~~~L~~~ 425 (434)
+........+++.++|.++..+|.+.....+. ...+.++|+.+.+.|++.
T Consensus 381 l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 433 (517)
T PRK13355 381 LNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAI 433 (517)
T ss_pred HHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 54444455688999999999999754222222 234556688888888764
No 8
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.9e-44 Score=363.14 Aligned_cols=309 Identities=22% Similarity=0.306 Sum_probs=252.5
Q ss_pred hhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCH
Q 013892 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (434)
Q Consensus 63 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~ 142 (434)
+++.+++..+...+...+.++.+. ..+++|++++|+|.+ .+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~l~~~~p~~-----------------------------~~~~ 45 (396)
T PRK09147 3 PRLDRLQPYPFEKLRALFAGVTPP--------ADLPPISLSIGEPKH-----------------------------PTPA 45 (396)
T ss_pred chhhcCCcchHHHHHHHHHhhhhc--------cCCCeEecCCCCCCC-----------------------------CCCH
Confidence 445556655555555555554221 126899999999986 3466
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCC-CCCC-CEEEcCChHHHHHHHHHHHhcCC---CCE
Q 013892 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP-ADPN-DIFLTDGASPAVHMMMQLLIRSE---NDG 217 (434)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~-~~~~-~i~~t~G~~~al~~~l~~l~~~~---gd~ 217 (434)
.+.+++.+.+.. ...|++..|.++||+++|+++.+++|++ ++++ +|++|+|+++++..++++++ ++ ||.
T Consensus 46 ~~~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-~~~~~gd~ 119 (396)
T PRK09147 46 FIKDALAANLDG-----LASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVI-DRDGPGPL 119 (396)
T ss_pred HHHHHHHHHhhh-----hcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHc-CCCCCCCE
Confidence 677777666542 5679999999999999999999988988 8885 89999999999999999998 78 899
Q ss_pred EEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
|+++.|+|+.|...++..|++++.+|++++++|++|++.+++.+.+ ++++|+++|||||||.+++.+++++|++
T Consensus 120 vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~------~~k~i~l~nP~NPTG~~~s~~~~~~l~~ 193 (396)
T PRK09147 120 VVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA------RTQLLFVCSPGNPTGAVLPLDDWKKLFA 193 (396)
T ss_pred EEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhh------ccEEEEEcCCCCCcCccCCHHHHHHHHH
Confidence 9999999999999999999999999998777899999999988865 7999999999999999999999999999
Q ss_pred HHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 298 ~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
+|++|+++||+||+|.++.|++..+..+.......++....+ ++|+++||||.| |++|+|+||+++ ++++++.+.
T Consensus 194 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vi~~~S~SK~~-~~~GlRiG~~~~---~~~l~~~~~ 268 (396)
T PRK09147 194 LSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFK-RLVVFHSLSKRS-NVPGLRSGFVAG---DAALLKKFL 268 (396)
T ss_pred HHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccc-cEEEEecccccc-CCccceeeeecC---CHHHHHHHH
Confidence 999999999999999999887632222222221122211112 589999999998 899999999986 899999998
Q ss_pred HHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 378 KVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 378 ~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+... ...+++.+.|.++...+.+.+++.+.++.|+++|+.+.+.|++.
T Consensus 269 ~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 317 (396)
T PRK09147 269 LYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV 317 (396)
T ss_pred HHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7765 44578889999877777766677888999999999999998764
No 9
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=9.4e-44 Score=357.72 Aligned_cols=309 Identities=20% Similarity=0.319 Sum_probs=254.4
Q ss_pred ChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCC
Q 013892 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (434)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (434)
|+++...+...+..+...+.++... ...+++++++|+|.. .+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~l~~~~p~~-----------------------------~~~ 43 (393)
T TIGR03538 1 NPNLSRLQPYPFEKLAALLAGVTPP--------ASKPPIALSIGEPKH-----------------------------PTP 43 (393)
T ss_pred CchhhhCCccHHHHHHHHHHhhhhh--------cCCCeEEecCCCCCC-----------------------------CCC
Confidence 3455566655666666666655332 125899999999986 346
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCC--CCCC-CEEEcCChHHHHHHHHHHHhcCCCCE-
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP--ADPN-DIFLTDGASPAVHMMMQLLIRSENDG- 217 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~--~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~- 217 (434)
+.+.+++.+.+.. ...|++..|.++||+++|+|+.+++|++ ++++ +|++|+|+++++..++++++ ++||.
T Consensus 44 ~~~~~a~~~~~~~-----~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~-~~gd~~ 117 (393)
T TIGR03538 44 AFVLEALRENLHG-----LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVI-NPGQAP 117 (393)
T ss_pred HHHHHHHHHHhhc-----cCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHc-CCCCcc
Confidence 7778877776542 5679999999999999999999988876 7885 79999999999999999998 79986
Q ss_pred -EEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHH
Q 013892 218 -ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (434)
Q Consensus 218 -Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 296 (434)
|+++.|+|+.|...++..|++++.++++++++|.+|++++++++.+ ++|+|+++|||||||.+++.+++++|+
T Consensus 118 ~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~p~NPtG~~~s~~~~~~l~ 191 (393)
T TIGR03538 118 LVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR------RCQLLFVCSPGNPTGAVLSLDTLKKLI 191 (393)
T ss_pred eEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh------cceEEEEeCCCCCcCcccCHHHHHHHH
Confidence 9999999999999999999999999998777899999999998876 789999999999999999999999999
Q ss_pred HHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC-CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHH
Q 013892 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY-GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (434)
Q Consensus 297 ~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~-~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 375 (434)
++|+++|++||+||+|.++.|++..++.+.......++. .++ ++|+++||||.| +++|+|+||+++ ++++++.
T Consensus 192 ~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~vi~i~S~SK~~-~~~GlRvG~~i~---~~~l~~~ 265 (393)
T TIGR03538 192 ELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFR--RCLVFHSLSKRS-NLPGLRSGFVAG---DAEILKA 265 (393)
T ss_pred HHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccc--cEEEEecchhhc-CCcccceEEEec---CHHHHHH
Confidence 999999999999999999888642223333322222211 112 589999999998 899999999987 8999999
Q ss_pred HHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 376 IYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 376 l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.++.. ...+++.+.|.++...+.+.+++++.++.|+++++.+.+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ 316 (393)
T TIGR03538 266 FLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV 316 (393)
T ss_pred HHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 988776 45578889999988888776677888999999999999999865
No 10
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=4e-44 Score=359.87 Aligned_cols=306 Identities=20% Similarity=0.264 Sum_probs=246.6
Q ss_pred ChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCC
Q 013892 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (434)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (434)
++++..++..++..+...+++.+++ | .++|++++|+|.. .+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~i~l~~~~~~~-----------------------------~~~ 45 (388)
T PRK07366 4 AQRLQPLQSNVFADMDRAKAQARAA---G------KELIDLSLGSSDL-----------------------------PAP 45 (388)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHhc---C------CCeEEeCCCCCCC-----------------------------CCC
Confidence 3445555555544443434444333 1 4689999999876 346
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
+.+.+++.+.+... ....|++..|.++||+++|+|+.+++|++++++ +|++|+|+++++.+++++++ ++||+|++
T Consensus 46 ~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~-~~gd~Vlv 121 (388)
T PRK07366 46 AHALEAIAQSLHDP---STHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVL-NPGDFALL 121 (388)
T ss_pred HHHHHHHHHHHhCc---ccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhC-CCCCEEEE
Confidence 77888887776542 256799999999999999999999899999998 69999999999999999998 79999999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
++|+|+.|...++..|++++.++++++++|.+|++++++.+.. ++++|+++|||||||.+++.+++++|+++|+
T Consensus 122 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~ 195 (388)
T PRK07366 122 LDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA------QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQ 195 (388)
T ss_pred cCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc------cceEEEEeCCCCCCCccCCHHHHHHHHHHHH
Confidence 9999999999999999999999998777889999999887765 6899999999999999999999999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh
Q 013892 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (434)
Q Consensus 301 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 380 (434)
++|++||+||+|.++.|++..+..++... +.. ..++|+++||||.| |+||+|+||+++ ++++++.+.+..
T Consensus 196 ~~~~~ii~De~Y~~~~~~~~~~~~~~~~~----~~~--~~~vi~~~SfSK~~-g~~GlRiG~~v~---~~~li~~l~~~~ 265 (388)
T PRK07366 196 QHDLVLVHDFPYVDLVFDGEVEPPSILQA----DPE--KSVSIEFFTLSKSY-NMGGFRIGFAIG---NAQLIQALRQVK 265 (388)
T ss_pred HcCeEEEEecchhhcccCCCCCCCChhhC----CCC--cccEEEEeeccccc-CCcchhheehcC---CHHHHHHHHHHH
Confidence 99999999999999988754223334322 211 12479999999999 899999999986 999999998877
Q ss_pred h-cccCC-chHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 381 S-VNLCS-NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 381 ~-~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
. ...+. +.+.|.++..+.++.+++++.++.|+++|+.+.+.|+++
T Consensus 266 ~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~ 312 (388)
T PRK07366 266 AVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI 312 (388)
T ss_pred hhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 6 33344 334455555554445678889999999999999999875
No 11
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=3.1e-43 Score=355.47 Aligned_cols=298 Identities=20% Similarity=0.330 Sum_probs=252.1
Q ss_pred cChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCC
Q 013892 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (434)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (434)
++.++..+...++..+...+ .. .++|++++|+|+. .+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~----~~----------~~~i~l~~G~P~~-----------------------------~~ 68 (413)
T PLN00175 32 VAKRLEKFKTTIFTQMSSLA----IK----------HGAINLGQGFPNF-----------------------------DG 68 (413)
T ss_pred hhHHhhcCCCCHHHHHHHHh----hc----------CCeEecCCCCCCC-----------------------------CC
Confidence 45666666665544333332 11 3699999999986 34
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGIL 219 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vl 219 (434)
|+.+.+++.+.+.+ ....|++..|.++||+++++++.+++|++++++ +|++|+|+++++..++..++ ++||+|+
T Consensus 69 ~~~~~~~~~~~~~~----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~-~~gd~Vl 143 (413)
T PLN00175 69 PDFVKEAAIQAIRD----GKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLI-NPGDEVI 143 (413)
T ss_pred CHHHHHHHHHHHhc----CCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhC-CCCCEEE
Confidence 66677777777765 256899999999999999999999999999997 79999999999999999998 7999999
Q ss_pred EcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHH
Q 013892 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 220 v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~ 299 (434)
+++|+|+.|...++..|++++.+++++++ |.+|++.|++.+.+ ++++|+++|||||||.+++.+++++|+++|
T Consensus 144 v~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~l~~~~~~------~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a 216 (413)
T PLN00175 144 LFAPFYDSYEATLSMAGAKIKTVTLRPPD-FAVPEDELKAAFTS------KTRAILINTPHNPTGKMFTREELELIASLC 216 (413)
T ss_pred EeCCCchhHHHHHHHcCCEEEEEECCccc-CCCCHHHHHHhcCc------CceEEEecCCCCCCCcCCCHHHHHHHHHHH
Confidence 99999999999999999999999997653 89999999998876 789999999999999999999999999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH
Q 013892 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (434)
Q Consensus 300 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 379 (434)
++|+++||+||+|.++.|++. +.++..+ .... + ++|+++||||.| |+||+|+||+++ ++++++.+.+.
T Consensus 217 ~~~~~~ii~De~Y~~l~~~~~--~~s~~~~----~~~~-~-~vi~i~SfSK~~-~~~G~RiG~~v~---~~~l~~~l~~~ 284 (413)
T PLN00175 217 KENDVLAFTDEVYDKLAFEGD--HISMASL----PGMY-E-RTVTMNSLGKTF-SLTGWKIGWAIA---PPHLTWGVRQA 284 (413)
T ss_pred HHcCcEEEEecccCccccCCc--ccChhhC----CCCc-C-cEEEEecchhhc-cCcchheeeeEe---CHHHHHHHHHH
Confidence 999999999999999988653 4444332 1111 2 589999999999 899999999987 89999999887
Q ss_pred hh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 380 AS-VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 380 ~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.. ...+++.+.|.++..+|+++ .++++.++.|+++|+.+.+.|++.
T Consensus 285 ~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (413)
T PLN00175 285 HSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV 332 (413)
T ss_pred HhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 76 56789999999999999765 457888999999999999999875
No 12
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-43 Score=355.54 Aligned_cols=304 Identities=18% Similarity=0.258 Sum_probs=252.1
Q ss_pred ChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCC
Q 013892 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (434)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (434)
++++.......+..+...+.+.+.. ..++|++++|+|+. .+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~l~~g~p~~-----------------------------~~~ 47 (399)
T PRK07681 6 ATRMKAFQSSIFSELGAYKKEKIAA---------GHKMIDLSIGNPDM-----------------------------PPA 47 (399)
T ss_pred hHHHhhcCccHHHHHHHHHHHhhhc---------CCCeEEeCCCCCCC-----------------------------CCC
Confidence 4556555666555555555554332 15799999999985 345
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
+.+.+++.+.+... ....|+ ..|.++||++||+|+.+++|+++++ ++|++|+|+++++.+++.+++ ++||.|++
T Consensus 48 ~~~~~~~~~~~~~~---~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~-~~Gd~Vlv 122 (399)
T PRK07681 48 DFVREEMVHTANQK---ESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYA-NPGDIILV 122 (399)
T ss_pred HHHHHHHHHHHhcc---ccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhC-CCCCEEEE
Confidence 66777777766542 245565 4799999999999999999999998 899999999999999999998 79999999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
++|+|+.|...++..|+++++++++++++|.+|++++++++.+ ++++|+++|||||||.+++.+++++|+++|+
T Consensus 123 ~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~ 196 (399)
T PRK07681 123 PDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIAD------KAKMMILNFPGNPVPAMAHEDFFKEVIAFAK 196 (399)
T ss_pred CCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999998877899999999998865 7899999999999999999999999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh
Q 013892 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (434)
Q Consensus 301 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 380 (434)
++|++||+||+|.++.|++.. +.++..+ .. ..+ ++|+++||||.| |++|+|+||+++ ++++++.+.+..
T Consensus 197 ~~~~~iI~De~y~~~~~~~~~-~~~~~~~----~~-~~~-~~i~~~S~SK~~-~~~GlRiG~~i~---~~~l~~~~~~~~ 265 (399)
T PRK07681 197 KHNIIVVHDFAYAEFYFDGNK-PISFLSV----PG-AKE-VGVEINSLSKSY-SLAGSRIGYMIG---NEEIVRALTQFK 265 (399)
T ss_pred HcCeEEEEeccchhheeCCCC-CCChhhC----CC-Ccc-cEEEEeeccccc-CCccceeEEEec---CHHHHHHHHHHH
Confidence 999999999999999887542 3444332 11 122 489999999999 899999999987 899999998877
Q ss_pred h-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 381 S-VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 381 ~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
. ...+++.+.|.++..++++. +++++.++.++++++.+.+.|++.
T Consensus 266 ~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (399)
T PRK07681 266 SNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF 312 (399)
T ss_pred hhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 6 45688999999999999874 566778889999999999999875
No 13
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-43 Score=351.57 Aligned_cols=300 Identities=21% Similarity=0.301 Sum_probs=256.4
Q ss_pred ChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCC
Q 013892 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (434)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (434)
++++.++.+....++..++.+.+.. .+++++++.|+|.+ .+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~l~~g~~~~-----------------------------~~~ 47 (387)
T PRK08960 6 SRRSRDIEPFHVMALLARANELEAA---------GHDVIHLEIGEPDF-----------------------------TTA 47 (387)
T ss_pred hhHHHhCCchHHHHHHHHHHHHHhc---------CCCeEEeCCCCCCC-----------------------------CCC
Confidence 3456666666777777777665443 14789999999986 357
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEc
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~ 221 (434)
+.+.+++.+.+... ...|.+..|.+++|+++|+++.+++|+++++++|++|+|+++++..++..++ ++||+|+++
T Consensus 48 ~~v~~a~~~~~~~~----~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vlv~ 122 (387)
T PRK08960 48 EPIVAAGQAALAAG----HTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLV-DPGKHWLLA 122 (387)
T ss_pred HHHHHHHHHHHhcC----CCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhc-CCCCEEEEc
Confidence 88888888887642 4579999999999999999999999999999999999999999999999998 799999999
Q ss_pred CCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH
Q 013892 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 222 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
+|+|+.+...++..|++++.++++++++|.+|++.+++.+++ +++++++++||||||.+++.+++++|+++|++
T Consensus 123 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~ 196 (387)
T PRK08960 123 DPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNA------DTVGALVASPANPTGTLLSRDELAALSQALRA 196 (387)
T ss_pred CCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHH
Confidence 999999999999999999999998777899999999998876 68899999999999999999999999999999
Q ss_pred cCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh
Q 013892 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (434)
Q Consensus 302 ~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 381 (434)
+|+++|+||+|.++.|++. ..++.. +. + ++|+++||||.| |++|+|+||+++ ++++++.+.++..
T Consensus 197 ~~~~li~De~Y~~~~~~~~--~~~~~~----~~---~--~vi~~~S~SK~~-g~~GlRiG~~~~---~~~~~~~~~~~~~ 261 (387)
T PRK08960 197 RGGHLVVDEIYHGLTYGVD--AASVLE----VD---D--DAFVLNSFSKYF-GMTGWRLGWLVA---PPAAVPELEKLAQ 261 (387)
T ss_pred cCCEEEEEccccccccCCC--CCChhh----cc---C--CEEEEeeccccc-CCcccEEEEEEc---CHHHHHHHHHHHh
Confidence 9999999999999888643 333322 11 2 489999999999 899999999987 8999999988776
Q ss_pred -cccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 382 -VNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 382 -~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
...+++.+.|.++..++.+. +++.+.++.|+++|+.+.+.|+++
T Consensus 262 ~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 308 (387)
T PRK08960 262 NLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL 308 (387)
T ss_pred hhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56678999999988888753 456778889999999999999875
No 14
>PLN02187 rooty/superroot1
Probab=100.00 E-value=5.9e-43 Score=357.42 Aligned_cols=286 Identities=20% Similarity=0.324 Sum_probs=240.2
Q ss_pred CcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHH
Q 013892 95 SFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRD 174 (434)
Q Consensus 95 p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~ 174 (434)
+.+++|++++|+|+..+. ...|+++.+++.+.+... ....|++..|.+++|+
T Consensus 64 ~~~~vi~l~~Gdp~~~p~-------------------------~~~~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lR~ 115 (462)
T PLN02187 64 VNKTILPLGHGDPSVYPC-------------------------FRTCIEAEDAVVDVLRSG---KGNSYGPGAGILPARR 115 (462)
T ss_pred CCCCeEECCCCCCCCCCC-------------------------CCCCHHHHHHHHHHHhCC---CCCCCCCCCChHHHHH
Confidence 347899999999996221 134677888888877653 2568999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCH
Q 013892 175 TIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLET 254 (434)
Q Consensus 175 ~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (434)
++|+|+.+++|.++++++|++|+|++++|.+++.+++ ++||.|++++|+|+.|...++..|++++.+++.++++|++|+
T Consensus 116 aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~ 194 (462)
T PLN02187 116 AVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLA-RPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDL 194 (462)
T ss_pred HHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhc-CCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCH
Confidence 9999999988999999999999999999999999998 799999999999999999999999999999997767899999
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhC
Q 013892 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~ 334 (434)
++|++++++ ++++++++|||||||.+++.+++++|+++|+++|++||+||+|.+++|++. ++.++..+ .
T Consensus 195 ~~l~~~~~~------~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~-~~~s~~~~----~ 263 (462)
T PLN02187 195 EGIEAIADE------NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN-PFVSMGKF----A 263 (462)
T ss_pred HHHHHhcCC------CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CceeHHHh----c
Confidence 999988866 789999999999999999999999999999999999999999999999764 34455432 2
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH---HHHHHHHHhh---cccCCchHHHHHHHHHcCC--CCCChH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE---VREQIYKVAS---VNLCSNISGQILASLVMSP--PKVGDE 406 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~---~~~~l~~~~~---~~~~~~~~~q~~~~~~l~~--~~~~~~ 406 (434)
.+.++|+++||||.| ++||+|+||+++.. ++. +++.+..... ...+++.+.|.++..++++ .+++++
T Consensus 264 ---~~~~vi~l~SfSK~f-~~pGlRiG~~v~~~-p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~ 338 (462)
T PLN02187 264 ---SIVPVLTLAGISKGW-VVPGWKIGWIALND-PEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAK 338 (462)
T ss_pred ---cCCcEEEEecchhhc-CCccceeEEEEecC-chhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHH
Confidence 123589999999999 89999999997621 233 3345555544 2235689999999999974 356788
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 013892 407 SYESYCAERDGILSSLARR 425 (434)
Q Consensus 407 ~~~~~~~~r~~l~~~L~~~ 425 (434)
.++.++++|+.+.+.|++.
T Consensus 339 ~~~~l~~~r~~l~~~L~~~ 357 (462)
T PLN02187 339 KNKILKHNVDLVCDRLKDI 357 (462)
T ss_pred HHHHHHHHHHHHHHHHhhC
Confidence 8899999999999999875
No 15
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.5e-43 Score=352.05 Aligned_cols=279 Identities=22% Similarity=0.326 Sum_probs=240.3
Q ss_pred CcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHH
Q 013892 95 SFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRD 174 (434)
Q Consensus 95 p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~ 174 (434)
|.+++|++++|+|.. ..|+.+++++.+.+... ....|++ .|.++||+
T Consensus 42 ~~~~~i~L~~g~p~~-----------------------------~~~~~~~~~l~~~~~~~---~~~~Y~~-~G~~~lr~ 88 (410)
T PRK06290 42 PDMELIDMGVGEPDE-----------------------------MADESVVEVLCEEAKKP---ENRGYAD-NGIQEFKE 88 (410)
T ss_pred CCCCeEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHhCC---CCCCCCC-CCcHHHHH
Confidence 446899999999986 34666777776665432 2456875 89999999
Q ss_pred HHHHHHHhhcCCC-CCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCC
Q 013892 175 TIAAGIEARDGFP-ADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGL 252 (434)
Q Consensus 175 ~ia~~~~~~~g~~-~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 252 (434)
++|+|+.+++|+. ++++ +|++|+|+++++..++++++ ++||.|+++.|+|+.|...++..|++++.++++++++|.+
T Consensus 89 aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~ 167 (410)
T PRK06290 89 AAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFI-NPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLP 167 (410)
T ss_pred HHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhC-CCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcC
Confidence 9999999988987 8887 79999999999999999998 7999999999999999999999999999999998878999
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhh
Q 013892 253 ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRS 332 (434)
Q Consensus 253 d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~ 332 (434)
|++++++++.+ ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. +.++...
T Consensus 168 d~~~l~~~~~~------~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~--~~s~~~~--- 236 (410)
T PRK06290 168 DLDSIPKDIKE------KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK--PLSFLSV--- 236 (410)
T ss_pred CHHHHHHhhcc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC--CcChhcC---
Confidence 99999988865 789999999999999999999999999999999999999999999988653 3344332
Q ss_pred hCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHH
Q 013892 333 MGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESY 411 (434)
Q Consensus 333 l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 411 (434)
.. ..+ ++|+++||||.| |+||+|+||+++ ++++++.+.+... ...+++.+.|.++..+++++++.++.++.|
T Consensus 237 -~~-~~~-~~I~i~SfSK~~-g~~GlRiG~ii~---~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~ 309 (410)
T PRK06290 237 -PG-AKE-VGVEIHSLSKAY-NMTGWRLAFVVG---NELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKY 309 (410)
T ss_pred -CC-ccc-cEEEEeechhhc-CCchhheEeEEe---CHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHH
Confidence 11 123 479999999999 899999999987 9999999988776 455677889999999998877777889999
Q ss_pred HHHHHHHHHHHHHH
Q 013892 412 CAERDGILSSLARR 425 (434)
Q Consensus 412 ~~~r~~l~~~L~~~ 425 (434)
+++|+.+.+.|++.
T Consensus 310 ~~~~~~l~~~L~~~ 323 (410)
T PRK06290 310 SRRLDKLVKILNEV 323 (410)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999875
No 16
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1e-42 Score=353.12 Aligned_cols=303 Identities=20% Similarity=0.314 Sum_probs=248.3
Q ss_pred cccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHH
Q 013892 71 AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQ 150 (434)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~ 150 (434)
.+++.+...+.++... . +.+++|++++|+|+..+.. ..|+++.+++.+
T Consensus 33 ~~~~~~~~~~~~~~~~----~---~~~~~i~l~~G~P~~~~~~-------------------------~~~~~~~~a~~~ 80 (430)
T PLN00145 33 SIRAVLNRVKACVDAG----G---GPRPVLPLGHGDPSAFPCF-------------------------RTAPEAEDAVAA 80 (430)
T ss_pred chhhHHHHHHHhhhcc----c---CCCCeeeCCCCCCCCCCCC-------------------------CCCHHHHHHHHH
Confidence 4555555555554422 1 1268999999999863321 347788888888
Q ss_pred HHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH
Q 013892 151 ILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA 230 (434)
Q Consensus 151 ~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~ 230 (434)
.+... ....|++..|.+++|+++++++.+++|.++++++|++|+|+++++.++++.++ ++||+|+++.|+|+.|..
T Consensus 81 al~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~-~~Gd~Vlv~~P~y~~y~~ 156 (430)
T PLN00145 81 ALRSG---KYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLA-QPGANILLPRPGYPLYEA 156 (430)
T ss_pred HHHcC---cCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCccHHH
Confidence 88753 25589999999999999999999989999999999999999999999999998 799999999999999999
Q ss_pred HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 013892 231 SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (434)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 310 (434)
.+...|++++.+++..+++|.+|++.|++.+++ ++++++++|||||||.+++.+++++|+++|+++|++||+||
T Consensus 157 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De 230 (430)
T PLN00145 157 RAVFSGLEVRHFDLLPERGWEVDLEGVEALADE------NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADE 230 (430)
T ss_pred HHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc------CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 999999999999987777899999999998876 78999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHH------HHHHHHhhccc
Q 013892 311 VYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR------EQIYKVASVNL 384 (434)
Q Consensus 311 ay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~------~~l~~~~~~~~ 384 (434)
+|.+++|++. ++.++..+ . ...++|+++||||.| ++||||+||+++.. ++.++ +.+........
T Consensus 231 ~Y~~~~~~~~-~~~~~~~~----~---~~~~vi~~~S~SK~~-~~pG~RlG~iv~~~-~~~~~~~~~~~~~~~~~~~~~~ 300 (430)
T PLN00145 231 VYDHLTFGSK-PFVPMGVF----G---EVAPVLTLGSISKRW-VVPGWRLGWIATCD-PNGILKETKVVDSIRNYLNIST 300 (430)
T ss_pred cchhhccCCC-Cccchhhh----c---ccCcEEEEecccccc-CCCCeeEEEEEEec-chhhhhhhHHHHHHHHHhcccC
Confidence 9999998763 34554332 2 123689999999999 89999999998633 34333 34444444555
Q ss_pred CCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 385 CSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 385 ~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++.+.|.++..+|+.. ++.++.++.++++|+.+.+.|++.
T Consensus 301 ~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 343 (430)
T PLN00145 301 DPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEI 343 (430)
T ss_pred CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 78899999999999752 457788889999999999988764
No 17
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.2e-42 Score=349.16 Aligned_cols=305 Identities=20% Similarity=0.236 Sum_probs=246.8
Q ss_pred hhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCH
Q 013892 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (434)
Q Consensus 63 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~ 142 (434)
+++.+.....+..+...+.+.... + +++|+++.|+|.. ..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~i~l~~~~p~~-----------------------------~~~~ 48 (389)
T PRK08068 7 ELLKQLPKQFFASLVAKVNKKVAE---G------HDVINLGQGNPDQ-----------------------------PTPE 48 (389)
T ss_pred hHhhhcCccHHHHHHHHHHHHHhc---C------CCeEEecCCCCCC-----------------------------CCCH
Confidence 445555555555555544433221 1 4689999999986 2356
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEc
Q 013892 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (434)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~ 221 (434)
.+.+++.+.+... ....|++..|.++||+++|+|+.+++|.+++++ +|++|+|+++++..++..++ ++||+|+++
T Consensus 49 ~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~-~~gd~vlv~ 124 (389)
T PRK08068 49 HIVEALQEAAENP---ANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLM-NPGDTILVP 124 (389)
T ss_pred HHHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhC-CCCCEEEEc
Confidence 6777777766542 256899999999999999999998889889998 89999999999999999998 799999999
Q ss_pred CCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH
Q 013892 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 222 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
+|+|+.|...++..|++++.++++++++|.+|++++++.+++ ++++|+++|||||||.+++.+++++|+++|++
T Consensus 125 ~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~ 198 (389)
T PRK08068 125 DPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAE------KAKLMYLNYPNNPTGAVATKAFFEETVAFAKK 198 (389)
T ss_pred CCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccc------cceEEEEECCCCCCCCcCCHHHHHHHHHHHHH
Confidence 999999999999999999999998777899999999998865 78999999999999999999999999999999
Q ss_pred cCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh
Q 013892 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (434)
Q Consensus 302 ~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 381 (434)
++++||+||+|.++.|++.. ..++.... + . .+ ++|+++||||.| |+||+|+||+++ ++++++.+.+...
T Consensus 199 ~~~~ii~Deay~~~~~~~~~-~~s~~~~~---~-~-~~-~~i~~~S~SK~~-g~~GlRiG~~~~---~~~l~~~l~~~~~ 267 (389)
T PRK08068 199 HNIGVVHDFAYGAIGFDGQK-PVSFLQTP---G-A-KD-VGIELYTLSKTF-NMAGWRVAFAVG---NESVIEAINLLQD 267 (389)
T ss_pred cCeEEEEehhhhhhccCCCC-CcChhhCC---C-c-cC-CEEEEecchhcc-CCccceeEeEec---CHHHHHHHHHHHh
Confidence 99999999999998886532 33332221 1 1 22 479999999999 899999999986 9999999988776
Q ss_pred -cccCCchHHHHHHHHHcC-CCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 382 -VNLCSNISGQILASLVMS-PPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 382 -~~~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
...+.+.+.|.++..++. +.+++++.++.|+++|+.+.+.|++..
T Consensus 268 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g 314 (389)
T PRK08068 268 HLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIG 314 (389)
T ss_pred hccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 334555556776666654 456677889999999999999998753
No 18
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-42 Score=349.58 Aligned_cols=308 Identities=23% Similarity=0.320 Sum_probs=249.7
Q ss_pred hhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHH
Q 013892 65 VLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADS 144 (434)
Q Consensus 65 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v 144 (434)
+.++.......+...+.++++. + .+++++++|+|+. ..|+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~l~~g~p~~-----------------------------~~~~~~ 51 (403)
T PRK08636 10 IKRLPKYVFAEVNELKMAARRA----G-----EDIIDFSMGNPDG-----------------------------PTPQHI 51 (403)
T ss_pred HHhCCccHHHHHHHHHHHHHhc----C-----CCEEEcCCcCCCC-----------------------------CCCHHH
Confidence 3344444555566666665543 1 4789999999986 236667
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC
Q 013892 145 IERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIP 223 (434)
Q Consensus 145 ~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p 223 (434)
++++.+.+... ....|++..|.++||+++|+|+.+++|+.++++ +|++|+|+++++.+++++++ ++||.|++++|
T Consensus 52 ~~~~~~~~~~~---~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P 127 (403)
T PRK08636 52 IDKLCESAQKP---KTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAIT-NPGDVAIVPDP 127 (403)
T ss_pred HHHHHHHhcCC---ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhC-CCCCEEEEcCC
Confidence 77776665432 267899999999999999999999999999998 79999999999999999999 79999999999
Q ss_pred CChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc-CCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc
Q 013892 224 QYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK-GITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (434)
Q Consensus 224 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~ 302 (434)
+|+.|...++..|+++++++++.+++|++|++.+.+.++++-++ ..++++++++|||||||.++|.+++++|+++|++|
T Consensus 128 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~ 207 (403)
T PRK08636 128 AYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKE 207 (403)
T ss_pred CCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc
Confidence 99999999999999999999875667899998776666544322 24789999999999999999999999999999999
Q ss_pred CCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-
Q 013892 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS- 381 (434)
Q Consensus 303 ~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~- 381 (434)
+++||+||+|.++.|++. ++.++..+ + ..++ .+|+++||||.| |+||+|+||+++ ++++++.+.+...
T Consensus 208 ~~~II~De~Y~~l~~~~~-~~~~~~~~----~-~~~~-~~i~~~S~SK~~-~~~GlRiG~iv~---~~~li~~~~~~~~~ 276 (403)
T PRK08636 208 RFYIISDIAYADITFDGY-KTPSILEV----E-GAKD-VAVESYTLSKSY-NMAGWRVGFVVG---NKKLVGALKKIKSW 276 (403)
T ss_pred CcEEEEeccchhhccCCC-CCCChhcC----C-Cccc-cEEEEEeccccc-CCccceeeeeeC---CHHHHHHHHHHHHH
Confidence 999999999999988653 23444332 2 1123 478899999999 899999999976 9999999988765
Q ss_pred cccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 382 VNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 382 ~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
...+++.+.|.++..+++. .+++++.++.|+++|+.+.+.|++.
T Consensus 277 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (403)
T PRK08636 277 LDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA 321 (403)
T ss_pred hcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 3457778888888877764 3556778889999999999998874
No 19
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.5e-42 Score=352.70 Aligned_cols=285 Identities=24% Similarity=0.380 Sum_probs=231.6
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.+++++++|+|+..+. .+|+.+.+++.+.+... ...+|++..|.++||+++
T Consensus 32 ~~~~~~~~G~p~~~~~--------------------------~~p~~~~~a~~~~~~~~---~~~~Y~~~~G~~~LReai 82 (433)
T PRK06855 32 VKITWENIGDPIAKGE--------------------------KIPDWMKEIVAELVMDD---KSYGYCPTKGVLETREFL 82 (433)
T ss_pred ccccccccCCCcccCC--------------------------CCCHHHHHHHHHHhhcC---CCCCCCCCCCCHHHHHHH
Confidence 5799999999964222 34666777777666542 367899999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH-HHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI-ALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
++|+.+++|+.+++++|++|+|+++++..++. ++ ++||.|++++|+|+.|.... ...|++++.++++++++|++|++
T Consensus 83 a~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~-~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~ 160 (433)
T PRK06855 83 AELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LL-RREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLD 160 (433)
T ss_pred HHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hc-CCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHH
Confidence 99999999999999999999999999999986 66 79999999999999987553 45699999999987778999999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+|+++++.. .++++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ++.++..+..
T Consensus 161 ~l~~~~~~~----~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~-~~~sl~~~~~---- 231 (433)
T PRK06855 161 DLENKVKYN----PSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK-KTVPLSEVIG---- 231 (433)
T ss_pred HHHHHHhcC----CCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCCCHHHHcC----
Confidence 999998631 1578999999999999999999999999999999999999999999998664 3556554422
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEec--CCH---HHHHHHHHHhhcccCCchHHHHHHHHHcCCC---CCChHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTG--FSA---EVREQIYKVASVNLCSNISGQILASLVMSPP---KVGDES 407 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~--~~~---~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~ 407 (434)
+.++|+++||||.| ++||+|+||+++.+ .++ .+++.+........+++.+.|.++..++++. +++++.
T Consensus 232 ---~~~~I~~~S~SK~~-~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~ 307 (433)
T PRK06855 232 ---DVPGIALKGISKEL-PWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKER 307 (433)
T ss_pred ---cCCeEEEecCcccc-CCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHH
Confidence 22469999999999 78999999998622 122 2333333333334578899999999999875 457788
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013892 408 YESYCAERDGILSSLARR 425 (434)
Q Consensus 408 ~~~~~~~r~~l~~~L~~~ 425 (434)
++.|+++++.+.+.|++.
T Consensus 308 ~~~~~~r~~~~~~~L~~~ 325 (433)
T PRK06855 308 NKRYEKRSNIAYEKLKDV 325 (433)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 999999999999999764
No 20
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-42 Score=348.25 Aligned_cols=277 Identities=18% Similarity=0.299 Sum_probs=237.7
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|+|+. .+++.+++++.+.+.. ....|++..|.++||+++
T Consensus 29 ~~~i~l~~g~p~~-----------------------------~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~i 75 (384)
T PRK06348 29 PDIIDLSLGDPDL-----------------------------ITDESIINAAFEDAKK----GHTRYTDSGGDVELIEEI 75 (384)
T ss_pred CCcEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHH
Confidence 3689999999986 2356677766555443 257899999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
++++.+++|+.+++++|++|+|+++++..++.+++ ++||+|++++|+|+.|...++..|++++.++++++++|.+|+++
T Consensus 76 a~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 154 (384)
T PRK06348 76 IKYYSKNYDLSFKRNEIMATVGACHGMYLALQSIL-DPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKK 154 (384)
T ss_pred HHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhc-CCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHH
Confidence 99999999999999999999999999999999998 79999999999999999999999999999998766678999999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
|++.+++ ++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++. +.++... ...
T Consensus 155 l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~----~~~ 222 (384)
T PRK06348 155 LEALITS------KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED--FVPMATL----AGM 222 (384)
T ss_pred HHHhhCc------CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC--ccchhhc----CCC
Confidence 9998875 789999999999999999999999999999999999999999999988653 3343322 111
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP-KVGDESYESYCAE 414 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~ 414 (434)
.+ ++|+++||||.| |+||+|+||+++ ++++++.+.++.. ...+++.+.|.++..++.+. ++.++.++.|+++
T Consensus 223 -~~-~vi~~~SfSK~~-~l~GlRiG~~v~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r 296 (384)
T PRK06348 223 -PE-RTITFGSFSKDF-AMTGWRIGYVIA---PDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKR 296 (384)
T ss_pred -cC-cEEEEecchhcc-CCccccceeeec---CHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 22 589999999999 899999999987 8999999988776 45678999999999888764 4466788889999
Q ss_pred HHHHHHHHHHH
Q 013892 415 RDGILSSLARR 425 (434)
Q Consensus 415 r~~l~~~L~~~ 425 (434)
++.+.+.|+++
T Consensus 297 ~~~~~~~L~~~ 307 (384)
T PRK06348 297 LEYAYKRIESI 307 (384)
T ss_pred HHHHHHHHhcC
Confidence 99999998764
No 21
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.5e-42 Score=347.91 Aligned_cols=279 Identities=23% Similarity=0.338 Sum_probs=239.2
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
++++++++|+|.. ..|+.+.+++.+.+... ....|++..|.++||+++
T Consensus 29 ~~~~~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~~i 76 (383)
T TIGR03540 29 VDVISLGIGDPDL-----------------------------PTPKHIVEALCKAAENP---ENHRYPSYEGMLAYRQAV 76 (383)
T ss_pred CCeEEeCCCCCCC-----------------------------CCCHHHHHHHHHHHhCC---CCCCCCCCCCCHHHHHHH
Confidence 5799999999986 34667788877776542 257899999999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
++|+.+++|.+++++ +|++|+|+++++..++..++ ++||.|++++|+|+.|...++..|++++.++++++++|.+|++
T Consensus 77 a~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~ 155 (383)
T TIGR03540 77 ADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFV-NPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFD 155 (383)
T ss_pred HHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhC-CCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHH
Confidence 999998889888887 69999999999999999998 7999999999999999999999999999999987777889999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
++++++.+ ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++.. ..++... ..
T Consensus 156 ~l~~~~~~------~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~-~~~~~~~----~~ 224 (383)
T TIGR03540 156 AIPEDIAK------KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYK-APSFLEV----DG 224 (383)
T ss_pred HHHhhccc------cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCC-CcCcccC----CC
Confidence 99998865 7999999999999999999999999999999999999999999999886532 3333322 11
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP-KVGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~ 413 (434)
. .+ ++|+++||||.| |++|+|+||+++ ++++++.+..... ...+++.+.|.++..++++. +++++.++.+++
T Consensus 225 ~-~~-~~i~~~SfSK~~-g~~GlRiG~~i~---~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 298 (383)
T TIGR03540 225 A-KD-VGIEFHSLSKTY-NMTGWRIGMAVG---NADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQR 298 (383)
T ss_pred c-cc-CEEEEEeccccc-CCccceeeEEeC---CHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 1 12 479999999999 899999999986 8999999988765 45577888899998888774 567788889999
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+|+.+.+.|++.
T Consensus 299 ~~~~~~~~L~~~ 310 (383)
T TIGR03540 299 RRDLLLEALKKI 310 (383)
T ss_pred HHHHHHHHHHhC
Confidence 999999999875
No 22
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.7e-42 Score=348.63 Aligned_cols=285 Identities=20% Similarity=0.300 Sum_probs=242.7
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|+|+.... ..+|+.+++++.+.+... ....|++..|.+++|+++
T Consensus 31 ~~~i~l~~G~p~~~~~-------------------------~~~~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~~i 82 (409)
T PLN02656 31 KRVISLGMGDPTAYSC-------------------------FHTTHVAQEAVVDALQSN---KFNGYAPTVGLPQARRAI 82 (409)
T ss_pred CeeeecCCCCCCcCCC-------------------------CCCCHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHH
Confidence 6899999999984211 135778888888877653 256899999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
++++.+.+|..+++++|++|+|+++++.+++.+++ ++||+|++++|+|+.|...++..|++++.++++++++|.+|++.
T Consensus 83 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~ 161 (409)
T PLN02656 83 AEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLA-RPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDA 161 (409)
T ss_pred HHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHh-CCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHH
Confidence 99999988999999999999999999999999998 79999999999999999999999999999999766688999999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++++++ ++++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ++.++..+ +
T Consensus 162 l~~~~~~------~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~----~-- 228 (409)
T PLN02656 162 VEALADQ------NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN-PFVPMGVF----G-- 228 (409)
T ss_pred HHHHhcc------CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC-CcccHHHh----c--
Confidence 9988866 789999999999999999999999999999999999999999999998764 24444322 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecC-----CHHHHHHHHHHhhcccCCchHHHHHHHHHcCCC--CCChHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGF-----SAEVREQIYKVASVNLCSNISGQILASLVMSPP--KVGDESYE 409 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~ 409 (434)
...++|+++||||.| ++||+|+||+++.+. ++++++.+.+......+++.+.|.++..++++. +++++.++
T Consensus 229 -~~~~vi~~~SfSK~f-~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~ 306 (409)
T PLN02656 229 -SIVPVLTLGSLSKRW-IVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTIN 306 (409)
T ss_pred -ccCcEEEEcccchhc-cCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 122589999999999 799999999986221 367888888776655578999999999999742 45778888
Q ss_pred HHHHHHHHHHHHHHHH
Q 013892 410 SYCAERDGILSSLARR 425 (434)
Q Consensus 410 ~~~~~r~~l~~~L~~~ 425 (434)
.++++|+.+.+.|+++
T Consensus 307 ~~~~~r~~~~~~L~~~ 322 (409)
T PLN02656 307 ILKQSSDICCDRIKEI 322 (409)
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999999874
No 23
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-42 Score=347.59 Aligned_cols=304 Identities=21% Similarity=0.306 Sum_probs=248.5
Q ss_pred hhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCH
Q 013892 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (434)
Q Consensus 63 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~ 142 (434)
+++.++.......+...+.+.++. | +++|++++|+|.. .+|.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~---g------~~~i~l~~g~p~~-----------------------------~~p~ 51 (394)
T PRK05942 10 DRLQALPPYVFARLDELKARAREQ---G------LDLIDLGMGNPDG-----------------------------AAPQ 51 (394)
T ss_pred hhhccCCCcHHHHHHHHHHHHHhc---C------CCeEEcCCCCCCC-----------------------------CCCH
Confidence 344444444444444444444332 1 4689999999986 2366
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCC-EEEcCChHHHHHHHHHHHhcCCCCEEEEc
Q 013892 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND-IFLTDGASPAVHMMMQLLIRSENDGILCP 221 (434)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~-i~~t~G~~~al~~~l~~l~~~~gd~Vlv~ 221 (434)
.+++++.+.+... ....|++..|.++||+++|+|+.+++|.++++++ |++|+|+++++..++..++ ++||+|+++
T Consensus 52 ~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~-~~gd~Vlv~ 127 (394)
T PRK05942 52 PVIEAAIAALADP---QNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYV-NPGDVVLVP 127 (394)
T ss_pred HHHHHHHHHHhCC---CCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhC-CCCCEEEEc
Confidence 6777776666532 2578999999999999999999998898889984 8999999999999999998 799999999
Q ss_pred CCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH
Q 013892 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 222 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
+|+|+.+...+...|++++.++++.+++|.+|++++++.+++ ++++|+++|||||||.+++.+++++|+++|++
T Consensus 128 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~ 201 (394)
T PRK05942 128 SPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ------QAKILYFNYPSNPTTATAPREFFEEIVAFARK 201 (394)
T ss_pred CCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccc------cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 999999999999999999999998777899999999998875 79999999999999999999999999999999
Q ss_pred cCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh
Q 013892 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (434)
Q Consensus 302 ~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 381 (434)
+|++||+||+|.++.|++.. ..++..+ . ...+ .+|+++||||.| |++|+|+||+++ ++++++.+.....
T Consensus 202 ~~~~iI~De~y~~~~~~~~~-~~~~~~~----~-~~~~-~~i~~~SfSK~~-~~~GlRiG~i~~---~~~l~~~l~~~~~ 270 (394)
T PRK05942 202 YEIMLVHDLCYAELAFDGYQ-PTSLLEI----P-GAKD-IGVEFHTLSKTY-NMAGWRVGFVVG---NRHIIQGLRTLKT 270 (394)
T ss_pred cCeEEEEeccchhhccCCCC-CCChhhC----C-Cccc-cEEEEecchhcc-CChhhheeeeec---CHHHHHHHHHHHh
Confidence 99999999999999886532 3333322 1 1123 468999999999 899999999987 8999999988765
Q ss_pred -cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 382 -VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 382 -~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
...+++.+.|.++..+++.. ++.++.++.++++++.+.+.|++.
T Consensus 271 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 316 (394)
T PRK05942 271 NLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL 316 (394)
T ss_pred hcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 45578889999999999753 456778888999999999988764
No 24
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-42 Score=347.23 Aligned_cols=299 Identities=21% Similarity=0.306 Sum_probs=250.1
Q ss_pred hhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHc
Q 013892 75 EIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQ 154 (434)
Q Consensus 75 ~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~ 154 (434)
++-+.|.-+++-++..| +| +++|++++|+|... .+|+.+.+++.+.+..
T Consensus 20 ~~~~~~~~~~~~~~~~~--~~-~~~i~l~~g~~~~~----------------------------~p~~~~~~~~~~~~~~ 68 (405)
T PRK06207 20 EVRQSAAGLEALLRGEP--LP-GRPVDFSHGDVDAH----------------------------EPTPGAFELFSAGVER 68 (405)
T ss_pred HHHhhhhhhhhhhcCCc--CC-CCceecCCcCCCCC----------------------------CCCHHHHHHHHHHHhc
Confidence 44555666666666554 24 67889999999841 2466788888877765
Q ss_pred CCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH
Q 013892 155 IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA 233 (434)
Q Consensus 155 ~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~ 233 (434)
. ....|++..|.++||++|++++.+.+|.++++ ++|++|+|+++++..++..++ ++||+|++++|+|+.|...++
T Consensus 69 ~---~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~-~~Gd~Vlv~~P~y~~~~~~~~ 144 (405)
T PRK06207 69 G---GVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATV-ARGDKVAIVQPDYFANRKLVE 144 (405)
T ss_pred C---CCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhHHHHHH
Confidence 3 25679999999999999999999999988888 899999999999999999998 799999999999999999999
Q ss_pred HcCCeEEEEecC---CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 013892 234 LHGGTLVPYYLD---EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (434)
Q Consensus 234 ~~g~~~~~~~~~---~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 310 (434)
..|++++.++++ .+++|++|+++|++++++ ++++|+++|||||||.+++.+++++|+++|+++|++||+||
T Consensus 145 ~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De 218 (405)
T PRK06207 145 FFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA------GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQ 218 (405)
T ss_pred HcCCEEEEEeccccCcccCCCcCHHHHHHhhhh------cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 999999999986 344689999999999876 68999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchH
Q 013892 311 VYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNIS 389 (434)
Q Consensus 311 ay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~ 389 (434)
+|.++.|++. ++.++..+ . ...+ ++|+++||||.| |++|+|+||+++ ++++++.+.+... ...+.+.+
T Consensus 219 ~Y~~~~~~~~-~~~~~~~~----~-~~~~-~vi~i~SfSK~~-~lpGlRiG~ii~---~~~l~~~~~~~~~~~~~~~~~~ 287 (405)
T PRK06207 219 LYSRLLYDGT-SYTHLRAL----P-IDPE-NVITIMGPSKTE-SLSGYRLGVAFG---SPAIIDRMEKLQAIVSLRAAGY 287 (405)
T ss_pred cccccccCCC-CCCchhcC----C-CCcC-cEEEEecchhhc-cCcccceEEEEc---CHHHHHHHHHHHhHhccCCCHH
Confidence 9999998764 23343322 1 1122 589999999999 899999999987 8999999988776 45577889
Q ss_pred HHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 390 GQILASLVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 390 ~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.|.++..++++. .++++.++.++++|+.+.+.|++.
T Consensus 288 ~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 324 (405)
T PRK06207 288 SQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGV 324 (405)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999764 456777888888888888888754
No 25
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-42 Score=346.51 Aligned_cols=304 Identities=23% Similarity=0.304 Sum_probs=251.5
Q ss_pred hhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCH
Q 013892 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (434)
Q Consensus 63 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~ 142 (434)
+++........+.+...+.++++. + .++++++.|+|+. .+|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~i~l~~~~~~~-----------------------------~~~~ 47 (385)
T PRK09276 6 DRIKNLPPYLFAEIDKKKAEKIAR---G------VDVISLGIGDPDL-----------------------------PTPD 47 (385)
T ss_pred hHhhhCCccHHHHHHHHHHHHHhc---C------CCEEEecCCCCCC-----------------------------CCCH
Confidence 445555555555555555555443 1 4689999999886 3466
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEc
Q 013892 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (434)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~ 221 (434)
.+.+++.+.+... ....|++..|.++||+++++|+.+++|..++++ +|++|+|+++++..++..++ ++||+|+++
T Consensus 48 ~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~-~~gd~Vl~~ 123 (385)
T PRK09276 48 HIIEAMCKAVEDP---ENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFV-NPGDVVLVP 123 (385)
T ss_pred HHHHHHHHHHhCC---CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC-CCCCEEEEc
Confidence 7788887777642 256899999999999999999998889888887 59999999999999999998 799999999
Q ss_pred CCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH
Q 013892 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 222 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
+|+|+.|...++..|++++.++++.+++|.+|++++++.+.+ ++++|+++|||||||.+++.+++++|+++|++
T Consensus 124 ~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~ 197 (385)
T PRK09276 124 DPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAK------KAKLMFINYPNNPTGAVADLEFFEEVVDFAKK 197 (385)
T ss_pred CCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccc------cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999998777788999999888765 78999999999999999999999999999999
Q ss_pred cCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh
Q 013892 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (434)
Q Consensus 302 ~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 381 (434)
+|++||+||+|.++.|++.. ..++... ... .+ ++|+++||||.| |++|+|+||+++ ++++++.+.+...
T Consensus 198 ~~~~ii~De~y~~~~~~~~~-~~~~~~~----~~~-~~-~~i~~~S~SK~~-g~~GlRiG~~i~---~~~l~~~~~~~~~ 266 (385)
T PRK09276 198 YDIIVCHDAAYSEIAYDGYK-PPSFLEV----PGA-KD-VGIEFHSLSKTY-NMTGWRIGFAVG---NADLIAGLGKVKS 266 (385)
T ss_pred CCcEEEEecchhheecCCCC-CCChhcc----CCC-cC-CEEEEecchhhc-CCcchhheeeeC---CHHHHHHHHHHHh
Confidence 99999999999998886532 3343322 211 12 479999999999 899999999986 8999999988765
Q ss_pred -cccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 382 -VNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 382 -~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
...+++.+.|.++..++.+ ..++++.++.++++|+.+.+.|++.
T Consensus 267 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (385)
T PRK09276 267 NVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL 312 (385)
T ss_pred hccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4556777889998888875 4556788889999999999999875
No 26
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.7e-42 Score=348.55 Aligned_cols=285 Identities=20% Similarity=0.283 Sum_probs=235.2
Q ss_pred cccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHH
Q 013892 96 FDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDT 175 (434)
Q Consensus 96 ~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ 175 (434)
.+++|++++|+|+..+. ..+|+.+.+++.+.+... ....|++..|.++||++
T Consensus 31 ~~~~i~l~~G~p~~~~~-------------------------~~~p~~~~~a~~~~~~~~---~~~~Y~~~~G~~~lr~a 82 (409)
T PLN00143 31 HRLAISFGFGDPSCFEC-------------------------FRTTNIAEDAIVEAVRSA---KFNSYAPTGGILPARRA 82 (409)
T ss_pred CCceeeCCCCCCCCCCC-------------------------CCCCHHHHHHHHHHHhCc---CCCCCCCCCCCHHHHHH
Confidence 37899999999983111 135788888888877653 25679999999999999
Q ss_pred HHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 176 IAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 176 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
+|+|+.+++|+++++++|++|+|+++++.+++++++ ++||.|+++.|+|+.|...++..|++++.++++++++|.+|++
T Consensus 83 ia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 161 (409)
T PLN00143 83 IADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLA-RPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLD 161 (409)
T ss_pred HHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHc-CCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHH
Confidence 999999999999999999999999999999999998 7999999999999999999999999999999976678999999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+|+++++. ++++++++|||||||.+++.+++++|+++|++++++||+||+|.++.|++. ++.++..+ .
T Consensus 162 ~l~~~~~~------~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~~~~~~~----~- 229 (409)
T PLN00143 162 AVEAIADE------NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK-PFVPMGLF----A- 229 (409)
T ss_pred HHHHhccc------CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC-CCcchhhh----c-
Confidence 99988765 789999999999999999999999999999999999999999999998653 23343322 1
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHH------HHHHHHHhhcccCCchHHHHHHHHHcCC--CCCChHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV------REQIYKVASVNLCSNISGQILASLVMSP--PKVGDES 407 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~------~~~l~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~ 407 (434)
...++|+++||||.| ++||+|+||+++.+ ++.+ ++.+.+......+++.+.|.++..++.+ ..+.++.
T Consensus 230 --~~~~vi~~~SfSK~f-~~pGlRvG~~v~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 305 (409)
T PLN00143 230 --SIVPVITLGSISKRW-MIPGWGLGWLVTCD-PSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKT 305 (409)
T ss_pred --ccCcEEEEccchhhc-CCCccceEEEEeeC-chhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHH
Confidence 122589999999999 89999999997622 2333 3444444433445688999999999875 2456778
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013892 408 YESYCAERDGILSSLARR 425 (434)
Q Consensus 408 ~~~~~~~r~~l~~~L~~~ 425 (434)
++.++++++.+.+.|++.
T Consensus 306 ~~~~~~~~~~~~~~L~~~ 323 (409)
T PLN00143 306 INILRAALAFCYDKLKEI 323 (409)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 888888888888888764
No 27
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.3e-41 Score=343.33 Aligned_cols=302 Identities=25% Similarity=0.336 Sum_probs=243.9
Q ss_pred hhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHH
Q 013892 65 VLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADS 144 (434)
Q Consensus 65 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v 144 (434)
+.+++..+...+...+.++++. | +++|+++.|+|.. .+|+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~---~------~~~i~l~~~~p~~-----------------------------~~~~~~ 48 (405)
T PRK09148 7 IRRLPPYVFEQVNRLKAAARAA---G------ADIIDLGMGNPDL-----------------------------PTPQHI 48 (405)
T ss_pred hhcCCccHHHHHHHHHHHHHhc---C------CCeEEcCCCCCCC-----------------------------CCCHHH
Confidence 4444545555554444444443 1 4689999999986 346778
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC
Q 013892 145 IERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIP 223 (434)
Q Consensus 145 ~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p 223 (434)
++++.+.+... ....|++..|.++||+++|+++.+++|..++++ +|++|+|+++++..++..++ ++||.|++++|
T Consensus 49 ~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vl~~~P 124 (405)
T PRK09148 49 VDKLCETAQDP---RTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAIT-APGDVILCPNP 124 (405)
T ss_pred HHHHHHHHcCc---ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhc-CCCCEEEEcCC
Confidence 88877766432 257899999999999999999998889888998 89999999999999999998 79999999999
Q ss_pred CChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC
Q 013892 224 QYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (434)
Q Consensus 224 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~ 303 (434)
+|+.|...++..|++++.++++.+++|-.+++ +.++.. ..++++|+++|||||||.+++.+++++|+++|+++|
T Consensus 125 ~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~---~~~~~~---~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~ 198 (405)
T PRK09148 125 SYPIHAFGFIMAGGVIRSVPAEPDEEFFPALE---RAVRHS---IPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHD 198 (405)
T ss_pred CCcccHHHHHhcCCEEEEEeCCCCCCCccCHH---HHHhhc---cccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999987655544444 444321 116889999999999999999999999999999999
Q ss_pred CEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-c
Q 013892 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-V 382 (434)
Q Consensus 304 ~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~ 382 (434)
++||+||+|.++.|++. ++.++... . ...+ ++|+++||||.| |+||+|+||+++ ++++++.+.+.+. .
T Consensus 199 ~~ii~De~Y~~~~~~~~-~~~s~~~~----~-~~~~-~~i~~~SfSK~~-~~pGlR~G~~v~---~~~~i~~l~~~~~~~ 267 (405)
T PRK09148 199 IIILSDLAYSEIYFDGN-PPPSVLQV----P-GAKD-VTVEFTSMSKTF-SMAGWRMGFAVG---NERLIAALTRVKSYL 267 (405)
T ss_pred eEEEEeccchhhhcCCC-CCCChhhC----C-CccC-cEEEEecccccc-CCcchheeeeeC---CHHHHHHHHHHHHHh
Confidence 99999999999988653 34444332 1 1123 478999999999 899999999987 9999999988876 4
Q ss_pred ccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 383 NLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 383 ~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
..+++.+.|.++..+++++ +++++.++.|+++|+.+.+.|+++
T Consensus 268 ~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 311 (405)
T PRK09148 268 DYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA 311 (405)
T ss_pred ccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5678899999999999754 557788899999999999999874
No 28
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1.8e-41 Score=340.63 Aligned_cols=300 Identities=26% Similarity=0.351 Sum_probs=250.6
Q ss_pred ChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCC
Q 013892 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (434)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (434)
++++.+.+...+..+...+.++++. .++++++++|+|+. ..|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~l~~~~~~~-----------------------------~~~ 45 (388)
T PRK07337 4 AARVDAIEPFYVMELAKEAQALERA---------GRDIIHMGIGEPDF-----------------------------TAP 45 (388)
T ss_pred hhHhHhcCchHHHHHHHHHHHHHhc---------CCCEEEeCCcCCCC-----------------------------CCC
Confidence 3445555555555555566555432 15789999999986 346
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEc
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~ 221 (434)
+.+.+++.+.+.. ....|++..|.++||+++|+|+.+++|+.+++++|++|+|+++++.+++..++ ++||+|+++
T Consensus 46 ~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~ 120 (388)
T PRK07337 46 EPVVEAAARALRR----GVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALV-ERGDEVLMP 120 (388)
T ss_pred HHHHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhc-CCCCEEEEe
Confidence 6778887777654 25679999999999999999999989999999999999999999999999998 799999999
Q ss_pred CCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH
Q 013892 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 222 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
+|+|+.+...++..|++++.++++++++|++|++++++.+++ ++++|++++||||||.+++.+++++|+++|++
T Consensus 121 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~ 194 (388)
T PRK07337 121 DPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE------RTRGVLLASPSNPTGTSIAPDELRRIVEAVRA 194 (388)
T ss_pred CCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHH
Confidence 999999999999999999999998777899999999998876 78999999999999999999999999999999
Q ss_pred cCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh
Q 013892 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (434)
Q Consensus 302 ~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 381 (434)
+++++|+||+|.++.|++. +.++.. +. + ++|+++||||.| |++|+|+||+++ ++++++.+.+...
T Consensus 195 ~~~~ii~De~y~~~~~~~~--~~~~~~----~~---~--~vi~~~S~SK~~-~~~G~RiG~~~~---~~~l~~~l~~~~~ 259 (388)
T PRK07337 195 RGGFTIVDEIYQGLSYDAA--PVSALS----LG---D--DVITINSFSKYF-NMTGWRLGWLVV---PEALVGTFEKLAQ 259 (388)
T ss_pred CCCEEEEeccccccccCCC--CcChhh----cc---C--CEEEEEechhhc-CCchhheeeeec---CHHHHHHHHHHHH
Confidence 9999999999999887653 223221 11 2 489999999999 899999999987 8899999988765
Q ss_pred -cccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 382 -VNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 382 -~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
...+++.+.|.++..++.+. ++.++.++.|+++|+.+.+.|+++
T Consensus 260 ~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 306 (388)
T PRK07337 260 NLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL 306 (388)
T ss_pred HhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55678999999998888753 335677888999999999998875
No 29
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-41 Score=336.74 Aligned_cols=275 Identities=20% Similarity=0.205 Sum_probs=226.7
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.+++++++|+|.+ ..|+.+.+++.+... ....|++..|.++||+++
T Consensus 24 ~~~i~l~~~~p~~-----------------------------~~~~~~~~a~~~~~~-----~~~~Y~~~~G~~~lr~ai 69 (374)
T PRK05839 24 YKGLDLTIGEPQF-----------------------------ETPKFIQDALKNNAH-----LLNKYPKSAGEESLREAQ 69 (374)
T ss_pred CCeEEcCCCCCCC-----------------------------CCCHHHHHHHHHHhh-----ccCCCCCCCCCHHHHHHH
Confidence 5899999999986 235556666655443 266799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
|+++++++|.++++++|++|+|+++++..++.+++. .+||.|+++.|+|+.|...++..|+++++++++++++|.+|++
T Consensus 70 a~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~ 149 (374)
T PRK05839 70 RGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLN 149 (374)
T ss_pred HHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcc
Confidence 999999999999999999999999999999888752 3789999999999999999999999999999987778888876
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhh-C
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM-G 334 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l-~ 334 (434)
+.+ + + ++|+|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++. +.++....... .
T Consensus 150 ~~~--~-~------~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~--~~s~~~~~~~~~~ 218 (374)
T PRK05839 150 EKE--L-Q------EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTP--PPSLLEASILVGN 218 (374)
T ss_pred hhh--h-c------cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCC--CCCHhhhhcccCc
Confidence 542 2 2 689999999999999999999999999999999999999999999755432 44443322110 0
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 413 (434)
..++ ++|+++||||.| |+||+|+||+++ ++++++++.+... ...+.+.+.|.++..++.+.+++++.++.+++
T Consensus 219 ~~~~--~vi~~~SfSK~~-~~~GlRiG~ii~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 292 (374)
T PRK05839 219 ESFK--NVLVINSISKRS-SAPGLRSGFIAG---DASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAK 292 (374)
T ss_pred cccC--cEEEEecccccc-CCccceeEEEec---CHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHH
Confidence 1112 589999999999 899999999987 8999999988765 45578888999988788777777888889999
Q ss_pred HHHHHHHHH
Q 013892 414 ERDGILSSL 422 (434)
Q Consensus 414 ~r~~l~~~L 422 (434)
+|+.+.+.|
T Consensus 293 ~~~~~~~~l 301 (374)
T PRK05839 293 NLKLAREIL 301 (374)
T ss_pred HHHHHHHhc
Confidence 988877655
No 30
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=5.7e-41 Score=336.38 Aligned_cols=277 Identities=22% Similarity=0.322 Sum_probs=237.4
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.++|+++.|+|.. .+++.+.+++.+.+.. ....|++..|.++||+++
T Consensus 29 ~~~i~l~~g~p~~-----------------------------~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~i 75 (384)
T PRK12414 29 HDALNLSQGAPNF-----------------------------APDPALVEGVARAMRD----GHNQYAPMAGIAALREAL 75 (384)
T ss_pred CCeEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHHh----CCCCcCCCCCcHHHHHHH
Confidence 4689999999876 3466777777776654 256799999999999999
Q ss_pred HHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
++++++++|.++++ ++|++|+|+++++..+++.++ ++||+|++++|+|..|...++..|++++.++++++ +|.+|++
T Consensus 76 a~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~ 153 (384)
T PRK12414 76 AEKTERLYGARYDPASEVTVIASASEGLYAAISALV-HPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPE-DFRVNWD 153 (384)
T ss_pred HHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhc-CCCCEEEEeCCCccchHHHHHHcCCEEEEEecCcc-ccccCHH
Confidence 99999988987776 689999999999999999998 79999999999999999999999999999998753 5889999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
.|++++++ ++++|+++|||||||.+++.+++++|+++|+++|+++|+||+|.++.|++.. +.++... ..
T Consensus 154 ~l~~~l~~------~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~----~~ 222 (384)
T PRK12414 154 EVAAAITP------RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGAR-HHSMARH----RE 222 (384)
T ss_pred HHHhhcCc------ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCC-ccCcccC----cC
Confidence 99998865 7999999999999999999999999999999999999999999999887642 3333221 11
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 414 (434)
. .+ ++|+++||||.| |+||+|+||+++ ++++++.+.+... ...+++.+.|.++..++.++.+..+.++.|+++
T Consensus 223 ~-~~-~~i~~~SfSK~~-~~pGlRiG~~v~---~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~ 296 (384)
T PRK12414 223 L-AE-RSVIVSSFGKSY-HVTGWRVGYCLA---PAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRK 296 (384)
T ss_pred c-cC-cEEEEecccccc-cCccceEEEEec---CHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHH
Confidence 1 12 589999999999 899999999987 8999999988776 566889999999999998765555678899999
Q ss_pred HHHHHHHHHHH
Q 013892 415 RDGILSSLARR 425 (434)
Q Consensus 415 r~~l~~~L~~~ 425 (434)
|+.+.+.|++.
T Consensus 297 r~~l~~~L~~~ 307 (384)
T PRK12414 297 RDLLARELAGS 307 (384)
T ss_pred HHHHHHHHHhC
Confidence 99999999875
No 31
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=3.4e-41 Score=340.74 Aligned_cols=306 Identities=25% Similarity=0.329 Sum_probs=242.1
Q ss_pred cccChhhhcccc-cccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccC
Q 013892 59 DSLNPKVLKCEY-AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQ 137 (434)
Q Consensus 59 ~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~ 137 (434)
..||..+.++.. ..+..+..++.+++++ ++.++++++++|+|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~l~~~~~~~---------------------------- 46 (409)
T PRK07590 2 AKINENYLKLKAGYLFPEIARRVNAFREA-------NPEAKIIRLGIGDVTQ---------------------------- 46 (409)
T ss_pred cccccccCccCCcchHHHHHHHHHHHhhh-------cCCCceEEecCcCCCC----------------------------
Confidence 346666666553 3455666777776654 1235799999999987
Q ss_pred CCCCHHHHHHHHHHHHcCCC-CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC
Q 013892 138 GLFSADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (434)
Q Consensus 138 ~~~p~~v~~~~~~~l~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd 216 (434)
.+|+.+.+++.+.+.+... .....|++..|.++||+++|+++.+.+|+++++++|++|+|+++++.+++ .++ ++||
T Consensus 47 -~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~-~~~-~~gd 123 (409)
T PRK07590 47 -PLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNIL-DIF-GPDN 123 (409)
T ss_pred -CCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHH-Hhc-CCCC
Confidence 4567788888877765311 13578999999999999999999888999999999999999999999875 455 6999
Q ss_pred EEEEcCCCChhHHHHHHHcCCe-----------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 217 GILCPIPQYPLYSASIALHGGT-----------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 217 ~Vlv~~p~y~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
+|++++|+|+.|...++..|++ +++++++.+++|.+|++. + ++++|+++|||||||.
T Consensus 124 ~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~------~~k~i~l~nP~NPTG~ 191 (409)
T PRK07590 124 TIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------E------KVDIIYLCFPNNPTGT 191 (409)
T ss_pred EEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc------c------CceEEEEeCCCCCcCC
Confidence 9999999999999999999987 899999866667666432 2 7899999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+++.+++++|+++|+++|++||+||+|.++.+++.. ..++... . ...+ ++|+++||||.| |+||+|+||+++
T Consensus 192 ~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~-~~~~~~~----~-~~~~-~vi~~~SfSK~~-~~pGlRiG~~i~ 263 (409)
T PRK07590 192 VLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSL-PHSIYEI----E-GARE-CAIEFRSFSKTA-GFTGTRCAYTVV 263 (409)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCC-CcchhhC----C-Cccc-ceEEEecCcccc-CCcCceeEEEEc
Confidence 999999999999999999999999999998876531 2333222 1 1122 589999999999 899999999987
Q ss_pred ecCCHHHHHHH------------HHHhh-cccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQI------------YKVAS-VNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 366 ~~~~~~~~~~l------------~~~~~-~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++++++.+ ..... .+.+++.+.|.++..++.+. +++++.++.|+++|+.+.+.|+++
T Consensus 264 ---~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 335 (409)
T PRK07590 264 ---PKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA 335 (409)
T ss_pred ---CHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88888732 22222 33468899999998888753 456678889999999999999875
No 32
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.2e-40 Score=336.22 Aligned_cols=307 Identities=30% Similarity=0.503 Sum_probs=245.8
Q ss_pred ChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCC
Q 013892 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (434)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (434)
|+++.++++.++..+..++.+++.. .+++|++++|+|...+. ..|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~l~~g~p~~~~~--------------------------~~~ 51 (404)
T PRK09265 7 SSKLENVCYDIRGPVLKEAKRLEEE---------GHKILKLNIGNPAPFGF--------------------------EAP 51 (404)
T ss_pred hHHHHhcCcchhHHHHHHHHHHHHc---------CCCeEEecCCCCCcCCC--------------------------CCC
Confidence 3567777877877777777766432 15899999999975322 246
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEc
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~ 221 (434)
+.+++++.+.+.. ...|++..|.++||+++|+++.++.+.++++++|++|+|+++++..++++++ ++||+|+++
T Consensus 52 ~~i~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~ 125 (404)
T PRK09265 52 DEILRDVIRNLPT-----AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALL-NNGDEVLVP 125 (404)
T ss_pred HHHHHHHHHHhhc-----CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhC-CCCCEEEEe
Confidence 7788777766542 4679999999999999999998765557899999999999999999999998 799999999
Q ss_pred CCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH
Q 013892 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 222 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
+|+|+.|...++..|++++.++++.+++|.+|++++++++++ ++++|+++|||||||.+++.+++++|+++|++
T Consensus 126 ~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~ 199 (404)
T PRK09265 126 APDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP------RTKAIVIINPNNPTGAVYSKELLEEIVEIARQ 199 (404)
T ss_pred CCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 999999999999999999999887666788999999998865 78999999999999999999999999999999
Q ss_pred cCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH----HHHHHH
Q 013892 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE----VREQIY 377 (434)
Q Consensus 302 ~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~----~~~~l~ 377 (434)
+|++||+||+|.++.|++. ++.++... . ++.++|+++||||.| |+||+|+||+++.+ +++ +++.+.
T Consensus 200 ~~~~ii~De~y~~~~~~~~-~~~~~~~~----~---~~~~vi~~~S~SK~~-~~pGlRiG~~v~~~-~~~~~~~~~~~~~ 269 (404)
T PRK09265 200 HNLIIFADEIYDKILYDGA-VHISIASL----A---PDLLCVTFNGLSKAY-RVAGFRVGWMVLSG-PKKHAKGYIEGLD 269 (404)
T ss_pred CCCEEEEehhhhhccCCCC-CcCCHHHc----C---CCceEEEEecchhhc-cCcccceEEEEEeC-chHHHHHHHHHHH
Confidence 9999999999999988654 24444332 1 233689999999999 88999999998633 444 444444
Q ss_pred HHhhcccCCchHHHHHHHHHcCCCCCChHH---HHHHHHHHHHHHHHHHHH
Q 013892 378 KVASVNLCSNISGQILASLVMSPPKVGDES---YESYCAERDGILSSLARR 425 (434)
Q Consensus 378 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~---~~~~~~~r~~l~~~L~~~ 425 (434)
.......+++.++|.++..+|.+.++.++. .+.+.++|+.+.+.|+++
T Consensus 270 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 320 (404)
T PRK09265 270 MLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAI 320 (404)
T ss_pred HHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 333345688999999999999764433222 246777888888888764
No 33
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-41 Score=337.49 Aligned_cols=304 Identities=23% Similarity=0.334 Sum_probs=252.4
Q ss_pred hhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCH
Q 013892 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (434)
Q Consensus 63 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~ 142 (434)
+++..........+..+++++... .++++++++|.|.. ..|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~l~~g~p~~-----------------------------~~~~ 49 (402)
T PRK06107 8 ARVSRIKPSPSTAAAARARELRAA---------GRSIVDLTVGEPDF-----------------------------DTPD 49 (402)
T ss_pred HHhhhcCccHHHHHHHHHHHHHhc---------cCCEEEcCCCCCCC-----------------------------CCCH
Confidence 344444444333344455555332 15799999999986 3466
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcC
Q 013892 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (434)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~ 222 (434)
.+.+++.+.+.. ....|++..|.++||+++++++.+++|..+++++|++|+|+++++..++..++ ++||.|++++
T Consensus 50 ~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~vl~~~ 124 (402)
T PRK06107 50 HIKQAAVAAIER----GETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATL-EAGDEVIIPA 124 (402)
T ss_pred HHHHHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhc-CCCCEEEEec
Confidence 777777777764 25679999999999999999999988988899999999999999999999888 7999999999
Q ss_pred CCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc
Q 013892 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (434)
Q Consensus 223 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~ 302 (434)
|+|..|...+...|+.++.++++.+++|.+|++++++++++ ++++|+++||+||||.+++.+++++|+++|+++
T Consensus 125 p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~ 198 (402)
T PRK06107 125 PYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP------RTRWLILNAPSNPTGAVYSRAELRALADVLLRH 198 (402)
T ss_pred CCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999887667789999999998865 789999999999999999999999999999998
Q ss_pred -CCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh
Q 013892 303 -GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (434)
Q Consensus 303 -~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 381 (434)
++++|+||+|.++.|++. ++.++.....++ .+ ++|+++||||.| |+||+|+||+++ ++++++.+.....
T Consensus 199 ~~~~iI~De~y~~l~~~~~-~~~~~~~~~~~~----~~-~vi~~~S~SK~~-~~pGlRiG~~~~---~~~~~~~~~~~~~ 268 (402)
T PRK06107 199 PHVLVLTDDIYDHIRFDDE-PTPHLLAAAPEL----RD-RVLVTNGVSKTY-AMTGWRIGYAAG---PADLIAAINKLQS 268 (402)
T ss_pred CCeEEEEehhccccccCCC-CCCCHHHhCcCc----cC-CEEEEeccchhh-cCcccceeeeec---CHHHHHHHHHHHH
Confidence 999999999999988764 355554432221 12 589999999999 899999999987 8999999988876
Q ss_pred -cccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 382 -VNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 382 -~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
...+++.+.|.++..+++. .+++++.++.|+++++.+.+.|++.
T Consensus 269 ~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 314 (402)
T PRK06107 269 QSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAI 314 (402)
T ss_pred hcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5678999999999999964 4567788899999999999999764
No 34
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=3.1e-41 Score=339.70 Aligned_cols=272 Identities=20% Similarity=0.216 Sum_probs=212.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCE--EEcCChHHHHHHHHHHHhc-CCCCEE
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI--FLTDGASPAVHMMMQLLIR-SENDGI 218 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i--~~t~G~~~al~~~l~~l~~-~~gd~V 218 (434)
+.+.+++.+.++.. ....|++..|.++||+++++|+.++.+..+++++| ++|+|+++++.++++.+.. ++||+|
T Consensus 47 ~~l~~a~~~~~~~~---~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~V 123 (396)
T PRK09257 47 RAVKKAEARLLETE---TTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKV 123 (396)
T ss_pred HHHHHHHHHhcccc---cCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeE
Confidence 45555555554332 25689999999999999999998776655688887 9999999999999876631 699999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
++++|+|+.|..+++..|++++.+++.++++|++|++.++++++.. ..+.+++++++||||||.+++.+++++|+++
T Consensus 124 lv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~ 200 (396)
T PRK09257 124 WVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQA---PAGDVVLLHGCCHNPTGADLTPEQWDELAEL 200 (396)
T ss_pred EECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999854446899999999988742 1134556667999999999999999999999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH----HHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE----VRE 374 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~----~~~ 374 (434)
|++||++||+||+|.++.++.+.++.++..+ ....+ ++|+++||||.| +++|+|+||+++...+++ +++
T Consensus 201 a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~----~~~~~--~vi~i~SfSK~~-~~~GlRiG~~~~~~~~~~~~~~~~~ 273 (396)
T PRK09257 201 LKERGLIPFLDIAYQGFGDGLEEDAYGLRAF----AAAGL--ELLVASSFSKNF-GLYGERVGALSVVAEDAEEADRVLS 273 (396)
T ss_pred HHhCCcEEEEeccccccccchHHHHHHHHHH----HhcCC--cEEEEEEcCCcC-ccccccceeEEEEeCCHHHHHHHHH
Confidence 9999999999999999877522112333222 11112 489999999999 889999999974333444 334
Q ss_pred HHHHHhh-cccCCchHHHHHHHHHcCCC-------CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 375 QIYKVAS-VNLCSNISGQILASLVMSPP-------KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 375 ~l~~~~~-~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++.+... .+.+++.+.|.++..+++++ +++++.++.|+++|+.+.+.|++..
T Consensus 274 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~ 333 (396)
T PRK09257 274 QLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKG 333 (396)
T ss_pred HHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4434333 56678899999999999874 3355678899999999999998763
No 35
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=9.3e-41 Score=334.34 Aligned_cols=277 Identities=24% Similarity=0.403 Sum_probs=238.0
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+.+|+++.|+|.. ..++.+.+++.+.+.. ....|++..|.+++|+++
T Consensus 20 ~~~i~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~i 66 (378)
T PRK07682 20 EGVISLGVGEPDF-----------------------------VTPWNVREASIRSLEQ----GYTSYTANAGLLELRQEI 66 (378)
T ss_pred CCeEEeCCCCCCC-----------------------------CCCHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHH
Confidence 3689999999986 2355566776666653 256799999999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
|+++.+++|+.++++ +|++|+|+++++.+++..++ ++||+|++++|+|+.|...++..|++++.++++.+++|++|++
T Consensus 67 a~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 145 (378)
T PRK07682 67 AKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAII-NPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPA 145 (378)
T ss_pred HHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhC-CCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHH
Confidence 999999889888886 79999999999999999998 7999999999999999999999999999999876667899999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+|++++.+ ++++|++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++. +.++... .+
T Consensus 146 ~l~~~~~~------~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~----~~ 213 (378)
T PRK07682 146 QIEAAITA------KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA--YTSFASI----KG 213 (378)
T ss_pred HHHhhcCc------ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC--CCChhhc----cc
Confidence 99998876 789999999999999999999999999999999999999999999988753 3444332 11
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP-KVGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~ 413 (434)
..+ ++|+++||||.| |++|+|+||+++ ++++++.+.+... ...+++.+.|.++..++++. .++++.++.|++
T Consensus 214 ~~~--~~i~~~S~SK~~-~~~GlR~G~~~~---~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 287 (378)
T PRK07682 214 MRE--RTILISGFSKGF-AMTGWRLGFIAA---PVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRK 287 (378)
T ss_pred ccC--CEEEEecCcccc-cChhhhhhhhhc---CHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 112 589999999999 899999999987 8999999987765 45678899999999999764 456778899999
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+|+.+.+.|++.
T Consensus 288 ~~~~~~~~L~~~ 299 (378)
T PRK07682 288 RRNFFVTSFNEI 299 (378)
T ss_pred HHHHHHHHHHHC
Confidence 999999999875
No 36
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=2.2e-40 Score=328.27 Aligned_cols=261 Identities=21% Similarity=0.342 Sum_probs=224.7
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCC--
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSEN-- 215 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~g-- 215 (434)
..|+.+.+++.+.... ...|++..|.++||+++++|+.+++|++++++ +|++|+|+++++..++..++ ++|
T Consensus 13 ~~~~~~~~~~~~~~~~-----~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~-~~g~~ 86 (350)
T TIGR03537 13 PTPPFIRKALIDAVPE-----VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI-DPEED 86 (350)
T ss_pred CCCHHHHHHHHHHHhc-----cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc-CCCCC
Confidence 3466777777766432 56799999999999999999999899999998 99999999999999999998 676
Q ss_pred -CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHH
Q 013892 216 -DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (434)
Q Consensus 216 -d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~ 294 (434)
|+|+++.|+|+.|...++..|++++.++++++++|.+|++++++++++ +++++++++||||||.+++.+++++
T Consensus 87 ~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~ 160 (350)
T TIGR03537 87 RRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE------ETKIVWINYPHNPTGATAPRSYLKE 160 (350)
T ss_pred CceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh------ccEEEEEeCCCCCcCcccCHHHHHH
Confidence 699999999999999999999999999998767889999999999876 7899999999999999999999999
Q ss_pred HHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHH
Q 013892 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (434)
Q Consensus 295 i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~ 374 (434)
|+++|+++|++||+||+|.++.+++. ..++.. ++ .+ ++|+++||||.| |++|+|+||+++ ++++++
T Consensus 161 l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~----~~---~~-~~i~~~s~SK~~-g~~GlRiG~~~~---~~~~~~ 226 (350)
T TIGR03537 161 TIAMCREHGIILCSDECYTEIYFGEP--PHSALE----VG---IE-NVLAFHSLSKRS-GMTGYRSGFVAG---DEKLIS 226 (350)
T ss_pred HHHHHHHcCcEEEEeccccccccCCC--CCchhh----cC---cC-CEEEEeeccccc-CCccccceeeec---CHHHHH
Confidence 99999999999999999999877643 333322 11 22 589999999999 899999999976 899999
Q ss_pred HHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 375 QIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 375 ~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++.+... ...+++.+.|.++...+.+++++++.++.++++++.+.+.|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~ 278 (350)
T TIGR03537 227 FLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV 278 (350)
T ss_pred HHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9988765 45566777888887777776677788899999999999888875
No 37
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=309.52 Aligned_cols=285 Identities=24% Similarity=0.310 Sum_probs=247.6
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
++||.+++|+|...+.- ...+.+.+++.+++... ..++|+|+.|....|+++
T Consensus 61 k~iipl~~GDPsv~~~~-------------------------~ts~~a~~Av~~al~Sg---k~N~Yaps~G~~~AR~AV 112 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCF-------------------------RTSQEAEQAVVDALRSG---KGNGYAPSVGILPARRAV 112 (447)
T ss_pred ceeccCCCCCCCccccc-------------------------cCCHHHHHHHHHHHhcC---CCCCcCCccccHHHHHHH
Confidence 48999999999985542 34677888888888875 378999999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
|+|+.+.....+++++|++|+|.++||.+++.+|. +||..|++|.|+|+.|...+...|+++++|.+-++++|.+|++.
T Consensus 113 AeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA-~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~ 191 (447)
T KOG0259|consen 113 AEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA-NPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDG 191 (447)
T ss_pred HHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc-CCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHH
Confidence 99998887778999999999999999999999998 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
++..+++ ++.+++++||+||+|.+++.+.+++|+++|+++|+.||.||+|..++|++. +|.++.++.
T Consensus 192 veal~DE------NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~-pfvpmg~fs------ 258 (447)
T KOG0259|consen 192 VEALADE------NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDK-PFVPMGKFS------ 258 (447)
T ss_pred HHHhhcc------CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCC-Cccchhhcc------
Confidence 9999998 899999999999999999999999999999999999999999999999986 588876654
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEec-----CCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCC--CCChHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTG-----FSAEVREQIYKVASVNLCSNISGQILASLVMSPP--KVGDESYE 409 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~ 409 (434)
..+.+|.++|+||.| -.||||+||++... .+..+++.+.++......|+++.|.+.-.+|... ++.+....
T Consensus 259 -siVPVitlggisKrW-~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~ 336 (447)
T KOG0259|consen 259 -SIVPVITLGGISKRW-IVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLS 336 (447)
T ss_pred -ccCceEeeccccccc-ccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHH
Confidence 455799999999999 58999999998643 2444667788877778899999999998888742 33455556
Q ss_pred HHHHHHHHHHHHHHHH
Q 013892 410 SYCAERDGILSSLARR 425 (434)
Q Consensus 410 ~~~~~r~~l~~~L~~~ 425 (434)
..+.+.+...+.|++.
T Consensus 337 ~lk~na~l~y~~Lk~I 352 (447)
T KOG0259|consen 337 FLKSNADLCYSRLKDI 352 (447)
T ss_pred HHHhhHHHHHHHHhcC
Confidence 6666666666666653
No 38
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.4e-41 Score=338.19 Aligned_cols=255 Identities=17% Similarity=0.184 Sum_probs=205.3
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEE--EcCChHHHHHHHHH---HHhcCCCCEEEEcCCCChhHHHHHHH
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIF--LTDGASPAVHMMMQ---LLIRSENDGILCPIPQYPLYSASIAL 234 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~--~t~G~~~al~~~l~---~l~~~~gd~Vlv~~p~y~~~~~~~~~ 234 (434)
..+|++..|.++||+++++|+.+..+..+++++|+ .|.|+++++..++. .++ ++||+|++++|+|+.|...++.
T Consensus 65 ~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~-~~Gd~Vlv~~P~y~~~~~~~~~ 143 (404)
T PTZ00376 65 DKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFL-PAGTTVYVSNPTWPNHVNIFKS 143 (404)
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhc-CCCCEEEEcCCCchhHHHHHHH
Confidence 57899999999999999999977766668899998 59999999988875 556 7999999999999999999999
Q ss_pred cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 013892 235 HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
.|++++.+++.++++|++|++.++++++... .+.++++++|||||||.+++.+++++|+++|++|+++||+||+|.+
T Consensus 144 ~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~---~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~ 220 (404)
T PTZ00376 144 AGLNVKEYRYYDPKTKGLDFDGMLEDLRTAP---NGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQG 220 (404)
T ss_pred cCCceeeccccCcccCCcCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcC
Confidence 9999999999655678999999999986421 1356777789999999999999999999999999999999999999
Q ss_pred CccCCC-CCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHH----HHHhh-cccCCch
Q 013892 315 NVYVPE-KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI----YKVAS-VNLCSNI 388 (434)
Q Consensus 315 ~~~~~~-~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l----~~~~~-~~~~~~~ 388 (434)
+.|++. ..+.++... ....+ ++|+++||||.| |++|+|+||+++...++++++.+ .+... .+.+++.
T Consensus 221 ~~~~~~~~~~~~~~~~----~~~~~--~vi~i~SfSK~~-~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 293 (404)
T PTZ00376 221 FASGDLDKDAYAIRLF----AERGV--EFLVAQSFSKNM-GLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPI 293 (404)
T ss_pred ccCCCHHHHHHHHHHH----HhcCC--cEEEEEeCCCcc-cccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCch
Confidence 988541 012222222 11112 589999999999 89999999995322377755544 33333 5567788
Q ss_pred HHHHHHHHHcCCCC-------CChHHHHHHHHHHHHHHHHHHHH
Q 013892 389 SGQILASLVMSPPK-------VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 389 ~~q~~~~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.|.++..++++++ +.++.++.|+++|+.+.+.|++.
T Consensus 294 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 337 (404)
T PTZ00376 294 HGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKAL 337 (404)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998752 13455678889999999999876
No 39
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=332.61 Aligned_cols=277 Identities=20% Similarity=0.319 Sum_probs=233.7
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.+++++++|+|+. ..|+.+++.+.+.+.. ....|++..|.++||+++
T Consensus 26 ~~~i~l~~g~p~~-----------------------------~~p~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~i 72 (387)
T PRK08912 26 HGAINLGQGFPDD-----------------------------PGPEDVRRAAADALLD----GSNQYPPMMGLPELRQAV 72 (387)
T ss_pred CCeEEccCCCCCC-----------------------------CCCHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHH
Confidence 3689999999985 2366788877776654 256799999999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
++++.+.+|+.++++ +|++|+|+++++..++..++ ++||+|+++.|+|+.|...++..|++++.+++++ ++|++|++
T Consensus 73 a~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~ 150 (387)
T PRK08912 73 AAHYARFQGLDLDPETEVMVTSGATEALAAALLALV-EPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRA 150 (387)
T ss_pred HHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHH
Confidence 999998889989998 99999999999999999998 7999999999999999999999999999999864 35899999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
.|++.++. ++++|+++|||||||.+++.+++++|+++|++++++||+||+|.++.|++. ++.++... ..
T Consensus 151 ~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~----~~ 219 (387)
T PRK08912 151 ALAAAFSP------RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGR-RHIPLMTL----PG 219 (387)
T ss_pred HHHHHhCc------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCC-CCcChhhC----CC
Confidence 99998876 789999999999999999999999999999999999999999999988753 23443322 11
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcC-CCCCChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMS-PPKVGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~ 413 (434)
. .+ ++|+++||||.| |++|+|+||+++ ++++++.+..... ...+.+...|.++...+. +.++.++.++.+++
T Consensus 220 ~-~~-~~i~~~S~SK~~-g~~GlRiG~~~~---~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 293 (387)
T PRK08912 220 M-RE-RTVKIGSAGKIF-SLTGWKVGFVCA---APPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLAR 293 (387)
T ss_pred c-cC-ceEEEeechhhc-cCcCceeEEEec---CHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 1 12 579999999999 899999999987 8999999887765 334566667777766664 34566788899999
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+|+.+.+.|++.
T Consensus 294 ~~~~l~~~L~~~ 305 (387)
T PRK08912 294 SRDRLAAGLRRI 305 (387)
T ss_pred HHHHHHHHHHhC
Confidence 999999999875
No 40
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.3e-40 Score=334.12 Aligned_cols=277 Identities=22% Similarity=0.296 Sum_probs=238.3
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|+|+. ..++.+.+++.+.+.. ....|++..|.+++|+++
T Consensus 30 ~~~i~l~~g~~~~-----------------------------~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~~ 76 (386)
T PRK09082 30 HGAINLSQGFPDF-----------------------------DGPPYLVEALAYAMAA----GHNQYPPMTGVAALREAI 76 (386)
T ss_pred CCEEEecCCCCCC-----------------------------CCCHHHHHHHHHHHHc----CCCCCCCCCCcHHHHHHH
Confidence 4689999999986 2356677777776654 256799999999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
++++.+.+|..++++ +|++|+|+++++..++..++ ++||+|+++.|+|+.+...++..|++++.++++++ +|.+|++
T Consensus 77 a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~ 154 (386)
T PRK09082 77 AAKTARLYGRQYDADSEITVTAGATEALFAAILALV-RPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPP-DFRVDWQ 154 (386)
T ss_pred HHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHc-CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcc-cccCCHH
Confidence 999999889887776 89999999999999999998 79999999999999999999999999999999754 5899999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
++++.+++ ++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.|++. ++.++... ..
T Consensus 155 ~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~-~~~s~~~~----~~ 223 (386)
T PRK09082 155 RFAAAISP------RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA-GHASVLRH----PE 223 (386)
T ss_pred HHHHhcCc------cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC-CCCChhhC----cC
Confidence 99998876 789999999999999999999999999999999999999999999998653 24444332 11
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcC-CCCCChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMS-PPKVGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~ 413 (434)
. .+ ++|+++||||.| |++|+|+||+++ ++++++.+.+... ...+++.+.|.++..+++ ++++.++.++.|++
T Consensus 224 ~-~~-~~i~~~S~SK~~-~~~G~RiG~iv~---~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 297 (386)
T PRK09082 224 L-RE-RAFVVSSFGKTY-HVTGWKVGYCVA---PAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQA 297 (386)
T ss_pred c-cC-cEEEEeechhhc-cchhhhhhhhhC---CHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 1 12 589999999999 899999999987 8999999988875 556889999999888887 56667788899999
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+++.+.+.|++.
T Consensus 298 ~~~~~~~~L~~~ 309 (386)
T PRK09082 298 KRDRFRAALANS 309 (386)
T ss_pred HHHHHHHHHHhC
Confidence 999999999874
No 41
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=2.3e-40 Score=334.04 Aligned_cols=286 Identities=21% Similarity=0.335 Sum_probs=235.3
Q ss_pred CcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHH
Q 013892 95 SFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRD 174 (434)
Q Consensus 95 p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~ 174 (434)
|.++++++++|+|+..+. ..+++.+.+++.+.+... ....|++..|..+||+
T Consensus 29 ~~~~~i~l~~g~p~~~~~-------------------------~~~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~ 80 (401)
T TIGR01264 29 PEKPMIKLSIGDPTVFGN-------------------------LPTDPEVMQAMKDSLDSG---KYNGYAPTVGALSARE 80 (401)
T ss_pred cCCCeeecCCCCCCCcCC-------------------------CCCCHHHHHHHHHHHhcc---CCCCCCCCCCCHHHHH
Confidence 346899999999963111 134677888877776652 2567999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCH
Q 013892 175 TIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLET 254 (434)
Q Consensus 175 ~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (434)
++++++.++ +..+++++|++|+|+++++.+++.+++ ++||+|+++.|+|..|...++..|++++.++++.+++|++|+
T Consensus 81 aia~~~~~~-~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~ 158 (401)
T TIGR01264 81 AIASYYHNP-DGPIEADDVVLCSGCSHAIEMCIAALA-NAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDL 158 (401)
T ss_pred HHHHHHhhc-CCCCCHHHEEECcChHHHHHHHHHHhC-CCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCH
Confidence 999999874 557899999999999999999999998 799999999999999999999999999999998777889999
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhC
Q 013892 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~ 334 (434)
+.|++.+++ ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ++.++... .
T Consensus 159 ~~l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~----~ 227 (401)
T TIGR01264 159 KQLESLIDE------KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA-TFEPLASL----S 227 (401)
T ss_pred HHHHHHhcc------CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc-ccccHHHc----C
Confidence 999988865 689999999999999999999999999999999999999999999988753 24444332 2
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH---HHHHHHHHHhhcccCCchHHHHHHHHHcCC--CCCChHHHH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA---EVREQIYKVASVNLCSNISGQILASLVMSP--PKVGDESYE 409 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~ 409 (434)
++.++|+++||||.| +++|+|+||+++....+ ++++.+.++.....+++.+.|.++..++.+ .+++++.++
T Consensus 228 ---~~~~vi~~~SfSK~~-~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~ 303 (401)
T TIGR01264 228 ---STVPILSCGGLAKRW-LVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLS 303 (401)
T ss_pred ---CCCcEEEEccCcccC-CCccceEEEEEecCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHH
Confidence 333589999999999 89999999998721011 455555554433457889999999998875 356778889
Q ss_pred HHHHHHHHHHHHHHHH
Q 013892 410 SYCAERDGILSSLARR 425 (434)
Q Consensus 410 ~~~~~r~~l~~~L~~~ 425 (434)
.++++|+.+.+.|+++
T Consensus 304 ~~~~~r~~l~~~L~~~ 319 (401)
T TIGR01264 304 VLESNAMLCYGALAAV 319 (401)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999999875
No 42
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-40 Score=331.09 Aligned_cols=279 Identities=24% Similarity=0.353 Sum_probs=238.2
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|+|.. .+|+.+.+++.+.+.+. ...|++..|.+++|+++
T Consensus 24 ~~~i~l~~g~~~~-----------------------------~~~~~~~~~~~~~~~~~----~~~Y~~~~G~~~lr~~l 70 (382)
T PRK06108 24 EGVLPLWFGESDL-----------------------------PTPDFIRDAAAAALADG----ETFYTHNLGIPELREAL 70 (382)
T ss_pred CCeEEecCCCCCC-----------------------------CCCHHHHHHHHHHHhcC----CCCCCCCCCCHHHHHHH
Confidence 4689999999986 34677888877777652 45699999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCC-CCCCCCHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA-TGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~ 255 (434)
++++.+++|..+++++|++|+|+++++..++..++ ++||.|+++.|+|+.|...++..|++++.++++.+ ++|.+|++
T Consensus 71 a~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~ 149 (382)
T PRK06108 71 ARYVSRLHGVATPPERIAVTSSGVQALMLAAQALV-GPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLD 149 (382)
T ss_pred HHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHH
Confidence 99999988988999999999999999999999998 79999999999999999999999999999999753 46889999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
.|++.+++ ++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.|++.....++..+..
T Consensus 150 ~l~~~~~~------~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~---- 219 (382)
T PRK06108 150 RLLAAITP------RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAE---- 219 (382)
T ss_pred HHHHhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCC----
Confidence 99998865 78999999999999999999999999999999999999999999998862222334333211
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP-KVGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~ 413 (434)
. +.++|+++||||.| |++|+|+||+++ ++++++.+.+... ...+++.+.|.++..++.+. +++++.++++++
T Consensus 220 ~--~~~~i~~~S~SK~~-g~~G~RiG~~~~---~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 293 (382)
T PRK06108 220 P--DDRIIFVNSFSKNW-AMTGWRLGWLVA---PPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRR 293 (382)
T ss_pred C--cCCEEEEeechhhc-cCcccceeeeeC---CHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 1 12589999999999 889999999987 8999999987765 56678999999999898764 456777888899
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+++.+.+.|++.
T Consensus 294 ~~~~l~~~L~~~ 305 (382)
T PRK06108 294 SRDHLVDALRAL 305 (382)
T ss_pred HHHHHHHHHHhC
Confidence 999998888765
No 43
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=2.4e-40 Score=334.86 Aligned_cols=285 Identities=18% Similarity=0.283 Sum_probs=236.6
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|+|..... ..+|+.+.+++.+.+... ....|++..|.++||+++
T Consensus 33 ~~~i~l~~g~p~~~~~-------------------------~~p~~~~~~a~~~~~~~~---~~~~Y~~~~G~~~Lr~ai 84 (412)
T PTZ00433 33 KSIIKLSVGDPTLDGN-------------------------LLTPAIQTKALVEAVDSQ---ECNGYPPTVGSPEAREAV 84 (412)
T ss_pred CCeeecCCcCCCCcCC-------------------------CCCCHHHHHHHHHHhhcC---CCCCCCCCCCcHHHHHHH
Confidence 5899999999984110 023666777777766642 257899999999999999
Q ss_pred HHHHHhhc------CCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCC
Q 013892 177 AAGIEARD------GFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 250 (434)
Q Consensus 177 a~~~~~~~------g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 250 (434)
|+++.+++ |..+++++|++|+|+++++.+++.+++ ++||+|+++.|+|+.|...++..|++++.++++++++|
T Consensus 85 a~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~ 163 (412)
T PTZ00433 85 ATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALC-DEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDW 163 (412)
T ss_pred HHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhc-CCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccC
Confidence 99998765 466889999999999999999999998 79999999999999999999999999999999877789
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHH
Q 013892 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVS 330 (434)
Q Consensus 251 ~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~ 330 (434)
++|+++|++++++ ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ++.++...
T Consensus 164 ~~d~~~l~~~~~~------~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~- 235 (412)
T PTZ00433 164 EADLDEIRRLVDD------RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA-TFTSVADF- 235 (412)
T ss_pred cCCHHHHHHHhcc------CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC-Cccchhhc-
Confidence 9999999988876 789999999999999999999999999999999999999999999988753 23443322
Q ss_pred hhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecC---CHHHHHHHHHHhhcccCCchHHHHHHHHHcCC--CCCCh
Q 013892 331 RSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF---SAEVREQIYKVASVNLCSNISGQILASLVMSP--PKVGD 405 (434)
Q Consensus 331 ~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~ 405 (434)
. ++.++|+++||||.| |+||+|+||+++.+. .+++++.+.+......+++.+.|.++..++.+ ..+++
T Consensus 236 ---~---~~~~~i~~~SfSK~~-~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~ 308 (412)
T PTZ00433 236 ---D---TTVPRVILGGTAKNL-VVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLE 308 (412)
T ss_pred ---c---CCCceEEEccchhhc-CCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHH
Confidence 2 122479999999999 899999999985221 24677777776554457899999998888865 35577
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 013892 406 ESYESYCAERDGILSSLARR 425 (434)
Q Consensus 406 ~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.++.++++|+.+.+.|+++
T Consensus 309 ~~~~~~~~~r~~l~~~L~~~ 328 (412)
T PTZ00433 309 QIVAKLEEGAMVLYNHIGEC 328 (412)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 88889999999999998764
No 44
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.3e-40 Score=337.69 Aligned_cols=260 Identities=23% Similarity=0.335 Sum_probs=219.9
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCC--CCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HcC
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFP--ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHG 236 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~--~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~-~~g 236 (434)
...|++..|.++||++||+|+.+++|.+ +++++|++|+|+++++..++.+++ ++||.|++++|+|+.|...+. ..|
T Consensus 79 l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~-~pGd~Vlv~~P~Y~~~~~~~~~~~g 157 (468)
T PLN02450 79 LALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA-EPGDAFLLPTPYYPGFDRDLKWRTG 157 (468)
T ss_pred hhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC-CCCCEEEECCCCCCchHHHHhhcCC
Confidence 4569999999999999999999877744 789999999999999999999999 899999999999999988888 589
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
+++++++++++++|.+|++.++++++++.+++.++|+|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.
T Consensus 158 ~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~ 237 (468)
T PLN02450 158 VEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTV 237 (468)
T ss_pred cEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccc
Confidence 99999999877789999999999998876666689999999999999999999999999999999999999999999998
Q ss_pred cCCCCCccchHHHHhhh--CCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHH
Q 013892 317 YVPEKKFHSFKKVSRSM--GYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILA 394 (434)
Q Consensus 317 ~~~~~~~~s~~~~~~~l--~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~ 394 (434)
|++. ++.++....... ....+..++++++||||.| |++|+|+||+++ .++.+++.+.+.. .+.+++.+.|.++
T Consensus 238 f~~~-~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~-~l~GlRiG~li~--~~~~l~~~~~~~~-~~~~~s~~~Q~a~ 312 (468)
T PLN02450 238 FDSP-GFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDL-GLPGFRVGAIYS--NDEMVVSAATKMS-SFGLVSSQTQYLL 312 (468)
T ss_pred cCCC-CcccHHHHhhhcccccCCCCCcEEEEEeccccC-CCCCccEEEEEE--CCHHHHHHHHHHh-hcCCCCHHHHHHH
Confidence 8764 355655443210 0001122689999999999 899999999986 2455677776654 3346789999999
Q ss_pred HHHcCCCC----CChHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPK----VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 395 ~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
..+|++.. ++++.++.|+++|+.+.+.|+++
T Consensus 313 ~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~ 347 (468)
T PLN02450 313 SALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA 347 (468)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999864 45677889999999999999876
No 45
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-40 Score=329.73 Aligned_cols=304 Identities=21% Similarity=0.260 Sum_probs=246.7
Q ss_pred hhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCH
Q 013892 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (434)
Q Consensus 63 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~ 142 (434)
+++..+.......+...+.++++. ...+|+++.|+|.. ..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~l~~~~~~~-----------------------------~~~~ 45 (386)
T PRK07550 4 PLIAALFPPPIPEVRAWLAGYDGA---------DGPLIDLSQAVPGY-----------------------------PPPP 45 (386)
T ss_pred hhhhhcCChHHHHHHHHHHHHhhc---------CCCeEEeCCCCCCC-----------------------------CCCH
Confidence 334433333333455555554432 25689999999875 2356
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcC
Q 013892 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (434)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~ 222 (434)
.+.+.+.+.+.. . ....|++..|.++||+++++++.+++|..+++++|++|+|+++++..++.+++ ++||+|+++.
T Consensus 46 ~~~~~~~~~~~~-~--~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~ 121 (386)
T PRK07550 46 ELLRALAEAAAD-P--AAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLA-GAGDEVILPL 121 (386)
T ss_pred HHHHHHHHHHhC-c--CCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhc-CCCCEEEEcC
Confidence 666766666643 1 36779999999999999999999999999999999999999999999999998 7999999999
Q ss_pred CCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc
Q 013892 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (434)
Q Consensus 223 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~ 302 (434)
|+|+.+...++..|++++.++++++++|.+|++++++++++ ++++|++++||||||.+++.+++++|+++|+++
T Consensus 122 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~ 195 (386)
T PRK07550 122 PWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP------RTRAIALVTPNNPTGVVYPPELLHELYDLARRH 195 (386)
T ss_pred CCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc------cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHc
Confidence 99999999999999999999998767888999999999976 789999999999999999999999999999999
Q ss_pred CCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-
Q 013892 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS- 381 (434)
Q Consensus 303 ~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~- 381 (434)
|++||+||+|.++.++... ..+... .. . .+.++|+++||||.| |++|+|+||+++ ++++++.+.+...
T Consensus 196 ~~~iI~Dd~y~~~~~~~~~-~~~~~~----~~-~-~~~~~i~~~S~SK~~-g~~G~RiG~i~~---~~~~~~~~~~~~~~ 264 (386)
T PRK07550 196 GIALILDETYRDFDSGGGA-PHDLFA----DP-D-WDDTLVHLYSFSKSY-ALTGHRVGAVVA---SPARIAEIEKFMDT 264 (386)
T ss_pred CeEEEEeccchhhccCCCC-Ccchhh----CC-C-ccccEEEEecchhhc-cCcccceEeeec---CHHHHHHHHHHHhh
Confidence 9999999999998664332 222211 10 0 122589999999999 899999999987 8899999888776
Q ss_pred cccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 382 VNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 382 ~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
...+++.++|.++..++++ .++.++.++.++++++.+.+.|++.
T Consensus 265 ~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (386)
T PRK07550 265 VAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARL 309 (386)
T ss_pred cccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5668899999999999976 3556677788888999898888765
No 46
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=7.8e-40 Score=328.51 Aligned_cols=276 Identities=24% Similarity=0.366 Sum_probs=235.9
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|+|+. ..++.+.+++.+.+... ...|++..|.++||+++
T Consensus 28 ~~~i~l~~~~p~~-----------------------------~~~~~~~~a~~~~~~~~----~~~Y~~~~g~~~lr~~i 74 (387)
T PRK07683 28 DNLISLTIGQPDF-----------------------------PTPSHVKEAAKRAITEN----YTSYTHNAGLLELRKAA 74 (387)
T ss_pred CCeEEecCCCCCC-----------------------------CCCHHHHHHHHHHHhcC----CCCCCCCCCCHHHHHHH
Confidence 4789999999885 23566777777777642 56799999999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
++++.+++|++++++ +|++|+|+++++.++++.++ ++||+|+++.|+|+.|...++..|++++.++.++ ++|.+|.+
T Consensus 75 a~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~ 152 (387)
T PRK07683 75 CNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTIL-EPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAE 152 (387)
T ss_pred HHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhC-CCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHH
Confidence 999998889889998 99999999999999999998 7999999999999999999999999999999875 46888999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
.+++.+++ +++++++++||||||.+++.+++++|+++|+++|++||+||+|+++.|++. ..++... .+
T Consensus 153 ~l~~~~~~------~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~----~~ 220 (387)
T PRK07683 153 ALENAITE------KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP--HTSIAHF----PE 220 (387)
T ss_pred HHHHhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC--cCChhhc----cC
Confidence 99998875 789999999999999999999999999999999999999999999888654 3344332 11
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP-KVGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~ 413 (434)
. ++ ++|+++||||.| |+||+|+||+++ ++++++.+.+... ...+++.+.|.++..++.+. .+.++.++.+++
T Consensus 221 ~-~~-~vi~~~s~SK~~-~~pGlRiG~i~~---~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 294 (387)
T PRK07683 221 M-RE-KTIVINGLSKSH-SMTGWRIGFLFA---PSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKK 294 (387)
T ss_pred C-cC-CeEEEeeccccc-cCccceeEEEEc---CHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 1 22 589999999999 899999999987 8999999987755 45577889999999888754 456677888999
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+|+.+.+.|++.
T Consensus 295 ~~~~~~~~l~~~ 306 (387)
T PRK07683 295 RRDYVYNRLISM 306 (387)
T ss_pred HHHHHHHHHHHc
Confidence 999999998764
No 47
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.5e-39 Score=326.53 Aligned_cols=278 Identities=24% Similarity=0.339 Sum_probs=234.5
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.+++++++|.|+. ..|+.+.+++.+.+.. ....|++..|.+++|+++
T Consensus 24 ~~~i~l~~g~p~~-----------------------------~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~i 70 (387)
T PRK07777 24 TGAVNLGQGFPDE-----------------------------DGPPEMLEAAQEAIAG----GVNQYPPGPGIPELRAAI 70 (387)
T ss_pred CCeEEccCCCCCC-----------------------------CCCHHHHHHHHHHHhc----CCCCCCCCCCCHHHHHHH
Confidence 3789999999986 2355677777666654 256799999999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCC-CCCCCCH
Q 013892 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA-TGWGLET 254 (434)
Q Consensus 177 a~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~ 254 (434)
++++.+++|.+++++ +|++|+|+++++..++..++ ++||+|+++.|+|+.|...++..|++++.++++++ ++|.+|+
T Consensus 71 a~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~ 149 (387)
T PRK07777 71 AAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLV-EPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDL 149 (387)
T ss_pred HHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCH
Confidence 999998889888886 79999999999999999988 79999999999999999999999999999999776 4788999
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhC
Q 013892 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~ 334 (434)
++|++.+++ ++++|++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++.. +.++... .
T Consensus 150 ~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~-~~~~~~~----~ 218 (387)
T PRK07777 150 DALRAAVTP------RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGAR-HLPLATL----P 218 (387)
T ss_pred HHHHHhcCc------ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCC-cccHhhC----C
Confidence 999998875 7899999999999999999999999999999999999999999999886542 3343321 1
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC-CCCChHHHHHHH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP-PKVGDESYESYC 412 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~ 412 (434)
+. .+ ++|+++||||.| |+||+|+||+++ ++++++.+.+... ...+++.+.|.++..++.. .++.++.++.++
T Consensus 219 ~~-~~-~~i~~~S~SK~~-g~~GlRiG~~~~---~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 292 (387)
T PRK07777 219 GM-RE-RTVTISSAAKTF-NVTGWKIGWACG---PAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQ 292 (387)
T ss_pred CC-cC-cEEEEeechhhc-cCcCceeEEEec---CHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 11 12 479999999999 899999999987 8899999887765 4456777888888887865 355677888999
Q ss_pred HHHHHHHHHHHHH
Q 013892 413 AERDGILSSLARR 425 (434)
Q Consensus 413 ~~r~~l~~~L~~~ 425 (434)
++++.+.+.|++.
T Consensus 293 ~~~~~l~~~L~~~ 305 (387)
T PRK07777 293 AKRDRLAAGLAEA 305 (387)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999875
No 48
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.2e-39 Score=331.33 Aligned_cols=259 Identities=24% Similarity=0.399 Sum_probs=222.3
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HcC
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHG 236 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~-~~g 236 (434)
...|.+..|.++||+++|+|+.+++| .++++++|++|+|+++++.+++..++ +|||.|+++.|+|+.|...+. ..|
T Consensus 88 ~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~-~pGD~Vlv~~P~Y~~f~~~~~~~~g 166 (447)
T PLN02607 88 NALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA-DPGDALLVPTPYYPGFDRDLRWRTG 166 (447)
T ss_pred hhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHhcCC
Confidence 45588899999999999999998877 36899999999999999999999998 899999999999999998887 479
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
+++++++++++++|.+|++++++++++++++|.++|+|+++|||||||.+++++++++|+++|+++|+++|+||+|.+++
T Consensus 167 ~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~ 246 (447)
T PLN02607 167 VKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSV 246 (447)
T ss_pred cEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 99999999887889999999999999988888899999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccchHHHHhhhCCCC-CCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHH
Q 013892 317 YVPEKKFHSFKKVSRSMGYGE-KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILAS 395 (434)
Q Consensus 317 ~~~~~~~~s~~~~~~~l~~~~-~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~ 395 (434)
|++. ++.++.++...++... ++ ++++++||||.| |++|+|+||++. .++++++.+.+.. .+.+++.+.|.++.
T Consensus 247 f~~~-~f~S~~s~~~~~~~~~~~~-~v~vi~s~SK~f-g~~GlRvG~ivs--~n~~l~~~~~~~~-~~~~~s~~~q~~~~ 320 (447)
T PLN02607 247 FSAS-EFVSVAEIVEARGYKGVAE-RVHIVYSLSKDL-GLPGFRVGTIYS--YNDKVVTTARRMS-SFTLVSSQTQHLLA 320 (447)
T ss_pred cCCC-CcccHHHHHhhcCCCCCcC-cEEEEEcchhcC-CCCcceEEEEEE--cCHHHHHHHHHHh-hcCCCCHHHHHHHH
Confidence 9764 3778776654432111 23 689999999999 899999999975 4777877776554 33357888999999
Q ss_pred HHcCCCCC----ChHHHHHHHHHHHHHHHHHHHH
Q 013892 396 LVMSPPKV----GDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 396 ~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+|+++++ +.+.+++++++++.+.+.|++.
T Consensus 321 ~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~ 354 (447)
T PLN02607 321 SMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA 354 (447)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99998754 3456777888888888888864
No 49
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-39 Score=328.23 Aligned_cols=276 Identities=23% Similarity=0.324 Sum_probs=238.1
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|+|+. .+|+.+.+++.+.+... ...|.+..|.++||+++
T Consensus 33 ~~~i~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~----~~~Y~~~~g~~~lr~~i 79 (391)
T PRK08361 33 ENVISLGIGEPDF-----------------------------DTPKNIKEAAKRALDEG----WTHYTPNAGIPELREAI 79 (391)
T ss_pred cCeEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHhcC----CCCCCCCCCcHHHHHHH
Confidence 4689999999886 33666777777776642 55698999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
|+++.+.+|.++++++|++|+|+++++.+++..++ ++||.|++++|+|..+...++..|++++.++++.+++|.+|+++
T Consensus 80 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 158 (391)
T PRK08361 80 AEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLL-EEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDE 158 (391)
T ss_pred HHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHH
Confidence 99999888988999999999999999999999998 79999999999999999999999999999999887788999999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++.+++ ++++++++|||||||.+++.+++++|+++|+++++++|+||+|.++.|++.. ..++... .
T Consensus 159 l~~~i~~------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~----~-- 225 (391)
T PRK08361 159 LLELITK------RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAK-HYPMIKY----A-- 225 (391)
T ss_pred HHHhccc------ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCC-CCCHhhc----C--
Confidence 9999876 7899999999999999999999999999999999999999999998886432 3333322 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCC---CChHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPK---VGDESYESYC 412 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~ 412 (434)
.+ ++|+++||||.| |++|+|+||+++ ++++++.+.+... ...+++.+.|.++..++++.. ++++.++.++
T Consensus 226 -~~-~~i~~~s~SK~~-~~~GlRiG~~~~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 299 (391)
T PRK08361 226 -PD-NTILANSFSKTF-AMTGWRLGFVIA---PEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYN 299 (391)
T ss_pred -CC-CEEEEecCchhc-CCcHhhhhhhcc---CHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHH
Confidence 22 479999999999 899999999987 8899998877765 455788899999999998753 3677888999
Q ss_pred HHHHHHHHHHHHH
Q 013892 413 AERDGILSSLARR 425 (434)
Q Consensus 413 ~~r~~l~~~L~~~ 425 (434)
++++.+.+.|++.
T Consensus 300 ~~~~~~~~~L~~~ 312 (391)
T PRK08361 300 ERRKLVLKRLKEM 312 (391)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999874
No 50
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-39 Score=327.19 Aligned_cols=306 Identities=25% Similarity=0.384 Sum_probs=256.0
Q ss_pred cChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCC
Q 013892 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (434)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (434)
+++++.+++......+...+.++... .++++++++|+|.. ..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~~-----------------------------~~ 45 (393)
T PRK05764 4 LSKRVSRVTPSATLAVTAKAKELKAQ---------GRDVISLGAGEPDF-----------------------------DT 45 (393)
T ss_pred hhhhhhhcCchHHHHHHHHHHHHHhc---------cCCEEEeCCCCCCC-----------------------------CC
Confidence 46777777766666666666655443 15799999999986 34
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
++.+.+++.+.+.+. ...|++..|..+||+++++++.+.+|..+++++|++|+|+++++..++..++ ++||.|++
T Consensus 46 ~~~~~~~~~~~~~~~----~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~-~~gd~vl~ 120 (393)
T PRK05764 46 PEHIKEAAIEALDDG----KTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALL-DPGDEVII 120 (393)
T ss_pred CHHHHHHHHHHHhcC----CCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhc-CCCCEEEe
Confidence 667778877777642 4469999999999999999999988888899999999999999999999988 79999999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
++|+|..|..+++..|++++.++++++++|.+|++.+++++++ ++++|++++|+||||.+++.+++++|+++|+
T Consensus 121 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~ 194 (393)
T PRK05764 121 PAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP------KTKALILNSPSNPTGAVYSPEELEAIADVAV 194 (393)
T ss_pred cCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHH
Confidence 9999999999999999999999998777889999999998865 7899999999999999999999999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh
Q 013892 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (434)
Q Consensus 301 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 380 (434)
+||+++|+||+|.++.|++.. +.++.....+ . .+ ++|+++||||.| |++|+|+||+++ ++++++++....
T Consensus 195 ~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~---~-~~-~~i~~~s~SK~~-~~~G~RiG~i~~---~~~~~~~~~~~~ 264 (393)
T PRK05764 195 EHDIWVLSDEIYEKLVYDGAE-FTSIASLSPE---L-RD-RTITVNGFSKAY-AMTGWRLGYAAG---PKELIKAMSKLQ 264 (393)
T ss_pred HCCcEEEEeccccceeeCCCC-cccHHHcCCC---C-cC-CEEEEecCcccc-cCccceeEEEec---CHHHHHHHHHHH
Confidence 999999999999998886532 3444333211 1 12 589999999999 899999999986 899999998877
Q ss_pred h-cccCCchHHHHHHHHHcC-CCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 381 S-VNLCSNISGQILASLVMS-PPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 381 ~-~~~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
. ...+++.+.|.++..+++ ..+++++.++.++++++.+.+.|++.
T Consensus 265 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (393)
T PRK05764 265 SHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEI 311 (393)
T ss_pred hhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 5 556889999999998887 34556678888888898898888875
No 51
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.3e-39 Score=328.18 Aligned_cols=281 Identities=25% Similarity=0.422 Sum_probs=232.5
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.++|+++.|+|...+. .+|+.+.+++.+.+... ...|++..|.++||+++
T Consensus 30 ~~~i~l~~g~p~~~~~--------------------------~p~~~~~~~~~~~~~~~----~~~Y~~~~g~~~lr~~i 79 (398)
T PRK08363 30 IKVIRLNIGDPVKFDF--------------------------QPPEHMKEAYCRAIKEG----HNYYGPSEGLPELREAI 79 (398)
T ss_pred CCeEEEeCCCCCcCCC--------------------------CCCHHHHHHHHHHHHcC----CCCCCCCCCcHHHHHHH
Confidence 5899999999963111 34677888777777542 45799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
++++.+++|+++++++|++|+|+++++.+++.+++ ++||.|+++.|+|+.|...++..|++++.++..++++|.+|++.
T Consensus 80 a~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~ 158 (398)
T PRK08363 80 VKREKRKNGVDITPDDVRVTAAVTEALQLIFGALL-DPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDD 158 (398)
T ss_pred HHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHH
Confidence 99999989999999999999999999999999998 79999999999999999999999999998843334568899999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++++++ ++++|+++|||||||.+++.+++++|+++|+++|+++|+||+|.++.|++. +.++..+ .
T Consensus 159 l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~--~~~~~~~----~-- 224 (398)
T PRK08363 159 IRKKITE------KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK--HVSPGSL----T-- 224 (398)
T ss_pred HHhhCCc------ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc--ccCHHHc----C--
Confidence 9998866 789999999999999999999999999999999999999999999888653 3443322 2
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh----cccCCchHHHHHHHHHcCC-CCCChHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS----VNLCSNISGQILASLVMSP-PKVGDESYESY 411 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~ 411 (434)
.+.++|+++||||.| +++|+|+||+++.+ ++++++.+..... ...+++.+.|.++..++.+ .+++++.++.+
T Consensus 225 -~~~~vi~~~SfSK~~-~~~GlRiG~~~~~~-~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~ 301 (398)
T PRK08363 225 -KDVPVIVMNGLSKVY-FATGWRLGYIYFVD-PEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKL 301 (398)
T ss_pred -cCCcEEEEecchhcc-CCccceEEEEEEeC-cHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHH
Confidence 122589999999998 78999999997523 5666666554322 2357899999999888875 46677888999
Q ss_pred HHHHHHHHHHHHHH
Q 013892 412 CAERDGILSSLARR 425 (434)
Q Consensus 412 ~~~r~~l~~~L~~~ 425 (434)
+++|+.+.+.|+++
T Consensus 302 ~~~~~~l~~~L~~~ 315 (398)
T PRK08363 302 KERRDYIYKRLNEI 315 (398)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999998764
No 52
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.7e-39 Score=333.82 Aligned_cols=259 Identities=22% Similarity=0.335 Sum_probs=217.9
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HcC
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHG 236 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~-~~g 236 (434)
...|++..|.++||++||+|+.+.+| +++++++|++|+|+++++..++..++ +|||.|+++.|+|+.|...++ ..|
T Consensus 87 ~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~-~pGD~Vlv~~P~Y~~~~~~~~~~~G 165 (496)
T PLN02376 87 IANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA-DPGDVFLIPSPYYAAFDRDLRWRTG 165 (496)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC-CCCCEEEECCCCccchHHHHHhhCC
Confidence 55799999999999999999998888 66899999999999999999999999 899999999999999999888 489
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
+++++++++.+++|++|++.++++++.+.+.+.++|+|+++|||||||.+++.+++++|+++|+++|++||+||+|.+++
T Consensus 166 ~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~ 245 (496)
T PLN02376 166 VEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATV 245 (496)
T ss_pred CEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccc
Confidence 99999999877789999999998876655445579999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccchHHHHhhhCCC--CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHH
Q 013892 317 YVPEKKFHSFKKVSRSMGYG--EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILA 394 (434)
Q Consensus 317 ~~~~~~~~s~~~~~~~l~~~--~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~ 394 (434)
|++. ++.++..+....+.. .++ ++++++||||.| |+||+|+||+++ .++.+++.+.+... ...++.+.|.++
T Consensus 246 f~~~-~~~si~~l~~~~~~~~~~~~-~v~vv~S~SK~~-glpGlRvG~li~--~~~~l~~~~~~~~~-~~~vs~~~Q~a~ 319 (496)
T PLN02376 246 FAGG-DFVSVAEVVNDVDISEVNVD-LIHIVYSLSKDM-GLPGFRVGIVYS--FNDSVVSCARKMSS-FGLVSSQTQLML 319 (496)
T ss_pred cCCC-CcccHHHhhccccccccCCC-eEEEEEeccccC-CCCcceEEEEEE--CCHHHHHHHHHHhh-cCCCCHHHHHHH
Confidence 8764 367776654432210 123 467899999999 899999999976 35667666655443 336889999999
Q ss_pred HHHcCCCCCC----hHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVG----DESYESYCAERDGILSSLARR 425 (434)
Q Consensus 395 ~~~l~~~~~~----~~~~~~~~~~r~~l~~~L~~~ 425 (434)
..++++.++. .+.++.++++++.+.+.|++.
T Consensus 320 ~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~ 354 (496)
T PLN02376 320 ASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA 354 (496)
T ss_pred HHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999886543 345778888888888888764
No 53
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-39 Score=325.27 Aligned_cols=277 Identities=23% Similarity=0.316 Sum_probs=236.3
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.++++|+.|.|.. .+|+.+.+++.+.+... ....|++..|.+++|+++
T Consensus 27 ~~~~~l~~g~~~~-----------------------------~~~~~~~~a~~~~~~~~---~~~~Y~~~~G~~~lr~~~ 74 (389)
T PRK05957 27 PGTISLGQGVVSY-----------------------------PPPPEAIEALNNFLANP---ENHKYQAVQGIPPLLEAI 74 (389)
T ss_pred CCeEEccCCCCCC-----------------------------CCCHHHHHHHHHHHhCC---CCCCCCCCCCCHHHHHHH
Confidence 3689999999885 35777888887776543 246899999999999999
Q ss_pred HHHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~-~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
++++.+.+|..++ +++|++|+|+++++..++..++ ++||.|++++|+|..+...++..|++++.++.+ .+|++|++
T Consensus 75 ~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~ 151 (389)
T PRK05957 75 TQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAIT-DPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPE 151 (389)
T ss_pred HHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHH
Confidence 9999998898777 7789999999999999999888 799999999999999999899999999999875 45799999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
++++++++ ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ++.+.... .+
T Consensus 152 ~l~~~i~~------~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~-~~~~~~~~----~~ 220 (389)
T PRK05957 152 AIEQAITP------KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV-KHFSPGSI----PG 220 (389)
T ss_pred HHHHhcCc------CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC-CccChhhC----CC
Confidence 99999876 799999999999999999999999999999999999999999999988653 23333222 11
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP-KVGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~ 413 (434)
...++|+++||||.| |++|+|+||+++ ++++++++.+... ...+++.+.|.++..+++++ .+.++.++.+++
T Consensus 221 --~~~~~i~~~S~SK~~-g~~GlRiG~~~~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 294 (389)
T PRK05957 221 --SGNHTISLYSLSKAY-GFASWRIGYMVI---PIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQ 294 (389)
T ss_pred --ccCcEEEEecchhhc-cCccceeEEEec---CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 122589999999999 899999999987 8999999988776 45678889999998888764 456778888999
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+|+.+.+.|++.
T Consensus 295 ~r~~l~~~L~~~ 306 (389)
T PRK05957 295 VRQILLKSLGQL 306 (389)
T ss_pred HHHHHHHHHHhc
Confidence 999999998864
No 54
>PRK07324 transaminase; Validated
Probab=100.00 E-value=4.7e-40 Score=328.39 Aligned_cols=269 Identities=20% Similarity=0.292 Sum_probs=230.9
Q ss_pred cccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHH
Q 013892 96 FDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDT 175 (434)
Q Consensus 96 ~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ 175 (434)
..+|+++++|+|++ ..|+.+ +++.+++... ...|++..|.++||++
T Consensus 25 ~~~~~~~~~~e~~~-----------------------------~~~~~~-~~~~~~~~~~----~~~Y~~~~G~~~lr~~ 70 (373)
T PRK07324 25 ESCIDSLTLEELLA-----------------------------LAGKNP-EAFYQELGQK----KLTYGWIEGSPEFKEA 70 (373)
T ss_pred cCCCCCCcHHHHHh-----------------------------ccCcch-HHHHHHHhcC----CccCCCCCCCHHHHHH
Confidence 35899999999987 335556 7777777653 5689999999999999
Q ss_pred HHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 176 IAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 176 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
||+++. .+++++|++|+|+++++.+++..++ ++||+|+++.|+|..+...++..|++++.++++++++|.+|++
T Consensus 71 ia~~~~-----~~~~~~vi~t~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~ 144 (373)
T PRK07324 71 VASLYQ-----NVKPENILQTNGATGANFLVLYALV-EPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLD 144 (373)
T ss_pred HHHHhc-----CCChhhEEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHH
Confidence 999983 2678999999999999999999998 7999999999999999999999999999999988778999999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
++++.+++ ++|+|++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. +.++...
T Consensus 145 ~l~~~~~~------~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~--~~s~~~~------ 210 (373)
T PRK07324 145 ELRRLVRP------NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS--TPSIADL------ 210 (373)
T ss_pred HHHHhCCC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC--CCChhhc------
Confidence 99988765 789999999999999999999999999999999999999999999888643 3443321
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP-KVGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~ 413 (434)
.+ ++|+++||||.| |++|+|+||+++ ++++++.+.+.+. ...+++.+.|.++..++++. +.+++.++.+++
T Consensus 211 -~~--~~I~~~s~SK~~-~~~G~RiG~i~~---~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~ 283 (373)
T PRK07324 211 -YE--KGISTNSMSKTY-SLPGIRVGWIAA---NEEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRT 283 (373)
T ss_pred -cC--CEEEEecchhhc-CCccceeEEEec---CHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 12 479999999999 899999999987 8999999998876 45688899999998888764 346677788888
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+++.+.+.|++.
T Consensus 284 ~~~~l~~~l~~~ 295 (373)
T PRK07324 284 NLAILDEWVAKE 295 (373)
T ss_pred HHHHHHHHHhcC
Confidence 888888888754
No 55
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2e-39 Score=330.52 Aligned_cols=278 Identities=24% Similarity=0.403 Sum_probs=239.7
Q ss_pred CCccccccc---CCCCCHHHHHHHH-HHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 128 PSILDRSET---QGLFSADSIERAW-QILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 128 p~~l~~~~~---~~~~p~~v~~~~~-~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
+..++|+.+ +..+|.+.++++. +.++.........|.+..|.++||++|++++....|+.+++++|++|+|+++++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 556666655 3457877777754 444433331267899999999999999999997889999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-cCCCC
Q 013892 204 HMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNP 282 (434)
Q Consensus 204 ~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~-~p~NP 282 (434)
.++++.++ +|||.|++++|+|.....+++.+|++++.+|+|++ ++|+|.|++.++.. ++|++|++ +-|||
T Consensus 169 ~l~~~~l~-~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~---G~~~e~le~~~~~~-----~~k~~y~~P~~qNP 239 (459)
T COG1167 169 DLLLRLLL-DPGDTVLVEDPTYPGALQALEALGARVIPVPVDED---GIDPEALEEALAQW-----KPKAVYVTPTFQNP 239 (459)
T ss_pred HHHHHHhC-CCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCC---CCCHHHHHHHHhhc-----CCcEEEECCCCCCC
Confidence 99999999 79999999999999999999999999999999976 99999999999875 79999988 88999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEE
Q 013892 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (434)
Q Consensus 283 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~ 362 (434)
||.++|.++.++|+++|++||++||+||+|+++.|++.. ..++.... .+.+||+++||||+++ ||+|+||
T Consensus 240 tG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p-~~~l~~ld-------~~~rViy~gSFSK~l~--PglRlG~ 309 (459)
T COG1167 240 TGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPP-PPPLKALD-------APGRVIYLGSFSKTLA--PGLRLGY 309 (459)
T ss_pred CCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCC-CCChHhhC-------CCCCEEEEeeehhhcc--cccceee
Confidence 999999999999999999999999999999999998753 33443332 2348999999999995 9999999
Q ss_pred EEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC---CCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 363 MEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP---KVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+++ ++++++.+...+. ...+++.+.|.++...+.+. +++.+++..|+++|+.+.+.|++...
T Consensus 310 vv~---p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~ 375 (459)
T COG1167 310 VVA---PPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLP 375 (459)
T ss_pred eeC---CHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 988 9999999988877 77789999988888888753 56788999999999999999998753
No 56
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=9.8e-39 Score=320.98 Aligned_cols=278 Identities=25% Similarity=0.350 Sum_probs=234.5
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|+|+. ..|+.+.+++.+.+... ...|++..|.++||+++
T Consensus 30 ~~~i~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~----~~~Y~~~~g~~~lr~~i 76 (391)
T PRK07309 30 PGILKLTLGEPDF-----------------------------TTPDHVKEAAKRAIDAN----QSHYTGMAGLLELRQAA 76 (391)
T ss_pred CCeEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHhcC----CCCCCCCCCcHHHHHHH
Confidence 4689999999885 34666777777776542 45699999999999999
Q ss_pred HHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
++++.+++|+.+++ ++|++|+|+++++.+++..++ ++||+|++++|+|+.|...++..|++++.++.++ ++|.+|++
T Consensus 77 a~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~ 154 (391)
T PRK07309 77 ADFVKEKYNLDYAPENEILVTIGATEALSASLTAIL-EPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPE 154 (391)
T ss_pred HHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHH
Confidence 99999988988775 789999999999999999998 7999999999999999999999999999999864 46789999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
.|+++++.. ..++++|++++||||||.+++.+++++|+++|++||+++|+||+|.++.|++. ++.++....
T Consensus 155 ~l~~~~~~~---~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~-~~~~~~~~~----- 225 (391)
T PRK07309 155 MLEKAILEQ---GDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE-PHVSIAEYL----- 225 (391)
T ss_pred HHHHHhhcc---CCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC-CCCCHHHhc-----
Confidence 999988642 11589999999999999999999999999999999999999999999998653 244544321
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCC-CChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPK-VGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~ 413 (434)
++ ++|+++||||.| |++|+|+||+++ ++++++.+.+... ...+++.+.|.++..++++.. +....++.|++
T Consensus 226 --~~-~~i~~~S~SK~~-g~~GlRvG~~v~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 298 (391)
T PRK07309 226 --PD-QTILINGLSKSH-AMTGWRIGLIFA---PAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIK 298 (391)
T ss_pred --cC-CEEEEecChhhc-cCccceeEEEEe---CHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHH
Confidence 22 589999999999 899999999987 8999999987654 455789999999999998743 34566788999
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+|+.+.+.|++.
T Consensus 299 ~~~~~~~~l~~~ 310 (391)
T PRK07309 299 RRDYIIEKMTDL 310 (391)
T ss_pred HHHHHHHHHHHC
Confidence 999999988765
No 57
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=4.6e-39 Score=323.85 Aligned_cols=279 Identities=24% Similarity=0.344 Sum_probs=232.0
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.++++++.|+|.. ..|+.+++++.+.+... ....|++..|.++||+++
T Consensus 29 ~~~i~l~~g~p~~-----------------------------~~~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~ai 76 (395)
T PRK08175 29 EDIIDFSMGNPDG-----------------------------PTPPHIVEKLCEVAQRP---DTHGYSTSRGIPRLRRAI 76 (395)
T ss_pred CCeEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHhCC---CcCCCCCCCCCHHHHHHH
Confidence 4789999999986 23555777766665432 267899999999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
++|+.+++|+.++++ +|++|+|+++++..++..++ ++||+|++++|+|+.+...++..|++++.+++++++. +.+
T Consensus 77 a~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~ 152 (395)
T PRK08175 77 SRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATL-DHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFN 152 (395)
T ss_pred HHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHH
Confidence 999999889988887 79999999999999999998 7999999999999999999999999999999987643 478
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+++++++.. ..++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++.. ..++..+ .
T Consensus 153 ~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~-~~~~~~~----~- 223 (395)
T PRK08175 153 ELERAIRES---YPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWK-APSIMQV----P- 223 (395)
T ss_pred HHHHHHhhc---cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCC-CcchhcC----C-
Confidence 888877641 126889999999999999999999999999999999999999999999886532 3343322 1
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC-CCCChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP-PKVGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~ 413 (434)
...+ ++|+++||||.| |+||+|+||+++ ++++++++.+... ...+++.+.|.++..++++ .++++..++.|++
T Consensus 224 ~~~~-~~i~~~S~SK~~-g~pGlRiG~~~~---~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 298 (395)
T PRK08175 224 GAKD-VAVEFFTLSKSY-NMAGWRIGFMVG---NPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKR 298 (395)
T ss_pred Cccc-CEEEEeeccccc-cCcchhheeeeC---CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 1123 578999999999 899999999987 8999999988776 4556778888888888865 3457778899999
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+++.+.+.|++.
T Consensus 299 ~~~~~~~~L~~~ 310 (395)
T PRK08175 299 RRDVLVKGLHEA 310 (395)
T ss_pred HHHHHHHHHHHc
Confidence 999999999875
No 58
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=7.7e-39 Score=322.99 Aligned_cols=284 Identities=21% Similarity=0.316 Sum_probs=235.5
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.+++++++|+|.+.+.. .+++.+.+++.+.+... ....|++..|..++|+++
T Consensus 31 ~~~i~l~~g~p~~~~~~-------------------------~~~~~~~~~~~~~l~~~---~~~~Y~~~~g~~~lr~~i 82 (403)
T TIGR01265 31 KPIIPLSHGDPSVFGNL-------------------------RTDPEAEEAVKDALRSG---KFNGYAPSVGALAAREAV 82 (403)
T ss_pred CCeEEeCCCCCCccCCC-------------------------CCCHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHH
Confidence 68999999999742211 34677888887777543 245799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
++++..+++..+++++|++|+|+++++.+++++++ ++||+|+++.|+|+.|...++..|++++.++++.+++|++|++.
T Consensus 83 a~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 161 (403)
T TIGR01265 83 AEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALA-NPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDG 161 (403)
T ss_pred HHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhC-CCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHH
Confidence 99999888888899999999999999999999998 79999999999999999999999999999998766778999999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++.+++ +++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ++.++..+ .
T Consensus 162 l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~----~-- 228 (403)
T TIGR01265 162 LEALADE------KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDA-PFIPMASF----A-- 228 (403)
T ss_pred HHHHhCc------CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC-Cccchhhh----c--
Confidence 9998865 788999999999999999999999999999999999999999999988764 24444332 2
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCH-----HHHHHHHHHhhcccCCchHHHHHHHHHcCC--CCCChHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-----EVREQIYKVASVNLCSNISGQILASLVMSP--PKVGDESYE 409 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~ 409 (434)
++.++|+++||||.| ++||+|+||+++.. ++ ++++.+.+......+++.+.|.++..++.+ ..+.++.++
T Consensus 229 -~~~~vi~~~S~SK~~-~~pGlRiG~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 305 (403)
T TIGR01265 229 -SIVPVLSLGGISKRW-VVPGWRLGWIIIHD-PHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKIS 305 (403)
T ss_pred -cCCcEEEEeeccccc-CCCcceEEEEEEeC-chhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHH
Confidence 223589999999998 78999999998622 21 244445544434457899999999988864 245677888
Q ss_pred HHHHHHHHHHHHHHHH
Q 013892 410 SYCAERDGILSSLARR 425 (434)
Q Consensus 410 ~~~~~r~~l~~~L~~~ 425 (434)
.++++|+.+.+.|+.+
T Consensus 306 ~~~~~~~~l~~~L~~~ 321 (403)
T TIGR01265 306 VLKSNAELCYEELKDI 321 (403)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999988764
No 59
>PLN02397 aspartate transaminase
Probab=100.00 E-value=5.7e-39 Score=325.27 Aligned_cols=254 Identities=19% Similarity=0.179 Sum_probs=194.3
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCE-----EEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI-----FLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL 234 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i-----~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~ 234 (434)
..+|++..|.++||+++++|+.++.+...++++| +.++|+.+ +...+..++ .|||+|++++|+|+.|...++.
T Consensus 84 ~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~~-~pGd~Vlv~~P~y~~y~~~~~~ 161 (423)
T PLN02397 84 NKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLR-LGAEFLARF-YPGSTIYIPNPTWGNHHNIFRD 161 (423)
T ss_pred CCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHH-HHHHHHHHh-CCCCEEEEeCCCchhHHHHHHH
Confidence 5689999999999999999997665433333443 33444433 333333444 5999999999999999999999
Q ss_pred cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 013892 235 HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
.|++++.+++..+++|++|++.+++.++.+ ..+++++++++||||||.+++.+++++|+++|++||++||+||+|.+
T Consensus 162 ~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~ 238 (423)
T PLN02397 162 AGVPVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQG 238 (423)
T ss_pred cCCeEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCC
Confidence 999999999854446899999999888643 12577888889999999999999999999999999999999999999
Q ss_pred CccCCC-CCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHH----HHHHHhh-cccCCch
Q 013892 315 NVYVPE-KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE----QIYKVAS-VNLCSNI 388 (434)
Q Consensus 315 ~~~~~~-~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~----~l~~~~~-~~~~~~~ 388 (434)
+.|++. .++.++..... . .+ ++|+++||||+| +++|||+||+++...++++++ .+.+... .+.+++.
T Consensus 239 l~~~~~~~~~~~~~~~~~----~-~~-~vI~~~SfSK~~-~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (423)
T PLN02397 239 FASGDLDADAQSVRMFVE----D-GH-EILVAQSYAKNM-GLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPI 311 (423)
T ss_pred ccCCchhhhhHHHHHHHh----c-CC-cEEEEEECcccC-CCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcH
Confidence 998642 12233322211 1 12 489999999999 899999999963333666544 3444443 4567889
Q ss_pred HHHHHHHHHcCCCC----C---ChHHHHHHHHHHHHHHHHHHHH
Q 013892 389 SGQILASLVMSPPK----V---GDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 389 ~~q~~~~~~l~~~~----~---~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.|.++..+|++++ + .++.++.|+++|+.+.+.|+++
T Consensus 312 ~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 312 HGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998742 2 4567789999999999999886
No 60
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-38 Score=320.34 Aligned_cols=277 Identities=31% Similarity=0.438 Sum_probs=231.6
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.++++++.|.|.. .+|+.+.+++.+... ....|++..|.+++|+++
T Consensus 30 ~~~i~l~~~~~~~-----------------------------~~~~~~~~a~~~~~~-----~~~~Y~~~~g~~~lr~~i 75 (397)
T PRK07568 30 IKVYHLNIGQPDI-----------------------------KTPEVFFEAIKNYDE-----EVLAYSHSQGIPELREAF 75 (397)
T ss_pred CCEEEecCCCCCC-----------------------------CCCHHHHHHHHHHhc-----CCcCcCCCCCCHHHHHHH
Confidence 4689999999875 346667777655432 256799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCC-CHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGL-ETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~-d~~ 255 (434)
++++. .+|.++++++|++|+|+++++..++..++ ++||+|++++|+|..|...++..|++++.++++.+++|.+ +++
T Consensus 76 a~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~ 153 (397)
T PRK07568 76 AKYYK-KWGIDVEPDEILITNGGSEAILFAMMAIC-DPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKE 153 (397)
T ss_pred HHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhc-CCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHH
Confidence 99998 57888999999999999999999999988 7999999999999999999999999999999975556664 689
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+|++++++ ++++|+++||+||||.+++.+++++|+++|+++|++||+||+|.++.|++. ++.++... ..
T Consensus 154 ~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~-~~~s~~~~----~~ 222 (397)
T PRK07568 154 EIEKLITP------KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGL-KYTSALSL----EG 222 (397)
T ss_pred HHHHhcCc------cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCC-CccChhhc----CC
Confidence 99988866 789999999999999999999999999999999999999999999888654 24444332 11
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCC-CCChHHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPP-KVGDESYESYCAE 414 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~ 414 (434)
..+ ++|+++||||.| |+||+|+||+++ .++++++.+.+......+++.+.|.++..+++.. +++++.++.|+++
T Consensus 223 ~~~--~~i~~~S~SK~~-~~~G~R~G~~~~--~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 297 (397)
T PRK07568 223 LED--RVIIIDSVSKRY-SACGARIGCLIS--KNKELIAAAMKLCQARLSPPTLEQIGAAALLDTPESYFDEVREEYKKR 297 (397)
T ss_pred CcC--CEEEEecchhhc-cCCCcceEEEec--CCHHHHHHHHHHhhccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 112 589999999999 889999999975 3578888887665444588999999999999754 4567788899999
Q ss_pred HHHHHHHHHHH
Q 013892 415 RDGILSSLARR 425 (434)
Q Consensus 415 r~~l~~~L~~~ 425 (434)
|+.+.+.|+++
T Consensus 298 ~~~l~~~L~~~ 308 (397)
T PRK07568 298 RDILYEELNKI 308 (397)
T ss_pred HHHHHHHHhcC
Confidence 99999999764
No 61
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=5.4e-39 Score=319.62 Aligned_cols=287 Identities=27% Similarity=0.468 Sum_probs=239.5
Q ss_pred cceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHH-HHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQ-ILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 98 ~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~-~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
++|+++.|++....+.|. ++++++++.+ ..... ....|++..|.++||+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~i 53 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPP-------------------------PPAAIKAAIRGAATSS---SFLGYPPPQGYPELREAI 53 (363)
T ss_dssp TEEESSSSSTSSTTSSHH-------------------------HHHHHHHHHHHHHHHT---GCTSSTCTTHHHHHHHHH
T ss_pred CEEEEECCCCCCcccccc-------------------------hHHHHHHHHHHhhccc---ccccCCCchhhHHHHHHH
Confidence 689999999998555433 5556666655 22222 378999999999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHH-hcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCH
Q 013892 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLL-IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLET 254 (434)
Q Consensus 177 a~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l-~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (434)
|+++.+.+|+.++++ +|++++|+.+++..++..+ . ++||+|++++|+|+.|...++..|+++++++++.+++|++|+
T Consensus 54 a~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~-~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 132 (363)
T PF00155_consen 54 ADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKI-NPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDP 132 (363)
T ss_dssp HHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHS-STTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETH
T ss_pred HHHhhhccCcccccceEEEEecccccchhhhhhcccc-cccccceecCCccccccccccccCceeeeccccccccccccc
Confidence 999998889999999 9999999999999999988 6 699999999999999999999999999999998778899999
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhC
Q 013892 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~ 334 (434)
++|++.+++...++.++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++.. +.+. ...+.
T Consensus 133 ~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~-~~~~---~~~~~ 208 (363)
T PF00155_consen 133 EALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPD-FGPI---RSLLD 208 (363)
T ss_dssp HHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSH-THHH---HGHHT
T ss_pred cccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCc-cCcc---ccccc
Confidence 9999999986555545789999999999999999999999999999999999999999999888642 2221 12222
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCC----CChHHHHH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPK----VGDESYES 410 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~ 410 (434)
...+ +|+++||||.| |++|+|+||+++ ++++++.+.+....+.. +.+.|.++..++.+.. +.++.++.
T Consensus 209 -~~~~--vi~~~S~SK~~-g~~GlRvG~i~~---~~~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (363)
T PF00155_consen 209 -EDDN--VIVVGSLSKSF-GLPGLRVGYIVA---PPELIERLRRFQRSGLS-SSPMQAAAAAALSDPELVEKWLEELRER 280 (363)
T ss_dssp -TTST--EEEEEESTTTT-TSGGGTEEEEEE---EHHHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cccc--ceeeeeccccc-cccccccccccc---hhhhhhhhhhccccccc-cchhhHHHHHhhhcccccccccccchhh
Confidence 2233 89999999999 899999999988 89999999988775544 8888888888887753 66778888
Q ss_pred HHHHHHHHHHHHHHH
Q 013892 411 YCAERDGILSSLARR 425 (434)
Q Consensus 411 ~~~~r~~l~~~L~~~ 425 (434)
++++++.+.+.|++.
T Consensus 281 l~~~~~~l~~~L~~~ 295 (363)
T PF00155_consen 281 LRENRDLLREALEEI 295 (363)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888888888765
No 62
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.5e-39 Score=319.00 Aligned_cols=264 Identities=16% Similarity=0.233 Sum_probs=220.6
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+|+.|++.+ ++|+.+++++.+.+.+ ...| |..|.++||+++
T Consensus 29 ~~~i~l~~nen~~-----------------------------~~~~~v~~a~~~~~~~-----~~~Y-p~~g~~~Lr~ai 73 (366)
T PRK01533 29 HSFVKLASNENPF-----------------------------GCSPRVLDELQKSWLD-----HALY-PDGGATTLRQTI 73 (366)
T ss_pred CceEEeCCCCCCC-----------------------------CCCHHHHHHHHHHHHh-----cCcC-CCCCHHHHHHHH
Confidence 4688888888776 6788899988877654 2346 467899999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
|+++ ++++++|++|+|+++++.+++++++ ++||.|++++|+|+.|...++..|++++.+++++ +++|+++
T Consensus 74 a~~~------~~~~~~I~vt~Gs~e~i~~~~~~l~-~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~---~~~d~~~ 143 (366)
T PRK01533 74 ANKL------HVKMEQVLCGSGLDEVIQIISRAVL-KAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNN---GVYDLDE 143 (366)
T ss_pred HHHh------CCCcceEEECCCHHHHHHHHHHHhc-CCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCC---CCcCHHH
Confidence 9997 4689999999999999999999998 7999999999999999999999999999999853 4799999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
|++++++ ++++++++|||||||.+++.+++++|+++|++++ ++|+||+|.++.+.+. ..+.... +. .
T Consensus 144 l~~~~~~------~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~--~~~~~~~---~~-~ 210 (366)
T PRK01533 144 ISSVVDN------DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD--FPETLPL---LE-K 210 (366)
T ss_pred HHHHhCc------CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc--CcchhHH---hc-c
Confidence 9998866 7899999999999999999999999999998866 6777999999776542 2222222 22 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
++ ++|+++||||.| |++|+|+||+++ ++++++.+.+.... .+++.++|.++..++++.++.++.++.++++|+
T Consensus 211 ~~--~vi~~~SfSK~~-~l~GlRiG~~i~---~~~~~~~l~~~~~~-~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~ 283 (366)
T PRK01533 211 HK--NILVLRTFSKAY-GLASFRVGYAVG---HEELIEKLNVVRLP-FNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLR 283 (366)
T ss_pred CC--CEEEEeCchHHh-cChHHHHhHHhC---CHHHHHHHHHhcCC-CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 22 589999999999 899999999987 89999999887644 589999999999999876666677778888888
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|+++
T Consensus 284 ~~~~~l~~~ 292 (366)
T PRK01533 284 QYESFCKEN 292 (366)
T ss_pred HHHHHHHhC
Confidence 887777654
No 63
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=5.7e-38 Score=316.59 Aligned_cols=301 Identities=23% Similarity=0.319 Sum_probs=230.2
Q ss_pred Chhhhcccc-cccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCC
Q 013892 62 NPKVLKCEY-AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (434)
Q Consensus 62 ~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (434)
|++..++.. .++..+..++.+.+++ .|..++|+++.|+|.. .+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~l~~~~~~~-----------------------------~~ 47 (402)
T TIGR03542 4 NPHFLKLKSSYLFSEINRRVNEFRKK-------HPSADIIRLGIGDTTQ-----------------------------PL 47 (402)
T ss_pred CCCccccCcchHHHHHHHHHHHHHhc-------cCCCCeEEcCCCCCCC-----------------------------CC
Confidence 445555553 3444556666665543 2446899999999886 45
Q ss_pred CHHHHHHHHHHHHcCCC-CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEE
Q 013892 141 SADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vl 219 (434)
|+.+.+++.+.+.+... .....|.+..|.++||+++|+++.+. .+++++|++|+|+++++..++ .++ .+||+|+
T Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~Ga~~al~~l~-~l~-~~gd~Vl 122 (402)
T TIGR03542 48 PASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISDGAKCDVFRLQ-SLF-GSDNTVA 122 (402)
T ss_pred CHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECCCcHHHHHHHH-Hhc-CCCCEEE
Confidence 77788888887765321 12457999999999999999986432 378999999999999999875 455 6999999
Q ss_pred EcCCCChhHHHHHHHcCC-----------eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCC
Q 013892 220 CPIPQYPLYSASIALHGG-----------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (434)
Q Consensus 220 v~~p~y~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~ 288 (434)
+++|+|..|...++..|+ ++++++++++++|.+|++.. . ++++|+++|||||||.+++
T Consensus 123 v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~------~~~~i~l~nP~NPTG~~~s 191 (402)
T TIGR03542 123 VQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE-----P------KIDIIYLCSPNNPTGTVLT 191 (402)
T ss_pred EeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCcccc-----C------CceEEEEeCCCCCCCccCC
Confidence 999999999999999999 99999987666677664321 1 6899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecC
Q 013892 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (434)
Q Consensus 289 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~ 368 (434)
.+++++|+++|+++|++||+||+|.++.+++.. ..++.. +.. ..+ ++|+++||||.| |+||+|+||+++
T Consensus 192 ~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~-~~~~~~----~~~-~~~-~vi~~~SfSK~~-g~pGlRiG~~i~--- 260 (402)
T TIGR03542 192 KEQLKELVDYANEHGSLILFDAAYSAFISDPSL-PHSIFE----IPG-AKE-CAIEFRSFSKTA-GFTGVRLGWTVV--- 260 (402)
T ss_pred HHHHHHHHHHHHHcCeEEEEEchhhhhccCCCC-Ccchhh----CCC-Ccc-cEEEEecCcccc-CCCCcceEEEEe---
Confidence 999999999999999999999999998876531 222222 221 112 589999999999 899999999987
Q ss_pred CHHHH--------HHHHHHh-hcccCCchHHHHHHHHHcCCCC--CChHHHHHHHHHHHHHHHHHHHH
Q 013892 369 SAEVR--------EQIYKVA-SVNLCSNISGQILASLVMSPPK--VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 369 ~~~~~--------~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++++ +.+.+.. ....+++.+.|.++..++.+.. +..+.++.|+++|+.+.+.|++.
T Consensus 261 ~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 328 (402)
T TIGR03542 261 PKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA 328 (402)
T ss_pred cHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77776 2222222 2344688899999888887643 34566788899999999998875
No 64
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.6e-38 Score=323.50 Aligned_cols=250 Identities=16% Similarity=0.170 Sum_probs=210.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEc
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~ 221 (434)
+.+.+++.+.... ...|++..|.++||+++++|+.+..+ .+++|++|+|+++++.+++++++ ++||.|+++
T Consensus 101 p~~~~~~~~~~~~-----~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~~~~~~l~-~pgd~Vlv~ 171 (431)
T PRK15481 101 PDLSRYFARLSRT-----PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIERLLCAHL-LPGDSVAVE 171 (431)
T ss_pred HHHHHHHHHhhhh-----hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHHHHHHHhC-CCCCEEEEe
Confidence 4445554444332 45799999999999999999865432 35699999999999999999998 799999999
Q ss_pred CCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-cCCCCCccCCCHHHHHHHHHHHH
Q 013892 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 222 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
+|+|+.|...++..|++++.++++++ ++|++.|+++++. ++++++++ |||||||.+++.+++++|+++|+
T Consensus 172 ~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~------~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~ 242 (431)
T PRK15481 172 DPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQ------GARAVILTPRAHNPTGCSLSARRAAALRNLLA 242 (431)
T ss_pred CCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhc------CCCEEEECCCCCCCCCccCCHHHHHHHHHHHH
Confidence 99999999999999999999999754 6899999998876 68999998 99999999999999999999999
Q ss_pred Hc-CCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH
Q 013892 301 KE-GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (434)
Q Consensus 301 ~~-~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 379 (434)
++ +++||+||+|.++.+.+. .+.. .. . .+ ++|+++||||.| | ||+|+||+++ ++++++.+.+.
T Consensus 243 ~~~~~~ii~De~Y~~~~~~~~---~~~~---~~---~-~~-~vi~~~SfSK~~-~-~GlRiG~~i~---~~~~~~~~~~~ 306 (431)
T PRK15481 243 RYPQVLVIIDDHFALLSSSPY---HSVI---PQ---T-TQ-RWALIRSVSKAL-G-PDLRLAFVAS---DSATSARLRLR 306 (431)
T ss_pred hcCCceEEecCchhhhccCCC---CCCC---cC---C-CC-CEEEEeeecccc-C-CCceeEEEeC---CHHHHHHHHHH
Confidence 99 999999999999876432 2211 11 1 12 589999999999 7 9999999987 89999999776
Q ss_pred hh-cccCCchHHHHHHHHHcCCCC---CChHHHHHHHHHHHHHHHHHHHH
Q 013892 380 AS-VNLCSNISGQILASLVMSPPK---VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 380 ~~-~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.. ...+++.+.|.++..++++.. ++++.++.|+++|+.+.+.|++.
T Consensus 307 ~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~ 356 (431)
T PRK15481 307 LNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY 356 (431)
T ss_pred HhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 55 345789999999999998864 36778999999999999999875
No 65
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4e-38 Score=314.72 Aligned_cols=261 Identities=18% Similarity=0.243 Sum_probs=208.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhc--CCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARD--GFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~--g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd 216 (434)
.+|+.+++++.+.+.... ....|++ .|.++||++||+|+.+++ |+.+++++|++|+|+++++..++.+++ .+||
T Consensus 41 ~~~~~~~~~~~~~~~~~~--~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~-~~g~ 116 (374)
T PRK02610 41 DLPPDLKQKLAWLYQQGI--ESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATC-LGGE 116 (374)
T ss_pred CCCHHHHHHHHHHHhhcc--cccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHc-CCCC
Confidence 678889999888776521 1356865 799999999999998876 567899999999999999998888777 5775
Q ss_pred -EEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHH
Q 013892 217 -GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (434)
Q Consensus 217 -~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i 295 (434)
.|++++|+|+.|...++..|++++.+++++ ++|++|+++|++++++.. ..++++|+++|||||||.+++.+++++|
T Consensus 117 ~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~NPTG~~~s~~~l~~l 193 (374)
T PRK02610 117 GSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPNSPTGNPLTAAELEWL 193 (374)
T ss_pred CeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHHHHHHHHHhhc--CCCceEEEEeCCCCCCCCCCCHHHHHHH
Confidence 899999999999999999999999999864 358999999999886411 1178999999999999999999999999
Q ss_pred HHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHH
Q 013892 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (434)
Q Consensus 296 ~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 375 (434)
+++| ++++||+||+|.++.+. ..+ ..+. .++ ++|+++||||.| |++|+|+||+++ ++++++.
T Consensus 194 ~~~~--~~~~iI~De~Y~~~~~~-----~~~----~~~~-~~~--~~ivi~SfSK~~-g~~GlRiG~~v~---~~~l~~~ 255 (374)
T PRK02610 194 RSLP--EDILVVIDEAYFEFSQT-----TLV----GELA-QHP--NWVILRTFSKAF-RLAAHRVGYAIG---HPELIAV 255 (374)
T ss_pred Hhcc--CCcEEEEeccccccCcc-----chH----HHHh-cCC--CEEEEEecchhc-cCcccceeeeec---CHHHHHH
Confidence 9876 49999999999996431 111 1122 123 378899999999 899999999987 9999999
Q ss_pred HHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 376 IYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 376 l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.+... ..+.+.+.|.++..++++.+...+..+.+.++|+.+.+.|+++
T Consensus 256 l~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 304 (374)
T PRK02610 256 LEKVRL-PYNLPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQEL 304 (374)
T ss_pred HHHhcC-CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 988764 3467889999999999865333333444455677777777653
No 66
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-38 Score=324.00 Aligned_cols=267 Identities=18% Similarity=0.218 Sum_probs=207.4
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.++|++++|+|++ ..|+.+.+ +.+.+.. . .|+++.|.+++|++|
T Consensus 100 ~~~i~l~~g~p~~-----------------------------~~~~~v~e-~~~~~~~-----~-~Y~~~~g~~~lreai 143 (527)
T PRK09275 100 RDAVSYVRDQLGF-----------------------------DADEFVYE-LVDGIIG-----D-NYPVPDRMLKHTEKI 143 (527)
T ss_pred HHHHhhcCCCCCC-----------------------------CCCHHHHH-HHHHHhc-----C-CCCCCCCCHHHHHHH
Confidence 3578888888887 34555666 4454431 2 499999999999999
Q ss_pred HHHHHhh-cCCCC-C--CCCEEEcCChHHHHHHHHHH-----HhcCCCCEEEEcCCCChhHHHHHHHcC--CeEEEEecC
Q 013892 177 AAGIEAR-DGFPA-D--PNDIFLTDGASPAVHMMMQL-----LIRSENDGILCPIPQYPLYSASIALHG--GTLVPYYLD 245 (434)
Q Consensus 177 a~~~~~~-~g~~~-~--~~~i~~t~G~~~al~~~l~~-----l~~~~gd~Vlv~~p~y~~~~~~~~~~g--~~~~~~~~~ 245 (434)
++++.++ .+... . .++|++|+|+++++..++.+ ++ +|||+|++++|+|+.|...++..| +++++++.+
T Consensus 144 a~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll-~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~ 222 (527)
T PRK09275 144 VKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLL-KAGDKIALMTPIFTPYLEIPELPRYDLEVVHINAD 222 (527)
T ss_pred HHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcC-CCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecC
Confidence 9966543 33222 2 34899999999999999886 46 799999999999999999988875 556666666
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEccCCCCCccCCCCCc
Q 013892 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK--EGLVLLADEVYQENVYVPEKKF 323 (434)
Q Consensus 246 ~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~ 323 (434)
++++|.+|+++|++++++ ++|+|+++|||||||.+++.+++++|+++|++ ++++||+||+|.++.+ . +
T Consensus 223 ~~~~f~~d~~~l~~~~~~------~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~--~ 292 (527)
T PRK09275 223 EENEWQYPDSELEKLRDP------SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD--D--F 292 (527)
T ss_pred cccCCCCCHHHHHhhcCC------CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc--c--c
Confidence 677899999999998765 89999999999999999999999999999965 4999999999999764 2 4
Q ss_pred cchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH-----HHHHH----------------------
Q 013892 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE-----VREQI---------------------- 376 (434)
Q Consensus 324 ~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~-----~~~~l---------------------- 376 (434)
.++.... ++ ++|+++||||.| |++|||+||+++ +++ +++.+
T Consensus 293 ~s~~~~~-------~~-~~I~v~SfSK~f-~mtG~RlG~i~~---~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~ 360 (527)
T PRK09275 293 RSLFAVL-------PY-NTILVYSFSKYF-GATGWRLGVIAL---HEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKL 360 (527)
T ss_pred cCHHHhC-------CC-CEEEEeehhhhc-cCcHhHHhhhhc---CchhHHHHHHHhccHHHHHHHHhhhhhccCCcchh
Confidence 4543321 22 589999999999 899999999976 544 33222
Q ss_pred ----------HHHhh-cccCCchHHHHHH-----HHHcCCC-CCChHHHHHHHHHHHHHHHHH
Q 013892 377 ----------YKVAS-VNLCSNISGQILA-----SLVMSPP-KVGDESYESYCAERDGILSSL 422 (434)
Q Consensus 377 ----------~~~~~-~~~~~~~~~q~~~-----~~~l~~~-~~~~~~~~~~~~~r~~l~~~L 422 (434)
.+++. ...|.+++.|.++ ..+++.. ++.++.++.|+++|+.+.+.|
T Consensus 361 ~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~~l~~~L 423 (527)
T PRK09275 361 KFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYKALYEGL 423 (527)
T ss_pred hhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHc
Confidence 34444 5678899998862 3445543 456788899999999998887
No 67
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=293.38 Aligned_cols=267 Identities=22% Similarity=0.359 Sum_probs=236.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
..||.+++++.+.++. +..+|+ .+..++.+++++|.++++++.+.++.|++++|...++..+++.|. ++||.|
T Consensus 38 ~~pp~i~~Al~~rvdh----GvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T-~~gd~V 110 (388)
T COG1168 38 PTPPEIIEALRERVDH----GVFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT-KPGDGV 110 (388)
T ss_pred CCCHHHHHHHHHHHhc----CCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC-cCCCee
Confidence 6799999999999887 367787 567889999999999999999999999999999999999999999 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecC-CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLD-EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
++..|.|+++...++..|.+++..|+. +++.|.+|+++|++++.+. +++++++||||||||.+++++++++|.+
T Consensus 111 vi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~-----~vkl~iLCnPHNP~Grvwt~eeL~~i~e 185 (388)
T COG1168 111 VIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDE-----RVKLFILCNPHNPTGRVWTKEELRKIAE 185 (388)
T ss_pred EecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcC-----CccEEEEeCCCCCCCccccHHHHHHHHH
Confidence 999999999999999999999999997 4557889999999999874 6899999999999999999999999999
Q ss_pred HHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 298 ~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
+|++||+.||+||+|+++++.+.+ +.++..+.+.. .+ +.|.+.|.||+| .++|+.++++++ .++++++++.
T Consensus 186 lc~kh~v~VISDEIHaDlv~~g~~-h~~~a~ls~~~----a~-~~it~~saSKtF-NlaGL~~a~~Ii--~n~~lr~~~~ 256 (388)
T COG1168 186 LCLRHGVRVISDEIHADLVLGGHK-HIPFASLSERF----AD-NSITLTSASKTF-NLAGLKCAYIII--SNRELRAKFL 256 (388)
T ss_pred HHHHcCCEEEeecccccccccCCC-ccchhhcChhh----hc-ceEEEeeccccc-cchhhhheeEEe--cCHHHHHHHH
Confidence 999999999999999999999863 66666554433 23 579999999999 799999999987 4777766654
Q ss_pred HH-hh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 378 KV-AS-VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 378 ~~-~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+. .. ....+|.++..+...+.+.. .|++++++.++.+|+.+.+.|++..
T Consensus 257 ~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~ 308 (388)
T COG1168 257 KRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHL 308 (388)
T ss_pred HHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 43 32 56689999999999999875 6799999999999999999999874
No 68
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.1e-37 Score=309.14 Aligned_cols=253 Identities=19% Similarity=0.274 Sum_probs=211.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
.+|+.+++++.+.+.. ...|++. |.++||+++|+|+ ++++++|++|+|+++++..+++++ .+ +.|
T Consensus 32 ~~p~~~~~a~~~~~~~-----~~~Y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l~~~~~~~--~~-~~v 96 (354)
T PRK06358 32 GVPESLKQAITENLDK-----LVEYPDP-DYLELRKRIASFE------QLDLENVILGNGATELIFNIVKVT--KP-KKV 96 (354)
T ss_pred CCCHHHHHHHHHHHHh-----hhcCCCc-cHHHHHHHHHHHh------CCChhhEEECCCHHHHHHHHHHHh--CC-CcE
Confidence 4577788888877643 5568764 6899999999998 478999999999999999999886 34 689
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|+.|...++..|++++.++++++++|.+| +++.+.+.. ++++++++|||||||.+++.+++++|+++
T Consensus 97 ~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~ 169 (354)
T PRK06358 97 LILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKE------EIDLVFLCNPNNPTGQLISKEEMKKILDK 169 (354)
T ss_pred EEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhcc------CCCEEEEeCCCCCCCCccCHHHHHHHHHH
Confidence 99999999999999999999999999877788999 666666644 68999999999999999999999999999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
|++++++||+||+|.++.+++. ..+.... +. ..+ ++|+++||||.| |++|+|+||+++ .++.+++.+.+
T Consensus 170 a~~~~~~ii~De~Y~~~~~~~~--~~~~~~~---~~-~~~--~vi~~~S~SK~~-gl~G~RiG~lv~--~~~~~~~~~~~ 238 (354)
T PRK06358 170 CEKRNIYLIIDEAFMDFLEENE--TISMINY---LE-NFK--NLIIIRAFTKFF-AIPGLRLGYGLT--SNKNLAEKLLQ 238 (354)
T ss_pred HHhcCCEEEEeCcccccCCCcc--chhHHHh---cc-CCC--CEEEEEechhhc-cCcchhheeeec--CCHHHHHHHHH
Confidence 9999999999999999887653 2332222 22 122 589999999999 899999999975 35788888887
Q ss_pred HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 379 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
... ..+.+.+.|.++..++++.+++++.++.++++|+.+.+.|++.
T Consensus 239 ~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 284 (354)
T PRK06358 239 MRE-PWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEF 284 (354)
T ss_pred hCC-CCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 765 3478999999999999876667788889999999999999764
No 69
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.9e-37 Score=307.96 Aligned_cols=285 Identities=23% Similarity=0.324 Sum_probs=227.9
Q ss_pred cccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHH
Q 013892 69 EYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERA 148 (434)
Q Consensus 69 ~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~ 148 (434)
++.+...++..+.+.++. + +++++++.|+|.. .+++.+.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~--------~-~~~i~l~~~~p~~-----------------------------~~~~~~~~~~ 43 (357)
T TIGR03539 2 PDFPWDSLAPYKAKAASH--------P-DGIVDLSVGTPVD-----------------------------PVPPLIRAAL 43 (357)
T ss_pred CcchHHHHHHHHHHhhhC--------C-CCeEEccCCCCCC-----------------------------CCCHHHHHHH
Confidence 344555666777666543 1 5789999999975 2355566665
Q ss_pred HHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCC-CCCCCEEEcCChHHHHHHHHHHH-hcCCCCEEEEcCCCCh
Q 013892 149 WQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP-ADPNDIFLTDGASPAVHMMMQLL-IRSENDGILCPIPQYP 226 (434)
Q Consensus 149 ~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~-~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~Vlv~~p~y~ 226 (434)
.+... ...|++..|.++||+++++++.+++|++ +++++|++|+|+++++..++..+ + ++||.|++++|+|+
T Consensus 44 ~~~~~------~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~-~~gd~Vl~~~p~y~ 116 (357)
T TIGR03539 44 AAAAD------APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGL-GPGDTVVIPELAYP 116 (357)
T ss_pred HHHHh------hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcC-CCCCEEEECCCCcH
Confidence 54432 4579999999999999999999998987 99999999999999999998887 5 79999999999999
Q ss_pred hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 013892 227 LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306 (434)
Q Consensus 227 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l 306 (434)
.|...++..|++++.++ +++.+.. . ++++|++++|+||||.+++.+++++|+++|+++|++|
T Consensus 117 ~~~~~~~~~g~~~~~v~---------~~~~l~~---~------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~i 178 (357)
T TIGR03539 117 TYEVGALLAGATPVAAD---------DPTELDP---V------GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVV 178 (357)
T ss_pred HHHHHHHhcCCEEeccC---------ChhhcCc---c------CccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEE
Confidence 99999999999988874 2232221 1 6899999999999999999999999999999999999
Q ss_pred EEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccC
Q 013892 307 LADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLC 385 (434)
Q Consensus 307 i~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~ 385 (434)
|+||+|.++.|++. ..+.. .........+ ++|+++||||.| |++|+|+||+++ ++++++.+.+.+. ...+
T Consensus 179 i~De~y~~~~~~~~--~~~~~--~~~~~~~~~~-~vi~~~S~SK~~-~~~G~R~G~~i~---~~~~~~~~~~~~~~~~~~ 249 (357)
T TIGR03539 179 ASDECYLELGWEGR--PVSIL--DPRVCGGDHT-GLLAVHSLSKRS-NLAGYRAGFVAG---DPALVAELLTVRKHAGLM 249 (357)
T ss_pred EEecchhhhccCCC--Cccce--ecccCCCccc-cEEEEecccccc-CCCceeEEEEec---CHHHHHHHHHHHhhcccC
Confidence 99999999887643 22111 1100000112 589999999999 899999999986 8999999987765 4568
Q ss_pred CchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 386 SNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 386 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++.+.|.++..++.+..+.+..+..|+++++.+.+.|++.
T Consensus 250 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ 289 (357)
T TIGR03539 250 VPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA 289 (357)
T ss_pred CCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8999999999999876667778889999999999988774
No 70
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=3.4e-37 Score=306.98 Aligned_cols=266 Identities=23% Similarity=0.323 Sum_probs=218.1
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|+|.. .+++.+.+++.+... ...|++..|.+++|+++
T Consensus 27 ~~~i~l~~~~p~~-----------------------------~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~~i 71 (364)
T PRK07865 27 DGIVDLSVGTPVD-----------------------------PVPPVIQEALAAAAD------APGYPTTAGTPELREAI 71 (364)
T ss_pred CCEEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHh------hCCCCCccCCHHHHHHH
Confidence 4689999999875 234555666554432 34799999999999999
Q ss_pred HHHHHhhcCCC-CCCCCEEEcCChHHHHHHHHHHH-hcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCH
Q 013892 177 AAGIEARDGFP-ADPNDIFLTDGASPAVHMMMQLL-IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLET 254 (434)
Q Consensus 177 a~~~~~~~g~~-~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (434)
++|+.+++|++ +++++|++|+|+++++..++..+ + ++||.|+++.|+|+.|...++..|++++.++. +
T Consensus 72 a~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~---------~ 141 (364)
T PRK07865 72 VGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGL-GPGDVVVIPELAYPTYEVGARLAGATVVRADS---------L 141 (364)
T ss_pred HHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcC-CCCCEEEECCCCcccHHHHHHhcCCEEEecCC---------h
Confidence 99999999987 99999999999999999988887 6 79999999999999999999999999988742 2
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhC
Q 013892 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~ 334 (434)
+++.. . ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..+... ....
T Consensus 142 ~~l~~---~------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~--~~~~ 208 (364)
T PRK07865 142 TELGP---Q------RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAE--PVSILD--PRVC 208 (364)
T ss_pred hhCCc---c------cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCC--CCcccc--cccc
Confidence 23322 2 689999999999999999999999999999999999999999999887653 222111 1110
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 413 (434)
.. ...++|+++||||.| |++|+|+||+++ ++++++.+.+.+. ...+++.+.|.++..++.+.++.++.++.|++
T Consensus 209 ~~-~~~~~i~~~S~SK~~-~~~GlRiG~i~~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 283 (364)
T PRK07865 209 GG-DHTGLLAVHSLSKQS-NLAGYRAGFVAG---DPALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYAR 283 (364)
T ss_pred CC-ccceEEEEeechhcc-CCCceeeEEEec---CHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 01 112589999999999 889999999976 8999999987665 55678999999999999876677788899999
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+++.+.+.|++.
T Consensus 284 ~~~~l~~~L~~~ 295 (364)
T PRK07865 284 RRAVLRPALEAA 295 (364)
T ss_pred HHHHHHHHHHHc
Confidence 999999999875
No 71
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=305.95 Aligned_cols=256 Identities=23% Similarity=0.393 Sum_probs=225.3
Q ss_pred cccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh
Q 013892 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 211 (434)
+.|+||.++|+.+++++.+.+.. .+.|++. ...++++++++++ |. +++++|++++|+++.|..++++++
T Consensus 28 ssNenP~gp~~~~~~~~~~~~~~-----~~rYPd~-~~~~l~~a~a~~~----~~-~~~~~V~~gnGsde~i~~l~~~~~ 96 (356)
T COG0079 28 SSNENPYGPPPKVIEAIRAALDK-----LNRYPDP-DYRELRAALAEYY----GV-VDPENVLVGNGSDELIELLVRAFV 96 (356)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHh-----hccCCCC-cHHHHHHHHHHHh----CC-CCcceEEEcCChHHHHHHHHHHhh
Confidence 34445889999999998888774 6789988 5899999999998 21 678999999999999999999999
Q ss_pred cCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHH
Q 013892 212 RSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (434)
Q Consensus 212 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~ 291 (434)
.+||+|+++.|+|..|...++..|++++.+++.+ |.+|++.+.+.+++ ++++|++||||||||..++.++
T Consensus 97 -~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~------~~~lv~i~nPNNPTG~~~~~~~ 166 (356)
T COG0079 97 -EPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRD------KTKLVFLCNPNNPTGTLLPREE 166 (356)
T ss_pred -cCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhc------CCCEEEEeCCCCCCCCCCCHHH
Confidence 7999999999999999999999999999999875 79999999999987 7999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~ 371 (434)
++++++.+.+ +.+||+||+|.+ |.++ +....+. .++ ++|+++||||.| |++|+|+||+++ +++
T Consensus 167 l~~l~~~~~~-~~~vVvDEAY~e--F~~~-------~~~~l~~-~~~--nlivlRTfSKa~-gLAGlRlGy~ia---~~~ 229 (356)
T COG0079 167 LRALLEALPE-GGLVVIDEAYIE--FSPE-------SSLELLK-YPP--NLIVLRTFSKAF-GLAGLRVGYAIA---NPE 229 (356)
T ss_pred HHHHHHhCCC-CcEEEEeCchhh--cCCc-------hhhhhcc-CCC--CEEEEEecHHhh-hcchhceeeccC---CHH
Confidence 9999999988 999999999999 4432 1111111 223 489999999999 999999999877 999
Q ss_pred HHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 372 VREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 372 ~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+++.+.+++..| +.+.+++.++..++.+.++.++..+...++|+++.+.|+++.
T Consensus 230 ~i~~l~~vr~p~-~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~ 283 (356)
T COG0079 230 LIAALNKVRPPF-NVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG 283 (356)
T ss_pred HHHHHHHhcCCC-CCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999998766 889999999999999988889999999999999999999864
No 72
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-37 Score=309.80 Aligned_cols=262 Identities=19% Similarity=0.301 Sum_probs=218.8
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.++|++++|++.+ .+|+.+++++.+.+.. ...|++ .|.++||+++
T Consensus 30 ~~~i~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~-----~~~Y~~-~~~~~lr~~i 74 (357)
T PRK14809 30 DDLVKLSSNENPH-----------------------------GPSPAAVEAIREAAER-----VHSYPK-ASHADLTAAL 74 (357)
T ss_pred cceeEecCCCCCC-----------------------------CCCHHHHHHHHHHHhh-----hhcCCC-CCHHHHHHHH
Confidence 4799999997776 4577788887776653 456865 6899999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
|+++ ++++++|++|+|+++++.+++++++ ++||.|++++|+|+.|...++..|+.++.++++.+++|.++.++
T Consensus 75 a~~~------~~~~~~I~it~G~~~al~~~~~~~~-~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~ 147 (357)
T PRK14809 75 ADRW------DVSPEQVWLANGGDGALDYLARAML-DPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADT 147 (357)
T ss_pred HHHh------CCCcceEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHH
Confidence 9997 4789999999999999999999998 79999999999999999888999999999999776678888888
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++.+. ++++|+++|||||||.+++.+++++|+++|++ +++||+||+|.++.+.+ +...... .
T Consensus 148 ~~~~~~-------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~-----~~~~~~~----~ 210 (357)
T PRK14809 148 VLDAYD-------GERIVYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP-----SAVALVE----E 210 (357)
T ss_pred HHHhhc-------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc-----hhHHHHh----h
Confidence 776542 57899999999999999999999999999875 78999999999977532 1111111 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
.+ ++|+++||||.| |++|+|+||+++ ++++++.+.+... ..+++.+.|.++..++.+++++++.++.++++|+
T Consensus 211 ~~--~vi~~~SfSK~~-~~~GlRiG~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~ 283 (357)
T PRK14809 211 RD--DVAVLRTFSKAY-GLAGLRLGYAVV---PEEWADAYARVNT-PFAASELACRAGLAALDDDEHVERTVETARWARE 283 (357)
T ss_pred CC--CEEEEecchhHh-cCcchhheeeec---CHHHHHHHHHhCC-CCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 12 589999999999 899999999987 8899999887654 4477889999998888876677788888999999
Q ss_pred HHHHHHHH
Q 013892 417 GILSSLAR 424 (434)
Q Consensus 417 ~l~~~L~~ 424 (434)
.+.+.|+.
T Consensus 284 ~l~~~L~~ 291 (357)
T PRK14809 284 YIREELDA 291 (357)
T ss_pred HHHHHhcC
Confidence 88888864
No 73
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-36 Score=305.29 Aligned_cols=273 Identities=22% Similarity=0.332 Sum_probs=226.6
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++++++.|+|+. ..|+.+.+++.+.+..... ....|++..|.+++|+++
T Consensus 33 ~~~~~l~~g~p~~-----------------------------~~~~~v~~a~~~~~~~~~~-~~~~y~~~~g~~~lr~~i 82 (394)
T PRK06836 33 DNVFDFSLGNPSV-----------------------------PPPAAVKEALRELAEEEDP-GLHGYMPNAGYPEVREAI 82 (394)
T ss_pred CCeEEecCcCCCC-----------------------------CCCHHHHHHHHHHHhcCCc-CcccCCCCCCCHHHHHHH
Confidence 5789999999875 2366677777776654322 367899999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
++++.+.++.++++++|++|+|+++++..+++.++ ++||.|++++|+|..|...++..|++++.++++++ +|++|+++
T Consensus 83 a~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~ 160 (394)
T PRK06836 83 AESLNRRFGTPLTADHIVMTCGAAGALNVALKAIL-NPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDA 160 (394)
T ss_pred HHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHH
Confidence 99999988988999999999999999999999998 79999999999999999999999999999999764 58999999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH------cCCEEEEccCCCCCccCCCCCccchHHHH
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK------EGLVLLADEVYQENVYVPEKKFHSFKKVS 330 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~------~~~~li~Deay~~~~~~~~~~~~s~~~~~ 330 (434)
+++++++ ++++|++++|+||||.+++.+++++|+++|++ ||++||+||+|.++.|++.. ..++..
T Consensus 161 l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~-- 231 (394)
T PRK06836 161 LEAAITP------KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAE-VPYIFK-- 231 (394)
T ss_pred HHhhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCC-CCChHH--
Confidence 9999976 79999999999999999999999999999999 89999999999999886532 233221
Q ss_pred hhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHH------HHHHhh--cccCCchHHHHHHHHHcCCCC
Q 013892 331 RSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ------IYKVAS--VNLCSNISGQILASLVMSPPK 402 (434)
Q Consensus 331 ~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~------l~~~~~--~~~~~~~~~q~~~~~~l~~~~ 402 (434)
. .+ ++|+++||||.| |+||+|+||+++ ++++.+. +..... ...+++.+.|.++..++++.
T Consensus 232 -~----~~--~~i~~~S~SK~~-~~pGlRiG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~- 299 (394)
T PRK06836 232 -Y----YD--NSIVVYSFSKSL-SLPGERIGYIAV---NPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT- 299 (394)
T ss_pred -c----cC--cEEEEecchhhc-cCcceeeEEEec---CHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-
Confidence 1 12 489999999999 899999999987 6665332 221222 12468888999999999764
Q ss_pred CChHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
..++.|+++|+.+.+.|++.
T Consensus 300 ---~~~~~~~~~r~~l~~~L~~~ 319 (394)
T PRK06836 300 ---VDVSIYKRNRDLLYDGLTEL 319 (394)
T ss_pred ---HHHHHHHHHHHHHHHHHHhC
Confidence 34678899999999988775
No 74
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-37 Score=310.55 Aligned_cols=260 Identities=18% Similarity=0.203 Sum_probs=215.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
.+|+.+++++.+.+..... ....|++ .|.++||+++|+|+.+++|+++++++|++|+|+++++.+++++++ ++||.|
T Consensus 39 ~~~~~~~~al~~~l~~~~~-~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~-~~gd~v 115 (368)
T PRK03317 39 PPSPALVADIAEAVAEAAA-GLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFG-GPGRTA 115 (368)
T ss_pred CCCHHHHHHHHHHHhhhhh-hhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhc-CCCCEE
Confidence 6788899998887764321 2567865 589999999999999999999999999999999999999999999 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|+.|...++..|.+++.++.+ ++|++|+++++++++.. ++++|+++|||||||.+++.+++++|+++
T Consensus 116 ~v~~P~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~ 188 (368)
T PRK03317 116 LGFVPSYSMHPIIARGTHTEWVEGPRA--ADFTLDVDAAVAAIAEH-----RPDVVFLTSPNNPTGTALPLDDVEAILDA 188 (368)
T ss_pred EEeCCChHHHHHHHHhcCCeeEEcccC--CCCCCCHHHHHHHHhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999888764 35899999999998753 68899999999999999998888888877
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
| ++++|+||+|.++.+.+. .+...... ..+ ++|+++||||.| |++|+|+||+++ ++++++.+.+
T Consensus 189 ~---~~~lI~DE~y~~~~~~~~---~~~~~~~~----~~~--~~i~~~SfSK~~-g~~GlRiG~~~~---~~~~~~~l~~ 252 (368)
T PRK03317 189 A---PGIVVVDEAYAEFRRSGT---PSALTLLP----EYP--RLVVSRTMSKAF-AFAGGRLGYLAA---APAVVDALRL 252 (368)
T ss_pred C---CceEEEeCCchhhcccCC---cCHHHHHH----hCC--CEEEEEechhhh-ccchhhhhhhhC---CHHHHHHHHh
Confidence 7 699999999999766542 12222221 123 489999999999 889999999987 9999999987
Q ss_pred HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 379 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
... ..+.+++.|.++..++++.++..+.++.+.++|+.+.+.|++.
T Consensus 253 ~~~-~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 298 (368)
T PRK03317 253 VRL-PYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL 298 (368)
T ss_pred cCC-CCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 664 4478899999998898765444455677788888888877764
No 75
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-37 Score=306.63 Aligned_cols=262 Identities=19% Similarity=0.229 Sum_probs=220.4
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+.+++++.|++.. ++|+.+++++.+.+.. ...|++. +..+||++|
T Consensus 32 ~~~~~l~~~~~~~-----------------------------~~~~~~~~a~~~~~~~-----~~~Y~~~-~~~~Lr~~i 76 (369)
T PRK08153 32 PFRARIGANESGF-----------------------------GPSPSVIAAMREAAAE-----IWKYGDP-ENHDLRHAL 76 (369)
T ss_pred cceeEecCCCCCC-----------------------------CCCHHHHHHHHHHHHH-----hhcCCCC-ccHHHHHHH
Confidence 3456999998876 5688898888776643 4568877 489999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
|+++ ++++++|++|+|+++++..++..++ ++||.|++++|+|+.|...++..|++++.++++.+ .+|+++
T Consensus 77 a~~~------~~~~~~I~it~G~~~~l~~~~~~~~-~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~ 146 (369)
T PRK08153 77 AAHH------GVAPENIMVGEGIDGLLGLIVRLYV-EPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDA 146 (369)
T ss_pred HHHh------CCCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHH
Confidence 9997 4688999999999999999999988 79999999999999999999999999999998654 678998
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++.+... ++++|+++|||||||.+++.+++++|+++|+ ++++||+||+|.++.+++. ..++. . .
T Consensus 147 l~~~~~~~-----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~--~~~~~---~----~ 211 (369)
T PRK08153 147 LLDAARRE-----NAPLVYLANPDNPMGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAGA--APPID---T----D 211 (369)
T ss_pred HHHHhccc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCccc--chhhh---h----c
Confidence 88776532 7899999999999999999999999999887 4999999999999876542 22221 1 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
.+ ++|+++||||.| |++|+|+||+++ ++++++.+.+.... .+.+.+.|.++..+++++++.++.++.++++|+
T Consensus 212 ~~--~~i~~~SfSK~~-g~~GlRiG~~v~---~~~~~~~l~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 284 (369)
T PRK08153 212 DP--NVIRMRTFSKAY-GLAGARVGYAIG---APGTIKAFDKVRNH-FGMNRIAQAAALAALKDQAYLAEVVGKIAAARD 284 (369)
T ss_pred CC--CEEEEecchHhc-cCcchheeeeec---CHHHHHHHHHhhcC-CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 23 489999999999 899999999987 89999999887654 478999999999999876667788889999999
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|++.
T Consensus 285 ~~~~~L~~~ 293 (369)
T PRK08153 285 RIAAIARAN 293 (369)
T ss_pred HHHHHHHHC
Confidence 998888764
No 76
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-37 Score=306.37 Aligned_cols=267 Identities=20% Similarity=0.257 Sum_probs=220.9
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|.|.. .+|+.+.+++.+.... ...|++..|. +||+++
T Consensus 36 ~~~i~l~~~~~~~-----------------------------~~~~~~~~al~~~~~~-----~~~Y~~~~g~-~lr~~i 80 (371)
T PRK05166 36 PRIAKLGSNENPL-----------------------------GPSPAVRRAFADIAEL-----LRLYPDPQGR-ALREAI 80 (371)
T ss_pred cceEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHHH-----hhcCCCCcHH-HHHHHH
Confidence 5789999997664 3466677776654432 5579999984 899999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
|+++ ++++++|++|+|+++++..++.+++ ++||.|+++.|+|+.+...++..|++++.+++++ +|++|+++
T Consensus 81 a~~~------~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~ 151 (371)
T PRK05166 81 AART------GVPADRIILGNGSEDLIAVICRAVL-RPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDA 151 (371)
T ss_pred HHHh------CcCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHH
Confidence 9987 3578899999999999999999998 7999999999999999999999999999999874 36899999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++++++ ++++++++|||||||.+++.+++++|+++|++ +++||+||+|.++.+++. +.+....... .
T Consensus 152 l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~--~~~~~~~~~~---~ 219 (371)
T PRK05166 152 LCAAVAR------APRMLMFSNPSNPVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDD--YPSALTLLKA---R 219 (371)
T ss_pred HHHhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcC--cccHHHHHhh---c
Confidence 9998876 68999999999999999999999999999874 889999999999886543 3444333221 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
.+ ++|+++||||.| |++|+|+||+++ .++++++.+.+... ..+++.+.|.++..++.+.++.++.++.++++|+
T Consensus 220 ~~--~vi~i~SfSK~~-~l~GlRiG~~i~--~~~~l~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 293 (371)
T PRK05166 220 GL--PWIVLRTFSKAY-GLAGLRVGYGLV--SDPELVGLLDRVRT-PFNVNGAAQAAALAALDDEEHLAKGVALALAERE 293 (371)
T ss_pred CC--CEEEEeechHhh-hcchhheeeeec--CCHHHHHHHHHhcc-CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 12 489999999999 899999999864 37888888877654 4468899998888888776677788889999999
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|+++
T Consensus 294 ~l~~~L~~~ 302 (371)
T PRK05166 294 RLKKELAEM 302 (371)
T ss_pred HHHHHHHHC
Confidence 999999875
No 77
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.6e-37 Score=305.50 Aligned_cols=259 Identities=17% Similarity=0.317 Sum_probs=213.7
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|.+.. .+|+.+++++.+. . ....|++. +..+||+++
T Consensus 52 ~~~i~l~~n~~p~-----------------------------~~~~~v~~a~~~~-~-----~~~~Yp~~-~~~~lr~~i 95 (380)
T PLN03026 52 EDIVKLDANENPY-----------------------------GPPPEVLEALGNM-K-----FPYVYPDP-ESRRLRAAL 95 (380)
T ss_pred cceEEccCCCCCC-----------------------------CCCHHHHHHHHhh-H-----hhccCCCC-CHHHHHHHH
Confidence 5789999987654 4567777765432 1 13457664 689999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
++++ ++++++|++|+|+++++..++..++ ++||+|++++|+|+.|...++..|++++.+++++ +|.+|++.
T Consensus 96 a~~~------~~~~~~I~~t~Ga~~~i~~~~~~~~-~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~--~~~~d~~~ 166 (380)
T PLN03026 96 AEDS------GLESENILVGCGADELIDLLMRCVL-DPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTP--DFSLDVPR 166 (380)
T ss_pred HHHh------CcChhhEEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCC--CCCcCHHH
Confidence 9997 3688999999999999999999988 7999999999999999999999999999999853 57999999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
|+++++.. ++++|+++|||||||.+++.+++++|++.+ ++||+||+|.++.+.+. . ..... .
T Consensus 167 l~~~~~~~-----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~~--~---~~~~~----~ 228 (380)
T PLN03026 167 IVEAVETH-----KPKLLFLTSPNNPDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQES--R---MKWVK----K 228 (380)
T ss_pred HHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCcc--h---HHHHH----h
Confidence 99988432 799999999999999999988888888753 89999999999765321 1 11111 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
++ ++|+++||||.| |++|+|+||+++ ++++++.+.+.... .+.+.++|.++..+|++.++.++.++.++++|+
T Consensus 229 ~~--~viv~~SfSK~~-glaGlRiGy~~~---~~~~i~~l~~~~~~-~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~ 301 (380)
T PLN03026 229 YD--NLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAKQP-YNVSVAAEVAACAALSNPKYLEDVKNALVEERE 301 (380)
T ss_pred CC--CEEEEecchHhh-cCccccceeeec---CHHHHHHHHHhcCC-CCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 23 489999999999 899999999987 89999999887654 478899999999999877777888999999999
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|+++
T Consensus 302 ~l~~~L~~~ 310 (380)
T PLN03026 302 RLFGLLKEV 310 (380)
T ss_pred HHHHHHHHC
Confidence 999999875
No 78
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.8e-37 Score=304.31 Aligned_cols=264 Identities=17% Similarity=0.225 Sum_probs=219.5
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++++++.|+|.. ++++.+.+++.+.+.. ..|.+..|.+++|+++
T Consensus 29 ~~~i~l~~n~~~~-----------------------------~~~~~v~~a~~~~~~~------~~~~p~~g~~~lr~~i 73 (359)
T PRK03158 29 EKIVKLASNENPY-----------------------------GPSPKVKEAIAAHLDE------LALYPDGYAPELRTKV 73 (359)
T ss_pred CceEEecCCCCCC-----------------------------CCCHHHHHHHHHHHHH------hhcCCCCcHHHHHHHH
Confidence 4788888887764 3577788887776653 2355667999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
|+++ .+++++|++|+|+++++..++++++ ++||.|++++|+|+.|...+...|++++.++++ ++++|++.
T Consensus 74 a~~~------~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~ 143 (359)
T PRK03158 74 AKHL------GVDEEQLLFGAGLDEVIQMISRALL-NPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEA 143 (359)
T ss_pred HHHh------CCCHHHEEECCCHHHHHHHHHHHHh-CCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHH
Confidence 9998 3678999999999999999999998 799999999999999999999999999999987 35889999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++.+++ ++++++++|||||||.+++.+++.++++.|+ +|++||+||+|.++.+++. ..+...... .
T Consensus 144 l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~--~~~~~~~~~----~ 210 (359)
T PRK03158 144 MLKAIDE------QTKIVWICNPNNPTGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAED--YPDTLPLLE----K 210 (359)
T ss_pred HHHhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcc--cccHHHHHH----h
Confidence 9888765 7899999999999999999999988888774 6999999999999887653 222222222 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
.+ ++|+++||||.| |++|+|+||+++ ++++++.+.+.... .+++.++|.++..++++.++.++.++.++++|+
T Consensus 211 ~~--~vi~~~S~SK~~-g~~GlRiG~~v~---~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 283 (359)
T PRK03158 211 YE--NLIVLRTFSKAY-GLAALRVGYGIA---SEELIEKLNIARPP-FNTTRIAQYAAIAALEDQAFLKECVEKNAEGLE 283 (359)
T ss_pred cC--CEEEEEechHhh-cCcchhhehhcC---CHHHHHHHHHhcCC-CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 22 489999999999 899999999987 89999999877654 478999999999999876666777788888888
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|+++
T Consensus 284 ~~~~~l~~~ 292 (359)
T PRK03158 284 QYYAFCKEY 292 (359)
T ss_pred HHHHHHHHC
Confidence 888888765
No 79
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.7e-36 Score=301.04 Aligned_cols=264 Identities=17% Similarity=0.262 Sum_probs=215.8
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
++++++++|.+.. ++|+.+++++.+.+.. ...|++. +..++|+++
T Consensus 20 ~~~i~l~~~~~~~-----------------------------~~p~~~~~a~~~~~~~-----~~~y~~~-~~~~lr~~i 64 (356)
T PRK08056 20 DQLLDFSANINPL-----------------------------GMPVSLKRAIIDNLDC-----AERYPDV-EYRHLHQAL 64 (356)
T ss_pred hhEEEeccccCCC-----------------------------CCCHHHHHHHHHHHHh-----cccCcCc-cHHHHHHHH
Confidence 5789999887665 5688899988877654 3358764 699999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
|+++ .+++++|++|+|+++++..+++.+ .+|+ |+++.|+|..|...++..|++++.++++++++|.+| ++
T Consensus 65 a~~~------~~~~~~i~it~Ga~~~l~~~~~~l--~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~ 134 (356)
T PRK08056 65 ARHH------QVPASWILAGNGETESIFAVVSGL--KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DA 134 (356)
T ss_pred HHHh------CcChhhEEECCCHHHHHHHHHHHh--CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HH
Confidence 9997 468899999999999999999886 4675 788899999999999999999999999877778777 44
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++.+.+ ++++|+++|||||||.+++.+++++|+++|++++++||+||+|.++.+++.. +.+ . +. .
T Consensus 135 ~~~~~~~------~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~---~---~~-~ 200 (356)
T PRK08056 135 ILEALTP------DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETG-FIP---Q---LA-D 200 (356)
T ss_pred HHHhccC------CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchH-HHH---H---hc-c
Confidence 5555543 7899999999999999999999999999999999999999999998765421 111 1 11 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
.+ ++|+++||||.| |++|+|+||+++ .++++++.+.+... ..+++.++|.++..++++..+..+.++.++++|+
T Consensus 201 ~~--~~i~~~S~SK~~-~~~G~RiG~~v~--~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~ 274 (356)
T PRK08056 201 NP--HLWVLRSLTKFY-AIPGLRLGYLVN--SDDAAVARMRRQQM-PWSINAFAALAGEVILQDRAYQQATWQWLAEEGA 274 (356)
T ss_pred CC--CEEEEEechhhc-cCcchhheeeec--CCHHHHHHHHHhCC-CCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 22 479999999999 899999999975 35678888876543 3467889999999999876666777889999999
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|+++
T Consensus 275 ~l~~~L~~~ 283 (356)
T PRK08056 275 RFYQALCAL 283 (356)
T ss_pred HHHHHHhcC
Confidence 999999764
No 80
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=4e-36 Score=301.76 Aligned_cols=290 Identities=20% Similarity=0.245 Sum_probs=215.3
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
++.++++||.....+ .|+ +++.+.+.+.+.......+|++..|.++||+++
T Consensus 3 ~~~~~~~~~~~~~~~-~~~----------------------------~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~i 53 (388)
T PRK08637 3 ATKYNATIGMATEKG-GPM----------------------------YLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLW 53 (388)
T ss_pred ccceecceeeEecCC-Ccc----------------------------hHHHHHHHHHhhccccccCCCCCCCCHHHHHHH
Confidence 568899999886533 222 344444444432112478999999999999999
Q ss_pred HHHHHhhcCCCCC---CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HcCCeEEEEecCCCCCCCC
Q 013892 177 AAGIEARDGFPAD---PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHGGTLVPYYLDEATGWGL 252 (434)
Q Consensus 177 a~~~~~~~g~~~~---~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 252 (434)
++++.++.+ ... .++|++|+|+++++.+++.+++ ++||.|++++|+|+.|...+. ..|++++.+++..+ ++++
T Consensus 54 a~~~~~~~~-~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~-~~~~ 130 (388)
T PRK08637 54 QEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVADLFV-DQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGF 130 (388)
T ss_pred HHHHhccCc-cccccccceeeEccchHHHHHHHHHHhc-CCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCC-CCcC
Confidence 999987653 333 3689999999999999999998 799999999999999998765 68999999998432 3478
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH-----cCCEEEEccCCCCCccCCCCCccchH
Q 013892 253 ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK-----EGLVLLADEVYQENVYVPEKKFHSFK 327 (434)
Q Consensus 253 d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~-----~~~~li~Deay~~~~~~~~~~~~s~~ 327 (434)
|+++++++++.+..+ ...+++++|||||||.+++.+++++|+++|++ ++++||+||+|.++.|++.. ..++.
T Consensus 131 d~~~l~~~~~~~~~~--~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~-~~~~~ 207 (388)
T PRK08637 131 DTDALKEALQAAYNK--GKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSY-KESLF 207 (388)
T ss_pred CHHHHHHHHHhhccC--CCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCcc-chhhH
Confidence 999999988721111 34567777999999999999999999999875 89999999999999887642 33332
Q ss_pred HHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEec---CCHHHHHHHHHHh----h-cccCCchHHHHHHHHHcC
Q 013892 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG---FSAEVREQIYKVA----S-VNLCSNISGQILASLVMS 399 (434)
Q Consensus 328 ~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~---~~~~~~~~l~~~~----~-~~~~~~~~~q~~~~~~l~ 399 (434)
.... +.++++.+++++||||.| ++||+|+||+++.. .++++++.+.+.. . ...++|.+.|.++..+++
T Consensus 208 ~~~~---~~~~~vi~i~~~s~SK~~-~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~ 283 (388)
T PRK08637 208 AALA---NLHSNILAVKLDGATKEE-FVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALN 283 (388)
T ss_pred HHhh---cccccceEEEeccccccC-CCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhC
Confidence 2111 122343345677999999 79999999998621 2578888876421 2 345789999999999998
Q ss_pred CCCC---ChHHHHHHHHHHHHHHHHHHHH
Q 013892 400 PPKV---GDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 400 ~~~~---~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++.+ ..+.+..++++++.+.+.|++.
T Consensus 284 ~~~~~~~~~~~~~~~~~r~~~~~~~l~~~ 312 (388)
T PRK08637 284 SPEFDKEKQEKFQILKERYEKTKEVLYDG 312 (388)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7533 2344556777777777777654
No 81
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1.6e-36 Score=302.41 Aligned_cols=247 Identities=18% Similarity=0.223 Sum_probs=206.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
++|+.+++++.+.+.. ...|++.. ..+||++|++++ ++++++|++|+|+++++.+++..++ ++||+|
T Consensus 56 ~~~~~~~~a~~~~~~~-----~~~Y~~~~-~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai~~~~~~l~-~~gd~V 122 (370)
T PRK09105 56 GPSPAARDAAARSAAL-----SGRYDLEL-EDDLRTLFAAQE------GLPADHVMAYAGSSEPLNYAVLAFT-SPTAGL 122 (370)
T ss_pred CCCHHHHHHHHHHHHH-----hcCCCCch-HHHHHHHHHHHh------CcChhhEEEcCChHHHHHHHHHHHc-CCCCEE
Confidence 6788899988877654 23587765 899999999986 3689999999999999999999998 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
++++|+|+.|...++..|++++.+++++ +|.+|++.+++. .+ ++++++++|||||||.+++.+++++|++.
T Consensus 123 li~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~------~~~~v~l~nP~NPTG~~~~~~~l~~l~~~ 193 (370)
T PRK09105 123 VTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DP------NAGLIYICNPNNPTGTVTPRADIEWLLAN 193 (370)
T ss_pred EEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CC------CCCEEEEeCCCCCCCcCcCHHHHHHHHHh
Confidence 9999999999999999999999999865 478999998765 22 68899999999999999999999999987
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
+ +++++||+||+|.++. .. .+...... ..+ ++|+++||||.| |++|+|+||+++ ++++++.+..
T Consensus 194 ~-~~~~~lIvDEaY~~f~--~~---~s~~~~~~----~~~--~vi~~~SfSK~~-g~~GlRiG~~v~---~~~~i~~l~~ 257 (370)
T PRK09105 194 K-PAGSVLLVDEAYIHFS--DA---PSVVDLVA----QRK--DLIVLRTFSKLY-GMAGMRLGLAAA---RPDLLAKLAR 257 (370)
T ss_pred C-CCCcEEEEECchHHhc--cC---cchHHHHh----hCC--CEEEEecccHhh-cCCccceeeeec---CHHHHHHHHh
Confidence 5 4599999999998743 22 13323221 123 489999999999 899999999987 8999999877
Q ss_pred HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 379 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
. ....++.+.|.++..++.++++.++.++.++++|+.+.+.|++.
T Consensus 258 ~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 302 (370)
T PRK09105 258 F--GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK 302 (370)
T ss_pred c--CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 6 23458888898888888877777788899999999999999875
No 82
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.3e-36 Score=310.08 Aligned_cols=253 Identities=21% Similarity=0.289 Sum_probs=193.1
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHH-HHHHhhcCCC-CCCC--CEEEcCChHHHHHHHHHH-----Hh
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA-AGIEARDGFP-ADPN--DIFLTDGASPAVHMMMQL-----LI 211 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia-~~~~~~~g~~-~~~~--~i~~t~G~~~al~~~l~~-----l~ 211 (434)
|++.+.++.+.+.. . .|+++.|...++++++ +|+.++++.. ..++ +|++|+|+++++..++.+ ++
T Consensus 108 ~~~~~~~~~~~~~~-----~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll 181 (521)
T TIGR03801 108 PDAFLYEMCDGIIG-----D-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELL 181 (521)
T ss_pred CCHHHHHHHHHhhc-----C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcC
Confidence 34455665555421 2 4987778888887777 5666654433 3333 899999999999999887 56
Q ss_pred cCCCCEEEEcCCCChhHHHHHHHc--CCeEEEEecCCCCC-----CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 212 RSENDGILCPIPQYPLYSASIALH--GGTLVPYYLDEATG-----WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 212 ~~~gd~Vlv~~p~y~~~~~~~~~~--g~~~~~~~~~~~~~-----~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
+|||+|+++.|+|+.|...++.. |++++.++++++++ |.+|.+++++++++ ++|+|+++|||||||
T Consensus 182 -~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~------~~kai~l~nP~NPTG 254 (521)
T TIGR03801 182 -KKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDP------SIKALFVVNPSNPPS 254 (521)
T ss_pred -CCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCC------CCcEEEEeCCCCCCC
Confidence 79999999999999999998776 78888888865444 99999999987765 799999999999999
Q ss_pred cCCCHHHHHHHHHHHHHc--CCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEE
Q 013892 285 QVLAEENQRAIVDFCKKE--GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~--~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~ 362 (434)
.+++.+++++|+++|++| +++||+||+|.++.+ . +.++.... ++ ++|+++||||.| |++|||+||
T Consensus 255 ~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~--~~sl~~~~-------~~-~vI~v~SfSK~f-g~~G~RlG~ 321 (521)
T TIGR03801 255 VAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--D--FRSLFAEL-------PY-NTIGVYSFSKYF-GATGWRLGT 321 (521)
T ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--c--ccchhhhC-------CC-CEEEEEcchhhc-cCchhhhhh
Confidence 999999999999999986 999999999999764 2 44543321 23 589999999999 899999999
Q ss_pred EEEecCCHH-H------------HHHH------------------------HHHhh-cccCCchHHHH-----HHHHHcC
Q 013892 363 MEVTGFSAE-V------------REQI------------------------YKVAS-VNLCSNISGQI-----LASLVMS 399 (434)
Q Consensus 363 ~~~~~~~~~-~------------~~~l------------------------~~~~~-~~~~~~~~~q~-----~~~~~l~ 399 (434)
+++ +++ + ++.+ .+++. .+.+.+++.|. ++..+++
T Consensus 322 i~~---~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~ 398 (521)
T TIGR03801 322 IAL---HKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMD 398 (521)
T ss_pred hhc---CchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhc
Confidence 986 433 2 2222 22333 45677777776 3445555
Q ss_pred CC-CCChHHHHHHHHHHHHHHHHH
Q 013892 400 PP-KVGDESYESYCAERDGILSSL 422 (434)
Q Consensus 400 ~~-~~~~~~~~~~~~~r~~l~~~L 422 (434)
.+ .+.++.++.++++|+.+.+.|
T Consensus 399 ~~~~y~~~~~~~~~~R~~~l~~~L 422 (521)
T TIGR03801 399 KENAYKAETKDICRRREKLLFRGL 422 (521)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhc
Confidence 43 456778889999999998887
No 83
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=8.1e-36 Score=296.65 Aligned_cols=249 Identities=18% Similarity=0.181 Sum_probs=198.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
.+|+.+++++.+.+.. ...|++.. ..+||++||+++ ++++++|++|+|+++++.++++++. +||.|
T Consensus 35 ~~~~~~~~a~~~~~~~-----~~~Y~~~~-~~~Lr~aia~~~------~v~~~~I~it~G~~~~i~~~~~~l~--~g~~v 100 (360)
T PRK07392 35 GPPESVIAAIQSALSA-----LRHYPDPD-YRELRLALAQHH------QLPPEWILPGNGAAELLTWAGRELA--QLRAV 100 (360)
T ss_pred CCCHHHHHHHHHHHHH-----hhcCCCcC-HHHHHHHHHHHh------CcChhhEEECCCHHHHHHHHHHHhC--CCCeE
Confidence 5678888888776654 45688764 689999999998 4789999999999999999999874 68899
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCC---CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGW---GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~---~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i 295 (434)
++++|+|+.|...++..|++++.++++.+++| ..+++.+++.. . ++++++++|||||||.+++++++
T Consensus 101 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~l~nP~NPTG~~~~~~~l--- 170 (360)
T PRK07392 101 YLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-T------PNDGLLLNNPHNPTGKLWSREAI--- 170 (360)
T ss_pred EEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-c------CCCEEEEeCCCCCCCCCcCHHHH---
Confidence 99999999999999999999999999876554 34555554432 1 57899999999999999996655
Q ss_pred HHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHH
Q 013892 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (434)
Q Consensus 296 ~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 375 (434)
.++++++++ +|+||+|.++.+++. ..++..... .++ ++|+++||||.| |++|+|+||+++ ++++++.
T Consensus 171 ~~l~~~~~~-~IiDE~y~~~~~~~~--~~s~~~~~~----~~~--~vi~i~S~SK~~-~l~GlRiG~~v~---~~~~~~~ 237 (360)
T PRK07392 171 LPLLEQFAL-VVVDEAFMDFLPPDA--EQSLIPCLA----EYP--NLIILRSLTKFY-SLPGLRLGYAIA---HPDRLQR 237 (360)
T ss_pred HHHHHHCCE-EEEECchhhhccCcc--ccchHHHhh----cCC--CEEEEEechhhh-cCCchheeeeeC---CHHHHHH
Confidence 455667775 666999999887653 334333222 223 489999999999 899999999987 8899988
Q ss_pred HHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 376 IYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 376 l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.+... ..+++.+.|.++..++++..+.+..++.++++|+.+.+.|+++
T Consensus 238 ~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 286 (360)
T PRK07392 238 WQQWRD-PWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASL 286 (360)
T ss_pred HHhhCC-CCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 876553 3578999999999999876555666778888999999988754
No 84
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6e-36 Score=296.77 Aligned_cols=258 Identities=19% Similarity=0.250 Sum_probs=212.3
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|+|.+ ++|+.+.+++.+.+.+ ....|++. |.++||+++
T Consensus 24 ~~~i~l~~~~~~~-----------------------------~~~~~~~~a~~~~~~~----~~~~y~~~-~~~~lr~ai 69 (353)
T PRK05387 24 AKLIKLNTNENPY-----------------------------PPSPKVLEAIRAALGD----DLRLYPDP-NADALRQAI 69 (353)
T ss_pred cceeeccCCCCCC-----------------------------CCCHHHHHHHHHHhhh----hhhcCCCC-cHHHHHHHH
Confidence 3678888888765 4467788888776664 25578765 679999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
|+++ .+++++|++|+|+++++.+++++++ ++||+|++++|+|+.|...++..|++++.+++++ +|++|+++
T Consensus 70 a~~~------~~~~~~I~it~G~~~al~~~~~~l~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~ 140 (353)
T PRK05387 70 AAYY------GLDPEQVFVGNGSDEVLAHAFLAFF-NHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDD--DFSIDVED 140 (353)
T ss_pred HHHh------CCCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHH
Confidence 9998 3688999999999999999999998 7999999999999999999999999999999864 47899998
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++ ..++++++|||||||.+++.+++++|+++++ ++++|+||+|.+ |++. +.. .... .
T Consensus 141 l~~----------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~--~~~livDe~y~~--~~~~-~~~---~~~~----~ 198 (353)
T PRK05387 141 YLR----------PNGGIIFPNPNAPTGIALPLAEIERILAANP--DSVVVIDEAYVD--FGGE-SAI---PLID----R 198 (353)
T ss_pred HHh----------cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC--CcEEEEeCcccc--cCCc-chH---HHHh----h
Confidence 863 4578999999999999999999999988653 899999999987 4432 111 1111 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhc--ccCCchHHHHHHHHHcCCCCCChHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASV--NLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 414 (434)
++ ++|+++||||.| |++|+|+||+++ ++++++.+.+.... ..+++.+.|.++..++.+.++.++.++++.++
T Consensus 199 ~~--~~i~~~S~SK~~-~~~GlR~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 272 (353)
T PRK05387 199 YP--NLLVVQTFSKSR-SLAGLRVGFAIG---HPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIAT 272 (353)
T ss_pred CC--CEEEEEehhHhh-cchhhhceeeec---CHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 23 479999999999 899999999987 89999999887652 34678999999988998766677888899999
Q ss_pred HHHHHHHHHHH
Q 013892 415 RDGILSSLARR 425 (434)
Q Consensus 415 r~~l~~~L~~~ 425 (434)
|+.+.+.|++.
T Consensus 273 ~~~l~~~L~~~ 283 (353)
T PRK05387 273 RERLVEELEAL 283 (353)
T ss_pred HHHHHHHHHHC
Confidence 99999998875
No 85
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.7e-35 Score=300.08 Aligned_cols=279 Identities=21% Similarity=0.275 Sum_probs=211.4
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHH-HHHHHHcCC-CCCCCCCCCCcchHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIER-AWQILDQIP-GRATGAYSHSQGIKGLRD 174 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~-~~~~l~~~~-~~~~~~Y~~~~G~~~lr~ 174 (434)
+++|++++|+|... .+|...+.. +.+.+.... ......|++..|.++||+
T Consensus 30 ~~~i~l~~g~p~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~ 81 (416)
T PRK09440 30 PGAIMLGGGNPAHI----------------------------PEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIE 81 (416)
T ss_pred CCceeccCCCCCcc----------------------------CCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHH
Confidence 46899999998741 123334433 344443311 012467999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc----CCCCEEEE-cCCCChhHHHHHHHcCC----eEEEEecC
Q 013892 175 TIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR----SENDGILC-PIPQYPLYSASIALHGG----TLVPYYLD 245 (434)
Q Consensus 175 ~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~----~~gd~Vlv-~~p~y~~~~~~~~~~g~----~~~~~~~~ 245 (434)
+||+|+.+++|+++++++|++|+|+++++.+++++++. ++||.|++ +.|+|+.|...+...|. .+..++++
T Consensus 82 aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~ 161 (416)
T PRK09440 82 ALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLP 161 (416)
T ss_pred HHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeeccccccccc
Confidence 99999999999999999999999999999999999983 25899999 69999999886654432 22223333
Q ss_pred CCC-CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 246 EAT-GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 246 ~~~-~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
.++ +|++|++.|+ +.+ ++++++++|||||||.+++.+++++|+++|+++|++||+||+|.++... .
T Consensus 162 ~~~~~~~~d~~~l~--~~~------~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-----~ 228 (416)
T PRK09440 162 EGQFKYHVDFEHLH--IDE------DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-----I 228 (416)
T ss_pred ccccccCCCHHHcc--cCC------CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-----c
Confidence 321 4789999987 222 6899999999999999999999999999999999999999999863211 0
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCC
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKV 403 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~ 403 (434)
.+..... ... .++|+++|||| + ++||+|+||+++ ++++++.+.+... ...+++.+.|.++..++++.++
T Consensus 229 ~~~~~~~----~~~-~~vI~~~SfSK-~-~~pGlRiG~~i~---~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 298 (416)
T PRK09440 229 IFSEATP----LWN-PNIILCMSLSK-L-GLPGVRCGIVIA---DEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDL 298 (416)
T ss_pred chhhcCc----ccc-CCeEEEecccc-c-CCCcceEEEEeC---CHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchH
Confidence 1111111 111 25899999999 5 789999999987 8999999988776 4567899999999999987643
Q ss_pred C---hH-HHHHHHHHHHHHHHHHHHHH
Q 013892 404 G---DE-SYESYCAERDGILSSLARRA 426 (434)
Q Consensus 404 ~---~~-~~~~~~~~r~~l~~~L~~~~ 426 (434)
. .+ .++.|+++++.+.+.|++..
T Consensus 299 ~~~~~~~~~~~~~~r~~~~~~~L~~~l 325 (416)
T PRK09440 299 LRLSETVIRPFYRQKVQLAIALLRRYL 325 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 22 46778888888888887763
No 86
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.9e-36 Score=295.97 Aligned_cols=249 Identities=21% Similarity=0.303 Sum_probs=207.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
++|+.+++++.+.+... ....|++ .|.++||+++|+++ |.. ..++|++|+|+++++..++.+++ ++||+|
T Consensus 39 ~~~~~~~~~~~~~~~~~---~~~~Y~~-~~~~~lr~~ia~~~----~~~-~~~~I~~t~G~~~~i~~~~~~~~-~~gd~v 108 (356)
T PRK04870 39 RLPAELRAELGERLAEV---ALNRYPD-PRAAALKAALRAAM----GVP-AGADVLLGNGSDELIQLLALACA-KPGATV 108 (356)
T ss_pred CCCHHHHHHHHHHhhcc---ccccCCC-CCHHHHHHHHHHHh----CcC-CCCcEEEcCCHHHHHHHHHHHhc-CCCCEE
Confidence 56888999988877642 2567887 67899999999998 322 22589999999999999999998 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|..|...++..|++++.+++++ +|++|++.|+++++.. ++++|+++|||||||.+++.+++++|+++
T Consensus 109 lv~~P~y~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~ 181 (356)
T PRK04870 109 LAPEPGFVMYRMSAKLAGLEFVGVPLTA--DFTLDLPAMLAAIAEH-----RPALVFLAYPNNPTGNLFDDADVERIIEA 181 (356)
T ss_pred EECCCCHHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcC-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999874 4799999999998653 78999999999999999999999999999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
| ++++|+||+|.++.+.. +. .. +. .++ ++|+++|||| + |++|+|+||+++ ++++++.+.+
T Consensus 182 ~---~~~ii~De~y~~~~~~~---~~---~~---~~-~~~--~vi~~~S~SK-~-~~~GlRiG~~i~---~~~~i~~~~~ 241 (356)
T PRK04870 182 A---PGLVVVDEAYQPFAGDS---WL---PR---LA-RFP--NLLVMRTVSK-L-GLAGLRLGYLAG---HPAWIAELDK 241 (356)
T ss_pred C---CCEEEEECCchhhcCcc---hH---HH---Hh-hCC--CEEEEecchh-h-hhHHHhhhhhhC---CHHHHHHHHH
Confidence 8 78999999999864321 11 11 11 122 4899999999 8 899999999987 8999999887
Q ss_pred HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 379 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.... ++.+.++|.++..++++.+..++.++.++++|+.+.+.|++.
T Consensus 242 ~~~~-~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 287 (356)
T PRK04870 242 VRPP-YNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAAL 287 (356)
T ss_pred ccCC-CcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6643 468889999988888765556777888899999998888764
No 87
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.8e-35 Score=319.08 Aligned_cols=269 Identities=12% Similarity=0.173 Sum_probs=210.7
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHhcCCCCE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~~gd~ 217 (434)
++|+.+++++.+.+... .| ..|.+++++++++++.+++|++.++ ++|++|+|+++++..++++++ ++||.
T Consensus 710 ppPp~V~eAi~eal~~~------~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl-~pGD~ 780 (1082)
T PLN02672 710 PVPSAVKASIFESFVRQ------NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCV-QEGGT 780 (1082)
T ss_pred CCCHHHHHHHHHHHhhc------CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHc-CCCCE
Confidence 67888999888877542 12 3457789999999999999988865 589999999999999999998 79999
Q ss_pred EEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCC-CCCccCCCHHHHHHHH
Q 013892 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG-NPTGQVLAEENQRAIV 296 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~-NPtG~~~~~~~l~~i~ 296 (434)
|+++.|+|+.|...++..|++++.++++++++|.+|++.|++++++. +.++|+++||+ ||||.+++.+++++|+
T Consensus 781 VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~-----~~~~I~L~nPnhNPTG~v~S~eeLe~Ll 855 (1082)
T PLN02672 781 LCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV-----KKPWVYISGPTINPTGLLYSNSEIEEIL 855 (1082)
T ss_pred EEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC-----CCCEEEEECcCCCCcCccCCHHHHHHHH
Confidence 99999999999999999999999999987778999999999998642 34589999996 9999999999999999
Q ss_pred HHHHHcCCEEEEccCCCCCccCCCC-CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHH
Q 013892 297 DFCKKEGLVLLADEVYQENVYVPEK-KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (434)
Q Consensus 297 ~~~~~~~~~li~Deay~~~~~~~~~-~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 375 (434)
++|++||++||+||+|.++.|++.. ...++......+....++.++|+++||||.| +++|+|+||+++ .++++++.
T Consensus 856 ela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf-~lpGLRIGylIa--p~~eLi~~ 932 (1082)
T PLN02672 856 SVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTEL-LSGGHEFGFLAL--NDSVLIDA 932 (1082)
T ss_pred HHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhh-ccHHHHheeEEe--CCHHHHHH
Confidence 9999999999999999999997542 1122322222222111223689999999999 899999999976 34568999
Q ss_pred HHHHhhcccCCchHHHHHHHHH---cC--CC---CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 376 IYKVASVNLCSNISGQILASLV---MS--PP---KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 376 l~~~~~~~~~~~~~~q~~~~~~---l~--~~---~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.+..... ++....|.++..+ +. +. +++.+.++.++++|+.+.+.|++.
T Consensus 933 l~~~~~~s-~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 933 FHSAPGLS-RPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC 989 (1082)
T ss_pred HHHhhhhc-CCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 87764322 3333344443333 32 22 234566778999999999999875
No 88
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=279.95 Aligned_cols=259 Identities=23% Similarity=0.399 Sum_probs=229.4
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc-C
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH-G 236 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~-g 236 (434)
...|.+..|.+.+|+++|+|+.+..| +..+|+++++++|++.+...++-.|+ +|||.-++|.|.|+++...+++. |
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLa-dpgdafLvPtPyY~gfdrdl~~rTg 192 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLA-DPGDAFLVPTPYYPGFDRDLRWRTG 192 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhc-CCCceeeecCCCCCcccccceeccC
Confidence 56788999999999999999988665 45789999999999999999998888 89999999999999998888875 8
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
.++++|.+..+++|.+++++||++++++++.|.+++.|+++||+||.|.+++++++..+++++.++|+.+|+||+|..-+
T Consensus 193 veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sV 272 (471)
T KOG0256|consen 193 VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSV 272 (471)
T ss_pred ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHH
Q 013892 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASL 396 (434)
Q Consensus 317 ~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~ 396 (434)
|+.. .|.|+.++...... .++ ++-++.|+||.| |+||+|+|.+.. .+++++.+..++.+.+ ..+...|..+..
T Consensus 273 F~~~-~F~Sv~ev~~~~~~-~~~-rvHivyslSKD~-GlpGfRvGviYS--~ne~VvsaA~kmssf~-~vSs~tQ~~la~ 345 (471)
T KOG0256|consen 273 FDKS-EFRSVLEVRKDPHL-DPD-RVHIVYSLSKDF-GLPGFRVGVIYS--NNEDVVSAATKMSSFG-LVSSQTQYLLAS 345 (471)
T ss_pred cCcc-CceEHHHHhhcccc-CCC-cEEEEEEecccc-CCCceEEEEEEe--cChHHHHHHHHHhhcc-CCcHHHHHHHHH
Confidence 9987 49999888776542 355 788999999999 999999999954 5888988888877544 678889999999
Q ss_pred HcCCCCC----ChHHHHHHHHHHHHHHHHHHHHH
Q 013892 397 VMSPPKV----GDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 397 ~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+|.|.++ +.+..++++.+.+++.+.|++..
T Consensus 346 LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lg 379 (471)
T KOG0256|consen 346 LLSDEEFTREYLRENNKRLRIRHRYIVEGLKALG 379 (471)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcC
Confidence 9999643 45666677777778888887764
No 89
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-35 Score=276.58 Aligned_cols=313 Identities=19% Similarity=0.217 Sum_probs=248.4
Q ss_pred cccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHH
Q 013892 67 KCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIE 146 (434)
Q Consensus 67 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~ 146 (434)
++..++..+|....+.++++ |-.++|||+||-......+++ --.+++
T Consensus 4 ~i~~~p~DpIlgL~e~f~~D--------~R~~KVNLgIGvY~de~Gk~p-------------------------vl~aV~ 50 (396)
T COG1448 4 KIEAAPADPILGLKEAFKAD--------PRPNKVNLGIGVYKDEDGKTP-------------------------VLRAVK 50 (396)
T ss_pred ccccCCCCchhHHHHHHhcC--------CCcCeeeeeeeeeeCCCCCcc-------------------------hhHHHH
Confidence 45556677888888888877 557999999998887444443 123666
Q ss_pred HHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCC---CCCCCE--EEcCChHHHHHHHHHHHhc-CCCCEEEE
Q 013892 147 RAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP---ADPNDI--FLTDGASPAVHMMMQLLIR-SENDGILC 220 (434)
Q Consensus 147 ~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~---~~~~~i--~~t~G~~~al~~~l~~l~~-~~gd~Vlv 220 (434)
++.+.+.+.. ....|.+..|.+++++++++++ +|.+ +..++| +-|.|+|.|+.+....+.+ .+..+|++
T Consensus 51 ~Ae~~l~~~~--~~k~Yl~i~G~~~f~~~~~~ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwi 125 (396)
T COG1448 51 KAEKRLLEQE--KTKNYLPIEGLPEFLEAVQKLL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWI 125 (396)
T ss_pred HHHHHhhccc--cccccCCcCCcHHHHHHHHHHh---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEe
Confidence 6666665544 3788999999999999999999 5533 444544 6789999999999888753 36677999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC--CCCCccCCCHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP--GNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p--~NPtG~~~~~~~l~~i~~~ 298 (434)
++|+|++|..+++..|.++..||+.+..+-++|++.+...|+.+ ..+-|+|.|+ |||||..++.++|++|+++
T Consensus 126 s~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a-----~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~ 200 (396)
T COG1448 126 SDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA-----PEGSVVLLHGCCHNPTGIDPTEEQWQELADL 200 (396)
T ss_pred CCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhC-----CCCCEEEEecCCCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999987777789999999999886 3444555544 9999999999999999999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH-
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY- 377 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~- 377 (434)
.+++|++.++|-+|++|.-+-+ .....++-+....+ .++++.||||+| |++|.|+|++.+++.+.+.++.+.
T Consensus 201 ~~~r~lip~~D~AYQGF~~Gle----eDa~~lR~~a~~~~--~~lva~S~SKnf-gLYgERVGa~~vva~~~~~a~~v~s 273 (396)
T COG1448 201 IKERGLIPFFDIAYQGFADGLE----EDAYALRLFAEVGP--ELLVASSFSKNF-GLYGERVGALSVVAEDAEEADRVLS 273 (396)
T ss_pred HHHcCCeeeeehhhhhhccchH----HHHHHHHHHHHhCC--cEEEEehhhhhh-hhhhhccceeEEEeCCHHHHHHHHH
Confidence 9999999999999999543322 22222233322222 389999999999 899999999998888888766654
Q ss_pred ---HH-hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 013892 378 ---KV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKANIGRC 433 (434)
Q Consensus 378 ---~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~ 433 (434)
.. +..+++||..+..++..+|+++ ++++.|.++.+.|+++|.+++..++..+
T Consensus 274 qlk~~iR~~ySnPP~~Ga~vva~IL~~p----~Lra~W~~El~~Mr~Ri~~mR~~lv~~L 329 (396)
T COG1448 274 QLKAIIRTNYSNPPAHGAAVVATILNNP----ELRAEWEQELEEMRQRILEMRQALVDAL 329 (396)
T ss_pred HHHHHHHhccCCCchhhHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 3489999999999999999996 7888888888888888888888777654
No 90
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-35 Score=291.75 Aligned_cols=268 Identities=18% Similarity=0.262 Sum_probs=220.6
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.++|+++.|.+.. ..++.+.+++.+.+... ....|++..|.+++|+++
T Consensus 28 ~~~i~l~~~~~~~-----------------------------~~~~~~~~a~~~~~~~~---~~~~y~~~~g~~~lr~~i 75 (380)
T PRK06225 28 KEMIWMGQNTNHL-----------------------------GPHEEVREAMIRCIEEG---EYCKYPPPEGFPELRELI 75 (380)
T ss_pred CCeEEccCCCCCC-----------------------------CCCHHHHHHHHHHHhcC---CCCCCCCCcchHHHHHHH
Confidence 4688888887665 45777888888887643 256799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecC-CCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD-EATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~ 255 (434)
++++ ++++++|++|+|+++++..+++.++ .+||+|++++|+|..+...++..|+++++++++ ++++|.+|++
T Consensus 76 a~~l------~~~~~~v~~~~g~t~al~~~~~~~~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~ 148 (380)
T PRK06225 76 LKDL------GLDDDEALITAGATESLYLVMRAFL-SPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPE 148 (380)
T ss_pred HHhc------CCCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHH
Confidence 9997 3578899999999999999999998 799999999999999999999999999999975 3446899999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
.+++.+++ ++++|+++||+||||.+++.+++++|+++|+++|+++|+||+|.++..+. .... .+.
T Consensus 149 ~l~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~----~~~~----~~~- 213 (380)
T PRK06225 149 LVKENMDE------NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH----TLAA----EYA- 213 (380)
T ss_pred HHHhhcCC------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC----Cchh----hcC-
Confidence 99998876 78999999999999999999999999999999999999999999864321 1111 111
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCC-CCChHHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPP-KVGDESYESYCAE 414 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~ 414 (434)
++ ++|++.||||.| |++|+|+||+++ ++++++.+........+.+.++|.++..++... ++.++.++.++++
T Consensus 214 --~~-~~i~~~s~SK~~-g~~G~RiG~i~~---~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 286 (380)
T PRK06225 214 --PE-HTVTSYSFSKIF-GMAGLRIGAVVA---TPDLIEVVKSIVINDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKN 286 (380)
T ss_pred --CC-CEEEEeechhhc-CCccceeEEEec---CHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 22 479999999999 899999999987 889999988765545578889999888877643 3445566667777
Q ss_pred HHHHHHHHHHH
Q 013892 415 RDGILSSLARR 425 (434)
Q Consensus 415 r~~l~~~L~~~ 425 (434)
++.+.+.|++.
T Consensus 287 ~~~l~~~L~~~ 297 (380)
T PRK06225 287 QKLIKEAVDEI 297 (380)
T ss_pred HHHHHHHHHhC
Confidence 77777777763
No 91
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8e-35 Score=288.52 Aligned_cols=249 Identities=24% Similarity=0.399 Sum_probs=203.1
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCE
Q 013892 138 GLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (434)
Q Consensus 138 ~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~ 217 (434)
..+|+.+++++.+.+... ....|++.. ..++|+++|+++ ++++++|++|+|+++++..++.+++ ++||+
T Consensus 34 ~~~p~~~~~a~~~~~~~~---~~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~it~G~~~~l~~~~~~l~-~~gd~ 102 (351)
T PRK14807 34 FELPEEVIKNIQEIVKSS---QVNIYPDPT-AEKLREELARYC------SVVPTNIFVGNGSDEIIHLIMLAFI-NKGDV 102 (351)
T ss_pred CCCCHHHHHHHHHHhhcC---cccCCCCcc-HHHHHHHHHHHh------CCCcccEEEecCHHHHHHHHHHHhc-CCCCE
Confidence 367899999988877642 256787654 799999999997 4678999999999999999999998 79999
Q ss_pred EEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
|++++|+|+.|...++..|++++.+++++ +|++|++.++++++.. ++++|+++|||||||.+++.+++.+++
T Consensus 103 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~- 174 (351)
T PRK14807 103 VIYPHPSFAMYSVYSKIAGAVEIPVKLKE--DYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKII- 174 (351)
T ss_pred EEEeCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHH-
Confidence 99999999999999999999999999864 4789999999988643 789999999999999999976666655
Q ss_pred HHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 298 ~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
++++.++|+||+|.++ + +. ...+ ... ..+ ++|+++||||.| |++|+|+||+++ ++++++.+.
T Consensus 175 --~~~~~~~ivDe~y~~~-~-~~-~~~~---~~~----~~~--~vi~~~S~SK~~-~~~GlRiG~~v~---~~~~~~~~~ 236 (351)
T PRK14807 175 --EKSRGIVVVDEAYFEF-Y-GN-TIVD---VIN----EFE--NLIVLRTLSKAF-GLAGLRVGYAVA---NENILKYLN 236 (351)
T ss_pred --HhCCCEEEEeCcchhh-c-cc-chHH---Hhh----hCC--CEEEEecchHhc-ccchhceeeeec---CHHHHHHHH
Confidence 4567889999999885 2 22 1211 111 112 489999999999 899999999987 999999998
Q ss_pred HHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 378 KVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 378 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.... .+.+.+.|.++..++++ .++++..+.++++|+.+.+.|++.
T Consensus 237 ~~~~~-~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~r~~l~~~l~~~ 282 (351)
T PRK14807 237 LVKSP-YNINSLSQVIALKVLRT-GVLKERVNYILNERERLIKELSKI 282 (351)
T ss_pred HccCC-CCcCHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 76543 46788999999999976 345667778888888888888653
No 92
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.6e-35 Score=286.60 Aligned_cols=243 Identities=21% Similarity=0.373 Sum_probs=197.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
.+|+.+++++.+.+... ....|++ .|.+++|+++++++ | +++++|++|+|+++++..++..+ +||+|
T Consensus 31 ~~~~~~~~~~~~~~~~~---~~~~Y~~-~g~~~lr~~ia~~~----~--~~~~~I~~t~G~~~~l~~~~~~~---~gd~V 97 (337)
T PRK03967 31 DLPEELKEEIFEELKRV---PFNRYPH-ITSDPLREAIAEFY----G--LDAENIAVGNGSDELISYLVKLF---EGKHI 97 (337)
T ss_pred CCCHHHHHHHHHHhhcC---ccccCCC-CCHHHHHHHHHHHh----C--cCcceEEEcCCHHHHHHHHHHHh---CCCeE
Confidence 56788999988887643 2567864 69999999999998 2 68899999999999999888765 69999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|+.|...++..|++++.+++++ +|++|++.+++.+ . ++++++++|||||||.+++.+++.+++
T Consensus 98 ~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~-~------~~~~v~~~~P~NPtG~~~~~~~l~~i~-- 166 (337)
T PRK03967 98 VITPPTFGMYSFYAKLNGIPVIDVPLKE--DFTIDGERIAEKA-K------NASAVFICSPNNPTGNLQPEEEILKVL-- 166 (337)
T ss_pred EEeCCChHHHHHHHHHcCCeEEEeecCC--CCCcCHHHHHHhc-c------CCCEEEEeCCCCCCCCCCCHHHHHHHH--
Confidence 9999999999999999999999999874 4789999998754 2 678999999999999999976666654
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
++++++|+||+|.++. +. +.. .... ..+ ++|+++||||.| |++|+|+||+++ ++++++.+.+
T Consensus 167 --~~~~~ii~De~y~~~~--~~-~~~---~~~~----~~~--~vi~l~S~SK~~-~l~GlRiG~iv~---~~~~i~~~~~ 228 (337)
T PRK03967 167 --ETGKPVVLDEAYAEFS--GK-SLI---GLID----EYP--NLILLRTFSKAF-GLAGIRAGYAIA---NEEIIDALYR 228 (337)
T ss_pred --hcCCEEEEECchhhhc--cc-chH---HHHh----hCC--CEEEEecchHhh-cchhhhheeeec---CHHHHHHHHh
Confidence 4699999999999954 21 111 1111 113 489999999999 899999999987 8999999988
Q ss_pred HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 379 VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 379 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
....+ +.+.++|.++..++++.++..+.++.+.++|+.+.+.|.+
T Consensus 229 ~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 273 (337)
T PRK03967 229 IKPPF-SLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGE 273 (337)
T ss_pred hcCCC-CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 77544 6789999999999987655556667777888888877765
No 93
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.3e-34 Score=288.70 Aligned_cols=264 Identities=18% Similarity=0.241 Sum_probs=218.0
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.+++++++|.+.. ++|+.+++++.+.+.. ...|++.. ..++|+++
T Consensus 32 ~~~i~l~~~~~~~-----------------------------~~~~~~~~a~~~~~~~-----~~~y~~~~-~~~lr~~i 76 (367)
T PRK02731 32 ADIIKLASNENPL-----------------------------GPSPKAIEAIRAAADE-----LHRYPDGS-GFELKAAL 76 (367)
T ss_pred CceEEecCCCCCC-----------------------------CCCHHHHHHHHHHHHh-----hcCCCCCc-HHHHHHHH
Confidence 5789999987665 3467788888777653 45688765 47899999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
|+++ ++++++|++|+|+++++..++..++ ++||.|++++|+|..|...++..|++++.++++ +|++|++.
T Consensus 77 a~~~------~~~~~~i~~t~G~~~~l~~~~~~l~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~~~~~ 146 (367)
T PRK02731 77 AEKF------GVDPERIILGNGSDEILELLARAYL-GPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAK---DYGHDLDA 146 (367)
T ss_pred HHHh------CcCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEEecCCHHHHHHHHHHcCCeEEEeccc---CCCCCHHH
Confidence 9997 3578899999999999999999988 799999999999999999889999999999873 46899999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++.+++ ++++|+++|||||||.+++.+++++|++.|+ +|+++|+||+|.++.+++.. ..++ .... .
T Consensus 147 l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~-~~~~-~~~~----~ 213 (367)
T PRK02731 147 MLAAVTP------RTRLVFIANPNNPTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDY-EDGL-ELVA----K 213 (367)
T ss_pred HHHHhCC------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCc-ccHH-HHHh----h
Confidence 9998865 7899999999999999999999999998875 69999999999998876532 2222 2211 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
.+ ++|+++||||.| |++|+|+||+++ ++++++.+.+.... .+.+.++|.++..++++.++.++.++.++++++
T Consensus 214 ~~--~~i~~~S~SK~~-g~~G~RiG~l~~---~~~~~~~l~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 286 (367)
T PRK02731 214 FP--NVVVTRTFSKAY-GLAGLRVGYGIA---PPEIIDALNRVRQP-FNVNSLALAAAVAALDDDAFVEKSRALNAEGMA 286 (367)
T ss_pred cC--CEEEEeeehHhh-cCcccceeeeeC---CHHHHHHHHHccCC-CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 13 489999999999 889999999987 88999998876653 356789999999999876666778888888888
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|++.
T Consensus 287 ~l~~~L~~~ 295 (367)
T PRK02731 287 WLTEFLAEL 295 (367)
T ss_pred HHHHHHHHC
Confidence 888888765
No 94
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=6.8e-35 Score=289.17 Aligned_cols=252 Identities=21% Similarity=0.271 Sum_probs=204.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
++|+.+.+++.+.+.. ...|+ ..|..++|+++|+++ ++++++|++|+|+++++..++..++ ++||.|
T Consensus 35 ~~~~~~~~a~~~~~~~-----~~~y~-~~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~~~~~~~~-~~gd~V 101 (352)
T PRK03321 35 GPLPSVRAAIARAAAG-----VNRYP-DMGAVELRAALAEHL------GVPPEHVAVGCGSVALCQQLVQATA-GPGDEV 101 (352)
T ss_pred CCCHHHHHHHHHHHHh-----cCcCC-CCcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHHHHHHHhc-CCCCEE
Confidence 4577788888777653 45575 479999999999998 2678899999999999999999888 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|..|...++..|++++.++++++ +++|++.+++++++ ++++++++|||||||.+++.+++.++++.
T Consensus 102 li~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~l~~l~~~ 173 (352)
T PRK03321 102 IFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITD------RTRLIFVCNPNNPTGTVVTPAELARFLDA 173 (352)
T ss_pred EeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhcc------CCCEEEEeCCCCCcCCCcCHHHHHHHHHh
Confidence 99999999999999999999999998743 58899999998875 78999999999999999998888888776
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
+ +++++||+||+|+++.+++.. ..++ .. +. ..+ ++|+++||||.| |++|+|+||+++ ++++++.+.+
T Consensus 174 ~-~~~~~ii~De~y~~~~~~~~~-~~~~-~~---~~-~~~--~vi~~~S~SK~~-g~~GlRiG~~v~---~~~~~~~~~~ 240 (352)
T PRK03321 174 V-PADVLVVLDEAYVEYVRDDDV-PDGL-EL---VR-DHP--NVVVLRTFSKAY-GLAGLRVGYAVG---HPEVIAALRK 240 (352)
T ss_pred C-CCCeEEEEechHHHhccCcCC-CcHH-HH---Hh-hCC--CEEEEecchHHh-hhHHHhhhhhcC---CHHHHHHHHH
Confidence 5 469999999999998886532 1222 11 11 112 489999999999 899999999987 8999999987
Q ss_pred HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 379 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.. ...+.+.+.|.++..++...+...+..+.+.++|+.+.+.|++.
T Consensus 241 ~~-~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~ 286 (352)
T PRK03321 241 VA-VPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA 286 (352)
T ss_pred hc-CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 64 34578999999888888654444555666677777787877764
No 95
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-34 Score=284.58 Aligned_cols=254 Identities=20% Similarity=0.294 Sum_probs=203.4
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.++|++++|+|.+ ++|+.+++++.+.+... ....|++. |.++||+++
T Consensus 19 ~~~i~l~~~~~~~-----------------------------~~p~~~~~~~~~~~~~~---~~~~Y~~~-~~~~Lr~ai 65 (335)
T PRK14808 19 RDRTYLALNENPF-----------------------------PFPEDLVDEVFRRLNSD---TLRIYYDS-PDEELIEKI 65 (335)
T ss_pred CceeEecCCCCCC-----------------------------CCCHHHHHHHHHHhhhh---hhhcCCCC-ChHHHHHHH
Confidence 4788888888876 56888999988776532 13447665 899999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
++|+.++ + +++++|++|+|+++++..+++.+ |.|++++|+|+.|...++..|++++.++++++ |.++...
T Consensus 66 a~~~~~~-~--~~~~~i~it~Ga~~~i~~~~~~~-----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~ 135 (335)
T PRK14808 66 LSYLDTD-F--LSKNNVSVGNGADEIIYVMMLMF-----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN 135 (335)
T ss_pred HHHhCCC-C--CCcceEEEcCCHHHHHHHHHHHh-----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH
Confidence 9999664 2 68999999999999999999876 57999999999999999999999999998754 4444322
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+ . ++++++++|||||||.+++.+++++|+ +++++||+||+|.++. +. .+. .... .
T Consensus 136 ----~-~------~~~~i~i~nP~NPTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~--~~-~~~---~~~~----~ 190 (335)
T PRK14808 136 ----V-G------EGDVVFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYEFH--GE-SYV---DLLK----K 190 (335)
T ss_pred ----c-c------CCCEEEEeCCCCCCCCCcCHHHHHHHH----hcCCEEEEECchhhhc--CC-chH---HHHH----h
Confidence 1 1 468999999999999999988888876 4799999999999953 22 122 2222 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
.+ ++|+++||||.| |++|+|+||+++ ++++++.+.+... ..+.+.+.|.++..++++.++..+..+.+.++|+
T Consensus 191 ~~--~vi~~~S~SK~~-~l~GlRvG~~v~---~~~~~~~l~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~ 263 (335)
T PRK14808 191 YE--NLAVIRTFSKAF-SLAAQRIGYVVS---SEKFIDAYNRVRL-PFNVSYVSQMFAKVALDHREIFEERTKFIVEERE 263 (335)
T ss_pred CC--CEEEEEechhhc-cCcccceEEEEe---CHHHHHHHHHhcC-CCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 23 489999999999 899999999987 8899999987663 3577889999999999865555666778888888
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|++.
T Consensus 264 ~l~~~L~~~ 272 (335)
T PRK14808 264 RMKSALREM 272 (335)
T ss_pred HHHHHHHHC
Confidence 888888765
No 96
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-34 Score=288.27 Aligned_cols=236 Identities=22% Similarity=0.324 Sum_probs=196.3
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCe
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGT 238 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~ 238 (434)
...|++.. ..+||+++|+++ ++++++|++|+|+++++.+++.+++ .+| |.|++++|+|..|...++..|++
T Consensus 53 ~~~Y~~~~-~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~~~~~~~-~~g~~~vlv~~p~y~~~~~~~~~~g~~ 124 (364)
T PRK04781 53 TRRYPDPQ-PPGLRSALAALY------GCAPEQLLIGRGSDEAIDLLVRALC-VPGRDAVLVTPPVFGMYAVCARLQNAP 124 (364)
T ss_pred hccCCCCC-HHHHHHHHHHHh------CcChHHEEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChHHHHHHHHHcCCE
Confidence 45688765 799999999997 3688999999999999999999998 688 79999999999999999999999
Q ss_pred EEEEecCC-CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCcc
Q 013892 239 LVPYYLDE-ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (434)
Q Consensus 239 ~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 317 (434)
++.+++++ +++|.+|++++.+.+... ++++|+++|||||||.+++.+++++|+++|+ ++++||+||+|.+|.+
T Consensus 125 ~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~ 198 (364)
T PRK04781 125 LVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSD 198 (364)
T ss_pred EEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcC
Confidence 99999853 456888999987655332 7899999999999999999999999999885 4799999999999765
Q ss_pred CCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHH
Q 013892 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLV 397 (434)
Q Consensus 318 ~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~ 397 (434)
.. +...... .++ ++|+++||||.| |++|+|+||+++ ++++++.+.+....+ +.+.+.|.++..+
T Consensus 199 ~~-----~~~~~~~----~~~--~vi~~~SfSK~~-gl~GlRvGy~v~---~~~l~~~l~~~~~~~-~~~~~~~~~a~~~ 262 (364)
T PRK04781 199 VP-----SAVGLLA----RYD--NLAVLRTLSKAH-ALAAARIGSLIA---NAELIAVLRRCQAPY-PVPTPCAALAEQA 262 (364)
T ss_pred Cc-----chHHHHh----hCC--CEEEEecChhhc-ccccceeeeeeC---CHHHHHHHHhccCCC-CCCHHHHHHHHHH
Confidence 32 1112221 223 489999999999 899999999987 999999998877544 6788899999889
Q ss_pred cCCCC--CChHHHHHHHHHHHHHHHHHHHH
Q 013892 398 MSPPK--VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 398 l~~~~--~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++.. +..+..+.++++|+.+.+.|+++
T Consensus 263 l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 292 (364)
T PRK04781 263 LSAPALAVTARRVAEVRAERERLHAALAQL 292 (364)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 98752 34566678899999999999765
No 97
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-35 Score=290.03 Aligned_cols=232 Identities=23% Similarity=0.360 Sum_probs=194.2
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCe
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGT 238 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~ 238 (434)
...|++.. ..++++++++++ | +++++|++|+|+++++.+++++++ ++| |.|+++.|+|+.|...++..|++
T Consensus 51 ~~~Yp~~~-~~~l~~~~a~~~----g--~~~~~I~~~~Gs~e~i~~~~~~~~-~~g~~~vli~~P~y~~y~~~~~~~G~~ 122 (351)
T PRK01688 51 LNRYPECQ-PKAVIENYAAYA----G--VKPEQVLVSRGADEGIELLIRAFC-EPGKDAILYCPPTYGMYSVSAETIGVE 122 (351)
T ss_pred cccCCCCC-hHHHHHHHHHHh----C--CCHHHEEEcCCHHHHHHHHHHHhc-CCCCCEEEEcCCCHHHHHHHHHHcCCE
Confidence 56687765 578888888886 3 689999999999999999999998 686 89999999999999999999999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccC
Q 013892 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (434)
Q Consensus 239 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 318 (434)
++.+++++ +|++|++++++++ + ++++|+++|||||||.+++.+++++|++.|++ +++||+||+|.+|...
T Consensus 123 ~~~v~~~~--~~~~d~~~l~~~~-~------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~ 192 (351)
T PRK01688 123 IRTVPTLD--NWQLDLPAIADNL-D------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQ 192 (351)
T ss_pred EEEeecCC--CCCCCHHHHHHhc-c------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCC
Confidence 99999864 4899999998877 3 68999999999999999999999999999976 6889999999996421
Q ss_pred CCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHc
Q 013892 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVM 398 (434)
Q Consensus 319 ~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l 398 (434)
.+...... .+++ +|+++||||.| |++|+|+||+++ ++++++.+.+....+ +.+.+.|.++..+|
T Consensus 193 -----~s~~~~~~----~~~n--~iv~rSfSK~~-glaGlRiGy~i~---~~~~i~~l~~~~~~~-~v~~~~~~~a~~~L 256 (351)
T PRK01688 193 -----ASLAGWLA----EYPH--LVILRTLSKAF-ALAGLRCGFTLA---NEEVINLLLKVIAPY-PLSTPVADIAAQAL 256 (351)
T ss_pred -----CChHHHHh----hCCC--EEEEecchHhh-cCHHHHHhHHhC---CHHHHHHHHhccCCC-CCCHHHHHHHHHHH
Confidence 12223322 2344 89999999999 899999999987 999999998876544 57777888888888
Q ss_pred CCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 399 SPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 399 ~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+. ++.++.++.+.++|+.+.+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 285 (351)
T PRK01688 257 SPQGIAAMRERVAEINANRQWLIAALKEI 285 (351)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 754 356677788888999999988765
No 98
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=2.9e-34 Score=283.95 Aligned_cols=262 Identities=22% Similarity=0.360 Sum_probs=217.3
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|++.. ..|+.+++++.+++.. ...|++..| +++|+++
T Consensus 19 ~~~i~l~~~~~~~-----------------------------~~~~~~~~a~~~~~~~-----~~~y~~~~~-~~lr~~i 63 (346)
T TIGR01141 19 KEVIKLNSNENPF-----------------------------GPPPKAKEALRAEADK-----LHRYPDPDP-AELKQAL 63 (346)
T ss_pred CceEEccCCCCCC-----------------------------CCCHHHHHHHHHhHHH-----hhcCCCCCH-HHHHHHH
Confidence 5788999888765 4688899998887643 456888776 8999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
|+++. +++++|++|+|+++++..++..++ ++||+|++++|+|+.|...++..|++++.++++++ +.+|++.
T Consensus 64 a~~~~------~~~~~i~~~~G~~~~l~~~~~~l~-~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~ 134 (346)
T TIGR01141 64 ADYYG------VDPEQILLGNGSDEIIELLIRAFL-EPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLED 134 (346)
T ss_pred HHHhC------cChHHEEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHH
Confidence 99982 578899999999999999999988 79999999999999999899999999999998754 5799999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++++++ ++++|++++|+||||.+++.++++++++.|+ +|+++|+||+|.++.+.+. +. .... .
T Consensus 135 l~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~--~~---~~~~----~ 198 (346)
T TIGR01141 135 ILVAIDD------KPKLVFLCSPNNPTGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEPS--TL---PLLA----E 198 (346)
T ss_pred HHHhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCcc--HH---HHHh----h
Confidence 9987654 7899999999999999999999999988887 7999999999998654321 11 1111 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
.+ ++|+++|+||.| |++|+|+||+++ ++++++++...... .+.+.++|.++..+++...+.++.++.++++++
T Consensus 199 ~~--~~i~~~S~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 271 (346)
T TIGR01141 199 YP--NLIVLRTLSKAF-GLAGLRIGYAIA---NAEIIDALNKVRAP-FNLSRLAQAAAIAALRDDDFIEKTVEEINAERE 271 (346)
T ss_pred CC--CEEEEehhhHhh-hchhhhceeeec---CHHHHHHHHhccCC-CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 12 379999999999 789999999987 89999998876543 467888999988888775556778888999999
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|+++
T Consensus 272 ~l~~~L~~~ 280 (346)
T TIGR01141 272 RLYDGLKKL 280 (346)
T ss_pred HHHHHHHhc
Confidence 999988765
No 99
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=3.3e-33 Score=274.55 Aligned_cols=216 Identities=20% Similarity=0.258 Sum_probs=179.5
Q ss_pred CCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEE
Q 013892 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPY 242 (434)
Q Consensus 163 Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~ 242 (434)
|+.. ..+||++|++++ | +++|++|+|++++|.+++. + .+||+|++++|+|+.|...++..|++++.+
T Consensus 47 yp~~--~~~Lr~~ia~~~----~----~~~I~it~Gs~~al~~~~~--~-~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v 113 (330)
T PRK05664 47 LPET--DDGLEAAARAYY----G----APQLLPVAGSQAAIQALPR--L-RAPGRVGVLSPCYAEHAHAWRRAGHQVREL 113 (330)
T ss_pred CCCC--hHHHHHHHHHHh----C----CCCEEECcCHHHHHHHHHH--c-cCCCEEEEcCCChHHHHHHHHHcCCeEEEe
Confidence 6653 389999999997 2 4799999999999998863 4 699999999999999999999999999998
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCC
Q 013892 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (434)
Q Consensus 243 ~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 322 (434)
+++ ++++.++ ++++++++|||||||.+++.+++++|+++|+++|++||+||+|.++. .
T Consensus 114 ~~~----------~~~~~~~-------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~--~--- 171 (330)
T PRK05664 114 DEA----------EVEAALD-------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT--P--- 171 (330)
T ss_pred chh----------hHhhhhc-------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC--C---
Confidence 753 3444442 57789999999999999999999999999999999999999998743 2
Q ss_pred ccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCC
Q 013892 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPK 402 (434)
Q Consensus 323 ~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~ 402 (434)
..++.. +. .++ ++|+++||||.| |+||+|+||+++ ++++++.+.+....+ +.+.+.|.++..+|++..
T Consensus 172 ~~s~~~----~~-~~~--~vi~~~SfSK~~-gl~GlRiG~~v~---~~~l~~~~~~~~~~~-~~~~~~~~~~~~~L~~~~ 239 (330)
T PRK05664 172 QHSLAA----CA-HRP--GLIVLRSFGKFF-GLAGARLGFVLA---EPALLRALAELLGPW-TVSGPTRWLAQAALADTP 239 (330)
T ss_pred cccccc----cc-cCC--CEEEEeeccccc-cCCCcceEEEEe---CHHHHHHHHHhcCCC-CCCHHHHHHHHHHHhChH
Confidence 122222 22 122 489999999999 899999999987 899999998775433 567889999999998766
Q ss_pred CChHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.+..++.++++|+.+.+.|++.
T Consensus 240 ~~~~~~~~~~~~r~~l~~~L~~~ 262 (330)
T PRK05664 240 WQRRQRERLLAASQRLAALLRRH 262 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Confidence 66778899999999999999875
No 100
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.2e-33 Score=276.58 Aligned_cols=220 Identities=20% Similarity=0.272 Sum_probs=181.4
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEE
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLV 240 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 240 (434)
..|++.. .+||+++|+++ |+. ++++|++|+|+++++..+.. ++ ++|+ |+++.|+|+.|...++..|++++
T Consensus 49 ~~Yp~~~--~~L~~~ia~~~----~~~-~~~~I~i~~Gs~e~i~~l~~-~~-~~g~-v~v~~P~y~~y~~~~~~~g~~~~ 118 (339)
T PRK06959 49 RRLPEDD--DGLAACAARYY----GAP-DAAHVLPVAGSQAAIRALPA-LL-PRGR-VGIAPLAYSEYAPAFARHGHRVV 118 (339)
T ss_pred HhCCCch--HHHHHHHHHHh----CCC-CcccEEECcCHHHHHHHHHH-hc-CCCe-EEEcCCCcHHHHHHHHHCCCEEE
Confidence 3487653 89999999987 432 45899999999999997765 45 6776 89999999999999999999999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCC
Q 013892 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE 320 (434)
Q Consensus 241 ~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 320 (434)
.+++++ +. +.+ .+++++++|||||||.+++.+++++|++.|++++.++|+||+|.++.+.
T Consensus 119 ~v~~~~--------~~----~~~------~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~-- 178 (339)
T PRK06959 119 PLDEAA--------DT----LPA------ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA-- 178 (339)
T ss_pred eecccc--------hh----ccc------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc--
Confidence 987653 11 222 4678999999999999999999999999999999999999999996532
Q ss_pred CCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCC
Q 013892 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSP 400 (434)
Q Consensus 321 ~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~ 400 (434)
.++... . ..++ +|+++||||.| |++|+|+||+++ ++++++.+.+....+ +.+.+.|.++..++++
T Consensus 179 ---~s~~~~----~-~~~~--vi~l~SfSK~~-gl~GlRiGy~v~---~~~li~~l~~~~~~~-~vs~~~q~a~~~~L~~ 243 (339)
T PRK06959 179 ---ASLAAH----T-DRPG--LVVLRSVGKFF-GLAGVRAGFVLA---APALLAALRDALGAW-TVSGPARHAVRAAFAD 243 (339)
T ss_pred ---ccchhc----c-CCCC--EEEEecChhhc-CCcchheEEEec---CHHHHHHHHHhcCCC-CCcHHHHHHHHHHhCc
Confidence 122211 1 1233 79999999999 899999999987 899999998876544 5788999999999998
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 401 PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 401 ~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.++.++.++.++++|+.+.+.|+++
T Consensus 244 ~~~~~~~~~~~~~~r~~l~~~L~~~ 268 (339)
T PRK06959 244 AAWQAAMRERLAADGARLAALLRAH 268 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 7777888999999999999999876
No 101
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=9.3e-33 Score=273.55 Aligned_cols=240 Identities=19% Similarity=0.228 Sum_probs=192.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
.+|+.+++++.+.+.. ...|++..|..++|+++++++ ++++++|++|+|+++++.++++ + .+ +.|
T Consensus 35 ~~~~~~~~~~~~~~~~-----~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al~~~~~-l--~~-~~v 99 (349)
T PRK07908 35 TPPEWLRERLAARLGD-----LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGFALLAR-L--RP-RRA 99 (349)
T ss_pred CCCHHHHHHHHHHhhH-----hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHHHHHHh-c--CC-CeE
Confidence 6788889888887754 456999999999999999997 3688999999999999999988 4 46 467
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|..+...++..|++++.++++++ |++|++.++ + ++++++++|||||||.+++.+++. ++
T Consensus 100 iv~~P~y~~~~~~~~~~G~~i~~v~~~~~--~~~d~~~l~----~------~~~~i~l~np~NPTG~~~~~~~l~---~l 164 (349)
T PRK07908 100 AVVHPSFTEPEAALRAAGIPVHRVVLDPP--FRLDPAAVP----D------DADLVVIGNPTNPTSVLHPAEQLL---AL 164 (349)
T ss_pred EEeCCCChHHHHHHHHcCCEEEeeccCcc--cCcChhHhc----c------CCCEEEEcCCCCCCCCCcCHHHHH---HH
Confidence 78899999999999999999999999754 788988552 2 688999999999999999976554 55
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
|+ ++.++|+||+|.+++++ . ..++.. .. .+ ++|+++||||.| |++|+|+||+++ ++++++.+.+
T Consensus 165 ~~-~~~~iIvDe~y~~~~~~-~--~~~l~~----~~--~~--~~i~i~S~SK~~-~l~GlRiG~~~~---~~~~~~~~~~ 228 (349)
T PRK07908 165 RR-PGRILVVDEAFADAVPG-E--PESLAG----DD--LP--GVLVLRSLTKTW-SLAGLRVGYALG---APDVLARLTR 228 (349)
T ss_pred Hh-cCCEEEEECcchhhccC-C--cccccc----cc--CC--CEEEEeeccccc-CCccceeeeeec---CHHHHHHHHh
Confidence 54 47889999999997543 2 233322 11 12 489999999999 899999999987 8999999887
Q ss_pred HhhcccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VASVNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 379 ~~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.... ...+.+.+.++..++.+. +++++.++.++++|+.+.+.|+++
T Consensus 229 ~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 276 (349)
T PRK07908 229 GRAH-WPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV 276 (349)
T ss_pred cCCC-CCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6543 356677888888887743 456678888999999999998875
No 102
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.9e-33 Score=277.48 Aligned_cols=257 Identities=19% Similarity=0.278 Sum_probs=206.3
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|++.. .+++.+++++.+.+.. ...|++.. .+++|+++
T Consensus 34 ~~~i~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~-----~~~y~~~~-~~~lr~~i 78 (361)
T PRK00950 34 ESIIKLGSNENPL-----------------------------GPSPKAVEAIEKELSK-----IHRYPEPD-APELREAL 78 (361)
T ss_pred cceEEccCCCCCC-----------------------------CCCHHHHHHHHHHHHh-----hcCCCCCC-HHHHHHHH
Confidence 4788888887654 4577788888776654 34687765 49999999
Q ss_pred HHHHHhhcCCCCCCCCEEE-cCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPNDIFL-TDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~-t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
|+++ ++++++|++ |+|+++++..+++.++ ++||.|+++.|+|+.|...++..|++++.++.+ ++|++|++
T Consensus 79 a~~~------~~~~~~i~~~~~Ga~~~i~~~~~~~~-~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~ 149 (361)
T PRK00950 79 SKYT------GVPVENIIVGGDGMDEVIDTLMRTFI-DPGDEVIIPTPTFSYYEISAKAHGAKPVYAKRE--EDFSLDVD 149 (361)
T ss_pred HHHh------CCCHHHEEEeCCCHHHHHHHHHHHhc-CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHH
Confidence 9997 367889999 7899999999999888 799999999999999999999999999999854 45899999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
.+++.+++ +++++++++|+||||.+++.+++ .++|+++|+++|+||+|.++. +. ... ....
T Consensus 150 ~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l---~~l~~~~~~~li~De~y~~~~--~~-~~~---~~~~---- 210 (361)
T PRK00950 150 SVLNAITE------KTKVIFLCTPNNPTGNLIPEEDI---RKILESTDALVFVDEAYVEFA--EY-DYT---PLAL---- 210 (361)
T ss_pred HHHHHhcc------CCCEEEEeCCCCCCCCCcCHHHH---HHHHHHCCcEEEEECchhhhC--cc-chH---HHHH----
Confidence 99998865 78999999999999999996555 455667899999999999864 21 111 2222
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r 415 (434)
..+ ++|+++||||.| |++|+|+||+++ ++++++.+.+....+ +.+.+.|.++..++.+.+++++..+.++++|
T Consensus 211 ~~~--~vi~~~S~SK~~-g~~GlRiG~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r 283 (361)
T PRK00950 211 EYD--NLIIGRTFSKVF-GLAGLRIGYGFV---PEWLIDYYMRAKTPF-SLTRLSQAAAIAALSDKEYIEKSIEHGIKSR 283 (361)
T ss_pred hcC--CEEEEEeehHhh-cCchhhcchhcC---CHHHHHHHHHhcCCC-CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 112 479999999999 899999999987 899999888766543 5778899988888887656677777888888
Q ss_pred HHHHHHHH
Q 013892 416 DGILSSLA 423 (434)
Q Consensus 416 ~~l~~~L~ 423 (434)
+.+.+.|.
T Consensus 284 ~~l~~~l~ 291 (361)
T PRK00950 284 EYLYNELP 291 (361)
T ss_pred HHHHhhcC
Confidence 88877664
No 103
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-33 Score=280.40 Aligned_cols=230 Identities=19% Similarity=0.295 Sum_probs=189.8
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCe
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGT 238 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~ 238 (434)
...|++. +..+||+++|+++ ++++++|++|+|+++++.++++.++ ++| |+|+++.|+|+.|...++..|++
T Consensus 54 ~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i~~~~~~~~-~~g~d~vlv~~P~y~~y~~~~~~~g~~ 125 (354)
T PRK04635 54 LNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAIELLIRAFC-EPGQDSIACFGPTYGMYAISAETFNVG 125 (354)
T ss_pred hccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChHHHHHHHHHcCCE
Confidence 5569876 4899999999986 4789999999999999999999998 688 89999999999999999999999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccC
Q 013892 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (434)
Q Consensus 239 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 318 (434)
++.+++++ +|.+|++.++. + + ++|+|+++|||||||.+++.+++++|+++|+ +++||+||+|.++...
T Consensus 126 v~~v~~~~--~~~~~~~~l~~-~-~------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~ 193 (354)
T PRK04635 126 VKALPLTA--DYQLPLDYIEQ-L-D------GAKLVFICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPE 193 (354)
T ss_pred EEEEecCC--CCCCCHHHHHh-c-c------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccC
Confidence 99999874 47889988863 3 2 7899999999999999999999999998876 4999999999985422
Q ss_pred CCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHc
Q 013892 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVM 398 (434)
Q Consensus 319 ~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l 398 (434)
.+...... .+++ +|+++||||.| |++|+|+||+++ ++++++.+.+.... .+.+.+.|.++..++
T Consensus 194 -----~s~~~~~~----~~~~--~iv~~S~SK~~-~l~GlRlG~~i~---~~~~~~~l~~~~~~-~~~~~~~~~~a~~~l 257 (354)
T PRK04635 194 -----YSVADLLA----SYPN--LVVLRTLSKAF-ALAGARCGFTLA---NEELIEILMRVIAP-YPVPLPVSEIATQAL 257 (354)
T ss_pred -----cchHHHHh----hCCC--EEEEechHHHh-hhhHHHHhhhhC---CHHHHHHHHhhcCC-CCCCHHHHHHHHHHH
Confidence 12222222 2234 79999999999 899999999987 89999998776543 366777888888888
Q ss_pred CCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 399 SPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 399 ~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+. +++++..+.++++|+.+.+.|++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 286 (354)
T PRK04635 258 SEAGLARMKFQVLDLNAQGARLQAALSMY 286 (354)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 653 335566778888999999998875
No 104
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.6e-33 Score=273.82 Aligned_cols=229 Identities=15% Similarity=0.202 Sum_probs=179.8
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeE
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL 239 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 239 (434)
...|+... ..+||+++|+++ ++++++|++|+|+++++..++.. + ++| .|++++|+|+.|...++..|+++
T Consensus 34 ~~~Yp~~~-~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~~~~~-~-~~~-~vv~~~P~y~~y~~~~~~~G~~v 103 (332)
T PRK06425 34 ISIYPEIS-YTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYRLLSY-I-NVG-NIIIVEPNFNEYKGYAFTHGIRI 103 (332)
T ss_pred cccCcCcC-HHHHHHHHHHHh------CCCcceEEECCCHHHHHHHHHHH-h-CCC-cEEEeCCChHHHHHHHHHcCCeE
Confidence 45687665 899999999997 46789999999999999999974 5 576 57777999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 013892 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (434)
Q Consensus 240 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~ 319 (434)
+.+|+++ +++|.+.++ .. ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++
T Consensus 104 ~~vp~~~---~~~~~~~l~----~~-----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~ 171 (332)
T PRK06425 104 SALPFNL---INNNPEILN----NY-----NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR 171 (332)
T ss_pred EEEeCCc---ccCcHHHHh----hc-----CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc
Confidence 9999874 355655443 21 68999999999999999999999999999999999999999999987643
Q ss_pred CCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcC
Q 013892 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMS 399 (434)
Q Consensus 320 ~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~ 399 (434)
. .+...... .++ ++|+++||||.| |+||+|+||+++ ++++++.+.+....+ ..+...+.++.. ..
T Consensus 172 ~---~~~~~~~~----~~~--~vi~~~SfSK~~-~l~GlRiGy~v~---~~~li~~l~~~~~~~-~~~~~~~~~l~~-~~ 236 (332)
T PRK06425 172 A---EEDVLLNR----SYG--NVIIGRSLTKIL-GIPSLRIGYIAT---DDYNMKISRKITEPW-SVCDPAIDFIRS-ID 236 (332)
T ss_pred c---hhHHHHhc----cCC--CEEEEeecHHhc-CCchhhheeeec---CHHHHHHHHHcCCCC-ccCHHHHHHHHH-hh
Confidence 2 23322221 223 589999999999 899999999987 899999988765433 333333332221 12
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 400 PPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 400 ~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
...+.++.++.++++|+.+.+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~r~~l~~~L~~~ 262 (332)
T PRK06425 237 LDYVAKHSLDIMENERSYLINNLEAM 262 (332)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 22334577889999999999999875
No 105
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=4.6e-32 Score=264.29 Aligned_cols=203 Identities=18% Similarity=0.286 Sum_probs=162.9
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
|+.+.+++.+.+.. ...|+. ...+|+++++++ | ++|++|+|+++++..++..+ .+||+|++
T Consensus 22 p~~~~~a~~~~~~~-----~~~yp~---~~~l~~~ia~~~----~-----~~I~vt~G~~~al~~~~~~~--~~gd~vlv 82 (311)
T PRK08354 22 PEWLDEMFERAKEI-----SGRYTY---YEWLEEEFSKLF----G-----EPIVITAGITEALYLIGILA--LRDRKVII 82 (311)
T ss_pred CHHHHHHHHHHHHH-----hhcCCC---hHHHHHHHHHHH----C-----CCEEECCCHHHHHHHHHHhh--CCCCeEEE
Confidence 56677777766553 346764 467899999886 2 47999999999999888544 48999999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
++|+|+.|...++..|++++.+ .+|++.|++.++ ++++++++|||||||.+++.+++++|+++|+
T Consensus 83 ~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~-------~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~ 147 (311)
T PRK08354 83 PRHTYGEYERVARFFAARIIKG--------PNDPEKLEELVE-------RNSVVFFCNPNNPDGKFYNFKELKPLLDAVE 147 (311)
T ss_pred eCCCcHHHHHHHHHcCCEEeec--------CCCHHHHHHhhc-------CCCEEEEecCCCCCCCccCHHHHHHHHHHhh
Confidence 9999999999999999999765 457888887764 3568999999999999999999999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh
Q 013892 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (434)
Q Consensus 301 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 380 (434)
++|+++|+||+|.++.+++. ..+ .+ ++|+++||||.| |++|+|+||+++ +++.+.+..
T Consensus 148 ~~~~~li~De~y~~f~~~~~--~~~-----------~~--~vi~~~S~SK~~-~l~GlRiG~~v~------~~~~l~~~~ 205 (311)
T PRK08354 148 DRNALLILDEAFIDFVKKPE--SPE-----------GE--NIIKLRTFTKSY-GLPGIRVGYVKG------FEEAFRSVR 205 (311)
T ss_pred hcCcEEEEeCcchhcccccc--ccC-----------CC--cEEEEeccHhhc-CCccceeeeeee------hHHHHHHcC
Confidence 99999999999999887642 110 12 489999999999 899999999975 455665554
Q ss_pred hcccCCchHHHHHHHHHcCC
Q 013892 381 SVNLCSNISGQILASLVMSP 400 (434)
Q Consensus 381 ~~~~~~~~~~q~~~~~~l~~ 400 (434)
..+ ..+..++.++..++++
T Consensus 206 ~~~-~~~~~~~~~~~~~~~~ 224 (311)
T PRK08354 206 MPW-SIGSTGYAFLEFLIED 224 (311)
T ss_pred CCc-cCCHHHHHHHHHHHHh
Confidence 333 4566778888777763
No 106
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1.3e-31 Score=263.32 Aligned_cols=225 Identities=22% Similarity=0.294 Sum_probs=189.7
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeE
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL 239 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 239 (434)
...|++..| +++|+++++++ | +++++|++|+|+++++..+.+.+ .+| .|++++|+|..|...++..|.++
T Consensus 41 ~~~y~~~~~-~~lr~~la~~~----~--~~~~~i~~t~G~~~~i~~~~~~l--~~g-~vl~~~p~y~~~~~~~~~~g~~~ 110 (330)
T TIGR01140 41 WARYPDPEY-DELRAAAAAYY----G--LPAASVLPVNGAQEAIYLLPRLL--APG-RVLVLAPTYSEYARAWRAAGHEV 110 (330)
T ss_pred HhhCCCccH-HHHHHHHHHHh----C--CChhhEEECCCHHHHHHHHHHHh--CCC-eEEEeCCCcHHHHHHHHHcCCEE
Confidence 567888775 99999999997 3 56899999999999999987765 577 79999999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 013892 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (434)
Q Consensus 240 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~ 319 (434)
+.++ |++.+++.++ +++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+..
T Consensus 111 ~~~~---------d~~~l~~~~~-------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~ 174 (330)
T TIGR01140 111 VELP---------DLDRLPAALE-------ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA 174 (330)
T ss_pred EEeC---------CHHHHHhhcc-------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc
Confidence 9886 6888888773 46789999999999999999999999999999999999999999876531
Q ss_pred CCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcC
Q 013892 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMS 399 (434)
Q Consensus 320 ~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~ 399 (434)
++.... + ..+ ++|+++||||.| |++|+|+||+++ ++++++.+......+ +++.++|.++..+++
T Consensus 175 -----~~~~~~---~-~~~--~~i~~~S~SK~~-g~~G~R~G~i~~---~~~~~~~l~~~~~~~-~~s~~~q~~~~~~l~ 238 (330)
T TIGR01140 175 -----SLAPQA---A-RFP--GLVVLRSLTKFF-GLAGLRLGFVVA---HPALLARLREALGPW-TVNGPARAAGRAALA 238 (330)
T ss_pred -----chhhHh---c-cCC--CEEEEEecchhh-cCchhhhhheeC---CHHHHHHHHhcCCCC-CchHHHHHHHHHHHh
Confidence 221211 1 112 489999999999 899999999987 888999988776543 567889999999998
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 400 PPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 400 ~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+..+.+..++.++++++.+.+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~l~~~L~~~~ 265 (330)
T TIGR01140 239 DTAWQAATRARLAAERARLAALLARLG 265 (330)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 776667778999999999999998764
No 107
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.97 E-value=1.3e-30 Score=248.78 Aligned_cols=258 Identities=22% Similarity=0.241 Sum_probs=216.8
Q ss_pred CCCCCCCcchHHHHHHHHHHHH-hhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCe
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIE-ARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT 238 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~-~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~ 238 (434)
..+|+++.|.++|+..+.++.. .++......-+|++|+|.+.++..+++.++ ++||.|+++.++|+...+.++..|++
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~-N~gd~vlie~~ty~~AL~s~~a~gv~ 171 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLI-NRGDHVLIEEYTYPSALQSMEALGVK 171 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhh-cCCCceEEecccchHHHHhccccCce
Confidence 6789999999999999999665 334444555689999999999999999999 89999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhc---CCCeeEEEEe-cCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 013892 239 LVPYYLDEATGWGLETSEVKKQLEAAKAK---GITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 239 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~---g~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
+++|+++++ ++++|.|++.+...+.+ .+++++++.+ +.+||||..++.+..++|+++|++|+++||+||.|..
T Consensus 172 ~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~ 248 (472)
T KOG0634|consen 172 IIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYF 248 (472)
T ss_pred EEeccccCC---CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccce
Confidence 999999877 99999999999875433 3567777776 7799999999999999999999999999999999999
Q ss_pred CccCC-------CCCccchHHH----HhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-c
Q 013892 315 NVYVP-------EKKFHSFKKV----SRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-V 382 (434)
Q Consensus 315 ~~~~~-------~~~~~s~~~~----~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~ 382 (434)
+.|+. +.+..+...+ .+.+-..+-+++||...||||.++ ||+|+||+++ ++.+++++..... .
T Consensus 249 Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia--PGlRlG~it~---~~~~l~ril~~ae~~ 323 (472)
T KOG0634|consen 249 LQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA--PGLRLGWITG---NSLFLKRILDLAEVA 323 (472)
T ss_pred eeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc--CcceeEEeec---CHHHHHHHhhhccee
Confidence 98883 2233331122 233333445779999999999994 9999999987 8888888888776 6
Q ss_pred ccCCchHHHHHHHHHcCCC------CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 383 NLCSNISGQILASLVMSPP------KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 383 ~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+..|+.+.|.++..+++.. +++.+.+..|..+|+.+..+|.+..
T Consensus 324 t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kyl 373 (472)
T KOG0634|consen 324 TSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYL 373 (472)
T ss_pred ecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6789999999999999863 5677889999999999999998764
No 108
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.96 E-value=1.6e-27 Score=234.96 Aligned_cols=249 Identities=29% Similarity=0.468 Sum_probs=204.8
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCe
Q 013892 159 ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT 238 (434)
Q Consensus 159 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~ 238 (434)
....|.+..|..++++.+++++...++.....+++++++|+++++..++..+. .+||+|+++.|+|.++...++..|.+
T Consensus 28 ~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~ 106 (350)
T cd00609 28 GLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL-NPGDEVLVPDPTYPGYEAAARLAGAE 106 (350)
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC-CCCCEEEEcCCCchhHHHHHHHCCCE
Confidence 36778999999999999999999988776778899999999999999999998 78999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccC
Q 013892 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (434)
Q Consensus 239 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 318 (434)
++.++.++...+..+.+.++....+ ++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+.
T Consensus 107 ~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~ 180 (350)
T cd00609 107 VVPVPLDEEGGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYD 180 (350)
T ss_pred EEEEecccccCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeC
Confidence 9999998665443332455544433 7999999999999999999999999999999999999999999998776
Q ss_pred CCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH-HHHHHHHHHhh-cccCCchHHHHHHHH
Q 013892 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-EVREQIYKVAS-VNLCSNISGQILASL 396 (434)
Q Consensus 319 ~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~-~~~~~l~~~~~-~~~~~~~~~q~~~~~ 396 (434)
+... . ...... ....+++++|++|.+ +.+|.|+||+++ ++ ++++.+..... .+.+++...+.++..
T Consensus 181 ~~~~--~---~~~~~~---~~~~~~~~~s~~K~~-~~~g~~~G~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (350)
T cd00609 181 GEPP--P---ALALLD---AYERVIVLRSFSKTF-GLPGLRIGYLIA---PPEELLERLKKLLPYTTSGPSTLSQAAAAA 248 (350)
T ss_pred Cccc--c---cccCcC---ccCcEEEEeeccccc-CCcccceEEEec---CHHHHHHHHHHHHHhcccCCChHHHHHHHH
Confidence 5421 1 001111 122468999999999 778999999986 66 78888877765 456889999999999
Q ss_pred HcCCC-CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 397 VMSPP-KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 397 ~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++... +..++.++.+.++++.+.+.|++..
T Consensus 249 ~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 279 (350)
T cd00609 249 ALDDGEEHLEELRERYRRRRDALLEALKELG 279 (350)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88875 4566777788888888888888754
No 109
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.96 E-value=6.4e-28 Score=220.97 Aligned_cols=314 Identities=17% Similarity=0.165 Sum_probs=238.3
Q ss_pred cccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHH
Q 013892 71 AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQ 150 (434)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~ 150 (434)
+...+++..-+.+.++ +....++|++|.......+|| +| | +++++..
T Consensus 12 a~p~~vf~~~~~y~~d--------~~p~KvnL~igAYRtd~g~PW--------------vL---------P--vVk~~e~ 58 (410)
T KOG1412|consen 12 APPIEVFKLNASYGED--------LDPVKVNLGIGAYRTDDGKPW--------------VL---------P--VVKKAEK 58 (410)
T ss_pred CChHHHHhhHHHhccc--------CCcceeecccceEEcCCCCee--------------Ee---------h--hhhhhhh
Confidence 3333444444445444 346789999999999888888 22 2 7777777
Q ss_pred HHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEE--EcCChHHHHHHHHHHHhc-CCCCEEEEcCCCChh
Q 013892 151 ILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIF--LTDGASPAVHMMMQLLIR-SENDGILCPIPQYPL 227 (434)
Q Consensus 151 ~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~--~t~G~~~al~~~l~~l~~-~~gd~Vlv~~p~y~~ 227 (434)
.+.+... ..+.|.|..|.+.++++.++.+-+.....+..++++ -+-+++.|+......|.. -....|++..|+|.+
T Consensus 59 ~i~~d~s-~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~n 137 (410)
T KOG1412|consen 59 KIANDQS-LNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWEN 137 (410)
T ss_pred hccCchh-ccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhH
Confidence 7766554 578999999999999999999966655556666642 334555565555444321 145689999999999
Q ss_pred HHHHHHHcC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC--CCCCccCCCHHHHHHHHHHHHHcCC
Q 013892 228 YSASIALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP--GNPTGQVLAEENQRAIVDFCKKEGL 304 (434)
Q Consensus 228 ~~~~~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p--~NPtG~~~~~~~l~~i~~~~~~~~~ 304 (434)
+..+++..| .++..|+.-+.++-.+|++.+...|+.+ ..+.|++.+. |||||...++|+|.+|++..+++++
T Consensus 138 H~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A-----Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~l 212 (410)
T KOG1412|consen 138 HHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESA-----PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNL 212 (410)
T ss_pred HHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhC-----CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCc
Confidence 999999999 5677788766667789999999999886 5566666633 9999999999999999999999999
Q ss_pred EEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH----HHh
Q 013892 305 VLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY----KVA 380 (434)
Q Consensus 305 ~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~----~~~ 380 (434)
+.+.|-+|++|..++.. .....++.+.+ ....+++++||+|+| |++|.|+|.+.++..++..+..+. .+.
T Consensus 213 f~fFDiAYQGfASGD~~---~DawAiR~fV~--~g~e~fv~QSFaKNf-GlYneRvGnltvv~~n~a~i~~v~SQl~lvi 286 (410)
T KOG1412|consen 213 FPFFDIAYQGFASGDLD---ADAWAIRYFVE--QGFELFVCQSFAKNF-GLYNERVGNLTVVVNNPAVIAGVKSQLTLVI 286 (410)
T ss_pred eeeeehhhcccccCCcc---ccHHHHHHHHh--cCCeEEEEhhhhhhc-ccccccccceEEEecChhHHHHHHHHHHHHH
Confidence 99999999998776642 11223333332 234689999999999 999999999988777777665554 333
Q ss_pred h-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 013892 381 S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKANIGRC 433 (434)
Q Consensus 381 ~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~ 433 (434)
. .+++|+..+..++..+|+.| +++++|....+.|..++.++...+.+.|
T Consensus 287 R~~~SNPPAyGArIV~kvL~tP----~lre~W~~sik~MssRI~~MR~aLrd~L 336 (410)
T KOG1412|consen 287 RSNWSNPPAYGARIVHKVLSTP----ELREQWIQSIKTMSSRIKKMRTALRDHL 336 (410)
T ss_pred hhccCCCcchhhHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 78899999999999999987 6788888888888888887777766543
No 110
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.96 E-value=1.5e-28 Score=227.95 Aligned_cols=319 Identities=17% Similarity=0.189 Sum_probs=243.6
Q ss_pred hhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHH
Q 013892 65 VLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADS 144 (434)
Q Consensus 65 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v 144 (434)
...++-+.-.+|....++++++ |..+.|||++|...+...||. + -++
T Consensus 28 ~s~V~maPpDpILGVTeAfk~D--------~n~~KiNLgvGaYRdd~gKp~--------------v-----------L~~ 74 (427)
T KOG1411|consen 28 WSHVEMAPPDPILGVTEAFKKD--------PNPKKINLGVGAYRDDNGKPY--------------V-----------LPS 74 (427)
T ss_pred hhcCCCCCCCCcccHHHHHhcC--------CCcceeeecccceecCCCCee--------------e-----------eHH
Confidence 4455555566788888888877 567999999999999777776 2 226
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHHHHhc-CCCCEEEEc
Q 013892 145 IERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMMQLLIR-SENDGILCP 221 (434)
Q Consensus 145 ~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~l~~l~~-~~gd~Vlv~ 221 (434)
++++.+.+.... ....|.|..|++++.+..++++.......+..++|+. |-++|.++......+.+ -++..|++|
T Consensus 75 VrkAE~ql~~~~--ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip 152 (427)
T KOG1411|consen 75 VRKAEQQLASLS--LDKEYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIP 152 (427)
T ss_pred HHHHHHHHhhhc--ccchhccccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeec
Confidence 666666555532 3679999999999999999999544332343445532 23445555544444321 378999999
Q ss_pred CCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC--CCCCccCCCHHHHHHHHHHH
Q 013892 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP--GNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 222 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p--~NPtG~~~~~~~l~~i~~~~ 299 (434)
.|+|.++..++...|+.+..|......+.++|++.+.+.+.++ ....++|.+. |||||+..+.++|++|.++.
T Consensus 153 ~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~-----p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~ 227 (427)
T KOG1411|consen 153 DPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEA-----PEGSIILLHACAHNPTGVDPTKEQWEKISDLI 227 (427)
T ss_pred CCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcC-----CCCcEEEeehhhcCCCCCCccHHHHHHHHHHh
Confidence 9999999999999999999888877778899999999888875 4556667644 99999999999999999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH--
Q 013892 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY-- 377 (434)
Q Consensus 300 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~-- 377 (434)
++.+.+.++|.+|++|..++.. .....++-+.+ +...+++++||+|++ |++|.|+|.+-+++.+++...++.
T Consensus 228 ~~k~~~pffDmAYQGfaSG~~d---~DA~avR~F~~--~g~~~~laQSyAKNM-GLYgERvGa~svvc~~ad~A~rV~SQ 301 (427)
T KOG1411|consen 228 KEKNLLPFFDMAYQGFASGDLD---KDAQAVRLFVE--DGHEILLAQSYAKNM-GLYGERVGALSVVCKDADEAKRVESQ 301 (427)
T ss_pred hhccccchhhhhhcccccCCch---hhHHHHHHHHH--cCCceEeehhhhhhc-chhhhccceeEEEecCHHHHHHHHHH
Confidence 9999999999999997766531 22222333332 234689999999999 999999999977777887666554
Q ss_pred --HHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 013892 378 --KVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKANIGRC 433 (434)
Q Consensus 378 --~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~ 433 (434)
.+.+ ++++||..+..++..+|+++ +++.+|..+.+.|.++|..+.+.+.+.+
T Consensus 302 lk~liRpmYSnPP~hGArIv~~Il~d~----~l~~~W~~evk~MadRi~~mR~~L~d~L 356 (427)
T KOG1411|consen 302 LKILIRPMYSNPPLHGARIVATILSDP----DLKNQWLGEVKGMADRIISMRQQLFDAL 356 (427)
T ss_pred HHHHhcccccCCCccchhhhhhccCCh----HHHHHHHHHHHHHHHhhhhhHHHHhHHh
Confidence 3344 89999999999999999997 6778888888888888887777766543
No 111
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.96 E-value=1.1e-27 Score=243.76 Aligned_cols=293 Identities=16% Similarity=0.175 Sum_probs=208.8
Q ss_pred hcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCc--ccCCCChhHHHHHHhhcCCCCcccccccCCCCCHH
Q 013892 66 LKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQ--SLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (434)
Q Consensus 66 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~--~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~ 143 (434)
+.+++.....+..++++++++ + .++|+|++|+|. +... ..+..
T Consensus 14 ~~v~~~~~~~~~~~~~~l~~~-----g----~~~~~L~~g~p~~D~~td--------------------------s~t~a 58 (460)
T PRK13238 14 KMVEPIRLTTREERERALAEA-----G----YNPFLLKSEDVFIDLLTD--------------------------SGTGA 58 (460)
T ss_pred ceeccccccCHHHHHHHHHHc-----C----CCEEeCCCCCCCCCCCCC--------------------------CCchh
Confidence 345556666778888888776 1 589999999994 4110 00114
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC
Q 013892 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIP 223 (434)
Q Consensus 144 v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p 223 (434)
+.+++.+++.. +...|++..|.++||+++++++. .+++++|+|+++++.+++.+++ ++|| |++++|
T Consensus 59 ~~~a~~~a~~~----g~~~Y~~~~g~~~Lreaia~~~~--------~~~vv~t~ggt~A~~~~~~all-~pGD-Vii~~p 124 (460)
T PRK13238 59 MSDRQWAAMMR----GDEAYAGSRSYYRLEDAVKDIFG--------YPYTIPTHQGRAAEQILFPVLI-KKGD-VVPSNY 124 (460)
T ss_pred hhHHHHHHHHh----CCcccCCCCCHHHHHHHHHHHhC--------CCcEEECCCHHHHHHHHHHHhC-CCCC-EEccCC
Confidence 66667777754 25689999999999999999983 3579999999999999999998 7999 999999
Q ss_pred CChhHHHHHHHcCCeEEEEecCCC------CCCC--CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc-cCCCHHHHHH
Q 013892 224 QYPLYSASIALHGGTLVPYYLDEA------TGWG--LETSEVKKQLEAAKAKGITVRALVVINPGNPTG-QVLAEENQRA 294 (434)
Q Consensus 224 ~y~~~~~~~~~~g~~~~~~~~~~~------~~~~--~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG-~~~~~~~l~~ 294 (434)
.|..|...++..|++++.+++++. ++|. +|+++|++.+++... .++++|++++|+|||| .+++.+++++
T Consensus 125 ~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~NptGG~v~s~~~l~~ 202 (460)
T PRK13238 125 HFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNNSAGGQPVSMANLRA 202 (460)
T ss_pred cccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCCCCCCcCCCHHHHHH
Confidence 999999999999999999998642 3555 999999999975211 2699999999999998 9999999999
Q ss_pred HHHHHHHcCCEEEEccCCC--CCccCCC----CCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee------EE
Q 013892 295 IVDFCKKEGLVLLADEVYQ--ENVYVPE----KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG------GY 362 (434)
Q Consensus 295 i~~~~~~~~~~li~Deay~--~~~~~~~----~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~------G~ 362 (434)
|.++|++||++||+|+++. ..+|... -...++..+. +.+.|++|.+ .++|+|+ ||
T Consensus 203 I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~------------~~~~s~~D~~-~~Sg~K~g~~~~GG~ 269 (460)
T PRK13238 203 VYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIA------------REMFSYADGL-TMSAKKDAMVNIGGL 269 (460)
T ss_pred HHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHh------------hhhcccCcEE-EEecccCCCCcceeE
Confidence 9999999999999999663 3444321 0123333332 2234555555 3555553 45
Q ss_pred EEEecCCHHHHHHHHHHh----h-cccCC-chHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 363 MEVTGFSAEVREQIYKVA----S-VNLCS-NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~----~-~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++. .++++++.+.... . .+.+. +...|.++...+.... -+...+...++++.+.+.|++.
T Consensus 270 i~~--~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~-~~~~~~~~~~~~~~l~~~L~~~ 335 (460)
T PRK13238 270 LCF--RDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGM-DEDYLAYRIGQVEYLGEGLEEA 335 (460)
T ss_pred EEc--ChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhh-ChHHHHHHHHHHHHHHHHHHHC
Confidence 543 2478888887763 2 23333 4454666665554310 0133444455688888888774
No 112
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=4.5e-27 Score=210.65 Aligned_cols=233 Identities=21% Similarity=0.393 Sum_probs=191.6
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCeE
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTL 239 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~ 239 (434)
..|+..+ ...++.++++- -+.++|+|+++.|+.+.|..+++..| .|| ++|+...|+|..|.-.+...++++
T Consensus 64 ~~~~d~r-nk~ls~a~~~d------kpLt~dnic~GvGsDE~ID~iiR~~c-~PGkeKIl~cPPtysMY~v~A~iNd~eV 135 (375)
T KOG0633|consen 64 YVYPDPR-NKRLSDALAQD------KPLTSDNICVGVGSDELIDLIIRCVC-DPGKEKILDCPPTYSMYVVDAAINDAEV 135 (375)
T ss_pred cccCCcc-cchhhhhcccC------CCCCccceEEecCcHHHHHHHHhhee-cCCccceeecCCcceeEEEEeecCCceE
Confidence 3455554 44555555442 36889999999999999999999999 788 999999999999998888999999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 013892 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (434)
Q Consensus 240 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~ 319 (434)
+.+|+.. +|.+|+|++.+.++.. ..+|++++++|+||||..+..+++++|.+.-. |.+|++||+|.+ |.+
T Consensus 136 vkvpl~p--dF~lnvdai~evl~~d----s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYid--Fsg 205 (375)
T KOG0633|consen 136 VKVPLNP--DFSLNVDAIAEVLELD----SKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYID--FSG 205 (375)
T ss_pred EEecCCC--CccccHHHHHHHHhcc----ccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEe--ecc
Confidence 9999986 5899999999988652 26899999999999999999999998887443 789999999999 554
Q ss_pred CCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcC
Q 013892 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMS 399 (434)
Q Consensus 320 ~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~ 399 (434)
.. |-..+.. .|+| ++++++|||.| |++|+|+||-.. +..+++.+......+ +.+..+..++..+++
T Consensus 206 ~~---S~~~lV~----kYpN--LivlqTlSKsf-GLAGiRvG~~~~---~~~ia~iln~~KaPY-NiS~~~s~~AL~Als 271 (375)
T KOG0633|consen 206 VE---SRMKLVK----KYPN--LIVLQTLSKSF-GLAGIRVGYGAF---PLSIAEILNRAKAPY-NISVAGSVAALAALS 271 (375)
T ss_pred cc---ccchHhH----hCCc--eeehhhhhhhc-CcceeEeecccc---cHHHHHHHHhccCCc-cccchhHHHHHHhcC
Confidence 21 2122333 5677 89999999999 999999999876 889988888777655 778888888888888
Q ss_pred C--CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 400 P--PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 400 ~--~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+ .+..+..++.+.++|.++...|.+.
T Consensus 272 ~~n~kkme~~rdaiv~er~RL~keLt~v 299 (375)
T KOG0633|consen 272 DSNGKKMEDVRDAIVRERERLFKELTEV 299 (375)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhhcC
Confidence 5 4667888999999999999888764
No 113
>PRK07049 methionine gamma-lyase; Validated
Probab=99.94 E-value=9.4e-25 Score=220.82 Aligned_cols=228 Identities=17% Similarity=0.165 Sum_probs=179.4
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHc
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALH 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~ 235 (434)
...|+.+. ...|++.+|++. | .+++++++|+++++..++.+++ ++||.|+++.|+|+.+...+ +..
T Consensus 77 y~R~~~Pt-~~~Le~~lA~le----g----~~~~iv~~sG~~Ai~~~l~al~-~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~ 146 (427)
T PRK07049 77 YSRFNHPN-SEIVEDRLAVYE----G----AESAALFSSGMSAIATTLLAFV-RPGDVILHSQPLYGGTETLLAKTFRNF 146 (427)
T ss_pred ccCCCCcC-HHHHHHHHHHHh----C----CCcEEEEccHHHHHHHHHHHHh-CCCCEEEEcCCCcccHHHHHHHHHHhc
Confidence 35566555 688999999986 2 4578888999999999999998 79999999999999997664 457
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH---cCCEEEEccCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK---EGLVLLADEVY 312 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~---~~~~li~Deay 312 (434)
|++++.++. ..|.+.+++++++...+ .++++|++++|+||||.+++.+++.+|++.|++ +++++|+||+|
T Consensus 147 Gi~~v~~~~------~~d~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety 219 (427)
T PRK07049 147 GVGAVGFAD------GLSEAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTL 219 (427)
T ss_pred CcEEEEEeC------CCCHHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCc
Confidence 998877762 35778888887643221 268999999999999999998888888888654 68999999998
Q ss_pred CCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHH
Q 013892 313 QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQ 391 (434)
Q Consensus 313 ~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q 391 (434)
....+.. + + ..+ . .|+++||||.|+|++|+|+||++. ++++++.+.+.+. ...+.+++.|
T Consensus 220 ~~~~~~~--p---l-----~~g---~---divv~S~SK~~gG~~glr~G~vv~---~~~l~~~l~~~~~~~g~~ls~~~a 280 (427)
T PRK07049 220 LGPVFQK--P---L-----EHG---A---DLSVYSLTKYVGGHSDLVAGAVLG---RKALIRQVRALRSAIGTQLDPHSC 280 (427)
T ss_pred cccccCC--c---c-----ccC---C---CEEEEcCceeecCCCCcEEEEEEC---CHHHHHHHHHHHHhcCCCCCHHHH
Confidence 7643321 1 1 111 2 388999999996689999999976 8899999988776 4567888888
Q ss_pred HHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 392 ILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 392 ~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+++...++ .+....+++.++++.+.+.|+++.
T Consensus 281 ~l~~r~L~---tl~~R~~~~~~~a~~la~~L~~~p 312 (427)
T PRK07049 281 WMLGRSLE---TLVLRMERANRNARAVAEFLRDHP 312 (427)
T ss_pred HHHHcCCC---hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 88777774 456777888999999999998764
No 114
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.94 E-value=4.1e-24 Score=215.11 Aligned_cols=261 Identities=17% Similarity=0.146 Sum_probs=188.6
Q ss_pred Cccccccc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCc---ch----HHHHHHHHHHHHhhcCCCCCCCCEEEcCC
Q 013892 129 SILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQ---GI----KGLRDTIAAGIEARDGFPADPNDIFLTDG 198 (434)
Q Consensus 129 ~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~---G~----~~lr~~ia~~~~~~~g~~~~~~~i~~t~G 198 (434)
++++|+.+ +...++++++++.+.+.+.+ .+|+++. |. .++++++|+++ | .+++++++|
T Consensus 39 ~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~----~~~~~s~~~~G~~~~~~~le~~ia~~~----g----~~~~ii~~~ 106 (393)
T TIGR01822 39 EVLNFCANNYLGLSSHPDLIQAAKDALDEHG----FGMSSVRFICGTQDIHKELEAKIAAFL----G----TEDTILYAS 106 (393)
T ss_pred eEEEeeCCCccccCCCHHHHHHHHHHHHHhC----CCCCCcCcccCChHHHHHHHHHHHHHh----C----CCcEEEECc
Confidence 34555555 23457889999999887632 2455555 75 77888888887 3 246788888
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEec
Q 013892 199 ASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN 278 (434)
Q Consensus 199 ~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~ 278 (434)
+++++..++.+++ ++||.|+++.|+|+.+...++..+.+.+.+. .+|+++|++++++....+.++++|++.+
T Consensus 107 ~~~a~~~~~~~l~-~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~~ 178 (393)
T TIGR01822 107 CFDANGGLFETLL-GAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIATDG 178 (393)
T ss_pred hHHHHHHHHHHhC-CCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEeC
Confidence 9999999999998 7999999999999999999988888776543 4689999999986533334678888889
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCc
Q 013892 279 PGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (434)
Q Consensus 279 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~ 358 (434)
++||||.+.+ +++|+++|++||+++|+||+|....++.. ..+.... ..+. ++ ..+++.|+||.+ +|+
T Consensus 179 v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~--~~~~~~~-~~~~---~~-~di~~~s~sK~l---~g~ 245 (393)
T TIGR01822 179 VFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPT--GRGSHEL-CGVM---GR-VDIITGTLGKAL---GGA 245 (393)
T ss_pred CccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCC--CCchHHh-cCCC---CC-CeEEEEEChHHh---hCC
Confidence 9999999988 89999999999999999999964433322 1111111 1111 22 348899999987 378
Q ss_pred eeEEEEEecCCHHHHHHHHHHhh--cccC-CchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 359 RGGYMEVTGFSAEVREQIYKVAS--VNLC-SNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 359 R~G~~~~~~~~~~~~~~l~~~~~--~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
|+||+++ ++++++.+..... ...+ .+...+.++...++..+..++.+++++++++.+.+.|++.
T Consensus 246 r~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (393)
T TIGR01822 246 SGGFTTA---RKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA 312 (393)
T ss_pred CcEEEEe---CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999976 8999998876432 2222 2333334444444332335677889999999999988764
No 115
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.94 E-value=2.7e-24 Score=216.47 Aligned_cols=257 Identities=14% Similarity=0.108 Sum_probs=185.9
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEE
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vl 219 (434)
.++.+++++.+.+..... ....|....|..++++++++++.+.+|. +++|++|+| ++++..+++.++ ++||.|+
T Consensus 57 ~~~~i~~a~~~~~~~~~~-~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~~a~~~~~~~l~-~~gd~vi 130 (397)
T PRK06939 57 NHPELIAAAKAALDSHGF-GMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-FDANGGLFETLL-GKEDAII 130 (397)
T ss_pred CCHHHHHHHHHHHHHcCC-CCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-HHHHHHHHHHhC-CCCCEEE
Confidence 578889988888876321 1234445678999999999999988773 367888888 678888888888 7999999
Q ss_pred EcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHH
Q 013892 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 220 v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~ 299 (434)
+++|+|+.+...++..|++++.++. .|++++++.+++....+.++++|++.+.+||||...+ +++|.++|
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~---~~~l~~la 200 (397)
T PRK06939 131 SDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP---LPEICDLA 200 (397)
T ss_pred EEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC---HHHHHHHH
Confidence 9999999999999999999887753 4789999888764333336777777778999998665 89999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH
Q 013892 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (434)
Q Consensus 300 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 379 (434)
+++|++||+||+|....+.... ...... ..+. ++ ..|+++||||.| + |+|+||+++ ++++++.+...
T Consensus 201 ~~~~~~li~De~~~~g~~~~~~--~~~~~~-~~~~---~~-~~i~~~S~sK~~-~--g~r~G~v~~---~~~~~~~l~~~ 267 (397)
T PRK06939 201 DKYDALVMVDDSHAVGFVGENG--RGTVEH-FGVM---DR-VDIITGTLGKAL-G--GASGGYTAG---RKEVIDWLRQR 267 (397)
T ss_pred HHhCCEEEEECcccccCcCCCC--CCHHHH-cCCC---CC-CcEEEEECHHHh-C--ccCceEEEe---CHHHHHHHHHh
Confidence 9999999999999643233211 111111 1111 22 248999999998 3 679999987 88999988765
Q ss_pred hh--cccCC-chHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 380 AS--VNLCS-NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 380 ~~--~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.. ...++ +...+.++...++..+..++.+++++++++.+.+.|++.
T Consensus 268 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 316 (397)
T PRK06939 268 SRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA 316 (397)
T ss_pred CccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 33 12222 333344333333322234578889999999999999875
No 116
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.94 E-value=1.5e-24 Score=218.11 Aligned_cols=281 Identities=14% Similarity=0.193 Sum_probs=197.0
Q ss_pred HHHHHHHHHhcCCCCCCcccceeccCCCC--cccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCC
Q 013892 79 IAQRLQQELQTNPGSHSFDEILYCNIGNP--QSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIP 156 (434)
Q Consensus 79 ~a~~~~~~~~~~~~~~p~~~vi~~~iG~p--~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~ 156 (434)
|+++++++ + .+++.|..|+| +.+.. .+ ...+.+++..++...
T Consensus 2 r~~~l~~~-----g----~n~~~l~~~~v~iDlltd-------------------------s~-t~ams~~~~~a~~~g- 45 (431)
T cd00617 2 RERALKEA-----G----YNVFLLRSEDVYIDLLTD-------------------------SG-TGAMSDYQWAAMMLG- 45 (431)
T ss_pred hHHHHHHc-----C----CCEEeCCCCCcCCCCCCC-------------------------CC-cHHHHHHHHHHHHhC-
Confidence 45566655 1 68999999999 44110 00 123455556666542
Q ss_pred CCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcC
Q 013892 157 GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG 236 (434)
Q Consensus 157 ~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g 236 (434)
...|+++.|.++|++++++++. .+++++|+|+++|+.+++.+++ +|||.| +++|.|..+...+...|
T Consensus 46 ---d~~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~Gt~Al~la~~al~-~pGD~V-~~~~~f~~~~~~i~~~G 112 (431)
T cd00617 46 ---DEAYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQGRGAENILFSILL-KPGRTV-PSNMHFDTTRGHIEANG 112 (431)
T ss_pred ---CCccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCHHHHHHHHHHHhC-CCCCEE-ccCCcccchHHHHHhCC
Confidence 4569999999999999999982 3579999999999999999998 799988 69999999999999999
Q ss_pred CeEEEEecCCCCC------C--CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC-ccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 237 GTLVPYYLDEATG------W--GLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 237 ~~~~~~~~~~~~~------~--~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li 307 (434)
++++.++++++.+ | .+|++.|+++|++.. ..++++|++++|+||+ |.+++.+++++|.++|++||++||
T Consensus 113 a~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~--~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li 190 (431)
T cd00617 113 AVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVG--AENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVV 190 (431)
T ss_pred CEeEEEecccccccccccCCCCCcCHHHHHHHhCccc--CCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 9999999976533 4 499999999997520 0147899999999998 999999999999999999999999
Q ss_pred EccCCCC--CccC----CCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce------eEEEEEecCCHHHHHH
Q 013892 308 ADEVYQE--NVYV----PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR------GGYMEVTGFSAEVREQ 375 (434)
Q Consensus 308 ~Deay~~--~~~~----~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R------~G~~~~~~~~~~~~~~ 375 (434)
.|++... ..|. +.....++..+. +.+.|+||.+ .++|+| +||++. .+++++++
T Consensus 191 ~DaAr~~~na~~i~~r~~g~~~~si~ei~------------~e~~s~sd~~-~mS~~K~~~~~~GG~i~~--~d~~l~~~ 255 (431)
T cd00617 191 LDAARFAENAYFIKEREEGYRDKSIAEIA------------REMFSYADGC-TMSAKKDGLVNIGGFLAL--RDDELYEE 255 (431)
T ss_pred EEchhhHhhhhhhhcccccccCCCHHHHH------------HHhhccCCEE-EEEeecCCCCccceEEEe--CcHHHHHH
Confidence 9999432 1221 111123343332 3456777777 577777 778875 34578888
Q ss_pred HHHHhh-----c-ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 376 IYKVAS-----V-NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 376 l~~~~~-----~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+..... . +...+.....++...|+.... .+..+...++|+.+.+.|++.+
T Consensus 256 ~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~-~~~l~~~~~~r~~l~~~L~~~G 311 (431)
T cd00617 256 ARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE-EDYLRHRVEQVRYLGDRLDEAG 311 (431)
T ss_pred HHHhccccCCccccccccHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHCC
Confidence 775321 1 111222222333334543211 2334444556688888888764
No 117
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=9.2e-25 Score=199.50 Aligned_cols=292 Identities=22% Similarity=0.318 Sum_probs=208.2
Q ss_pred hHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcC
Q 013892 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (434)
Q Consensus 76 ~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~ 155 (434)
|.+.++++...|+. +..|.|+.|||...... .++|++.++ +.+.+.
T Consensus 16 i~~lMdDl~d~Lrt-------~g~imLggGNPa~iPem-~~~f~~~~a--------------------------emla~~ 61 (417)
T COG3977 16 ITQLMDDLNDGLRT-------PGAIMLGGGNPARIPEM-DDYFQDLLA--------------------------EMLASG 61 (417)
T ss_pred HHHHHHHHHhhccC-------CCceeeCCCCcccChhH-HHHHHHHHH--------------------------HHHhcc
Confidence 45566666665533 45999999999973220 122222221 112111
Q ss_pred -CCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc--CCC--CEEEEc-CCCChhHH
Q 013892 156 -PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--SEN--DGILCP-IPQYPLYS 229 (434)
Q Consensus 156 -~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~--~~g--d~Vlv~-~p~y~~~~ 229 (434)
.......|..++|...|.+++++.+++++|+++++++|.+|+|++.+.+.++..|.. ..| .+|+.| .|.|-+|.
T Consensus 62 ~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~ 141 (417)
T COG3977 62 KATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYA 141 (417)
T ss_pred hHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcccc
Confidence 001356799999999999999999999999999999999999999999999988841 123 346655 58888887
Q ss_pred HHHHHcCCeEEEE----ecCCCC--CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC
Q 013892 230 ASIALHGGTLVPY----YLDEAT--GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (434)
Q Consensus 230 ~~~~~~g~~~~~~----~~~~~~--~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~ 303 (434)
++.-.-.. .+.+ .+.+.+ .|.+|++.|.- .+ .+.+|+++.|.||||.+++.+|+.+|-++|++||
T Consensus 142 d~~l~~d~-fVs~kP~iel~~~g~FKY~vDF~~l~i--~e------~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~g 212 (417)
T COG3977 142 DAGLEEDL-FVSAKPNIELLPAGQFKYHVDFEHLHI--GE------STGAICVSRPTNPTGNVLTDEELAKLDALARQHG 212 (417)
T ss_pred ccccCccc-eeeccCCcccccccceeeccCHHHccc--cc------ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcC
Confidence 64322111 2222 122222 46778887753 23 6889999999999999999999999999999999
Q ss_pred CEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-c
Q 013892 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-V 382 (434)
Q Consensus 304 ~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~ 382 (434)
+.+|+|.+|+- ||+.+-- .++.....+ ++|.|.|+|| + |+||.|+|.+++ ++++++.+..+.. .
T Consensus 213 iPliIDnAYg~-------PFP~iif--sd~~~~w~~-NiilC~SLSK-~-GLPG~R~GIiIa---ne~viqaitnmn~ii 277 (417)
T COG3977 213 IPLIIDNAYGV-------PFPGIIF--SDATPLWNE-NIILCMSLSK-L-GLPGSRCGIIIA---NEKVIQAITNMNGII 277 (417)
T ss_pred CcEEEecccCC-------CCCceec--ccccccCCC-CEEEEeehhh-c-CCCCcceeEEEc---cHHHHHHHHhcccee
Confidence 99999999985 2332210 111111112 4899999999 4 999999999988 9999999999887 7
Q ss_pred ccCCchHHHHHHHHHcCCCCCC---h-HHHHHHHHHHHHHHHHHHHH
Q 013892 383 NLCSNISGQILASLVMSPPKVG---D-ESYESYCAERDGILSSLARR 425 (434)
Q Consensus 383 ~~~~~~~~q~~~~~~l~~~~~~---~-~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+.|...+++++..+++..+-+ + -.+..|+.+.+...+.|++.
T Consensus 278 sLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~ 324 (417)
T COG3977 278 SLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRY 324 (417)
T ss_pred eecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 7899999999999999875321 1 23456777777777777654
No 118
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.93 E-value=1.6e-23 Score=207.90 Aligned_cols=251 Identities=16% Similarity=0.136 Sum_probs=178.0
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcc----hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G----~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g 215 (434)
.|+++++++.+.+.+.+. ....|....| ..++++++++++ + .+++|++++|+.+.+ .++..++ ++|
T Consensus 31 ~~~~v~~a~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~----~---~~~~i~~~~G~~~~~-~~l~~~~-~~g 100 (360)
T TIGR00858 31 SHPEVIQAAQQGAEQYGA-GSTASRLVSGNSPLHEELEEELAEWK----G---TEAALLFSSGYLANV-GVISALV-GKG 100 (360)
T ss_pred CCHHHHHHHHHHHHhcCC-CCCCcCcccCCcHHHHHHHHHHHHHh----C---CCCEEEECchHHHHH-HHHHHhC-CCC
Confidence 468899999888876332 1223333333 445777777765 3 356788888865554 5667777 799
Q ss_pred CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHH
Q 013892 216 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (434)
Q Consensus 216 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i 295 (434)
|.|+++.|+|+.+...++..|++++.++ .+|++.|++.++... +.++++|++.+++||||...+ +++|
T Consensus 101 d~v~~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~---~~~i 168 (360)
T TIGR00858 101 DLILSDALNHASLIDGCRLSGARVRRYR-------HNDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAP---LPQL 168 (360)
T ss_pred CEEEEEccccHHHHHHHHhcCCceEEec-------CCCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcC---HHHH
Confidence 9999999999999999999999988876 358899999887521 114678888899999999888 8899
Q ss_pred HHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHH
Q 013892 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (434)
Q Consensus 296 ~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 375 (434)
.++|+++|+++|+||+|..+.++.. ..+.... ..+. ++.++|+++||||.| |++| ||+++ ++++++.
T Consensus 169 ~~l~~~~~~~li~De~~~~~~~~~~--~~~~~~~-~~~~---~~~~~i~i~s~sK~~-~~~g---G~~~~---~~~~~~~ 235 (360)
T TIGR00858 169 VALAERYGAWLMVDDAHGTGVLGED--GRGTLEH-FGLK---PEPVDIQVGTLSKAL-GSYG---AYVAG---SQALIDY 235 (360)
T ss_pred HHHHHHcCcEEEEECcccccCcCCC--CCchHHh-cCCC---ccCCcEEEEechhhh-hccC---cEEEc---CHHHHHH
Confidence 9999999999999999987666543 1122111 1111 222478999999999 5555 99976 8888888
Q ss_pred HHHHhhc---ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 376 IYKVASV---NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 376 l~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+...... ....+...+.++...++..+..++.++++.++++.+.+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 288 (360)
T TIGR00858 236 LINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL 288 (360)
T ss_pred HHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 8654331 2234455454555555533344677899999999999999875
No 119
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.93 E-value=1.6e-23 Score=210.22 Aligned_cols=255 Identities=15% Similarity=0.109 Sum_probs=187.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
..++.+++++.+.+.+... ....|....|..++++++++++.+.+|. ++.+++++|+ +++..++..++ ++||.|
T Consensus 47 ~~~~~~~~a~~~~~~~~~~-~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG~-~a~~~a~~~~~-~~gd~v 120 (385)
T TIGR01825 47 ADHPRLKEAAAQAIQQYGV-GAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSGF-NTNQGVLSALL-RKGDIV 120 (385)
T ss_pred CCCHHHHHHHHHHHHHcCC-CCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcHH-HHHHHHHHHhC-CCCCEE
Confidence 3577888888888875432 2457888899999999999999988772 4578888885 56667777887 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|+.+...+...|++++.++ .+|++++++.+++... .++++|++++++||||.+.+ +++|.++
T Consensus 121 i~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~---~~~i~~l 188 (385)
T TIGR01825 121 LSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAP---LPEIVEL 188 (385)
T ss_pred EEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccC---HHHHHHH
Confidence 9999999999888888888887653 5688899888875321 25778888888999999988 8899999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
|++||+++|+||+|..+.++... .... ... .+. ++ .++++.||||.| |++ +||++. ++++++.+..
T Consensus 189 ~~~~~~~li~De~~~~~~~~~~~-~~~~-~~~-~~~---~~-~~i~~~s~sK~~-~~~---gG~~~~---~~~~~~~~~~ 254 (385)
T TIGR01825 189 AERYGAVTYVDDAHGSGVMGEAG-RGTV-HHF-GLE---DK-VDIQVGTLSKAI-GVV---GGYAAG---HKELIEYLKN 254 (385)
T ss_pred HHHhCCEEEEECcccccCcCCCC-CccH-hhc-CCC---cC-CcEEEEeccHHh-hcC---CCEEec---CHHHHHHHHH
Confidence 99999999999999887665321 1111 111 111 23 468999999998 544 499976 8889988876
Q ss_pred Hhh--ccc-CCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VAS--VNL-CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 379 ~~~--~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
... ... ..++..+.++...++......+..+++.++++.+.+.|++.
T Consensus 255 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 304 (385)
T TIGR01825 255 RARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL 304 (385)
T ss_pred hCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 543 222 34556666666655432222356777788888888888764
No 120
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=1.2e-23 Score=207.08 Aligned_cols=256 Identities=13% Similarity=0.061 Sum_probs=185.2
Q ss_pred cCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC
Q 013892 136 TQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (434)
Q Consensus 136 ~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g 215 (434)
++.++|+.+++++.+.+.. ...|.+..+..++++.+++++ | ++++++++|+++++..++..++ ++|
T Consensus 6 ~~~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~~a~~~----g----~~~~~~~~~gt~a~~~~~~~l~-~~g 71 (338)
T cd06502 6 TVTGPTPEMLEAMAAANVG-----DDVYGEDPTTAKLEARAAELF----G----KEAALFVPSGTAANQLALAAHT-QPG 71 (338)
T ss_pred cCCCCCHHHHHHHHhcccC-----CcccCCCHHHHHHHHHHHHHh----C----CCeEEEecCchHHHHHHHHHhc-CCC
Confidence 3667899999988775532 235766667788888888876 3 4578888888899999999988 799
Q ss_pred CEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc-CCCeeEEEEecCCCCCccCCCHHH
Q 013892 216 DGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK-GITVRALVVINPGNPTGQVLAEEN 291 (434)
Q Consensus 216 d~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-g~~~~~i~l~~p~NPtG~~~~~~~ 291 (434)
|+|+++.|+|..+.. .....|++++.++.+. +.+|+++|++++++..+. ..++++|+++||+|| |.+++.++
T Consensus 72 d~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~ 147 (338)
T cd06502 72 GSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDE 147 (338)
T ss_pred CeEEEecCcceeeecCCcHHHHcCceEEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHH
Confidence 999999999976442 3455899999998743 579999999998742111 125889999999997 67779999
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~ 371 (434)
+++|+++|+++|+++|+||+|..+.....+ .++.... ...+ +++.|+||.| |++| +++++. +++
T Consensus 148 l~~i~~~~~~~~~~livDea~~~~~~~~~~--~~~~~~~-----~~~d---~~~~s~sK~~-~~~~--g~~~~~---~~~ 211 (338)
T cd06502 148 LKAISALAKENGLPLHLDGARLANAAAALG--VALKTYK-----SGVD---SVSFCLSKGG-GAPV--GAVVVG---NRD 211 (338)
T ss_pred HHHHHHHHHHcCCeEeechHHHHHHHHhcC--CCHHHHH-----hcCC---EEEEeccccC-CCcc--ceEEEC---CHH
Confidence 999999999999999999998653221111 1222111 1133 4577999999 6776 333433 888
Q ss_pred HHHHHHHHhhc---ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 372 VREQIYKVASV---NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 372 ~~~~l~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+++.+...... ....+.+.+.++...|+...+ .+..+++.++++.+.+.|+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~-~~~~~~~~~~~~~l~~~L~~~~ 268 (338)
T cd06502 212 FIARARRRRKQAGGGMRQSGFLAAAGLAALENDLW-LRRLRHDHEMARRLAEALEELG 268 (338)
T ss_pred HHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 99998776532 224566777777777765432 3556788888888988888753
No 121
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.92 E-value=2.6e-22 Score=197.89 Aligned_cols=234 Identities=17% Similarity=0.163 Sum_probs=171.9
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEE
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vl 219 (434)
-.+.+++++.+.++..+ |..++.+.+.+.+.+.+| ++++++++++|+.+++..++.+++ ++||.|+
T Consensus 34 ~~~~~~~~~~~~~~~~~-----------g~~~~~~~Le~~lA~~~g--~~~e~ilv~~gg~~a~~~~~~al~-~~gd~Vl 99 (346)
T TIGR03576 34 GGFKIDEEDLELLETYV-----------GPAIFEEKVQELGREHLG--GPEEKILVFNRTSSAILATILALE-PPGRKVV 99 (346)
T ss_pred CChhHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHHcC--CCcceEEEECCHHHHHHHHHHHhC-CCCCEEE
Confidence 35668888888887631 334455555555544455 467899999999999999999998 7999999
Q ss_pred Ec---CCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHH
Q 013892 220 CP---IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (434)
Q Consensus 220 v~---~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 296 (434)
++ .|+|+.|...++..|++++.+ .++++++. . + ++++|++ +++||+|.+++.+++++|+
T Consensus 100 i~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~-~------~~~lIii-tg~s~~G~v~~~~~L~~i~ 161 (346)
T TIGR03576 100 HYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK-I-D------GTSLVVI-TGSTMDLKVVSEEDLKRVI 161 (346)
T ss_pred ECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C-c------CceEEEE-ECCCCCCcccCHHHHHHHH
Confidence 75 479999999999999986432 14454321 1 1 5677777 4579999999999999999
Q ss_pred HHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHH
Q 013892 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (434)
Q Consensus 297 ~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 376 (434)
++|+++|+++|+||+|..++.+... ..+.. .++ .| |++.||||++ +|+|+||+++ ++++++.+
T Consensus 162 ~la~~~~~~livDEAy~~~~~~~~~-~~~~~----~~~---~d---ivv~s~SKal---aG~r~G~v~~---~~~li~~l 224 (346)
T TIGR03576 162 KQAKSKEAIVLVDDASGARVRRLYG-QPPAL----DLG---AD---LVVTSTDKLM---DGPRGGLLAG---RKELVDKI 224 (346)
T ss_pred HHHHHcCCEEEEECCccccccccCC-CCCHH----HcC---Cc---EEEeccchhc---cccceEEEEe---CHHHHHHH
Confidence 9999999999999999987643211 11111 111 23 6677999954 7999999987 89999999
Q ss_pred HHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHH
Q 013892 377 YKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 377 ~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
.+... ...+++++.|.++..+|+... .+..++.++++++.+.+.++
T Consensus 225 ~~~~~~~~~s~~~~~~~aa~~aL~~~~-~~~~~~~l~~r~~~~~~~l~ 271 (346)
T TIGR03576 225 KSVGEQFGLEAQAPLLAAVVRALEEFE-LSRIRDAFKRKEEVYLRLFD 271 (346)
T ss_pred HHhhcCcccCccHHHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHH
Confidence 98876 334567888998888886532 24556777777777777665
No 122
>PLN02242 methionine gamma-lyase
Probab=99.91 E-value=4.6e-23 Score=207.85 Aligned_cols=212 Identities=16% Similarity=0.153 Sum_probs=167.1
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH-----HHcCCeEEEEe
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI-----ALHGGTLVPYY 243 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~-----~~~g~~~~~~~ 243 (434)
..+|++.+|++. | .+.+++++|+++++..++.+++ ++||.|+++.|.|+.+...+ +..|++++.++
T Consensus 78 ~~~LE~~lA~l~----g----~~~~l~~~sG~~Ai~~al~al~-~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d 148 (418)
T PLN02242 78 VLNLGRQMAALE----G----TEAAYCTASGMSAISSVLLQLC-SSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVD 148 (418)
T ss_pred HHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHh-CCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence 678888888876 2 3567899999999999999998 79999999999999887765 34687777665
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCc
Q 013892 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF 323 (434)
Q Consensus 244 ~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 323 (434)
. .|++.+++++++. ++++|++++|+||||.+.+ +++|+++|+++|++||+|++|..+.+...
T Consensus 149 ~-------~d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~~--- 210 (418)
T PLN02242 149 I-------TDLEAVKKAVVPG-----KTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSPA--- 210 (418)
T ss_pred C-------CCHHHHHHhcCcC-----CCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCHH---
Confidence 3 2789999988651 4899999999999999987 89999999999999999999987554211
Q ss_pred cchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce-eEEEEEecCCHHHHHHHHHHhh---cccCCchHHHHHHHHHcC
Q 013892 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSAEVREQIYKVAS---VNLCSNISGQILASLVMS 399 (434)
Q Consensus 324 ~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R-~G~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~q~~~~~~l~ 399 (434)
.++ . .|+++||||.| +.+|++ +||+++ ++++++.+...+. ...+++...|.++..+..
T Consensus 211 --------~~g---~---divv~S~SK~l-~g~g~~~gG~iv~---~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~ 272 (418)
T PLN02242 211 --------RLG---A---DVVVHSISKFI-SGGADIIAGAVCG---PAELVNSMMDLHHGALMLLGPTMNPKVAFELSER 272 (418)
T ss_pred --------HcC---C---cEEEEeCcccc-CCCCCceEEEEEc---CHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC
Confidence 111 2 38899999999 568877 699876 8899988876643 234556666666665554
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 400 PPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 400 ~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.+.+...++++.++++.+.+.|+++.
T Consensus 273 -l~tl~~r~~~~~~~a~~la~~L~~~~ 298 (418)
T PLN02242 273 -LPHLSLRMKEHCRRAMEYAKRMKELG 298 (418)
T ss_pred -CCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 34666778899999999999999863
No 123
>PLN02822 serine palmitoyltransferase
Probab=99.91 E-value=2.6e-22 Score=206.09 Aligned_cols=267 Identities=15% Similarity=0.094 Sum_probs=195.8
Q ss_pred CCCccccccc---CCCCCHHHHHHHHHHHHcCCCC---CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 127 HPSILDRSET---QGLFSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 127 ~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
...++||+.+ ....++++++++.+.+++.+.. ..+.|++..+..+|++++++++ + .++.|++++|.+
T Consensus 108 G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~----~---~~~~i~~s~G~~ 180 (481)
T PLN02822 108 GKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFL----G---TPDSILYSYGLS 180 (481)
T ss_pred CceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHh----C---CCCEEEECCHHH
Confidence 3456677665 3346889999999999885321 1235778888999999999998 2 457899999887
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc---CCCe-eEEEE
Q 013892 201 PAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK---GITV-RALVV 276 (434)
Q Consensus 201 ~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~---g~~~-~~i~l 276 (434)
++..++.+++ ++||.|++....|..+...+...|.+++.++.+ |.+.++..+++.++. ..++ ++|++
T Consensus 181 -a~~sai~a~~-~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivv 251 (481)
T PLN02822 181 -TIFSVIPAFC-KKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVV 251 (481)
T ss_pred -HHHHHHHHhC-CCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEE
Confidence 5677888888 799999999888888888888999999998765 456666666543322 1234 68888
Q ss_pred ecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCC
Q 013892 277 INPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC 356 (434)
Q Consensus 277 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~ 356 (434)
+.++|+||.+.+ +++|+++|++||+++|+||+|...+++..+. ..... ..+.. .+ ..|++.||||+| |++
T Consensus 252 e~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~--G~~e~-~~v~~--~~-~dii~~s~sKal-g~~ 321 (481)
T PLN02822 252 EAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGR--GLSEH-FGVPI--EK-IDIITAAMGHAL-ATE 321 (481)
T ss_pred ecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCC--ChHHH-cCCCC--CC-CeEEEecchhhh-hhC
Confidence 888999999999 8999999999999999999999877764321 11111 11110 12 248899999999 677
Q ss_pred CceeEEEEEecCCHHHHHHHHHHhh-cccC--CchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 357 GKRGGYMEVTGFSAEVREQIYKVAS-VNLC--SNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 357 G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
| ||+++ ++++++.+..... ...+ .++..+.++...|+..+...+.+++++++++.+.+.|++.
T Consensus 322 G---G~i~g---~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~ 387 (481)
T PLN02822 322 G---GFCTG---SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDI 387 (481)
T ss_pred C---eEEEc---CHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 7 99976 8999998875443 2223 3466667766666543334678899999999999999875
No 124
>PRK10534 L-threonine aldolase; Provisional
Probab=99.91 E-value=3.7e-23 Score=203.51 Aligned_cols=258 Identities=14% Similarity=0.103 Sum_probs=174.2
Q ss_pred ccccccc--CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHH
Q 013892 130 ILDRSET--QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMM 207 (434)
Q Consensus 130 ~l~~~~~--~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l 207 (434)
++||++| +. +++.+++++.+... ....|++..+..+|++++++++ | + +.+++++|+++++...+
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~~-----~~~~Y~~~~~~~~L~~~la~~~----g--~--~~~~v~~~g~~a~~~~l 66 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAPV-----GDDVYGDDPTVNALQDYAAELS----G--K--EAALFLPTGTQANLVAL 66 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhccC-----CCcccCCCHHHHHHHHHHHHHh----C--C--CeEEEeCchHHHHHHHH
Confidence 4566666 55 78888888655332 2557977778999999999996 3 2 34567777888887777
Q ss_pred HHHhcCCCCEEEEcCCCChh-HHHH-HHHcC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 208 QLLIRSENDGILCPIPQYPL-YSAS-IALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 208 ~~l~~~~gd~Vlv~~p~y~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
.+++ .+||+|+++.|+|.. |... ....| ++++.++++ .+|.+|+++|++++++....+.++++|+++||+ ||
T Consensus 67 ~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G 141 (333)
T PRK10534 67 LSHC-ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NG 141 (333)
T ss_pred HHhc-CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CC
Confidence 7777 799999999988863 4321 23444 677777765 358999999999885411111147899999766 59
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeE-EE
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG-YM 363 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G-~~ 363 (434)
.+++.+++++|+++|++++++|++||+|........ ..+...... +.+ .+ +.||||.| |+ ++| |+
T Consensus 142 ~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~--~~~~~~~~~-----~~~--~~-~~s~SK~~-~~---~~G~~~ 207 (333)
T PRK10534 142 KVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAY--GCELKEITQ-----YCD--SF-TICLSKGL-GT---PVGSLL 207 (333)
T ss_pred eecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHc--CCCHHHHHh-----cCC--EE-EEEeEcCC-CC---cccceE
Confidence 999999999999999999999999999873111100 011111111 122 22 24899988 54 367 57
Q ss_pred EEecCCHHHHHHHHHHhhccc---CCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 364 EVTGFSAEVREQIYKVASVNL---CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~~~~---~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++ ++++++.+.+++..+. ..+.+.|.++...+++ ..+.++...++|+.+.+.|++++
T Consensus 208 ~~---~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~---~~~~~~~~~~~r~~l~~~L~~~g 267 (333)
T PRK10534 208 VG---NRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKH---NVARLQEDHDNAAWLAEQLREAG 267 (333)
T ss_pred Ec---CHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHhCC
Confidence 55 9999999988776332 2234556666666643 12344445557788888888753
No 125
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.91 E-value=4.8e-22 Score=196.58 Aligned_cols=265 Identities=18% Similarity=0.178 Sum_probs=178.4
Q ss_pred ccccccc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 013892 130 ILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (434)
Q Consensus 130 ~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 206 (434)
.++|+.+ +..-|+++++++.+.+++... ....|....|....++.+.+.+.+.+|. ++ .++++++++++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~-~iv~~sg~~a~~~~ 77 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGV-GAGGSRLISGTSDLHEELEEELAEFHGK---EA-ALVFSSGYAANDGV 77 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHHHHHHhCC-CCCCcCeecCCchHHHHHHHHHHHHhCC---CC-EEEeccHHHHHHHH
Confidence 4566666 334468899999999976432 1233433334444444444444443442 23 45555556788887
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC
Q 013892 207 MQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (434)
Q Consensus 207 l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~ 286 (434)
+++++ ++||.|+++.|+|+.+...++..|++++.++ .+|.+.+++.+++... ..+++++++++|+||||..
T Consensus 78 ~~~~~-~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~le~~i~~~~~-~~~~~~v~~~~~~~~tG~~ 148 (349)
T cd06454 78 LSTLA-GKGDLIISDSLNHASIIDGIRLSGAKKRIFK-------HNDMEDLEKLLREARR-PYGKKLIVTEGVYSMDGDI 148 (349)
T ss_pred HHHhc-CCCCEEEEehhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHHhhc-cCCCeEEEEeccccCCCCc
Confidence 88887 7999999999999999988999999998875 3477888888876321 1257788888999999998
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 287 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
.+ +++|+++|+++|+++|+|++|....+.... ..+... . .. .+...++++|+||.| |. ++||++.
T Consensus 149 ~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~--~~~~~~-~-~~---~~~~~i~~~s~sK~~-~~---~gG~i~~- 213 (349)
T cd06454 149 AP---LPELVDLAKKYGAILFVDEAHSVGVYGPHG--RGVEEF-G-GL---TDDVDIIMGTLGKAF-GA---VGGYIAG- 213 (349)
T ss_pred cC---HHHHHHHHHHcCCEEEEEccccccccCCCC--CChhhh-c-cc---cccCcEEEeechhhh-cc---cCCEEEC-
Confidence 87 889999999999999999999754443221 111001 0 01 112358899999998 54 5599876
Q ss_pred cCCHHHHHHHHHHhh---cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 367 GFSAEVREQIYKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 367 ~~~~~~~~~l~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++++++.+..... .....+...+.++...++.....+..++++.+.++.+.+.|++.
T Consensus 214 --~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 273 (349)
T cd06454 214 --SKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL 273 (349)
T ss_pred --CHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Confidence 7888888765433 12245555555555555443335667888888899998888765
No 126
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.90 E-value=7e-22 Score=196.67 Aligned_cols=211 Identities=14% Similarity=0.138 Sum_probs=159.1
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCC-C---CCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC
Q 013892 138 GLFSADSIERAWQILDQIPGRAT-G---AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS 213 (434)
Q Consensus 138 ~~~p~~v~~~~~~~l~~~~~~~~-~---~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~ 213 (434)
....+.+++++.+.......... . .+....-+.++++.+++++ | + +++++|+|+++++..++..++ .
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~--~~i~~~~g~t~al~~~l~~~~-~ 81 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL----G--M--DEARVTPGAREGKFAVMHSLC-E 81 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc----C--C--ceEEEeCCHHHHHHHHHHHhc-C
Confidence 35677788887776633211000 1 1111122568888888876 4 2 789999999999999999998 7
Q ss_pred CCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc-CCCeeEEEEecCCCCCccCCCHHHH
Q 013892 214 ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK-GITVRALVVINPGNPTGQVLAEENQ 292 (434)
Q Consensus 214 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-g~~~~~i~l~~p~NPtG~~~~~~~l 292 (434)
+||+|+++.++|......++..|++++.++.+.+++|.+|++.+++++++..++ +.++++|++++|+||||...+ +
T Consensus 82 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~ 158 (361)
T cd06452 82 KGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---A 158 (361)
T ss_pred CCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---H
Confidence 999999999988877778889999999999987656899999999999753221 236899999999999998866 8
Q ss_pred HHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHH
Q 013892 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (434)
Q Consensus 293 ~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~ 372 (434)
++|+++|+++|+++|+|++|...... + +. ..++ . .+++.|++|.+ + ++.|+||+++ ++++
T Consensus 159 ~~i~~~~~~~~~~vivD~a~~~g~~~----~-~~----~~~~---~---d~~~~s~~K~l-~-~~~~~G~l~~---~~~~ 218 (361)
T cd06452 159 KKIAKVCHEYGVPLLLNGAYTVGRMP----V-SG----KELG---A---DFIVGSGHKSM-A-ASAPIGVLAT---TEEW 218 (361)
T ss_pred HHHHHHHHHcCCeEEEECCcccCCcC----C-CH----HHcC---C---CEEEecCCccc-c-CCCCeEEEEE---CHHH
Confidence 89999999999999999999842211 1 11 1111 2 38899999999 5 4669999987 8889
Q ss_pred HHHHHHHh
Q 013892 373 REQIYKVA 380 (434)
Q Consensus 373 ~~~l~~~~ 380 (434)
++++.+..
T Consensus 219 ~~~l~~~~ 226 (361)
T cd06452 219 ADIVFRTS 226 (361)
T ss_pred HHHHhccc
Confidence 98886644
No 127
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.90 E-value=1.6e-21 Score=195.36 Aligned_cols=266 Identities=14% Similarity=0.130 Sum_probs=178.7
Q ss_pred CCccccccc-C--CCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHH
Q 013892 128 PSILDRSET-Q--GLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVH 204 (434)
Q Consensus 128 p~~l~~~~~-~--~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 204 (434)
..+||+..+ . ...++.+++++.+.+..... ....|....|...+++.+++.+.+.++ .++.|++++| ++++.
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~~g-~~~~~ 113 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAARRYGA-GSGGSRLVTGNSPAHEALEEELAEWFG---AERALLFSSG-YAANL 113 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCC-CCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEECcH-HHHHH
Confidence 344555544 1 23568899999988876331 123344444555555555555555445 2445555554 55666
Q ss_pred HHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 205 MMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 205 ~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
.++..++ ++||.|+++.|+|+.+...++..|++++.++. .|++.+++.+++. ..++.++++.+++||||
T Consensus 114 ~~l~~~~-~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~---~~~~~lvi~~~~~~~~G 182 (385)
T PRK05958 114 AVLTALA-GKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKW---RAGRALIVTESVFSMDG 182 (385)
T ss_pred HHHHHhC-CCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhc---cCCCeEEEEEecccCCC
Confidence 6777777 79999999999999999999999999888764 3788999988652 11244555557899999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEE
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~ 364 (434)
...+ +++|+++|+++|+++|+||+|..+.++..+. .... ...+. ..+ ++|++.||||.| |.+| ||++
T Consensus 183 ~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~--~~~~-~~~~~-~~~--~~i~~~s~sK~~-~~~G---g~~~ 249 (385)
T PRK05958 183 DLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGR--GLAA-EAGLA-GEP--DVILVGTLGKAL-GSSG---AAVL 249 (385)
T ss_pred CcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCC--chHH-hhCCC-CCC--ceEEEEechhhc-ccCC---cEEE
Confidence 9877 8999999999999999999998765653211 1111 11122 112 479999999999 6555 8987
Q ss_pred EecCCHHHHHHHHHHhh--c-ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 365 VTGFSAEVREQIYKVAS--V-NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 365 ~~~~~~~~~~~l~~~~~--~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
. ++++++.+.+... . ...+++..+.++...++..+..++..+++.++++.+.+.|++.
T Consensus 250 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T PRK05958 250 G---SETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL 310 (385)
T ss_pred c---CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 6 8888888765432 2 2234455555555555432222567788888999999988864
No 128
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.90 E-value=5.9e-22 Score=197.91 Aligned_cols=220 Identities=15% Similarity=0.169 Sum_probs=168.1
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----c
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----H 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~ 235 (434)
...|+.+. ..+|++.+|++. | .+++++|+|+++++..++.+++ ++||.|+++.|+|......+.. .
T Consensus 45 Y~R~~~p~-~~~le~~lA~l~----g----~~~v~~~~gg~~Ai~~~l~all-~~GD~Vl~~~p~y~~~~~~~~~~~~~~ 114 (382)
T TIGR02080 45 YSRSGNPT-RDLLQQALAELE----G----GAGAVVTNTGMSAIHLVTTALL-GPDDLLVAPHDCYGGTYRLLNALAKKG 114 (382)
T ss_pred ccCCCCch-HHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHc-CCCCEEEEcCCCcHHHHHHHHHHHhhc
Confidence 55665554 778888898886 2 4689999999999999999998 7999999999999865544332 2
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
|.++..++ ..|++.+++++++ ++|+|++++|+||||.+++ +++|+++|+++|+++|+|++|..+
T Consensus 115 ~~~v~~~d-------~~d~~~l~~ai~~------~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~ 178 (382)
T TIGR02080 115 CFRVLFVD-------QGDEQALRAALAQ------KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSP 178 (382)
T ss_pred CeEEEEEC-------CCCHHHHHHhcCc------CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 44555442 2378999998876 7999999999999999998 788899999999999999999864
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~ 394 (434)
.+.. + + .++ .+ |+++|+||.+.|.+|+++|++++ .++++++.+...+. ...+.+++.++++
T Consensus 179 ~~~~--p---l-----~~g---aD---ivv~S~sK~l~G~~~~~~G~i~~--~~~~~~~~l~~~~~~~g~~~sp~~a~l~ 240 (382)
T TIGR02080 179 ALQN--P---L-----ALG---AD---LVLHSCTKYLNGHSDVIAGAVIA--KDPQVAEELAWWANNLGVTGGAFDSYLT 240 (382)
T ss_pred ccCC--c---h-----hhC---CC---EEEeecceeccCCCCceeEEEEe--CCHHHHHHHHHHHHccCCCCCHHHHHHH
Confidence 3321 1 1 111 23 78899999997778899999864 47888888877665 4556777776655
Q ss_pred HHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++.-+.+....++..++...+.+.|+.+.
T Consensus 241 ---lr~l~tl~~R~~~~~~na~~~a~~L~~~p 269 (382)
T TIGR02080 241 ---LRGLRTLVARMRLQQRNAQAIVEYLQTQP 269 (382)
T ss_pred ---HcccchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444566667788888888888888654
No 129
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=8.2e-22 Score=199.48 Aligned_cols=262 Identities=15% Similarity=0.114 Sum_probs=184.5
Q ss_pred ccccccc---CCCCCHHHHHHHHHHHHcCCCC--CC-CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 130 ILDRSET---QGLFSADSIERAWQILDQIPGR--AT-GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 130 ~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~--~~-~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
+++|.++ +...++.+++++.+.+...+.. +. ..|+......+|++.+|+++ | .++.|++++|+ +++
T Consensus 48 ~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~----g---~~~~i~~~sG~-~a~ 119 (410)
T PRK13392 48 VTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH----G---KESALLFTSGY-VSN 119 (410)
T ss_pred EEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh----C---CCCEEEECcHH-HHH
Confidence 5666666 6677999999999988765320 01 12333333667888888876 4 25678888875 566
Q ss_pred HHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCC
Q 013892 204 HMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (434)
Q Consensus 204 ~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NP 282 (434)
..++..+.. .+|+.|+++...|..+...++..|+++..++.+ |.+.+++.++... ..++++|++++|+||
T Consensus 120 ~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~ 190 (410)
T PRK13392 120 DAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-------DLADLEEQLASVD--PDRPKLIAFESVYSM 190 (410)
T ss_pred HHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhcc--CCCCEEEEEeCCCCC
Confidence 666665541 378989888888888888888889988776532 5566777665431 126889999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEE
Q 013892 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (434)
Q Consensus 283 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~ 362 (434)
||.+++ +++|.++|+++|+++|+||+|....++..+ ..+... ..+. ++. .|+++||||.| |++| ||
T Consensus 191 tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g--~g~~~~-~~~~---~~~-div~~tlsK~~-g~~G---G~ 256 (410)
T PRK13392 191 DGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARG--GGIAER-DGLM---DRI-DMIQGTLAKAF-GCLG---GY 256 (410)
T ss_pred Cccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCC--Cchhhh-ccCC---CCC-cEEEEEChHhh-hccc---ch
Confidence 999998 889999999999999999999965565331 112111 1111 121 27889999999 6777 99
Q ss_pred EEEecCCHHHHHHHHHHhhc---ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 363 MEVTGFSAEVREQIYKVASV---NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++ ++++++.+.+.... ....+++.+.++..+|+..+.....++++.++++.+.+.|++.
T Consensus 257 ~~~---~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (410)
T PRK13392 257 IAA---SADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN 319 (410)
T ss_pred hhc---CHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 976 88999988876542 2344557777777777655445566788889999999988875
No 130
>PRK06460 hypothetical protein; Provisional
Probab=99.90 E-value=3.2e-22 Score=199.61 Aligned_cols=213 Identities=14% Similarity=0.156 Sum_probs=157.2
Q ss_pred cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC----hhHHHHHHHcCCeEEEE
Q 013892 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY----PLYSASIALHGGTLVPY 242 (434)
Q Consensus 167 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y----~~~~~~~~~~g~~~~~~ 242 (434)
....+|++.+|+++ | . ...+++++| ++++..++..++ ++||+|+++.|.| ..|...++..|+++..+
T Consensus 45 p~~~~L~~~lA~l~----g--~-~~~v~~~sG-~~ai~~~l~al~-~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~ 115 (376)
T PRK06460 45 PTVLELTKKIVELE----N--A-EMGVAFSSG-MGAISTTALALL-KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS 115 (376)
T ss_pred ccHHHHHHHHHHHh----C--C-CcEEEeCCH-HHHHHHHHHHHh-CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence 45889999999997 2 2 234555554 689999999888 7999999997654 45667788889998888
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCC
Q 013892 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (434)
Q Consensus 243 ~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 322 (434)
+.++ .+.+++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|......
T Consensus 116 ~~~~-------~~~l~~~~~~------~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~~~---- 175 (376)
T PRK06460 116 NPGS-------DNIIEKAKSK------RYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPINQ---- 175 (376)
T ss_pred CCCC-------HHHHHHhcCC------CceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCccccC----
Confidence 7542 2333333333 7899999999999999999 667889999999999999999763211
Q ss_pred ccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC
Q 013892 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP 401 (434)
Q Consensus 323 ~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~ 401 (434)
. .. .. + ..|+++|+||.|+|..|.|+||++. ++++++++.+.+. ...+.++. .+..+++..
T Consensus 176 -~---~l--~~-----~-~divv~S~sK~l~G~~~~~~G~~~~---~~~l~~~l~~~~~~~g~~~~~~---~a~~~l~~~ 237 (376)
T PRK06460 176 -K---PL--EL-----G-ADIVVHSASKFLAGHNDVIAGLAAG---YGKLLNVIDQMRRTLGTSLDPH---AAYLTLRGI 237 (376)
T ss_pred -C---hh--hc-----C-CCEEEeecceeccCCCCceEEEEec---CHHHHHHHHHHHHhcCCCCCHH---HHHHHHhch
Confidence 0 11 01 1 1388999999986544578999976 8899999987765 33344443 344455555
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 402 KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 402 ~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++++...++..++++.+.+.|+++.
T Consensus 238 ~~l~~r~~~~~~n~~~l~~~L~~~p 262 (376)
T PRK06460 238 KTLKIRMDVINRNAEQIAEFLEGHP 262 (376)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6778889999999999999999763
No 131
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=9.1e-22 Score=196.69 Aligned_cols=220 Identities=14% Similarity=0.154 Sum_probs=172.2
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH----Hc
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LH 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~----~~ 235 (434)
...|+.+. ...|++++|++. | .+++++++|+++++..++..++ ++||+|+++.|+|+.....+. ..
T Consensus 46 Y~R~~~pt-~~~L~~~lA~l~----g----~~~~i~~~sg~~Ai~~~l~~l~-~~GD~Vl~~~~~y~~~~~~~~~~~~~~ 115 (386)
T PRK08045 46 YSRRGNPT-RDVVQRALAELE----G----GAGAVLTNTGMSAIHLVTTVFL-KPGDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_pred eeCCCCcc-HHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHHc-CCCCEEEEcCCCcHHHHHHHHHHHhhC
Confidence 45566554 778999999886 3 2469999999999999999988 799999999999996443332 23
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
|.++..++ ..|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 116 gi~v~~vd-------~~d~e~l~~~l~~------~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~ 179 (386)
T PRK08045 116 CYRVLFVD-------QGDEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSP 179 (386)
T ss_pred CeEEEEeC-------CCCHHHHHHhccc------CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcc
Confidence 34555543 3588999998876 7999999999999999998 788889999999999999999874
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~ 394 (434)
.+.. + + .++ .| ++++|++|.+.|..|.++|++++ .++++++.+..... ...+.+++.++++
T Consensus 180 ~~~~--p---l-----~~g---aD---ivv~S~tK~l~G~~d~~~G~vi~--~~~~~~~~l~~~~~~~g~~~~p~~~~l~ 241 (386)
T PRK08045 180 ALQN--P---L-----ALG---AD---LVLHSCTKYLNGHSDVVAGVVIA--KDPDVVTELAWWANNIGVTGGAFDSYLL 241 (386)
T ss_pred ccCC--c---h-----hhC---CC---EEEeecceeccCCCCceeEEEEe--CcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 3321 1 1 111 24 78999999997778889999864 36788888876555 6667888888888
Q ss_pred HHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
...|+. +...+++..+++..+.+.|+++.
T Consensus 242 ~rgl~t---l~~R~~~~~~na~~la~~L~~~p 270 (386)
T PRK08045 242 LRGLRT---LVPRMELAQRNAQAIVKYLQTQP 270 (386)
T ss_pred Hhhhcc---HHHHHHHHHHHHHHHHHHHHcCC
Confidence 777753 67788999999999999998764
No 132
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.90 E-value=4.9e-22 Score=199.88 Aligned_cols=214 Identities=16% Similarity=0.159 Sum_probs=163.6
Q ss_pred CCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCeEE
Q 013892 165 HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLV 240 (434)
Q Consensus 165 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~ 240 (434)
+..+..+|++++|+++ | .+++++++|+++++..++..++ ++||+|+++.|.|+.+... ++..|++++
T Consensus 62 ~~p~~~~Le~~iA~~~----g----~~~~l~~~sG~~Ai~~al~~ll-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~ 132 (400)
T PRK06234 62 GNPTSTEVENKLALLE----G----GEAAVVAASGMGAISSSLWSAL-KAGDHVVASDTLYGCTFALLNHGLTRYGVEVT 132 (400)
T ss_pred CCccHHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHh-CCCCEEEEecCccchHHHHHHHHHhhCCeEEE
Confidence 5566999999999997 2 2467888888899999888888 7999999999998865543 466899999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEccCCCCCccC
Q 013892 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE--GLVLLADEVYQENVYV 318 (434)
Q Consensus 241 ~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~li~Deay~~~~~~ 318 (434)
.++.. |++++++++++ ++++|++++|+||||.+.+ +++|.++|+++ |+++|+|++|....+.
T Consensus 133 ~vd~~-------d~e~l~~~i~~------~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~ 196 (400)
T PRK06234 133 FVDTS-------NLEEVRNALKA------NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ 196 (400)
T ss_pred EECCC-------CHHHHHHHhcc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC
Confidence 88743 78999999976 7999999999999999998 88889999997 9999999999876543
Q ss_pred CCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee-EEEEEecCCHHHHHHHHHHh--h-cccCCchHHHHHH
Q 013892 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVREQIYKVA--S-VNLCSNISGQILA 394 (434)
Q Consensus 319 ~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~~l~~~~--~-~~~~~~~~~q~~~ 394 (434)
.. + ..+ .+ |+++|+||.+ +.+|+|+ ||+++ ++++++.+.... . ...+.++...+++
T Consensus 197 ~~-----l-----~~g---~D---ivv~S~sK~l-~g~g~~~gG~v~~---~~~~~~~l~~~~~~~~~g~~l~p~~a~l~ 256 (400)
T PRK06234 197 RP-----L-----QLG---AD---VVVHSATKYL-NGHGDVIAGFVVG---KEEFINQVKLFGIKDMTGSVIGPFEAFLI 256 (400)
T ss_pred Cc-----h-----hhC---Cc---EEEeeccccc-cCCCCceeEEEEe---cHHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 21 0 111 23 8899999999 5688764 99876 788888876532 1 2344555555544
Q ss_pred HHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
..-+ +.++...++..++...+.+.|+++.
T Consensus 257 ~~~l---~tl~~r~~~~~~na~~~a~~L~~~~ 285 (400)
T PRK06234 257 IRGM---KTLQIRMEKHCKNAMKVAKFLESHP 285 (400)
T ss_pred Hhcc---CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4444 4455677777777888888877653
No 133
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.90 E-value=1.2e-21 Score=197.68 Aligned_cols=200 Identities=18% Similarity=0.168 Sum_probs=151.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCC-------cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHS-------QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~-------~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 211 (434)
..|+.+++++.+.+..... ...+... ..+.++|+.+++++ |.. ++++|++|+|+++++..++..+.
T Consensus 27 ~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~-~~~~i~~t~g~t~~l~~~~~~~~ 99 (398)
T TIGR03392 27 LKPQAVIDATQQFYRLSSG--TVHRSQHQQAQSLTARYELARQQVARFL----NAP-DAENIVWTRGTTESINLVAQSYA 99 (398)
T ss_pred CCCHHHHHHHHHHHHhcCC--CCCCcccHHHHHHHHHHHHHHHHHHHHh----CCC-CCCeEEEeCChHHHHHHHHHHhh
Confidence 4678899998888764322 2222222 23557888888887 311 46899999999999999999873
Q ss_pred ---cCCCCEEEEcCCCChh----HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 212 ---RSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 212 ---~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
.++||+|++++|.|+. +...++..|++++.++++.+ +.+|++.+++++++ ++++|++++|+||||
T Consensus 100 ~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG 171 (398)
T TIGR03392 100 RPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGAD--LLPDIRQLPELLTP------RTRILALGQMSNVTG 171 (398)
T ss_pred hccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCC--CCcCHHHHHHHhcc------CceEEEEECcccccc
Confidence 2689999999999875 45566788999999998643 57899999999976 799999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEE
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~ 364 (434)
.+++ +++|+++|+++|+++|+|++|....+. ..+ ..++ .| +++.|.+|.+ |.+| +||++
T Consensus 172 ~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~-----~~~----~~~~---~d---~~~~s~~K~~-gp~G--~G~l~ 230 (398)
T TIGR03392 172 GCPD---LARAITLAHQYGAVVVVDGAQGVVHGP-----PDV----QALD---ID---FYAFSGHKLY-GPTG--IGVLY 230 (398)
T ss_pred ccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCC-----CCh----hhcC---CC---EEEEeccccc-CCCc--eEEEE
Confidence 9998 888999999999999999999753221 111 1111 23 6678888977 7666 89998
Q ss_pred EecCCHHHHHHHH
Q 013892 365 VTGFSAEVREQIY 377 (434)
Q Consensus 365 ~~~~~~~~~~~l~ 377 (434)
+ ++++++.+.
T Consensus 231 ~---~~~~~~~~~ 240 (398)
T TIGR03392 231 G---KTELLEAMP 240 (398)
T ss_pred E---cHHHHhhCC
Confidence 7 788877663
No 134
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.90 E-value=1.4e-21 Score=197.36 Aligned_cols=250 Identities=16% Similarity=0.156 Sum_probs=172.7
Q ss_pred CCCHHHHHHHHHHHHcCCCCC-CCCCCC----CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh--
Q 013892 139 LFSADSIERAWQILDQIPGRA-TGAYSH----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-- 211 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~-~~~Y~~----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~-- 211 (434)
..|..+++++.+.+.+..... ...+.. ...+.++|+.+++++ |.. ++++|++|+|+++++..+++.+.
T Consensus 30 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~-~~~~i~~~~~~t~~i~~~~~~~~~~ 104 (401)
T PRK10874 30 LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL----NAP-DAKNIVWTRGTTESINLVAQSYARP 104 (401)
T ss_pred CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc----CCC-CCCEEEEECCHHHHHHHHHHHhhhc
Confidence 467889999888886532100 011111 122567777787776 421 68899999999999999999983
Q ss_pred -cCCCCEEEEcCCCChh----HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC
Q 013892 212 -RSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (434)
Q Consensus 212 -~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~ 286 (434)
..+||+|++++|.|+. +...++..|++++.++++. ++.+|++++++.+++ ++++|++++|+||||.+
T Consensus 105 ~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~i~~~~n~tG~~ 176 (401)
T PRK10874 105 RLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITP------RTRILALGQMSNVTGGC 176 (401)
T ss_pred cCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCc------CcEEEEEeCCcccccCc
Confidence 2589999999999865 4556678899999999864 467899999999976 79999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 287 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
++ +++|+++|+++|+++|+|++|....+. ..+ ..++ .+ +++.|++|.| |.+| +||+.+
T Consensus 177 ~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~-----~~~----~~~~---~d---~~~~s~~K~~-gp~G--~G~l~~- 234 (401)
T PRK10874 177 PD---LARAITLAHQAGMVVMVDGAQGAVHFP-----ADV----QALD---ID---FYAFSGHKLY-GPTG--IGVLYG- 234 (401)
T ss_pred CC---HHHHHHHHHHcCCEEEEECCccccccc-----CCc----hhcC---CC---EEEEeccccc-CCCc--cEEEEE-
Confidence 98 889999999999999999999643221 111 1111 23 6778999977 7667 588876
Q ss_pred cCCHHHHHHHHHHh---------------------h-cccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHH
Q 013892 367 GFSAEVREQIYKVA---------------------S-VNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSL 422 (434)
Q Consensus 367 ~~~~~~~~~l~~~~---------------------~-~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L 422 (434)
++++++.+.... . ..+.++..++.++..+++.- ...+...++..+.++.+.+.|
T Consensus 235 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l 312 (401)
T PRK10874 235 --KSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDAL 312 (401)
T ss_pred --chHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 788877664221 0 11245555555555555321 111233445555566666666
Q ss_pred HHH
Q 013892 423 ARR 425 (434)
Q Consensus 423 ~~~ 425 (434)
+++
T Consensus 313 ~~~ 315 (401)
T PRK10874 313 AKL 315 (401)
T ss_pred hcC
Confidence 543
No 135
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.90 E-value=2.4e-21 Score=193.42 Aligned_cols=225 Identities=13% Similarity=0.113 Sum_probs=161.1
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCC
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 248 (434)
+.++++.+|+++ | .+++++++|+++++..++..++ ++||.|+++.+.|......++..|++++.++.++++
T Consensus 53 ~~~~~e~lA~~~----g----~~~~~i~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~ 123 (370)
T TIGR02539 53 IHDFLEDLAEFL----G----MDEARVTHGAREGKFAVMHALC-KEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHP 123 (370)
T ss_pred HHHHHHHHHHHh----C----CCceEEECChHHHHHHHHHHhh-CCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcc
Confidence 456777788876 3 2467789999999999999998 799999999888766557789999999999987666
Q ss_pred CCCCCHHHHHHHHHHHHhc-CCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchH
Q 013892 249 GWGLETSEVKKQLEAAKAK-GITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (434)
Q Consensus 249 ~~~~d~~~l~~~l~~~~~~-g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~ 327 (434)
+|.+|+++|++++++...+ +.++++|++++|+||||...+ +++|+++|+++|+++|+||+|....... +..
T Consensus 124 ~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~~-----~~~ 195 (370)
T TIGR02539 124 EYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMPV-----SAK 195 (370)
T ss_pred cCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcCC-----CHH
Confidence 7899999999999753221 125789999999999999888 8888999999999999999998742211 111
Q ss_pred HHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcc---------cCCchHHHHHHHHHc
Q 013892 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVN---------LCSNISGQILASLVM 398 (434)
Q Consensus 328 ~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~q~~~~~~l 398 (434)
.. ..| ++++|+||.| | +|.|+||+++ ++++++.+......+ ..+....+.++...+
T Consensus 196 ----~~---~~d---i~v~s~sK~~-~-~~g~~G~l~~---~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 260 (370)
T TIGR02539 196 ----EI---GAD---FIVGSGHKSM-A-ASGPCGVLGM---SEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASF 260 (370)
T ss_pred ----Hc---CCC---EEEeeCcccc-c-CCCCEEEEEE---CHHHHhhhcccccCCccceeeeecccccccHHHHHHHHH
Confidence 11 123 6679999999 5 5778999987 899999887654311 111112333333344
Q ss_pred CC-CCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 399 SP-PKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 399 ~~-~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.. .+.+++..+.+. +++.+.+.|+++.
T Consensus 261 ~~~~~~l~~~~~~~~-~~~~l~~~L~~~g 288 (370)
T TIGR02539 261 PHVVERVKRWDEEVK-KTRWFVAELEDIG 288 (370)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHhCC
Confidence 32 122222233333 3457888887754
No 136
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.90 E-value=7.5e-22 Score=197.63 Aligned_cols=264 Identities=17% Similarity=0.183 Sum_probs=181.2
Q ss_pred Cccccccc----CC-CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET----QG-LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~----~~-~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
.+|||..+ +. ..++.+.+++.+.+.+... ....|.. +.++.+++.+.+.+| .+++++++|+++++
T Consensus 28 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~-----~~~~~l~~~la~~~g----~~~~~~~~sg~~a~ 97 (379)
T TIGR00707 28 EYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVH-VSNLYYT-----EPQEELAEKLVEHSG----ADRVFFCNSGAEAN 97 (379)
T ss_pred EEEEcCcchhhccCCCCCHHHHHHHHHHHhhccc-cccccCC-----HHHHHHHHHHHhhCC----CCEEEEeCCcHHHH
Confidence 35565552 22 3458899999888876432 1223432 344455555554445 24899999999999
Q ss_pred HHHHHHHhc--C----CCCEEEEcCCCChhHHHHHHHcCCeEEE----EecCCCCCCCC--CHHHHHHHHHHHHhcCCCe
Q 013892 204 HMMMQLLIR--S----ENDGILCPIPQYPLYSASIALHGGTLVP----YYLDEATGWGL--ETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 204 ~~~l~~l~~--~----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----~~~~~~~~~~~--d~~~l~~~l~~~~~~g~~~ 271 (434)
..+++++.. . ++|+|++++|+|..+...+...+..... .++..+..+.. |++.+++.+++ ++
T Consensus 98 ~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 171 (379)
T TIGR00707 98 EAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD------ET 171 (379)
T ss_pred HHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh------Ce
Confidence 998886521 1 3799999999999887776666554321 22222211111 89999998876 78
Q ss_pred eEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCC
Q 013892 272 RALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSK 350 (434)
Q Consensus 272 ~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK 350 (434)
++|+++.++||+|.. ++.+++++|.++|+++|+++|+||+|.++.+.+. +.++. ... ..++ ++ +|||
T Consensus 172 ~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~--~~~~~----~~~-~~~d--~~---t~sK 239 (379)
T TIGR00707 172 AAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGK--FFAYE----HYG-IEPD--II---TLAK 239 (379)
T ss_pred eEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hhhHH----hcC-CCCC--EE---EEcc
Confidence 899987667777764 6899999999999999999999999998655432 11111 111 2244 23 6899
Q ss_pred CCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 351 GYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 351 ~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.+ + +|+|+||+++ ++++++.+..... ...+.+++.|.++..+|+..+. .+.+++++++++.+.+.|++..
T Consensus 240 ~~-~-~G~riG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~-~~~~~~~~~~~~~~~~~l~~~~ 310 (379)
T TIGR00707 240 GL-G-GGVPIGATLA---KEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEK-ERLLENVKEKGDYFKERLEELG 310 (379)
T ss_pred cc-c-CCcccEEEEE---cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHH
Confidence 99 6 8999999987 8899988876432 4456788999988877753211 2567788888888888888654
No 137
>PRK07179 hypothetical protein; Provisional
Probab=99.89 E-value=6.7e-21 Score=192.64 Aligned_cols=258 Identities=15% Similarity=0.117 Sum_probs=180.9
Q ss_pred ccccccc---CCCCCHHHHHHHHHHHHcCCCCC--CCCCC-CCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 130 ILDRSET---QGLFSADSIERAWQILDQIPGRA--TGAYS-HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 130 ~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~--~~~Y~-~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
++||+.+ ...-.|++++++.+.+.+.+... ...|. ......+|++.+|+++ | .+.+++++|+++|+
T Consensus 56 ~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g----~~~~~~~~sG~~An 127 (407)
T PRK07179 56 AIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT----G----FESCLLCQSGWAAN 127 (407)
T ss_pred EEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh----C----CCcEEEECCHHHHH
Confidence 5666666 34457889999999887643211 11121 1123567778888876 3 24678899999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC
Q 013892 204 HMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (434)
Q Consensus 204 ~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt 283 (434)
..++++++ .+||.|++..+.|......++..|++++.++ ..|+++|++++++. ++++|++++|+|||
T Consensus 128 ~~~l~~l~-~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~-----~~~lV~v~~v~n~t 194 (407)
T PRK07179 128 VGLLQTIA-DPNTPVYIDFFAHMSLWEGVRAAGAQAHPFR-------HNDVDHLRRQIERH-----GPGIIVVDSVYSTT 194 (407)
T ss_pred HHHHHHhC-CCCCEEEEECCcCHHHHHHHHHCCCeEEEec-------CCCHHHHHHHHHhc-----CCeEEEECCCCCCC
Confidence 99999998 6899999999999998888888898887764 34899999998752 46788888999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEE
Q 013892 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM 363 (434)
Q Consensus 284 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~ 363 (434)
|.+.+ +++|.++|+++|+++|+||+|....++..+ ..+. ..++ ..+.+ .+++.|+||.+ | .|+||+
T Consensus 195 G~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g--~g~~---~~~~-~~~~v-di~~~S~sK~~-g---~~~G~l 260 (407)
T PRK07179 195 GTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQG--AGLV---AELG-LTSRV-HFITASLAKAF-A---GRAGII 260 (407)
T ss_pred Ccccc---HHHHHHHHHHcCCEEEEECcccccCcCCCC--CchH---HhcC-CCCCC-CEEEeechHhh-h---ccCeEE
Confidence 99999 788999999999999999999865444321 1111 1111 01111 27889999988 3 379999
Q ss_pred EEecCCHHHHHHHHHHhh--cccCC-chHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 364 EVTGFSAEVREQIYKVAS--VNLCS-NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~--~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++ ++++++.+..... .+.+. ++....++...++..+..++.+++++++++.+.+.|+++
T Consensus 261 ~~---~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~ 322 (407)
T PRK07179 261 TC---PRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL 322 (407)
T ss_pred Ee---CHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 77 8888888765432 22222 222222233334333334567888999999999998875
No 138
>PLN02483 serine palmitoyltransferase
Probab=99.89 E-value=9.9e-21 Score=194.76 Aligned_cols=268 Identities=15% Similarity=0.163 Sum_probs=182.3
Q ss_pred CCCccccccc---CCC-CCHHHHHHHHHHHHcCCC---CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCCh
Q 013892 127 HPSILDRSET---QGL-FSADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGA 199 (434)
Q Consensus 127 ~p~~l~~~~~---~~~-~p~~v~~~~~~~l~~~~~---~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~ 199 (434)
....+||+++ +.. .++...+++.+++.+.+. .....|+...++.++++.+|+++. .++.|++++|.
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~~G~ 171 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFGMGY 171 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEECCHH
Confidence 3446777776 222 234455555555555432 123458888889999999999983 35678888876
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC-CC-----eeE
Q 013892 200 SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG-IT-----VRA 273 (434)
Q Consensus 200 ~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g-~~-----~~~ 273 (434)
...+ .++.+++ ++||.|++++|+|+.+...++..|++++.++.+ |.+++++.+++....+ ++ .++
T Consensus 172 ~an~-~~i~al~-~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~ 242 (489)
T PLN02483 172 ATNS-TIIPALI-GKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
T ss_pred HHHH-HHHHHhC-CCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCceE
Confidence 5544 6666777 799999999999999999999999999999853 5677777776432111 12 256
Q ss_pred EEEecC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCC
Q 013892 274 LVVINP-GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGY 352 (434)
Q Consensus 274 i~l~~p-~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~ 352 (434)
++++++ .|++|.+.+ +++|+++|+++|+++|+||+|....++..+ ....... .+. +....|+++||||+|
T Consensus 243 livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G--~g~~~~~-~v~---~~~~dI~~~SfSKs~ 313 (489)
T PLN02483 243 IVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTG--RGVCELL-GVD---PADVDIMMGTFTKSF 313 (489)
T ss_pred EEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCC--CchHHhc-CCC---cccCcEEEEecchhc
Confidence 666655 799999987 999999999999999999999854444321 1111111 111 111358999999999
Q ss_pred CCCCCceeEEEEEecCCHHHHHHHHHHhh--cc--cCCchHHHHHHHHH---cCC--CCCChHHHHHHHHHHHHHHHHHH
Q 013892 353 YGECGKRGGYMEVTGFSAEVREQIYKVAS--VN--LCSNISGQILASLV---MSP--PKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 353 ~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~--~~~~~~~q~~~~~~---l~~--~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
|++| ||+++ ++++++.+..... .+ ..++...|.++..+ +.. .+...+.+++++++++.+.+.|+
T Consensus 314 -g~~G---G~i~~---~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~ 386 (489)
T PLN02483 314 -GSCG---GYIAG---SKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQ 386 (489)
T ss_pred -ccCc---eEEEc---CHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHH
Confidence 6555 99976 8999999987632 11 22334444332222 212 23456678899999999999998
Q ss_pred HHH
Q 013892 424 RRA 426 (434)
Q Consensus 424 ~~~ 426 (434)
++.
T Consensus 387 ~~G 389 (489)
T PLN02483 387 KMG 389 (489)
T ss_pred HCC
Confidence 863
No 139
>PLN02721 threonine aldolase
Probab=99.89 E-value=1.8e-21 Score=192.87 Aligned_cols=250 Identities=12% Similarity=0.074 Sum_probs=157.4
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC-CCCEE
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-ENDGI 218 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~-~gd~V 218 (434)
+++.+.+++.+. . ... ....|.+. ..+|++++++++.. +.+++++++++++..++..++ + +||+|
T Consensus 18 ~~~~~~~a~~~~-~-~~~-~~~~~~~~--~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~~~l~~~~-~~~gd~V 83 (353)
T PLN02721 18 PTDAMRAAMANA-E-VDD-DVLGYDPT--ALRLEEEMAKIFGK--------EAALFVPSGTMGNLISVLVHC-DVRGSEV 83 (353)
T ss_pred CCHHHHHHHHhc-c-CCC-cccCCCHH--HHHHHHHHHHHhCC--------ceeEEecCccHHHHHHHHHHc-cCCCCeE
Confidence 455566665432 1 111 13334333 78999999999832 234555555556657777766 5 99999
Q ss_pred EEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC-CCeeEEEEec-CCCCCccCCCHHHHH
Q 013892 219 LCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG-ITVRALVVIN-PGNPTGQVLAEENQR 293 (434)
Q Consensus 219 lv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g-~~~~~i~l~~-p~NPtG~~~~~~~l~ 293 (434)
++++|+|..... .+...|++++.++.++ ++.+|++.+++++++...++ +++++|++++ ++||||.+++.++++
T Consensus 84 l~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~ 161 (353)
T PLN02721 84 ILGDNSHIHLYENGGISTLGGVHPRTVKNNE--DGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTD 161 (353)
T ss_pred EEcCccceehhcccchhhhcCceeEecCCCc--CCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHH
Confidence 999999864443 5677899999998764 35789999999997432211 2688999986 488999999999999
Q ss_pred HHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEE-EEEecCCHHH
Q 013892 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY-MEVTGFSAEV 372 (434)
Q Consensus 294 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~-~~~~~~~~~~ 372 (434)
+|.++|+++|+++|+||+|....+... ..+....... .+ .++.|+||.| + | ++|| ++. ++++
T Consensus 162 ~l~~l~~~~g~~livD~a~~~~~~~~~--~~~~~~~~~~-----~d---~~~~s~sK~l-~--~-~~G~~~~~---~~~~ 224 (353)
T PLN02721 162 KVGELAKRHGLKLHIDGARIFNASVAL--GVPVHRLVKA-----AD---SVSVCLSKGL-G--A-PVGSVIVG---SKSF 224 (353)
T ss_pred HHHHHHHHcCCEEEEEchhhhcchhhh--CCCHHHHhhh-----CC---EEEEeccccc-C--C-ceeeEEec---CHHH
Confidence 999999999999999999863221100 1111111111 22 3345799988 3 3 4666 443 8899
Q ss_pred HHHHHHHhhc-ccCCchHHHHHH--HHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 373 REQIYKVASV-NLCSNISGQILA--SLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 373 ~~~l~~~~~~-~~~~~~~~q~~~--~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++.+...... ...+...++.++ ...++ +..+ ..++..++++.+.+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~-~~~~~~~~~~~l~~~L~~~ 277 (353)
T PLN02721 225 IRKAKRLRKTLGGGMRQVGVLAAAALVALQ--ENVP-KLEDDHKKAKLLAEGLNQI 277 (353)
T ss_pred HHhHHHHHHhcCCCeehhHHHHHHHHHHHH--HHHH-HHHHHHHHHHHHHHHHHhC
Confidence 8887776552 222222332222 22222 1122 2333455667777777664
No 140
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.89 E-value=1.2e-21 Score=197.34 Aligned_cols=262 Identities=15% Similarity=0.145 Sum_probs=184.5
Q ss_pred CCccccccc----CCCC-CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET----QGLF-SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~----~~~~-p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
...+|+..+ ..+. ++.+.+++.+.+..... ....| ..++++++++++.+..| .+++++|+|++++
T Consensus 39 ~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~-----~~~~~~~la~~l~~~~~----~~~v~~~~gg~eA 108 (396)
T PRK02627 39 KEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIH-TSNLY-----YIEPQEELAEKLVELSG----MDKVFFCNSGAEA 108 (396)
T ss_pred CEEEECCccHHhccCCCCCHHHHHHHHHHHhhccc-ccccc-----CCHHHHHHHHHHHhhcC----CCEEEECCCcHHH
Confidence 345666554 2333 57899998888875321 11223 35788888888877644 4799999999999
Q ss_pred HHHHHHHHhcCCC-------CEEEEcCCCChhHHHHHHHcCCeEE----EEecCCCCCC----CCCHHHHHHHHHHHHhc
Q 013892 203 VHMMMQLLIRSEN-------DGILCPIPQYPLYSASIALHGGTLV----PYYLDEATGW----GLETSEVKKQLEAAKAK 267 (434)
Q Consensus 203 l~~~l~~l~~~~g-------d~Vlv~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~----~~d~~~l~~~l~~~~~~ 267 (434)
+..+++.+. ..+ ++|++..++|..+.......+.... ..++. .++ ..|++++++.+.+
T Consensus 109 ~~~al~~a~-~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~~---- 181 (396)
T PRK02627 109 NEAAIKLAR-KYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAITD---- 181 (396)
T ss_pred HHHHHHHHH-HHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcCC----
Confidence 999999765 222 6899999999887665544433221 11111 111 2288999998854
Q ss_pred CCCeeEEEEecCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 268 GITVRALVVINPGNPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
++++|+++.++||+| .+++.+.+++|.++|+++|+++|+||+|.++.+.+. +.++.. .+ ..+| + .
T Consensus 182 --~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~--~~~~~~----~~-~~pd--i---~ 247 (396)
T PRK02627 182 --KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK--LFAYQH----YG-IEPD--I---M 247 (396)
T ss_pred --CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc--eeeehh----cC-CCCC--E---E
Confidence 789999998899999 688999999999999999999999999999765543 222211 11 2244 2 3
Q ss_pred cCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 347 SVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 347 S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+|||.+ | +|+|+||+++ ++++++.+.... ..+.+.+++.|.++..+++..+. ++..++.+++.+.+.+.|.+.
T Consensus 248 t~sK~~-~-~G~rig~~~~---~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~ 321 (396)
T PRK02627 248 TLAKGL-G-GGVPIGAVLA---KEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEE-EGLLENAAEVGEYLRAKLREL 321 (396)
T ss_pred EEcchh-h-CCcccEEEEE---cHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHH
Confidence 799999 6 8999999987 888888886533 35567899999998888864322 245667777777777777665
Q ss_pred H
Q 013892 426 A 426 (434)
Q Consensus 426 ~ 426 (434)
.
T Consensus 322 ~ 322 (396)
T PRK02627 322 L 322 (396)
T ss_pred H
Confidence 4
No 141
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.89 E-value=2.7e-21 Score=193.85 Aligned_cols=210 Identities=14% Similarity=0.170 Sum_probs=160.0
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~~ 244 (434)
..++++.+|+++ | .+++++++|+++|+..++..++ ++||+|+++.+.|++... .+...|++++.++.
T Consensus 63 ~~~le~~la~l~----g----~~~~v~~ssG~~Ai~~al~al~-~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 63 VTMFQERLAALE----G----AEACVATASGMAAILAVVMALL-QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 667888888876 3 3568999999999999998888 799999999999876443 45668999998875
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
+ |++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+.. +
T Consensus 134 ~-------d~~~l~~~i~~------~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~--p-- 193 (390)
T PRK08133 134 T-------DLDAWRAAVRP------NTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ--P-- 193 (390)
T ss_pred C-------CHHHHHHhcCc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC--c--
Confidence 3 68889888876 7999999999999999998 8999999999999999999997643321 1
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeE-EEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCC
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG-YMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPK 402 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G-~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~ 402 (434)
+ .++ .+ ++++|+||.+ +.+|.++| |++. +++.++.+..... ...+.+...+ ..+++..+
T Consensus 194 -l-----~~g---~D---ivv~S~sK~~-~g~g~~~GG~vv~---~~~~~~~~~~~~~~~g~~~~~~~a---~~~l~gl~ 254 (390)
T PRK08133 194 -L-----KLG---AD---VVIHSATKYL-DGQGRVLGGAVVG---SKELMEEVFGFLRTAGPTLSPFNA---WVFLKGLE 254 (390)
T ss_pred -h-----hhC---Cc---EEEeecceee-cCCcceEeEEEEc---CHHHHHHHHHHHHHhCCCCCHHHH---HHHHcccc
Confidence 1 111 23 7899999999 56899875 5543 6777777665443 3334444443 34445545
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.+....+++.++...+.+.|+++.
T Consensus 255 tl~~R~~~~~~~a~~la~~L~~~p 278 (390)
T PRK08133 255 TLSLRMEAHSANALALAEWLEAHP 278 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 677788888899999999988763
No 142
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.89 E-value=4.2e-21 Score=193.52 Aligned_cols=261 Identities=17% Similarity=0.145 Sum_probs=181.8
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCC-----CcchHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSH-----SQGIKG 171 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~-----~~G~~~ 171 (434)
+.++++++|+|+. ..|+.+.+.+.+. . ....|.+ ..|.++
T Consensus 20 ~~~~~l~~g~~~~-----------------------------~~p~~~~~~~~~~--~----~~~~~~~~~~~~~~g~~~ 64 (398)
T cd00613 20 QSMSFLGSGTYKH-----------------------------NPPAVIKRNILEN--E----FYTAYTPYQPEISQGRLQ 64 (398)
T ss_pred cCcccccccccCC-----------------------------cCcHHHHHHhccc--c----CcccCCCCChhhhhhHHH
Confidence 4679999999986 2344344334333 2 1345665 789999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCEEEcCC-hHHHHHHHHHHHhcCC--CCEEEEcCCCChhHHHHHHHcC----CeEEEEec
Q 013892 172 LRDTIAAGIEARDGFPADPNDIFLTDG-ASPAVHMMMQLLIRSE--NDGILCPIPQYPLYSASIALHG----GTLVPYYL 244 (434)
Q Consensus 172 lr~~ia~~~~~~~g~~~~~~~i~~t~G-~~~al~~~l~~l~~~~--gd~Vlv~~p~y~~~~~~~~~~g----~~~~~~~~ 244 (434)
+++++++++.+.+|. +.++++++++ ++++...++.+++ .+ ||+|++++|.|+.+...+...| ++++.+++
T Consensus 65 ~~~~~~~~la~~~g~--~~~~v~~~~~g~~~~~~~~~~~~~-~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~ 141 (398)
T cd00613 65 ALFELQTMLCELTGM--DVANASLQDEATAAAEAAGLAAIR-AYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPS 141 (398)
T ss_pred HHHHHHHHHHHHHCC--CccceeccCchHHHHHHHHHHHHh-cccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEecc
Confidence 999999999998874 4446767764 4455555555555 55 9999999999999998888887 89999887
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
++ ++.+|++++++++.+ ++++|++++|+ |||.+. +.+++|.++|+++|+++|+|+++........
T Consensus 142 ~~--~~~~d~~~l~~~i~~------~t~~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~~~---- 206 (398)
T cd00613 142 DE--GGTVDLEALKEEVSE------EVAALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGLKP---- 206 (398)
T ss_pred CC--CCCcCHHHHHHhcCC------CeEEEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCCCC----
Confidence 54 347899999998865 79999999985 899994 3569999999999999999998754221110
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCC----CceeEEEEEecCCHHHHHHHHHH---------------------
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC----GKRGGYMEVTGFSAEVREQIYKV--------------------- 379 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~----G~R~G~~~~~~~~~~~~~~l~~~--------------------- 379 (434)
. ..++ .| +++.|++|.+ + | |+|+||+.+ ++++++.+...
T Consensus 207 -~----~~~~---~d---~~~~s~~K~~-~-p~g~Ggp~~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (398)
T cd00613 207 -P----GEYG---AD---IVVGNLQKTG-V-PHGGGGPGAGFFAV---KKELVRFLPGRLVGVTKDAEGNRAFRLALQTR 270 (398)
T ss_pred -h----HHcC---CC---EEEeeccccC-C-CCCCCCCceeEEEE---hhhhHhhCCCCeeccccccCCCcceEEecccc
Confidence 0 0111 33 8899999976 3 4 799999987 77777764110
Q ss_pred ---------hh-cccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 380 ---------AS-VNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 380 ---------~~-~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.. ...+.+...+.++..+... .+..++..+++++.++.+.+.|++..
T Consensus 271 ~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~ 328 (398)
T cd00613 271 EQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVG 328 (398)
T ss_pred hhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 01 1222333444443333322 23345677888999999999888753
No 143
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.89 E-value=4.4e-21 Score=193.30 Aligned_cols=202 Identities=17% Similarity=0.231 Sum_probs=150.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcch----HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH---h
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGI----KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL---I 211 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~----~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l---~ 211 (434)
.+|+.+++++.+.+..........|....+. .++|+.+++++ | +++++|++++|+++++..++..+ .
T Consensus 28 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~----~--~~~~~v~~~~~~t~~l~~~~~~~~~~~ 101 (397)
T TIGR01976 28 QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL----N--ADPPEVVFGANATSLTFLLSRAISRRW 101 (397)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc----C--CCCCeEEEeCCHHHHHHHHHHHHHhcC
Confidence 4688899998888865422112346555454 46666666665 4 34557999999999998877776 4
Q ss_pred cCCCCEEEEcCCCChhHH----HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCC
Q 013892 212 RSENDGILCPIPQYPLYS----ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (434)
Q Consensus 212 ~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~ 287 (434)
++||+|+++.|.|+... ..++..|++++.++++++ ++.+|++++++++++ ++++|++++|+||||.++
T Consensus 102 -~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~ 173 (397)
T TIGR01976 102 -GPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSP------RTRLVAVTAASNTLGSIV 173 (397)
T ss_pred -CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCC------CceEEEEeCCCCCCCccC
Confidence 68999999999987643 456778999999998753 367899999999876 789999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEec
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~ 367 (434)
+ +++|.++|+++|+++|+|+++.. +.. ...+ ..++ .| +++.|++|.| |.|+||+.+
T Consensus 174 ~---~~~i~~~~~~~~~~~ivD~a~~~----~~~-~~~~----~~~~---~d---~~~~s~~K~~----g~~~G~l~~-- 229 (397)
T TIGR01976 174 D---LAAITELVHAAGALVVVDAVHYA----PHG-LIDV----QATG---AD---FLTCSAYKFF----GPHMGILWG-- 229 (397)
T ss_pred C---HHHHHHHHHHcCCEEEEehhhhc----ccc-CCCH----HHcC---CC---EEEEechhhc----CCceEEEEE--
Confidence 8 89999999999999999999743 111 1111 1111 33 5568999976 457999987
Q ss_pred CCHHHHHHHHHH
Q 013892 368 FSAEVREQIYKV 379 (434)
Q Consensus 368 ~~~~~~~~l~~~ 379 (434)
++++++.+...
T Consensus 230 -~~~~~~~l~~~ 240 (397)
T TIGR01976 230 -RPELLMNLPPY 240 (397)
T ss_pred -cHHHHhhCCCc
Confidence 88888777543
No 144
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.89 E-value=3.2e-21 Score=192.02 Aligned_cols=219 Identities=17% Similarity=0.167 Sum_probs=165.4
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhH----HHHHHHc
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALH 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~----~~~~~~~ 235 (434)
...|+.+. ..+|++.+|++. | . +..++++|+++++..++. ++ .+||+|+++.|.|+.. ...++..
T Consensus 46 y~r~~~pt-~~~le~~la~l~----g--~--~~~~~~~sG~~ai~~~~~-ll-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 114 (366)
T PRK08247 46 YSRTGNPT-RGVLEQAIADLE----G--G--DQGFACSSGMAAIQLVMS-LF-RSGDELIVSSDLYGGTYRLFEEHWKKW 114 (366)
T ss_pred ccCCCCch-HHHHHHHHHHHh----C--C--CcEEEEcCHHHHHHHHHH-Hh-CCCCEEEEecCCcCcHHHHHHHHhhcc
Confidence 44555554 778888988886 3 2 235777778899998764 55 6999999999999864 4445568
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
|++++.++. .|++.+++++++ ++++|++++|+||+|. ..++++|+++|+++|+++|+|++|...
T Consensus 115 G~~v~~vd~-------~d~~~l~~~i~~------~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~ 178 (366)
T PRK08247 115 NVRFVYVNT-------ASLKAIEQAITP------NTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTP 178 (366)
T ss_pred CceEEEECC-------CCHHHHHHhccc------CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCccc
Confidence 999988864 378999998876 7999999999999865 466999999999999999999999643
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~ 394 (434)
.+... + . .+ ..|+++|+||.++|..++++||++. .++++++.+...+. ...+.+++.|+++
T Consensus 179 ~~~~p-----~----~-~g------~di~i~S~sK~~~g~~d~~~G~iv~--~~~~l~~~~~~~~~~~g~~~s~~~a~l~ 240 (366)
T PRK08247 179 VLQRP-----L----E-EG------ADIVIHSATKYLGGHNDVLAGLVVA--KGQELCERLAYYQNAAGAVLSPFDSWLL 240 (366)
T ss_pred cccCc-----h----h-cC------CcEEEeecceeccCCCceeeeEEec--ChHHHHHHHHHHHHhcCCCCChHHHHHH
Confidence 22211 0 0 11 2389999999997656789999875 24778888876665 4456677777777
Q ss_pred HHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
...++ .+...+++++++++.+.+.|+++.
T Consensus 241 ~~~l~---tl~~r~~~~~~~a~~l~~~L~~~p 269 (366)
T PRK08247 241 IRGMK---TLALRMRQHEENAKAIAAFLNEQP 269 (366)
T ss_pred HhccC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 66554 455677788999999999998763
No 145
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=6.9e-21 Score=189.94 Aligned_cols=220 Identities=14% Similarity=0.136 Sum_probs=170.2
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHc
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALH 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~----~~~~ 235 (434)
...|+.+. ...|++.+|++. | .+++++|+|+++++..++.+++ ++||.|+++.|+|...... ....
T Consensus 47 Y~R~~npt-~~~Le~~lA~le----g----~e~ivvt~gg~~Ai~~~l~all-~~Gd~Il~~~~~y~~~~~~~~~~~~~~ 116 (388)
T PRK08861 47 YTRSGNPN-RGLLEQTLSELE----S----GKGAVVTNCGTSALNLWVSALL-GPDDLIVAPHDCYGGTYRLFNTRANKG 116 (388)
T ss_pred ccCCCCch-HHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHHc-CCCCEEEEcCCchHHHHHHHHHHHhcC
Confidence 44555544 788999999986 2 5799999999999999999988 7999999999999864433 2334
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
|.+++.++ ..|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 117 gi~v~~vd-------~~d~e~l~~~i~~------~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~ 180 (388)
T PRK08861 117 DFKVQFVD-------QSDAAALDAALAK------KPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTP 180 (388)
T ss_pred CeEEEEEC-------CCCHHHHHHhcCc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccc
Confidence 67777764 2478999988876 7999999999999999999 778899999999999999999875
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~ 394 (434)
.+... . .++ -| ++++|++|.++|..+.++|++++ .++++.+.+...+. ...+.+++..++
T Consensus 181 ~~~~p--l--------~~G---aD---ivv~S~tK~l~G~~d~~gG~i~~--~~~~~~~~~~~~~~~~G~~~~p~~a~l- 241 (388)
T PRK08861 181 VLQKP--L--------ELG---AD---FVIHSTTKYINGHSDVIGGVLIT--KTKEHAEELAWWGNCIGATGTPFDSYM- 241 (388)
T ss_pred ccCCC--c--------ccC---CC---EEEeecceeccCCCcceeEEEEe--cHHHHHHHHHHHHhccCCCCChHHHHH-
Confidence 44321 1 111 23 88999999997656689999865 35677777776655 455566666554
Q ss_pred HHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+++.-+.+.-+.++..++...+.+.|+.+.
T Consensus 242 --~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p 271 (388)
T PRK08861 242 --TLRGIRTLGARMRVHEESAQQILAYLQTQS 271 (388)
T ss_pred --HHhcCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 444445667788899999999999998775
No 146
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.88 E-value=1.2e-20 Score=189.55 Aligned_cols=211 Identities=12% Similarity=0.149 Sum_probs=160.8
Q ss_pred CCCCCHHHHHHHHHHHHcCCCC----CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc
Q 013892 137 QGLFSADSIERAWQILDQIPGR----ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (434)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~----~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~ 212 (434)
..++++.+++++.+........ ....+.....+.++++.+|+++ | .+++++++|+++++..++..++
T Consensus 29 ~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~----g----~~~~~~~~g~t~a~~~al~~l~- 99 (387)
T PRK09331 29 GGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL----G----MDEARVTHGAREGKFAVMHSLC- 99 (387)
T ss_pred CCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHhc-
Confidence 3467888999988877543210 1122223335788889999987 3 2468899999999999999998
Q ss_pred CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh-cCCCeeEEEEecCCCCCccCCCHHH
Q 013892 213 SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA-KGITVRALVVINPGNPTGQVLAEEN 291 (434)
Q Consensus 213 ~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~-~g~~~~~i~l~~p~NPtG~~~~~~~ 291 (434)
.+||+|+++.++|......++..|++++.++.+.+.++.+|++.+++++++..+ .+.++++|++++|+||||...+
T Consensus 100 ~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~--- 176 (387)
T PRK09331 100 KKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD--- 176 (387)
T ss_pred CCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---
Confidence 799999999999988877889999999999984334578999999999975321 2236899999999999999887
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~ 371 (434)
+++|+++|+++|+++|+|++|...... .+.. .++ .| +++.|++|.+ + .+.++||+++ +++
T Consensus 177 l~~I~~la~~~g~~livD~a~~~g~~~-----~~~~----~~g---~D---~~~~s~~K~l-~-~~~~~G~l~~---~~~ 236 (387)
T PRK09331 177 AKKVAKVAHEYGIPFLLNGAYTVGRMP-----VDGK----KLG---AD---FIVGSGHKSM-A-ASAPSGVLAT---TEE 236 (387)
T ss_pred HHHHHHHHHHcCCEEEEECCcccCCcC-----CCHH----HcC---CC---EEEeeCcccc-c-CCCCEEEEEE---CHH
Confidence 999999999999999999999853221 1111 111 23 7789999998 4 4668999977 888
Q ss_pred HHHHHHHH
Q 013892 372 VREQIYKV 379 (434)
Q Consensus 372 ~~~~l~~~ 379 (434)
+++.+.+.
T Consensus 237 ~i~~~~~~ 244 (387)
T PRK09331 237 YADKVFRT 244 (387)
T ss_pred HHhhcccc
Confidence 88877553
No 147
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=7.9e-21 Score=190.98 Aligned_cols=219 Identities=17% Similarity=0.236 Sum_probs=162.5
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHcC
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHG 236 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~----~~~~~~~~g 236 (434)
..|+.+. ...|++.+|++. | .++.++ ++++++++.+++.+++ .+||.|+++.|+|.. +...++..|
T Consensus 55 ~R~~~p~-~~~Le~~lA~l~----g---~~~~v~-~~sG~~Ai~~~l~all-~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g 124 (405)
T PRK08776 55 TRSGNPT-RDLLGEALAELE----G---GAGGVI-TATGMGAINLVLNALL-QPGDTLVVPHDAYGGSWRLFNALAKKGH 124 (405)
T ss_pred cCCCChH-HHHHHHHHHHHh----C---CCceEE-EcCHHHHHHHHHHHHh-CCCCEEEEccCCchHHHHHHHHHHHhcC
Confidence 3344333 456777777764 4 234555 4445799999999998 799999999999987 444455668
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
.+++.++. .|++.|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....
T Consensus 125 ~~v~~v~~-------~d~~~l~~~i~~------~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~ 188 (405)
T PRK08776 125 FALITADL-------TDPRSLADALAQ------SPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPA 188 (405)
T ss_pred cEEEEECC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccc
Confidence 88887764 378899888875 7999999999999999976 8999999999999999999997632
Q ss_pred cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHH
Q 013892 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILAS 395 (434)
Q Consensus 317 ~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~ 395 (434)
.. .++ .++ .| ++++|.+|.|+|..++.+|+++. .++++.+++..... ...+.+++.++++.
T Consensus 189 ~~-----~pl-----~~g---aD---ivv~S~tK~l~g~~~~~~G~vv~--~~~~l~~~l~~~~~~~g~~~s~~~a~l~~ 250 (405)
T PRK08776 189 LQ-----KPL-----EFG---AD---LVLHSTTKYINGHSDVVGGAVVA--RDAELHQQLVWWANALGLTGSPFDAFLTL 250 (405)
T ss_pred cC-----Ccc-----ccc---CC---EEEecCceeecCCCCceEEEEEe--CCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 11 111 111 23 88999999996655688999864 46788888876554 44567777777666
Q ss_pred HHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 396 LVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 396 ~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
..+ ++++...++..++...+.+.|+++.
T Consensus 251 ~gl---~tl~~r~~~~~~na~~la~~L~~~p 278 (405)
T PRK08776 251 RGL---RTLDARLRVHQENADAIAALLDGHA 278 (405)
T ss_pred hhh---CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 444 5567788888889999999888764
No 148
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.88 E-value=4.6e-21 Score=193.52 Aligned_cols=255 Identities=13% Similarity=0.041 Sum_probs=176.9
Q ss_pred CCCHHHHHHHHHHHHcC---CCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC
Q 013892 139 LFSADSIERAWQILDQI---PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~---~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g 215 (434)
.+++.|.+++.+.+... +..+...|....+.+.+++.+++++.+.+|.+ ..+|++++ +++++..++..++ ++|
T Consensus 30 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~~s-gt~a~~~~l~~l~-~~G 105 (402)
T cd00378 30 FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQPHS-GSQANLAVYFALL-EPG 105 (402)
T ss_pred cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeecCC-cHHHHHHHHHHhc-CCC
Confidence 45888888887655321 11123456677778888888887777777743 34555554 5799999999998 799
Q ss_pred CEEEEcCCCChhHHHH-----HHHcCCeEEEEecCCC-CCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH
Q 013892 216 DGILCPIPQYPLYSAS-----IALHGGTLVPYYLDEA-TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (434)
Q Consensus 216 d~Vlv~~p~y~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~ 289 (434)
|+|+++.|+|+.+... ++..|++++.++++.+ +++.+|++++++.++.. ++++|++++|+||+ ..+
T Consensus 106 d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~-----~~~~v~~~~~~~~~--~~~- 177 (402)
T cd00378 106 DTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEF-----KPKLIVAGASAYPR--PID- 177 (402)
T ss_pred CEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhC-----CCCEEEecCcccCC--CcC-
Confidence 9999999999876443 6667888887777654 26799999999998642 68899999998874 334
Q ss_pred HHHHHHHHHHHHcCCEEEEccCC-CCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecC
Q 013892 290 ENQRAIVDFCKKEGLVLLADEVY-QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (434)
Q Consensus 290 ~~l~~i~~~~~~~~~~li~Deay-~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~ 368 (434)
+++|+++|+++|+++|+|++| .++.+.+. .... +. ..| +++.|+||.| +|+|+||++. .
T Consensus 178 --~~~I~~l~~~~~~~li~D~a~~~g~~~~g~--~~~~------~~--~~d---v~~~s~sK~l---~G~~gg~i~~--~ 237 (402)
T cd00378 178 --FKRFREIADEVGAYLLVDMAHVAGLVAGGV--FPNP------LP--GAD---VVTTTTHKTL---RGPRGGLILT--R 237 (402)
T ss_pred --HHHHHHHHHhcCCEEEEEccchhhhhhccc--CCCc------cc--CCc---EEEeccccCC---CCCCceEEEe--c
Confidence 889999999999999999995 55544432 1110 11 123 6799999987 5999999976 2
Q ss_pred CHHHHHHHHHHhh-cccCCc-hHHHHHHHHHcC-CCC-CChHHHHHHHHHHHHHHHHHHHH
Q 013892 369 SAEVREQIYKVAS-VNLCSN-ISGQILASLVMS-PPK-VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 369 ~~~~~~~l~~~~~-~~~~~~-~~~q~~~~~~l~-~~~-~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++++++.+.+... ...+.+ ...+.++...+. ... ..++.++++.++++.+.+.|+++
T Consensus 238 ~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 298 (402)
T cd00378 238 KGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER 298 (402)
T ss_pred cHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4488888876654 222222 222222222222 111 34567788888888888888775
No 149
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=9.4e-21 Score=190.14 Aligned_cols=210 Identities=13% Similarity=0.129 Sum_probs=159.1
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~~ 244 (434)
..+|++.+|+++ | .++.++++++++++..++..++ .+||.|+++.|+|..... .+...|++++.++
T Consensus 66 ~~~le~~lA~l~----g----~~~~i~~ssG~~Ai~~~l~all-~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd- 135 (398)
T PRK08249 66 VQAFEEKVRILE----G----AEAATAFSTGMAAISNTLYTFL-KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE- 135 (398)
T ss_pred HHHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC-
Confidence 678899999987 3 2456677777899999998888 799999999999987543 3556788887764
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
..|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|....... +
T Consensus 136 ------~~d~e~l~~~i~~------~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~--~-- 196 (398)
T PRK08249 136 ------TGDHEQIEAEIAK------GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN--P-- 196 (398)
T ss_pred ------CCCHHHHHHhcCC------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC--c--
Confidence 3589999999876 7999999999999999999 8889999999999999999999644321 1
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee-EEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCC
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPK 402 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~ 402 (434)
. ..+ .| ++++|+||.++ -+|.++ ||++. ++++++.+...+. ...+.+...++++.. ..+
T Consensus 197 -l-----~~~---~D---ivv~S~sK~l~-g~~~~~gG~vv~---~~~l~~~l~~~~~~~g~~~s~~~a~l~l~---~l~ 257 (398)
T PRK08249 197 -L-----ALG---AD---LVIHSATKFLS-GHADALGGVVCG---SKELMEQVYHYREINGATMDPMSAYLILR---GMK 257 (398)
T ss_pred -h-----hhC---CC---EEeccCceecC-CCCCceEEEEEC---CHHHHHHHHHHHHhcCCCCCHHHHHHHHh---Ccc
Confidence 1 111 23 77899999994 467665 55543 8889998887766 444556665555443 444
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.+....++..+++..+.+.|+++.
T Consensus 258 tL~~R~~~~~~na~~la~~L~~~p 281 (398)
T PRK08249 258 TLKLRVRQQQESAMALAKYLQTHP 281 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCC
Confidence 556777888888888888887653
No 150
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.87 E-value=1.1e-20 Score=189.44 Aligned_cols=218 Identities=15% Similarity=0.162 Sum_probs=159.6
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhH----HHHHHHc
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALH 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~----~~~~~~~ 235 (434)
...|+.+. ..+|++.+|++. | .+..+++++++.++..++..++ .+||.|+++.|.|... ...+...
T Consensus 53 y~r~~~p~-~~~le~~lA~l~----g----~~~av~~~sG~~Ai~~~l~al~-~~Gd~Vi~~~~~y~~t~~~~~~~~~~~ 122 (391)
T TIGR01328 53 YSRLGNPT-VSNLEGRIAFLE----G----TEAAVATSSGMGAIAATLLTIL-KAGDHLISDECLYGCTFALLEHALTKF 122 (391)
T ss_pred eeCCCCch-HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEecCcchHHHHHHHHHHhcC
Confidence 34455443 678999999987 2 2346777777889999998888 7999999999988653 3445567
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
|++++.++++ |++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...
T Consensus 123 G~~~~~vd~~-------d~e~l~~~i~~------~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~ 186 (391)
T TIGR01328 123 GIQVDFINMA-------IPEEVKAHIKD------NTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATP 186 (391)
T ss_pred CeEEEEECCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchh
Confidence 9988888754 68899998876 7999999999999999998 888999999999999999999864
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce-eEEEEEecCCHHHHHHHHHHhh--c-ccCCchHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSAEVREQIYKVAS--V-NLCSNISGQ 391 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R-~G~~~~~~~~~~~~~~l~~~~~--~-~~~~~~~~q 391 (434)
.+... + .. ..| |+++|+||.+ |.+|.+ +|+++. ++++++.+..... . ..+.+....
T Consensus 187 ~~~~~-----~-----~~---g~D---ivv~S~sK~l-gg~g~~~gG~v~~---~~~li~~l~~~~~~~~~g~~l~~~~a 246 (391)
T TIGR01328 187 MLTNP-----V-----AL---GVD---VVVHSATKYI-GGHGDVVAGLICG---KAELLQQIRMVGIKDMTGSVISPFDA 246 (391)
T ss_pred ccCCc-----h-----hc---CCC---EEEccccccc-cCCCCceEEEEEc---CHHHHHHHHHHHHHhCCCCCCCcHHH
Confidence 33211 0 11 123 7889999999 668876 566654 8888888876432 2 223444444
Q ss_pred HHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 392 ILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 392 ~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+++.. .-+.+...+++..++...+.+.|+++.
T Consensus 247 ~l~l~---~L~tl~~r~~~~~~na~~la~~L~~~p 278 (391)
T TIGR01328 247 WLILR---GLKTLNIRMKRHSENAMKVAEYLKSHP 278 (391)
T ss_pred HHHHh---CcCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 44433 334455667777888888888887653
No 151
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=1.3e-20 Score=189.10 Aligned_cols=220 Identities=16% Similarity=0.121 Sum_probs=164.9
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHc
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALH 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~----~~~~~ 235 (434)
+..|+.+. ..+|++.++++. | .+++++++|+++|+..++.+++ ++||+|+++.|+|..+.. .+...
T Consensus 59 Y~r~~~pt-~~~Le~~lA~l~----g----~~~~l~~~sgt~Ai~~~l~al~-~~GD~Vl~~~~~y~~~~~~~~~~~~~~ 128 (394)
T PRK07050 59 YGLHATPT-SLALAQRLAEIE----G----GRHALLQPSGLAAISLVYFGLV-KAGDDVLIPDNAYGPNRDHGEWLARDF 128 (394)
T ss_pred cCCCCCHH-HHHHHHHHHHHh----C----CCeEEEeccHHHHHHHHHHHHh-CCCCEEEEecCCcccHHHHHHHHHHhc
Confidence 44454333 677777777775 3 4689999999999999999998 799999999999998664 45667
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
|++++.++.. +.+.+++++++ ++|+|++++|+||+|.+ .++++|+++|+++|+++|+|++|...
T Consensus 129 Gi~v~~vd~~-------~~~~l~~~i~~------~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~ 192 (394)
T PRK07050 129 GITVRFYDPL-------IGAGIADLIQP------NTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAG 192 (394)
T ss_pred CeEEEEECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCcccc
Confidence 9999887632 34678887765 79999999999999754 55999999999999999999999764
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~ 394 (434)
.+... . .++ . -|+++|++|.++|..|.++|++++ .++++++.+...+. ...+.++...+.+
T Consensus 193 ~~~~~--------l--~~G---a---Di~v~S~tK~~~g~~~~~gG~v~~--~~~~~~~~~~~~~~~~G~~~~~~~a~l~ 254 (394)
T PRK07050 193 LAFKP--------F--EHG---V---DISVQALTKYQSGGSDVLMGATIT--ADAELHAKLKLARMRLGIGVSADDCSLV 254 (394)
T ss_pred cccCH--------H--HcC---C---eEEEEECCceecCCCCeeEEEEEE--CCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 33211 1 111 1 288999999997666778999864 37888888876665 4556666665554
Q ss_pred HHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
...+ +.+....++..++...+.+.|+++.
T Consensus 255 lr~l---~tl~~Rl~~~~~~a~~la~~L~~~p 283 (394)
T PRK07050 255 LRGL---PSLQVRLAAHDRSALEVAEWLKARP 283 (394)
T ss_pred HcCC---CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4433 3445667777777778888888764
No 152
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.87 E-value=2.8e-20 Score=187.84 Aligned_cols=200 Identities=18% Similarity=0.195 Sum_probs=149.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCC-CCCCC----CCcchHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHHh-
Q 013892 139 LFSADSIERAWQILDQIPGRA-TGAYS----HSQGIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLI- 211 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~-~~~Y~----~~~G~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~l~~l~- 211 (434)
.+|+.+++++.+.+.+..... ...|. ...++.++|+.+++++ | .+ +++|++|+|+++++.+++..+.
T Consensus 29 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----~--~~~~~~v~~~~g~t~~l~~~~~~~~~ 102 (403)
T TIGR01979 29 QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI----N--AASDEEIVFTRGTTESINLVAYSWGD 102 (403)
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----C--cCCCCeEEEeCCHHHHHHHHHHHhhh
Confidence 467888888888776532100 11111 1124668888898887 3 34 6799999999999999988751
Q ss_pred --cCCCCEEEEcCCCChhH----HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 212 --RSENDGILCPIPQYPLY----SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 212 --~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
.++||+|+++++.|+.. ...++..|++++.++.++ ++.+|++.+++++++ ++++|++++|+||||.
T Consensus 103 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~------~~~lv~~~~~~~~tG~ 174 (403)
T TIGR01979 103 SNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDD--DGTLDLDDLEKLLTE------KTKLVAITHVSNVLGT 174 (403)
T ss_pred hcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCC--CCCCCHHHHHHHhcc------CCeEEEEEcccccccc
Confidence 16899999999987753 345567899999999874 357899999999976 7999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+++ +++|.++|+++|+++|+|++|...... ..+ ..++ .+ +++.|++|.+ |.+| +||+.+
T Consensus 175 ~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~~-----~~~----~~~~---~d---~~~~s~~K~~-gp~G--~g~l~~ 233 (403)
T TIGR01979 175 VNP---VEEIAKLAHQVGAKVLVDGAQAVPHMP-----VDV----QALD---CD---FYVFSGHKMY-GPTG--IGVLYG 233 (403)
T ss_pred cCC---HHHHHHHHHHcCCEEEEEchhhcCccc-----cCc----cccC---CC---EEEEeccccc-CCCC--ceEEEE
Confidence 999 889999999999999999999753211 111 1111 23 7888999977 7666 888876
Q ss_pred ecCCHHHHHHH
Q 013892 366 TGFSAEVREQI 376 (434)
Q Consensus 366 ~~~~~~~~~~l 376 (434)
++++++.+
T Consensus 234 ---~~~~~~~~ 241 (403)
T TIGR01979 234 ---KEELLEQM 241 (403)
T ss_pred ---chHHHhcC
Confidence 77777665
No 153
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.87 E-value=1.7e-20 Score=188.84 Aligned_cols=217 Identities=16% Similarity=0.190 Sum_probs=160.4
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhH----HHHHHHcC
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALHG 236 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~----~~~~~~~g 236 (434)
..|+.+. ..+|++.+++++ | .+..+++++++.++.+++..++ ++||+|+++.|.|... ...+...|
T Consensus 60 ~r~~~p~-~~~le~~lA~l~----g----~~~~i~~~sG~~Al~~~l~~ll-~~Gd~Viv~~~~y~~t~~~~~~~~~~~G 129 (403)
T PRK07503 60 SRISNPT-LALLEQRMASLE----G----GEAAVALASGMGAITATLWTLL-RPGDEVIVDQTLYGCTFAFLHHGLGEFG 129 (403)
T ss_pred eCCCCch-HHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHc-CCCCEEEEccCccchHHHHHHHHHhhCC
Confidence 3444433 788999999886 3 2335666677889999998887 7999999999988753 33456689
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
++++.++.+ |++.+++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....
T Consensus 130 ~~v~~vd~~-------d~~~l~~~i~~------~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~ 193 (403)
T PRK07503 130 VTVRHVDLT-------DPAALKAAISD------KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPY 193 (403)
T ss_pred EEEEEeCCC-------CHHHHHHhcCc------cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccc
Confidence 998888753 68899998876 7999999999999999988 8899999999999999999998643
Q ss_pred cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHH--hh-cccCCchHHHH
Q 013892 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV--AS-VNLCSNISGQI 392 (434)
Q Consensus 317 ~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--~~-~~~~~~~~~q~ 392 (434)
... + + .++ .+ |+++|+||.++ .+| .|+||++. ++++++++... .. ...+.+.+.++
T Consensus 194 ~~~--~---l-----~~g---~D---i~v~S~tK~l~-g~gd~~gG~v~~---~~~l~~~l~~~~~~~~~g~~~s~~~a~ 253 (403)
T PRK07503 194 LQR--P---L-----ELG---AD---LVVHSATKYLG-GHGDITAGLVVG---GKALADRIRLEGLKDMTGAVMSPFDAF 253 (403)
T ss_pred cCC--c---h-----hhC---CC---EEEcccccccc-CCCceeEEEEEc---CHHHHHHHHhhhHHhCcCCCCCHHHHH
Confidence 321 1 1 111 23 88999999994 455 78898865 88888888643 33 34566666665
Q ss_pred HHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 393 LASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 393 ~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++..-| +.+....++..++...+.+.|+++.
T Consensus 254 l~l~~L---~tl~~r~~~~~~na~~~a~~L~~~p 284 (403)
T PRK07503 254 LLMRGL---KTLALRMDRHCASAQAVAEWLARHP 284 (403)
T ss_pred HHHcCc---chHHHHHHHHHHHHHHHHHHHHhCC
Confidence 554444 4455666777777778888877653
No 154
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.87 E-value=4.8e-20 Score=185.27 Aligned_cols=219 Identities=15% Similarity=0.167 Sum_probs=157.4
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHc
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALH 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~ 235 (434)
...|+.+. ..+|++.+|+++ | . +..+++++++.++..++..++ ++||+|+++.|.|+.+...+ ...
T Consensus 59 y~r~~~p~-~~~Le~~lA~l~----G--~--~~~~~~~sG~~Ai~~~l~~~l-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~ 128 (398)
T PRK07504 59 YSRYSNPT-VDMFEKRMCALE----G--A--EDARATASGMAAVTAAILCQV-KAGDHVVAARALFGSCRYVVETLLPRY 128 (398)
T ss_pred eecCCCch-HHHHHHHHHHHh----C--C--CeeeEecCHHHHHHHHHHHHh-CCCCEEEEcCCchhHHHHHHHHHHhhc
Confidence 34454444 788999999986 3 2 233456677788887777777 79999999999999765443 456
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
|++++.++ .+|++.+++++++ ++|+|++++|+||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 129 G~~v~~vd-------~~d~e~l~~ai~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~ 192 (398)
T PRK07504 129 GIESTLVD-------GLDLDNWEKAVRP------NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATP 192 (398)
T ss_pred CeEEEEEC-------CCCHHHHHHhcCc------CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCcccc
Confidence 88888874 4689999999876 7999999999999999999 889999999999999999999865
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHH-HHHHHhh-cccCCchHHHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE-QIYKVAS-VNLCSNISGQIL 393 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~-~l~~~~~-~~~~~~~~~q~~ 393 (434)
.+... . .++ .+ ++++|+||.| +.+|+|+|++++ + ++++++ .+..... ...+.+.+.+
T Consensus 193 ~~~~~-----~-----~~g---aD---ivv~S~sK~l-~g~g~~~GG~vv-~-~~~~i~~~~~~~~~~~g~~~s~~~A-- 251 (398)
T PRK07504 193 LFQKP-----L-----ELG---AH---IVVYSATKHI-DGQGRCLGGVVL-S-DKAWIEEHLQDYFRHTGPSLSPFNA-- 251 (398)
T ss_pred ccCCc-----h-----hhC---CC---EEEeeccccc-cCCccceEEEEE-e-CcHHHHHHHHHHHHHhCCCCCHHHH--
Confidence 44211 0 111 23 7899999999 568999875543 2 555554 3443322 3334444444
Q ss_pred HHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 394 ASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 394 ~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
..++..-+.+....++..++...+.+.|+++.
T Consensus 252 -~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p 283 (398)
T PRK07504 252 -WTLLKGLETLPVRVRQQTESAAAIADFLAGHP 283 (398)
T ss_pred -HHHHhccchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 44444445567777788888888888887654
No 155
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=5.2e-20 Score=184.50 Aligned_cols=215 Identities=16% Similarity=0.183 Sum_probs=157.1
Q ss_pred CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH----HcCCeEEE
Q 013892 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LHGGTLVP 241 (434)
Q Consensus 166 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~ 241 (434)
.....+|++.+|++... ...+++ +++++++..++.+++ ++||+|+++.|+|+.....+. ..|+++..
T Consensus 60 ~p~~~~Le~~lA~~~g~-------~~~i~~-~sG~~Ai~~~l~all-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~ 130 (388)
T PRK07811 60 NPTRTALEEQLAALEGG-------AYGRAF-SSGMAATDCLLRAVL-RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTP 130 (388)
T ss_pred CccHHHHHHHHHHHhCC-------CceEEe-CCHHHHHHHHHHHHh-CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence 35588999999999732 123444 556899999999998 799999999999996444333 25777776
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCC
Q 013892 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK 321 (434)
Q Consensus 242 ~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 321 (434)
++. .|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+..
T Consensus 131 ~d~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~-- 192 (388)
T PRK07811 131 VDL-------SDLDAVRAAITP------RTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQQ-- 192 (388)
T ss_pred eCC-------CCHHHHHHhcCc------CCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccCC--
Confidence 653 378999998876 7999999999999999876 8999999999999999999998743321
Q ss_pred CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC
Q 013892 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP 400 (434)
Q Consensus 322 ~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~ 400 (434)
+ + .++ .| |+++|++|.++|..+.++||+++ .++++.+.+...+. ...+.++..++++...|
T Consensus 193 p---~-----~~g---aD---ivv~S~sK~l~g~~~~~gG~vv~--~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L-- 254 (388)
T PRK07811 193 P---L-----ALG---AD---VVVHSTTKYIGGHSDVVGGALVT--NDEELDEAFAFLQNGAGAVPGPFDAYLTLRGL-- 254 (388)
T ss_pred c---h-----hhC---Cc---EEEecCceeecCCCCcEEEEEEE--CCHHHHHHHHHHHHhcCCCCCHHHHHHHHhcc--
Confidence 1 1 111 23 88999999995433468999875 36777777766554 34445555544444444
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 401 PKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 401 ~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+.+...+++..++...+.+.|+++.
T Consensus 255 -~tl~~R~~~~~~na~~la~~L~~~p 279 (388)
T PRK07811 255 -KTLAVRMDRHSENAEAVAEFLAGHP 279 (388)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3456677777888888888887654
No 156
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.87 E-value=8.9e-20 Score=181.34 Aligned_cols=233 Identities=17% Similarity=0.172 Sum_probs=171.1
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC--
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND-- 216 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd-- 216 (434)
.+|+++++++.+..++ |. +..++++++++++.+.+| .+++++|+|+++++.+++.+++ ++||
T Consensus 24 ~~~~~v~~a~~~~~~~--------~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al~~al~al~-~~Gd~~ 87 (363)
T TIGR01437 24 TVSDEVADAQKRGAQN--------YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGIAQSVAAVI-TRGNRY 87 (363)
T ss_pred CCCHHHHHHHHHHHhc--------CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHHHHHHHHHh-cCCCcc
Confidence 3589999999888653 22 356788888888888777 3478999999999999999998 6888
Q ss_pred -------------EEEEcCCCChhH----HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE-Eec
Q 013892 217 -------------GILCPIPQYPLY----SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV-VIN 278 (434)
Q Consensus 217 -------------~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~-l~~ 278 (434)
+|+++.|.|..| ...+...|++++.++.+ +.+|++++++++++ ++++++ +++
T Consensus 88 ~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~------~t~ai~~v~~ 157 (363)
T TIGR01437 88 LVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITE------KTAAILYIKS 157 (363)
T ss_pred hhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcCh------hceEEEEEec
Confidence 999999888866 56778899999998763 47999999999987 788776 568
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCc
Q 013892 279 PGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (434)
Q Consensus 279 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~ 358 (434)
|+||+|.+.+ +++|+++|+++|+++|+|++|... .. ... .++ .| +++.|++|.| +|+
T Consensus 158 ~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~-------~~---~~~-~~g---~D---~~~~S~~K~l---~gp 214 (363)
T TIGR01437 158 HHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEED-------LQ---KYY-RLG---AD---LVIYSGAKAI---EGP 214 (363)
T ss_pred CCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCc-------hH---HHH-HcC---CC---EEEEeCCccc---CCC
Confidence 8999999999 788999999999999999999721 11 111 111 23 6778999977 488
Q ss_pred eeEEEEEecCCHHHHHHHHHHhhc------ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 359 RGGYMEVTGFSAEVREQIYKVASV------NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 359 R~G~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++|+++. ++++++.+...... ....+..+..++...+. +...+..+.+.++++.+.+.|++.
T Consensus 215 ~~G~l~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~--~~~~~~~~~~~~~~~~l~~~L~~i 282 (363)
T TIGR01437 215 TSGLVLG---KKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYL--STGKESGAEMVAKLTPFIEALNTL 282 (363)
T ss_pred ceEEEEE---cHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHH--ccCcccHHHHHHHHHHHHHHHhcC
Confidence 9999876 77888876443211 11122234444333332 223455666667777888888764
No 157
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.87 E-value=1.8e-20 Score=188.95 Aligned_cols=260 Identities=12% Similarity=0.074 Sum_probs=178.9
Q ss_pred CCCccccccc----CCCC-CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET----QGLF-SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~----~~~~-p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+|||..+ ..+. ++.+.+++.+.+++... ....|....+ . ++++++.+.++. .+++++++++|+++
T Consensus 42 g~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~-~~~~~~~~~~-~----~la~~l~~~~~~-~~~~~v~~~~sgse 114 (398)
T PRK03244 42 GKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGH-VSNLFATEPQ-I----ALAERLVELLGA-PEGGRVFFCNSGAE 114 (398)
T ss_pred CCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccC-ccCccCCHHH-H----HHHHHHHHhCCC-CCCCEEEEeCchHH
Confidence 3445666553 2333 68899999998887432 2345655442 3 444444444452 24579999999999
Q ss_pred HHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHc-CCe------------EEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 202 AVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALH-GGT------------LVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 202 al~~~l~~l~~~~g-d~Vlv~~p~y~~~~~~~~~~-g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
++..+++.+. .+| +.|+..+++|+.+....... |.. +..++. .|++.+++.+++
T Consensus 115 a~~~al~~~~-~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~---- 182 (398)
T PRK03244 115 ANEAAFKLAR-LTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDD---- 182 (398)
T ss_pred HHHHHHHHHH-HHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcC----
Confidence 9999999776 355 57888888998775544332 221 122211 378889888754
Q ss_pred CCCeeEEEEecCCCCCccCCCHHH-HHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 268 GITVRALVVINPGNPTGQVLAEEN-QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
++++|+++.++||||.+++.++ +++|.++|++||+++|+||+|.++.+.+. ...+ . ... ..+| + .
T Consensus 183 --~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~--~~~~-~-~~~---~~pD--i---~ 248 (398)
T PRK03244 183 --DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGA--WFAH-Q-HDG---VTPD--V---V 248 (398)
T ss_pred --CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccch--HHhh-h-hhC---CCCC--E---E
Confidence 7889999988999999997655 99999999999999999999998554432 1111 1 111 2356 2 3
Q ss_pred cCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH-hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 347 SVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 347 S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+|||++ | +|+|+||+++ ++++++.+... ...+.+.+++++.++...|+.-+. ++..++.++.++.+.+.|++.
T Consensus 249 t~sK~l-~-~G~~ig~~~~---~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~~ 322 (398)
T PRK03244 249 TLAKGL-G-GGLPIGACLA---FGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIAS-EGLLENAERLGEQLRAGIEAL 322 (398)
T ss_pred EEchhh-h-CCcccEEEEE---cHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhc
Confidence 789999 5 7999999988 88888887653 224557888999988888652211 245677777888888888764
No 158
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.87 E-value=3.7e-20 Score=187.22 Aligned_cols=248 Identities=14% Similarity=0.110 Sum_probs=170.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCC-CCCCCC----CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH---
Q 013892 139 LFSADSIERAWQILDQIPGRA-TGAYSH----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL--- 210 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~-~~~Y~~----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l--- 210 (434)
+.|..|++++.+.+....... ...|.. ..-..++|+.+|+++ |. .++++|++|+|+++++..++..+
T Consensus 34 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~-~~~~~v~~t~g~t~~l~~~~~~~~~~ 108 (406)
T PRK09295 34 QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI----NA-RSAEELVFVRGTTEGINLVANSWGNS 108 (406)
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc----Cc-CCCCeEEEeCCHHHHHHHHHHHhhhh
Confidence 567889999888886532100 111210 122557778888876 31 15789999999999999998864
Q ss_pred -hcCCCCEEEEcCCCChh----HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 211 -IRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 211 -~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
+ ++||+|+++++.|++ +...++..|++++.++++.+ +.+|+++|++++++ ++++|++++|+||||.
T Consensus 109 ~~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~------~t~lv~l~~~~n~tG~ 179 (406)
T PRK09295 109 NV-RAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPD--GTLQLETLPALFDE------RTRLLAITHVSNVLGT 179 (406)
T ss_pred cC-CCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC--CCCCHHHHHHhcCC------CcEEEEEecchhcccc
Confidence 3 689999999988764 45566778999999998643 57899999999876 7999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+++ +++|+++|+++|+++++|++|...... ..+ ..++ .| +++.|++|.+ |.+| +||+++
T Consensus 180 ~~~---~~~i~~~~~~~~~~vivD~a~~~g~~~-----~~~----~~~~---~D---~~~~s~~K~~-gp~G--~G~l~~ 238 (406)
T PRK09295 180 ENP---LAEMIALAHQHGAKVLVDGAQAVMHHP-----VDV----QALD---CD---FYVFSGHKLY-GPTG--IGILYV 238 (406)
T ss_pred cCC---HHHHHHHHHHcCCEEEEEcccccCccc-----cCc----hhcC---CC---EEEeehhhcc-CCCC--cEEEEE
Confidence 999 888999999999999999999753221 111 1111 34 7788999966 7666 799987
Q ss_pred ecCCHHHHHHHHHHh----------------------h-cccCCchHHHHHHHHHcCCC-C-CChHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQIYKVA----------------------S-VNLCSNISGQILASLVMSPP-K-VGDESYESYCAERDGILS 420 (434)
Q Consensus 366 ~~~~~~~~~~l~~~~----------------------~-~~~~~~~~~q~~~~~~l~~~-~-~~~~~~~~~~~~r~~l~~ 420 (434)
++++++.+.... . ....++..+..++..+++.- + ..+...++.++.++.+.+
T Consensus 239 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~ 315 (406)
T PRK09295 239 ---KEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALS 315 (406)
T ss_pred ---chHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 777766542110 0 12245555555555555321 1 123444555555566666
Q ss_pred HHHH
Q 013892 421 SLAR 424 (434)
Q Consensus 421 ~L~~ 424 (434)
.|++
T Consensus 316 ~l~~ 319 (406)
T PRK09295 316 QLES 319 (406)
T ss_pred HHhc
Confidence 5544
No 159
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.87 E-value=1.7e-20 Score=188.69 Aligned_cols=253 Identities=13% Similarity=0.103 Sum_probs=172.3
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh---cCCCC
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI---RSEND 216 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~---~~~gd 216 (434)
-+|.+++++.+.+...... ...| ..+....+++.+.+.. ..+++++++|+++|+..+++++. .++||
T Consensus 48 ~~p~v~~a~~~~~~~~~~~-~~~~-----~~~~~~~la~~l~~~~----~~~~v~~~~sGseA~~~al~~ar~~~~~~G~ 117 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHV-SNLY-----RIPEQERLAERLVENS----FADKVFFTNSGAEAVECAIKTARRYHYGKGH 117 (389)
T ss_pred CCHHHHHHHHHHHHhcCcc-cccc-----CChHHHHHHHHHHhhC----CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCC
Confidence 5788999999988763210 1112 1223344555554432 24689999999999999988762 14565
Q ss_pred ----EEEEcCCCChhHHHHHHHcCCeEEEEecC--CCCCCC----CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc-c
Q 013892 217 ----GILCPIPQYPLYSASIALHGGTLVPYYLD--EATGWG----LETSEVKKQLEAAKAKGITVRALVVINPGNPTG-Q 285 (434)
Q Consensus 217 ----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~----~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG-~ 285 (434)
+|++.++.|+++.......+......... ...++. .|++.+++.+++ ++++|+++.++||+| .
T Consensus 118 ~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~avivep~~~~~G~~ 191 (389)
T PRK01278 118 PERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP------NTAAILIEPIQGEGGIR 191 (389)
T ss_pred CCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC------CeEEEEEecccCCCCCc
Confidence 89999999998877666655443322110 011122 589999998865 788999987789999 7
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+++.+.+++|.++|++||+++|+||+|.++.+.+. ..... . .. ..+| +.||||++ + +|+|+||+++
T Consensus 192 ~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~-~-~~---~~pd-----i~t~sK~l-~-~G~~ig~~~~ 257 (389)
T PRK01278 192 PAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK--LFAHE-W-AG---VTPD-----IMAVAKGI-G-GGFPLGACLA 257 (389)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--ceeec-c-cC---CCCC-----EEEEehhc-c-CCcceEEEEE
Confidence 88999999999999999999999999998655443 11110 0 11 1244 24899999 5 7999999987
Q ss_pred ecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 366 ~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++++++.+..... .+.+.+++.|.++...++.-+. ++..+..++.++.+.+.|++..
T Consensus 258 ---~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~l~~l~ 315 (389)
T PRK01278 258 ---TEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILA-PGFLDNVQRMGLYLKQKLEGLV 315 (389)
T ss_pred ---cHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888765443 5557889999988776643110 1345566666666766666543
No 160
>PRK02948 cysteine desulfurase; Provisional
Probab=99.87 E-value=1e-20 Score=189.62 Aligned_cols=251 Identities=16% Similarity=0.160 Sum_probs=173.5
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCCCCC----cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-
Q 013892 138 GLFSADSIERAWQILDQIPGRATGAYSHS----QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR- 212 (434)
Q Consensus 138 ~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~----~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~- 212 (434)
..+|+.+++++.+.+.....+....|... .-+.++|+.+++++ | +++++|++|+|+++++..++..++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~i~~~~g~t~a~~~~~~~~~~~ 83 (381)
T PRK02948 10 TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMI----G--GEEQGIYFTSGGTESNYLAIQSLLNA 83 (381)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCcHHHHHHHHHHHHHHh
Confidence 35688899998888765321111111111 11345666666665 4 4678999999999999998888752
Q ss_pred --CCCCEEEEcCCCChhHH---HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCC
Q 013892 213 --SENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (434)
Q Consensus 213 --~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~ 287 (434)
.+|+.|+++...|+.+. ..++..|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.++
T Consensus 84 ~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~ 155 (381)
T PRK02948 84 LPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITP------DTVLASIQHANSEIGTIQ 155 (381)
T ss_pred ccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCC------CCEEEEEECCcCCcEeeh
Confidence 36899999997776544 45666799999999874 357899999998875 688999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEec
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~ 367 (434)
+ +++|.++|+++|+++++|+++. ++.. +. .+ ..++ .+ +++.|++|.+ |.+| +|++++
T Consensus 156 ~---~~~I~~l~~~~~~~vivD~~~~---~g~~-~~-~~----~~~~---~d---~~~~s~~K~~-gp~G--~G~l~~-- 212 (381)
T PRK02948 156 P---IAEIGALLKKYNVLFHSDCVQT---FGKL-PI-DV----FEMG---ID---SLSVSAHKIY-GPKG--VGAVYI-- 212 (381)
T ss_pred h---HHHHHHHHHHcCCEEEEEChhh---cccc-cc-Cc----ccCC---CC---EEEecHHhcC-CCCc--EEEEEE--
Confidence 8 7889999999999999996544 2221 11 11 1111 22 6788999987 7788 788876
Q ss_pred CCHHH-HHHHHH----Hhh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 368 FSAEV-REQIYK----VAS-VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 368 ~~~~~-~~~l~~----~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++++ ...+.. ... ..+.++.+++.++..+++.. ++.++.+++.++.++.+.+.|+++.
T Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 277 (381)
T PRK02948 213 -NPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLP 277 (381)
T ss_pred -cCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4432 111110 001 23467788888777777542 3456677888888888888887653
No 161
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.87 E-value=5.4e-20 Score=184.05 Aligned_cols=217 Identities=16% Similarity=0.203 Sum_probs=164.4
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHcC
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHG 236 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~----~~~~~~~~g 236 (434)
..|+.+. ..+|++.+++++ | .+.+++++++++++..++.+++ ++||+|+++.+.|.. +...+...|
T Consensus 49 ~r~~~p~-~~~le~~la~l~----g----~~~~~~~~sG~~Ai~~al~al~-~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g 118 (380)
T TIGR01325 49 SRYANPT-VAAFEERIAALE----G----AERAVATATGMSAIQAALMTLL-QAGDHVVASRSLFGSTVGFISEILPRFG 118 (380)
T ss_pred ecCCCch-HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEecCCcchHHHHHHHHHHHhC
Confidence 4455444 788888998876 3 2568889999999999999888 799999999998865 334567789
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
++++.++.+ |++.+++++++ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|....
T Consensus 119 ~~v~~v~~~-------d~~~l~~~i~~------~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~ 182 (380)
T TIGR01325 119 IEVSFVDPT-------DLNAWEAAVKP------NTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPV 182 (380)
T ss_pred CEEEEECCC-------CHHHHHHhcCC------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccc
Confidence 998888753 68888888865 7899999999999999988 8999999999999999999998643
Q ss_pred cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee-EEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHH
Q 013892 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (434)
Q Consensus 317 ~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~ 394 (434)
+... + .++ .| |+++|++|.+ +.+|.++ |+++. ++++++.+..... ...+.++.. +
T Consensus 183 ~~~p-----l-----~~g---~D---ivv~S~sK~l-~g~g~~~gG~vv~---~~~~~~~l~~~~~~~g~~~~p~~---a 239 (380)
T TIGR01325 183 LQQP-----L-----KLG---AD---VVVYSATKHI-DGQGRVMGGVIAG---SEELMAEVAVYLRHTGPAMSPFN---A 239 (380)
T ss_pred cCCc-----h-----hhC---CC---EEEeecccee-cCCCCeEEEEEEe---CHHHHHHHHHHHHhhCCCCCHHH---H
Confidence 3221 1 111 33 7888999999 4478776 66655 7788888876654 332333333 3
Q ss_pred HHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
..++...+.+....++..+++..+.+.|+++.
T Consensus 240 ~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p 271 (380)
T TIGR01325 240 WVLLKGLETLSLRMQKQFDSALAIAEWLQAQP 271 (380)
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 44555556677788888999999999988754
No 162
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.86 E-value=9.6e-20 Score=183.94 Aligned_cols=263 Identities=13% Similarity=0.108 Sum_probs=180.5
Q ss_pred CCccccccc---CCCCCHHHHHHHHHHHHcCCCCCCC----CCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 128 PSILDRSET---QGLFSADSIERAWQILDQIPGRATG----AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 128 p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~----~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
.++++|++| +...+|++++++.+.++..+. ... .|....-..+|++.+++++ | .++.+++++ ++
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~-~~~~s~~~~g~~~~~~~Le~~la~~~----g---~~~~l~~~s-G~ 115 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGA-GAGGTRNISGTNIPHVELEAELADLH----G---KESALVFTS-GY 115 (402)
T ss_pred eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCC-CCcchhhhhCCcHHHHHHHHHHHHHh----C---CCeEEEECc-hH
Confidence 457788888 677889999999999987542 111 1222333566777777776 3 233455555 57
Q ss_pred HHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC
Q 013892 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (434)
Q Consensus 201 ~al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p 279 (434)
+++..++..+.. .+++.|+.....|......++..|+++..++. .|++++++.++.... .++++|++++|
T Consensus 116 ~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~--~~~~~v~~e~~ 186 (402)
T TIGR01821 116 VANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDP--NRPKIIAFESV 186 (402)
T ss_pred HHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccC--CCCeEEEEcCC
Confidence 888788877752 26777777767777777778888887766542 367888888764211 15789999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce
Q 013892 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (434)
Q Consensus 280 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R 359 (434)
+||||.+.+ +++|.++|+++|+++|+||+|....+++.. ..+... ..+. ++ ..|+++||||.| |++|
T Consensus 187 ~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g--~g~~~~-~~~~---~~-~div~~t~sKa~-g~~G-- 253 (402)
T TIGR01821 187 YSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRG--GGIAER-DGLM---HR-IDIIEGTLAKAF-GVVG-- 253 (402)
T ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCC--Cccchh-ccCC---CC-CeEEEEechhhh-ccCC--
Confidence 999999998 899999999999999999999965555431 111111 1111 12 247889999999 6667
Q ss_pred eEEEEEecCCHHHHHHHHHHhh---cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 360 GGYMEVTGFSAEVREQIYKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 360 ~G~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
||+++ ++++++.+.+... ...+.++..+.++...++..+..+...+.+.++++.+.+.|+++
T Consensus 254 -G~i~~---~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (402)
T TIGR01821 254 -GYIAA---SRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL 318 (402)
T ss_pred -ceeec---CHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 89876 8899998876543 12346666777776776653333556667778888888888765
No 163
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.86 E-value=1.6e-19 Score=182.70 Aligned_cols=264 Identities=14% Similarity=0.082 Sum_probs=179.9
Q ss_pred CCccccccc---CCCCCHHHHHHHHHHHHcCCCCC---CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 128 PSILDRSET---QGLFSADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 128 p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
.++++|+++ +...+|++++++.+.++..+... ...|.+..-..+|++.+|+++ | .++.+++++|. +
T Consensus 46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~----g---~~~~~~~~sG~-~ 117 (407)
T PRK09064 46 REVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH----G---KEAALVFTSGY-V 117 (407)
T ss_pred ceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh----C---CCcEEEECcHH-H
Confidence 457888888 66778999999998887653210 112333444667777777765 4 24556666665 5
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCC
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~ 280 (434)
+...++..+.. .+++.|+.....|......++..|+++..++. .|+++|++.++... ..++++|++++|+
T Consensus 118 an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~--~~~~~~v~~~~v~ 188 (407)
T PRK09064 118 SNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAAD--PDRPKLIAFESVY 188 (407)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEeCCC
Confidence 65666666541 26777777777777777777878888766653 37888888886321 1267899999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee
Q 013892 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (434)
Q Consensus 281 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~ 360 (434)
||+|.+.+ +++|.++|+++|+++|+||+|....|+..+ ..+... ..+. ++ ..|+++||||.| |++|
T Consensus 189 s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g--~g~~~~-~~~~---~~-~div~~t~sKa~-g~~G--- 254 (407)
T PRK09064 189 SMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRG--GGIAER-DGLM---DR-IDIIEGTLAKAF-GVMG--- 254 (407)
T ss_pred CCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCC--CChHHh-cCCC---CC-CeEEEEecchhh-hccC---
Confidence 99999998 899999999999999999999855565432 112111 1111 12 248899999999 6666
Q ss_pred EEEEEecCCHHHHHHHHHHhhc---ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 361 GYMEVTGFSAEVREQIYKVASV---NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 361 G~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
||+++ ++++++.+.+.... ..+.++..+.++...++..+.....+++++++++.+.+.|++.
T Consensus 255 G~~~~---~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (407)
T PRK09064 255 GYIAG---SAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA 319 (407)
T ss_pred ceEec---CHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 99876 88999988765432 2245556666665655433333445678888899999888875
No 164
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.86 E-value=7e-20 Score=182.66 Aligned_cols=213 Identities=15% Similarity=0.144 Sum_probs=162.7
Q ss_pred cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCeEEEE
Q 013892 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVPY 242 (434)
Q Consensus 167 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~ 242 (434)
.-..+|++.++++. | .++.++++++++|+..++..++ .+||+|+++.+.|...... ++..|+++..+
T Consensus 40 p~~~~le~~la~l~----g----~~~a~~~~sG~~Ai~~~l~~l~-~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v 110 (369)
T cd00614 40 PTVDALEKKLAALE----G----GEAALAFSSGMAAISTVLLALL-KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFV 110 (369)
T ss_pred hhHHHHHHHHHHHH----C----CCCEEEEcCHHHHHHHHHHHHc-CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEe
Confidence 33678888888876 3 2467777888999999999998 7999999999999876543 44678888887
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCC
Q 013892 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (434)
Q Consensus 243 ~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 322 (434)
+.+ |++.+++++++ ++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|....+...
T Consensus 111 ~~~-------d~~~l~~~i~~------~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~~-- 172 (369)
T cd00614 111 DPD-------DPEALEAAIKP------ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQRP-- 172 (369)
T ss_pred CCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCCh--
Confidence 643 58889888865 7899999999999999998 88999999999999999999987544211
Q ss_pred ccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC
Q 013892 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP 400 (434)
Q Consensus 323 ~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~ 400 (434)
. .++ .| ++++|+||.++| +| .++||+++ .++++++.+..... ...+.++..++++...+
T Consensus 173 -------~-~~g---~D---ivv~S~tK~l~g-~~~~~gG~v~~--~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l-- 233 (369)
T cd00614 173 -------L-ELG---AD---IVVHSATKYIGG-HSDVIAGVVVG--SGEALIQRLRFLRLALGTILSPFDAWLLLRGL-- 233 (369)
T ss_pred -------h-hhC---Cc---EEEeccceeccC-CCCceEEEEEe--CcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCC--
Confidence 0 111 23 889999999954 44 89999976 23388888877655 44456666665554444
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 401 PKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 401 ~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+.+...+++..++...+.+.|+++.
T Consensus 234 -~tl~~r~~~~~~na~~la~~L~~~~ 258 (369)
T cd00614 234 -KTLPLRMERHSENALKVAEFLEKHP 258 (369)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4455677888889999999888764
No 165
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=7.2e-20 Score=182.55 Aligned_cols=220 Identities=15% Similarity=0.157 Sum_probs=168.1
Q ss_pred CCCCCC--cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HH
Q 013892 161 GAYSHS--QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----AL 234 (434)
Q Consensus 161 ~~Y~~~--~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~ 234 (434)
..|+.. .+...|++.+|++. + .+++++++|+++|+..++.+++ ++||+|++++|.|.++...+ ..
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le----~----~~~~~~~~sG~~Ai~~~l~all-~~GD~Vvv~~~~Y~~t~~l~~~~l~~ 123 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELE----G----GAGTALYPSGAAAISNALLSFL-KAGDHLLMVDSCYEPTRDLCDKILKG 123 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEECCCcHHHHHHHHHhhhh
Confidence 346653 34579999999885 1 2478999999999999999888 79999999999998876543 45
Q ss_pred cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 013892 235 HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
.|+++..++.. +.+.+++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|..
T Consensus 124 ~Gi~v~~v~~~-------~~e~l~~~l~~------~TklV~lespsNPtg~v~d---l~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 124 FGIETTYYDPM-------IGEGIRELIRP------NTKVLFLESPGSITMEVQD---VPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred cceEEEEECCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCccc
Confidence 68888776532 45778888766 7999999999999988755 99999999999999999999986
Q ss_pred CccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHH
Q 013892 315 NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQIL 393 (434)
Q Consensus 315 ~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~ 393 (434)
..... | + .++ -| |+++|.+|.++|..+..+|+++. ++++.+.+..... ...+.++...+.
T Consensus 188 p~~~~--P---l-----~~G---aD---ivv~S~tK~l~Gh~d~~~G~~~~---~~~~~~~l~~~~~~~G~~~~p~~a~l 248 (394)
T PRK09028 188 PINSR--P---F-----EMG---VD---ISIQAATKYIVGHSDVMLGTATA---NEKHWDQLREHSYLMGQCTSPDDVYL 248 (394)
T ss_pred cccCC--c---c-----ccC---ce---EEEEeCCeEecCCCCEEEEEEEC---CHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 43211 1 1 112 23 89999999998877899997754 7777777765544 455666666554
Q ss_pred HHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 394 ASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 394 ~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+ ++.-+.+.-+.++..++...+.+.|+++..
T Consensus 249 ~---~rgl~TL~lR~~~~~~na~~la~~L~~~p~ 279 (394)
T PRK09028 249 A---MRGLRTLGVRLAQHEKNALKVANWLATRPE 279 (394)
T ss_pred H---HcccCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4 444456778889999999999999988753
No 166
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.86 E-value=1e-19 Score=182.32 Aligned_cols=218 Identities=14% Similarity=0.184 Sum_probs=155.8
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----c
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----H 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~ 235 (434)
...|+.+. ..+|++.+|+++ | .++ .+++++++.++..++..++ ++||+|+++.|.|+.....+.. .
T Consensus 55 y~r~~~pt-~~~Le~~lA~l~----G---~~~-al~~~sG~~Ai~~~l~al~-~~Gd~Vv~~~~~y~~~~~~~~~~~~~~ 124 (386)
T PRK06767 55 YSRLGNPT-VKLFEERMAVLE----G---GEE-ALAFGSGMAAISATLIGFL-KAGDHIICSNGLYGCTYGFLEVLEEKF 124 (386)
T ss_pred ccCCCCcc-hHHHHHHHHHHh----C---CCc-EEEECCHHHHHHHHHHHHh-CCCCEEEEcCCcHHHHHHHHHHHHhhc
Confidence 34455444 788999999987 3 233 4444555678998888888 7999999999999876555443 4
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
|+++..++ ..|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 125 gi~~~~~~-------~~d~~~l~~~i~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~ 188 (386)
T PRK06767 125 MITHSFCD-------METEADIENKIRP------NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSP 188 (386)
T ss_pred CeEEEEeC-------CCCHHHHHHhhCc------CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 55554443 2378899988876 7999999999999999998 888999999999999999999753
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce-eEEEEEecCCHHHHHHHHHH-hh-cccCCchHHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSAEVREQIYKV-AS-VNLCSNISGQI 392 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R-~G~~~~~~~~~~~~~~l~~~-~~-~~~~~~~~~q~ 392 (434)
.+... + ..+ .| ++++|+||.+ +.+|.| +||+++ +++.++.+.+. +. ...+.+++.++
T Consensus 189 ~~~~p-----l-----~~g---~D---iv~~S~sK~l-~g~g~~~gG~v~~---~~~~i~~~~~~~~~~~g~~~~~~~a~ 248 (386)
T PRK06767 189 YLQRP-----L-----ELG---CD---AVVHSATKYI-GGHGDVVAGVTIC---KTRALAEKIRPMRKDIGGIMAPFDAW 248 (386)
T ss_pred ccCCc-----h-----hcC---Cc---EEEecCccee-cCCCCceeEEEEe---ChHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 33211 1 011 23 7889999999 557887 588876 77777776443 33 33344555555
Q ss_pred HHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 393 LASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 393 ~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++...| +.+....++..++...+.+.|+++.
T Consensus 249 l~~~~L---~tl~~r~~~~~~~a~~la~~L~~~p 279 (386)
T PRK06767 249 LLLRGL---KTLAVRMDRHCDNAEKIVSFLKNHD 279 (386)
T ss_pred HHHcCC---CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 444333 4455677888889999999988764
No 167
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.86 E-value=7.5e-20 Score=182.02 Aligned_cols=216 Identities=16% Similarity=0.171 Sum_probs=161.8
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHc
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALH 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~ 235 (434)
...|+. ....+|++++|++. .+ +.++++++++++..++..++ ++||+|+++.|+|..+...+ ...
T Consensus 45 y~ry~~-p~~~~Le~~lA~l~--------~~-~~v~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~y~~~~~~~~~~l~~~ 113 (366)
T PRK07582 45 YGRASN-PTWRALEAALGELE--------GA-EALVFPSGMAAITAVLRALL-RPGDTVVVPADGYYQVRALAREYLAPL 113 (366)
T ss_pred eECCCC-ccHHHHHHHHHHHc--------CC-CEEEECCHHHHHHHHHHHhc-CCCCEEEEeCCCcHhHHHHHHHHHhcC
Confidence 445554 45899999999985 23 45555666689999998888 79999999999998887654 346
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
|++++.++.+++ .+ .+.+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...
T Consensus 114 G~~v~~v~~~~~------~~----~~~~------~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~ 174 (366)
T PRK07582 114 GVTVREAPTAGM------AE----AALA------GADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATP 174 (366)
T ss_pred eEEEEEECCCCh------HH----Hhcc------CceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCc
Confidence 999999886532 11 1222 6899999999999998877 999999999999999999999642
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~ 394 (434)
.+..+ + +++ .| ++++|+||.+.|.+|+|+||+++ .++++++.+...+. ...+++++.++++
T Consensus 175 --~~~~p---~-----~~g---~D---ivv~S~sK~l~G~~g~~~G~v~~--~~~~l~~~l~~~~~~~g~~~~~~~a~l~ 236 (366)
T PRK07582 175 --LGQRP---L-----ELG---AD---LVVASDTKALTGHSDLLLGYVAG--RDPELMAAVERWRLLAGAIPGPFEAWLA 236 (366)
T ss_pred --cccCc---h-----hcC---Cc---EEEecccccccCCCCeeEEEEEc--CcHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 11111 1 111 24 78899999997778899999974 36788888887665 4556777777766
Q ss_pred HHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
...++ .++...++..++...+.+.|+++.
T Consensus 237 ~r~l~---tl~~R~~~~~~na~~la~~L~~~p 265 (366)
T PRK07582 237 HRSLG---TLGLRFARQCANALAVAELLAGHP 265 (366)
T ss_pred Hhccc---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 66664 345666888888888888888764
No 168
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.86 E-value=3.2e-19 Score=179.11 Aligned_cols=257 Identities=15% Similarity=0.111 Sum_probs=176.0
Q ss_pred CCCCCHHHHHHHHHHHHcCCCC---CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC
Q 013892 137 QGLFSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS 213 (434)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~ 213 (434)
+....+++++++.+++++.+.. ....|+...++.+|++.+|+++. .++.+++++|.++.. .++..++ +
T Consensus 10 gl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g-------~e~al~~~sG~~a~~-~~i~~l~-~ 80 (392)
T PLN03227 10 STSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG-------TESAILYSDGASTTS-STVAAFA-K 80 (392)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC-------CCcEEEecCcHHHHH-HHHHHhC-C
Confidence 3455778999999988774320 12237777788999999999982 236788888887777 5555677 7
Q ss_pred CCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh--------cCCCeeEEEEecCCCCCcc
Q 013892 214 ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA--------KGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 214 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~--------~g~~~~~i~l~~p~NPtG~ 285 (434)
+||.|+++++.|..+...+...+++++.++.. |.+++++.++.... ...++++|++..++||+|.
T Consensus 81 ~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~ 153 (392)
T PLN03227 81 RGDLLVVDRGVNEALLVGVSLSRANVRWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGT 153 (392)
T ss_pred CCCEEEEeccccHHHHHHHHHcCCeEEEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCc
Confidence 99999999999999988888888888877653 34455554433221 1235788888899999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+.+ +++|.++|+++|+++|+||+|....++..+. ...... .+.+. .+ .-|++.|+||.+ |.++||+++
T Consensus 154 i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~--g~~~~~-g~~p~-~~-~Div~~slsk~~----g~~gg~v~~ 221 (392)
T PLN03227 154 LAP---LKELVALKEEFHYRLILDESFSFGTLGKSGR--GSLEHA-GLKPM-VH-AEIVTFSLENAF----GSVGGMTVG 221 (392)
T ss_pred ccC---HHHHHHHHHHcCCEEEEECcccccccCCCCC--cHHHHc-CCCCC-CC-ceEEEeechhhh----hccCcEEec
Confidence 999 8899999999999999999998333433211 111110 11100 11 138888999976 577899866
Q ss_pred ecCCHHHHHHHHHHhh--ccc-CCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQIYKVAS--VNL-CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 366 ~~~~~~~~~~l~~~~~--~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
++++++.+..... .+. +.++..++++...+......++.+++++++.+.+.+.|++
T Consensus 222 ---~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~ 280 (392)
T PLN03227 222 ---SEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTN 280 (392)
T ss_pred ---CHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Confidence 8888877764432 222 2235455555444432222457888899999999999985
No 169
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.86 E-value=1.2e-19 Score=184.46 Aligned_cols=200 Identities=17% Similarity=0.211 Sum_probs=147.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCC-CCC-CCC---CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH---
Q 013892 139 LFSADSIERAWQILDQIPGRA-TGA-YSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL--- 210 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~-~~~-Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l--- 210 (434)
.+|..+++++.+.+.+..... ... |.. ...+.++|+.+++++ |.. ++++|++|+|+++++..+++.+
T Consensus 43 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~g~t~al~~i~~~~~~~ 117 (424)
T PLN02855 43 QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI----NAS-TSREIVFTRNATEAINLVAYTWGLA 117 (424)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc----CCC-CCCEEEEeCCHHHHHHHHHHHhhhh
Confidence 367889999888776543210 111 111 123468888888887 321 3579999999999999998763
Q ss_pred -hcCCCCEEEEcCCCChh----HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 211 -IRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 211 -~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
+ .+||+|+++.+.|+. |...++..|++++.++++.+ ..+|++.+++.+++ ++++|++++|+||||.
T Consensus 118 ~~-~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~ 188 (424)
T PLN02855 118 NL-KPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSE------KTKLVATHHVSNVLGS 188 (424)
T ss_pred cC-CCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhcc------CceEEEEeCccccccc
Confidence 3 689999999998874 44556778999999998654 36899999999976 7999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+++ +++|+++|+++|+++|+|++|... .. + ..+ ..++ .| +++.|++|.+ |.+| +||+.+
T Consensus 189 ~~~---~~~I~~l~~~~g~~vivD~a~~~g---~~-~-~~~----~~~~---~d---~~~~s~~K~~-gp~G--~G~l~~ 247 (424)
T PLN02855 189 ILP---VEDIVHWAHAVGAKVLVDACQSVP---HM-P-VDV----QTLG---AD---FLVASSHKMC-GPTG--IGFLWG 247 (424)
T ss_pred cCC---HHHHHHHHHHcCCEEEEEhhhhcC---Cc-C-CCc----hhcC---CC---EEEeeccccc-CCCc--cEEEEE
Confidence 999 788999999999999999999531 11 1 111 1111 34 6799999965 7555 899987
Q ss_pred ecCCHHHHHHH
Q 013892 366 TGFSAEVREQI 376 (434)
Q Consensus 366 ~~~~~~~~~~l 376 (434)
++++++.+
T Consensus 248 ---~~~~~~~~ 255 (424)
T PLN02855 248 ---KSDLLESM 255 (424)
T ss_pred ---chhhhhcC
Confidence 77777665
No 170
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.86 E-value=8.9e-20 Score=182.26 Aligned_cols=250 Identities=16% Similarity=0.138 Sum_probs=171.3
Q ss_pred CCCCHHHHHHHHHHHHcCCCC---CCCCCCC--CcchHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHHh
Q 013892 138 GLFSADSIERAWQILDQIPGR---ATGAYSH--SQGIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 138 ~~~p~~v~~~~~~~l~~~~~~---~~~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~l~~l~ 211 (434)
..+|+.+++++.+.+...... +...+++ ..+..++|+.+++++ | .+ ++++++|+|+++++.+++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~~v~~~~g~t~a~~~~~~~l~ 82 (373)
T cd06453 9 SQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFI----N--APSPDEIIFTRNTTEAINLVAYGLG 82 (373)
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----C--CCCCCeEEEeCCHHHHHHHHHHHhh
Confidence 356788999988887543210 0111111 133556777888776 3 33 6789999999999999999987
Q ss_pred cC--CCCEEEEcCCCChhH----HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 212 RS--ENDGILCPIPQYPLY----SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 212 ~~--~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
.. +||+|++++++|+.. ....+..|++++.++.+. ++.+|+++|++.+++ ++++|++++|+||||.
T Consensus 83 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~------~~~~v~~~~~~~~tG~ 154 (373)
T cd06453 83 RANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDD--DGQLDLEALEKLLTE------RTKLVAVTHVSNVLGT 154 (373)
T ss_pred hcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCC--CCCcCHHHHHHHhcC------CceEEEEeCcccccCC
Confidence 32 899999999999874 334557799999999873 457999999999976 7899999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+.+ +++|.++|+++|+++++|++|...... ..+ ..++ .| +++.|++|.+ +. .++||+++
T Consensus 155 ~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~-----~~~----~~~~---~d---~~~~s~~K~~-~~--~g~g~~~~ 213 (373)
T cd06453 155 INP---VKEIGEIAHEAGVPVLVDGAQSAGHMP-----VDV----QDLG---CD---FLAFSGHKML-GP--TGIGVLYG 213 (373)
T ss_pred cCC---HHHHHHHHHHcCCEEEEEhhhhcCcee-----eec----cccC---CC---EEEecccccc-CC--CCcEEEEE
Confidence 999 789999999999999999998743221 111 1111 23 5567889998 42 56899987
Q ss_pred ecCCHHHHHHHHHHhhc----------------------ccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQIYKVASV----------------------NLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSS 421 (434)
Q Consensus 366 ~~~~~~~~~~l~~~~~~----------------------~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~ 421 (434)
++++++.+...... ...++.....++...++.. ...++..++.++.++.+.+.
T Consensus 214 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~ 290 (373)
T cd06453 214 ---KEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALER 290 (373)
T ss_pred ---chHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 78888776543210 0124433433333333211 12345566666677777777
Q ss_pred HHHH
Q 013892 422 LARR 425 (434)
Q Consensus 422 L~~~ 425 (434)
|+++
T Consensus 291 l~~~ 294 (373)
T cd06453 291 LSEI 294 (373)
T ss_pred HhcC
Confidence 6654
No 171
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.86 E-value=6.6e-20 Score=185.65 Aligned_cols=272 Identities=16% Similarity=0.118 Sum_probs=182.0
Q ss_pred CCccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
..+||+..+ ..+ .++++++++.+.+... ..|....|..++...+++.+.+.++. +.+++++++|++++
T Consensus 36 ~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgsea 108 (413)
T cd00610 36 NRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL-----THFSLGFFYNEPAVELAELLLALTPE--GLDKVFFVNSGTEA 108 (413)
T ss_pred CEEEEcCccHHhhccCCCCHHHHHHHHHHHHhC-----cCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEEcCcHHHH
Confidence 345666553 223 6888999999888652 23444334556666666666666553 57899999999999
Q ss_pred HHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcC-------------CeEEEEecCCC----CCCCCCHHHHHHHHHHH
Q 013892 203 VHMMMQLLIR-SENDGILCPIPQYPLYSASIALHG-------------GTLVPYYLDEA----TGWGLETSEVKKQLEAA 264 (434)
Q Consensus 203 l~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~----~~~~~d~~~l~~~l~~~ 264 (434)
+..+++.+.. .++++|++.+++|..+.......+ ..++.++.+.. ..+..|++.|++.+++.
T Consensus 109 ~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 188 (413)
T cd00610 109 VEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH 188 (413)
T ss_pred HHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC
Confidence 9999988741 468999999999998655443322 13455555421 12455888998888652
Q ss_pred HhcCCCeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEE
Q 013892 265 KAKGITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLV 343 (434)
Q Consensus 265 ~~~g~~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i 343 (434)
+.++++++++..+|++|.++ +.+++++|.++|+++|+++|+||+|.++...+. .... ...+ ..+|
T Consensus 189 ---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~--~~~~----~~~~-~~~d---- 254 (413)
T cd00610 189 ---PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGK--MFAF----EHFG-VEPD---- 254 (413)
T ss_pred ---CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc--hhhH----hhcC-CCCC----
Confidence 11455555444477779876 677799999999999999999999998533332 1111 1111 2244
Q ss_pred EEecCCCCCCCCCCceeEEEEEecCCHHHHHHH--HHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHH
Q 013892 344 SFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI--YKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILS 420 (434)
Q Consensus 344 ~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l--~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 420 (434)
+.||||.+ + .|+|+||+++ ++++++.+ ..... .+.+.+++.+.++...++.-+. ++.++++++.++.+.+
T Consensus 255 -~~t~sK~l-~-~g~~~g~~~~---~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~-~~~~~~~~~~~~~l~~ 327 (413)
T cd00610 255 -IVTLGKGL-G-GGLPLGAVLG---REEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE-EGLLENAAELGEYLRE 327 (413)
T ss_pred -eEEEcccc-c-CccccEEEEE---cHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHH
Confidence 34889999 5 4899999977 88998886 22222 3456777888777666643211 3567778888888888
Q ss_pred HHHHHHH
Q 013892 421 SLARRAK 427 (434)
Q Consensus 421 ~L~~~~~ 427 (434)
.|++...
T Consensus 328 ~l~~~~~ 334 (413)
T cd00610 328 RLRELAE 334 (413)
T ss_pred HHHHHHh
Confidence 8877643
No 172
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.85 E-value=1.2e-19 Score=182.35 Aligned_cols=218 Identities=15% Similarity=0.151 Sum_probs=163.7
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC----hhHHHHHHHc
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY----PLYSASIALH 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y----~~~~~~~~~~ 235 (434)
...|+.+. ..+|++.+|++. | .++.+++++++.++..++..++ .+||+|+++...| ..+...++..
T Consensus 64 Y~r~~~p~-~~~le~~lA~l~----g----~~~al~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~~~~t~~~~~~~~~~~ 133 (403)
T PRK07810 64 YSRYGNPT-VSMFEERLRLIE----G----AEACFATASGMSAVFTALGALL-GAGDRLVAARSLFGSCFVVCNEILPRW 133 (403)
T ss_pred eeCCCCch-HHHHHHHHHHHh----C----CCcEEEECChHHHHHHHHHHHh-CCCCEEEEccCCcchHHHHHHHHHHHc
Confidence 44555554 778888898886 2 3477888888899988888887 7999999988555 4455667788
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
|++++.++. .|++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...
T Consensus 134 G~~v~~vd~-------~d~~~l~~ai~~------~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~ 197 (403)
T PRK07810 134 GVETVFVDG-------EDLSQWEEALSV------PTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATP 197 (403)
T ss_pred CcEEEEECC-------CCHHHHHHhcCc------CceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCcc
Confidence 999998863 378999999877 7999999999999999998 999999999999999999999865
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee-EEEEEecCCHHHHH-HHHHHhh-cccCCchHHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVRE-QIYKVAS-VNLCSNISGQI 392 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~-~l~~~~~-~~~~~~~~~q~ 392 (434)
.+... . .++ .| |+++|++|.+ +.+|.++ |+++. +++.+. .+..... ...+.+++.++
T Consensus 198 ~~~~~--~--------~~g---aD---ivv~S~tK~l-~g~g~~~gG~v~~---~~~~~~~~l~~~~~~~g~~~s~~~a~ 257 (403)
T PRK07810 198 LLQRG--L--------PLG---AD---VVVYSGTKHI-DGQGRVLGGAILG---DREYIDGPVQKLMRHTGPALSAFNAW 257 (403)
T ss_pred ccCCh--h--------hcC---Cc---EEEccCCcee-cCCcCceeEEEEe---ChHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 44321 1 111 23 7899999999 4578886 77754 555544 4554433 45567777776
Q ss_pred HHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 393 LASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 393 ~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++...| +.+....++..++...+.+.|+++.
T Consensus 258 l~l~~L---~tl~~R~~~~~~~a~~~a~~L~~~p 288 (403)
T PRK07810 258 VLLKGL---ETLALRVRHSNASALRIAEFLEGHP 288 (403)
T ss_pred HHHhcc---CcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 655554 4566778888888888888887654
No 173
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.85 E-value=1.5e-19 Score=179.57 Aligned_cols=253 Identities=14% Similarity=0.081 Sum_probs=170.3
Q ss_pred cccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh
Q 013892 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 211 (434)
+|..++...|+.+++++.+.+. ...|. +..++.+.+.+.+.+.+|.+ .++.+++++|+++++..++..++
T Consensus 2 ~~~~~~~~~~~~v~~a~~~~~~------~~~~~---~~~~~~~~~~~~la~~~g~~-~~~~~~~~~~~t~al~~~~~~~~ 71 (356)
T cd06451 2 LLIPGPSNVPPRVLKAMNRPML------GHRSP---EFLALMDEILEGLRYVFQTE-NGLTFLLSGSGTGAMEAALSNLL 71 (356)
T ss_pred cccCCCcCCCHHHHHHhCCCcc------CCCCH---HHHHHHHHHHHHHHHHhcCC-CCCEEEEecCcHHHHHHHHHHhC
Confidence 4556677788888888753321 12222 23333444444444444531 23457888888999999999998
Q ss_pred cCCCCEEEEcCCCChh--HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH
Q 013892 212 RSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (434)
Q Consensus 212 ~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~ 289 (434)
++||+|+++.++|+. +...++..|++++.++.++ ++.+|++++++.+++. ++++|++++|+||||.+++
T Consensus 72 -~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~-----~~~~v~i~~~~~~~G~~~~- 142 (356)
T cd06451 72 -EPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQH-----DIKAVTLTHNETSTGVLNP- 142 (356)
T ss_pred -CCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhcc-----CCCEEEEeccCCCcccccC-
Confidence 799999999988765 5677888999999999875 3589999999999753 6889999999999999998
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC
Q 013892 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (434)
Q Consensus 290 ~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~ 369 (434)
+++|.++|+++|+++++|++|.. +.. ..++. .++ .+ +++.|++|.|++ +.++||+.. +
T Consensus 143 --~~~i~~~a~~~~~~li~D~~~~~---g~~--~~~~~----~~~---~d---~~~~s~~K~l~~--p~g~G~l~~---~ 200 (356)
T cd06451 143 --LEGIGALAKKHDALLIVDAVSSL---GGE--PFRMD----EWG---VD---VAYTGSQKALGA--PPGLGPIAF---S 200 (356)
T ss_pred --HHHHHHHHHhcCCEEEEeeehhc---cCc--ccccc----ccC---cc---EEEecCchhccC--CCCcceeEE---C
Confidence 78889999999999999998762 221 11110 111 23 556789999842 345899987 7
Q ss_pred HHHHHHHHH---Hh-----------------hcccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 370 AEVREQIYK---VA-----------------SVNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 370 ~~~~~~l~~---~~-----------------~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++++.+.. .. ....+++...+.++..++.. ....++..++..++++.+.+.|++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 278 (356)
T cd06451 201 ERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL 278 (356)
T ss_pred HHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 888877753 00 01112334433433333322 1123456667777777777877764
No 174
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.84 E-value=5.4e-20 Score=177.87 Aligned_cols=167 Identities=24% Similarity=0.260 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCC
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 248 (434)
+.++++.+|+++ | . .+.+++|+|+++++..++.+++ .+||+|+++.|+|..+...+...|++++.++.+.+.
T Consensus 61 i~~~~~~~A~~~----g--a-~~~~~~~~Gst~a~~~~l~al~-~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 61 IKEAQELAARAF----G--A-KHTFFLVNGTSSSNKAVILAVC-GPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNP 132 (294)
T ss_pred HHHHHHHHHHHh----C--C-CCEEEEcCcHHHHHHHHHHHcC-CCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCc
Confidence 678888888887 3 1 2345569999999999999998 799999999999999999999999999999876554
Q ss_pred CC----CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC-ccCCCCCc
Q 013892 249 GW----GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN-VYVPEKKF 323 (434)
Q Consensus 249 ~~----~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~-~~~~~~~~ 323 (434)
+| .+|++.+++++++ ++++++|++++| ||+|.+++ +++|+++|+++|+++|+||+|... .|.+..+
T Consensus 133 ~~~~~~~i~~~~l~~~l~~----~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~- 203 (294)
T cd00615 133 YYGIAGGIPPETFKKALIE----HPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILP- 203 (294)
T ss_pred ccCcCCCCCHHHHHHHHHh----CCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccC-
Confidence 43 6899999999875 126899999999 79999998 899999999999999999999753 3333211
Q ss_pred cchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 324 ~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
.+. ...+ ..++++|++|.+ +|++.|+++.
T Consensus 204 ~~~----~~~~------~div~~S~hK~l---~g~~~~~~l~ 232 (294)
T cd00615 204 SSA----AMAG------ADIVVQSTHKTL---PALTQGSMIH 232 (294)
T ss_pred cch----hhcC------CcEEEEchhccc---chHhHHHHHH
Confidence 111 1111 248999999976 5888766654
No 175
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=3.8e-19 Score=177.86 Aligned_cols=212 Identities=18% Similarity=0.271 Sum_probs=156.8
Q ss_pred chHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH---HcCCeEEEEec
Q 013892 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LHGGTLVPYYL 244 (434)
Q Consensus 168 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~---~~g~~~~~~~~ 244 (434)
...+|++.+|+++ | .+++++++|+++|+..++..++ ++||+|+++.|.|..+...++ ..|+++..+.
T Consensus 54 ~~~~lE~~lA~l~----g----~~~~l~~~sG~~Ai~~~l~~ll-~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~- 123 (385)
T PRK08574 54 TLRPLEEALAKLE----G----GVDALAFNSGMAAISTLFFSLL-KAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY- 123 (385)
T ss_pred cHHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-
Confidence 3788999999997 2 3578888999999999998888 799999999999998877664 4577766542
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
+|++++++++++. ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 124 -------~d~~~l~~~i~~~-----~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~----- 183 (385)
T PRK08574 124 -------PSTEDIIEAIKEG-----RTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLYR----- 183 (385)
T ss_pred -------CCHHHHHHhcCcc-----CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccCC-----
Confidence 3678888888642 6899999999999999999 7899999999999999999996532211
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce-eEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCC
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPK 402 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R-~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~ 402 (434)
.+ ..+ .| ++++|++|.++| +|-. +|++++ .++++++.+...+. ...+.+++..+ .++..-+
T Consensus 184 ~l-----~~G---aD---ivv~S~sK~l~g-~~d~~gG~vi~--~~~~~~~~~~~~~~~~g~~~~p~~a~---l~l~~l~ 246 (385)
T PRK08574 184 PL-----RHG---AD---FVVHSLTKYIAG-HNDVVGGVAVA--WSGEFLEELWEWRRRLGTIMQPFEAY---LVLRGLK 246 (385)
T ss_pred hh-----hhC---Cc---EEEeeCceeecC-CCCceeEEEEE--CcHHHHHHHHHHHHhcCCCCCHHHHH---HHHcccC
Confidence 11 111 23 889999999944 5654 676654 37788888776655 34445554443 3344445
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.+....++..++...+.+.|+.+.
T Consensus 247 tL~~R~~~~~~na~~la~~L~~~p 270 (385)
T PRK08574 247 TLEVRFERQCRNAMAIAEFLSEHP 270 (385)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 566777777888888888887653
No 176
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.84 E-value=1.7e-18 Score=175.11 Aligned_cols=263 Identities=14% Similarity=0.101 Sum_probs=178.3
Q ss_pred CCccccccc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcc----hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 128 PSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 128 p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G----~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
..+++|++| +...++++++++.+.++..+. +...+....| ..+|.+.+|+++ | .+..+++++|+
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~-~~~~s~~~~~~~~~~~~le~~la~~~----g---~~~~~~~~SG~- 115 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGA-GAGGTRNISGTNHYHVLLEAELADLH----G---KEAALLFTSGY- 115 (406)
T ss_pred ccEEEeecccccCCCCCHHHHHHHHHHHHHcCC-CCcccccccCChHHHHHHHHHHHHHh----C---CCcEEEeCCcH-
Confidence 457888888 444689999999999987542 1112222223 455666666665 4 13445566654
Q ss_pred HHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC
Q 013892 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (434)
Q Consensus 201 ~al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p 279 (434)
+++..++..+.. .+|+.|++....|......++..|++++.++. .|++.+++.++... ..++++|+++++
T Consensus 116 ~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~~~v 186 (406)
T PRK13393 116 VSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLD--PHRPKLVAFESV 186 (406)
T ss_pred HHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhcc--CCCCEEEEEcCC
Confidence 688888886652 26788888888888888888888888777653 36788888776421 115788889999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce
Q 013892 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (434)
Q Consensus 280 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R 359 (434)
+|++|.+.+ +++|.++|+++|+++|+||+|....++..+. .+... ..+. ++ ..|+++||||.| |++|
T Consensus 187 ~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~--g~~~~-~~~~---~~-~~i~~~tlsKa~-g~~G-- 253 (406)
T PRK13393 187 YSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGG--GIAER-EGLA---DR-LTIIEGTLAKAF-GVMG-- 253 (406)
T ss_pred CCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCC--chhhh-cCCC---CC-CeEEEEeCchhh-cccC--
Confidence 999999999 8999999999999999999998655654321 11111 1111 22 247789999999 6666
Q ss_pred eEEEEEecCCHHHHHHHHHHhhc---ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 360 GGYMEVTGFSAEVREQIYKVASV---NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 360 ~G~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
||+++ ++++++.+...... +.+.++..+.++...++..+.....+++++++++.+.+.|++.
T Consensus 254 -G~~~~---~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (406)
T PRK13393 254 -GYITG---SAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA 318 (406)
T ss_pred -ceeeC---CHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 99865 88999888766532 2345666666666666543222334566778888888888764
No 177
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.84 E-value=6.6e-19 Score=174.46 Aligned_cols=250 Identities=14% Similarity=0.097 Sum_probs=170.6
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC
Q 013892 137 QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (434)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd 216 (434)
|..+++.+.+++...... ....|. .-...+|+.+++++ |.+-+...|++++|+++++..++..++ .++|
T Consensus 7 p~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~la~~~----~~~~~~~~i~~~~~gt~~l~~~~~~~~-~~~~ 75 (355)
T TIGR03301 7 PLSTSATVRDAMLVDWCH----WDSEFN--DVTDQVRDRLLALA----GGDDNHTCVLLQGSGTFAVEATIGSLV-PRDG 75 (355)
T ss_pred CCCCCHHHHHHhhhhccC----CCHHHH--HHHHHHHHHHHHHh----cCCCCCcEEEEeCCcHHHHHHHHHhcc-CCCC
Confidence 445667777666552211 011232 22455666666665 533333368889999999999999988 6788
Q ss_pred EEEEcCCC-Chh-HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHH
Q 013892 217 GILCPIPQ-YPL-YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (434)
Q Consensus 217 ~Vlv~~p~-y~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~ 294 (434)
+|++..+. |+. +...++..|.+++.++.+. ++.+|++++++.+++. .+++++++++++||||...+ +++
T Consensus 76 ~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~~G~~~~---~~~ 146 (355)
T TIGR03301 76 KLLVLINGAYGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAAD----PDITHVATVHHETTTGILNP---LEA 146 (355)
T ss_pred eEEEECCCchhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhC----CCceEEEEEecCCcccchhH---HHH
Confidence 86665554 443 5667788999999998764 3588999999998751 25677888899999999988 899
Q ss_pred HHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHH
Q 013892 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (434)
Q Consensus 295 i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~ 374 (434)
|+++|+++|+++|+|+++.. +.. ..++. .++ .+ +++.|++|.+.|++| +||+++ ++++++
T Consensus 147 i~~l~~~~~~~livD~~~s~---g~~--~~~~~----~~~---~d---~~~~s~~K~l~~~~G--~g~~~~---~~~~~~ 206 (355)
T TIGR03301 147 IAKVARSHGAVLIVDAMSSF---GAI--PIDIE----ELD---VD---ALIASANKCLEGVPG--FGFVIA---RRDLLE 206 (355)
T ss_pred HHHHHHHcCCEEEEEecccc---CCc--ccchh----hcC---cc---EEEecCCcccccCCc--eeEEEE---CHHHHH
Confidence 99999999999999987653 221 11211 111 22 778999998766666 699987 888888
Q ss_pred HHHHH------------------hhcccCCchHHHHHHHHHcCC---CCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 375 QIYKV------------------ASVNLCSNISGQILASLVMSP---PKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 375 ~l~~~------------------~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.+... ......++...+.++..++.. ....++..++++++++.+.+.|+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g 279 (355)
T TIGR03301 207 ASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALG 279 (355)
T ss_pred HhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 76521 011234666666655554442 22246778889999999999998753
No 178
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.84 E-value=3.4e-19 Score=182.41 Aligned_cols=221 Identities=18% Similarity=0.199 Sum_probs=155.4
Q ss_pred HHHHHH---HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----cCCeEEEEec
Q 013892 172 LRDTIA---AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYL 244 (434)
Q Consensus 172 lr~~ia---~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~~~~ 244 (434)
++++++ +++.+.+|. +.+++++|+|+++++..++.++...+||+|+++++.|+.+...++. .|++++.+++
T Consensus 110 ~~~~~~e~~~~la~l~g~--~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~ 187 (447)
T PRK00451 110 TLQAIFEYQTMICELTGM--DVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPY 187 (447)
T ss_pred HHHHHHHHHHHHHHHhCC--CcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecC
Confidence 555555 444666674 5568999999999999888877425899999999999998887665 6999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE--ccCCCCCccCCCCC
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA--DEVYQENVYVPEKK 322 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~--Deay~~~~~~~~~~ 322 (434)
++ + .+|+++|++++++ ++++|++++| ||||.+.+ +++|.++|+++|+++++ |.+..+...
T Consensus 188 ~~--~-~~d~~~l~~~i~~------~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~~----- 249 (447)
T PRK00451 188 ED--G-VTDLEALEAAVDD------DTAAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLLK----- 249 (447)
T ss_pred CC--C-CCCHHHHHHhcCC------CeEEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccCC-----
Confidence 75 3 7899999999976 7999999999 89999977 99999999999999998 543322110
Q ss_pred ccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHH--------------------------
Q 013892 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI-------------------------- 376 (434)
Q Consensus 323 ~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l-------------------------- 376 (434)
.. ..+ ..|+-+...++|||.+ .+.|+++||+.+ ++++++.+
T Consensus 250 --~~----~~~---~~D~~~~s~~k~~~~~-~~~Gpg~G~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 316 (447)
T PRK00451 250 --PP----GEY---GADIVVGEGQPLGIPL-SFGGPYLGFFAT---RKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQ 316 (447)
T ss_pred --Cc----ccC---CCCEEEECCCcCCCCC-CCCCCCchHHHh---hHHHHhhCCCCEeeeecccCCCeeeEeecccccc
Confidence 00 011 1232122234889988 678999999976 77877763
Q ss_pred --HHHhh-cccCCchHHH-HHHHHHcC--CCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 377 --YKVAS-VNLCSNISGQ-ILASLVMS--PPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 377 --~~~~~-~~~~~~~~~q-~~~~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+... ...+.+...+ .++...+. .++.+++..+++.++++.+.+.|++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 371 (447)
T PRK00451 317 HIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEI 371 (447)
T ss_pred ccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 11111 2223333333 22222221 22346778889999999999998875
No 179
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.83 E-value=6.5e-19 Score=177.66 Aligned_cols=258 Identities=11% Similarity=0.001 Sum_probs=180.7
Q ss_pred cccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh
Q 013892 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 211 (434)
-+..+|...|+.|++++.+.+ ..|. ..+..++++.+.+.+.+.+|.+ ..+.+++++|+++++..++..++
T Consensus 12 l~~pGP~~~~~~V~~a~~~~~--------~~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~ 81 (401)
T PLN02409 12 LFVPGPVNIPERVLRAMNRPN--------EDHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTL 81 (401)
T ss_pred eccCCCCCCCHHHHHHhcCCC--------CCCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcC
Confidence 345556677888887764321 1222 3467889999999998888853 23467888999999999988887
Q ss_pred cCCCCEEEEcCCCChhH--HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH
Q 013892 212 RSENDGILCPIPQYPLY--SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (434)
Q Consensus 212 ~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~ 289 (434)
++||+|+++++.|+.. ...++..|++++.++.+.+. .+|++.+++++++.. +.++++|++++++||||.+++.
T Consensus 82 -~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~--~~~~~~l~~~l~~~~--~~~~k~v~~~~~~~~tG~~~~~ 156 (401)
T PLN02409 82 -SPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQ--GADLDILKSKLRQDT--NHKIKAVCVVHNETSTGVTNDL 156 (401)
T ss_pred -CCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCC--CCCHHHHHHHHhhCc--CCCccEEEEEeecccccccCCH
Confidence 7999999999988654 56778889999999987542 579999999987510 0168999999999999999995
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC
Q 013892 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (434)
Q Consensus 290 ~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~ 369 (434)
+++.++++ |+++|+++|+|+++.-. .. ...+ ..++ -| +++.|.+|.|.+ ..++||+++ +
T Consensus 157 ~~i~~l~~-~~~~g~~~vvD~v~s~g---~~--~id~----~~~~---~D---~~~~s~~K~l~~--P~G~G~l~~---~ 215 (401)
T PLN02409 157 AGVRKLLD-CAQHPALLLVDGVSSIG---AL--DFRM----DEWG---VD---VALTGSQKALSL--PTGLGIVCA---S 215 (401)
T ss_pred HHHHHHHh-hhccCcEEEEEcccccC---Cc--cccc----cccC---cc---EEEEcCccccCc--CCCcceeEE---C
Confidence 55555555 99999999999998731 11 0111 0111 23 566677999843 246999987 8
Q ss_pred HHHHHHHHHHhh------------------c-ccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 370 AEVREQIYKVAS------------------V-NLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 370 ~~~~~~l~~~~~------------------~-~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++++.+..... . ...++...+.++...++.- ...+..++++++.++.+.+.|++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~ 292 (401)
T PLN02409 216 PKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW 292 (401)
T ss_pred HHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 888887754210 0 2246666666666665431 224566677777777888777654
No 180
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=7.7e-19 Score=174.90 Aligned_cols=221 Identities=16% Similarity=0.218 Sum_probs=163.1
Q ss_pred CCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHcCCe
Q 013892 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGT 238 (434)
Q Consensus 163 Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~ 238 (434)
|..+++....++.+++.+....+ .++.+++++ +++|+..++..++ ++||+|+++.|.|+++.. .++..|++
T Consensus 56 y~YsR~gnPt~~~Le~~la~le~---~~~~v~~sS-G~aAi~~~l~all-~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~ 130 (395)
T PRK05967 56 YTYGTRGTPTTDALCKAIDALEG---SAGTILVPS-GLAAVTVPFLGFL-SPGDHALIVDSVYYPTRHFCDTMLKRLGVE 130 (395)
T ss_pred CccCCCCChHHHHHHHHHHHHhC---CCCEEEECc-HHHHHHHHHHHhc-CCCCEEEEccCCcHHHHHHHHHHHHhcCeE
Confidence 33334455566666666655443 334454444 7899999999888 799999999999998765 45778999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccC
Q 013892 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (434)
Q Consensus 239 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 318 (434)
+..++.. +.+.+++++++ ++|+|++++|+||++.+ .++++|+++|+++|+++|+|++|....+.
T Consensus 131 v~~vd~~-------~~e~l~~al~~------~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~~ 194 (395)
T PRK05967 131 VEYYDPE-------IGAGIAKLMRP------NTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLYF 194 (395)
T ss_pred EEEeCCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCceec
Confidence 8887532 34778888876 79999999999998655 55999999999999999999999874433
Q ss_pred CCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHH
Q 013892 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLV 397 (434)
Q Consensus 319 ~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~ 397 (434)
.. + .++ -| |+++|++|.++|..+..+|+++. +++..+.+..... ...+.++.. +..+
T Consensus 195 ~p-----l-----~~G---aD---ivv~S~tKy~~Gh~d~~~G~v~~---~~~~~~~l~~~~~~~G~~~~p~d---a~l~ 252 (395)
T PRK05967 195 RP-----L-----DFG---VD---ISIHAATKYPSGHSDILLGTVSA---NEKCWPQLLEAHGTLGLCAGPDD---TYQI 252 (395)
T ss_pred Ch-----h-----HcC---CC---EEEEecccccCCCCCeeEEEEEc---CHHHHHHHHHHHHHcCCCCCHHH---HHHH
Confidence 21 1 122 34 89999999998877899997754 6677676654443 444555554 4455
Q ss_pred cCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 398 MSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 398 l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++.-+.+.-+.++..++...+.+.|+++.
T Consensus 253 ~rgl~Tl~lR~~~~~~na~~lA~~L~~hp 281 (395)
T PRK05967 253 LRGLRTMGIRLEHHRKSALEIARWLEGRP 281 (395)
T ss_pred HcCcccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 66666777888899999999999998864
No 181
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=9.3e-19 Score=174.39 Aligned_cols=219 Identities=15% Similarity=0.168 Sum_probs=162.2
Q ss_pred CCCCCCcch---HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HH
Q 013892 161 GAYSHSQGI---KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IA 233 (434)
Q Consensus 161 ~~Y~~~~G~---~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~----~~ 233 (434)
..|+. .|. ..|++.+|++. | .+++++++|+++|+..++..++ ++||.|++++|.|+..... ++
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~----g----~~~~~~~~sG~~Ai~~al~all-~~GD~Vl~~~~~y~~t~~~~~~~~~ 111 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELE----G----GAGCYLYPSGLAAVTNSILAFV-KAGDHVLMVDSAYEPTRYFCDIVLK 111 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHh----C----CCcEEEECcHHHHHHHHHHHhc-CCCCEEEEcCCCcHHHHHHHHHHHH
Confidence 34553 344 58888888886 2 4589999999999999999988 7999999999999876543 35
Q ss_pred HcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCC
Q 013892 234 LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (434)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~ 313 (434)
..|+++..++.. +.+.+++++++ ++|+|++++|+||+|.+.+ +++|+++|+++|+++|+|++|.
T Consensus 112 ~~gi~v~~~d~~-------~~e~l~~~i~~------~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a 175 (377)
T TIGR01324 112 RMGVDITYYDPL-------IGEDIATLIQP------NTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWA 175 (377)
T ss_pred hcCcEEEEECCC-------CHHHHHHhcCC------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCc
Confidence 578887776432 22778888776 7999999999999988765 9999999999999999999998
Q ss_pred CCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHH
Q 013892 314 ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQI 392 (434)
Q Consensus 314 ~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~ 392 (434)
....... + .++ .| |+++|++|.++|..+..+|+++. +++.++.+..... ...+.++...+
T Consensus 176 ~g~~~~p-----l-----~~g---aD---ivv~S~tK~l~G~~d~~gG~v~~---~~~~~~~l~~~~~~~G~~l~p~~a~ 236 (377)
T TIGR01324 176 AGLLFKP-----L-----EHG---VD---ISIQAGTKYLVGHSDIMIGTVVA---NARTWDQLREHSYLMGQMVDADDAY 236 (377)
T ss_pred cccccCc-----c-----ccC---ce---EEEecCceeccCCCCceEEEEEe---CHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 6443221 0 111 23 88999999997766789998876 7777777764443 33344554443
Q ss_pred HHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 393 LASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 393 ~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
. +++..+.+...+++..++...+.+.|+++..
T Consensus 237 ~---~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~ 268 (377)
T TIGR01324 237 T---TLRGLRTLGVRLKQHQESSLAIAKWLSEQPE 268 (377)
T ss_pred H---HHhhhhhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3 3344345566778888888888888887753
No 182
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.83 E-value=2.3e-18 Score=171.81 Aligned_cols=253 Identities=12% Similarity=0.027 Sum_probs=173.9
Q ss_pred cccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC
Q 013892 134 SETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS 213 (434)
Q Consensus 134 ~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~ 213 (434)
.-+|...++.+.+++.+.+.. ....|. .-..++|+.+++++ |.+-+.+.|++++|+++++..++..+. .
T Consensus 10 ~pgP~~~~~~~~~a~~~~~~~----~~~~~~--~~~~~~~~~l~~l~----~~~~~~~~i~~~~~gt~~l~~~~~~l~-~ 78 (368)
T PRK13479 10 TPGPLTTSRTVREAMLRDWGS----WDDDFN--ALTASVRAKLVAIA----TGEEGYTCVPLQGSGTFSVEAAIGSLV-P 78 (368)
T ss_pred cCCCCCCCHHHHHHhCCCCCC----CChHHH--HHHHHHHHHHHHHh----CCCCCceEEEEcCCcHHHHHHHHHhcc-C
Confidence 344556677776665332210 011122 23556666666665 432223568899999999999999998 6
Q ss_pred CCCEEEEcCCCChhH--HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHH
Q 013892 214 ENDGILCPIPQYPLY--SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (434)
Q Consensus 214 ~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~ 291 (434)
+||.|+++.++|.+. ...++..|++++.++.+++ +.+|++++++++++. .++++|++++|+||||...+
T Consensus 79 ~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~--~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~--- 149 (368)
T PRK13479 79 RDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGED--EPPDAAEVEAALAAD----PRITHVALVHCETTTGILNP--- 149 (368)
T ss_pred CCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCC--CCCCHHHHHHHHHhC----CCCcEEEEEcccCccccccC---
Confidence 899999998888765 4777889999999998643 478999999988751 14678999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~ 371 (434)
+++|.++|+++|+++|+|++ +. ++.. ..++ .....| +++.|++|.+.|.+| +||+++ +++
T Consensus 150 ~~~i~~l~~~~~~~livDa~-~~--~g~~--~~~~-------~~~~~d---~~v~s~~K~l~g~~G--~G~l~~---~~~ 209 (368)
T PRK13479 150 LDEIAAVAKRHGKRLIVDAM-SS--FGAI--PIDI-------AELGID---ALISSANKCIEGVPG--FGFVIA---RRS 209 (368)
T ss_pred HHHHHHHHHHcCCEEEEEcc-cc--cCCc--cccc-------cccCce---EEEecCccccccCCC--ceEEEE---CHH
Confidence 78999999999999999954 44 4332 1111 111133 566899998767778 599987 888
Q ss_pred HHHHHHHHhh------------------cccCCchHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 372 VREQIYKVAS------------------VNLCSNISGQILASLVMS---PPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 372 ~~~~l~~~~~------------------~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+++.+..... ....++.....++..++. .....++..+++.++++.+.+.|+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g 285 (368)
T PRK13479 210 ELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALG 285 (368)
T ss_pred HHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8887654321 112445455444433333 223356778899999999999998864
No 183
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.83 E-value=2.1e-18 Score=172.02 Aligned_cols=198 Identities=18% Similarity=0.266 Sum_probs=148.8
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcCCCCEE
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGI 218 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~V 218 (434)
++++.++++.+.+.... . | |...+++++++++.+..| .+++++|+|+++++.+++.++ + ++||+|
T Consensus 9 ~~~~e~~a~~~~~~~~~---~--~----~~g~~~~~~e~~la~~~g----~~~~v~~~sgt~aL~~~l~al~~-~pGd~V 74 (376)
T TIGR02379 9 VTGQELEYIAEAISEGK---L--S----GDGPFSRRCETWLENRTG----TKKALLTPSCTAALEMAALLLDI-QPGDEV 74 (376)
T ss_pred CCHHHHHHHHHHHHcCC---c--c----CCcHHHHHHHHHHHHHhC----CCeEEEeCCHHHHHHHHHHHcCC-CCcCEE
Confidence 45667778877776521 1 1 122456666666666544 468999999999999998887 5 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.++|..+...+...|++++.++++++ +|.+|++.+++++++ ++|+|+ |+||+|...+ +++|.++
T Consensus 75 iv~~~t~~~~~~~~~~~G~~~v~vd~d~~-~~~~d~~~le~~i~~------~tk~Ii---p~~~~G~~~d---~~~I~~l 141 (376)
T TIGR02379 75 IMPSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIESAITH------RTKAIV---PVHYAGVACD---MDTIMAL 141 (376)
T ss_pred EECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCc------CceEEE---EeCCCCCccC---HHHHHHH
Confidence 99999999999999999999999999864 588999999999876 788886 5678999988 7899999
Q ss_pred HHHcCCEEEEccCCCCCc-cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~-~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
|+++|++||+|++|..+. |.+. +..+ ..++.+++++. +|.+. +|.++|+++. .++++.+++.
T Consensus 142 a~~~~i~vIeDaa~~~g~~~~~~-~~g~-----------~~~~~~fSf~~-~K~l~--~g~~gG~v~~--~~~~~~~~~~ 204 (376)
T TIGR02379 142 ANKHQLFVIEDAAQGVMSTYKGR-ALGS-----------IGHLGTFSFHE-TKNYT--SGGEGGALLI--NDQAFIERAE 204 (376)
T ss_pred HHHCCCEEEEECccccCCccCCc-ccCC-----------CCCEEEEeCCC-CCcCc--ccCCceEEEE--CCHHHHHHHH
Confidence 999999999999998754 4432 1111 11211222222 48884 7889999875 4689999888
Q ss_pred HHhh
Q 013892 378 KVAS 381 (434)
Q Consensus 378 ~~~~ 381 (434)
.++.
T Consensus 205 ~~~~ 208 (376)
T TIGR02379 205 IIRE 208 (376)
T ss_pred HHHH
Confidence 7654
No 184
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=1.3e-18 Score=174.47 Aligned_cols=211 Identities=19% Similarity=0.244 Sum_probs=157.3
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhH----HHHHHHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~ 244 (434)
..+|++.+|++. | .+ +.+++++| +.++..++. ++ .+||+|+++.|.|+.. ...++..|++++.++.
T Consensus 56 ~~~le~~lA~l~----g--~~-~~v~~~sG-~~ai~~~l~-~l-~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 56 REALEDIIAELE----G--GT-KGFAFASG-MAAISTAFL-LL-SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred HHHHHHHHHHHh----C--CC-CeEEECCH-HHHHHHHHH-Hh-CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 567888888886 3 22 45666666 568888876 55 6999999999999743 3455678999999875
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
. |++.+++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|........
T Consensus 126 ~-------d~~~l~~~l~~------~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~~---- 185 (390)
T PRK08064 126 T-------NLEEVAQNIKP------NTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQKP---- 185 (390)
T ss_pred C-------CHHHHHHhcCC------CceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccccCc----
Confidence 3 68889888876 7999999999999999987 88999999999999999999986432211
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhc-ccCCchHHHHHHHHHcCCCCC
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASV-NLCSNISGQILASLVMSPPKV 403 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~~~~~ 403 (434)
+ .++ .| ++++|++|.++|..|...|++++ .++++++.+..++.. ..+.++...+. ++..-+.
T Consensus 186 -~-----~~g---~D---ivv~S~tK~~~G~~~~laG~~v~--~~~~~~~~l~~~~~~~g~~~~~~~a~l---~~~gl~t 248 (390)
T PRK08064 186 -L-----DLG---AD---VVLHSATKFLAGHSDVLAGLAVV--KDEELAQKLYFLQNSFGAVLGVQDCWL---VLRGLKT 248 (390)
T ss_pred -h-----hhC---Cc---EEEeecceeccCCccceeEEEEe--CCHHHHHHHHHHHHhcCCCCCHHHHHH---HHcccCc
Confidence 1 111 23 78999999997766778898864 367898988877763 33333443333 4444455
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHH
Q 013892 404 GDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 404 ~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+...+++..++...+.+.|+++.
T Consensus 249 l~~R~~~~~~~a~~la~~L~~~~ 271 (390)
T PRK08064 249 LHVRLEHSSETANKIALYLQEHP 271 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 67788888999999998888764
No 185
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.83 E-value=2.6e-19 Score=176.90 Aligned_cols=228 Identities=13% Similarity=0.054 Sum_probs=168.5
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC-----------C--CCEEEEcCCCCh
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-----------E--NDGILCPIPQYP 226 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~-----------~--gd~Vlv~~p~y~ 226 (434)
...|....+..++++++++++.+.+|.+.+.+++++|+|+++++..++.+++.. + ++.|+++.++|.
T Consensus 27 ~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~ 106 (345)
T cd06450 27 DFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHV 106 (345)
T ss_pred CcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchh
Confidence 345888889999999999999999887655668999999999999999887520 2 348899999999
Q ss_pred hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 013892 227 LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306 (434)
Q Consensus 227 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l 306 (434)
.+...++..|.+++.++++++ +.+|++.|++++++...++.++++|++++|+||||.+.+ +++|+++|+++|+++
T Consensus 107 ~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~l 181 (345)
T cd06450 107 SVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP---LEEIADLAEKYDLWL 181 (345)
T ss_pred HHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---HHHHHHHHHHhCCeE
Confidence 999999989999999998754 389999999999876666667888999999999999866 899999999999999
Q ss_pred EEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCC
Q 013892 307 LADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCS 386 (434)
Q Consensus 307 i~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~ 386 (434)
++|++|..+.+.... .. .... ...++. .+..|++|.+ + ++.++|++.+ .
T Consensus 182 ~vD~a~~~~~~~~~~-~~---~~~~----~~~~~d-~~~~s~~K~l-~-~p~g~g~~~~---~----------------- 230 (345)
T cd06450 182 HVDAAYGGFLLPFPE-PR---HLDF----GIERVD-SISVDPHKYG-L-VPLGCSAVLV---R----------------- 230 (345)
T ss_pred EEechhhHHHhhChh-hH---HHhc----CccccC-EEEEchhHhh-C-CCcchHHHHH---H-----------------
Confidence 999999987653221 00 0001 112221 4567999976 3 5788898754 2
Q ss_pred chHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 387 NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 387 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+.++++...+.. ..+++.+++..+.++.+.+.|++.
T Consensus 231 -~~~~~~~l~~l~~-~g~~~~~~~~~~~~~~l~~~L~~~ 267 (345)
T cd06450 231 -ALKLWATLRRFGR-DGYGEHIDRIVDLAKYLAELIRAD 267 (345)
T ss_pred -HHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3333333333322 123455666666677777766654
No 186
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.83 E-value=1.7e-18 Score=171.88 Aligned_cols=221 Identities=13% Similarity=0.142 Sum_probs=160.9
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeE
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL 239 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 239 (434)
...|+.+. ..+|++++|++. ..+++++++|+++|+.+++. ++ ++||+|+++.+.|......+.......
T Consensus 48 Y~R~~~p~-~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l-~~GD~VI~~~~~yg~~~~~~~~~~~~~ 116 (364)
T PRK07269 48 YTRTKNPT-RAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VF-PVGSKVVAVRDLYGGSFRWFNQQEKEG 116 (364)
T ss_pred eeCCCCcc-HHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-Hh-CCCCEEEEecCCcCchHHHHHHHHhcC
Confidence 44455444 789999999997 35689999999999999985 55 799999999999976554433321100
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 013892 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (434)
Q Consensus 240 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~ 319 (434)
.+.. .|..|++++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+..
T Consensus 117 -~~~~----~~~~d~~~l~~~i~~------~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~~~ 182 (364)
T PRK07269 117 -RFHF----TYANTEEELIAAIEE------DTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIYQR 182 (364)
T ss_pred -cEEE----EecCCHHHHHHhcCc------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 0111 235689999999976 7999999999999999987 9999999999999999999986533221
Q ss_pred CCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHc
Q 013892 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVM 398 (434)
Q Consensus 320 ~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l 398 (434)
+ + ..+ .| |+++|++|.++|..+.-+|+++. .++++.+++...+. ...+.+++..+++..-|
T Consensus 183 --p---l-----~~g---aD---ivv~S~tK~l~g~~d~~gG~v~~--~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L 244 (364)
T PRK07269 183 --P---I-----ELG---AD---IVLHSATKYLSGHNDVLAGVVVT--NDLELYEKLFYNLNTTGAVLSPFDSYLLMRGL 244 (364)
T ss_pred --c---h-----hhC---Cc---EEEecCceeccCCCcccceEEEe--CcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCC
Confidence 1 1 111 23 88999999996533346788764 36788888876554 34466677666655555
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 399 SPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 399 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+.++..+++..++...+.+.|+.+.
T Consensus 245 ---~tL~~r~~~~~~na~~~a~~L~~~p 269 (364)
T PRK07269 245 ---KTLSLRMERSTANAQEVVAFLKKSP 269 (364)
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4567788888888888888888754
No 187
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=2.6e-18 Score=171.61 Aligned_cols=219 Identities=16% Similarity=0.215 Sum_probs=159.0
Q ss_pred CCCCCCcc--hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHH
Q 013892 161 GAYSHSQG--IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IAL 234 (434)
Q Consensus 161 ~~Y~~~~G--~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~----~~~ 234 (434)
..|....+ ..+|++.+++++ | .++++++++++.++..++. ++ ++||+|+++.+.|..+... +..
T Consensus 39 ~~Y~r~~~p~~~~le~~la~l~----g----~~~~l~~~sG~~al~~~l~-ll-~~Gd~Vl~~~~~y~~~~~~~~~~~~~ 108 (378)
T TIGR01329 39 YDYTRSGNPTRTALESLLAKLD----K----ADRAFAFSSGMAALDVITR-LL-NNGDEIIAGDDLYGGTDRLLTQVVPR 108 (378)
T ss_pred CccCCCCChHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHH-Hh-CCCCEEEEcCCCchHHHHHHHHHHHH
Confidence 44654321 345555555554 4 2466666767789988876 56 7999999999999876553 455
Q ss_pred cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 013892 235 HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
.|++++.++.. |++.+++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|..
T Consensus 109 ~G~~v~~vd~~-------d~~~le~~i~~------~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~ 172 (378)
T TIGR01329 109 SGVVVVHVDTT-------DLDKVKAALGP------KTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMS 172 (378)
T ss_pred cCcEEEEeCCC-------CHHHHHHhcCc------CceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcc
Confidence 79999988753 78999998875 7999999999999999998 99999999999999999999854
Q ss_pred CccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHH
Q 013892 315 NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQIL 393 (434)
Q Consensus 315 ~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~ 393 (434)
.... .++ .++ .| ++++|++|.++|..|.++|++++ .++++.+++...+. ...+.++...+
T Consensus 173 ~~~~-----~~l-----~~g---~D---i~v~S~tK~l~G~~~~~~G~v~~--~~~~~~~~~~~~~~~~G~~~~~~~a~- 233 (378)
T TIGR01329 173 PLLC-----NPL-----ELG---AD---IVYHSATKFLAGHSDVMAGVLAV--KGEEIAKKVYFLQNSTGSGLAPFDCW- 233 (378)
T ss_pred cccC-----Chh-----hcC---Cc---EEEEecceeccCCccceeEEEEe--CcHHHHHHHHHHHHhcCCcCCHHHHH-
Confidence 2211 111 111 23 88999999986655689999975 35666677776655 34444555443
Q ss_pred HHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 394 ASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 394 ~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.++...+.+...+++..++...+.+.|+++.
T Consensus 234 --l~~~~l~tl~~R~e~~~~na~~la~~L~~~~ 264 (378)
T TIGR01329 234 --LLLRGIKTLAIRIEKQQENARAIAMFLSTHP 264 (378)
T ss_pred --HHHccCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3344556677888888888888988888654
No 188
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.82 E-value=1.4e-18 Score=175.82 Aligned_cols=162 Identities=19% Similarity=0.206 Sum_probs=128.5
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhH----HHHHHHcC
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALHG 236 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~----~~~~~~~g 236 (434)
..|+.+. ..+|++.+|+++ | .+..++++++++++..++..++ .+||+|+++.+.|+.. ...++..|
T Consensus 52 sr~~~p~-~~~le~~lA~l~----g----~~~~v~~~sG~~Ai~~al~~l~-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 121 (418)
T TIGR01326 52 SRLMNPT-TDVLEQRIAALE----G----GVAALAVASGQAAITYAILNLA-QAGDNIVSSSYLYGGTYNLFKHTLKRLG 121 (418)
T ss_pred ECCCChh-HHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHh-CCCCEEEEECCCcHHHHHHHHHHHHHcC
Confidence 3444443 678888888886 3 2467889999999999998888 7999999999998653 34466789
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
++++.++.+ |++.+++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....
T Consensus 122 ~~v~~v~~~-------d~~~l~~~l~~------~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~ 185 (418)
T TIGR01326 122 IEVRFVDPD-------DPEEFEKAIDE------NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPY 185 (418)
T ss_pred cEEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhh
Confidence 999988742 78999998876 7899999999999999998 8899999999999999999997532
Q ss_pred cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 317 ~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+.. .+ ..+ ..|+++|+||.+ |.+|+|+||+++
T Consensus 186 ~~~-----~l-----~~g------~Divv~S~sK~l-~g~G~~lGg~v~ 217 (418)
T TIGR01326 186 LCR-----PI-----DHG------ADIVVHSATKYI-GGHGTAIGGVIV 217 (418)
T ss_pred cCC-----ch-----hcC------CeEEEECccccc-cCCccceEEEEE
Confidence 111 00 011 248999999999 669999999987
No 189
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=1.5e-18 Score=173.19 Aligned_cols=218 Identities=19% Similarity=0.216 Sum_probs=155.1
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh-HHH---HHHHcC
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL-YSA---SIALHG 236 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~-~~~---~~~~~g 236 (434)
..|+.+. ...|++.+|++. | .+..+++++| +.++..++. ++ .+||+|+++.|+|+. |.. .+...|
T Consensus 45 ~r~~~p~-~~~Le~~lA~l~----g---~~~~~~~~sG-~aai~~~~~-~l-~~Gd~Viv~~~~y~~~~~~~~~~~~~~G 113 (377)
T PRK07671 45 SRTGNPT-RAALEELIAVLE----G---GHAGFAFGSG-MAAITAVMM-LF-SSGDHVILTDDVYGGTYRVMTKVLNRFG 113 (377)
T ss_pred CCCCChH-HHHHHHHHHHHh----C---CCceEEeCCH-HHHHHHHHH-Hh-CCCCEEEECCCccchHHHHHHHHHhcCC
Confidence 3444433 677888888876 3 1234666665 567877664 55 699999999999984 432 344579
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
++++.++. .|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....
T Consensus 114 ~~v~~v~~-------~d~~~l~~ai~~------~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~ 177 (377)
T PRK07671 114 IEHTFVDT-------SNLEEVEEAIRP------NTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPY 177 (377)
T ss_pred eEEEEECC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccc
Confidence 99888863 378999999876 7999999999999999987 8889999999999999999997643
Q ss_pred cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhc-ccCCchHHHHHHH
Q 013892 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASV-NLCSNISGQILAS 395 (434)
Q Consensus 317 ~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~ 395 (434)
+.. + + .++ .+ |+++|+||.++|..+.-.|++++ .++++++.+...+.. ..+.++...++
T Consensus 178 ~~~--p---~-----~~g---~D---ivv~S~sK~l~G~~~~~~G~~v~--~~~~l~~~~~~~~~~~g~~~~~~~a~l-- 237 (377)
T PRK07671 178 WQS--P---I-----SLG---AD---IVLHSATKYLGGHSDVVAGLVVV--NSPELAEDLHFVQNSTGGILGPQDSWL-- 237 (377)
T ss_pred cCC--h---h-----hhC---Ce---EEEecCcccccCCccceeEEEEe--CcHHHHHHHHHHHHhhcCCCCHHHHHH--
Confidence 321 1 0 111 23 88999999995544456787754 367888888776653 33444444443
Q ss_pred HHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 396 LVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 396 ~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++...+.+...+++..++...+.+.|+++.
T Consensus 238 -~~~~l~tl~~R~~~~~~na~~la~~L~~~~ 267 (377)
T PRK07671 238 -LLRGLKTLGIRMEEHETNSRAIAEFLNNHP 267 (377)
T ss_pred -HHcCcChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 444445566777888888888888888754
No 190
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.82 E-value=1.2e-18 Score=175.58 Aligned_cols=265 Identities=13% Similarity=0.086 Sum_probs=172.6
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|.+++++.+.++.... ...+.......+|.+.++++ .+ .+.+++++++++
T Consensus 39 G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~----~~----~~~~~~~~SGse 108 (396)
T PRK04073 39 GNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTL--TSRAFHSDQLGPWYEKVAKL----TG----KDMVLPMNTGAE 108 (396)
T ss_pred CCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccc--cccccCCHHHHHHHHHHHhc----CC----CCeEEEcCChHH
Confidence 4446676554 223578899999998876432 11122222233444444443 22 368999999999
Q ss_pred HHHHHHHHHhcC--------CC-CEEEEcCCCChhHH-HHHHHcCCeEEE---EecCCC---CCCCCCHHHHHHHHHHHH
Q 013892 202 AVHMMMQLLIRS--------EN-DGILCPIPQYPLYS-ASIALHGGTLVP---YYLDEA---TGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 202 al~~~l~~l~~~--------~g-d~Vlv~~p~y~~~~-~~~~~~g~~~~~---~~~~~~---~~~~~d~~~l~~~l~~~~ 265 (434)
|+..+++....- +| ++|+..+-+|.+.. ..+...+..... -+...+ -.| .|++.+++.+++
T Consensus 109 A~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~i~~-- 185 (396)
T PRK04073 109 AVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-GDLEALKAAITP-- 185 (396)
T ss_pred HHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-CCHHHHHHhccc--
Confidence 999998876410 33 67888877776543 333333311000 000000 011 278889888865
Q ss_pred hcCCCeeEEEEecCCCCCccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEE
Q 013892 266 AKGITVRALVVINPGNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVS 344 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~ 344 (434)
++++|+++.++||||.+++.+ .+++|.++|+++|+++|+||+|.++.+.+. ... .+.....+| ++
T Consensus 186 ----~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~--~~~-----~~~~~~~pd--i~- 251 (396)
T PRK04073 186 ----NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK--LFA-----CDWDNVTPD--MY- 251 (396)
T ss_pred ----CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH--HHH-----hhhcCCCCC--EE-
Confidence 688888888899999998765 699999999999999999999998644332 111 111112345 22
Q ss_pred EecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHH
Q 013892 345 FQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 345 i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
+|||.+ |..|+|+||+++ ++++++.+..... .+.+.+++++.++...|+..+. +...++.++.++.+.+.|+
T Consensus 252 --~~sK~l-g~gg~~ig~~~~---~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~-~~l~~~~~~~~~~l~~~L~ 324 (396)
T PRK04073 252 --ILGKAL-GGGVFPISCVAA---NRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEE-EKLPERSLELGEYFKEQLK 324 (396)
T ss_pred --Eecccc-cCCCCcceEEEE---cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHH
Confidence 579999 777899999987 8899888865332 4557888999988888863211 2455677778888888887
Q ss_pred HH
Q 013892 424 RR 425 (434)
Q Consensus 424 ~~ 425 (434)
+.
T Consensus 325 ~l 326 (396)
T PRK04073 325 EI 326 (396)
T ss_pred hh
Confidence 75
No 191
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.82 E-value=9.9e-19 Score=177.70 Aligned_cols=265 Identities=16% Similarity=0.093 Sum_probs=176.4
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -...++.+++++.+++.+.. ..+.+..+..+|+++|++++.. .+++++++|+++
T Consensus 47 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~----~~~~~~~~~~~lae~l~~~~~~-------~~~v~~~~sGse 115 (423)
T TIGR00713 47 GNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT----SYGAPTEAEILLAKEIISRVPS-------VEMVRFVNSGTE 115 (423)
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHHhCC----cCCCCCHHHHHHHHHHHHhCCc-------ccEEEEeCCHHH
Confidence 4456776555 23567899999999987632 2223566789999999988621 368999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHH---cCCeEEEEecCCC-------CCC---CCCHHHHHHHHHHHHhc
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIAL---HGGTLVPYYLDEA-------TGW---GLETSEVKKQLEAAKAK 267 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~---~g~~~~~~~~~~~-------~~~---~~d~~~l~~~l~~~~~~ 267 (434)
++..+++.... ..+++|+...++|.++...+.. .|.....++..+. ..+ ..|+++|++.++..
T Consensus 116 A~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~--- 192 (423)
T TIGR00713 116 ATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY--- 192 (423)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHc---
Confidence 99998886431 2468999999999987654332 1111111111100 000 12789999988742
Q ss_pred CCCeeEEEEe-cCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEE
Q 013892 268 GITVRALVVI-NPGNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSF 345 (434)
Q Consensus 268 g~~~~~i~l~-~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i 345 (434)
+.++++|++. .|+| +|.+.+ ++.+++|.++|++||+++|+||+|.++.++.. +. . . ..+ ..+| +
T Consensus 193 ~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~--~~-~-~---~~~-~~pD--i--- 258 (423)
T TIGR00713 193 GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALG--GA-Q-E---YFG-VEPD--L--- 258 (423)
T ss_pred CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcc--hh-H-H---HhC-CCcc--h---
Confidence 1267888887 8889 898888 58999999999999999999999998744321 11 1 1 111 2355 2
Q ss_pred ecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH----hhcccCCchHHHHHHHHHcCCC---CCChHHHHHHHHHHHHH
Q 013892 346 QSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPP---KVGDESYESYCAERDGI 418 (434)
Q Consensus 346 ~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~r~~l 418 (434)
-+|||++ | .|+|+||+++ ++++++.+... ...+.+.+++++.++...++.. ...+...+.....++.+
T Consensus 259 ~t~sK~l-~-~G~pig~v~~---~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l 333 (423)
T TIGR00713 259 TTLGKII-G-GGLPVGAFGG---RREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGL 333 (423)
T ss_pred hhhhhhh-c-CCCceeeeeE---HHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 2799999 6 7999999987 88999888632 2245578899999877777532 22333444444444444
Q ss_pred HHHHHH
Q 013892 419 LSSLAR 424 (434)
Q Consensus 419 ~~~L~~ 424 (434)
.+.+++
T Consensus 334 ~~~~~~ 339 (423)
T TIGR00713 334 SEVLED 339 (423)
T ss_pred HHHHHh
Confidence 444433
No 192
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.82 E-value=7e-18 Score=168.84 Aligned_cols=194 Identities=14% Similarity=0.195 Sum_probs=148.7
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcCCCCEE
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGI 218 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~V 218 (434)
++++.++++.+.+... ...++ ....+|++++|+++ | .+++++++|+++|+.+++.++ + ++||+|
T Consensus 12 ~~~~e~~~~~~~l~~~----~~~~g--~~~~~le~~la~~~----g----~~~~v~~~sgt~al~lal~al~~-~~Gd~V 76 (379)
T PRK11658 12 MGDEELAAVKEVLRSG----WITTG--PKNQALEQAFCQLT----G----NQHAIAVSSATAGMHITLMALGI-GPGDEV 76 (379)
T ss_pred CCHHHHHHHHHHHHcC----CccCC--HhHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHcCC-CCCCEE
Confidence 3566777777777652 22233 34789999999998 2 246888999999999999998 6 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.++|..+...+...|++++.++++.+ +|.+|++.+++++++ ++++|+ |.||+|...+ +++|.++
T Consensus 77 iv~~~~~~~~~~~~~~~G~~~v~vd~~~~-~~~~d~~~l~~~i~~------~tkav~---~~~~~G~~~d---~~~i~~~ 143 (379)
T PRK11658 77 ITPSLTWVSTLNMIVLLGATPVMVDVDRD-TLMVTPEAIEAAITP------RTKAII---PVHYAGAPAD---LDAIRAI 143 (379)
T ss_pred EECCCcHHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhccc------CCeEEE---EeCCCCCcCC---HHHHHHH
Confidence 99999999999999999999999998754 578999999999976 788887 5567999877 8889999
Q ss_pred HHHcCCEEEEccCCCC-CccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQE-NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 299 ~~~~~~~li~Deay~~-~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
|+++|++||+|++|.. ..+.+. . ++. .. +.+.||++.- .+++.++|+++. .++++.+++.
T Consensus 144 a~~~gi~vi~D~a~a~g~~~~~~--~---------~g~--~g---~~~~Sf~~~K-~l~~g~GG~v~~--~~~~~~~~~~ 204 (379)
T PRK11658 144 GERYGIPVIEDAAHAVGTYYKGR--H---------IGA--RG---TAIFSFHAIK-NITCAEGGLVVT--DDDELADRLR 204 (379)
T ss_pred HHHcCCeEEEECCCccCCeECCe--e---------cCC--CC---CEEEeCCCCC-cCcccCceEEEE--CCHHHHHHHH
Confidence 9999999999999984 333321 0 110 11 2355666554 456788999864 3688888887
Q ss_pred HHh
Q 013892 378 KVA 380 (434)
Q Consensus 378 ~~~ 380 (434)
.++
T Consensus 205 ~~~ 207 (379)
T PRK11658 205 SLK 207 (379)
T ss_pred HHH
Confidence 654
No 193
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.82 E-value=3.1e-18 Score=172.93 Aligned_cols=258 Identities=16% Similarity=0.142 Sum_probs=172.4
Q ss_pred CCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
..++||..+ -..-+|++++++.+.+..... ...+. ..+....+++.+.+..+ .+.+++++++++|
T Consensus 40 ~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~--~~~~~----~~~~~~~l~~~l~~~~~----~~~~~~~~sGseA 109 (403)
T PRK05093 40 KEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWH--ISNVF----TNEPALRLAKKLIDATF----AERVFFANSGAEA 109 (403)
T ss_pred CEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCc--ccCcc----CCHHHHHHHHHHHhhCC----CCEEEEeCchHHH
Confidence 345666543 224688899999888875321 11111 11223344455444322 3589999999999
Q ss_pred HHHHHHHHhc-------CCCCEEEEcCCCChhHHHH-HHHcCC------------eEEEEecCCCCCCCCCHHHHHHHHH
Q 013892 203 VHMMMQLLIR-------SENDGILCPIPQYPLYSAS-IALHGG------------TLVPYYLDEATGWGLETSEVKKQLE 262 (434)
Q Consensus 203 l~~~l~~l~~-------~~gd~Vlv~~p~y~~~~~~-~~~~g~------------~~~~~~~~~~~~~~~d~~~l~~~l~ 262 (434)
+..+++.... ...++|+..+-+|.+.... +...|. .++.++ ..|++.+++.+.
T Consensus 110 ~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~ 182 (403)
T PRK05093 110 NEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP-------FNDLAAVKAVID 182 (403)
T ss_pred HHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC-------CCCHHHHHHHhc
Confidence 9999886521 1235788888777765432 222111 112221 127899988886
Q ss_pred HHHhcCCCeeEEEEecCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCc
Q 013892 263 AAKAKGITVRALVVINPGNPTGQVL--AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDI 340 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 340 (434)
+ ++++|+++ |.||+|.++ +.+.+++|+++|++||+++|+||+|.++.+.+. +.+... .+ ..++
T Consensus 183 ~------~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~~--~~---~~pd- 247 (403)
T PRK05093 183 D------HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD--LFAYMH--YG---VTPD- 247 (403)
T ss_pred C------CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--chhhhh--cC---CCCC-
Confidence 4 67777766 888888876 889999999999999999999999999766553 222111 11 1244
Q ss_pred eEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH-hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHH
Q 013892 341 SLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGIL 419 (434)
Q Consensus 341 ~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 419 (434)
+.||||++ + +|+|+||+++ ++++++.+... ...+.+.+++.|.++...|+... ..+.++.++++++.+.
T Consensus 248 ----i~s~sK~l-~-~G~rig~vv~---~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~-~~~~~~~~~~~~~~l~ 317 (403)
T PRK05093 248 ----ILTSAKAL-G-GGFPIGAMLT---TAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN-TPEVLEGVKARRQRFV 317 (403)
T ss_pred ----EEEecccc-c-CCcceEEEEE---cHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHH
Confidence 45899999 5 8999999988 88998888653 33455788889988877554321 1356789999999999
Q ss_pred HHHHHHHH
Q 013892 420 SSLARRAK 427 (434)
Q Consensus 420 ~~L~~~~~ 427 (434)
+.|++...
T Consensus 318 ~~L~~~~~ 325 (403)
T PRK05093 318 DGLQKINQ 325 (403)
T ss_pred HHHHHHHh
Confidence 99988753
No 194
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.81 E-value=1.6e-18 Score=173.95 Aligned_cols=253 Identities=15% Similarity=0.145 Sum_probs=171.3
Q ss_pred CCCHHHHHHHHHHHHcCCCC--CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc----
Q 013892 139 LFSADSIERAWQILDQIPGR--ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---- 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~---- 212 (434)
..++.|++++.+.+.+...+ ..+.|+ ..+...++++++++.... +. .++++|++|+|+++++..+++.+..
T Consensus 10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~~-~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~ 86 (382)
T TIGR03403 10 MLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKGI-NA-RDLDDIIITSCATESNNWVLKGVYFDEIL 86 (382)
T ss_pred CCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHHc-Cc-CCCCeEEEeCCHHHHHHHHHHHHHHhhcc
Confidence 46778999998888753221 223344 345778999998887532 31 2678999999999999999987621
Q ss_pred CC-CCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCC
Q 013892 213 SE-NDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (434)
Q Consensus 213 ~~-gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~ 288 (434)
++ +++|+++...|+.+... ++..|++++.++++++ +.+|++.|++++++ +++++++++|+||||.+++
T Consensus 87 ~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~--g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~ 158 (382)
T TIGR03403 87 KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQ--GTITAEQVREAITE------KTALVSVMWANNETGMIFP 158 (382)
T ss_pred cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCC--CCCCHHHHHHhccc------CCeEEEEEcccCCCccccC
Confidence 34 57899998777765544 5567999999998743 47899999999876 7899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecC
Q 013892 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (434)
Q Consensus 289 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~ 368 (434)
+++|.++|+++|+++++|+++..... + ..+ .+...| +++.|++|.+ |.+|+ |++.+..
T Consensus 159 ---~~~I~~la~~~g~~~ivD~a~~~g~~----~-~~~-------~~~~~D---~~~~s~~K~~-gp~G~--g~l~vr~- 216 (382)
T TIGR03403 159 ---IKEIGEICKERGVLFHTDAVQAIGKI----P-VDV-------QKAGVD---FLSFSAHKFH-GPKGV--GGLYIRK- 216 (382)
T ss_pred ---HHHHHHHHHHcCCEEEEechhhcCCC----c-cCc-------cccCCC---EEEEcchhhC-CCCce--EEEEECC-
Confidence 77899999999999999999763211 0 111 111133 7788999965 77784 6665411
Q ss_pred CHHHHHHHH---HHh-hcccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHH
Q 013892 369 SAEVREQIY---KVA-SVNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 369 ~~~~~~~l~---~~~-~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
...+...+. ... ...+.++..++.++...++.. +..+...+++++.++.+.+.|++
T Consensus 217 ~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~ 277 (382)
T TIGR03403 217 GVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLE 277 (382)
T ss_pred CCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 111101110 001 123457777776666665421 22445566777777777777765
No 195
>PLN02509 cystathionine beta-lyase
Probab=99.81 E-value=4e-18 Score=173.01 Aligned_cols=222 Identities=17% Similarity=0.203 Sum_probs=159.3
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHc
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALH 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~----~~~~ 235 (434)
...|... |.+ .++++++++.+..| .++.++++|+++++..++. ++ ++||+|+++.|.|+.+... +...
T Consensus 124 ~~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il~-ll-~~GD~VI~~~~~y~~t~~ll~~~l~~~ 195 (464)
T PLN02509 124 PYDYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVTH-LI-KNGEEIVAGDDVYGGSDRLLSQVVPRS 195 (464)
T ss_pred CCccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHHH-Hh-CCCCEEEEcCCchhhHHHHHHHHHHHC
Confidence 4567665 665 57788887777654 4566777777889977764 55 7999999999999987643 4567
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
|++++.++. .|++++++++++ ++++|++++|+||||.+. ++++|+++|+++|+++|+|++|...
T Consensus 196 G~~v~~vd~-------~d~e~l~~ai~~------~TklV~lesPsNPtG~i~---Dl~~I~~lAk~~g~~lIVD~A~a~~ 259 (464)
T PLN02509 196 GVVVKRVNT-------TNLDEVAAAIGP------QTKLVWLESPTNPRQQIS---DIRKIAEMAHAQGALVLVDNSIMSP 259 (464)
T ss_pred CeEEEEeCC-------CCHHHHHHhCCc------CCeEEEEECCCCCCCCHH---HHHHHHHHHHHcCCEEEEECCcccc
Confidence 998888753 368889888866 799999999999999974 4999999999999999999998764
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~ 394 (434)
..... . .++ .| ++++|++|.+.|..+.-+|++++ .++.+.+.+...+. ...+.++.. +
T Consensus 260 ~~~~p--------l--~~g---aD---ivv~S~tK~l~G~gdv~gG~v~~--~~~~l~~~~~~~~~~~g~~l~p~~---A 318 (464)
T PLN02509 260 VLSRP--------L--ELG---AD---IVMHSATKFIAGHSDVMAGVLAV--KGEKLAKEVYFLQNSEGSGLAPFD---C 318 (464)
T ss_pred ccCCh--------h--hcC---Cc---EEEecCcccccCCCccceeEEEe--ccHHHHHHHHHHHHhcCCCcCHHH---H
Confidence 33211 0 111 23 88999999986534455787764 25556666554443 222334443 4
Q ss_pred HHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
..++..-+.+....++..++...+.+.|+++.
T Consensus 319 ~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p 350 (464)
T PLN02509 319 WLCLRGIKTMALRIEKQQENARKIAMYLSSHP 350 (464)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44444445667788888888999999888764
No 196
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=4e-18 Score=171.53 Aligned_cols=213 Identities=14% Similarity=0.125 Sum_probs=156.6
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~ 244 (434)
...|.+.+|++. | .+..+++++++.|+.+++.+++ .+||+|+++.++|...... +...|+++..+..
T Consensus 63 v~~lE~~la~le----g----~~~av~~~SG~aAi~~al~all-~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 63 LAAFEQKLAELE----G----GVGAVATASGQAAIMLAVLNIC-SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHhc-CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 567888888876 2 2457889999999999999888 7999999999999866555 6778999988853
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
.+|++.++++|++ ++|+|++.+|+||++.+.+ +++|+++|+++|+++|+|++|..-.+..
T Consensus 134 ------~~d~~~l~~~I~~------~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~~~----- 193 (432)
T PRK06702 134 ------NLTADEIVALAND------KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYLCQ----- 193 (432)
T ss_pred ------CCCHHHHHHhCCc------CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhhCC-----
Confidence 4689999999987 8999999999999999999 9999999999999999999986311111
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCC----CCCcee-----EEEEEecCCHHHH---------------------H
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYG----ECGKRG-----GYMEVTGFSAEVR---------------------E 374 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g----~~G~R~-----G~~~~~~~~~~~~---------------------~ 374 (434)
.+ .++ -| |+++|+||.++| +.|.++ +|... .+.+++ .
T Consensus 194 ----pl-~~G---AD---Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 260 (432)
T PRK06702 194 ----AF-EHG---AN---IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNG--KYPELVEPDPSYHGVSYVQNFGAAAYIV 260 (432)
T ss_pred ----hh-hcC---CC---EEEEccccccCCCcceeceEEEeCCCcccccc--cccccccccccccccchhhccchhhHHH
Confidence 01 111 23 899999995544 444444 33321 112222 1
Q ss_pred HH--HHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 375 QI--YKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 375 ~l--~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+. ...+....+.+++..+++...|+ .++...++..++...+.+.|+++.
T Consensus 261 ~~~~~~~~~~g~~~sp~~a~l~~rgL~---Tl~lR~~r~~~Na~~la~~L~~~p 311 (432)
T PRK06702 261 KARVQLLRDYGNCMSPFNAYISNIGLE---TLHLRMERHSENALAVAKWLADHE 311 (432)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHhccC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 11 12223455778887777666664 456778888899999999998765
No 197
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.81 E-value=4.2e-18 Score=170.55 Aligned_cols=254 Identities=17% Similarity=0.146 Sum_probs=176.3
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC-CE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g-d~ 217 (434)
.-++.+++++.+.+++... ++ ..+..+++..+++++.+..+ .+.+++++++++++..+++.....+| ++
T Consensus 45 ~~~p~v~~a~~~~~~~~~~-----~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a~~~A~~~a~~~~g~~~ 114 (377)
T PRK02936 45 HCHPTVTKAVQEQLDDIWH-----VS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAEANEAALKLARKHTGKSK 114 (377)
T ss_pred CCCHHHHHHHHHHHHhccc-----cc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHHHHHHHHHHHHhcCCCe
Confidence 4678899999999876321 11 22356889999999976543 25799999999999999986431234 67
Q ss_pred EEEcCCCChhHHH-HHHHcCCeEE---EEecCCCCCC--CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHH
Q 013892 218 ILCPIPQYPLYSA-SIALHGGTLV---PYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEE 290 (434)
Q Consensus 218 Vlv~~p~y~~~~~-~~~~~g~~~~---~~~~~~~~~~--~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~ 290 (434)
|++.+++|+.... .+...+.... ..++..+..+ ..|++.+++.+.+ ++++|++..+++++|.. .+.+
T Consensus 115 vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~ii~e~i~~~~G~~~~~~~ 188 (377)
T PRK02936 115 IVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE------EVAAVMLEVVQGEGGVIPADPA 188 (377)
T ss_pred EEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC------CeEEEEEecccCCCCCccCCHH
Confidence 9999999885432 2222232110 1111111000 1278899988865 78888888889999887 5789
Q ss_pred HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH
Q 013892 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (434)
Q Consensus 291 ~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~ 370 (434)
.+++|.++|++||+++|+||+|.++.+.+. +..+. .++ ..+| ++ +|||++ + +|+|+||+++ ++
T Consensus 189 ~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~--~~~~~----~~~-~~~d--i~---t~sK~l-~-~G~~ig~v~~---~~ 251 (377)
T PRK02936 189 FLQEVQTLCKKFGALLIIDEVQTGIGRTGT--LFAYE----QFG-LDPD--IV---TVAKGL-G-NGIPVGAMIG---KK 251 (377)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcCch--hhHHH----hhC-CCCc--EE---EEcccc-c-CCCccEEEEE---cH
Confidence 999999999999999999999998655443 22211 111 2245 22 689999 6 7999999987 88
Q ss_pred HHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 371 EVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 371 ~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++++.+..... .+.+.++++|.++..+++..+ .++.+++++++++.+.+.|++..
T Consensus 252 ~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~~~ 307 (377)
T PRK02936 252 ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIK-QPSFLEEVQEKGEYFLQKLQEEL 307 (377)
T ss_pred HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHH
Confidence 99888864432 445789999999888886431 13566788888888888888753
No 198
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.81 E-value=4.4e-18 Score=170.18 Aligned_cols=195 Identities=17% Similarity=0.229 Sum_probs=144.7
Q ss_pred CCCCCHHHHHHHHHHHHcCCC-CCCCCCCC----CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh
Q 013892 137 QGLFSADSIERAWQILDQIPG-RATGAYSH----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~-~~~~~Y~~----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 211 (434)
+.+.|+.+++++.+.+.+... .....|.. ..+..++|+.+++++ |.+ ..++|++|+|+++++..++..++
T Consensus 9 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~g~t~al~~~~~~~~ 83 (376)
T TIGR01977 9 TYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF----NAP-SSAHVVFTNNATTALNIALKGLL 83 (376)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh----CcC-CCCeEEEeCCHHHHHHHHHHhcc
Confidence 445688899998888876431 01223443 245678888888887 321 34589999999999999999987
Q ss_pred cCCCCEEEEcCCCChhHHH----HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCC
Q 013892 212 RSENDGILCPIPQYPLYSA----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (434)
Q Consensus 212 ~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~ 287 (434)
++||+|+++.++|+.+.. .++..|++++.++.+. ++.+|++++++++++ +++++++++|+||||.++
T Consensus 84 -~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~------~~~~v~~~~~~n~tG~~~ 154 (376)
T TIGR01977 84 -KEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKT------NTKLIVVSHASNVTGTIL 154 (376)
T ss_pred -CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCC------CCeEEEEECCCCCccccC
Confidence 799999999999987653 4455699999998764 457899999999865 789999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+ +++|.++|+++|+++|+|+++......- .+ .. ...| +++.|..|.+.|..| .|.+++
T Consensus 155 ~---~~~i~~l~~~~~~~livD~a~~~g~~~~-----~~----~~---~~~D---~~~~s~~K~l~~p~g--~g~l~~ 212 (376)
T TIGR01977 155 P---IEEIGELAQENGIFFILDAAQTAGVIPI-----DM----TE---LAID---MLAFTGHKGLLGPQG--TGGLYI 212 (376)
T ss_pred C---HHHHHHHHHHcCCEEEEEhhhccCccCC-----Cc----hh---cCCC---EEEecccccccCCCC--ceEEEE
Confidence 9 7788999999999999999997532211 11 11 1133 778899998744334 455544
No 199
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.81 E-value=3.6e-18 Score=173.30 Aligned_cols=254 Identities=15% Similarity=0.084 Sum_probs=158.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCCC--CCCC-CCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC
Q 013892 139 LFSADSIERAWQILDQIPGRAT--GAYS-HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~--~~Y~-~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g 215 (434)
.+|+.|++++...+......+. ..|. ...-...+.+...+.+.+.+|. +..+|++++| ++++..++..++ ++|
T Consensus 36 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~i~~~sg-t~al~~~l~~l~-~~g 111 (416)
T PRK00011 36 FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--EYANVQPHSG-SQANAAVYFALL-KPG 111 (416)
T ss_pred cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--CceeeecCCc-hHHHHHHHHHhc-CCC
Confidence 3588899887665532210001 1111 1111222323223344444553 4455666665 678999999988 799
Q ss_pred CEEEEcCCCChhHHH-----HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHH
Q 013892 216 DGILCPIPQYPLYSA-----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (434)
Q Consensus 216 d~Vlv~~p~y~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~ 290 (434)
|+|+++.|+|..+.. .+...|++++.++++.+ ++.+|++++++.+++. ++++|++++++|| ...+
T Consensus 112 d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~-----~~k~v~~~~~~~~--~~~~-- 181 (416)
T PRK00011 112 DTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEE-TGLIDYDEVEKLALEH-----KPKLIIAGASAYS--RPID-- 181 (416)
T ss_pred CEEEEeccccCCccccccccccccceeeEeecCcCcc-cCCcCHHHHHHHHHhc-----CCCEEEECCCcCC--CccC--
Confidence 999999999986532 12344678888887643 4789999999999753 6888888766554 4445
Q ss_pred HHHHHHHHHHHcCCEEEEccCCCC-CccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC
Q 013892 291 NQRAIVDFCKKEGLVLLADEVYQE-NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (434)
Q Consensus 291 ~l~~i~~~~~~~~~~li~Deay~~-~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~ 369 (434)
+++|.++|+++|+++|+|++|.. +.+.+. ... .+. ..| +++.|+||.+ +|.|+||+++ .+
T Consensus 182 -~~~I~~la~~~~~~livD~a~~~g~~~~g~--~~~------~~~--~~d---i~~~S~~K~l---~g~~gg~i~~--~~ 242 (416)
T PRK00011 182 -FKRFREIADEVGAYLMVDMAHIAGLVAAGV--HPS------PVP--HAD---VVTTTTHKTL---RGPRGGLILT--ND 242 (416)
T ss_pred -HHHHHHHHHHcCCEEEEECcchhcccccCc--cCC------CCC--CCc---EEEecCCcCC---CCCCceEEEe--CC
Confidence 89999999999999999999753 222221 110 011 123 7799999977 5899999976 34
Q ss_pred HHHHHHHHHHhhcc-cC-CchHHHHHHHHHc-CC-CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 370 AEVREQIYKVASVN-LC-SNISGQILASLVM-SP-PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 370 ~~~~~~l~~~~~~~-~~-~~~~~q~~~~~~l-~~-~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++++.+.+....+ .+ +......++...+ .. .+.+++..++++++++.+.+.|++.
T Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 302 (416)
T PRK00011 243 EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER 302 (416)
T ss_pred HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 78888887765422 12 2222222211111 11 1234667788888888888888764
No 200
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.80 E-value=5e-18 Score=169.74 Aligned_cols=194 Identities=17% Similarity=0.249 Sum_probs=146.2
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
.++.++++.+.+.... .| |...+++++++++++.+| .+++++++|+++++.+++..+..++||+|++
T Consensus 10 ~~~~~~~~~~~l~~~~-----~~----g~~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv 76 (375)
T PRK11706 10 VGTELDYIQQAMSSGK-----LC----GDGGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPGDEVIM 76 (375)
T ss_pred CHHHHHHHHHHHHcCC-----cc----CCCHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCCCEEEE
Confidence 4555667777766421 12 233566777777666555 3689999999999998877663279999999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
+.|+|+.+...+...|++++.++++++ +|.+|++++++++++ ++++|+++| ++|...+ +++|.++|+
T Consensus 77 ~~~t~~~~~~~~~~~G~~~v~~d~d~~-~~~~d~~~le~~i~~------~tk~i~~~~---~~G~~~~---~~~i~~la~ 143 (375)
T PRK11706 77 PSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIEAAITP------KTRAIVPVH---YAGVACE---MDTIMALAK 143 (375)
T ss_pred CCCCcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcCC------CCeEEEEeC---CCCCccC---HHHHHHHHH
Confidence 999999999999999999999999865 588999999999876 789998764 6898876 789999999
Q ss_pred HcCCEEEEccCCCCCc-cCCCCCccchHHHHhhhCCCCCCceEEEEecCC--CCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 301 KEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 301 ~~~~~li~Deay~~~~-~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~S--K~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
++|++||+|++|+.+. +++. +..+ + .+ +.+.||. |.+ + +|.++++++. ++++.+++.
T Consensus 144 ~~~i~vIeD~a~a~g~~~~~~-~~g~-------~----~~---~~~~Sf~~~K~l-~-~g~gG~~~~~---~~~~~~~~~ 203 (375)
T PRK11706 144 KHNLFVVEDAAQGVMSTYKGR-ALGT-------I----GH---IGCFSFHETKNY-T-AGEGGALLIN---DPALIERAE 203 (375)
T ss_pred HcCCEEEEECccccccccCCe-eeec-------C----cC---EEEEeCCCCccc-c-ccCCeEEEEC---CHHHHHHHH
Confidence 9999999999998765 3321 1111 1 12 3334444 999 4 6998888854 889988777
Q ss_pred HHh
Q 013892 378 KVA 380 (434)
Q Consensus 378 ~~~ 380 (434)
.++
T Consensus 204 ~~~ 206 (375)
T PRK11706 204 IIR 206 (375)
T ss_pred HHH
Confidence 665
No 201
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.80 E-value=1.7e-17 Score=165.51 Aligned_cols=257 Identities=14% Similarity=0.096 Sum_probs=171.1
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc---CCCC
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---SEND 216 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~---~~gd 216 (434)
..+.+++++.+.+..... ....| .|..++.+.+.+.+.+.+| .+.+++++++|+++++..++..+.. .+++
T Consensus 32 ~~~~~~~a~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~ 105 (371)
T PRK13520 32 PHPIARKAHEMFLETNLG-DPGLF---PGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEKP 105 (371)
T ss_pred chHHHHHHHHHHHhcCCC-CcccC---ccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCCc
Confidence 356677888777765322 12223 2344544555555555556 3456789999999999998877752 1478
Q ss_pred EEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHH
Q 013892 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (434)
Q Consensus 217 ~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 296 (434)
+|++.++.|..+...++..|++++.++.+. ++.+|+++|++++++ ++++|++++++|+||.+.+ +++|.
T Consensus 106 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~vi~~~~~~~tG~~~~---l~~I~ 174 (371)
T PRK13520 106 NIVVPESAHFSFDKAADMLGVELRRAPLDD--DYRVDVKAVEDLIDD------NTIGIVGIAGTTELGQVDP---IPELS 174 (371)
T ss_pred eEEecCcchHHHHHHHHHcCceEEEecCCC--CCcCCHHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHH
Confidence 999999999999999999999999998764 357899999999987 6778888889999999998 88999
Q ss_pred HHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHH
Q 013892 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (434)
Q Consensus 297 ~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 376 (434)
++|+++|+++++|++|..+...-......+ +....++. .+..|..| | +++|.++|++++ .++++++.+
T Consensus 175 ~l~~~~g~~livD~a~~~~~~~~~~~~~~~-------~~~~~~vd-~~~~s~~K-~-~~a~~~~G~~~~--~~~~~~~~l 242 (371)
T PRK13520 175 KIALENGIFLHVDAAFGGFVIPFLDDPPNF-------DFSLPGVD-SITIDPHK-M-GLAPIPAGGILF--RDESYLDAL 242 (371)
T ss_pred HHHHHcCCCEEEEecchhHHHHhhcCCCCc-------cccCCCCc-eEEECCcc-c-cCccCCceEEEE--cCHHHHHhh
Confidence 999999999999999987543211000000 00012222 33347778 5 557899998875 366677766
Q ss_pred HHHhhc---------ccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 377 YKVASV---------NLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 377 ~~~~~~---------~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
...... ....+.....++...++. .+..++.+++..+.++.+.+.|++.
T Consensus 243 ~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~ 302 (371)
T PRK13520 243 AVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER 302 (371)
T ss_pred cccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 422110 011222334444444432 1223556777778888888877764
No 202
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=8.4e-18 Score=170.21 Aligned_cols=214 Identities=16% Similarity=0.163 Sum_probs=155.2
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhH----HHHHHHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~ 244 (434)
...|.+.+|++. | .+..++++|+++++..++..++ ++||+|+++.+.|+.. ...++..|++++.++.
T Consensus 66 ~~~Le~~lA~le----g----~~~al~~~sG~~Ai~~al~~ll-~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 66 TDVFEKRIAALE----G----GIGALAVSSGQAAITYSILNIA-SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 566777777775 3 3577889999999999998887 7999999999988753 3456678999998875
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
.|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..... ..
T Consensus 137 -------~d~e~l~~ai~~------~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~~~-----~~ 195 (431)
T PRK08248 137 -------SDPENFEAAITD------KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASPYL-----LR 195 (431)
T ss_pred -------CCHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcccc-----CC
Confidence 278999998876 7999999999999999999 78999999999999999999863111 11
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHH-------------------------------H
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV-------------------------------R 373 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~-------------------------------~ 373 (434)
++ .++ .| |+++|++|.+ |.+|.++|++++......+ .
T Consensus 196 pl-----~~g---aD---ivv~S~tK~l-gg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (431)
T PRK08248 196 PI-----EHG---AD---IVVHSATKFI-GGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYIT 263 (431)
T ss_pred hh-----HcC---CC---EEEEcCcccc-CCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHH
Confidence 11 111 23 7889999999 6699999998763211110 0
Q ss_pred HHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 374 EQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 374 ~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+....... ...+.++.. +..+++.-+.+....++..++...+.+.|+++..
T Consensus 264 ~~~~~~~~~~G~~l~p~~---a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~ 315 (431)
T PRK08248 264 KARVQLLRDLGAALSPFN---SFLLLQGLETLHLRMERHSENALAVAKFLEEHEA 315 (431)
T ss_pred HHHHHHHHhcCCCCCHHH---HHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 11111111 233334443 3455555566777888889999999999987753
No 203
>PRK05968 hypothetical protein; Provisional
Probab=99.80 E-value=9.3e-18 Score=168.30 Aligned_cols=210 Identities=17% Similarity=0.132 Sum_probs=151.4
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhH----HHHHHHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~ 244 (434)
..+|++.+|+++ | .+..+++++++.++..++..++ .+||+|+++.+.|... ...+...|++++.++.
T Consensus 65 ~~~le~~lA~l~----g----~~~av~~~sG~~Ai~~al~al~-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 65 VRAFEEMLAKLE----G----AEDARGFASGMAAISSTVLSFV-EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 678888888886 3 1234444556689998888887 7999999999999863 3456678999988863
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
. |++++++++ + ++++|++++|+||++ +..++++|+++|+++|+++|+|++|....+...
T Consensus 136 ~-------d~~~l~~~i-~------~tklV~ie~pt~~~~---~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p---- 194 (389)
T PRK05968 136 R-------DEEAVAKAL-P------GAKLLYLESPTSWVF---ELQDVAALAALAKRHGVVTMIDNSWASPVFQRP---- 194 (389)
T ss_pred C-------CHHHHHHhc-c------cCCEEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCcchhccCc----
Confidence 2 788888887 3 688999988777665 446799999999999999999999987543321
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh--cccCCchHHHHHHHHHcCCCC
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLCSNISGQILASLVMSPPK 402 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~ 402 (434)
+ .++ .| ++++|++|.++|..+.++|+++. ++++++++..... ...+.+.+.++++...| +
T Consensus 195 -~-----~~g---~D---ivv~S~tK~l~g~~~~~gG~i~~---~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L---~ 256 (389)
T PRK05968 195 -I-----TLG---VD---LVIHSASKYLGGHSDTVAGVVAG---SKEHIARINAEAYPYLGAKLSPFEAWLLLRGL---R 256 (389)
T ss_pred -h-----hcC---Cc---EEEeeccccccCCCCeEEEEEEE---CHHHHHHHHHHHHHhCCCCCChHHHHHHHccc---C
Confidence 1 111 23 78889999995433468999876 8888888876543 33345555555544444 4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.+....++..++...+.+.|+++.
T Consensus 257 tl~~r~~~~~~~a~~la~~L~~~p 280 (389)
T PRK05968 257 TLPLRMKAHEASALEIARRLKAHP 280 (389)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 456677777777778888887653
No 204
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.79 E-value=4.8e-17 Score=160.07 Aligned_cols=264 Identities=17% Similarity=0.169 Sum_probs=183.0
Q ss_pred CCCccccccc---CCCCCHHHHHHHHHHHHcCCCCCCCC----CCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCCh
Q 013892 127 HPSILDRSET---QGLFSADSIERAWQILDQIPGRATGA----YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGA 199 (434)
Q Consensus 127 ~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~----Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~ 199 (434)
.+.++||++| +..-.+++++++.+.+++.+. +..+ ++...-+.+|.+.+|+|+ | .+..+++++|-
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~-g~~gsR~i~G~~~~h~~LE~~lA~f~----g---~e~al~f~SGy 109 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGV-GAGGSRLISGTSDLHVELEEELADFL----G---AEAALLFSSGF 109 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCC-CCCCcCcccCCcHHHHHHHHHHHHHh----C---CCcEEEEcccc
Confidence 4668899888 667788999999999998543 2222 223333455666666665 5 33456666666
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC
Q 013892 200 SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (434)
Q Consensus 200 ~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p 279 (434)
. +...++.+|+ +++|.|+...-.|.+..+.++..+++++.+.. .|++.|++.+++.+..+.+.+.|++...
T Consensus 110 ~-AN~~~i~~l~-~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~IvtegV 180 (388)
T COG0156 110 V-ANLGLLSALL-KKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEGV 180 (388)
T ss_pred h-hHHHHHHHhc-CCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEecc
Confidence 5 5555666777 68999999999999999999999999999874 4899999999886544333455555566
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce
Q 013892 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (434)
Q Consensus 280 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R 359 (434)
-.-.|.+-+ +++|++++++|+.++++||+|+-.++++.+. .....++-...+ ..|+++||||.| | --
T Consensus 181 fSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~Gr-----G~~e~~g~~~~~-vdi~~gTlsKAl-G---s~ 247 (388)
T COG0156 181 FSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGR-----GLAEHFGLEPEE-VDIIVGTLGKAL-G---SS 247 (388)
T ss_pred ccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCc-----cHHHHhCCCCcc-ceEEEEEchhhh-c---cc
Confidence 666898888 9999999999999999999999999997542 222222211122 258999999999 3 44
Q ss_pred eEEEEEecCCHHHHHHHHHHhh--ccc-CCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHH
Q 013892 360 GGYMEVTGFSAEVREQIYKVAS--VNL-CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 360 ~G~~~~~~~~~~~~~~l~~~~~--~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
+||+.+ +..+++.+..... .++ +.|+....++...++.-+...+.+++.+++...+.+.++
T Consensus 248 Gg~v~g---~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~ 311 (388)
T COG0156 248 GGYIAG---SAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLK 311 (388)
T ss_pred CceeeC---cHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 689876 9999999987644 333 334444444455554333334555555555555553333
No 205
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=2.6e-17 Score=166.50 Aligned_cols=214 Identities=17% Similarity=0.149 Sum_probs=151.9
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----cCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~~~~ 244 (434)
..+|++.+|++. | .+..++++++++++..++.+++ ++||+|+++.+.|......+.. .|+++..++
T Consensus 60 ~~~Le~~lA~l~----g----~~~~l~~ssG~~Ai~~al~al~-~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d- 129 (425)
T PRK06084 60 NDVLEQRVAALE----G----GVGALAVASGMAAITYAIQTIA-EAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA- 129 (425)
T ss_pred HHHHHHHHHHHh----C----CCceeEehhHHHHHHHHHHHHh-CCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC-
Confidence 567888888875 3 2356677788899999999988 7999999999999854444432 466666554
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
..|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 130 ------~~d~e~le~ai~~------~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~~----- 189 (425)
T PRK06084 130 ------HDDIAALEALIDE------RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLCR----- 189 (425)
T ss_pred ------CCCHHHHHHHhcc------CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 2389999999977 7999999999999999998 8999999999999999999998533211
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH---HHH-------------------------HHH
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA---EVR-------------------------EQI 376 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~---~~~-------------------------~~l 376 (434)
+ + .++ .| |+++|++|.+ |.+|.++|.+++.+... +.. ..+
T Consensus 190 p----~-~~g---aD---ivv~S~tK~l-~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 257 (425)
T PRK06084 190 P----F-EHG---AD---IVVHSLTKYI-GGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFI 257 (425)
T ss_pred h----h-hcC---CC---EEEECchhcc-cccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHH
Confidence 0 1 111 23 8899999999 55889999877632110 100 000
Q ss_pred ---H-HHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 377 ---Y-KVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 377 ---~-~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
. ... ......++.. +..+++.-+.+....++..++...+.+.|+.+..
T Consensus 258 ~~~~~~~~~~~g~~l~~~~---a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~ 310 (425)
T PRK06084 258 GRCRVVPLRNMGAALSPFN---AFLILQGLETLALRMERHTENALKVARYLQQHPQ 310 (425)
T ss_pred HHHHHHHHHhcCCCCCHHH---HHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 0 001 1233444443 3445555566778888889999999999987653
No 206
>PRK05939 hypothetical protein; Provisional
Probab=99.79 E-value=1.3e-17 Score=167.34 Aligned_cols=211 Identities=14% Similarity=0.149 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHH---HHHHHcCCeEEEEecCCC
Q 013892 171 GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEA 247 (434)
Q Consensus 171 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~~~~~~~ 247 (434)
.|.+.++++. | ....++++ +++.|+..++..++ ++||+|+++.+.|+.+. ..++..|++++.++..
T Consensus 51 ~lE~~la~le----g---~~~~v~~s-sG~~Ai~~~l~all-~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-- 119 (397)
T PRK05939 51 ALEAKITKME----G---GVGTVCFA-TGMAAIAAVFLTLL-RAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-- 119 (397)
T ss_pred HHHHHHHHHh----C---CCeEEEeC-CHHHHHHHHHHHHc-CCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC--
Confidence 7888888775 3 12344444 45899999998888 79999999999997543 3466789999988752
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchH
Q 013892 248 TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (434)
Q Consensus 248 ~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~ 327 (434)
|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.....-+.
T Consensus 120 -----d~e~l~~~l~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~~------- 178 (397)
T PRK05939 120 -----DVQNVAAAIRP------NTRMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPWLFRP------- 178 (397)
T ss_pred -----CHHHHHHhCCC------CCeEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCcccccccCc-------
Confidence 78999999876 8999999999999999855 99999999999999999999864211110
Q ss_pred HHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH------H-------------HHHHHHH-hh-cccCC
Q 013892 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE------V-------------REQIYKV-AS-VNLCS 386 (434)
Q Consensus 328 ~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~------~-------------~~~l~~~-~~-~~~~~ 386 (434)
..++ .-|+++|+||.|+ .+|.++|++++.+...+ + +..+.+. .. ...+.
T Consensus 179 ---~~~g------aDivv~S~sK~~~-g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 248 (397)
T PRK05939 179 ---KDVG------ASLVINSLSKYIA-GHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATL 248 (397)
T ss_pred ---cccC------CEEEEecCeeccc-CCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCC
Confidence 0111 2389999999995 58999999876211100 1 1122211 11 33344
Q ss_pred chHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 387 NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 387 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++... ..+++.-+.+....++..++...+.+.|+.+.
T Consensus 249 ~p~~a---~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p 285 (397)
T PRK05939 249 SSEAA---HRIAIGAETLALRVDRSCSNALALAQFLEAHP 285 (397)
T ss_pred CHHHH---HHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 44433 44555556677788888889999999998765
No 207
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.79 E-value=1.3e-17 Score=168.53 Aligned_cols=263 Identities=14% Similarity=0.130 Sum_probs=174.8
Q ss_pred Cccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
.+||+..+ -..-+|++++++.+++..... ....|.. ....++.+.++++ .+ .+.+++++++++|+
T Consensus 40 ~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~-~~~~~~~-~~~~~la~~l~~~----~~----~~~v~~~~sGseA~ 109 (406)
T PRK12381 40 EYIDFAGGIAVNALGHAHPALREALNEQASKFWH-TGNGYTN-EPVLRLAKKLIDA----TF----ADRVFFCNSGAEAN 109 (406)
T ss_pred EEEEcCcCHhhccCCCCCHHHHHHHHHHHhhccc-ccCccCC-HHHHHHHHHHHhh----CC----CCeEEEcCCcHHHH
Confidence 35665442 122378899999998875321 1112221 1133444444443 22 46899999999999
Q ss_pred HHHHHHHhc-------CCCCEEEEcCCCChhHHHHHHHcCCeEEEE----ecCCC--CCCCCCHHHHHHHHHHHHhcCCC
Q 013892 204 HMMMQLLIR-------SENDGILCPIPQYPLYSASIALHGGTLVPY----YLDEA--TGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 204 ~~~l~~l~~-------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~----~~~~~--~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++.... .++.+|+..+.+|.+........+...... ++.+. .-...|++.+++.+++ +
T Consensus 110 e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~ 183 (406)
T PRK12381 110 EAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD------Q 183 (406)
T ss_pred HHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC------C
Confidence 999988531 135789999999988765444333221100 00000 0012478899988864 6
Q ss_pred eeEEEEecCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecC
Q 013892 271 VRALVVINPGNPTGQVL--AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV 348 (434)
Q Consensus 271 ~~~i~l~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~ 348 (434)
+++|++ +|.|++|.++ +.+.+++|.++|++||+++|+||+|.++.+.+. +.... ... ..+| +.||
T Consensus 184 ~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~--~~~~~--~~~---v~pD-----i~t~ 250 (406)
T PRK12381 184 TCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE--LYAYM--HYG---VTPD-----VLTT 250 (406)
T ss_pred eeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcc--hhhhH--hhC---CCCC-----EEEe
Confidence 766666 7999998765 689999999999999999999999988655543 22111 111 2255 2499
Q ss_pred CCCCCCCCCceeEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 349 SKGYYGECGKRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 349 SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
||++ | .|+|+||+++ ++++++.+.... ..+.+.+++.+.++...++-.+ -.+.+++++++.+.+.+.|++..
T Consensus 251 sK~l-~-gG~~ig~~~~---~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~L~~l~ 323 (406)
T PRK12381 251 AKAL-G-GGFPIGAMLT---TEKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN-TPEMLNGVKQRHDWFVERLNTIN 323 (406)
T ss_pred hhhh-h-CCCceEEEEE---cHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHH
Confidence 9999 5 7999999987 889988886533 3455778888888877554321 13578889999999999998875
No 208
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.79 E-value=2.4e-17 Score=164.58 Aligned_cols=218 Identities=16% Similarity=0.162 Sum_probs=150.8
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHcC
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALHG 236 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~----~~~~~~g 236 (434)
..|+.+. ...|++.++++. | .+..+++++| +.++..++. ++ ++||+|++++|.|+... ..+...|
T Consensus 45 ~r~~~p~-~~~Le~~la~l~----g---~~~al~~~SG-~~Al~~~l~-~l-~pGd~Vi~~~~~y~~t~~~~~~~~~~~g 113 (380)
T PRK06176 45 SRSGNPT-RFALEELIADLE----G---GVKGFAFASG-LAGIHAVFS-LF-QSGDHVLLGDDVYGGTFRLFDKVLVKNG 113 (380)
T ss_pred cCCCChh-HHHHHHHHHHHh----C---CCCEEEECCH-HHHHHHHHH-Hc-CCCCEEEEcCCChhHHHHHHHHHHHhcC
Confidence 3344433 677888888875 3 2234555555 568887765 55 79999999999998653 3455678
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
++++.++. .|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....
T Consensus 114 i~v~~vd~-------~d~e~l~~ai~~------~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~ 177 (380)
T PRK06176 114 LSCTIIDT-------SDLSQIKKAIKP------NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPY 177 (380)
T ss_pred eEEEEcCC-------CCHHHHHHhcCc------CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccc
Confidence 88887753 378999988876 7999999999999999998 8899999999999999999998754
Q ss_pred cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhc-ccCCchHHHHHHH
Q 013892 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASV-NLCSNISGQILAS 395 (434)
Q Consensus 317 ~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~ 395 (434)
+... . .++ .| ++++|++|.+.|..+.-+|+++. .++++.+++...+.. ..+.++...+.+.
T Consensus 178 ~~~p--~--------~~g---aD---ivv~S~tK~l~g~~d~~gG~vv~--~~~~~~~~~~~~~~~~G~~~~~~~~~l~~ 239 (380)
T PRK06176 178 YQNP--L--------LLG---AD---IVVHSGTKYLGGHSDVVAGLVTT--NNEALAQEIAFFQNAIGGVLGPQDSWLLQ 239 (380)
T ss_pred cCCc--c--------ccC---CC---EEEecCceeccCCccceeeEEEe--cHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 3321 1 111 23 88999999995433356777754 356777777665542 3333444444333
Q ss_pred HHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 396 LVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 396 ~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
. .-+.+....++..++...+.+.|+++.
T Consensus 240 ~---gl~tl~~R~~~~~~~a~~la~~L~~~p 267 (380)
T PRK06176 240 R---GIKTLGLRMEAHQKNALCVAEFLEKHP 267 (380)
T ss_pred h---ccCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2 224455666777777777777777653
No 209
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.79 E-value=1.4e-17 Score=168.24 Aligned_cols=259 Identities=12% Similarity=0.063 Sum_probs=173.5
Q ss_pred CCccccccc--CCC---CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET--QGL---FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~--~~~---~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
...||+..+ ... -++.+.+++.+.++.... ...+....-..+|.+.++++. | .+.+++++++++|
T Consensus 41 ~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~A 110 (401)
T PRK00854 41 NRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTL--TSRAFRNDQLAPLYEELAALT----G----SHKVLPMNSGAEA 110 (401)
T ss_pred CEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccc--cccccCCHHHHHHHHHHHhhC----C----CCEEEEeCCcHHH
Confidence 345666554 122 278899999999887532 111222233455666666553 3 3589999999999
Q ss_pred HHHHHHHHhc--------CCC-CEEEEcCCCChhHHHHHHHcCCe-------------EEEEecCCCCCCCCCHHHHHHH
Q 013892 203 VHMMMQLLIR--------SEN-DGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGLETSEVKKQ 260 (434)
Q Consensus 203 l~~~l~~l~~--------~~g-d~Vlv~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~ 260 (434)
+..+++.+.. .+| ++|++..-+|......+...+.. +..++ ..|++.|++.
T Consensus 111 ~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~ 183 (401)
T PRK00854 111 VETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEAA 183 (401)
T ss_pred HHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHHH
Confidence 9999988841 123 68888887777654433332221 12221 1478999998
Q ss_pred HHHHHhcCCCeeEEEEecCCCCCccCCCH-HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCC
Q 013892 261 LEAAKAKGITVRALVVINPGNPTGQVLAE-ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKD 339 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~~p~NPtG~~~~~-~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~ 339 (434)
+.+ ++++|++++|+||+|.+++. +.+++|.++|++||+++|+||+|.++.+.+. ... . ......+|
T Consensus 184 i~~------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~--~~~--~---~~~g~~~D 250 (401)
T PRK00854 184 ITP------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK--LLA--E---EHEGIEAD 250 (401)
T ss_pred hCC------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCch--HhH--H---hhcCCCCC
Confidence 865 78999999999999999985 4699999999999999999999987544432 111 1 11111245
Q ss_pred ceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHH
Q 013892 340 ISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGI 418 (434)
Q Consensus 340 ~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l 418 (434)
+++ ++|.++| ..+|+||+++ ++++++.+..... ...+.+++.+.++...|+..+. ++..+.++++++.+
T Consensus 251 --~~~---~~K~l~g-g~~~ig~v~~---~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~-~~~~~~~~~~~~~l 320 (401)
T PRK00854 251 --VTL---IGKALSG-GFYPVSAVLS---NSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE-EGMIENAAEMGAYF 320 (401)
T ss_pred --EEE---ecccccC-CccCeEEEEE---cHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHH
Confidence 232 3799953 2379999987 8888887764333 4456788888888887754221 23678888888888
Q ss_pred HHHHHHHH
Q 013892 419 LSSLARRA 426 (434)
Q Consensus 419 ~~~L~~~~ 426 (434)
.+.|++..
T Consensus 321 ~~~L~~~~ 328 (401)
T PRK00854 321 LEGLRSIR 328 (401)
T ss_pred HHHHHhhc
Confidence 88888753
No 210
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.79 E-value=1.1e-17 Score=166.08 Aligned_cols=247 Identities=15% Similarity=0.169 Sum_probs=161.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcc------hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQG------IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G------~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~ 212 (434)
.+|+.+++++.+.+..... ....+....+ +.++|+.+++++ | +++++|++|+|+++++..++..+..
T Consensus 9 ~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~v~~~~g~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFG-NPSSRTHEFGHNAKKAVERARKQVAEAL----G--ADTEEVIFTSGATESNNLAILGLAR 81 (353)
T ss_pred CCCHHHHHHHHHHHHhcCC-CCCchhhHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 5788899999888754211 0111111111 456777777766 3 5678999999999999999888752
Q ss_pred ---CCC-CEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 213 ---SEN-DGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 213 ---~~g-d~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
.+| +.|++....|+.+.. .++..|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.
T Consensus 82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~ 153 (353)
T TIGR03235 82 AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRP------DTLLVSIMHVNNETGS 153 (353)
T ss_pred hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCC------CCEEEEEEcccCCcee
Confidence 245 789988877776544 3455799999998874 357899999998865 7899999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+++ +++|.++|+++|+++|+|+++......- . +.....| +++.|..|.+ |.+| +|++.+
T Consensus 154 ~~~---~~~I~~l~~~~~~~~ivD~a~~~g~~~~-----~-------~~~~~~D---~~~~s~~K~~-gp~g--~g~l~~ 212 (353)
T TIGR03235 154 IQP---IREIAEVLEAHEAFFHVDAAQVVGKITV-----D-------LSADRID---LISCSGHKIY-GPKG--IGALVI 212 (353)
T ss_pred ccC---HHHHHHHHHHcCCEEEEEchhhcCCccc-----c-------ccccCCC---EEEeehhhcC-CCCc--eEEEEE
Confidence 998 8999999999999999999977432211 1 1111123 5667889976 6556 788876
Q ss_pred ecCCHHHHHH--HHHH-------hh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQ--IYKV-------AS-VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 366 ~~~~~~~~~~--l~~~-------~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
+++.... +... .. ....++.....++...++.. +..++..+++++.++.+++.|++
T Consensus 213 ---~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 279 (353)
T TIGR03235 213 ---RKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT 279 (353)
T ss_pred ---ccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc
Confidence 4443221 1100 00 11223333333333333211 23456667777777777777755
No 211
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.79 E-value=5.6e-17 Score=154.73 Aligned_cols=245 Identities=18% Similarity=0.229 Sum_probs=159.7
Q ss_pred CCCC-CCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHH-H-HHHHHhc-----------CCCCEEEEcCCCC
Q 013892 160 TGAY-SHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVH-M-MMQLLIR-----------SENDGILCPIPQY 225 (434)
Q Consensus 160 ~~~Y-~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~-~-~l~~l~~-----------~~gd~Vlv~~p~y 225 (434)
...| +-..|++++|+-.|+.+ ++++++|++...++-.+. - +..+++. .+.-+.|+|.|+|
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGY 134 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGY 134 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--
T ss_pred ccCCCCccCChHHHHHHHHHHh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCc
Confidence 5679 88999999999999999 578999998877665442 2 2222210 1234689999999
Q ss_pred hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-cCCCCCccCCCHHHHHHHHHH-HHHcC
Q 013892 226 PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDF-CKKEG 303 (434)
Q Consensus 226 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~-~~~~~ 303 (434)
..+..+++.+|++.++||+.++ ++|+|.+++.+.+ .+.+|.|++. --+||||.++|.+..++++.+ ....+
T Consensus 135 DRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~----D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~D 207 (425)
T PF12897_consen 135 DRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAE----DPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPD 207 (425)
T ss_dssp HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHT----STTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT
T ss_pred hHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhc----CCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcC
Confidence 9999999999999999999988 9999999998853 2378999877 669999999999999999988 34579
Q ss_pred CEEEEccCCCCCccCCCCCc---cchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh
Q 013892 304 LVLLADEVYQENVYVPEKKF---HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (434)
Q Consensus 304 ~~li~Deay~~~~~~~~~~~---~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 380 (434)
..|+-|++|.-..+.++.+. ..+.......+ .+| +++.+.|.||.. .+|..++++.+ +++.++.+.+..
T Consensus 208 FRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AG--npd-rv~~F~STSKIT--f~GaGva~~aa---S~~Nl~~~~~~~ 279 (425)
T PF12897_consen 208 FRIFWDNAYAVHHLYDEEPRDALLNILDACAKAG--NPD-RVYVFASTSKIT--FPGAGVAFFAA---SEANLAWIKKHL 279 (425)
T ss_dssp -EEEEE-TTTT-BSSSSSS------HHHHHHHTT---TT-SEEEEEESTTTS---TTSS-EEEEE----HHHHHHHHHHH
T ss_pred eEEEeecCceEeeccccccchhhhHHHHHHHHcC--CCC-eEEEEecccccc--cCCcceeeeec---CHHHHHHHHHHh
Confidence 99999999998777332212 35666655544 467 899999999975 48999999987 888888888877
Q ss_pred h-cccCCchHHHHHHHHHcCCCC-----CChHHHHHHHHHHHHHHHHHHHH
Q 013892 381 S-VNLCSNISGQILASLVMSPPK-----VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 381 ~-~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+ .+.++.-+.|..-..++.+.+ +.++..+.++-+.+.+.+.|+++
T Consensus 280 ~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~ 330 (425)
T PF12897_consen 280 SVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEE 330 (425)
T ss_dssp HHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 6 667899999999888888743 12233333444444444444443
No 212
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.78 E-value=2.3e-17 Score=164.35 Aligned_cols=223 Identities=13% Similarity=0.060 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhH--HHHHHHcCCeEEEEecCCC
Q 013892 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY--SASIALHGGTLVPYYLDEA 247 (434)
Q Consensus 170 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~ 247 (434)
.++|+.+++++ |.+-+.++|++|+|+++++..++..+. .+||.|++..+.+.+. ...++..|++++.++.++
T Consensus 38 ~~~r~~la~l~----~~~~~~~~i~~t~~~t~al~~~~~~l~-~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~- 111 (363)
T TIGR02326 38 EQIRQQLLALA----TAEEGYTSVLLQGSGTFAVEAVIGSAV-PKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGE- 111 (363)
T ss_pred HHHHHHHHHHh----CCCCCceEEEEcCCCHHHHHHHHHhcC-CCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC-
Confidence 44556666655 432223479999999999999999988 6888877766655444 466788999999999864
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchH
Q 013892 248 TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (434)
Q Consensus 248 ~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~ 327 (434)
++.+|++.+++++++. .+++++.+++++||||..++ +++|.++|+++|+++|+|+++. ++.. ..++.
T Consensus 112 -~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~---~g~~--~~~~~ 178 (363)
T TIGR02326 112 -VEPPDVVEVEAILAAD----PAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSS---FGGI--PIDIA 178 (363)
T ss_pred -CCCCCHHHHHHHHhhC----CCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEcccc---ccCc--ccchh
Confidence 3478999999998752 14677888899999999999 8899999999999999998765 3332 11221
Q ss_pred HHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh------------------h-cccCCch
Q 013892 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA------------------S-VNLCSNI 388 (434)
Q Consensus 328 ~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~------------------~-~~~~~~~ 388 (434)
.++ .| +++.|++|.+.|.+| +||+++ +++.++.+.... . ....++.
T Consensus 179 ----~~~---~D---~~~~s~~K~l~~p~G--~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~ 243 (363)
T TIGR02326 179 ----ELH---ID---YLISSANKCIQGVPG--FGFVIA---RQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPT 243 (363)
T ss_pred ----hcC---cc---EEEecCccccccCCc--ceEEEE---CHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcH
Confidence 111 33 778899998866566 699987 777776643100 0 1124566
Q ss_pred HHHHHHHHHcCC---CCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 389 SGQILASLVMSP---PKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 389 ~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
..+.++..+++. ....++..+++.++++.+.+.|+++.
T Consensus 244 ~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g 284 (363)
T TIGR02326 244 HVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALG 284 (363)
T ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 666664444432 12245677889999999999988763
No 213
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.78 E-value=7.3e-18 Score=170.24 Aligned_cols=248 Identities=15% Similarity=0.152 Sum_probs=162.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCC-CCC----CCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh--
Q 013892 139 LFSADSIERAWQILDQIPGRAT-GAY----SHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-- 211 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~-~~Y----~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~-- 211 (434)
+.|+.+++++.+.+........ ..+ .....+.++|+.+++++ | +++++|++|+|+++++..++..+.
T Consensus 14 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~v~~~~g~t~a~~~~l~~l~~~ 87 (402)
T TIGR02006 14 PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI----G--ADSREIVFTSGATESNNLAIKGIAHF 87 (402)
T ss_pred CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 4688899998887754321001 011 11123556777777776 3 567899999999999999887653
Q ss_pred -cCCCCEEEEcCCCChhHHHHH---HHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCC
Q 013892 212 -RSENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (434)
Q Consensus 212 -~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~ 287 (434)
..+||+|+++.+.|+.+...+ +..|++++.+++++ ++.+|++.|++++++ +++++++++++||||.+.
T Consensus 88 ~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~v~~~~n~tG~~~ 159 (402)
T TIGR02006 88 YKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS--NGLIDLEELKAAIRD------DTILVSIMHVNNEIGVIQ 159 (402)
T ss_pred hcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECCCcCceecc
Confidence 158899999999999766543 45699999998874 357899999998876 789999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEec
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~ 367 (434)
+ +++|.++|+++|+++++|+++...... ..+ .. ...| +++.|..|.+ |.+| +|++.+
T Consensus 160 ~---~~~I~~l~~~~g~~livD~a~a~g~~~-----~~~----~~---~~~D---~~~~s~~K~~-gp~G--~G~l~~-- 216 (402)
T TIGR02006 160 D---IAAIGEICRERKVFFHVDAAQSVGKIP-----INV----NE---LKVD---LMSISGHKIY-GPKG--IGALYV-- 216 (402)
T ss_pred c---HHHHHHHHHHcCCEEEEEcchhcCCcc-----cCc----cc---cCCC---EEEEehhhhc-CCCc--eEEEEE--
Confidence 8 889999999999999999998742211 111 11 1134 6777888976 6456 777765
Q ss_pred CCHHHHHHHHHH-------hh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHH
Q 013892 368 FSAEVREQIYKV-------AS-VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 368 ~~~~~~~~l~~~-------~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
.++....+... .. ....++.....++...++.. +..+...+++++.++.+.+.|++
T Consensus 217 -~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 281 (402)
T TIGR02006 217 -RRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKS 281 (402)
T ss_pred -ccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 33222222111 01 11234444444444444321 12344455556666666665554
No 214
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.78 E-value=3.7e-17 Score=163.34 Aligned_cols=257 Identities=12% Similarity=0.088 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-----CCCCE
Q 013892 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----SENDG 217 (434)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-----~~gd~ 217 (434)
.+.+++...+..... ....|+ |..++.+.+.+.+.+..| ++++++++++|+++++..++.++.. .+||+
T Consensus 35 ~~~~a~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~la~~~g--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 108 (373)
T TIGR03812 35 IAVKAYDMFIETNLG-DPGLFP---GTKKIEEEVVGSLGNLLH--LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPN 108 (373)
T ss_pred HHHHHHHHHhhcCCC-CcccCc---cHHHHHHHHHHHHHHHhC--CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcE
Confidence 345665555544221 122242 334444455555554445 4567889999999998888766541 36789
Q ss_pred EEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
|++++++|..|...++..|++++.++.+. ++.+|+++|++++++ ++..++++.|+||||.+.+ +++|.+
T Consensus 109 vl~~~~~h~~~~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~l~~------~~~~vv~~~~~~~tG~~~~---~~~i~~ 177 (373)
T TIGR03812 109 IIVPESAHFSFEKAAEMLGLELRYAPLDE--DYTVDVKDVEDLIDD------NTIGIVGIAGTTELGQIDD---IEELSK 177 (373)
T ss_pred EEECCcchHHHHHHHHHcCCeEEEEeeCC--CCCcCHHHHHHHHhh------CcEEEEEECCCCCCCccCC---HHHHHH
Confidence 99999999999999999999999999864 468999999999976 5555666678999999988 889999
Q ss_pred HHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 298 ~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
+|+++|+++|+|++|..+...-....... ..++-....+. .+..|..| | ++++.++|++++ .++++++.+.
T Consensus 178 l~~~~~~~livD~a~~~~~~~~~~~~~~~----~~~d~~~~~~d-~~~~s~~K-~-~~~~~~~G~~~~--~~~~~~~~l~ 248 (373)
T TIGR03812 178 IALENGIYLHVDAAFGGFVIPFLKKGYNP----PPFDFSLPGVQ-SITIDPHK-M-GLSPIPAGGILF--RSKSYLKYLS 248 (373)
T ss_pred HHHHcCCeEEEEcCchhHHHHHHhcCCCC----CCccccCCCCC-EEEECccc-c-CCCcCCceEEEE--eCHHHHhhhc
Confidence 99999999999999986432100000000 00000001112 23456779 5 567889987764 2677777664
Q ss_pred HHhh-cc--------cCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 378 KVAS-VN--------LCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 378 ~~~~-~~--------~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.... .. ...+.....++...++. .+..++..++..+.++.+.+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~ 307 (373)
T TIGR03812 249 VDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI 307 (373)
T ss_pred ccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2111 11 12233444444455543 2223456778888888888888765
No 215
>PRK14012 cysteine desulfurase; Provisional
Probab=99.78 E-value=6.4e-18 Score=170.76 Aligned_cols=191 Identities=16% Similarity=0.200 Sum_probs=140.0
Q ss_pred CCCHHHHHHHHHHHH--cCCCCCCCC------CCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH
Q 013892 139 LFSADSIERAWQILD--QIPGRATGA------YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL 210 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~--~~~~~~~~~------Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 210 (434)
++|+.+++++.+.+. .... .... +.......++|+.+++++ | .++++|++++|+++++.+++.++
T Consensus 14 ~~~~~v~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~ia~~~----g--~~~~~v~~~~g~t~al~~~l~~l 86 (404)
T PRK14012 14 PVDPRVAEKMMPYLTMDGTFG-NPASRSHRFGWQAEEAVDIARNQIADLI----G--ADPREIVFTSGATESDNLAIKGA 86 (404)
T ss_pred CCCHHHHHHHHHHHHhcccCc-CCCchhhHHHHHHHHHHHHHHHHHHHHc----C--cCcCeEEEeCCHHHHHHHHHHHH
Confidence 568889998888775 2111 0111 111123556777777776 3 56788999999999999988776
Q ss_pred h---cCCCCEEEEcCCCChhHHHHHH---HcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 211 I---RSENDGILCPIPQYPLYSASIA---LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 211 ~---~~~gd~Vlv~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
. ..+||+|+++.++|+.+...+. ..|++++.++.++ ++.+|++.|++++++ ++++|++++++||||
T Consensus 87 ~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG 158 (404)
T PRK14012 87 AHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRD------DTILVSIMHVNNEIG 158 (404)
T ss_pred HHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECcCCCcc
Confidence 3 2589999999999987755443 4599999998874 457899999999976 789999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEE
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~ 364 (434)
.+.+ +++|.++|+++|+++|+|+++...... ... .. ...| +++.|++|.+ | |+ ++|+++
T Consensus 159 ~~~~---~~~I~~la~~~g~~vivD~a~~~g~~~-----~~~----~~---~~~D---~~~~s~~K~~-g-p~-g~G~l~ 217 (404)
T PRK14012 159 VIQD---IAAIGEICRERGIIFHVDAAQSVGKVP-----IDL----SK---LKVD---LMSFSAHKIY-G-PK-GIGALY 217 (404)
T ss_pred chhh---HHHHHHHHHHcCCEEEEEcchhcCCcc-----cCc----cc---CCCC---EEEEehhhcc-C-CC-ceEEEE
Confidence 9998 889999999999999999998742111 111 11 1134 5666999976 5 44 688887
Q ss_pred E
Q 013892 365 V 365 (434)
Q Consensus 365 ~ 365 (434)
+
T Consensus 218 ~ 218 (404)
T PRK14012 218 V 218 (404)
T ss_pred E
Confidence 6
No 216
>PRK07505 hypothetical protein; Provisional
Probab=99.77 E-value=3e-16 Score=158.51 Aligned_cols=254 Identities=15% Similarity=0.090 Sum_probs=153.3
Q ss_pred CCCccccccc---CCCCCHHHHHHHHHHHHcCC-CCCCCCC--CCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 127 HPSILDRSET---QGLFSADSIERAWQILDQIP-GRATGAY--SHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 127 ~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~-~~~~~~Y--~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
....+||..+ +..-++++++++.+.++..+ ....... .......++++.+++++ | . +.+++++| +
T Consensus 45 g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~~~~sG-~ 115 (402)
T PRK07505 45 GHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF----G--A--SVLTFTSC-S 115 (402)
T ss_pred CceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh----C--C--CEEEECCh-H
Confidence 3446777655 22568999999999887642 1001100 11222445555555554 4 2 45556655 5
Q ss_pred HHHHHHHHHHhc---CCC-CEEEEcCCCChh-HH--HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeE
Q 013892 201 PAVHMMMQLLIR---SEN-DGILCPIPQYPL-YS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRA 273 (434)
Q Consensus 201 ~al~~~l~~l~~---~~g-d~Vlv~~p~y~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~ 273 (434)
++...++..+.. .+| ..|++.+..|.+ +. ......+..++.++. .|++.|++++++ ++++
T Consensus 116 ~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~------~~~~ 182 (402)
T PRK07505 116 AAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKT------NKTV 182 (402)
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhc------CCCE
Confidence 677666654321 123 236666655543 21 112223566777664 378999988865 5789
Q ss_pred EEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCC
Q 013892 274 LVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY 353 (434)
Q Consensus 274 i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~ 353 (434)
+++++|+||||.+.+ +++|.++|+++|+++|+||+|....|++...... ...++...++ .+|+++||||.|
T Consensus 183 ~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~----~~~~~~~~~d-~~i~~~s~sK~~- 253 (402)
T PRK07505 183 AYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYV----RSELDYRLNE-RTIIAASLGKAF- 253 (402)
T ss_pred EEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchH----HHHcCCCCCC-CeEEEEechhhh-
Confidence 999999999999999 7888899999999999999996555554321111 1122210234 478999999999
Q ss_pred CCCCceeEEEEEecCCHHHHHHHHHHhhc--c-cCCchHHHHHHHHHcC--CCCCChHHHHHHHHHHH
Q 013892 354 GECGKRGGYMEVTGFSAEVREQIYKVASV--N-LCSNISGQILASLVMS--PPKVGDESYESYCAERD 416 (434)
Q Consensus 354 g~~G~R~G~~~~~~~~~~~~~~l~~~~~~--~-~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~r~ 416 (434)
|.+| ||+++ .++++++.+.+.... + .++++++..++...++ ..+++.+..+.++++.+
T Consensus 254 ~~~G---g~~~~--~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~ 316 (402)
T PRK07505 254 GASG---GVIML--GDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIA 316 (402)
T ss_pred hccC---eEEEe--CCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHH
Confidence 5554 88753 377888888775542 2 2345566666666554 33444444444444443
No 217
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.77 E-value=6.2e-17 Score=162.15 Aligned_cols=248 Identities=17% Similarity=0.193 Sum_probs=157.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCC----CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc--
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSH----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-- 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-- 212 (434)
.+|+.+++++.+.+.+........+.. ..-+.++|+.+++++ | +++++|++|+|+++++..++..+..
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~i~~t~~~t~a~~~al~~~~~~~ 83 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLL----G--AEPDEIIFTSGGTESDNTAIKSALAAQ 83 (379)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCcHHHHHHHHHHHHHHhc
Confidence 567889999888876432100101110 112345556666665 4 4678999999999999998887641
Q ss_pred CCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH
Q 013892 213 SENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (434)
Q Consensus 213 ~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~ 289 (434)
.+++.|++...+|+.+... ++..|++++.++++.+ +.+|++.+++.+++ +++++++++++||||.+++
T Consensus 84 ~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~--g~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~- 154 (379)
T TIGR03402 84 PEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEE--GRLDLEELRAAITD------DTALVSVMWANNETGTIFP- 154 (379)
T ss_pred CCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCC--CcCCHHHHHHhcCC------CcEEEEEEcccCCeeeccc-
Confidence 3568999999898876543 4446999999988643 46899999999976 7899999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC
Q 013892 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (434)
Q Consensus 290 ~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~ 369 (434)
+++|.++|+++|+++++|+++... .. ...+ .....| +++.|..|.+ |.+| +|++.+ .
T Consensus 155 --~~~I~~l~~~~g~~vivD~~~~~g---~~--~~~~-------~~~~~D---~~~~s~~K~~-gp~G--~g~l~v---~ 211 (379)
T TIGR03402 155 --IEEIGEIAKERGALFHTDAVQAVG---KI--PIDL-------KEMNID---MLSLSGHKLH-GPKG--VGALYI---R 211 (379)
T ss_pred --HHHHHHHHHHcCCEEEEECccccc---cc--ccCc-------ccCCCC---EEEEcHHHcC-CCCc--eEEEEE---C
Confidence 678999999999999999998742 11 1111 111123 5666888954 7666 666654 2
Q ss_pred HHHH--HHHH----HHhhcccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHH
Q 013892 370 AEVR--EQIY----KVASVNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 370 ~~~~--~~l~----~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
++.. ..+. ........++..+..++...++-. +++++..+++++.++.+.+.|++
T Consensus 212 ~~~~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 273 (379)
T TIGR03402 212 KGTRFRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA 273 (379)
T ss_pred CCCCCCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 2211 0010 000112244444444444433221 23344455666666666666653
No 218
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.76 E-value=3.3e-16 Score=157.70 Aligned_cols=218 Identities=15% Similarity=0.105 Sum_probs=152.1
Q ss_pred CCccccccc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcch----HHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 128 PSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGI----KGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 128 p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~----~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
..+++|++| +....+++++++.+.+++.+. +..+-.-..|. .+|.+.+|+|+ | .++.+++++|-
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~-g~~gSrl~~G~~~~h~~LE~~LA~f~----g---~e~all~sSGy- 172 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAAKEYGM-GPKGSALICGYTTYHRLLESSLADLK----K---KEDCLVCPTGF- 172 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHcCC-CCCCcCccccChHHHHHHHHHHHHHH----C---CCcEEEECChH-
Confidence 347788888 567788999999999988654 22222233444 56667777776 3 23345555555
Q ss_pred HHHHHHHHHHh-------------cCCCCEEEEcCCCChhHHHHHHHc----CCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 201 PAVHMMMQLLI-------------RSENDGILCPIPQYPLYSASIALH----GGTLVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 201 ~al~~~l~~l~-------------~~~gd~Vlv~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
.+...++.+|. .+.+|.|+...-.|......++.. +++++.|+. .|++.|++.++.
T Consensus 173 ~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~L~~ 245 (476)
T PLN02955 173 AANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSLLSS 245 (476)
T ss_pred HHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHHHHh
Confidence 44444555541 135678888888999999998877 577777763 389999999976
Q ss_pred HHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEE
Q 013892 264 AKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLV 343 (434)
Q Consensus 264 ~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i 343 (434)
... +.++|++.-..++.|.+.+ +++|.++|++||+++|+||+|..++++..+. .....++ ..++ ..|
T Consensus 246 ~~~---~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~-----G~~e~~g-~~~d-i~i 312 (476)
T PLN02955 246 CKM---KRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGG-----GVAEEFN-CEAD-VDL 312 (476)
T ss_pred CCC---CceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCC-----cHHHHhC-CCCC-CcE
Confidence 421 2344444455899999999 8899999999999999999999988876421 2222222 1133 358
Q ss_pred EEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh
Q 013892 344 SFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (434)
Q Consensus 344 ~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 381 (434)
+++||||.| |.++||+++ ++++++.+.....
T Consensus 313 i~~TLsKA~----G~~GGfi~g---s~~~~~~l~~~~~ 343 (476)
T PLN02955 313 CVGTLSKAA----GCHGGFIAC---SKKWKQLIQSRGR 343 (476)
T ss_pred EEEeCccch----hccCceeec---HHHHHHHHHHhCC
Confidence 999999987 677899876 8889998887654
No 219
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.75 E-value=4.1e-17 Score=143.58 Aligned_cols=167 Identities=19% Similarity=0.253 Sum_probs=129.0
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHH-HHHHHcCCeEEEEecCCC
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS-ASIALHGGTLVPYYLDEA 247 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~-~~~~~~g~~~~~~~~~~~ 247 (434)
+.++++.+++++. .+.+++++++|+++++..++..+. .++++|+++.++|+++. ..+...|++++.++.+..
T Consensus 2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 74 (170)
T cd01494 2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALL-GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDA 74 (170)
T ss_pred HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhC-CCCCEEEEeecccceehhhHHHhcCCEEEEeccCCC
Confidence 4578888888872 467789999999999999999997 68999999999999888 888889999999998765
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchH
Q 013892 248 TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (434)
Q Consensus 248 ~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~ 327 (434)
..+..+++.+++... +.+++++++++++||+|...+ .++|.++|+++|+++|+|++|..+...... .
T Consensus 75 ~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~--~--- 141 (170)
T cd01494 75 GYGGLDVAILEELKA-----KPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG--V--- 141 (170)
T ss_pred Cccchhhhhhhhccc-----cCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc--c---
Confidence 433333334443322 237899999999999999998 588889999999999999999986665321 0
Q ss_pred HHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 328 ~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
.. .....+ +++.|++|.| | |.++|++++
T Consensus 142 ~~----~~~~~d---~~~~s~~K~~-~--~~~~G~l~~ 169 (170)
T cd01494 142 LI----PEGGAD---VVTFSLHKNL-G--GEGGGVVIV 169 (170)
T ss_pred cc----ccccCC---EEEEEccccc-C--CCceEEEEe
Confidence 00 001123 7788999998 4 488999874
No 220
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.75 E-value=3.3e-16 Score=155.13 Aligned_cols=175 Identities=17% Similarity=0.247 Sum_probs=134.7
Q ss_pred CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecC
Q 013892 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD 245 (434)
Q Consensus 166 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~ 245 (434)
.....++++.+++++ | .+++++++|+++++..++..+...+||+|+++.++|..+...+...|++++.++++
T Consensus 17 ~~~~~~~~~~la~~~----~----~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (352)
T cd00616 17 GPKVREFEKAFAEYL----G----VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDID 88 (352)
T ss_pred CHHHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecC
Confidence 345789999999997 2 34688888999999999998832699999999999999999999999999999986
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccc
Q 013892 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHS 325 (434)
Q Consensus 246 ~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s 325 (434)
+ ++|.+|++.+++++++ ++++|+++| ++|...+ +++|.++|+++|+++|+|++|.........
T Consensus 89 ~-~~~~~d~~~l~~~i~~------~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~~~---- 151 (352)
T cd00616 89 P-DTYNIDPELIEAAITP------RTKAIIPVH---LYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYKGR---- 151 (352)
T ss_pred C-CcCCcCHHHHHHhcCc------CCeEEEEEC---CCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeECCE----
Confidence 5 3678999999998865 788998875 6898877 888889999999999999999753222110
Q ss_pred hHHHHhhhCCCCCCceEEEEecCC--CCCCCCCCceeEEEEEecCCHHHHHHHHHHh
Q 013892 326 FKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (434)
Q Consensus 326 ~~~~~~~l~~~~~~~~~i~i~S~S--K~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 380 (434)
.++ ...+ +.+.||+ |.+ ++-++|+++. .++++.+.+..+.
T Consensus 152 ------~~~-~~~d---~~~~S~~~~K~~---~~~~gg~~~~--~~~~~~~~~~~~~ 193 (352)
T cd00616 152 ------KVG-TFGD---AGAFSFHPTKNL---TTGEGGAVVT--NDEELAERARLLR 193 (352)
T ss_pred ------Ecc-cCcc---eeEEcCCCCCCC---cccCceEEEE--CCHHHHHHHHHHH
Confidence 001 0112 5566766 877 3456888865 3578888776543
No 221
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.74 E-value=1.9e-15 Score=151.52 Aligned_cols=199 Identities=18% Similarity=0.243 Sum_probs=146.4
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcCCCCEE
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGI 218 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~V 218 (434)
++.+.++++.+.+... . |....+..+|++++++++.. ++.++++|+++|+..++.++ + ++||+|
T Consensus 8 ~~~~~~~~v~~~~~~~----~--~~~g~~~~~le~~la~~~g~--------~~~v~~~sgt~al~~~l~al~~-~~Gd~V 72 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSD----F--LTQGPTVPAFEEALAEYVGA--------KYAVAFNSATSALHIACLALGV-GPGDRV 72 (380)
T ss_pred CCHHHHHHHHHHHhcC----C--ccCChhHHHHHHHHHHHHCC--------CeEEEEcCHHHHHHHHHHHcCC-CCCCEE
Confidence 3556677777777642 2 33344578999999999832 34566778899999999988 5 699999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|..+...+...|++++.++++++ +|.+|++++++++++.. ..++++|+++| ++|...+ +++|.++
T Consensus 73 iv~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~--~~~t~~v~~~~---~~G~~~~---~~~i~~l 143 (380)
T TIGR03588 73 WTTPITFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAK--GKLPKAIVPVD---FAGKSVD---MQAIAAL 143 (380)
T ss_pred EeCCcchHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhccc--CCCceEEEEeC---CCCccCC---HHHHHHH
Confidence 99999999999999999999999998754 57899999999997310 01688888654 5898876 8999999
Q ss_pred HHHcCCEEEEccCCCCCc-cCCCCCccchHHHHhhhCCCCCCceEEEEecCC--CCCCCCCCceeEEEEEecCCHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQ 375 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~-~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~S--K~~~g~~G~R~G~~~~~~~~~~~~~~ 375 (434)
|+++|++||+|+++.... +++. +... . .+.| +.+.||+ |.+ + .| .+|+++. .++++.++
T Consensus 144 ~~~~~~~lI~D~a~a~g~~~~~~-~~g~----~-----~~~d---~~~~S~~~~K~~-~-~~-~GG~v~~--~~~~~~~~ 205 (380)
T TIGR03588 144 AKKHGLKIIEDASHALGAEYGGK-PVGN----C-----RYAD---ATVFSFHPVKII-T-TA-EGGAVTT--NDEELAER 205 (380)
T ss_pred HHHcCCEEEEECCCcccCccCCE-eCCC----c-----cccc---eEEEecCCCCcc-c-cc-CceEEEE--CCHHHHHH
Confidence 999999999999998642 3321 1111 0 0123 6666765 877 3 34 6887764 37888888
Q ss_pred HHHHh
Q 013892 376 IYKVA 380 (434)
Q Consensus 376 l~~~~ 380 (434)
+...+
T Consensus 206 ~~~~~ 210 (380)
T TIGR03588 206 MRLLR 210 (380)
T ss_pred HHHHH
Confidence 76553
No 222
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.74 E-value=1.2e-15 Score=153.54 Aligned_cols=240 Identities=11% Similarity=0.070 Sum_probs=168.2
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH-HHHHHHHHHHhc-C-CCCEEEEcCCCChhHHHHHHHcCCeEEEEec-
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGAS-PAVHMMMQLLIR-S-ENDGILCPIPQYPLYSASIALHGGTLVPYYL- 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~-~al~~~l~~l~~-~-~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~- 244 (434)
...+...+.+.+.+..|.+ +.+..++++|+| .++.+++.++.. . +||.|+++.-+|......+...|++++.++.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~ 181 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETV 181 (444)
T ss_pred HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeee
Confidence 5566666666666666743 124588888888 577777776631 1 5899999999999999999999999999996
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
.++++|.+|+++|+++|++. +.+..++++.+|+ ||.....+++++|.++|++||+++|+|++|+... .
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~---~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~-------~ 249 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEI---GPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQS-------N 249 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhc---cCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcC-------h
Confidence 34557999999999999852 1134566666665 5555566789999999999999999999998521 1
Q ss_pred chHHHH-hhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCC-C
Q 013892 325 SFKKVS-RSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPP-K 402 (434)
Q Consensus 325 s~~~~~-~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~-~ 402 (434)
.+.... ..+.. ..+ .+++.|++|.+ .++|+ |+++++ .++++++.+.+.... ...+...|.+...++... +
T Consensus 250 ~~~~~~~~g~~~--Gra-d~vv~s~hK~l-~~pg~--Gg~I~~-~d~el~~~i~~~y~g-~~~~s~~~~~~~~ll~~G~~ 321 (444)
T TIGR03531 250 KYMELINKAIKV--GRV-DAVVSSTDKNF-MVPVG--GAIIYS-FDENFIQEISKSYPG-RASASPSLDVLITLLSLGSK 321 (444)
T ss_pred hhhhhhhccccc--cCC-CeEEEeCccCC-CCCCC--EEEEEE-CCHHHHHHHHHhccC-CCCChHHHHHHHHHHHhCHH
Confidence 111111 11110 011 25677999999 67787 665543 488888888765432 234456676666666543 4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARRAKAN 429 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~~~~~ 429 (434)
..+++.+++.++++.+.+.|++...+.
T Consensus 322 g~~~li~~~~~~a~~l~~~L~~l~~~~ 348 (444)
T TIGR03531 322 GYLELLKERKEMYKYLKELLQKLAERH 348 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 467788888888888888888877543
No 223
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.74 E-value=5.7e-16 Score=159.43 Aligned_cols=204 Identities=18% Similarity=0.196 Sum_probs=147.1
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCC---CCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH--HHHHhcC
Q 013892 139 LFSADSIERAWQILDQIPGRATGAY---SHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM--MQLLIRS 213 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y---~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~--l~~l~~~ 213 (434)
.+|+.+.+.+.+.... . ..+.| ...+|..+++.++++++.+.+|.+ ...+..++|+.+.+..+ ++.+..+
T Consensus 81 ~~~p~i~~~~~~~~~~-~--~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l~~~r~~~~~ 155 (481)
T PRK04366 81 KYNPKINEKVARLPGF-A--ELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGLLMIRAYHEA 155 (481)
T ss_pred CCCHHHHHHHHhCcch-h--cCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHHHHHHHHhhc
Confidence 4677777776653211 1 36678 467899999999999999998854 34555566766665533 3322225
Q ss_pred CCC----EEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH
Q 013892 214 END----GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (434)
Q Consensus 214 ~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~ 289 (434)
+|| +|+++.|.|+.|...++..|++++.++++. +|.+|+++|++++++ ++++|++++|+ |||.+ .
T Consensus 156 ~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~--~~~~D~e~L~~~i~~------~t~~V~v~~Pn-~tG~~--~ 224 (481)
T PRK04366 156 RGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNE--DGLVDLEALKAAVGE------DTAALMLTNPN-TLGLF--E 224 (481)
T ss_pred cCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCC--CCCcCHHHHHhhccc------CCeEEEEeCCC-Ccccc--c
Confidence 666 999999999999999999999999999853 468999999999976 78999999998 99964 3
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCC----CceeEEEEE
Q 013892 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC----GKRGGYMEV 365 (434)
Q Consensus 290 ~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~----G~R~G~~~~ 365 (434)
+++++|+++|+++|.++++|+++.....+.. +. ..++ -| +++.|..|.| |.| |--+|++.+
T Consensus 225 ~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~----~~----~~~G---aD---~~~~~~hK~l-~~P~g~Ggp~~G~l~~ 289 (481)
T PRK04366 225 RNILEIAEIVHEAGGLLYYDGANLNAILGKA----RP----GDMG---FD---VVHLNLHKTF-STPHGGGGPGSGPVGV 289 (481)
T ss_pred hHHHHHHHHHHHcCCEEEEEecChhhhcccC----Cc----cccC---CC---EEEEechhhc-CCCCCCCCCCeeeeee
Confidence 5799999999999999999999853212111 00 1111 24 7788989987 433 345777765
Q ss_pred ecCCHHHHHHH
Q 013892 366 TGFSAEVREQI 376 (434)
Q Consensus 366 ~~~~~~~~~~l 376 (434)
.+++.+.+
T Consensus 290 ---~~~~~~~l 297 (481)
T PRK04366 290 ---KEELAPFL 297 (481)
T ss_pred ---hhhhHhhC
Confidence 55555544
No 224
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=7.5e-16 Score=156.14 Aligned_cols=214 Identities=16% Similarity=0.196 Sum_probs=150.0
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~ 244 (434)
...|.+.+|++. | .+..++++++++|+..++.+++ .+||+|+++.+.|.... ..+...|++++.++.
T Consensus 65 ~~~le~~lA~l~----g----~~~al~~~SG~~Ai~~al~all-~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 65 NAVLEERVAALE----G----GTAALAVASGHAAQFLVFHTLL-QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred HHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHh-CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 466777888775 3 2357788888999999999888 79999999999998543 346678999988864
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
. |++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|.......
T Consensus 136 ~-------d~~~l~~ai~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~----- 194 (427)
T PRK05994 136 D-------DPASFERAITP------RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYLIR----- 194 (427)
T ss_pred C-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccccCC-----
Confidence 2 78899998876 7999999999999999998 8899999999999999999997532211
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC----------------HH-----HHHH--------
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS----------------AE-----VREQ-------- 375 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~----------------~~-----~~~~-------- 375 (434)
++ .++ .| ++++|++|.++| +|-.+|.+++.... +. +.+.
T Consensus 195 pl-----~~g---aD---ivv~S~tK~lgg-~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (427)
T PRK05994 195 PI-----EHG---AD---IVVHSLTKFLGG-HGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAI 262 (427)
T ss_pred cc-----ccC---Cc---EEEEcCccccCC-CCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHH
Confidence 11 111 34 889999999854 55445554432111 01 1111
Q ss_pred ---HHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 376 ---IYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 376 ---l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
....+....+.+++.. ..++..-+.++...++..++...+.+.|+.+..
T Consensus 263 ~~~~~~~~~~G~~~~~~~A---~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~ 314 (427)
T PRK05994 263 AARVLGLRDLGPAISPFNA---FLILTGIETLPLRMQRHSDNALAVAEWLKGHPK 314 (427)
T ss_pred HHHHHHHHhcCCCCCHHHH---HHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1111223334444443 344444456677888888888888888887653
No 225
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.74 E-value=4.9e-16 Score=156.54 Aligned_cols=258 Identities=14% Similarity=0.148 Sum_probs=168.8
Q ss_pred CCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
..+||+..+ -..-+|++++++.+.++.... ....|. .+....+++.+.+..+ .+.+++++++++|
T Consensus 35 ~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~-~~~~~~-----~~~~~~la~~L~~~~~----~~~~~f~~SGseA 104 (397)
T TIGR03246 35 KEYIDFAGGIAVNALGHAHPELVKALIEQADKLWH-IGNGYT-----NEPVLRLAKKLVDATF----ADKVFFCNSGAEA 104 (397)
T ss_pred CEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccc-ccCccC-----CHHHHHHHHHHHhhCC----CCEEEEeCCcHHH
Confidence 345666553 223488899999998876321 011222 2233444444443322 3689999999999
Q ss_pred HHHHHHHHhc-------CCCCEEEEcCCCChhHHH-HHHHcCCe------------EEEEecCCCCCCCCCHHHHHHHHH
Q 013892 203 VHMMMQLLIR-------SENDGILCPIPQYPLYSA-SIALHGGT------------LVPYYLDEATGWGLETSEVKKQLE 262 (434)
Q Consensus 203 l~~~l~~l~~-------~~gd~Vlv~~p~y~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~ 262 (434)
+..+++.... ...++|+..+-+|.+... .+...+.. +..++ ..|++.+++.++
T Consensus 105 ~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~ 177 (397)
T TIGR03246 105 NEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP-------YNDLAAAKALIS 177 (397)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC-------CCCHHHHHHHhc
Confidence 9999987621 023578887777776543 33333321 11121 137899998886
Q ss_pred HHHhcCCCeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCce
Q 013892 263 AAKAKGITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 341 (434)
+ ++++|+++.++++.|... +.+.+++|.++|++||+++|+||+|.++...+. +.... ..+ ..+|
T Consensus 178 ~------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~--~~a~~----~~g-v~pD-- 242 (397)
T TIGR03246 178 D------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE--LYAYM----HYG-VTPD-- 242 (397)
T ss_pred c------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcccc--chhhh----hcC-CCCC--
Confidence 4 677777775455556543 789999999999999999999999988644432 22111 111 2255
Q ss_pred EEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHH
Q 013892 342 LVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILS 420 (434)
Q Consensus 342 ~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 420 (434)
+ -+|||.+ | .|+|+||+++ ++++++.+.... ..+.+.+++++.++...++..+. ++.+++++++.+.+.+
T Consensus 243 -i--~t~~K~l-g-gG~pigav~~---~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~~~~l~~ 313 (397)
T TIGR03246 243 -I--LTSAKAL-G-GGFPIGAMLT---TTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNT-PELLAGVKQRHDLFVD 313 (397)
T ss_pred -E--EEeehhh-h-CCcceeEEEE---cHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHH
Confidence 2 2789999 5 6999999987 888888875432 24456778888887777753221 3578889999999999
Q ss_pred HHHHHH
Q 013892 421 SLARRA 426 (434)
Q Consensus 421 ~L~~~~ 426 (434)
.|++..
T Consensus 314 ~L~~l~ 319 (397)
T TIGR03246 314 GLEKIN 319 (397)
T ss_pred HHHHHH
Confidence 998765
No 226
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.73 E-value=4.7e-16 Score=158.05 Aligned_cols=271 Identities=13% Similarity=0.114 Sum_probs=167.5
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+||+..+ ...-++++.+++.+++.+.. +.+.+..+.+ ...++|+++....+.+.. +.+++++++++
T Consensus 40 G~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~----~~~~~~~~~~-~~~~la~~l~~~~~~~~~-~~~~f~~sGse 113 (425)
T PRK08088 40 GREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS----HTCFQVLAYE-PYLELCEKMNQKVPGDFA-KKTLLVTTGSE 113 (425)
T ss_pred CCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCC----CccccccCCH-HHHHHHHHHHHhCCCCCC-CEEEEeCCcHH
Confidence 3446676554 22348889999998887642 1222222233 334677777665443322 36666666667
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCeEEE----------------EecCCCCCCCCC----HHHHHHH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVP----------------YYLDEATGWGLE----TSEVKKQ 260 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----------------~~~~~~~~~~~d----~~~l~~~ 260 (434)
++..+++.... ..+..|+...++|.+....+...+....+ +|.+.. +.+ ++.|++.
T Consensus 114 a~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~l~~~ 190 (425)
T PRK08088 114 AVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH---GVSEDDAIASIERI 190 (425)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc---CccHHHHHHHHHHH
Confidence 77766665431 23456777799999887665555432111 221111 122 4457776
Q ss_pred HHHHHhcCCCeeEEEEe-cCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCC
Q 013892 261 LEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKD 339 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~ 339 (434)
++... .+.++.+|++. ..+|+++...+.+.+++|.++|+++|+++|+||+|.++.+.+. ..++. ..+ ..+
T Consensus 191 l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~--~~~~~----~~~-~~p- 261 (425)
T PRK08088 191 FKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGT--LFAME----QMG-VAA- 261 (425)
T ss_pred HHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc--hhHHh----hcC-CCC-
Confidence 65311 11256666655 4488888889999999999999999999999999998655432 21211 111 113
Q ss_pred ceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHH
Q 013892 340 ISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGI 418 (434)
Q Consensus 340 ~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l 418 (434)
-+.||||.+ + +|+|+||+++ ++++++.+..... .+.+.+++.|.++..+++.... ++..++.++..+.+
T Consensus 262 ----di~s~sK~l-~-~G~rig~v~~---~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~ 331 (425)
T PRK08088 262 ----DLTTFAKSI-A-GGFPLAGVTG---RAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQ-ENLLQKANALGEKL 331 (425)
T ss_pred ----CEEEEeccc-c-CCCcceeeEe---cHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHH
Confidence 368999999 5 8999999988 8999988865443 5667889999999998875321 23344444444444
Q ss_pred HHHHHHH
Q 013892 419 LSSLARR 425 (434)
Q Consensus 419 ~~~L~~~ 425 (434)
.+.|.+.
T Consensus 332 ~~~l~~l 338 (425)
T PRK08088 332 KDGLLAI 338 (425)
T ss_pred HHHHHHH
Confidence 4444443
No 227
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.73 E-value=4.5e-16 Score=157.07 Aligned_cols=266 Identities=11% Similarity=0.045 Sum_probs=163.5
Q ss_pred CCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
..+||+..+ -..-+|++++++.+.++.... ....+ .. +..+.+++.+.+..+ .+.+++++++++|
T Consensus 31 ~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~-~~~~~-~~----~~~~~~~~~l~~~~~----~~~~~~~~SGs~A 100 (400)
T PTZ00125 31 KKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTL-TSRAF-YN----DVLGLAEKYITDLFG----YDKVLPMNSGAEA 100 (400)
T ss_pred CEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccc-ccccc-cC----HHHHHHHHHHHhCCC----CCEEEEeCCcHHH
Confidence 345666554 122478899999888875432 11111 11 233444444443333 3578899999999
Q ss_pred HHHHHHHHhc---------CCCCEEEEcCCCChhHHHH-HHHcCCeEEE--E-ecCCCC--CCCCCHHHHHHHHHHHHhc
Q 013892 203 VHMMMQLLIR---------SENDGILCPIPQYPLYSAS-IALHGGTLVP--Y-YLDEAT--GWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 203 l~~~l~~l~~---------~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~--~-~~~~~~--~~~~d~~~l~~~l~~~~~~ 267 (434)
+..+++.+.. ..+++|++.+-.|...... +...+..... + +....- -...|+++|++.++.
T Consensus 101 ~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---- 176 (400)
T PTZ00125 101 GETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD---- 176 (400)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC----
Confidence 9999987641 1346788888777765433 3332221110 0 000000 001388999998852
Q ss_pred CCCeeEEEEecCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 268 GITVRALVVINPGNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
.++++|++..++||||.+++ .+.+++|.++|++||+++|+||+|.++.+.+. .... ......+| ++
T Consensus 177 -~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~--~~~~-----~~~~~~pd--~~--- 243 (400)
T PTZ00125 177 -PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGK--LLAH-----DHEGVKPD--IV--- 243 (400)
T ss_pred -CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hhHH-----HhcCCCCC--EE---
Confidence 17889988888999999996 45699999999999999999999988555442 1111 11112245 23
Q ss_pred cCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 347 SVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 347 S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++||.+ +..++|+||+++ ++++++.+..... .+.+.+++.+.++...++.-+. +...++.++..+.+.+.|++.
T Consensus 244 ~~sK~l-~~g~~~ig~v~~---~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~-~~~~~~~~~~~~~l~~~l~~l 318 (400)
T PTZ00125 244 LLGKAL-SGGLYPISAVLA---NDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKE-EKLAENAQRLGEVFRDGLKEL 318 (400)
T ss_pred EEcccc-cCCCcCcEEEEE---cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHH
Confidence 478999 433359999987 8899888765432 4456778888877665542111 134455566666677776654
No 228
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.73 E-value=4.5e-15 Score=150.78 Aligned_cols=196 Identities=14% Similarity=0.176 Sum_probs=142.3
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh--------
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-------- 211 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~-------- 211 (434)
++.+.++++.+.+... ...+++. ..+|++++|+++ | .+++++++|+++++..++.+++
T Consensus 42 ~~~~~~~a~~~~~~~~----~~~~G~~--~~~fe~~lA~~~----g----~~~~v~~~sGt~al~~aL~al~~~~~~~~~ 107 (438)
T PRK15407 42 IDAKELQNLVDASLDF----WLTTGRF--NDAFEKKLAEFL----G----VRYALLVNSGSSANLLAFSALTSPKLGDRA 107 (438)
T ss_pred CCHHHHHHHHHHHHhC----cccCChh--HHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHHhhccccccC
Confidence 4555566666655531 2233332 578999999997 2 3469999999999999888762
Q ss_pred cCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHH
Q 013892 212 RSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (434)
Q Consensus 212 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~ 291 (434)
..+||+|+++.|+|+.+...+...|++++.++++. .+|.+|++.+++++++ ++++|+++++ +|... +
T Consensus 108 ~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~------~tkaVi~~~~---~G~p~---d 174 (438)
T PRK15407 108 LKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSP------KTKAIMIAHT---LGNPF---D 174 (438)
T ss_pred CCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCc------CCeEEEEeCC---CCChh---h
Confidence 26899999999999999999999999999999875 3689999999999876 7999999975 34433 4
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecC--CCCCCCCCCceeEEEEEecCC
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFS 369 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~--SK~~~g~~G~R~G~~~~~~~~ 369 (434)
+++|.++|+++|++||+|++|+....-..... .. ..+ +.+.|| +|.+. +|- +|+++. .+
T Consensus 175 l~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~-------G~----~gd---~~~fSf~~~k~~~--~ge-GG~l~t--~d 235 (438)
T PRK15407 175 LAAVKAFCDKHNLWLIEDNCDALGSTYDGRMT-------GT----FGD---IATLSFYPAHHIT--MGE-GGAVFT--ND 235 (438)
T ss_pred HHHHHHHHHHCCCEEEEECccchhhhcCCeee-------ec----cCc---eEEEeCCCCCCcc--ccC-ceEEEE--CC
Confidence 89999999999999999999986432222111 11 123 444555 46663 455 788875 47
Q ss_pred HHHHHHHHHHhh
Q 013892 370 AEVREQIYKVAS 381 (434)
Q Consensus 370 ~~~~~~l~~~~~ 381 (434)
+++.+.+..++.
T Consensus 236 ~~l~~~~~~~~~ 247 (438)
T PRK15407 236 PLLKKIIESFRD 247 (438)
T ss_pred HHHHHHHHHHHH
Confidence 888877766543
No 229
>PLN02651 cysteine desulfurase
Probab=99.73 E-value=4.4e-16 Score=155.22 Aligned_cols=249 Identities=16% Similarity=0.184 Sum_probs=158.2
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCC-CC--CC--CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh
Q 013892 137 QGLFSADSIERAWQILDQIPGRATG-AY--SH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~~~~-~Y--~~--~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 211 (434)
...+|+.+++++.+.+......... .+ .. ..-+.++|+.+++++ | .++++|++|+|+++++..++..+.
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~v~~t~~~t~a~~~~l~~~~ 81 (364)
T PLN02651 8 TTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI----G--ADPKEIIFTSGATESNNLAIKGVM 81 (364)
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCCHHHHHHHHHHHHH
Confidence 3357888999988877542210000 11 11 011345566666655 4 467899999999999888776542
Q ss_pred ---cCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 212 ---RSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 212 ---~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
..+||+|+++...|+.+... ++..|++++.++.++ ++.+|++++++++++ +++++++++++||||.
T Consensus 82 ~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~v~~~~n~tG~ 153 (364)
T PLN02651 82 HFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS--DGLVDLDELAAAIRP------DTALVSVMAVNNEIGV 153 (364)
T ss_pred HhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCC------CcEEEEEECCCCCcee
Confidence 15789999999888765443 345689999998864 357899999999976 7899999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+.+ +++|.++|+++|+++++|.++...... ..+ ..+ ..| +++.|..| |.|.+| +|++.+
T Consensus 154 ~~~---l~~I~~~~~~~g~~~~vD~a~~~g~~~-----~~~----~~~---~~D---~~~~s~hK-~~gp~G--~g~l~v 212 (364)
T PLN02651 154 IQP---VEEIGELCREKKVLFHTDAAQAVGKIP-----VDV----DDL---GVD---LMSISGHK-IYGPKG--VGALYV 212 (364)
T ss_pred ccc---HHHHHHHHHHcCCEEEEEcchhhCCcc-----cCc----ccC---CCC---EEEechhh-hCCCCc--eEEEEE
Confidence 998 889999999999999999998753211 111 111 134 67788899 535333 677765
Q ss_pred ecCCHHHHHHHHHHh--------hcccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQIYKVA--------SVNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 366 ~~~~~~~~~~l~~~~--------~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
.++..+.+.... .....++..+...+...++-- +..+...++.++.++.+.+.|+
T Consensus 213 ---~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~ 276 (364)
T PLN02651 213 ---RRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLR 276 (364)
T ss_pred ---cCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 443333322110 122345555555555544321 1123334444555555555544
No 230
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.73 E-value=7.2e-16 Score=154.29 Aligned_cols=233 Identities=16% Similarity=0.170 Sum_probs=156.7
Q ss_pred Cccccccc----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHH
Q 013892 129 SILDRSET----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al 203 (434)
..||+..+ ..+..|++++++.+.+.... .+.. .-..++++++++.+.. .++ .+++++++++++
T Consensus 30 ~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~-----~~~~-~~~~~~~~~la~~l~~------~~~~~~~~~~SGseA~ 97 (375)
T PRK04260 30 KYLDFSSGIGVTNLGFHPQVQQALQKQAGLIW-----HSPN-LYLNSLQEEVAQKLIG------DKDYLAFFCNSGAEAN 97 (375)
T ss_pred EEEECCCCcccccCCCCHHHHHHHHHHHHhcC-----cccC-ccCCHHHHHHHHHHhc------CcCCEEEEcCccHHHH
Confidence 35666544 23457889999998887632 1222 2246788889887632 123 468899999999
Q ss_pred HHHHHHHhc-CCCCEEEEcCCCChhHH-HHHHHcCCeEE---------EEecCCCCCCCCCHHHHHHHHHHHHhcCCCee
Q 013892 204 HMMMQLLIR-SENDGILCPIPQYPLYS-ASIALHGGTLV---------PYYLDEATGWGLETSEVKKQLEAAKAKGITVR 272 (434)
Q Consensus 204 ~~~l~~l~~-~~gd~Vlv~~p~y~~~~-~~~~~~g~~~~---------~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~ 272 (434)
..+++.... ..+++|++.+..|.... ..+...|.... .++.. . ..|++.+++.+++ ++.
T Consensus 98 ~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~dl~~l~~~l~~------~~a 167 (375)
T PRK04260 98 EAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA---I-FNDLNSVKALVNK------NTA 167 (375)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe---C-CCCHHHHHHhcCC------CeE
Confidence 988877631 24678999888887533 33333332111 01110 0 1378888887754 677
Q ss_pred EEEEecCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCC
Q 013892 273 ALVVINPGNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKG 351 (434)
Q Consensus 273 ~i~l~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~ 351 (434)
+|++..++|++|.+.+ .+.+++|.++|+++|+++|+||+|.++...+. ..... ... ..+| +.||||+
T Consensus 168 ~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~--~~~~~--~~~---~~pd-----i~t~sK~ 235 (375)
T PRK04260 168 AVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGK--LYAFE--HYG---IEPD-----IFTLAKG 235 (375)
T ss_pred EEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc--hhhhH--hhC---CCCC-----EEEeccc
Confidence 8888899999999754 57899999999999999999999988544332 11111 111 2256 2389999
Q ss_pred CCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC
Q 013892 352 YYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP 400 (434)
Q Consensus 352 ~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~ 400 (434)
+ + +|+|+||+++ ++++.+.+..... .+.+.+++.+.++..+++.
T Consensus 236 l-~-~G~~ig~~~~---~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~ 280 (375)
T PRK04260 236 L-A-NGVPVGAMLA---KSSLGGAFGYGSHGSTFGGNKLSMAAASATLDI 280 (375)
T ss_pred c-c-CCcceEEEEE---cHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 9 4 7999999988 8888888764322 4456788889988888854
No 231
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=5e-15 Score=148.24 Aligned_cols=201 Identities=18% Similarity=0.216 Sum_probs=154.0
Q ss_pred CCCHHHHHHHHHHHHcCCCC-CCCCCCCCc----chHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHHh-
Q 013892 139 LFSADSIERAWQILDQIPGR-ATGAYSHSQ----GIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLI- 211 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~-~~~~Y~~~~----G~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~l~~l~- 211 (434)
..|..|++++.+.+.....+ ....|.... -+++.|+.+|+++ +.+ .++|++|.|+|+++.+++..+.
T Consensus 33 ~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~------~a~~~~eIvft~~tT~aln~va~~l~~ 106 (405)
T COG0520 33 QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL------NADSSDEIVFTRGTTEALNLVARGLGR 106 (405)
T ss_pred cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEEeCChhHHHHHHHHHhhh
Confidence 36889999998887654321 122333332 3567888888887 345 4899999999999999999983
Q ss_pred -cCCCCEEEEcCCCChh----HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC
Q 013892 212 -RSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (434)
Q Consensus 212 -~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~ 286 (434)
..+||+|++.+-.|+. +....+..|++++.+|++++ ..++.+.++..+++ ++|+|.+++.+|.||.+
T Consensus 107 ~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~--g~~~~~~~~~~i~~------~Tklvais~vSn~tG~~ 178 (405)
T COG0520 107 SLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDD--GLLDLDALEKLITP------KTKLVALSHVSNVTGTV 178 (405)
T ss_pred hhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCC--CCcCHHHHHHhcCC------CceEEEEECcccccccc
Confidence 2689999999988874 55566667999999999843 48899999998887 89999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 287 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
.+ +++|+++|+++|+++++|.+++-.... ..+ ..++ -| +++.|-.|.+.|-.| +|.+.+
T Consensus 179 ~p---v~~I~~la~~~ga~v~VDaaq~~~h~~-----idv----~~l~---~D---f~afsgHKwl~gP~G--iGvLy~- 237 (405)
T COG0520 179 NP---VKEIAELAHEHGALVLVDAAQAAGHLP-----IDV----QELG---CD---FLAFSGHKWLLGPTG--IGVLYV- 237 (405)
T ss_pred ch---HHHHHHHHHHcCCEEEEECccccCccC-----CCc----hhcC---CC---EEEEcccccccCCCc--eEEEEE-
Confidence 99 999999999999999999997752221 111 1222 34 778899996656446 676765
Q ss_pred cCCHHHHHHH
Q 013892 367 GFSAEVREQI 376 (434)
Q Consensus 367 ~~~~~~~~~l 376 (434)
.+++.+.+
T Consensus 238 --r~~~l~~l 245 (405)
T COG0520 238 --RKELLEEL 245 (405)
T ss_pred --chHHHhhc
Confidence 88888887
No 232
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.72 E-value=4.1e-15 Score=148.56 Aligned_cols=260 Identities=15% Similarity=0.118 Sum_probs=156.4
Q ss_pred ccccccc---CCCCCHHHHHHHHHHHHcCC------CCCCCCCC----CCcchHHHHHHHHHHHHhhcCCCCCCCCEEEc
Q 013892 130 ILDRSET---QGLFSADSIERAWQILDQIP------GRATGAYS----HSQGIKGLRDTIAAGIEARDGFPADPNDIFLT 196 (434)
Q Consensus 130 ~l~~~~~---~~~~p~~v~~~~~~~l~~~~------~~~~~~Y~----~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t 196 (434)
+++|++| ...-++.+.+++.+.+.... +.+..+.. ...-+.++++.+|+++ | . ++.++++
T Consensus 6 ~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~----~--~-~~~l~~~ 78 (370)
T PRK05937 6 SIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFH----G--A-PEAFIVP 78 (370)
T ss_pred eEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHh----C--C-CeEEEEC
Confidence 4555555 34456677777777776542 00122333 2223566777777776 3 2 3447788
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEE
Q 013892 197 DGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVV 276 (434)
Q Consensus 197 ~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l 276 (434)
+|....+ .+...+. ++||.|++..-.|......++......+.++ ..|+++|++.++...+.+.++.+|++
T Consensus 79 sG~~a~~-~~~~~~~-~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~~~v~v 149 (370)
T PRK05937 79 SGYMANL-GLCAHLS-SVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGRIFIFV 149 (370)
T ss_pred ChHHHHH-HHHHHhC-CCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCcEEEEE
Confidence 8775544 4555555 5788888888888888877777654444443 45899999999864332224557778
Q ss_pred ecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCC
Q 013892 277 INPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC 356 (434)
Q Consensus 277 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~ 356 (434)
++++|+||.+.+ +++|.++|+++|+++++||+|....++... ..+ ...++ .++. .+.+.||||.+ |..
T Consensus 150 ~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g--~g~---~~~~~--~~~~-~~~~~tlsK~~-g~~ 217 (370)
T PRK05937 150 CSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDG--KGF---CHSLG--YENF-YAVLVTYSKAL-GSM 217 (370)
T ss_pred ecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCC--Cch---HHhhC--CCCC-cEEEEechhhh-hcC
Confidence 899999999999 889999999999999999999976555331 111 11111 1232 35689999998 655
Q ss_pred CceeEEEEEecCCHHHHHHHHHHhh---cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHH
Q 013892 357 GKRGGYMEVTGFSAEVREQIYKVAS---VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 357 G~R~G~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
|. .++. .+++.+.+..... .....++++..++...++-- +..+..+++.++.++.+.+.|.
T Consensus 218 G~---~vl~---~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~ 282 (370)
T PRK05937 218 GA---ALLS---SSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFS 282 (370)
T ss_pred ce---EEEc---CHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcC
Confidence 63 3433 5666655543221 12234444444333333211 1123345555555555555543
No 233
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=1.4e-15 Score=151.39 Aligned_cols=211 Identities=16% Similarity=0.146 Sum_probs=159.2
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~ 244 (434)
...|.+.+|++ .| .+..+++++++.|+..++..++ ++||.|+++...|.+....+ +..|.++..++.
T Consensus 64 ~~~le~~la~L----Eg----~~~a~~~~SGmaAi~~~~~~ll-~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~ 134 (395)
T PRK08114 64 HFSLQEAMCEL----EG----GAGCALYPCGAAAVANAILAFV-EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP 134 (395)
T ss_pred HHHHHHHHHHH----hC----CCeEEEEhHHHHHHHHHHHHHc-CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 34555566654 23 4578888889999999988888 79999999999997766554 567999888763
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC--CEEEEccCCCCCccCCCCC
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG--LVLLADEVYQENVYVPEKK 322 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~--~~li~Deay~~~~~~~~~~ 322 (434)
.|.+.+++++++ ++|+|++.+|.||+|.+.+ +++|+++|+++| +++++|.++.....-+.
T Consensus 135 -------~d~~~l~~~l~~------~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~p-- 196 (395)
T PRK08114 135 -------LIGADIAKLIQP------NTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVLFKA-- 196 (395)
T ss_pred -------CCHHHHHHhcCC------CceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccccCH--
Confidence 367889998876 7999999999999999999 999999999984 99999999976333111
Q ss_pred ccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC
Q 013892 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP 401 (434)
Q Consensus 323 ~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~ 401 (434)
..++ -| |+++|.+|.++|....-+|.++. +++..+.+..... ...+.++...+. +++.-
T Consensus 197 --------l~~G---aD---ivv~S~tKyl~Ghsdv~~G~v~~---~~~~~~~l~~~~~~~G~~~~p~~a~l---~~rgl 256 (395)
T PRK08114 197 --------LDFG---ID---ISIQAGTKYLVGHSDAMIGTAVA---NARCWEQLRENSYLMGQMVDADTAYM---TSRGL 256 (395)
T ss_pred --------HHcC---Cc---EEEEcCcccccCCCcceeEEEEc---CHHHHHHHHHHHHhccCCCCHHHHHH---HHcCC
Confidence 1122 34 89999999998766678886654 6667666665443 444555555554 44445
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 402 KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 402 ~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+.+.-+.++..++...+.+.|+++.
T Consensus 257 ~TL~lR~~~~~~na~~va~~L~~hp 281 (395)
T PRK08114 257 RTLGVRLRQHEESSLKVAEWLAEHP 281 (395)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6667788999999999999999765
No 234
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.71 E-value=2.1e-15 Score=149.97 Aligned_cols=212 Identities=17% Similarity=0.205 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----cCCeEEEEecC
Q 013892 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYLD 245 (434)
Q Consensus 170 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~~~~~ 245 (434)
..+.+.+++.. | .+.+++++++..|+..++..++ ++||.|+++...|.+....++. .|.++..++.
T Consensus 58 ~~le~~la~Le----~----g~~a~~~~SGmaAi~~~l~~ll-~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~- 127 (386)
T PF01053_consen 58 RALEQRLAALE----G----GEDALLFSSGMAAISAALLALL-KPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP- 127 (386)
T ss_dssp HHHHHHHHHHH----T-----SEEEEESSHHHHHHHHHHHHS--TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-
T ss_pred HHHHHHHHHhh----c----ccceeeccchHHHHHHHHHhhc-ccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc-
Confidence 45556665554 3 3678999999999999999998 7999999999999987766554 6899888753
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEccCCCCCccCCCCCcc
Q 013892 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG-LVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 246 ~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~-~~li~Deay~~~~~~~~~~~~ 324 (434)
-|++++++++++ ++++|++..|.||+..+.+ +++|+++|+++| +++++|..+....+-..
T Consensus 128 ------~d~~~l~~~l~~------~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~~p---- 188 (386)
T PF01053_consen 128 ------TDLEALEAALRP------NTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQNP---- 188 (386)
T ss_dssp ------TSHHHHHHHHCT------TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC-G----
T ss_pred ------hhHHHHHhhccc------cceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceeeecc----
Confidence 379999999988 8999999999999988888 999999999998 99999999987433211
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCC
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKV 403 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~ 403 (434)
+ .++ -| |+++|++|.++|....-+|.+++ +..+++.+.+..... ...+.++...+.+..-+ +.
T Consensus 189 -L-----~~G---aD---ivv~S~TKyl~Ghsdv~~G~vv~-~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl---~T 252 (386)
T PF01053_consen 189 -L-----ELG---AD---IVVHSATKYLSGHSDVMGGAVVV-NGSSELYDRLREFRRLLGATLSPFDAWLLLRGL---RT 252 (386)
T ss_dssp -G-----GGT----S---EEEEETTTTTTTSSSE-EEEEEE-SSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHH---TT
T ss_pred -C-----cCC---ce---EEEeeccccccCCcceeeEEEEE-CchhhhhhhhcchhhhcCccchHHHHHHHhcCC---Cc
Confidence 1 111 23 88999999998776677888875 213688888877665 45456666666555555 34
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHH
Q 013892 404 GDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 404 ~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+..+.++..++...+.+.|+++.
T Consensus 253 l~~R~~~~~~nA~~lA~~L~~hp 275 (386)
T PF01053_consen 253 LPLRMERQNENAEALAEFLEEHP 275 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC
Confidence 56777888888888999888763
No 235
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=2.8e-15 Score=151.81 Aligned_cols=213 Identities=18% Similarity=0.180 Sum_probs=151.9
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~ 244 (434)
..+|++.+|++. | .+..++|+++++|+.+++..++ .+||+|+++...|......+ ...|++++.++.
T Consensus 66 ~~~le~~lA~l~----g----~~~av~~sSGt~Al~~al~~ll-~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 66 VAVLEERVAALE----G----GVGAIATASGQAALHLAIATLM-GAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 677888888886 3 2347889999999999998887 79999999999998665544 447999998875
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
+ |+++++++|++ ++|+|++.+|+||+|.+.+ +++|.++|+++|+++|+|.++....... +
T Consensus 137 ~-------d~~~l~~~i~~------~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~~--p-- 196 (433)
T PRK08134 137 G-------DIDGWRAAIRP------NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLLR--P-- 196 (433)
T ss_pred C-------CHHHHHHhcCC------CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC--c--
Confidence 3 78999999987 8999999999999999999 8999999999999999999987533211 1
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC-------------------------H-----HHHH
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-------------------------A-----EVRE 374 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~-------------------------~-----~~~~ 374 (434)
+ .++ -| ++++|.+|.++| +|-.+|.+++.+.. + .+..
T Consensus 197 -l-----~~G---aD---~vv~S~tK~l~g-~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 263 (433)
T PRK08134 197 -F-----EHG---AD---LVYHSATKFLGG-HGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLL 263 (433)
T ss_pred -h-----hcC---CC---EEEeccccccCC-CCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHH
Confidence 1 111 23 889999998844 67666666542100 0 0000
Q ss_pred HHH--HHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 375 QIY--KVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 375 ~l~--~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
... .......+.+.. -+..+++.-+.+....++..++...+.+.|+.+.
T Consensus 264 ~~~~~~~~~~G~~ls~~---~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p 314 (433)
T PRK08134 264 RARREGLRDFGACLSPM---NAWQLLQGIETLPLRMERHVANTRKVVAFLASHP 314 (433)
T ss_pred HHHHHHHHhcCCCCCHH---HHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 111 011122233333 3444555556677888888888888888888654
No 236
>PLN02624 ornithine-delta-aminotransferase
Probab=99.69 E-value=4.8e-15 Score=152.27 Aligned_cols=270 Identities=13% Similarity=0.114 Sum_probs=168.6
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|.+++++.+.+.+... ....|. .....+|.+.+++++ + .+.+++++++++
T Consensus 74 G~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~-~~~~~~-~~~~~~la~~L~~~~----~----~~~~~f~~SGse 143 (474)
T PLN02624 74 GKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTL-SSRAFY-NDKFPEFAEYLTSMF----G----YDMVLPMNTGAE 143 (474)
T ss_pred CCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCC-cccccC-CHHHHHHHHHHHhhc----C----CCeEEEeCChHH
Confidence 3446676555 123389999999999887532 111122 233455556665543 3 358999999999
Q ss_pred HHHHHHHHHhc------C-C-C-CEEEEcCCCChhHHHHHHHcCCeEE---EE-ecCCC---CCCCCCHHHHHHHHHHHH
Q 013892 202 AVHMMMQLLIR------S-E-N-DGILCPIPQYPLYSASIALHGGTLV---PY-YLDEA---TGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 202 al~~~l~~l~~------~-~-g-d~Vlv~~p~y~~~~~~~~~~g~~~~---~~-~~~~~---~~~~~d~~~l~~~l~~~~ 265 (434)
++..+++.... + + + ..|+...-+|.+............. .+ |.... -.| .|++.|++.++.
T Consensus 144 A~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~-- 220 (474)
T PLN02624 144 GVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEE-- 220 (474)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHh--
Confidence 99999876541 0 1 2 3577777777765433222211110 00 00000 001 268889888864
Q ss_pred hcCCCeeEEEEecCCCCCccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEE
Q 013892 266 AKGITVRALVVINPGNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVS 344 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~ 344 (434)
.+.++.+|++..++|++|.+++.+ .+++|.++|++||+++|+||+|.++.+.+. ...+ +.....+| ++
T Consensus 221 -~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~--~~a~-----~~~~i~pD--iv- 289 (474)
T PLN02624 221 -DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGK--MLAC-----DWEEVRPD--VV- 289 (474)
T ss_pred -CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcc--hhhH-----HhcCCCCC--EE-
Confidence 223688888888999999998877 599999999999999999999998544432 1111 11112244 33
Q ss_pred EecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHH
Q 013892 345 FQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 345 i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
+|||.+ |..++++|+++. ++++++.+..... .+.+.+++.+.++...++..+. .+..+...+..+.+.+.|+
T Consensus 290 --~lsK~l-ggG~~pigav~~---~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~-~~l~~~~~~~~~~l~~~L~ 362 (474)
T PLN02624 290 --ILGKAL-GGGVIPVSAVLA---DKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQD-EKLAERSAKLGQELRDQLQ 362 (474)
T ss_pred --Eecccc-cCCCCcceeeee---cHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHH
Confidence 368999 655699999987 7788777654332 4446788888888777753211 1344555666677777776
Q ss_pred HHHH
Q 013892 424 RRAK 427 (434)
Q Consensus 424 ~~~~ 427 (434)
+...
T Consensus 363 ~l~~ 366 (474)
T PLN02624 363 KIQK 366 (474)
T ss_pred HHHH
Confidence 6543
No 237
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.68 E-value=1e-14 Score=148.43 Aligned_cols=274 Identities=15% Similarity=0.105 Sum_probs=167.8
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-++.+.+++.+.+..... ....|. ..+.+..+|+.+.+..+ ..-+.+++++++++
T Consensus 40 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~----~~~~~~~la~~L~~~~p--~~~~~v~f~~sGsE 112 (443)
T PRK08360 40 GNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIH-YTPIYG----FPVEPLLLAEKLIEIAP--GDNPKVSFGLSGSD 112 (443)
T ss_pred CCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccC-cccccc----CcHHHHHHHHHHHHhCC--CCCCEEEEcCCHHH
Confidence 3445666554 234578899999998876421 011122 22344455555544322 22358999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHH-HHHcCC------------eEEEEecCCC--CCCC--------CCHHHH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSAS-IALHGG------------TLVPYYLDEA--TGWG--------LETSEV 257 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~-~~~~g~------------~~~~~~~~~~--~~~~--------~d~~~l 257 (434)
|+..+++.... .....|+...-.|.+.... +...|. .+..++.... ..|. .+++.+
T Consensus 113 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (443)
T PRK08360 113 ANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYI 192 (443)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHH
Confidence 99999887542 2346788888777765422 222221 1122222110 0011 123445
Q ss_pred HHHHHHHHhcCCCeeEEEEecCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 258 ~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
++.++... .+.++.+|++.-.+||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.+. +...... + .
T Consensus 193 ~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~--~~a~~~~--~---~ 264 (443)
T PRK08360 193 KEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGK--WFAIEHF--G---V 264 (443)
T ss_pred HHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc--chhhhhc--C---C
Confidence 55554311 1236777777643799999887 55799999999999999999999999665543 2221111 1 2
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r 415 (434)
.+| ++ +|||++ | +|+|+||+++ ++++++.+.... ..+.+.+++.+.++...++.-+. ++.+++.++.-
T Consensus 265 ~pD--ii---tlsK~l-~-~G~pigav~~---~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~-~~l~~~~~~~g 333 (443)
T PRK08360 265 EPD--II---TLGKPL-G-GGLPISATIG---RAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE-KNLLKRAEKLG 333 (443)
T ss_pred CCC--EE---Eecccc-c-CCceeEEEEE---cHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH-cCHHHHHHHHH
Confidence 255 33 679999 5 7999999987 889998886543 24556778888888777754211 13556666666
Q ss_pred HHHHHHHHHHH
Q 013892 416 DGILSSLARRA 426 (434)
Q Consensus 416 ~~l~~~L~~~~ 426 (434)
+.+.+.|++..
T Consensus 334 ~~l~~~L~~l~ 344 (443)
T PRK08360 334 NYTKKRLEEMK 344 (443)
T ss_pred HHHHHHHHHHH
Confidence 67777776653
No 238
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.68 E-value=9.2e-15 Score=146.05 Aligned_cols=202 Identities=18% Similarity=0.249 Sum_probs=150.2
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCC-CCCCCCCc----chHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHH
Q 013892 137 QGLFSADSIERAWQILDQIPGRA-TGAYSHSQ----GIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLL 210 (434)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~~-~~~Y~~~~----G~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l 210 (434)
....|+.|++++.+.+....... ...+.... -+.++|+.+++++ | +++ ++|++++|+++++..++..+
T Consensus 8 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l----g--~~~~~~v~~~~~~t~a~~~~~~~l 81 (371)
T PF00266_consen 8 TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL----G--APPDEEVVFTSNGTEALNAVASSL 81 (371)
T ss_dssp S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH----T--SSTTEEEEEESSHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc----C--Cccccccccccccchhhhhhhhcc
Confidence 44678999999998877543211 11222222 2346677777776 4 455 78999999999999999999
Q ss_pred ---hcCCCCEEEEcCCCChhHH----HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC
Q 013892 211 ---IRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (434)
Q Consensus 211 ---~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt 283 (434)
. ++|++|++..-.|+... ...+..|+++..++.+.+. .+|+++++++|++ ++++|++++.+|-|
T Consensus 82 ~~~~-~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~--~~~~~~~~~~l~~------~~~lv~~~~~~~~t 152 (371)
T PF00266_consen 82 LNPL-KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGG--SLDLEDLEEALNP------DTRLVSISHVENST 152 (371)
T ss_dssp HHHG-TTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTS--SCSHHHHHHHHHT------TESEEEEESBETTT
T ss_pred cccc-ccccccccccccccccccccccccccchhhhccccccccc--hhhhhhhhhhhcc------ccceEEeecccccc
Confidence 5 68999999999998755 3344679999999887553 7799999999976 89999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEE
Q 013892 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM 363 (434)
Q Consensus 284 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~ 363 (434)
|...+ +++|.++|+++|+++++|.++.-.... . ++.....| +++.|..| |.|-+| +|++
T Consensus 153 G~~~p---i~~I~~~~~~~~~~~~vD~~~~~g~~~-----i-------d~~~~~~D---~~~~s~~K-l~gp~G--~g~l 211 (371)
T PF00266_consen 153 GVRNP---IEEIAKLAHEYGALLVVDAAQSAGCVP-----I-------DLDELGAD---FLVFSSHK-LGGPPG--LGFL 211 (371)
T ss_dssp TBBSS---HHHHHHHHHHTTSEEEEE-TTTTTTSS--------------TTTTTES---EEEEESTS-TTSSST--EEEE
T ss_pred cEEee---eceehhhhhccCCceeEechhcccccc-----c-------cccccccc---eeeecccc-cCCCCc--hhhh
Confidence 99999 999999999999999999998753221 1 11111133 68889999 767666 5888
Q ss_pred EEecCCHHHHHHHH
Q 013892 364 EVTGFSAEVREQIY 377 (434)
Q Consensus 364 ~~~~~~~~~~~~l~ 377 (434)
.+ +++.++.+.
T Consensus 212 ~v---~~~~~~~~~ 222 (371)
T PF00266_consen 212 YV---RPEAIERLR 222 (371)
T ss_dssp EE---EHHHHHHHH
T ss_pred ee---hhhhhhccc
Confidence 77 888888884
No 239
>PLN00144 acetylornithine transaminase
Probab=99.68 E-value=5.4e-15 Score=148.03 Aligned_cols=251 Identities=12% Similarity=0.057 Sum_probs=158.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc--C---
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--S--- 213 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~--~--- 213 (434)
.-+|++.+++.+.+..... ...+. ..+....+|+.+.+.. ..+.+++++++++++..+++.... .
T Consensus 31 h~~p~v~~ai~~q~~~~~~--~~~~~----~~~~~~~la~~l~~~~----~~~~v~f~~sGseA~e~AlklAr~~~~~~~ 100 (382)
T PLN00144 31 HGDPDWVKAVAEQAGTLAH--VSNVY----HTIPQVELAKRLVASS----FADRVFFCNSGTEANEAAIKFARKYQRVRA 100 (382)
T ss_pred CCCHHHHHHHHHHHHhcCC--ccccc----cCHHHHHHHHHHHhcC----CCCeEEEeCCcHHHHHHHHHHHHHHHhccC
Confidence 3477899999998876432 11111 1233445555554432 246899999999999999887531 1
Q ss_pred ---C------CCEEEEcCCCChhHHHHHHHcCCeE-E---EEecCCCCCC--CCCHHHHHHHHHHHHhcCCCeeEEEEec
Q 013892 214 ---E------NDGILCPIPQYPLYSASIALHGGTL-V---PYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVIN 278 (434)
Q Consensus 214 ---~------gd~Vlv~~p~y~~~~~~~~~~g~~~-~---~~~~~~~~~~--~~d~~~l~~~l~~~~~~g~~~~~i~l~~ 278 (434)
+ ..+|+....+|.+............ . ..+...+..+ -.|++.|++.+... ++++|++.-
T Consensus 101 ~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~-----~~aavi~eP 175 (382)
T PLN00144 101 PDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKG-----KTAAVFVEP 175 (382)
T ss_pred CCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCC-----CeEEEEEcc
Confidence 0 2578988888887665443322211 0 0010000000 12688888877431 577777663
Q ss_pred CCCCCccCCC--HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCC
Q 013892 279 PGNPTGQVLA--EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC 356 (434)
Q Consensus 279 p~NPtG~~~~--~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~ 356 (434)
-+|| |.+++ .+.+++|.++|++||+++|+||+|.++.+.+. +... . ... ..|| +.+|||+++ +
T Consensus 176 ~q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~--~~~~-~-~~~---~~PD-----i~t~sK~l~--~ 240 (382)
T PLN00144 176 VQGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGY--LWAH-E-AYG---VEPD-----IMTLAKPLA--G 240 (382)
T ss_pred ccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch--Hhhh-h-hcC---CCCC-----EEEeccccc--C
Confidence 3899 54544 44599999999999999999999999655543 1111 0 112 2356 568899994 7
Q ss_pred CceeEEEEEecCCHHHHHHHHHH-hhcccCCchHHHHHHHH---HcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 357 GKRGGYMEVTGFSAEVREQIYKV-ASVNLCSNISGQILASL---VMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 357 G~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~---~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
|+|+||+++ ++++++.+... ...+...+++.+.++.. +++++ +..++.++.++.+.+.|++..
T Consensus 241 G~pig~v~~---~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~----~~~~~~~~~g~~l~~~l~~~~ 307 (382)
T PLN00144 241 GLPIGAVLV---TEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKP----GFLASVAKKGEYLRELLRRKL 307 (382)
T ss_pred CcceEEEEE---cHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhc----hHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 88998887543 23455788888888884 44432 455566666666666666543
No 240
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.68 E-value=7.2e-15 Score=148.13 Aligned_cols=256 Identities=12% Similarity=0.104 Sum_probs=166.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-----C
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----S 213 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-----~ 213 (434)
.-+|.+++++.+.+..... . .... ..+....+++.+....+ ..+.+++++++++|+..+++.... +
T Consensus 56 h~~p~v~~ai~~q~~~~~~--~---~~~~-~~~~~~~la~~L~~~~~---~~~~v~f~~sGseA~e~AlklAr~~~~~~g 126 (408)
T PRK04612 56 HNDPDLVAALTEQAGKLWH--T---SNVF-YSAPPLKLAEELVTASR---FAEKVFLCNSGTEANEAAIKLVRKWASSQG 126 (408)
T ss_pred CCCHHHHHHHHHHHHhccc--c---cccc-CCHHHHHHHHHHHhhCC---CCCEEEEcCchHHHHHHHHHHHHHHHHhhC
Confidence 4578899999988876321 1 1111 12334455555544322 126899999999999999887541 1
Q ss_pred --C-CCEEEEcCCCChhHHHHHHH-cCCeEEE--E-ecCCC---CCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC
Q 013892 214 --E-NDGILCPIPQYPLYSASIAL-HGGTLVP--Y-YLDEA---TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (434)
Q Consensus 214 --~-gd~Vlv~~p~y~~~~~~~~~-~g~~~~~--~-~~~~~---~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt 283 (434)
+ ..+|+....+|.+....... .|..... + ++... -.| .|++.+++.++. +..+.++..|.+++
T Consensus 127 ~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~------~~~aavi~eP~~~~ 199 (408)
T PRK04612 127 RPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMAG------GDVAAVMLEPIQGE 199 (408)
T ss_pred CCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhCC------CCEEEEEECCccCC
Confidence 1 24689888888876544332 2211100 0 11100 011 278888887753 45677888898888
Q ss_pred ccCCC--HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeE
Q 013892 284 GQVLA--EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG 361 (434)
Q Consensus 284 G~~~~--~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G 361 (434)
|.+++ .+.+++|.++|+++|+++|+||+|.++.+.+. +... .. .+ ....+.+|||.+ | .|+|+|
T Consensus 200 gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~~a~---~~------~~-~~pdi~t~~K~l-~-~G~pig 265 (408)
T PRK04612 200 GGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGT--LFAH---WQ------EQ-VTPDIVTLAKAL-G-GGFPIG 265 (408)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--hhhh---hh------cC-CCCCEEEEcchh-c-CCCceE
Confidence 87766 56899999999999999999999998655442 2111 10 11 124467999999 5 799999
Q ss_pred EEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 013892 362 YMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKA 428 (434)
Q Consensus 362 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 428 (434)
|+++ ++++++.+.... ..+.+.+++.+.++...|+.-+. ++..++.++.-+.+.+.|++....
T Consensus 266 a~~~---~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~-~~l~~~~~~~g~~l~~~l~~l~~~ 329 (408)
T PRK04612 266 AMLA---GPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS-PQIAANVARQSAALRAGLEALNAE 329 (408)
T ss_pred EEEE---CHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhh
Confidence 9987 788888776533 34556789999988888764322 356677777777888888776543
No 241
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.67 E-value=4.1e-14 Score=138.46 Aligned_cols=194 Identities=15% Similarity=0.230 Sum_probs=149.3
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
-.+.++++.+.++.. ....++ -..++.+++++|+ .....+.++++|.|+.+++++|--.+||+|++
T Consensus 14 ~~~e~~~v~~vl~sg----~i~~G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ 79 (374)
T COG0399 14 GEEELAAVQEVLKSG----WLTGGP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIV 79 (374)
T ss_pred chHHHHHHHHHHHcC----CeecCh--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEe
Confidence 456677777777763 222233 2688999999997 45678889999999999999664379999999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC-CCCCccCCCHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p-~NPtG~~~~~~~l~~i~~~~ 299 (434)
|.-+|....+.+...|++++.++++.+ +|.+|++.++++|++ ++|+|+..+- ++|. + +++|.++|
T Consensus 80 ps~TfvATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~------~tKAIipVhl~G~~~----d---m~~i~~la 145 (374)
T COG0399 80 PSFTFVATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITP------RTKAIIPVHLAGQPC----D---MDAIMALA 145 (374)
T ss_pred cCCchHHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHccc------CCeEEEEehhccCCC----C---HHHHHHHH
Confidence 999999999999999999999999875 689999999999998 7999998865 5554 4 88999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecC--CCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 300 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~--SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
++||++||+|.+++-...-..+... .+.+ +.+.|| .|.+. +| -+|.++. .++++.+.+.
T Consensus 146 ~~~~l~vIEDaAqa~Ga~y~gk~vG-----------t~Gd---~~~fSF~~~K~it--tg-EGGav~t--nd~ela~k~~ 206 (374)
T COG0399 146 KRHGLPVIEDAAQAHGATYKGKKVG-----------SFGD---IGAFSFHATKNLT--TG-EGGAVVT--NDEELAEKAR 206 (374)
T ss_pred HHcCCeEEEEcchhccCeecCcccc-----------cccc---eEEEEecCCCCcc--cc-CceEEEe--CCHHHHHHHH
Confidence 9999999999998754322221111 1223 333343 79884 67 6887764 4899999988
Q ss_pred HHhh
Q 013892 378 KVAS 381 (434)
Q Consensus 378 ~~~~ 381 (434)
.++.
T Consensus 207 ~lr~ 210 (374)
T COG0399 207 SLRN 210 (374)
T ss_pred HHHH
Confidence 7654
No 242
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=1.2e-14 Score=147.10 Aligned_cols=215 Identities=16% Similarity=0.112 Sum_probs=149.1
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~ 244 (434)
...|.+.+|++. | .+..+++++++.|+..++..++ .+||.|+++...|...... +...|++++.++
T Consensus 71 ~~~Le~~lA~l~----g----~~~av~~sSG~aAi~~al~all-~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 71 QDVVEQRIAALE----G----GVAALLLASGQAAETFAILNLA-GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred HHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHh-CCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 456777777765 3 2346777777889999998888 7999999999888775543 344677777774
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
+. .|++.+++++++ ++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|+++.......
T Consensus 141 d~-----~d~e~l~~ai~~------~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~~~----- 201 (436)
T PRK07812 141 DP-----DDLDAWRAAVRP------NTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYLIR----- 201 (436)
T ss_pred CC-----CCHHHHHHhCCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 21 288999988876 7999999999999999999 8999999999999999999886422211
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC----------------------------HHHHHHH
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS----------------------------AEVREQI 376 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~----------------------------~~~~~~l 376 (434)
. + .++ .| ++++|++|.++| .|--+|++++.... ++++..+
T Consensus 202 p----l-~~G---aD---ivv~S~tK~lgg-~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (436)
T PRK07812 202 P----L-EHG---AD---IVVHSATKYLGG-HGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKA 269 (436)
T ss_pred c----h-hcC---CC---EEEEecccccCC-CCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHH
Confidence 1 1 111 34 677999999955 56556666542210 0111111
Q ss_pred H-HHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 377 Y-KVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 377 ~-~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
. ... ....+.++.. +..+++.-+.+..+.++..++...+.+.|+++..
T Consensus 270 ~~~~~~~~G~~l~p~~---a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~ 319 (436)
T PRK07812 270 RVQLLRDLGSAISPFN---AFLIAQGLETLSLRIERHVANAQRVAEFLEARDE 319 (436)
T ss_pred HHHHHHhcCCCCCHHH---HHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1 111 2333444443 3455555567778888999999999999988753
No 243
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.67 E-value=9.9e-15 Score=147.37 Aligned_cols=262 Identities=12% Similarity=0.090 Sum_probs=168.3
Q ss_pred CCCccccccc--CC---CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET--QG---LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~--~~---~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+||+..+ .. .-+|.+++++.+.++.... ....+ ...-..++.+.+++++ | .+.+++++++++
T Consensus 36 g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~-~~~~~-~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~ 105 (401)
T TIGR01885 36 GKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTL-SSRAF-YNDVFGEFAEYVTKLF----G----YDKVLPMNTGAE 105 (401)
T ss_pred CCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccc-ccccc-CCHHHHHHHHHHHhhc----C----CCEEEEeCccHH
Confidence 4456777766 12 2378999999998876432 11112 1222345555555543 3 358899999999
Q ss_pred HHHHHHHHHhc---------CCCCEEEEcCCCChhH-HHHHHHcCC------------eEEEEecCCCCCCCCCHHHHHH
Q 013892 202 AVHMMMQLLIR---------SENDGILCPIPQYPLY-SASIALHGG------------TLVPYYLDEATGWGLETSEVKK 259 (434)
Q Consensus 202 al~~~l~~l~~---------~~gd~Vlv~~p~y~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~d~~~l~~ 259 (434)
|+..+++.+.. ...+.|+...-+|... ...+...|. .+..++ ..|+++|++
T Consensus 106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~ 178 (401)
T TIGR01885 106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP-------YNNLEALEE 178 (401)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC-------CCCHHHHHH
Confidence 99999987531 1246788888887653 333333221 122222 127899999
Q ss_pred HHHHHHhcCCCeeEEEEecCCCCCccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCC
Q 013892 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (434)
Q Consensus 260 ~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~ 338 (434)
.++.. +.++.+|++..+++++|.+.+.+ .+++|.++|++||+++|+||+|.++.+.+. +... +.....+
T Consensus 179 ~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~--~~~~-----~~~~~~~ 248 (401)
T TIGR01885 179 ALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGK--LLCV-----DHENVKP 248 (401)
T ss_pred HHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch--hhHH-----hhcCCCC
Confidence 88643 23677777777899999998654 699999999999999999999988554442 2111 1111224
Q ss_pred CceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH-hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHH
Q 013892 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (434)
Q Consensus 339 ~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 417 (434)
| ++ ++||++ +..|+|+||++. ++++++.+... ...+.+.+++.+.++...|+..+. +...++.++..+.
T Consensus 249 d--i~---~~gK~l-~~g~~~ig~v~~---~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~-~~l~~~~~~~~~~ 318 (401)
T TIGR01885 249 D--IV---LLGKAL-SGGVYPVSAVLA---DDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEE-EKLAENAEKLGEI 318 (401)
T ss_pred C--EE---Eeeccc-cCCCCCcEEEEE---cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 5 33 467999 545599999987 88888877542 223446678888888777754221 1344566666777
Q ss_pred HHHHHHHH
Q 013892 418 ILSSLARR 425 (434)
Q Consensus 418 l~~~L~~~ 425 (434)
+.+.|++.
T Consensus 319 ~~~~L~~l 326 (401)
T TIGR01885 319 FRDQLKKL 326 (401)
T ss_pred HHHHHHhc
Confidence 77777765
No 244
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.67 E-value=3.6e-14 Score=141.31 Aligned_cols=194 Identities=18% Similarity=0.280 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEc
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~ 221 (434)
.+.++++.+.++... ...+ ..-..+|.+.+++++ ...+++.+++++.|+.+++.++-.++||+|++|
T Consensus 5 ~e~~~~v~~~l~s~~---~~~~--g~~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p 71 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGW---LSTY--GPYVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVP 71 (363)
T ss_dssp HHHHHHHHHHHHHTC---CSSS--SHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEE
T ss_pred HHHHHHHHHHHHhCC---ccCC--CHHHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecC
Confidence 345666777777641 2222 233688999999998 356899999999999999999854689999999
Q ss_pred CCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC-CCCCccCCCHHHHHHHHHHHH
Q 013892 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 222 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p-~NPtG~~~~~~~l~~i~~~~~ 300 (434)
.-+|......+...|++++.++++++ ++.+|++.+++++++ ++++|++.|. ++|. ++++|.++|+
T Consensus 72 ~~t~~~~~~ai~~~G~~pv~~Di~~~-~~~id~~~~~~~i~~------~t~ai~~~h~~G~~~-------d~~~i~~~~~ 137 (363)
T PF01041_consen 72 AYTFPATASAILWAGAEPVFVDIDPE-TLNIDPEALEKAITP------KTKAILVVHLFGNPA-------DMDAIRAIAR 137 (363)
T ss_dssp SSS-THHHHHHHHTT-EEEEE-BETT-TSSB-HHHHHHHHHT------TEEEEEEE-GGGB----------HHHHHHHHH
T ss_pred CCcchHHHHHHHHhccEEEEEeccCC-cCCcCHHHHHHHhcc------CccEEEEecCCCCcc-------cHHHHHHHHH
Confidence 99999999999999999999999865 689999999999998 8999999875 4443 4999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecC--CCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 301 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~--SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
++|++||+|.++.....-...+ .+ .+.+ +.+.|| +|.+. .--+|.++. .++++.+++..
T Consensus 138 ~~~i~lIeD~a~a~g~~~~g~~----------~G-~~gd---~~~fSf~~~K~i~---~geGG~v~~--~~~~~~~~~~~ 198 (363)
T PF01041_consen 138 KHGIPLIEDAAQAFGARYKGRP----------VG-SFGD---IAIFSFHPTKIIT---TGEGGAVVT--NDPELAERARA 198 (363)
T ss_dssp HTT-EEEEE-TTTTT-EETTEE----------TT-SSSS---EEEEESSTTSSS----SSS-EEEEE--STHHHHHHHHH
T ss_pred HcCCcEEEccccccCceeCCEe----------cc-CCCC---ceEecCCCCCCCc---CCCCeeEEe--cHHHHHHHhhh
Confidence 9999999999998644322211 11 1234 566676 68773 344788764 48888888887
Q ss_pred Hhh
Q 013892 379 VAS 381 (434)
Q Consensus 379 ~~~ 381 (434)
++.
T Consensus 199 ~~~ 201 (363)
T PF01041_consen 199 LRN 201 (363)
T ss_dssp HTB
T ss_pred hhc
Confidence 653
No 245
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.67 E-value=5.9e-15 Score=149.95 Aligned_cols=260 Identities=17% Similarity=0.122 Sum_probs=171.7
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-++.+++++.+.++.. ...|.+..+..+|.+.+++.+ . ..+.+++++++++
T Consensus 49 G~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~----~~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGse 117 (426)
T PRK00062 49 GNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG----LSFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTE 117 (426)
T ss_pred CCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC----CcCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHH
Confidence 4456666554 1246788999999998873 233455555666777776654 1 3568999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHc-C------------CeEE-----EEecCCCCCCCCCHHHHHHHHH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH-G------------GTLV-----PYYLDEATGWGLETSEVKKQLE 262 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~-g------------~~~~-----~~~~~~~~~~~~d~~~l~~~l~ 262 (434)
|+..+++.... ..+++|+..+++|.++...+... | .... .+... ..|++.+++.++
T Consensus 118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~ 192 (426)
T PRK00062 118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFE 192 (426)
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHH
Confidence 99999988542 23689999999999986443322 1 0000 01111 137888988886
Q ss_pred HHHhcCCCeeEEEEe-cCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCc
Q 013892 263 AAKAKGITVRALVVI-NPGNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDI 340 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~-~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 340 (434)
.. +.++.+|++. -++| +|.+.+ .+.+++|.++|++||+++|+||+|.++.++. .... . .++ ..+|
T Consensus 193 ~~---~~~~aaiivEpv~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~---~~~~-~---~~~-~~pD- 259 (426)
T PRK00062 193 EY---GDEIAAVIVEPVAGN-MGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL---GGAQ-G---YYG-VTPD- 259 (426)
T ss_pred hC---CCcEEEEEEeCCcCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC---ccHH-H---HhC-CCcc-
Confidence 42 1256677766 4455 888876 7889999999999999999999999873332 1111 1 111 1255
Q ss_pred eEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH---hh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 341 SLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV---AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 341 ~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~---~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
+.+|||.+ | .|+++|++++ ++++++.+... .. .+.+.+++.++++...|+..+. ++.+++.++.-+
T Consensus 260 ----i~~~gK~l-~-~G~p~ga~~~---~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~~~~~~~~~~~~ 329 (426)
T PRK00062 260 ----LTTLGKII-G-GGLPVGAFGG---RREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE-PGFYEELEALTK 329 (426)
T ss_pred ----hHhhhhHh-h-CCCcceeeeE---HHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc-chHHHHHHHHHH
Confidence 34889999 5 6999999977 88898888532 11 3457888888888777753211 145555566666
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|++.
T Consensus 330 ~~~~~l~~~ 338 (426)
T PRK00062 330 RLAEGLKEA 338 (426)
T ss_pred HHHHHHHHH
Confidence 666666654
No 246
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=2.6e-14 Score=144.93 Aligned_cols=275 Identities=17% Similarity=0.121 Sum_probs=173.5
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|++.+++.+.+.+.. ...+... ..+....+++.+..... ....+.+++++++++
T Consensus 39 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~---~~~~~~~--~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGse 112 (421)
T PRK06777 39 GREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFT---HTAYQIV--PYASYVTLAERINALAP-IDGPAKTAFFTTGAE 112 (421)
T ss_pred CCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcc---ccccccc--CChHHHHHHHHHHHhCC-CCCCceEEEeCCcHH
Confidence 3445665444 23447789999999888642 1112110 11223344444433221 012468999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHc-CCe-------------EEEEecCCCCCCC----CCHHHHHHHHH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GGT-------------LVPYYLDEATGWG----LETSEVKKQLE 262 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~~~~~----~d~~~l~~~l~ 262 (434)
|+..+++.... ....+|+...-+|.+........ |.. +..++.... .++ .+++.+++.++
T Consensus 113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~~~~ 191 (421)
T PRK06777 113 AVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNE-LHGVSVEEALSSVERLFK 191 (421)
T ss_pred HHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc-ccCcCHHHHHHHHHHHHH
Confidence 99999887642 23467888888888765543322 211 011111110 011 12556666664
Q ss_pred HHHhcCCCeeEEEEecCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCce
Q 013892 263 AAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 341 (434)
... .+.++.+|++.-.++..|. +++.+.+++|.++|++||+++|+||+|.++.+.+. +.++. .++ ..+|
T Consensus 192 ~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~--~~~~~----~~~-~~pD-- 261 (421)
T PRK06777 192 ADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGK--LFAME----YYD-VKPD-- 261 (421)
T ss_pred hcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCc--hhhhh----hcC-CCCC--
Confidence 311 1124656665544777886 67899999999999999999999999999766543 22221 111 2356
Q ss_pred EEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHH
Q 013892 342 LVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILS 420 (434)
Q Consensus 342 ~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 420 (434)
++ +|||.+ | .|+|+||+++ ++++++.+..... .+.+.+++.+.++...|+..+. ++.+++.+++.+.+.+
T Consensus 262 iv---~~sK~l-~-~G~pigav~~---~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~~l~~~~~~~g~~l~~ 332 (421)
T PRK06777 262 LI---TMAKSL-G-GGMPISAVVG---RAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE-EKLCQRALILGAHLVE 332 (421)
T ss_pred EE---eeehhh-c-CCCceEEEEE---cHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHH
Confidence 23 799999 5 7999999987 8888888764433 5567899999999888864222 4678888899999999
Q ss_pred HHHHHHH
Q 013892 421 SLARRAK 427 (434)
Q Consensus 421 ~L~~~~~ 427 (434)
.|++...
T Consensus 333 ~L~~l~~ 339 (421)
T PRK06777 333 VLEKAKA 339 (421)
T ss_pred HHHHHHH
Confidence 9988754
No 247
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.65 E-value=8.7e-15 Score=142.59 Aligned_cols=192 Identities=19% Similarity=0.276 Sum_probs=151.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCCC---CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC
Q 013892 139 LFSADSIERAWQILDQIPGRAT---GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~---~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g 215 (434)
+.|+.|++++.+.+.+...+.. ..|....+.++.|+.+|+++ +.++.+|++|+|+|+++.++++.+.+..+
T Consensus 54 p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiFts~ATEs~Nlvl~~v~~~~~ 127 (428)
T KOG1549|consen 54 PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVFTSGATESNNLVLKGVARFFG 127 (428)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEEeCCchHHHHHHHHHhhcccc
Confidence 3688899999887776432211 33444556889999999999 46788899999999999999999876566
Q ss_pred C----EEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCC
Q 013892 216 D----GILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (434)
Q Consensus 216 d----~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~ 288 (434)
| .|++..-.|++.... ++..|++++.+|... +...|++.+++.|++ +++++.+.+.+|-+|+++|
T Consensus 128 ~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~--~~~~d~~~~~~~i~~------~T~lv~I~~Vnn~~gv~~P 199 (428)
T KOG1549|consen 128 DKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVED--SGLVDISKLREAIRS------KTRLVSIMHVNNEIGVLQP 199 (428)
T ss_pred ccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCc--cccccHHHHHHhcCC------CceEEEEEecccCcccccc
Confidence 6 899998888876554 455699999999883 347899999999998 8999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 289 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+++|+++|+++|+.+++|.+++- +.- .... .+|+ .| ++.-|..|.| |.+| +|++.+
T Consensus 200 ---v~EI~~icr~~~v~v~~DaAQav---G~i--~vDV----~eln---~D---~~s~s~HK~y-gp~~--iGaLYv 255 (428)
T KOG1549|consen 200 ---VKEIVKICREEGVQVHVDAAQAV---GKI--PVDV----QELN---AD---FLSISAHKIY-GPPG--IGALYV 255 (428)
T ss_pred ---HHHHHHHhCcCCcEEEeehhhhc---CCc--cccH----HHcC---ch---heeeeccccc-CCCc--ceEEEE
Confidence 99999999999999999999884 211 1222 2333 34 5566889988 8888 888876
No 248
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.64 E-value=6.1e-14 Score=142.17 Aligned_cols=261 Identities=14% Similarity=0.101 Sum_probs=158.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC-CCCE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-ENDG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~-~gd~ 217 (434)
.-+|.+.+++.+++.... ...+.. ...+....+|+.+.+... ....+.+++++++++|+..+++....- ...+
T Consensus 56 h~~p~v~~ai~~ql~~~~---~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ 129 (421)
T PRK09792 56 HRHPDLVAAVEQQLQQFT---HTAYQI--VPYESYVTLAEKINALAP-VSGQAKTAFFTTGAEAVENAVKIARAHTGRPG 129 (421)
T ss_pred CCCHHHHHHHHHHHHhcc---CcccCc--cCCHHHHHHHHHHHHhCC-CCCCceEEEeCChHHHHHHHHHHHHHhcCCCe
Confidence 457889999999887642 111111 112333444554444322 112357899999999999998876422 3367
Q ss_pred EEEcCCCChhHHHHHHHc-CC-------------eEEEEecCCCCCCCC----CHHHHHHHHHHHHhcCCCeeEEEEecC
Q 013892 218 ILCPIPQYPLYSASIALH-GG-------------TLVPYYLDEATGWGL----ETSEVKKQLEAAKAKGITVRALVVINP 279 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~----d~~~l~~~l~~~~~~g~~~~~i~l~~p 279 (434)
|+....+|.+........ |. .+..++...+. .++ +++.+++.++... ...++.+|++.-.
T Consensus 130 ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPv 207 (421)
T PRK09792 130 VIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSDI-EAKQVAAIIFEPV 207 (421)
T ss_pred EEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhcc-CCCceEEEEEccc
Confidence 888888888764432221 21 01222221110 022 2366666665310 1125777777655
Q ss_pred CCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCc
Q 013892 280 GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (434)
Q Consensus 280 ~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~ 358 (434)
++|+|..+ +.+.+++|.++|++||+++|+||+|.++.+.+. +..+. .++ ..+| +.+|||++ | +|+
T Consensus 208 q~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~--~~a~~----~~~-~~pD-----i~t~gK~l-~-~G~ 273 (421)
T PRK09792 208 QGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGK--LFAMD----HYA-DKPD-----LMTMAKSL-A-GGM 273 (421)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc--hhHHH----hcC-CCCc-----EEEeehhh-c-CCC
Confidence 99999876 899999999999999999999999999766543 22222 121 2255 46899999 4 799
Q ss_pred eeEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 359 RGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 359 R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
|+||+++ ++++++.+.... ..+...+++++.++...++--+. .+..++.++..+.+.+.|++.
T Consensus 274 pigav~~---~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~-~~~~~~~~~~g~~l~~~l~~l 337 (421)
T PRK09792 274 PLSGVVG---NANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK-ESLCERANQLGQRLKNTLIDA 337 (421)
T ss_pred ceEEEEE---cHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH
Confidence 9999987 889888775332 24557888888865555432111 133444444444555555544
No 249
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.63 E-value=3.8e-14 Score=137.90 Aligned_cols=210 Identities=18% Similarity=0.196 Sum_probs=159.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH----HcCCeEEEEecC
Q 013892 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LHGGTLVPYYLD 245 (434)
Q Consensus 170 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~~~~~ 245 (434)
..+.+.+++.. | ..+.++++.+..|+..++..|+ +.|+.|+.....|......++ .+|++...+.++
T Consensus 80 ~~le~~iaal~----g----a~~~l~fsSGmaA~~~al~~L~-~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~ 150 (409)
T KOG0053|consen 80 DVLESGIAALE----G----AAHALLFSSGMAAITVALLHLL-PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD 150 (409)
T ss_pred HHHHHHHHHHh----C----CceEEEecccHHHHHHHHHHhc-CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh
Confidence 34555555543 3 4458888888899999999998 799999999999998766554 467887777654
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccc
Q 013892 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHS 325 (434)
Q Consensus 246 ~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s 325 (434)
|++.+++++++ ++++|++..|.||+..+.+ +++|+++|+++|++|++|+.+...++.+.-
T Consensus 151 -------~~~~~~~~i~~------~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~~pL---- 210 (409)
T KOG0053|consen 151 -------DLKKILKAIKE------NTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQDPL---- 210 (409)
T ss_pred -------hHHHHHHhhcc------CceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCcccccChh----
Confidence 57888888877 7999999999999999988 999999999999999999999886444321
Q ss_pred hHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCC
Q 013892 326 FKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVG 404 (434)
Q Consensus 326 ~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~ 404 (434)
.++ -| |+++|.+|.|+|...+-+|.++. ..+++...+...+. ...+++++..+... ++-+.+
T Consensus 211 ------~lG---AD---IV~hSaTKyi~Ghsdvi~G~iv~--n~~~~~~~l~~~~~~lg~~~~p~~~~ll~---Rglktl 273 (409)
T KOG0053|consen 211 ------PLG---AD---IVVHSATKYIGGHSDVIGGSVVL--NSEELASRLKFLQEDLGWCEDPFDLFLLS---RGLKTL 273 (409)
T ss_pred ------hcC---CC---EEEEeeeeeecCCcceeeeEEec--CcHHHHHHHHHHHHHhcCCCCHHHHHHHh---cCcchh
Confidence 111 24 89999999999988888998875 25889999888876 66677777665444 443444
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 013892 405 DESYESYCAERDGILSSLARR 425 (434)
Q Consensus 405 ~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.-+.++..++...+.+.|+..
T Consensus 274 ~lRi~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 274 HLRINKHSENALKIALLLEAH 294 (409)
T ss_pred hhhHHHHHHHHHHHHHHhhhC
Confidence 445556666666666666654
No 250
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.63 E-value=6.2e-14 Score=137.99 Aligned_cols=212 Identities=17% Similarity=0.175 Sum_probs=158.7
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~~ 244 (434)
...|.+.++++- ..++.+.++++..||..++..++ ++||.|+++...|.+... .++..|.++.+++.
T Consensus 65 ~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll-~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~ 135 (396)
T COG0626 65 RDALEEALAELE--------GGEDAFAFSSGMAAISTALLALL-KAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP 135 (396)
T ss_pred HHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhc-CCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC
Confidence 456666666654 35678889999999999888888 799999999998886544 44557888887753
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
. +.+.+++++.+. ++++|++..|.|||-.+.+ +.+|+++|+++|+++|+|+.|...++..+
T Consensus 136 ~-------~~~~~~~~~~~~-----~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~P---- 196 (396)
T COG0626 136 G-------DDEALEAAIKEP-----NTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQRP---- 196 (396)
T ss_pred C-------ChHHHHHHhccc-----CceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccccCh----
Confidence 2 455666666531 7999999999999988888 99999999999999999999998666542
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh--cccCCchHHHHHHHHHcCCCC
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLCSNISGQILASLVMSPPK 402 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~ 402 (434)
+ .++ -| |+++|.+|.++|....-+|.++ +.++++.+.+..... .....++...++ +++.-+
T Consensus 197 ----L--~~G---aD---IVvhSaTKyl~GHsDvl~G~v~--~~~~~~~~~~~~~~~~~~G~~l~p~dA~l---~lRGlk 259 (396)
T COG0626 197 ----L--ELG---AD---IVVHSATKYLGGHSDVLGGVVL--TPNEELYELLFFAQRANTGAVLSPFDAWL---LLRGLR 259 (396)
T ss_pred ----h--hcC---CC---EEEEeccccccCCcceeeeEEe--cChHHHHHHHHHHHHhhcCCCCCHHHHHH---HHhccc
Confidence 1 111 23 9999999999887778888554 336667777643333 444555665544 444556
Q ss_pred CChHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+.-+.++..++...+.+.|+++
T Consensus 260 TL~~Rm~~~~~nA~~IA~~L~~~ 282 (396)
T COG0626 260 TLALRMERHNENALKIAEFLADH 282 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcC
Confidence 66778889999999999998874
No 251
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.62 E-value=7.6e-14 Score=139.05 Aligned_cols=209 Identities=13% Similarity=0.130 Sum_probs=146.7
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~ 244 (434)
..+|.+.++++. | .+..+++++++.|+.+++.+++ ++||+|+++.+.|.. +...+...|++++.++.
T Consensus 66 ~~~lE~~la~le----g----~~~av~~sSG~aAi~~al~all-~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~ 136 (384)
T PRK06434 66 VQAFEEKYAVLE----N----AEHALSFSSGMGAITSAILSLI-KKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDT 136 (384)
T ss_pred HHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECC
Confidence 556777777765 3 3467788888899999999888 799999999876654 33566778999999988
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
++.+++.++. + ++++|++.+|.|||+.+.+ +++|.++|++++ +++|.++.......
T Consensus 137 ~~~~~~~l~~--------~------~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~~~~~----- 192 (384)
T PRK06434 137 DRLNSLDFDP--------S------NYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASPYNQN----- 192 (384)
T ss_pred CChhheeecC--------C------CeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCcccCC-----
Confidence 6543343321 1 6899999999999999877 999999999998 45699975422211
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCC
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKV 403 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~ 403 (434)
++ ..+ -| ++++|.+|.++|..+.-+|.++. .++++.+.+...+. ...+.+.+..+ ..+..-+.
T Consensus 193 pl-----~~g---aD---ivv~S~tK~i~G~~d~~gG~vv~--~~~~~~~~~~~~~~~~G~~~~~~~A~---l~~~gL~t 256 (384)
T PRK06434 193 PL-----DLG---AD---VVIHSATKYISGHSDVVMGVAGT--NNKSIFNNLVERRKTLGSNPDPIQAY---LALRGLKT 256 (384)
T ss_pred ch-----hcC---CC---EEEeecccccCCCCCceEEEEec--CcHHHHHHHHHHHHhcCCCCCHHHHH---HHHhCCCc
Confidence 11 111 34 88999999996533366787653 36777777765543 33344544433 34444566
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHH
Q 013892 404 GDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 404 ~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++...++..++...+.+.|+.+.
T Consensus 257 L~~R~~r~~~~a~~~a~~L~~~p 279 (384)
T PRK06434 257 LGLRMEKHNKNGMELARFLRDSK 279 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 67888888888888888888764
No 252
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.62 E-value=9.2e-14 Score=140.55 Aligned_cols=217 Identities=15% Similarity=0.162 Sum_probs=138.7
Q ss_pred CChhHHHHHHhhcCC---CCccccccc-CCCCCHHHHHHHHHHHHcCCCCCCCC-CCCCcchHHHHHHHHHHHHhhcCCC
Q 013892 113 QPITFFREVLALCDH---PSILDRSET-QGLFSADSIERAWQILDQIPGRATGA-YSHSQGIKGLRDTIAAGIEARDGFP 187 (434)
Q Consensus 113 ~p~~~~r~v~~~~~~---p~~l~~~~~-~~~~p~~v~~~~~~~l~~~~~~~~~~-Y~~~~G~~~lr~~ia~~~~~~~g~~ 187 (434)
.++..+|+.+..... +..+.|+.+ ....|..+.+++.+.+.......... |....+...+.+++.+ + +..|
T Consensus 8 ~~~~~~r~~f~~~~~~~~~~~iyld~~a~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g-- 83 (406)
T TIGR01814 8 DPLRALRDEFHLPKIGDENAVIYLDGNSLGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVG-- 83 (406)
T ss_pred ChHHHHHHhcCCCcccCCCCcEEecCCCcCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccC--
Confidence 345555666654411 344555544 22457888888877765432111111 1101112222233222 2 2334
Q ss_pred CCCCCEEEcCChHHHHHHHHHHHhcCCC---CEEEEcCCCChhHHH----HHHHcCCeE----EEEecCCCCCCCCCHHH
Q 013892 188 ADPNDIFLTDGASPAVHMMMQLLIRSEN---DGILCPIPQYPLYSA----SIALHGGTL----VPYYLDEATGWGLETSE 256 (434)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~l~~l~~~~g---d~Vlv~~p~y~~~~~----~~~~~g~~~----~~~~~~~~~~~~~d~~~ 256 (434)
+++++|++|+|+++++..++..+. .++ +.|++....|+.... .++..|+++ +.++.+ .++.+|++.
T Consensus 84 ~~~~~v~~~~~~t~~l~~~~~~~~-~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~--~~g~~~~~~ 160 (406)
T TIGR01814 84 AKEDEVVVMNTLTINLHLLLASFY-KPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPR--EEETLRLED 160 (406)
T ss_pred CCCCcEEEeCCchHHHHHHHHHhc-CCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccC--CCCccCHHH
Confidence 578999999999999999998875 454 368888899987322 345668887 345443 234678999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++.++.. +.++++|++++++|.||.+++ +++|.++|+++|+++++|+++...... ..+ ..+
T Consensus 161 l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~~~-----id~----~~~--- 222 (406)
T TIGR01814 161 ILDTIEKN---GDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGNVP-----LDL----HDW--- 222 (406)
T ss_pred HHHHHHhc---CCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccccCCcc-----ccc----ccC---
Confidence 98888532 127999999999999999999 999999999999999999998753221 111 111
Q ss_pred CCCceEEEEecCCCCCCCCCC
Q 013892 337 EKDISLVSFQSVSKGYYGECG 357 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G 357 (434)
..| +++.|..|.+.|-||
T Consensus 223 gvD---~~~~s~hK~l~g~pG 240 (406)
T TIGR01814 223 GVD---FACWCTYKYLNAGPG 240 (406)
T ss_pred CCC---EEEEcCccccCCCCC
Confidence 134 778899998744355
No 253
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.62 E-value=1.1e-13 Score=140.48 Aligned_cols=264 Identities=13% Similarity=0.072 Sum_probs=156.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-CCCCE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-~~gd~ 217 (434)
.-++++++++.+.+.+.. ...+... ..+.+..+|+.+.+... ....+.+++++++++|+..+++.... ....+
T Consensus 49 h~~p~v~~a~~~ql~~~~---~~~~~~~--~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ 122 (420)
T TIGR00700 49 HSHPRVVDAVRTQVAEFT---HTCFMVT--PYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAEAVENAVKIARSYTGRPG 122 (420)
T ss_pred CCCHHHHHHHHHHHHhcc---Ccccccc--CChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCc
Confidence 347789999999887642 1112111 11223344444443221 11235899999999999999887542 23467
Q ss_pred EEEcCCCChhHHHHHHHc-CC-------------eEEEEecCC--CC-------CCCCCHHHHHHHHHHHHhcCCCeeEE
Q 013892 218 ILCPIPQYPLYSASIALH-GG-------------TLVPYYLDE--AT-------GWGLETSEVKKQLEAAKAKGITVRAL 274 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~--~~-------~~~~d~~~l~~~l~~~~~~g~~~~~i 274 (434)
|+...-+|.+........ |. .+..++... .. .+.-+++.+++.+... ..+.++.+|
T Consensus 123 ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAav 201 (420)
T TIGR00700 123 VVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID-VGANNVAAL 201 (420)
T ss_pred EEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh-cCCCcEEEE
Confidence 888888888765433322 21 011122110 00 0001244556555311 112256566
Q ss_pred EEecCCCCCccCCCH-HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCC
Q 013892 275 VVINPGNPTGQVLAE-ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY 353 (434)
Q Consensus 275 ~l~~p~NPtG~~~~~-~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~ 353 (434)
++.-.+.-+|.+++. +.+++|.++|++||+++|+||+|.++.+.+. +.++. ..+ ..+| +.+|||++
T Consensus 202 i~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~--~~a~~----~~~-~~pD-----i~~lsK~l- 268 (420)
T TIGR00700 202 VIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGA--MFACE----HEG-PEPD-----LITTAKSL- 268 (420)
T ss_pred EECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccch--hHHHh----hcC-CCCC-----EEEeeccc-
Confidence 655335557886655 4599999999999999999999999766553 22221 111 2355 23589999
Q ss_pred CCCCceeEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 354 GECGKRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 354 g~~G~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+ +|+|+||+++ ++++++.+.... ..+.+.++++|+++...++--+. +...+...+..+.+.+.|++...
T Consensus 269 ~-~G~pig~v~~---~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~-~~~~~~~~~~g~~l~~~L~~l~~ 338 (420)
T TIGR00700 269 A-DGLPLSGVTG---RAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIES-EGLIERARQIGRLVTDRLTTLKA 338 (420)
T ss_pred c-CCcceEEEEe---cHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh
Confidence 5 7999999987 889988875432 35667889999888666642100 13455555555666666665543
No 254
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=2.4e-13 Score=137.81 Aligned_cols=272 Identities=14% Similarity=0.095 Sum_probs=162.8
Q ss_pred Cccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
..||+..+ -..-+|.+.+++.+.+..... ....+.+. +....+++.+.+....+ ..+.+++++++++|+
T Consensus 41 ~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~-~~~~~~~~----~~~~~la~~l~~~~p~~-~~~~v~f~~SGseA~ 114 (425)
T PRK07495 41 RYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTH-TCHQVVPY----ENYVRLAERLNALVPGD-FAKKTIFVTTGAEAV 114 (425)
T ss_pred EEEEccccHHhhccCCCCHHHHHHHHHHHhhccC-cccCccCC----HHHHHHHHHHHHhCCCC-CCCEEEECCchHHHH
Confidence 35565444 234578899999998876421 01112222 23334444444432200 125899999999999
Q ss_pred HHHHHHHhc-CCCCEEEEcCCCChhHHHHHHH-cCC-------------eEEEEecCCCCCCCCC----HHHHHHHHHHH
Q 013892 204 HMMMQLLIR-SENDGILCPIPQYPLYSASIAL-HGG-------------TLVPYYLDEATGWGLE----TSEVKKQLEAA 264 (434)
Q Consensus 204 ~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~~~~~~~~~~~~d----~~~l~~~l~~~ 264 (434)
..+++.... ....+|+...-+|.+....... .|. .++.++..... .+.+ ++.+++.++..
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~ 193 (425)
T PRK07495 115 ENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKAD 193 (425)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhc
Confidence 999887542 2346788888888876433222 111 12222222110 1223 33445554321
Q ss_pred HhcCCCeeEEEEe-cCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceE
Q 013892 265 KAKGITVRALVVI-NPGNPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342 (434)
Q Consensus 265 ~~~g~~~~~i~l~-~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~ 342 (434)
. .+.++.+|++. ..+| +| ..++.+.+++|.++|++||+++|+||+|.++...+. +..+. ..+ ..+|
T Consensus 194 ~-~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~--~~a~~----~~g-v~pD--- 261 (425)
T PRK07495 194 V-DPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGK--LFAME----HHE-VAAD--- 261 (425)
T ss_pred c-CCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCC--ceeec----ccC-CCCC---
Confidence 1 11256666666 3366 88 457899999999999999999999999998655443 21111 111 1234
Q ss_pred EEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHH
Q 013892 343 VSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSS 421 (434)
Q Consensus 343 i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~ 421 (434)
+.+|||.+ | .|+|+|++++ ++++++.+.... ..+.+.++++++++...++--+. ....++.++..+.+.+.
T Consensus 262 --i~tlsK~l-~-~G~pigav~~---~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~ 333 (425)
T PRK07495 262 --LTTMAKGL-A-GGFPLAAVTG---RAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE-EDLCERANQLGNRLKQR 333 (425)
T ss_pred --EEeehhhh-c-CCccceEEEE---cHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHH
Confidence 56889999 4 6999999987 888888775432 24557888888866665542111 24566667777777777
Q ss_pred HHHHHH
Q 013892 422 LARRAK 427 (434)
Q Consensus 422 L~~~~~ 427 (434)
|++...
T Consensus 334 L~~l~~ 339 (425)
T PRK07495 334 LASLRE 339 (425)
T ss_pred HHHHHh
Confidence 776544
No 255
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.60 E-value=2.6e-13 Score=138.86 Aligned_cols=274 Identities=13% Similarity=0.106 Sum_probs=161.2
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|.+.+++.+.++.........+ ..+....+|+.+.+.... ...+.+++++++++
T Consensus 53 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~-----~~~~~~~la~~L~~~~p~-~~~~~v~f~~sGse 126 (451)
T PRK06918 53 GNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVM-----MYEPYIELAEKLAALAPG-SFDKKVLFLNSGAE 126 (451)
T ss_pred CCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCcccccc-----ccHHHHHHHHHHHHhCCC-CCCCEEEEcCCcHH
Confidence 4446676554 234578899999998876421001111 123344555555443221 11158999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHc-CCe-------------EEEEecCC--CCCCCCC--------HHH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GGT-------------LVPYYLDE--ATGWGLE--------TSE 256 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~--~~~~~~d--------~~~ 256 (434)
|+..+++.... ....+|+....+|.+........ |.. +..+|... ....++. ++.
T Consensus 127 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (451)
T PRK06918 127 AVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEE 206 (451)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHH
Confidence 99999887542 23467888888888765543332 210 11111110 0001111 122
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCC-ccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPT-GQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPt-G~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~ 334 (434)
+++.+.... +.+.-+.+|..|-+.. |.++ +.+.+++|.++|++||+++|+||+|.++.+.+. +.++.. ++
T Consensus 207 ~~~~~~~~~--~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~--~~a~~~----~~ 278 (451)
T PRK06918 207 FKNFFISEV--APETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGK--YFAIEH----FD 278 (451)
T ss_pred HHHHHHhhc--CCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCc--eehhHh----cC
Confidence 333332111 1123455566674444 6645 455699999999999999999999999876553 333221 22
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 413 (434)
..+| +.||||++ + +|+|+||+++ ++++++.+..... .+.+.+++++.++...++--+. ....++.++
T Consensus 279 -v~pD-----i~t~sK~l-~-~G~pig~v~~---~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~-~~~~~~~~~ 346 (451)
T PRK06918 279 -VVPD-----LITVSKSL-G-AGVPISGVIG---RKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEK-ENLNDRAIE 346 (451)
T ss_pred -CCCC-----EEeeehhh-c-CCCccEEEEE---cHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHH-CCHHHHHHH
Confidence 2255 33899999 5 7999999987 8898888754333 5668899999987666642100 134455555
Q ss_pred HHHHHHHHHHHHH
Q 013892 414 ERDGILSSLARRA 426 (434)
Q Consensus 414 ~r~~l~~~L~~~~ 426 (434)
.++.+.+.|++..
T Consensus 347 ~g~~l~~~l~~l~ 359 (451)
T PRK06918 347 LGKVVMNRFEEMK 359 (451)
T ss_pred HHHHHHHHHHHHH
Confidence 6666666666553
No 256
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.60 E-value=1.4e-14 Score=143.74 Aligned_cols=243 Identities=18% Similarity=0.235 Sum_probs=149.3
Q ss_pred CCCCCCCcch-HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCe
Q 013892 160 TGAYSHSQGI-KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT 238 (434)
Q Consensus 160 ~~~Y~~~~G~-~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~ 238 (434)
......+.|. .+..+.+|+.+ | ..+..++++|+|.++..++.+++ .+||+|+++..+|-+....+...|++
T Consensus 58 lD~L~~p~G~I~eAe~~aA~~f----G---Ad~t~flvnGsT~g~~a~i~a~~-~~gd~VLv~RN~HkSv~~alil~ga~ 129 (417)
T PF01276_consen 58 LDDLHDPEGIIKEAEELAARAF----G---ADKTFFLVNGSTSGNQAMIMALC-RPGDKVLVDRNCHKSVYNALILSGAI 129 (417)
T ss_dssp CBBTTTTBTHHHHHHHHHHHHH----T---ESEEEEESSHHHHHHHHHHHHHT-TTTCEEEEETT--HHHHHHHHHHTEE
T ss_pred cCcccCCccHHHHHHHHHHHhc----C---CCeEEEEecCchHHHHHHHHHhc-CCCCEEEEcCCcHHHHHHHHHHcCCe
Confidence 3344444554 44555555554 4 23468899999999999999999 79999999999999999999999999
Q ss_pred EEEEecCCCCCCC----CCH-----HHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 013892 239 LVPYYLDEATGWG----LET-----SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (434)
Q Consensus 239 ~~~~~~~~~~~~~----~d~-----~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 309 (434)
+++++.. .+.++ ++. +.++++|++..... .+++++|++|+. -|++++ +++|+++|+++++.|++|
T Consensus 130 Pvyi~p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k-~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvD 203 (417)
T PF01276_consen 130 PVYIPPE-DNEYGIIGGISPDEFNEEDIEEALKEHPDAK-APRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVD 203 (417)
T ss_dssp EEEEEEE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCH-CESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE
T ss_pred EEEecCC-ccccCCccCCChhhhhHHHHHHHHHhCcccc-CceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEE
Confidence 9998876 44444 355 88999998743211 255699999988 899998 999999999999999999
Q ss_pred cCCCCCccCCCCCccchHHHHhhhCC-CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH-HHHHHHHHHhh--cccC
Q 013892 310 EVYQENVYVPEKKFHSFKKVSRSMGY-GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-EVREQIYKVAS--VNLC 385 (434)
Q Consensus 310 eay~~~~~~~~~~~~s~~~~~~~l~~-~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~-~~~~~l~~~~~--~~~~ 385 (434)
|||+.... |..+..-.-.++. ...+..+++++|..|++ +++.-+.++.+..+. --.+++..... .+.+
T Consensus 204 EAhGah~~-----F~~lp~~a~~~gad~~~~~~~~vvqS~HKtL---~altQts~lh~~~~~~v~~~~~~~~l~~~~TTS 275 (417)
T PF01276_consen 204 EAHGAHFG-----FHPLPRSALALGADRPNDPGIIVVQSTHKTL---PALTQTSMLHVKGDRIVDHERVNEALSMHQTTS 275 (417)
T ss_dssp -TT-TTGG-----CSGGGTTCSSTTSS-CTSBEEEEEEEHHHHS---SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS
T ss_pred cccccccc-----CCCCccchhhccCccccccceeeeechhhcc---cccccceEEEecCCCcccHHHHHHHHHHHcCCC
Confidence 99987422 1111111111111 12344689999999988 466666555444332 22344444333 2334
Q ss_pred CchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHH
Q 013892 386 SNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 386 ~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
|+-+..+.++.+... ...+++..++..++.+.+++.|++
T Consensus 276 PSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~ 316 (417)
T PF01276_consen 276 PSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINR 316 (417)
T ss_dssp --HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 444433333222211 122345556666666666666644
No 257
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=2.2e-13 Score=138.04 Aligned_cols=215 Identities=15% Similarity=0.145 Sum_probs=146.5
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~ 244 (434)
...+++.+++++ | ..+.|++++|. .++..++..++ .+||+|+++...|.... ..+...|++++.++
T Consensus 71 ~~~le~~la~l~----g---~~~~v~fsSG~-~Ai~~al~~ll-~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 71 VEALENRIASLE----G---GVHAVAFASGQ-AAETAAILNLA-GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred HHHHHHHHHHHh----C---CCeEEEeCCHH-HHHHHHHHHhc-CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 456677777765 3 13455555655 77777777777 79999999999998763 44577899999887
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
+. .|++.+++++++ ++++|++.++.||+|.+.+ +++|.++|+++|+++|+|.++.......
T Consensus 141 ~~-----~d~e~l~~~l~~------~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~~~----- 201 (437)
T PRK05613 141 NP-----DDPESWQAAVQP------NTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAALVR----- 201 (437)
T ss_pred CC-----CCHHHHHHhCCc------cCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccccC-----
Confidence 22 278999999887 7999999999999999988 9999999999999999999986522211
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC---------------------------------HH
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS---------------------------------AE 371 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~---------------------------------~~ 371 (434)
.. .++ -| ++++|++|.++| .|.-+|-+++.+.+ .+
T Consensus 202 p~-----~~G---aD---ivv~S~~K~l~G-~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (437)
T PRK05613 202 PL-----ELG---AD---VVVASLTKFYTG-NGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPA 269 (437)
T ss_pred hH-----HhC---CC---EEEeeccceecC-CCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHH
Confidence 11 122 24 889999998854 45433433332211 00
Q ss_pred HH-HHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 372 VR-EQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 372 ~~-~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+. +....... ...+.++...++ +++.-+.+..+.++..++...+.+.|+++.+
T Consensus 270 ~~~~~~~~~~~~~G~~~~p~~a~l---~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~ 324 (437)
T PRK05613 270 FGLKARAGLLRDTGATLSPFNAWV---TAQGLDTLSLRLERHNENAIKVAEFLNNHEK 324 (437)
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHH---HHcccCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 00 11111122 344555555544 4444466778888999999999999997754
No 258
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.59 E-value=2.4e-13 Score=135.44 Aligned_cols=198 Identities=19% Similarity=0.212 Sum_probs=145.3
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH-HHHHcCCeE
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA-SIALHGGTL 239 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~ 239 (434)
-.|..+..+.+|.+++++++ ..+.++.|++++.|+.++....+ +|||.| +.++|..... .++..|+.+
T Consensus 65 e~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al~ll~~l~l-~pGDeV--psn~~f~Tt~ahIe~~Gav~ 133 (450)
T TIGR02618 65 EAYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAENLLSQIAI-KPGDYV--PGNMYFTTTRYHQEKNGATF 133 (450)
T ss_pred hhhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHHHHHHHhCC-CCcCEE--CCceeHHHHHHHHHhCCeEE
Confidence 35888888999999999998 34579999999999998776666 799987 7788855444 478889877
Q ss_pred EEEecCC--------CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCC-CccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 013892 240 VPYYLDE--------ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP-TGQVLAEENQRAIVDFCKKEGLVLLADE 310 (434)
Q Consensus 240 ~~~~~~~--------~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NP-tG~~~~~~~l~~i~~~~~~~~~~li~De 310 (434)
+.++.++ ..++.+|++.|+++|++... .++++|.+++++|- .|.+++.+++++|.++|++||+.||.|.
T Consensus 134 vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~--~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~Da 211 (450)
T TIGR02618 134 VDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA--DKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDA 211 (450)
T ss_pred EeeecccccccccCCCCCCCcCHHHHHHHhccccC--cccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 7765442 33578899999999985211 14567888899885 4899999999999999999999999999
Q ss_pred CCCC-Ccc-----CCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce-eEEEEEecCCHHHHHHHHHHhh
Q 013892 311 VYQE-NVY-----VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSAEVREQIYKVAS 381 (434)
Q Consensus 311 ay~~-~~~-----~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R-~G~~~~~~~~~~~~~~l~~~~~ 381 (434)
+... ..+ .+.-.-.++..+.+++. .+-| .++.|..|.+ |.. +|+++ .+ +++++++++..+-
T Consensus 212 AR~~gNA~~I~~re~g~~~~~i~ei~~e~~-~~aD---~~~~S~~Kd~----~~~~GG~l~-~~-d~~l~~k~r~~~~ 279 (450)
T TIGR02618 212 TRCVENAYFIKEREQGYEDKSIAEILKEMM-SYAD---GCTMSGKKDC----LVNIGGFLC-MN-DDEMFQSAKELVV 279 (450)
T ss_pred cchhhChhhhhcccccccCCCHHHHHHHHh-ccCc---EEEEeeccCC----CCCCceEEE-eC-CHHHHHHHHHHhh
Confidence 8865 211 01101235555556655 2344 4788999987 344 45554 44 8999999887743
No 259
>PRK04311 selenocysteine synthase; Provisional
Probab=99.59 E-value=5.4e-13 Score=135.73 Aligned_cols=205 Identities=16% Similarity=0.190 Sum_probs=141.5
Q ss_pred cccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCC---cc--hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHH
Q 013892 134 SETQGLFSADSIERAWQILDQIPGRATGAYSHS---QG--IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQ 208 (434)
Q Consensus 134 ~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~---~G--~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~ 208 (434)
+.+...+|+++++++.+.+.... ...|... .| +..+++.+++++ | .++.+++++++.|+.+++.
T Consensus 92 Nlg~s~l~~~v~eav~~~~~~~~---~le~~l~~g~~g~r~~~~e~~lA~l~----G----ae~a~vv~sgtaAl~l~l~ 160 (464)
T PRK04311 92 NLGRALLSEAAIEAVTEAARGYS---NLEYDLATGKRGSRDRALAALLCALT----G----AEDALVVNNNAAAVLLALN 160 (464)
T ss_pred cCCCCCCCHHHHHHHHHHHhccc---ccccchhhcccchHHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHH
Confidence 33345678999999988876532 1122221 12 356777777776 3 3457778888899998887
Q ss_pred HHhcCCCCEEEEcCCCChh------HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCC
Q 013892 209 LLIRSENDGILCPIPQYPL------YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (434)
Q Consensus 209 ~l~~~~gd~Vlv~~p~y~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NP 282 (434)
.+ .+||+|+++...+.. +...++..|++++.+..+. ..++++++++|++ ++++|++.+++||
T Consensus 161 ~l--~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~------~TklV~~vh~sN~ 228 (464)
T PRK04311 161 AL--AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINE------NTALLLKVHTSNY 228 (464)
T ss_pred Hh--CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCc------cCeEEEEEcCCCc
Confidence 65 689999999864432 2345677899999987542 3478999999987 7999999999999
Q ss_pred C--c--cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc----cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCC
Q 013892 283 T--G--QVLAEENQRAIVDFCKKEGLVLLADEVYQENV----YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYG 354 (434)
Q Consensus 283 t--G--~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~----~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g 354 (434)
+ | ...+ +++|+++|++||+++|+|.+.+.+. |+-.. ...+.... .++ -| ++++|..|.++
T Consensus 229 ~i~G~~~~~d---l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~-~p~~~~~l-~~G---aD---iv~fSg~K~Lg- 296 (464)
T PRK04311 229 RIEGFTKEVS---LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPD-EPTVQELL-AAG---VD---LVTFSGDKLLG- 296 (464)
T ss_pred cccccCCcCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCCC-CCchhhHH-hcC---Cc---EEEecCccccc-
Confidence 3 4 3455 9999999999999999999644321 11000 11111211 111 23 88999999884
Q ss_pred CCCceeEEEEEecCCHHHHHHHHH
Q 013892 355 ECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 355 ~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
|-.+|++++ .+++++++.+
T Consensus 297 --Gp~~G~i~g---~~~li~~l~~ 315 (464)
T PRK04311 297 --GPQAGIIVG---KKELIARLKK 315 (464)
T ss_pred --CCceEEEEE---cHHHHHHHhh
Confidence 446899876 8888888764
No 260
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.57 E-value=8.3e-14 Score=135.26 Aligned_cols=249 Identities=16% Similarity=0.180 Sum_probs=170.0
Q ss_pred CCCHHHHHHHHHHHHcCCC--CCCCCCCC--CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH--hc
Q 013892 139 LFSADSIERAWQILDQIPG--RATGAYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL--IR 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~--~~~~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l--~~ 212 (434)
++.+.|++++...+..... .+.+.|+- ...+++.|+.||+.+ ++++++|++|+|+|++..+++... ..
T Consensus 12 p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~TEsnNlaI~g~~~a~ 85 (386)
T COG1104 12 PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGATESNNLAIKGAALAY 85 (386)
T ss_pred CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCCcHHHHHHHHhhHHhh
Confidence 4578899999888876521 12444432 234667888888887 467899999999999999998873 21
Q ss_pred ---CCCCEEEEcCCCChhHHHHHHHc---CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC
Q 013892 213 ---SENDGILCPIPQYPLYSASIALH---GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (434)
Q Consensus 213 ---~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~ 286 (434)
+.|..|+++.-.|+...+.++.+ |.++.+++++.++ .+|+++|+++|++ ++.+|.+...||-||++
T Consensus 86 ~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G--~v~~e~L~~al~~------~T~LVSim~aNnE~G~I 157 (386)
T COG1104 86 RNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNG--LVDLEQLEEALRP------DTILVSIMHANNETGTI 157 (386)
T ss_pred hcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCC--eEcHHHHHHhcCC------CceEEEEEecccCeeec
Confidence 24789999999999988888776 9999999998753 7899999999998 89999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 287 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
.| +++|.++|+++++++++|.+..- +.- ...+.. + ++. +..-|-.|.. |.-| +|.+.+
T Consensus 158 Qp---I~ei~~i~k~~~i~fHvDAvQa~---Gki--pi~~~~----~-----~vD-~ls~SaHK~~-GpkG--iGaLyv- 215 (386)
T COG1104 158 QP---IAEIGEICKERGILFHVDAVQAV---GKI--PIDLEE----L-----GVD-LLSFSAHKFG-GPKG--IGALYV- 215 (386)
T ss_pred cc---HHHHHHHHHHcCCeEEEehhhhc---Cce--eccccc----c-----Ccc-eEEeehhhcc-CCCc--eEEEEE-
Confidence 99 99999999999999999998763 321 111111 0 112 3344668855 7667 566653
Q ss_pred cCCHHHHHHH------HHHhhcccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 367 GFSAEVREQI------YKVASVNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 367 ~~~~~~~~~l------~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.....+.-.+ ...++.+.+.+ +-.....+++. .+.++....++.+-|+++.+.|.+.
T Consensus 216 ~~~~~~~p~i~GGgQE~g~RsGTenv~--~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~ 279 (386)
T COG1104 216 RPGVRLEPLIHGGGQERGLRSGTENVP--GIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEI 279 (386)
T ss_pred CCCCccCceeccCcCCCCCCCCCccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1111111111 11233333333 33333333322 1234456667777788888777764
No 261
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.57 E-value=7.5e-13 Score=134.95 Aligned_cols=274 Identities=13% Similarity=0.088 Sum_probs=162.8
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+||+..+ -..-+|.+.+++.++++.........| .. +....+++.+.+... -..+.+++++++++
T Consensus 42 G~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~-~~----~~~~~la~~L~~~~~--~~~~~v~f~~SGse 114 (433)
T PRK08117 42 GKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVI-YY----ESILKLAEELAEITP--GGLDCFFFSNSGAE 114 (433)
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccccc-CC----HHHHHHHHHHHHhCC--CCCCEEEEeCcHHH
Confidence 3345666554 224578899999998876432011112 22 233444444443321 13468999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHH-HcCC--e-----------EEEEecCCCC--CCC--------CCHHH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIA-LHGG--T-----------LVPYYLDEAT--GWG--------LETSE 256 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~-~~g~--~-----------~~~~~~~~~~--~~~--------~d~~~ 256 (434)
|+..+++.... ....+|+...-+|.+...... ..+. . +..+|..... .++ .+++.
T Consensus 115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (433)
T PRK08117 115 AIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRD 194 (433)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHH
Confidence 99999886431 234678888888876543322 2110 0 1122211100 001 14555
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+++.++.... +.++.+|++.-...-.|.+ .+.+.+++|.++|++||+++|+||+|.++...+. .... ..++
T Consensus 195 l~~~~~~~~~-~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~--~~~~----~~~g- 266 (433)
T PRK08117 195 LESLFKHQVT-PEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGE--WFAA----QTFG- 266 (433)
T ss_pred HHHHHHhccC-CCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcccc--chhH----hhcC-
Confidence 6666553111 1145555544335556765 4778999999999999999999999998555443 1111 1111
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 414 (434)
..+| +.+|||++ | .|+++|++++ ++++++.+..... .+.+.+++++.++...|+.-+. +..++..++.
T Consensus 267 v~pD-----i~t~sK~l-g-~G~pigav~~---~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~-~~l~~~~~~~ 335 (433)
T PRK08117 267 VVPD-----IMTIAKGI-A-SGLPLSAVVA---SKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKE-EKLLDNANEM 335 (433)
T ss_pred CCCC-----Eeehhhhc-c-CCCcceeEEE---cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 2244 35999999 5 7999999987 8888887754322 4456788888888887763211 2456666666
Q ss_pred HHHHHHHHHHHH
Q 013892 415 RDGILSSLARRA 426 (434)
Q Consensus 415 r~~l~~~L~~~~ 426 (434)
.+.+.+.|++..
T Consensus 336 g~~l~~~L~~l~ 347 (433)
T PRK08117 336 GAYALERLEVLK 347 (433)
T ss_pred HHHHHHHHHHHH
Confidence 677777776653
No 262
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=1.5e-12 Score=132.98 Aligned_cols=276 Identities=13% Similarity=0.084 Sum_probs=167.8
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-++++.+++.+++.+.. . +....+..+.+..+|+.+.+.... ...+.+++++++++
T Consensus 55 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~--~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGse 128 (443)
T PRK06058 55 GNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFT---H--TCFMVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGAE 128 (443)
T ss_pred CCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhcc---C--ccccccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcHH
Confidence 4456777554 33457889999999887632 1 111122345566667766554321 11247888888899
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHc-CC-------------eEEEEec--C--CCCCCCCCH-HHHHHHH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GG-------------TLVPYYL--D--EATGWGLET-SEVKKQL 261 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~~~~--~--~~~~~~~d~-~~l~~~l 261 (434)
|+..+++.... ...++|+....+|.++....... +. .+..++. . ...++..+. +.+++.+
T Consensus 129 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (443)
T PRK06058 129 AVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAI 208 (443)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHH
Confidence 99999885431 23478999999999876543322 11 0111111 1 000001111 2222222
Q ss_pred HHHHh--cCCCeeEEEEecCCCCCc-cC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCC
Q 013892 262 EAAKA--KGITVRALVVINPGNPTG-QV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (434)
Q Consensus 262 ~~~~~--~g~~~~~i~l~~p~NPtG-~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~ 337 (434)
+..++ .+.++.+| +..|-+..| .+ .+++.+++|.++|++||+++|+||++.++...+. +... ... ...
T Consensus 209 ~~l~~~~~~~~iAav-i~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~--~fa~----~~~-gv~ 280 (443)
T PRK06058 209 TVIEKQVGADNLAAV-IIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGA--WFAC----EHE-GIV 280 (443)
T ss_pred HHHHHhhCCCceEEE-EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChh--hhHH----Hhc-CCC
Confidence 21111 11245454 466755554 43 4578999999999999999999999999654443 2111 111 133
Q ss_pred CCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 338 ~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
|| ++ +++|++ | .|+++|++++ ++++++.+.... ..+.+.++++++++...|+.-+. ++..++..+..+
T Consensus 281 PD--iv---~~gK~l-~-~G~Pi~av~~---~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~-~~l~~~~~~~g~ 349 (443)
T PRK06058 281 PD--LI---TTAKGI-A-GGLPLSAVTG---RAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEE-DDLVARARQIEA 349 (443)
T ss_pred CC--EE---EEcccc-c-CCCccEEEEE---cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH-cCHHHHHHHHHH
Confidence 67 33 458999 4 6999999987 888888875442 25667899999988888754211 256777788888
Q ss_pred HHHHHHHHHHH
Q 013892 417 GILSSLARRAK 427 (434)
Q Consensus 417 ~l~~~L~~~~~ 427 (434)
.+.+.|++...
T Consensus 350 ~l~~~L~~l~~ 360 (443)
T PRK06058 350 LMTDRLRALAA 360 (443)
T ss_pred HHHHHHHHHHh
Confidence 88888887654
No 263
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.54 E-value=1e-13 Score=132.83 Aligned_cols=207 Identities=17% Similarity=0.208 Sum_probs=141.1
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
.+++++++.+... +...|+...-..++.+.+++.+ | .+..+++++++.+..++++.++ .|++.|++
T Consensus 8 ~~~m~~a~~~a~~-----gd~~Yg~D~~~~~l~~~i~~l~----g----~e~a~f~~sGT~An~~al~~~~-~~~~~vi~ 73 (290)
T PF01212_consen 8 TPAMLEAMAAANV-----GDDAYGEDPTTARLEERIAELF----G----KEAALFVPSGTMANQLALRAHL-RPGESVIC 73 (290)
T ss_dssp -HHEEHHHHHTTS-----B-CCTTSSHHHHHHHHHHHHHH----T----SSEEEEESSHHHHHHHHHHHHH-HTTEEEEE
T ss_pred CHHHHHHHHcccc-----CCcccCCChhHHHHHHHHHHHc----C----CCEEEEeCCCChHHHHHHHHHH-hcCCceec
Confidence 4556666533221 1336888887888999999887 3 4566788899999999999999 69999999
Q ss_pred cCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC-ccCCCHHHHHHHH
Q 013892 221 PIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQRAIV 296 (434)
Q Consensus 221 ~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt-G~~~~~~~l~~i~ 296 (434)
..++|..... .....|+++++++.++.+ .+++++|++.++....-..++++|+|.+|+|-. |.+++.+++++|.
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G--~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~ 151 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGAKLIPLPSDDDG--KLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAIS 151 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTCEEEEEBECTGT--BB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred cccceeeeeccchhhHhcCcEEEECCCcccC--CCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence 9998764322 235589999999877622 789999999998853322378999999999953 8999999999999
Q ss_pred HHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHH
Q 013892 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (434)
Q Consensus 297 ~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 376 (434)
++|+++|+.++.|.+--...- ......+.++. .+-| ++.-|++|++ | ..+|-+++ .++++++..
T Consensus 152 ~~a~~~gl~lhmDGARl~~a~------~~~~~~~~e~~-~~~D---~v~~~~tK~~-g---~~~Gavl~--~~~~~i~~~ 215 (290)
T PF01212_consen 152 ELAREHGLPLHMDGARLANAA------AALGVSLAEIA-AGAD---SVSFGGTKNG-G---APGGAVLA--GNKEFIAKA 215 (290)
T ss_dssp HHHHHHT-EEEEEETTHHHHH------CHHHHHHHHHH-TTSS---EEEEETTSTT-----SSSEEEEE--ESHHHHHHH
T ss_pred HHHHhCceEEEEehhhHHHhh------hcccccHHHHh-hhCC---EEEEEEEccc-c---cccceEEE--echHHHHHH
Confidence 999999999999998543111 11112223332 1234 4455899987 4 43455543 278866655
Q ss_pred HHH
Q 013892 377 YKV 379 (434)
Q Consensus 377 ~~~ 379 (434)
..+
T Consensus 216 ~~~ 218 (290)
T PF01212_consen 216 RRQ 218 (290)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 264
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.54 E-value=2.8e-12 Score=130.88 Aligned_cols=275 Identities=14% Similarity=0.064 Sum_probs=162.9
Q ss_pred Cccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCC-EEEcCChHHH
Q 013892 129 SILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND-IFLTDGASPA 202 (434)
Q Consensus 129 ~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~-i~~t~G~~~a 202 (434)
..||+..+ -..-+|++++++.+++..... ....|.. .+.+..+|+.+.+.......... +++++++++|
T Consensus 40 ~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~-~~~~~~~----~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA 114 (442)
T TIGR00709 40 EYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLP-LHTLDLT----TPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADA 114 (442)
T ss_pred EEEEccccHhhhcCCCCCHHHHHHHHHHHHhccC-ccccccC----cHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHH
Confidence 35555444 234578899999988876321 0111122 23445555655544321101124 4556889999
Q ss_pred HHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHc-CC------------eEEEEecCCC--CCCC----CCHHH----HH
Q 013892 203 VHMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GG------------TLVPYYLDEA--TGWG----LETSE----VK 258 (434)
Q Consensus 203 l~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~--~~~~----~d~~~----l~ 258 (434)
+..+++.... ....+|+...-+|.+........ |. .+..++.... ..|+ .+.+. ++
T Consensus 115 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (442)
T TIGR00709 115 VEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194 (442)
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 9999887642 23467998888888766544332 20 1122222110 0011 01222 23
Q ss_pred HHHHHHHhcCCCeeEEEEecC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCC
Q 013892 259 KQLEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (434)
Q Consensus 259 ~~l~~~~~~g~~~~~i~l~~p-~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~ 337 (434)
+.++.......++.+|++... +|+....++++.+++|.++|++||+++|.||+|.++.+.+. +..+.. ++ ..
T Consensus 195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~a~~~----~g-v~ 267 (442)
T TIGR00709 195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGT--MFAFEH----AG-IE 267 (442)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc--hhHHHH----cC-CC
Confidence 333221111125667776644 55544568999999999999999999999999999765543 333221 21 33
Q ss_pred CCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH-HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK-VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 338 ~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
|| +++ +||++ |. |+++|++++ +++ ++.+.. ....+.+.++++++++...|+.-+. +...+..++..+
T Consensus 268 PD--iv~---~gK~l-~~-G~Pigav~~---~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~-~~l~~~~~~~g~ 335 (442)
T TIGR00709 268 PD--FVV---MSKAV-GG-GLPLAVLLI---APE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKD-DNLAQNAQERGE 335 (442)
T ss_pred Cc--EEE---Ecccc-cC-CcccEEEEE---chH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHH
Confidence 67 232 79999 53 999999987 666 444422 2235567899999988888854211 256778888888
Q ss_pred HHHHHHHHHHH
Q 013892 417 GILSSLARRAK 427 (434)
Q Consensus 417 ~l~~~L~~~~~ 427 (434)
.+.+.|+++..
T Consensus 336 ~l~~~L~~l~~ 346 (442)
T TIGR00709 336 RITSFLDDMIK 346 (442)
T ss_pred HHHHHHHHHHH
Confidence 88888887653
No 265
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.54 E-value=1.6e-13 Score=125.94 Aligned_cols=220 Identities=15% Similarity=0.188 Sum_probs=160.8
Q ss_pred CCCccccccc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 127 HPSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 127 ~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
...+|+|+.| +..-.|+++++..+++.+.+. +..+-.-..|...+.+.+...+.+.++ .|+.++.+.+-+|.
T Consensus 66 ~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGa-GlssvrfIcGtq~iHk~LE~kiAqfh~----rED~ilypscfdAN 140 (417)
T KOG1359|consen 66 DKKILNFCANNYLGLSSHPEIINAGQKALEEYGA-GLSSVRFICGTQDIHKLLESKIAQFHG----REDTILYPSCFDAN 140 (417)
T ss_pred ccceeeecccccccccCChHHHHHHHHHHHHhCC-CccceeEEecchHHHHHHHHHHHHHhC----CCceEEeccccccc
Confidence 4557888888 566789999999999998754 344444456777777777777766655 45566666666777
Q ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC
Q 013892 204 HMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (434)
Q Consensus 204 ~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt 283 (434)
.-++.+++ .|.|.|+-.+..|....+.++++. .|. .+|+-.++..+.++.+. +-|+|+....-...
T Consensus 141 ag~feail-~pedAvfSDeLNhASIIdGirLck----ry~-------h~dv~~l~~~l~~a~k~--r~klv~TDg~FSMD 206 (417)
T KOG1359|consen 141 AGAFEAIL-TPEDAVFSDELNHASIIDGIRLCK----RYR-------HVDVFDLEHCLISACKM--RLKLVVTDGVFSMD 206 (417)
T ss_pred hHHHHHhc-ChhhhhhccccccchhhhhhHHHh----hhc-------cchhHHHHHHHHHhhhh--eEEEEEecceeccC
Confidence 78888887 799999999999999988888765 111 45777777766654222 56666655556667
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEE
Q 013892 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM 363 (434)
Q Consensus 284 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~ 363 (434)
|-+.| +++|.+++++||.++++||+|..+.++..+. .....++ ...++ .|+..+++|.+ | |.-+||.
T Consensus 207 GdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGr-----Gt~E~~~-vm~~v-diinsTLgKAl-G--ga~GGyt 273 (417)
T KOG1359|consen 207 GDIAP---LEEISQLAKKYGALLFIDECHATGFFGETGR-----GTAEEFG-VMGDV-DIINSTLGKAL-G--GASGGYT 273 (417)
T ss_pred CCccc---HHHHHHHHHhcCcEEEEeecccceeecCCCC-----ChHHHhC-CCCcc-eehhhhhhhhh-c--CCCCCCc
Confidence 88877 8999999999999999999999999886542 1112222 11233 37789999998 4 7889999
Q ss_pred EEecCCHHHHHHHHHHhh
Q 013892 364 EVTGFSAEVREQIYKVAS 381 (434)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~ 381 (434)
.+ ++.+++.++....
T Consensus 274 tg---p~~li~llrqr~R 288 (417)
T KOG1359|consen 274 TG---PKPLISLLRQRSR 288 (417)
T ss_pred cC---ChhHHHHHHhcCC
Confidence 66 9999988876544
No 266
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.54 E-value=1.3e-12 Score=132.32 Aligned_cols=249 Identities=13% Similarity=0.069 Sum_probs=147.5
Q ss_pred CCHHHHHHHHHHH-HcCCCC--CCCCCCCCcchHHHHH----HHHHHHHhhcCCCCCCCCE-EEcCChHHHHHHHHHHHh
Q 013892 140 FSADSIERAWQIL-DQIPGR--ATGAYSHSQGIKGLRD----TIAAGIEARDGFPADPNDI-FLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 140 ~p~~v~~~~~~~l-~~~~~~--~~~~Y~~~~G~~~lr~----~ia~~~~~~~g~~~~~~~i-~~t~G~~~al~~~l~~l~ 211 (434)
++|.+++++...+ ...+.. +..-|+-..-..+|.+ .+++++ | .+.. +.+++++.|+..++.+++
T Consensus 40 ~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~----g----~~~alv~~~SG~~A~~~~l~al~ 111 (416)
T PRK13034 40 TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLF----G----CDYANVQPHSGSQANGAVYLALL 111 (416)
T ss_pred CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHh----C----CCceEEecCCcHHHHHHHHHHhc
Confidence 4788998887775 443210 0111111122445555 555554 4 2345 456778899999999998
Q ss_pred cCCCCEEEEcCCCChhH-HHHHHH--cCCeE--EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC
Q 013892 212 RSENDGILCPIPQYPLY-SASIAL--HGGTL--VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (434)
Q Consensus 212 ~~~gd~Vlv~~p~y~~~-~~~~~~--~g~~~--~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~ 286 (434)
++||+|+++..+|... ...++. .+... +.+..+.. ++.+|++++++.++.. ++++|++..+. +|..
T Consensus 112 -~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~-----~~klVi~~~~~--~g~~ 182 (416)
T PRK13034 112 -KPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEH-----KPKLIIAGFSA--YPRE 182 (416)
T ss_pred -CCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhc-----CCeEEEECCCc--cccc
Confidence 7999999999998762 222221 12222 23444332 4578999999988653 57888776654 3555
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 287 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
.+ +.+|.++|+++|+++|+|+++.-.++....... .+ .++ -++++|++|.+. |-.+|+++.
T Consensus 183 ~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~-------~~----~~~-Di~~~s~~K~l~---g~~GG~v~~- 243 (416)
T PRK13034 183 LD---FARFREIADEVGALLMVDMAHIAGLVAAGEHPN-------PF----PHA-HVVTTTTHKTLR---GPRGGMILT- 243 (416)
T ss_pred cC---HHHHHHHHHHcCCEEEEeCcccccCcccCCCCC-------CC----CCc-eEEEEeCcccCC---CCCCeEEEE-
Confidence 55 888888999999999999998876554321110 11 111 278999999883 455788764
Q ss_pred cCCHHHHHHHHHHhhcc--cCCchHHHHHHH-HHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 367 GFSAEVREQIYKVASVN--LCSNISGQILAS-LVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 367 ~~~~~~~~~l~~~~~~~--~~~~~~~q~~~~-~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.++++.+.+....... ..+......++. .++... ....+.+++..++.+++++.|++.
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~ 305 (416)
T PRK13034 244 -NDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER 305 (416)
T ss_pred -CcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc
Confidence 3555555555433221 122222222222 222211 112345677777778888877665
No 267
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.53 E-value=3.7e-12 Score=129.25 Aligned_cols=203 Identities=14% Similarity=0.173 Sum_probs=138.5
Q ss_pred ccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCC-----cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH
Q 013892 135 ETQGLFSADSIERAWQILDQIPGRATGAYSHS-----QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 209 (434)
Q Consensus 135 ~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~-----~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 209 (434)
.+....|+++++++.+.+.... ...|.-. .-+..+++.+++++ | .+..+++++++.++.+++..
T Consensus 88 lg~s~l~~~vieAv~~~~~~y~---~l~~~l~~g~~g~r~~~le~~lA~l~----g----ae~alvv~sg~aAi~l~l~~ 156 (454)
T TIGR00474 88 LGRAPLAEEAIEAVTDAARGYS---NLEYDLETGKRGSRYSHVEGLLCELT----G----AEDALVVNNNAAAVLLALNT 156 (454)
T ss_pred CCCCCCCHHHHHHHHHHHhccc---chhccccccccchHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHH
Confidence 3344678999999998887642 1123211 11467778888876 3 23355666777888888866
Q ss_pred HhcCCCCEEEEcCCCChh------HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC
Q 013892 210 LIRSENDGILCPIPQYPL------YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (434)
Q Consensus 210 l~~~~gd~Vlv~~p~y~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt 283 (434)
+ .+||+|+++...|.. +...++..|++++.++.+. ..+++++++++++ ++++|++.+++|++
T Consensus 157 l--~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~------~T~lv~~~h~sN~~ 224 (454)
T TIGR00474 157 L--AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITE------NTALLLKVHTSNYR 224 (454)
T ss_pred h--CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCc------CCEEEEEEccCccc
Confidence 5 689999999876532 2345677899999987642 3578999999977 89999999999995
Q ss_pred --c--cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCC----ccc-hHHHHhhhCCCCCCceEEEEecCCCCCCC
Q 013892 284 --G--QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK----FHS-FKKVSRSMGYGEKDISLVSFQSVSKGYYG 354 (434)
Q Consensus 284 --G--~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~----~~s-~~~~~~~l~~~~~~~~~i~i~S~SK~~~g 354 (434)
| .+.+ +++|+++|+++|+++++|...+-+ .+..+ ..+ +.... .++ -| ++++|.+|.++
T Consensus 225 ~~G~~~~~d---l~~I~~la~~~g~~vivD~~sG~l--~~~~~~gl~~~p~~~~~~-~~G---aD---iv~fSg~K~Lg- 291 (454)
T TIGR00474 225 IVGFTEEVS---IAELVALGREHGLPVMEDLGSGSL--VDLSRYGLPDEPTVQEVI-AAG---VD---LVTFSGDKLLG- 291 (454)
T ss_pred ccCCCCCCC---HHHHHHHHHHcCCeEEEECCCccc--ccchhccCCCCcccccHh-HcC---CC---EEEecCccccC-
Confidence 5 3566 999999999999999999864331 11000 001 11111 111 23 78899999884
Q ss_pred CCCceeEEEEEecCCHHHHHHHHH
Q 013892 355 ECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 355 ~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
|-.+|++++ .+++++++.+
T Consensus 292 --Gp~~G~i~g---~~~~i~~l~~ 310 (454)
T TIGR00474 292 --GPQAGIIVG---KKELIERLKK 310 (454)
T ss_pred --CCeEEEEEE---CHHHHHhhhh
Confidence 446899976 7788776543
No 268
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.53 E-value=9e-13 Score=125.52 Aligned_cols=234 Identities=13% Similarity=0.100 Sum_probs=153.3
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC
Q 013892 137 QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (434)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd 216 (434)
...+.+++++++.++-.. ....|+...-...+.+.+++. +| .+.+++++++|++..+.+...+ .||+
T Consensus 9 ~~g~~~~m~eam~~a~~~----~~~~YG~D~~~~~~e~~~ae~----~g----~~a~~Fv~sGT~aN~lal~~~~-~~~~ 75 (342)
T COG2008 9 VAGPTPEMREALAAANAV----GDDVYGEDPTTNALEQRIAEL----FG----KEAALFVPSGTQANQLALAAHC-QPGE 75 (342)
T ss_pred cCCCCHHHHHHHHhcccc----CCCCCCCCHHHHHHHHHHHHH----hC----CceEEEecCccHHHHHHHHHhc-CCCC
Confidence 446677787776554211 255676655444455555544 44 3789999999999999999999 7999
Q ss_pred EEEEcCCCChhHHH--HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHH
Q 013892 217 GILCPIPQYPLYSA--SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (434)
Q Consensus 217 ~Vlv~~p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~ 294 (434)
.|++..-.|-.... .++..+ .+.+++..+..+-.+++++++..++.-.--...++++++.|.+|--|+++|.+++++
T Consensus 76 ~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~ 154 (342)
T COG2008 76 SVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEA 154 (342)
T ss_pred eEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHH
Confidence 99999887764332 233332 122333334334489999999998751112335667777777778999999999999
Q ss_pred HHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHH
Q 013892 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (434)
Q Consensus 295 i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~ 374 (434)
|.++|+++|+.|..|.+--....... ..+...+... -| ++.-++||+. |+.+|.+++ ++.++++
T Consensus 155 i~~~~k~~~l~LHmDGAR~~nA~val--g~~~~~~~~~-----~D---~v~~~~tK~g----~~~~gAiv~--gn~~~~~ 218 (342)
T COG2008 155 ISAVCKEHGLPLHMDGARLANALVAL--GVALKTIKSY-----VD---SVSFCLTKGG----GAPVGAIVF--GNRDFAK 218 (342)
T ss_pred HHHHHHHhCCceeechHHHHHHHHHc--CCCHHHHHhh-----CC---EEEEecccCC----cceeeeEEE--cCHHHHH
Confidence 99999999999999997644322221 1233333332 23 3445789985 677888876 5999999
Q ss_pred HHHHHhhcc---cCCchHHHHHHHHHcCC
Q 013892 375 QIYKVASVN---LCSNISGQILASLVMSP 400 (434)
Q Consensus 375 ~l~~~~~~~---~~~~~~~q~~~~~~l~~ 400 (434)
++...+... ..-..+..+.....|++
T Consensus 219 ~a~~~rK~~Ggl~~k~r~laA~~~~~l~~ 247 (342)
T COG2008 219 RARRWRKRAGGLMRKARFLAAQGLYALED 247 (342)
T ss_pred HHHHHHHHhcccHhhhhHHHHHHHHHHhc
Confidence 987765422 12233334444555554
No 269
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.52 E-value=1e-12 Score=127.50 Aligned_cols=268 Identities=14% Similarity=0.126 Sum_probs=174.8
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....|||..+ -..-+|.++++++++.+..-- ....|.. +.+.++++.+.+.. + ..+.++++++++|
T Consensus 41 G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h-~sn~~~~-----~~~~~la~~L~~~s--~-~~d~vff~NSGaE 111 (404)
T COG4992 41 GREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH-VSNLFYN-----EPQAELAEKLVELS--P-FADRVFFCNSGAE 111 (404)
T ss_pred CCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh-cccccCC-----hHHHHHHHHHHhhC--c-cccEEEEcCCcHH
Confidence 3446676655 345688999999887776432 1223322 33444555544321 1 3789999999999
Q ss_pred HHHHHHHHHhc--C-C-CCEEEEcCCCChhHHHHHHHcCCeEEEE----ecCCCC---CCCCCHHHHHHHHHHHHhcCCC
Q 013892 202 AVHMMMQLLIR--S-E-NDGILCPIPQYPLYSASIALHGGTLVPY----YLDEAT---GWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 202 al~~~l~~l~~--~-~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~~----~~~~~~---~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
|+..++....+ . + ..+|+...-+|.+-.-..-..+.+..+. |+.+.- .|+ |++++++++++ +
T Consensus 112 A~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-Di~al~~ai~~------~ 184 (404)
T COG4992 112 ANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-DIEALEAAIDE------D 184 (404)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-CHHHHHHHhcc------C
Confidence 99999988642 1 1 3478888877765433222222222111 111110 111 89999999998 7
Q ss_pred eeEEEEecCCCCCccCCCH-HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCC
Q 013892 271 VRALVVINPGNPTGQVLAE-ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS 349 (434)
Q Consensus 271 ~~~i~l~~p~NPtG~~~~~-~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~S 349 (434)
+.+|++.--+--.|++.+. +.++++.++|++||+++|.||+..++...+. +..+. .....|| |-++.
T Consensus 185 taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk--~fA~e-----~~gV~PD-----I~tla 252 (404)
T COG4992 185 TAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGK--LFAYE-----HYGVEPD-----ILTLA 252 (404)
T ss_pred eEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccch--HHHHH-----HhCCCCC-----EEEee
Confidence 9888888778888887655 5799999999999999999999999655554 33221 1124477 23678
Q ss_pred CCCCCCCCceeEEEEEecCCHHHHHHHHHH-hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 013892 350 KGYYGECGKRGGYMEVTGFSAEVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKA 428 (434)
Q Consensus 350 K~~~g~~G~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 428 (434)
|+++ .|..+|.+++ .+.+.+.+..- +..+...|+++.+++...++--. -+...++.++.-+.+.+.|+++...
T Consensus 253 K~Lg--GG~PigA~la---~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~-~e~ll~~v~~~g~~~~~~L~~l~~~ 326 (404)
T COG4992 253 KALG--GGFPIGAMLA---TEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLL-EEGLLENVREKGEYLLQRLRELKRR 326 (404)
T ss_pred cccc--CCccceeeEE---chhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHc-chhHHHHHHHHHHHHHHHHHHHhhc
Confidence 9995 5999999987 55545544322 33566888888888777665311 1356677777777888888876553
No 270
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.51 E-value=4.6e-12 Score=126.64 Aligned_cols=199 Identities=18% Similarity=0.248 Sum_probs=141.6
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH-HHHcCCe
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS-IALHGGT 238 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~-~~~~g~~ 238 (434)
.-.|.....+.+|.+++++++ | .+.++.++.++.|+.+++...+ ++||.| +..+|...... +...|+.
T Consensus 71 Dd~Yagd~s~~~LE~~vAe~l----G----~e~aV~v~sGTaAl~ll~~l~v-~pGd~V--p~n~~f~Tt~ahI~~~Ga~ 139 (460)
T PRK13237 71 DEAYAGSRNFYHLEETVQEYY----G----FKHVVPTHQGRGAENLLSRIAI-KPGQYV--PGNMYFTTTRYHQELNGGI 139 (460)
T ss_pred chhhcCCCcHHHHHHHHHHHH----C----CCeEEEeCCHHHHHHHHHHhCC-CCcCEE--CCccchHhhHHHHHhCCcE
Confidence 345888888999999999998 3 4569999999999998766666 799965 55545544443 7788886
Q ss_pred EEEEecC--------CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEc
Q 013892 239 LVPYYLD--------EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQRAIVDFCKKEGLVLLAD 309 (434)
Q Consensus 239 ~~~~~~~--------~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~D 309 (434)
.+-+..+ ...++.+|++.|+++|++.. ..+++++.+.+++|-. |...|.+++++|.++|++||+.||+|
T Consensus 140 fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~--~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D 217 (460)
T PRK13237 140 FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD 217 (460)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhcccc--CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence 5555322 23457899999999998531 1256678888898988 79999999999999999999999999
Q ss_pred cCCCCC-c-cC----CCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh
Q 013892 310 EVYQEN-V-YV----PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (434)
Q Consensus 310 eay~~~-~-~~----~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 380 (434)
.+.... . |- ..-.-.++..+++++. .+.| +++.|++|.+ + .+. +|+++. .++++.+++....
T Consensus 218 aAra~gna~fI~~re~~y~~~~i~ei~~e~~-s~aD---~~t~S~~K~~-~-~~~-GG~i~t--~D~eL~~~~r~~~ 285 (460)
T PRK13237 218 ATRCVENAYFIKEREEGYQDKSIKEIVHEMF-SYAD---GCTMSGKKDC-L-VNI-GGFLAM--NDEELFDEAKELV 285 (460)
T ss_pred CcchhcChhhhcccccccCCCcHhHHhhhcc-CcCc---EEEEeCCCCC-C-CCC-ceEEEE--CCHHHHHHHHHhc
Confidence 988632 1 00 0001123444455554 2344 6677899998 3 233 677764 4899999988774
No 271
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.51 E-value=4.7e-12 Score=128.08 Aligned_cols=277 Identities=13% Similarity=0.054 Sum_probs=158.7
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCC-CCCCEEE-cCCh
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPA-DPNDIFL-TDGA 199 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~-~~~~i~~-t~G~ 199 (434)
....||+..+ -..-+|.+++++.+++.+... .... ....+.+..+++.+.+....+. ..+.+++ ++++
T Consensus 34 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~~~---~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG 108 (412)
T TIGR02407 34 GKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGI--IHSL---DMATEAKREFLETFNEIILKPRGLDYKVQFPGPTG 108 (412)
T ss_pred CCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccc--eecc---ccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCc
Confidence 3446666554 234588899999998875321 1111 1112344455555544311011 1124655 5889
Q ss_pred HHHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHH-cCC------------eEEEEecCCCCCC-CCCHHHHHHHHHHH
Q 013892 200 SPAVHMMMQLLIR-SENDGILCPIPQYPLYSASIAL-HGG------------TLVPYYLDEATGW-GLETSEVKKQLEAA 264 (434)
Q Consensus 200 ~~al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~-~g~------------~~~~~~~~~~~~~-~~d~~~l~~~l~~~ 264 (434)
++++..+++.... ....+|+...-+|.+....... .|. .+..+|....... .-+++.+++.+++.
T Consensus 109 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~ 188 (412)
T TIGR02407 109 TNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDS 188 (412)
T ss_pred hHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhc
Confidence 9999999887642 2346799888888876544332 221 1122222110000 02466777777643
Q ss_pred HhcCCCeeEEEEecCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEE
Q 013892 265 KAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLV 343 (434)
Q Consensus 265 ~~~g~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i 343 (434)
..+..++.+|++.-.+++.|. ..+.+.+++|.++|++||+++|+||++.++...+. ...+ +.....|| ++
T Consensus 189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~--~~a~-----~~~~v~PD--i~ 259 (412)
T TIGR02407 189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGT--FFSF-----EPAGIEPD--IV 259 (412)
T ss_pred cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch--hHHh-----cccCCCCC--EE
Confidence 211124566665555888898 57889999999999999999999999998533332 1111 11112366 22
Q ss_pred EEecCCCCCCCCC-CceeEEEEEecCCHHHHHHHHHH-hhcccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHH
Q 013892 344 SFQSVSKGYYGEC-GKRGGYMEVTGFSAEVREQIYKV-ASVNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILS 420 (434)
Q Consensus 344 ~i~S~SK~~~g~~-G~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~ 420 (434)
+|||.+ | + |+|+|++++ ++++ +.+... ...+...++++..++...++. .+. ....++.++..+.+.+
T Consensus 260 ---~~~K~l-g-~~G~pigav~~---~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~-~~l~~~~~~~g~~l~~ 329 (412)
T TIGR02407 260 ---CLSKSI-S-GYGLPLALTLI---KPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSD-DAFEKAVQRKSEIIQE 329 (412)
T ss_pred ---Eechhc-c-CCccceeEEEE---chhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHH
Confidence 578999 4 6 999999987 6665 444322 223445666655554444431 111 2456666666777777
Q ss_pred HHHHHHH
Q 013892 421 SLARRAK 427 (434)
Q Consensus 421 ~L~~~~~ 427 (434)
.|++...
T Consensus 330 ~l~~l~~ 336 (412)
T TIGR02407 330 RLDRIVA 336 (412)
T ss_pred HHHHHHh
Confidence 7766543
No 272
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.51 E-value=6.3e-12 Score=127.73 Aligned_cols=279 Identities=14% Similarity=0.086 Sum_probs=157.7
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC-CEEE-cCCh
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFL-TDGA 199 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~-t~G~ 199 (434)
....||+..+ -..-+|.+.+++.+++..... ....+. ..+.+..+++.+.+....+...+ .+++ ++++
T Consensus 38 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~~~~~----~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG 112 (425)
T PRK09264 38 GKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGI-THGLDM----HTTAKREFLETFEETILKPRGLDYKVQFTGPTG 112 (425)
T ss_pred CCEeeecccchhhccCCCCCHHHHHHHHHHHHhccc-cccccc----CcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCH
Confidence 3345666544 234578899999888875321 011111 12344445555443211111122 5655 5799
Q ss_pred HHHHHHHHHHHhcC-CCCEEEEcCCCChhHHHHHHHc-CC------------eEEEEecCCCCCCC-CCHHHHHHHHHHH
Q 013892 200 SPAVHMMMQLLIRS-ENDGILCPIPQYPLYSASIALH-GG------------TLVPYYLDEATGWG-LETSEVKKQLEAA 264 (434)
Q Consensus 200 ~~al~~~l~~l~~~-~gd~Vlv~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~~~~-~d~~~l~~~l~~~ 264 (434)
++|+..+++....- ...+|+....+|.+........ |- .+..+|........ -|++.+++.+++.
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~ 192 (425)
T PRK09264 113 TNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDS 192 (425)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhc
Confidence 99999998876422 3467888888888765432222 10 12223322100000 2677888888653
Q ss_pred HhcCCCeeEEEEecCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEE
Q 013892 265 KAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLV 343 (434)
Q Consensus 265 ~~~g~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i 343 (434)
..+..++.+|++.-...-.|. +.+.+.+++|.++|++||+++|+||++.++...+. ...+. ..+ ..+| +
T Consensus 193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~--~~~~~----~~~-v~PD--i- 262 (425)
T PRK09264 193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGT--FFSFE----RAG-ITPD--I- 262 (425)
T ss_pred cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccH--HHHHh----hcC-CCCC--E-
Confidence 211124556655544555676 56889999999999999999999999998544332 21111 111 2366 2
Q ss_pred EEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH-HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHH
Q 013892 344 SFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK-VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSL 422 (434)
Q Consensus 344 ~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L 422 (434)
-+|||++ |-.|+++|++++ ++++ ..+.. ....+...++++..++...++....-....++.++..+.+.+.|
T Consensus 263 --~t~~K~l-~~~G~pigav~~---~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l 335 (425)
T PRK09264 263 --VTLSKSI-SGYGLPMALVLI---KPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERL 335 (425)
T ss_pred --EEecccc-CCCccceEEEEE---chhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 3678999 534999999987 6665 33322 12233455566655554444211011246667777777777777
Q ss_pred HHHHH
Q 013892 423 ARRAK 427 (434)
Q Consensus 423 ~~~~~ 427 (434)
++...
T Consensus 336 ~~l~~ 340 (425)
T PRK09264 336 EEIAA 340 (425)
T ss_pred HHHHH
Confidence 76543
No 273
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.50 E-value=3.7e-12 Score=124.68 Aligned_cols=258 Identities=14% Similarity=0.140 Sum_probs=181.8
Q ss_pred ccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc
Q 013892 133 RSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (434)
Q Consensus 133 ~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~ 212 (434)
+.-||...+++|++++.+.. .+...+. ..++.+.+.+.+...++.. +.+-++++++++.++..++..++
T Consensus 9 l~PGP~~v~~~V~~am~~~~-------~~h~s~~--F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~- 77 (383)
T COG0075 9 LTPGPVPVPPRVLLAMARPM-------VGHRSPD--FVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLV- 77 (383)
T ss_pred eeCCCCCCCHHHHHHhcCCC-------CCCCCHH--HHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhcc-
Confidence 33446677888887754321 2223322 3445555555555555522 23556777889999999999999
Q ss_pred CCCCEEEEcCCCChh--HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHH
Q 013892 213 SENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (434)
Q Consensus 213 ~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~ 290 (434)
.|||+|++...+.++ +.++++.+|++++.+...... .+|+++++++|++ +++.++|.++|.-.+||+..+
T Consensus 78 ~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~--~v~p~~v~~~L~~----~~~~~~V~~vH~ETSTGvlnp-- 149 (383)
T COG0075 78 EPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGE--AVDPEEVEEALDK----DPDIKAVAVVHNETSTGVLNP-- 149 (383)
T ss_pred CCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCC--CCCHHHHHHHHhc----CCCccEEEEEeccCcccccCc--
Confidence 799999999888765 788999999999999887543 7899999999984 236889999999999999998
Q ss_pred HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH
Q 013892 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (434)
Q Consensus 291 ~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~ 370 (434)
+++|.++|++||.++|+|.+=+ +++.. ..+ .+++ -| +++.+--|.+++-||+ |.+.+ ++
T Consensus 150 -l~~I~~~~k~~g~l~iVDaVsS---~Gg~~--~~v----d~wg---iD---v~itgSQK~l~~PPGl--a~v~~---S~ 208 (383)
T COG0075 150 -LKEIAKAAKEHGALLIVDAVSS---LGGEP--LKV----DEWG---ID---VAITGSQKALGAPPGL--AFVAV---SE 208 (383)
T ss_pred -HHHHHHHHHHcCCEEEEEeccc---CCCcc--cch----hhcC---cc---EEEecCchhccCCCcc--ceeEE---CH
Confidence 9999999999999999999866 34431 111 1111 23 6677779999888885 55554 66
Q ss_pred HHHHHHHHH-------------------hhcccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 013892 371 EVREQIYKV-------------------ASVNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARRAKAN 429 (434)
Q Consensus 371 ~~~~~l~~~-------------------~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~ 429 (434)
+..+.+... ......++...-++....|+.- +-++...+++++..+.+++.++.++..+
T Consensus 209 ~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~ 288 (383)
T COG0075 209 RALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLEL 288 (383)
T ss_pred HHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 666666422 1123355666666666666542 2267888999999999999998876544
Q ss_pred h
Q 013892 430 I 430 (434)
Q Consensus 430 ~ 430 (434)
+
T Consensus 289 ~ 289 (383)
T COG0075 289 F 289 (383)
T ss_pred c
Confidence 3
No 274
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.50 E-value=2.6e-12 Score=129.16 Aligned_cols=250 Identities=14% Similarity=0.074 Sum_probs=157.1
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-----CCC
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----SEN 215 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-----~~g 215 (434)
+|.+++++.+.+.+.. ..+. ....+....+++++.+.. ..+.+++++++++|+..+++.+.. .+|
T Consensus 54 ~p~v~~a~~~q~~~~~----~~~~--~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~ 123 (395)
T PRK03715 54 NPGMVEALAAQAEKLI----NPSP--AFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEANEGAIKLARKWGRKHKNG 123 (395)
T ss_pred CHHHHHHHHHHHHhcc----cccc--cccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCC
Confidence 6889999988887532 1121 123467778888886542 246899999999999999988741 123
Q ss_pred -CEEEEcCCCChhHHH-HHHHcCCeEEE---EecCCCCCC----CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC
Q 013892 216 -DGILCPIPQYPLYSA-SIALHGGTLVP---YYLDEATGW----GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (434)
Q Consensus 216 -d~Vlv~~p~y~~~~~-~~~~~g~~~~~---~~~~~~~~~----~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~ 286 (434)
.+|+..+..|..... .+...|..... .|... ++ ..|++.+++.+++ ++.+|++.-.++..|..
T Consensus 124 r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~------~~aavi~Epv~~~gG~~ 195 (395)
T PRK03715 124 AYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVP--GFPKAELNDIASVEKLITD------KTVAVMLEPVQGEGGVI 195 (395)
T ss_pred CcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCC--CceeeCCchHHHHHHHcCC------CceEEEEeCCcCCCCCc
Confidence 578888888876543 33333322111 11110 11 1378888887754 57676666556666766
Q ss_pred C-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 287 L-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 287 ~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
. +.+.+++|.++|++||+++|+||++.++...+. .... ..++ ..+| +.+|+|+++ .|..+|.+++
T Consensus 196 ~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~--~~a~----~~~g-v~PD-----i~t~gK~lg--~G~p~~av~~ 261 (395)
T PRK03715 196 PATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGT--LFAY----ELSG-IEPD-----IMTLGKGIG--GGVPLAALLA 261 (395)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcc--hhhH----hhcC-CCCc-----eeeehhhhh--CCcceEEEEE
Confidence 4 688999999999999999999999998433332 1111 1111 2366 247899995 4899999976
Q ss_pred ecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.+++..........+.+.++++.+++...|+.-+. ++.+++.++.-+.+.+.|++..
T Consensus 262 ---~~~i~~~~~~~~~~T~~g~pl~~aaala~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~ 318 (395)
T PRK03715 262 ---KAEVAVFEAGDQGGTYNGNPLMTAVGVAVISQLLA-PGFLEGVRARGEYLKEKLLELS 318 (395)
T ss_pred ---ccccccccCCCcCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHh
Confidence 66664221112223435667777766666543211 2456677777777777777653
No 275
>PRK02769 histidine decarboxylase; Provisional
Probab=99.49 E-value=1.3e-11 Score=123.11 Aligned_cols=184 Identities=13% Similarity=-0.001 Sum_probs=131.1
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCE--EEcCChHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecC
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDI--FLTDGASPAVHMMMQLLI-RSENDGILCPIPQYPLYSASIALHGGTLVPYYLD 245 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i--~~t~G~~~al~~~l~~l~-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~ 245 (434)
..++.+.+.+++.+.+|. +++++ ++|+|+|+++...+.... ..+++.|++++-.|+.....++..|.+.+.++.+
T Consensus 63 ~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~ 140 (380)
T PRK02769 63 SFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL 140 (380)
T ss_pred hHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence 456666666666666664 33444 889999999876654432 1467899999999999999999999988888886
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC---CEEEEccCCCCCccCCCCC
Q 013892 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG---LVLLADEVYQENVYVPEKK 322 (434)
Q Consensus 246 ~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~---~~li~Deay~~~~~~~~~~ 322 (434)
+ ++.+|+++|++++++. +.++.+|+++.++|+||.+-+ +++|.++|+++| +++++|.+|+.+...-...
T Consensus 141 ~--~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~ 212 (380)
T PRK02769 141 P--NGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNN 212 (380)
T ss_pred C--CCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCc
Confidence 4 4579999999999873 335889999999999999998 899999999998 6999999999854421100
Q ss_pred ccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHH
Q 013892 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (434)
Q Consensus 323 ~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 376 (434)
...+ ++. ..+. .+.-|..|.+ | .-..+|.+.+ .++..+.+
T Consensus 213 ~~~~-----d~~---~~vD-sis~s~HK~~-~-~P~g~G~l~~---r~~~~~~~ 252 (380)
T PRK02769 213 PPPF-----SFA---DGID-SIAISGHKFI-G-SPMPCGIVLA---KKKYVERI 252 (380)
T ss_pred cccC-----Ccc---CCCC-EEEECCcccC-C-CCCCcEEEEE---ehhhhhhc
Confidence 0001 000 0112 4556889966 3 2355787766 45555544
No 276
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.49 E-value=3.3e-12 Score=129.06 Aligned_cols=259 Identities=12% Similarity=0.037 Sum_probs=164.5
Q ss_pred CCHHHHHHHHHHHHcCCCC---CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCC--
Q 013892 140 FSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE-- 214 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~-- 214 (434)
.++.+.+++...+.+.... +..-|+....+.++.....+...+.+| .+.-+|-.-+|+ .|...++.+++ +|
T Consensus 61 ~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~--a~~anvqp~Sg~-~An~~v~~all-~~~~ 136 (493)
T PRK13580 61 SSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG--AEHAYVQPHSGA-DANLVAFWAIL-AHKV 136 (493)
T ss_pred CCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC--CCcccccCCCcH-HHHHHHHHHHh-cccc
Confidence 4666777665555443211 123344455566777777777777676 333456556655 55556666666 44
Q ss_pred -----------------------------CCEEEEcCCCChhHHH-----HHHHcCCeEEEEecCCCCCCCCCHHHHHHH
Q 013892 215 -----------------------------NDGILCPIPQYPLYSA-----SIALHGGTLVPYYLDEATGWGLETSEVKKQ 260 (434)
Q Consensus 215 -----------------------------gd~Vlv~~p~y~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 260 (434)
||+|+..++....+.. .+.....+.+.|+++.+ +..+|.+++++.
T Consensus 137 ~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~-~g~iD~d~l~~~ 215 (493)
T PRK13580 137 ESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD-TGLLDYDEIAAL 215 (493)
T ss_pred cCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcc-cCccCHHHHHHH
Confidence 7999988777654422 12222356777777754 347999999999
Q ss_pred HHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCc
Q 013892 261 LEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDI 340 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 340 (434)
+++ .++.|+++..+|- |...+ +++|.++|+++|+++++|+++.-.++++.. .. .... ..+++
T Consensus 216 ~~~------~~plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~-~~------~~~~-~~~~~ 277 (493)
T PRK13580 216 ARE------FKPLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKV-FT------GDED-PVPHA 277 (493)
T ss_pred Hhh------cCCEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEEECchhhceecccc-ch------hhcC-CCCCC
Confidence 988 6778888888775 44667 899999999999999999999987776431 10 0000 00122
Q ss_pred eEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC-C-CCChHHHHHHHHHHHH
Q 013892 341 SLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP-P-KVGDESYESYCAERDG 417 (434)
Q Consensus 341 ~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~-~-~~~~~~~~~~~~~r~~ 417 (434)
. |+++|++|+| +|-++|++.+ ++++++.+.+... .++++..+..+++...+.. . ....+.+++..++.+.
T Consensus 278 D-~vtgT~hKaL---~GP~GG~I~~---~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~ 350 (493)
T PRK13580 278 D-IVTTTTHKTL---RGPRGGLVLA---KKEYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARA 350 (493)
T ss_pred c-EEEeCChhhc---cCCCeEEEEe---cHHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH
Confidence 2 7899999988 4777899977 8888888854443 3333333332222222221 1 1124567888888888
Q ss_pred HHHHHHHHHHH
Q 013892 418 ILSSLARRAKA 428 (434)
Q Consensus 418 l~~~L~~~~~~ 428 (434)
+.+.|.+++..
T Consensus 351 La~~L~~~G~~ 361 (493)
T PRK13580 351 LAEGFLKRGAR 361 (493)
T ss_pred HHHHHHhcCCC
Confidence 88888876543
No 277
>PRK15029 arginine decarboxylase; Provisional
Probab=99.49 E-value=3.5e-12 Score=135.34 Aligned_cols=243 Identities=14% Similarity=0.076 Sum_probs=158.0
Q ss_pred CCCCCcchH-HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEE
Q 013892 162 AYSHSQGIK-GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLV 240 (434)
Q Consensus 162 ~Y~~~~G~~-~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 240 (434)
....+.|.. +..+.+|+.+ | .....++++|+|.++..++.+++ .+||+|+++..||-+....+.+.|++++
T Consensus 199 ~L~~p~G~I~eAq~~aA~~f----g---A~~t~FlvNGST~gn~a~i~a~~-~~gd~Vlv~RN~HKSv~~al~L~ga~Pv 270 (755)
T PRK15029 199 SLLDHTGAFGESEKYAARVF----G---ADRSWSVVVGTSGSNRTIMQACM-TDNDVVVVDRNCHKSIEQGLILTGAKPV 270 (755)
T ss_pred CCCCCCcHHHHHHHHHHHHh----C---CCcEEEEeCChhHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHcCCeEE
Confidence 333444543 4444444443 4 23568999999999999999999 7999999999999999999999999999
Q ss_pred EEecCCCCCCCC----C-----HHHHHHHHHHHH----hcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 241 PYYLDEATGWGL----E-----TSEVKKQLEAAK----AKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 241 ~~~~~~~~~~~~----d-----~~~l~~~l~~~~----~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 307 (434)
+++..- +.|++ + .+.++++|+... .++.++++++|++|+. -|++.+ +++|+++|+++++.|+
T Consensus 271 yl~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~ll 345 (755)
T PRK15029 271 YMVPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLH 345 (755)
T ss_pred Eecccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEE
Confidence 986543 33443 3 889999986532 1233566999999988 899998 8999999999999999
Q ss_pred EccCCCCCc-cCCCCCccchHHHHh-hhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH-HH-HHHHHHHhh--
Q 013892 308 ADEVYQENV-YVPEKKFHSFKKVSR-SMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-EV-REQIYKVAS-- 381 (434)
Q Consensus 308 ~Deay~~~~-~~~~~~~~s~~~~~~-~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~-~~-~~~l~~~~~-- 381 (434)
+||||+... |.+. ++....+.. .......+ +++++|..|++ +++.-|.++.+..+. .+ .+++.....
T Consensus 346 vDEAhGah~~F~~~--~p~~sa~~~~~~~~~Gad--~~vvqStHKtL---~alTQaS~LHv~~~~~~id~~r~~~~l~~~ 418 (755)
T PRK15029 346 FDEAWYGYARFNPI--YADHYAMRGEPGDHNGPT--VFATHSTHKLL---NALSQASYIHVREGRGAINFSRFNQAYMMH 418 (755)
T ss_pred EECccccccccCcc--ccccccccccccccCCCc--eEEEEchhhcc---cchhhhhhheeCCCccccCHHHHHHHHHHH
Confidence 999998742 3221 111000100 00001123 58999999988 467666665443231 11 234443333
Q ss_pred cccCCchHHHHH---HHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 382 VNLCSNISGQIL---ASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 382 ~~~~~~~~~q~~---~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+++|+-+-.+. +...+.. +.+++..+.+.++...+++.+++.
T Consensus 419 qSTSPSY~LmASLD~ar~~m~~-~~G~~l~~~~i~~~~~~r~~l~~~ 464 (755)
T PRK15029 419 ATTSPLYAICASNDVAVSMMDG-NSGLSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_pred cCCCcHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHHHhc
Confidence 122344333332 2333322 135667777788888888777654
No 278
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.47 E-value=7.2e-12 Score=127.37 Aligned_cols=270 Identities=15% Similarity=0.135 Sum_probs=159.8
Q ss_pred Cccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
..||+..+ -..-+|.+.+++.+++..........|. .+.+..+|+.+.+... ...+.+++++++++|+
T Consensus 43 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~-----~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~ 115 (423)
T PRK05964 43 ELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFT-----HEPAERLAQRLVALTP--GGLDHVFFSDSGSVAV 115 (423)
T ss_pred EEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHH
Confidence 35565444 2244788999999988764310011222 2344555666554322 1246899999999999
Q ss_pred HHHHHHHhc-------CCCCEEEEcCCCChhHHHHHHHcCCe-------------EEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 204 HMMMQLLIR-------SENDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 204 ~~~l~~l~~-------~~gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
..+++.... ....+|+...-+|.+........... +..++....+....+++.+++.++.
T Consensus 116 e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~ 195 (423)
T PRK05964 116 EVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEK 195 (423)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHh
Confidence 999887531 12368999898888755433222111 1122221110001126777777753
Q ss_pred HHhcCCCeeEEEEec-CCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCce
Q 013892 264 AKAKGITVRALVVIN-PGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341 (434)
Q Consensus 264 ~~~~g~~~~~i~l~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 341 (434)
. +.++.+|++.- .++..|... +.+.+++|.++|++||+++|+||++.++...+. ...+ +.....+|
T Consensus 196 ~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~--~~a~-----~~~~v~pD-- 263 (423)
T PRK05964 196 H---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGT--LFAC-----EQAGVSPD-- 263 (423)
T ss_pred C---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc--hhHH-----HhcCCCCC--
Confidence 2 22566666653 377788766 889999999999999999999999988644332 1111 11112255
Q ss_pred EEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH-------hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHH
Q 013892 342 LVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV-------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (434)
Q Consensus 342 ~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 414 (434)
+ -+++|+++| .++++|+++. ++++++.+... ...+...++++..++...++.-+. +...++..+.
T Consensus 264 i---~~~~K~l~g-G~~p~~av~~---~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~-~~~~~~~~~~ 335 (423)
T PRK05964 264 I---MCLSKGLTG-GYLPLAATLC---TAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFED-EPVLERVAAL 335 (423)
T ss_pred e---eeeehhhhc-CcccceEEEE---cHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHH
Confidence 2 367899943 2389999877 89999887532 223335677777777666652110 1345555555
Q ss_pred HHHHHHHHHHH
Q 013892 415 RDGILSSLARR 425 (434)
Q Consensus 415 r~~l~~~L~~~ 425 (434)
-+.+.+.|++.
T Consensus 336 g~~l~~~l~~l 346 (423)
T PRK05964 336 SAGLAEGLEPF 346 (423)
T ss_pred HHHHHHHHHhh
Confidence 56666666554
No 279
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.46 E-value=2.7e-11 Score=123.63 Aligned_cols=274 Identities=13% Similarity=0.086 Sum_probs=159.2
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGAS 200 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~ 200 (434)
....||+..+ -..-+|.+.+++.++++.... ....+... +....+++.+.+... .. .+.++++++++
T Consensus 41 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~-~~~~~~~~----~~~~~lae~L~~~~p--~~~~~~v~f~~SGs 113 (445)
T PRK08593 41 GKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIH-YTPAYMYH----EPLVRLAKKLCELAP--GDFEKRVTFGLSGS 113 (445)
T ss_pred CCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccC-ccccccCC----HHHHHHHHHHHHhCC--CCCCCEEEECCchH
Confidence 3345666443 234578899999998876432 01111122 333444444444322 12 25899999999
Q ss_pred HHHHHHHHHHhcC-CCCEEEEcCCCChhHHHH-HHHcCCe-------------EEEEecCCC--CCCC-CCH-------H
Q 013892 201 PAVHMMMQLLIRS-ENDGILCPIPQYPLYSAS-IALHGGT-------------LVPYYLDEA--TGWG-LET-------S 255 (434)
Q Consensus 201 ~al~~~l~~l~~~-~gd~Vlv~~p~y~~~~~~-~~~~g~~-------------~~~~~~~~~--~~~~-~d~-------~ 255 (434)
+|+..+++....- ...+|+...-+|.+.... +...+.. +..++.... ..+. .+. +
T Consensus 114 eA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 193 (445)
T PRK08593 114 DANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLA 193 (445)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHH
Confidence 9999999865321 245788888888765433 2222211 222222111 0011 111 2
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~ 334 (434)
.+++.++.... ..++.+|++.-.+...|.+ .+.+.+++|.++|++||+++|+||+|.++...+. .... ..++
T Consensus 194 ~~~~~~~~~~~-~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~--~~a~----~~~g 266 (445)
T PRK08593 194 PLKEMFEKYLP-ADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGK--WSSI----SHFN 266 (445)
T ss_pred HHHHHHHhhcC-CCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCch--HHHH----HhcC
Confidence 33333322100 1256666666556667876 6888999999999999999999999988543332 1111 1111
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 413 (434)
..+| +-+++|+++ .|+++|++++ ++++++.+.... ..+.+.++++.+++...++.-+. ++..++.++
T Consensus 267 -v~pD-----i~t~gK~l~--~G~p~gav~~---~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~-~~l~~~~~~ 334 (445)
T PRK08593 267 -ITPD-----LMSFGKSLA--GGMPMSAIVG---RKEIMESLEAPAHLFTTGANPVSCAAALATIDMIED-ESLLQRSAE 334 (445)
T ss_pred -CCCC-----Eeeeccccc--CCcccEEEEE---cHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHH
Confidence 2366 227899994 5899999987 889888875322 23446777777776666643211 145566666
Q ss_pred HHHHHHHHHHHHH
Q 013892 414 ERDGILSSLARRA 426 (434)
Q Consensus 414 ~r~~l~~~L~~~~ 426 (434)
.-+.+.+.|++..
T Consensus 335 ~g~~l~~~L~~l~ 347 (445)
T PRK08593 335 KGEYARKRFDQWV 347 (445)
T ss_pred HHHHHHHHHHHHH
Confidence 6666777776654
No 280
>PRK06541 hypothetical protein; Provisional
Probab=99.46 E-value=2.2e-11 Score=124.71 Aligned_cols=272 Identities=17% Similarity=0.137 Sum_probs=163.2
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|.+++++.+++..........|. .+....+|+.+.+... ...+.+++++++++
T Consensus 51 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~-----~~~~~~la~~l~~~~p--~~~~~v~f~~sGse 123 (460)
T PRK06541 51 GKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYA-----HPPAIELAERLAALAP--GDLNRVFFTTGGSE 123 (460)
T ss_pred CCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccC-----CHHHHHHHHHHHHhCC--CCcCEEEEcCCcHH
Confidence 3345665443 2344788999999988864310011222 2333444555443322 22468999999999
Q ss_pred HHHHHHHHHhcC-------CCCEEEEcCCCChhHHHHHHHc-CCe------------EEEEecCCCC---CCCCC-----
Q 013892 202 AVHMMMQLLIRS-------ENDGILCPIPQYPLYSASIALH-GGT------------LVPYYLDEAT---GWGLE----- 253 (434)
Q Consensus 202 al~~~l~~l~~~-------~gd~Vlv~~p~y~~~~~~~~~~-g~~------------~~~~~~~~~~---~~~~d----- 253 (434)
|+..+++....- ...+|+...-+|.+........ |.. +..++....- .|+-+
T Consensus 124 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 203 (460)
T PRK06541 124 AVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFG 203 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHH
Confidence 999998875411 2467888888887765433221 111 1112211100 01222
Q ss_pred ---HHHHHHHHHHHHhcCCCeeEEEEecC-CCCCccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHH
Q 013892 254 ---TSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKK 328 (434)
Q Consensus 254 ---~~~l~~~l~~~~~~g~~~~~i~l~~p-~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~ 328 (434)
++.+++.++.. +.+..+.++..| +++.|.+.+ .+.+++|.++|+++|+++|+||+|.++...+. ....
T Consensus 204 ~~~~~~l~~~l~~~---~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~--~~a~-- 276 (460)
T PRK06541 204 RWAADRIEEAIEFE---GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGE--MFGC-- 276 (460)
T ss_pred HHHHHHHHHHHHhc---CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCch--hhhh--
Confidence 24555555431 223446666677 899998765 88899999999999999999999988522221 1111
Q ss_pred HHhhhCCCCCCceEEEEecCCCCCCCCCCc-eeEEEEEecCCHHHHHHHHHH-----hhcccCCchHHHHHHHHHcCCCC
Q 013892 329 VSRSMGYGEKDISLVSFQSVSKGYYGECGK-RGGYMEVTGFSAEVREQIYKV-----ASVNLCSNISGQILASLVMSPPK 402 (434)
Q Consensus 329 ~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~~~~~~l~~~~ 402 (434)
...+ ..+| ++ +|||++ | .|+ ++|++++ ++++++.+... ...+...++++.+++...++--+
T Consensus 277 --~~~g-v~PD--iv---t~gK~l-~-~G~~pigav~~---~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~ 343 (460)
T PRK06541 277 --ERFG-YVPD--II---TCAKGI-T-SGYSPLGAMIA---SDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFE 343 (460)
T ss_pred --hhcC-CCCC--EE---Eecccc-c-CCccceeEEEE---cHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 1111 2366 23 589999 4 687 9999987 88888887532 12244566677666666554311
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
-+..+++.++..+.+.+.|++..
T Consensus 344 -~~~~~~~~~~~g~~l~~~L~~l~ 366 (460)
T PRK06541 344 -REGLLDHVRDNEPAFRATLEKLL 366 (460)
T ss_pred -hccHHHHHHHHHHHHHHHHHHhh
Confidence 12466788888888888888764
No 281
>PLN03032 serine decarboxylase; Provisional
Probab=99.45 E-value=5.4e-11 Score=118.02 Aligned_cols=208 Identities=10% Similarity=-0.014 Sum_probs=141.9
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCE--EEcCChHHHHHHHHHHHhc-CCCCEEE
Q 013892 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI--FLTDGASPAVHMMMQLLIR-SENDGIL 219 (434)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i--~~t~G~~~al~~~l~~l~~-~~gd~Vl 219 (434)
.+++++.+.+.+...+....+.......++.+.+.+++.+.+| .+++++ ++|+|+|+++...+..... .++..|+
T Consensus 38 ~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi 115 (374)
T PLN03032 38 GELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILY 115 (374)
T ss_pred HHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEE
Confidence 3666666666543221122222223456777777777777767 456666 9999999999888776531 2456899
Q ss_pred EcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHH
Q 013892 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 220 v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~ 299 (434)
++.-.|......++..|..+..+|.+.+ ..+|+++|+++|++. .+ ++.+|+++..+|+||.+-+ +++|.++|
T Consensus 116 ~s~~~H~Sv~kaa~~lg~~~~~V~~d~~--g~id~~~L~~~i~~~--~~-~~~lvv~tagtt~tG~idp---i~eI~~i~ 187 (374)
T PLN03032 116 ASRESHYSVFKAARMYRMEAVKVPTLPS--GEIDYDDLERALAKN--RD-KPAILNVNIGTTVKGAVDD---LDRILRIL 187 (374)
T ss_pred eCCCceeHHHHHHHHcCCCCeEeeeCCC--CcCcHHHHHHHHHHc--CC-CCEEEEEEecCcCCccCCC---HHHHHHHH
Confidence 9999999999999999999888988754 489999999999762 11 4667888889999999977 88999999
Q ss_pred HHcC-----CEEEEccCCCCCccC--CCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHH
Q 013892 300 KKEG-----LVLLADEVYQENVYV--PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (434)
Q Consensus 300 ~~~~-----~~li~Deay~~~~~~--~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~ 372 (434)
+++| +++++|.+|+.+... ...+...+. ..+. -+.-|..|.+ | .-.-+|.+.. ....
T Consensus 188 ~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~----------~~vD-Sis~s~HK~~-g-~P~g~G~ll~---r~~~ 251 (374)
T PLN03032 188 KELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR----------KPIG-SVSVSGHKFL-G-CPMPCGVALT---RKKH 251 (374)
T ss_pred HHhCCCCCCeeEEEEccchhhhhhccCCCcccCCC----------cCCc-EEEECccccc-C-CCcCeEEEEE---Echh
Confidence 9996 599999999875321 111111110 0112 2455889965 4 3455777765 4455
Q ss_pred HHHH
Q 013892 373 REQI 376 (434)
Q Consensus 373 ~~~l 376 (434)
++.+
T Consensus 252 ~~~~ 255 (374)
T PLN03032 252 VKAL 255 (374)
T ss_pred hHhh
Confidence 5544
No 282
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.45 E-value=3.3e-11 Score=122.38 Aligned_cols=275 Identities=15% Similarity=0.082 Sum_probs=164.5
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|.+++++.+++..... ...|.... .+..+|+.+.+... -..+.+++++++++
T Consensus 74 G~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~--~~~~~~~~----~~~~lAe~L~~~~p--~~~~~v~f~~SGsE 145 (442)
T TIGR03372 74 GNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPL--HSQELLDP----LRALLAKTLAALTP--GKLKYSFFCNSGTE 145 (442)
T ss_pred CCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCC--cccccCCH----HHHHHHHHHHHhCC--CCcCEEEEeCCchH
Confidence 4446676554 345678899999998886542 33343333 33444444443222 12357999999999
Q ss_pred HHHHHHHHHhcC----CCCEEEEcCCCChhHHHHHHHcCCeEE----EEecCCCCC--CCCCHHHHHHHHHHHHhcCCCe
Q 013892 202 AVHMMMQLLIRS----ENDGILCPIPQYPLYSASIALHGGTLV----PYYLDEATG--WGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 202 al~~~l~~l~~~----~gd~Vlv~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~--~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
|+..+++....- ...+|+...-.|.+............. ..|+...-. --.|.+.+++.++.....+.++
T Consensus 146 A~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~v 225 (442)
T TIGR03372 146 SVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDV 225 (442)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcE
Confidence 999998875421 246799999888876544333221110 011111000 0126788888776533223356
Q ss_pred eEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCC
Q 013892 272 RALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSK 350 (434)
Q Consensus 272 ~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK 350 (434)
.+|++.-...-.|... +++.+++|.++|++||+++|+||++.++...+. +..+. ..+ ..|| |+ +|+|
T Consensus 226 AavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~--~~a~e----~~g-v~PD---iv--t~gK 293 (442)
T TIGR03372 226 AAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGK--MFACE----HEG-VQPD---IL--CLAK 293 (442)
T ss_pred EEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcccc--chhhh----hcC-CCCC---ee--eehh
Confidence 5666554455567655 577899999999999999999999988433322 22211 111 2367 22 4899
Q ss_pred CCCCCCC-ceeEEEEEecCCHHHHHHHHHH---hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 351 GYYGECG-KRGGYMEVTGFSAEVREQIYKV---ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 351 ~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.++ .| +.+|.+++ .+++.+.+... ...++..++++.+++.+.|+--+. +...++.++.-+.+.+.|++..
T Consensus 294 ~lg--~G~~Pigavv~---~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~-~~l~~~~~~~G~~l~~~L~~l~ 367 (442)
T TIGR03372 294 ALG--GGVMPIGATIA---TEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLE-KNLPAQAAIKGDFLLDGFQQLA 367 (442)
T ss_pred hhc--CCcccceEEEe---cHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 994 48 68999877 78888887421 224445677777777666643111 1345556666666777776654
Q ss_pred H
Q 013892 427 K 427 (434)
Q Consensus 427 ~ 427 (434)
.
T Consensus 368 ~ 368 (442)
T TIGR03372 368 A 368 (442)
T ss_pred H
Confidence 3
No 283
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.44 E-value=3.1e-11 Score=120.49 Aligned_cols=278 Identities=15% Similarity=0.131 Sum_probs=177.5
Q ss_pred CCCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCC-CCCCEEEcCCh
Q 013892 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGA 199 (434)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~-~~~~i~~t~G~ 199 (434)
+....|||..+ -..-+|.|+++++++++...- ....|.+.....++.+.+.+.+ +. ..+.+++++++
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h-~~~~~~~~e~~v~~ae~L~~~~------p~~~~~~~~f~~sG 126 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNH-THTRDLYYEPYVELAEKLTALA------PGSGLKKVFFGNSG 126 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhc-ccCCcccchhHHHHHHHHHHhC------CcccCCeEEecCCc
Confidence 34557787774 446789999999998887542 1334444332334444444433 22 45679999999
Q ss_pred HHHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHH-HHcC-------------CeEEEEecC--CCCCCCC--------CH
Q 013892 200 SPAVHMMMQLLIR-SENDGILCPIPQYPLYSASI-ALHG-------------GTLVPYYLD--EATGWGL--------ET 254 (434)
Q Consensus 200 ~~al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~-~~~g-------------~~~~~~~~~--~~~~~~~--------d~ 254 (434)
++|+..+++.... ..+..|+...-.|.+..... ...| ..+..+|.. ..+.|.. ..
T Consensus 127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~ 206 (447)
T COG0160 127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDAL 206 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHH
Confidence 9999999987642 23467888888887644432 2221 113333322 2222222 23
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhh
Q 013892 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 333 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l 333 (434)
+.++..+........++.++++.-.+.-.|.+. |++.++++.++|++||+++|+||+..++...+. +..+-..
T Consensus 207 ~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~--~fa~E~~---- 280 (447)
T COG0160 207 EYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGK--MFAFEHF---- 280 (447)
T ss_pred HHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc--chhhhhc----
Confidence 445555554444444566666666677788755 456789999999999999999999999665553 5554322
Q ss_pred CCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHH
Q 013892 334 GYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (434)
Q Consensus 334 ~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 413 (434)
...|| +| ++||.+. .|+.+|.++. .+++.+........+...|+++.+++.+.|+--+. +.+.++-.+
T Consensus 281 -gv~PD--iv---t~aK~ig--~G~Pl~avv~---r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~-e~L~~~a~~ 348 (447)
T COG0160 281 -GVEPD--IV---TLAKSLG--GGLPLSAVVG---RAEIMDWPPGGHGGTFGGNPVACAAALAVLDVIEE-ENLLERAAE 348 (447)
T ss_pred -CCCCC--EE---Eeccccc--CCCceeEEec---cHHhcccCCcccCCCCCcCHHHHHHHHHHHHHHHH-ccHHHHHHH
Confidence 13477 23 7899994 4999999977 88877733333445568888888888888752111 256666677
Q ss_pred HHHHHHHHHHHHHHH
Q 013892 414 ERDGILSSLARRAKA 428 (434)
Q Consensus 414 ~r~~l~~~L~~~~~~ 428 (434)
.-+++.+.|.++..+
T Consensus 349 ~G~~l~~~L~~l~~~ 363 (447)
T COG0160 349 LGEYLRDRLEELQEK 363 (447)
T ss_pred HHHHHHHHHHHHHhh
Confidence 777777777776554
No 284
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.42 E-value=2e-11 Score=125.14 Aligned_cols=249 Identities=13% Similarity=0.090 Sum_probs=151.0
Q ss_pred CCHHHHHHHHHHHHcCCC--CCCCCCCC-CcchHH----HHHHHHHHHHhhcCCCCCCCCEEEc---CChHHHHHHHHHH
Q 013892 140 FSADSIERAWQILDQIPG--RATGAYSH-SQGIKG----LRDTIAAGIEARDGFPADPNDIFLT---DGASPAVHMMMQL 209 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~--~~~~~Y~~-~~G~~~----lr~~ia~~~~~~~g~~~~~~~i~~t---~G~~~al~~~l~~ 209 (434)
+++.+++.+...+.+... .....|.. ..-... .|+.+++++ | .+++++.++ +|++++...++.+
T Consensus 46 ~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf----~--a~~~~~~~~~~~~sgt~an~~v~~a 119 (452)
T PTZ00094 46 TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF----G--LDPEEWGVNVQPYSGSPANFAVYTA 119 (452)
T ss_pred CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCcccceeecCCCchHHHHHHHHHH
Confidence 478888888777754321 01111211 111222 334455554 4 456677666 7888999998999
Q ss_pred HhcCCCCEEEEcCCCChhHHHHHHH----------cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC
Q 013892 210 LIRSENDGILCPIPQYPLYSASIAL----------HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (434)
Q Consensus 210 l~~~~gd~Vlv~~p~y~~~~~~~~~----------~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p 279 (434)
++ ++||.|++....|..+...... .+.++..++++.+ ..+|+++|++.++.. +++++++.+
T Consensus 120 l~-~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~--g~id~~~L~~~l~~~-----~~~lvi~~~- 190 (452)
T PTZ00094 120 LL-QPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEK--GLIDYDKLEELAKAF-----RPKLIIAGA- 190 (452)
T ss_pred hc-CCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCC--CCcCHHHHHHHHHHh-----CCCEEEEeC-
Confidence 87 7999999988887765443211 1233445555543 479999999999753 566666543
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce
Q 013892 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (434)
Q Consensus 280 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R 359 (434)
+.+|...+ +++|.++|+++|+++++|+++.-.....+..... +. .-| +++.|.+|+|. |-+
T Consensus 191 -s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~-------~~--~~D---~l~~S~hK~l~---GP~ 251 (452)
T PTZ00094 191 -SAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSP-------FP--YAD---VVTTTTHKSLR---GPR 251 (452)
T ss_pred -CCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCC-------CC--CCc---EEEcCCccCCC---CCC
Confidence 34999988 8888899999999999999998765543210001 00 123 77899999883 666
Q ss_pred eEEEEEecCCHHHHHHHHHHhh------cccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 360 GGYMEVTGFSAEVREQIYKVAS------VNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 360 ~G~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+|++.+ .+++.+.+..... ..++++....+++...++.- ...++..++..+.++.+.+.|.+.
T Consensus 252 Gg~l~~---~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~ 322 (452)
T PTZ00094 252 SGLIFY---RKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR 322 (452)
T ss_pred ceEEEE---ecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC
Confidence 788876 4444443322211 11133334333334444321 123455667777777777777654
No 285
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.42 E-value=5.7e-11 Score=121.42 Aligned_cols=274 Identities=15% Similarity=0.118 Sum_probs=166.3
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|++++++.+.+..... ...|... +.+..+|+.+.+.. +...+.+++++++++
T Consensus 81 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~--~~~~~~~----~~~~~lae~L~~~~--p~~~~~v~f~~SGsE 152 (459)
T PRK11522 81 GQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPL--HSQELLD----PLRAMLAKTLAALT--PGKLKYSFFCNSGTE 152 (459)
T ss_pred CCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcc--cccccCC----HHHHHHHHHHHHhC--CCCCCEEEEeCCchH
Confidence 3446776555 335578899999998886532 2223333 33444455444332 223368999999999
Q ss_pred HHHHHHHHHhcC---C-CCEEEEcCCCChhHHHHHHHc-CCeEEE---EecCCC---CCCCCCHHHHHHHHHHHHhcCCC
Q 013892 202 AVHMMMQLLIRS---E-NDGILCPIPQYPLYSASIALH-GGTLVP---YYLDEA---TGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 202 al~~~l~~l~~~---~-gd~Vlv~~p~y~~~~~~~~~~-g~~~~~---~~~~~~---~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
|+..+++....- . ..+|+...-+|.+........ |-.... .+..+. -.| .|.+.+++.++.....+.+
T Consensus 153 Ave~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~~~ 231 (459)
T PRK11522 153 SVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-GNIEAMRTALSECKKTGDD 231 (459)
T ss_pred HHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-CCHHHHHHHHHHhhccCCc
Confidence 999998875421 1 346888888888765443332 211110 111110 011 2678888888654332334
Q ss_pred eeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCC
Q 013892 271 VRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS 349 (434)
Q Consensus 271 ~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~S 349 (434)
+.+|++.-...-.|.+. +.+.++++.++|++||+++|+||++.++...+. +..+ ...+ ..|| ++ +|+
T Consensus 232 iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~--~~a~----e~~g-v~PD--iv---t~g 299 (459)
T PRK11522 232 VAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGK--MFAC----EHEN-VQPD--IL---CLA 299 (459)
T ss_pred EEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccch--hhhh----hccC-CCCC--EE---Eec
Confidence 55555554455567754 667899999999999999999999987432222 2111 1111 2366 22 789
Q ss_pred CCCCCCCC-ceeEEEEEecCCHHHHHHHHH---HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 350 KGYYGECG-KRGGYMEVTGFSAEVREQIYK---VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 350 K~~~g~~G-~R~G~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
|.++ .| +.+|.+++ .+++.+.+.. ....+...++++.+++.+.|+--+. ++..++.++.-+.+.+.|++.
T Consensus 300 K~lg--gG~~Pigav~~---~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~-~~l~~~~~~~g~~l~~~L~~l 373 (459)
T PRK11522 300 KALG--GGVMPIGATIA---TEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLE-QNLPAQAEQKGDYLLDGFRQL 373 (459)
T ss_pred hhhh--CCCccceeEEE---cHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHH
Confidence 9994 47 68999987 7888876642 1223445577777766666653211 246677777777788888776
Q ss_pred HH
Q 013892 426 AK 427 (434)
Q Consensus 426 ~~ 427 (434)
..
T Consensus 374 ~~ 375 (459)
T PRK11522 374 AR 375 (459)
T ss_pred HH
Confidence 54
No 286
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.42 E-value=8.3e-12 Score=123.98 Aligned_cols=249 Identities=12% Similarity=0.085 Sum_probs=159.3
Q ss_pred cccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCC-------cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCC-hHHHH
Q 013892 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHS-------QGIKGLRDTIAAGIEARDGFPADPNDIFLTDG-ASPAV 203 (434)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~-------~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G-~~~al 203 (434)
+|+.+|...|+.|++++.+.+.+..+.+...|... .-+.+.|+.+++++ |. -++++|++|+| +|+++
T Consensus 2 ~~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~----~~-~~~~~vvf~~gs~T~a~ 76 (355)
T cd00611 2 NFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELL----NI-PDNYKVLFLQGGATGQF 76 (355)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CC-CCCceEEEEcCCchHHH
Confidence 46667778999999999888754322123333333 22456677777776 42 24678999988 99999
Q ss_pred HHHHHHHhcC---CCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCC-HHHHHHHHHHHHhcCCCeeEEEEecC
Q 013892 204 HMMMQLLIRS---ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLE-TSEVKKQLEAAKAKGITVRALVVINP 279 (434)
Q Consensus 204 ~~~l~~l~~~---~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~l~~~~~~g~~~~~i~l~~p 279 (434)
..++..+. . ++|.|++ .+....+...++..|++++.++.+++.+|+ + .+..+..+++ ++++|.+++-
T Consensus 77 ~~~~~~l~-~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~-~~~~~~~~~~~~------~~~lV~~~h~ 147 (355)
T cd00611 77 AAVPLNLL-GDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYT-KIPDVETWDLAP------DAAYVHYCSN 147 (355)
T ss_pred HHHHHhcC-CCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCC-CCCCHhhcCCCC------CCCEEEEeCC
Confidence 99999997 4 4444443 222223344778889999999876443332 2 2222222333 7899999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce
Q 013892 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (434)
Q Consensus 280 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R 359 (434)
.|.||..++ ++++.+|+++++|.+..-... ...+.+ + + +.+.|-.|.| |.+|
T Consensus 148 ~t~tG~~~~--------~i~~~~g~~~~VDa~qs~g~~-----~idv~~----~-----~---~~~ss~~K~l-GP~G-- 199 (355)
T cd00611 148 ETIHGVEFD--------EVPDTGGVPLVADMSSNILSR-----PIDVSK----F-----G---VIYAGAQKNL-GPAG-- 199 (355)
T ss_pred cccccEEcc--------eecccCCCeEEEEccccccCC-----CCCHHH----h-----C---EEEeeccccc-CCCc--
Confidence 999999743 344459999999998874221 112211 1 2 3556679987 7777
Q ss_pred eEEEEEecCCHHHHHHHHHH-----------hh--cccCCchHHHHHHHHHcCC--CC-CChHHHHHHHHHHHHHHHHHH
Q 013892 360 GGYMEVTGFSAEVREQIYKV-----------AS--VNLCSNISGQILASLVMSP--PK-VGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 360 ~G~~~~~~~~~~~~~~l~~~-----------~~--~~~~~~~~~q~~~~~~l~~--~~-~~~~~~~~~~~~r~~l~~~L~ 423 (434)
+|.+.+ .+++.+++... .. ....|+..+.+++...++- .. .++...+++++..+.+++.|+
T Consensus 200 ~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~ 276 (355)
T cd00611 200 VTVVIV---RKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTID 276 (355)
T ss_pred eEEEEE---CHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 566665 77777664321 01 1345666666666665553 12 356777888888888888888
Q ss_pred HH
Q 013892 424 RR 425 (434)
Q Consensus 424 ~~ 425 (434)
++
T Consensus 277 ~~ 278 (355)
T cd00611 277 NS 278 (355)
T ss_pred hC
Confidence 76
No 287
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.41 E-value=4.3e-11 Score=117.55 Aligned_cols=262 Identities=17% Similarity=0.139 Sum_probs=178.9
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+.-+ -..-+|.|.+++.+.+.+. ..|+.+. ++.-.+|+.+.++.+ ..+.|-+++.+|+
T Consensus 52 Gn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G-----~~fg~Pt---e~Ei~~Aell~~~~p---~~e~vrfvnSGTE 120 (432)
T COG0001 52 GNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERG-----LSFGAPT---ELEVELAELLIERVP---SIEKVRFVNSGTE 120 (432)
T ss_pred CCEeeehhccCcccccCCCCHHHHHHHHHHHHhc-----CCCCCCC---HHHHHHHHHHHHhcC---cccEEEEecchhH
Confidence 3446666554 2245788999999999874 3355543 455566666666544 4478999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHH-cC--Ce-----------------EEEEecCCCCCCCCCHHHHHHH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIAL-HG--GT-----------------LVPYYLDEATGWGLETSEVKKQ 260 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~-~g--~~-----------------~~~~~~~~~~~~~~d~~~l~~~ 260 (434)
|...+++.... ...|+|+..+-||..+.+.+.. .| .. ++.+|. -|++.++++
T Consensus 121 AtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~~al~~~ 193 (432)
T COG0001 121 ATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDLEALEEA 193 (432)
T ss_pred HHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-------CCHHHHHHH
Confidence 99998887531 2458999999999987776544 22 11 122222 189999999
Q ss_pred HHHHHhcCCCeeEEEEe-cCCCCCccCCCH-HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCC
Q 013892 261 LEAAKAKGITVRALVVI-NPGNPTGQVLAE-ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~-~p~NPtG~~~~~-~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~ 338 (434)
+++. |.++-+|++. -++| .|.+.+. +.+++|.++|+++|.++|.||+..+|...-.+ ...... ..|
T Consensus 194 ~~~~---g~~IAaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gG-aq~~~g-------i~P 261 (432)
T COG0001 194 FEEY---GDDIAAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGG-AQGYYG-------VEP 261 (432)
T ss_pred HHHc---CCcEEEEEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcc-cccccC-------cCc
Confidence 9874 2256555555 3477 6776555 57999999999999999999999987655221 222222 236
Q ss_pred CceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh----hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHH
Q 013892 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA----SVNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (434)
Q Consensus 339 ~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 414 (434)
| +.+|.|... -|+.+|.+-. ..++++++.-.. ..+++.+++...+....++.-...+..+++..+.
T Consensus 262 D-----lttlGKiIG--GGlP~ga~gG---r~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~ 331 (432)
T COG0001 262 D-----LTTLGKIIG--GGLPIGAFGG---RAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDAL 331 (432)
T ss_pred c-----hhhhhhhhc--CCcceeeecc---HHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 6 348899995 5999999855 889999875442 2455677777777766665432222368888888
Q ss_pred HHHHHHHHHHHHHH
Q 013892 415 RDGILSSLARRAKA 428 (434)
Q Consensus 415 r~~l~~~L~~~~~~ 428 (434)
-++|.+.|++....
T Consensus 332 ~~~L~~gl~~~~~~ 345 (432)
T COG0001 332 GERLAEGLRAAAER 345 (432)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888887654
No 288
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=5.7e-11 Score=121.11 Aligned_cols=275 Identities=12% Similarity=0.073 Sum_probs=159.4
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+||+..+ -..-++.+.+++.+.+.+........|. .+....+|+.+.+.... -..+.+++++++++
T Consensus 53 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~lAe~L~~~~p~-~~~~~v~f~~SGsE 126 (441)
T PRK05769 53 GNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFY-----YEPAVELAERLVEIAPG-GFEKKVFFTNSGTE 126 (441)
T ss_pred CCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccC-----CHHHHHHHHHHHHhCCC-CCCCEEEECCchHH
Confidence 3446776555 2345688999999988764210011121 23344555555443221 11368999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHH-cCCe-------------EEEEecCCC--CCCC-CC--------HH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIAL-HGGT-------------LVPYYLDEA--TGWG-LE--------TS 255 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~-~g~~-------------~~~~~~~~~--~~~~-~d--------~~ 255 (434)
|+..+++.... ...++|+...-+|.+....... .|.. +..++.... ..|+ -+ ++
T Consensus 127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (441)
T PRK05769 127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD 206 (441)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence 99999886542 2346788888888876543322 2211 122222110 0011 11 22
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~ 334 (434)
.+++.+-+....+.++.+|++.-.+.-.|... +.+.+++|.++|++||+++|+||++.++...+. ...+.. ++
T Consensus 207 ~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~--~~a~~~----~g 280 (441)
T PRK05769 207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGK--MFAIEH----FG 280 (441)
T ss_pred HHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc--eehhhc----cC
Confidence 24432211100122455555543355567654 577899999999999999999999998544432 222111 11
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 414 (434)
..+| ++ +|||.+ | .|+++|++++ ++++++.+......+...++++++++...|+--+. ..+++.++.
T Consensus 281 -v~pD--iv---t~~K~l-~-~G~p~gav~~---~~~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~--~~~~~~~~~ 347 (441)
T PRK05769 281 -VEPD--II---TLAKAI-A-GGLPLGAVIG---RAELMFLPPGSHANTFGGNPVAAAAALATLEELEE--GLLENAQKL 347 (441)
T ss_pred -CCCC--EE---EEcccc-c-CCcccEEEEE---ehhhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 2256 23 589999 4 5899999977 77776544323333445688888888877754322 455666666
Q ss_pred HHHHHHHHHHHH
Q 013892 415 RDGILSSLARRA 426 (434)
Q Consensus 415 r~~l~~~L~~~~ 426 (434)
-+.+.+.|++..
T Consensus 348 g~~l~~~L~~l~ 359 (441)
T PRK05769 348 GEYLRKELKELK 359 (441)
T ss_pred HHHHHHHHHHHH
Confidence 777777777654
No 289
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.41 E-value=1.5e-11 Score=117.26 Aligned_cols=256 Identities=13% Similarity=0.085 Sum_probs=173.8
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcc----hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc
Q 013892 137 QGLFSADSIERAWQILDQIPGRATGAYSHSQG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (434)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G----~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~ 212 (434)
+..-.|.|.+++.+.++..+. +.++-....| ...|.+.+|++..+ +..+++++.- -|.+..+..|.+
T Consensus 183 gms~Hp~V~~A~~~tl~~hG~-GAGGTRNIsG~s~~hv~LE~eLA~LHqK-------~aALlFsSCf-VANDstLftLak 253 (570)
T KOG1360|consen 183 GMSRHPEVLDAMHDTLDRHGA-GAGGTRNISGHSKHHVRLEAELADLHQK-------EAALLFSSCF-VANDSTLFTLAK 253 (570)
T ss_pred cccCChHHHHHHHHHHHHcCC-CcCCccccCCCCchhhhHHHHHHHHhcC-------cceeeeeeee-eccchHHHHHHH
Confidence 334578899999999988754 3444333444 44667777776522 2234444322 222222223221
Q ss_pred -CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHH
Q 013892 213 -SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (434)
Q Consensus 213 -~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~ 291 (434)
-||-+|+-.+-.+......++..++.-.-+.. -|++.|++.|+..... .+|.|-+...+..+|.+-+
T Consensus 254 ~lpgcei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL~~~~~s--vPKivAFEtVhSM~Gavcp--- 321 (570)
T KOG1360|consen 254 KLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLLQSSPKS--VPKIVAFETVHSMDGAVCP--- 321 (570)
T ss_pred HCCCcEEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHHHhCCCC--CCceEEEeeeeccCCCcCC---
Confidence 38888888889999999999988876655543 3899999999874332 6788889999999999999
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCccch-HHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSF-KKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~-~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~ 370 (434)
+++|++++++||.+-++||++.-..|++.+.-..- ..++ +.+. |+.+++.|.| |.-+||+.. ..
T Consensus 322 leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm-------~kvD-iIsGTLgKaf----GcVGGYIAa---t~ 386 (570)
T KOG1360|consen 322 LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVM-------HKVD-IISGTLGKAF----GCVGGYIAA---TR 386 (570)
T ss_pred HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcc-------hhhh-hcccchhhhc----ccccceehh---hh
Confidence 99999999999999999999999889864321100 0111 2222 7889999999 455799977 88
Q ss_pred HHHHHHHHHhh----cccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 013892 371 EVREQIYKVAS----VNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLARRAKAN 429 (434)
Q Consensus 371 ~~~~~l~~~~~----~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~ 429 (434)
.+++-++.+.. .++-||.. ..-+...++. .+++...++..+++.+++++.|.+++.-+
T Consensus 387 ~LvDmiRSyAaGFIFTTSLPP~v-l~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPV 450 (570)
T KOG1360|consen 387 KLVDMIRSYAAGFIFTTSLPPMV-LAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPV 450 (570)
T ss_pred hHHHHHHHhcCceEEecCCChHH-HHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999988865 22233332 2222223322 23456788889999999999998875433
No 290
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.40 E-value=3.1e-11 Score=114.73 Aligned_cols=214 Identities=18% Similarity=0.180 Sum_probs=149.9
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~ 244 (434)
...|.+.||..- .| -.-+.+.+++.|+..++..++ .+||.|+...--|.+ +...++..|.++..+..
T Consensus 64 ~~vlE~RiAaLE---GG-----~aa~a~aSG~AA~~~ai~~la-~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~ 134 (426)
T COG2873 64 TDVLEERIAALE---GG-----VAALAVASGQAAITYAILNLA-GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP 134 (426)
T ss_pred HHHHHHHHHHhh---cc-----hhhhhhccchHHHHHHHHHhc-cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCC
Confidence 455666666653 12 124556677889999998988 799999988876664 44556788999999863
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
.|++.++++|++ ++|+|++..-.||-+.+++ +++|.++|+++|+.+|+|..+..-++-.+
T Consensus 135 -------~d~~~~~~aI~~------nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl~rP---- 194 (426)
T COG2873 135 -------DDPENFEAAIDE------NTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYLCRP---- 194 (426)
T ss_pred -------CCHHHHHHHhCc------ccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcceecch----
Confidence 379999999998 8999999999999999999 99999999999999999998876322211
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHH---------------------H---------
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR---------------------E--------- 374 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~---------------------~--------- 374 (434)
+ +.+ -| |+++|+||...| .|--+|=+++-+++-++. +
T Consensus 195 -~-----~hG---AD---IVvHS~TK~igG-hGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~ 261 (426)
T COG2873 195 -I-----EHG---AD---IVVHSATKYIGG-HGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFII 261 (426)
T ss_pred -h-----hcC---CC---EEEEeecccccC-CccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHH
Confidence 1 111 24 899999998855 788777776644332222 1
Q ss_pred --HHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 375 --QIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 375 --~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+..-++....+.+++.......- -+.+.-+.++..++...+.+.|+.+.+
T Consensus 262 ~~r~~~lRDlGa~lsPfnAfl~lqG---lETL~LRmerH~~NA~~vA~~L~~Hpk 313 (426)
T COG2873 262 KARVQLLRDLGATLSPFNAFLLLQG---LETLSLRMERHCENALKVAEFLENHPK 313 (426)
T ss_pred HHHHHHHHhcccccCcHHHHHHHhc---hhhhHHHHHHHHHhHHHHHHHHhcCCC
Confidence 01111223344445444433322 244556678888888889888887643
No 291
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.39 E-value=8.4e-11 Score=120.40 Aligned_cols=269 Identities=14% Similarity=0.102 Sum_probs=166.5
Q ss_pred CCCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
+....||+..+ -..-+|.+.+++.+.++... .|.. ..+....+|+.+.+... ..+.+.++++++
T Consensus 97 dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~-----~~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGs 165 (474)
T PLN02482 97 DGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGT-----SFGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGT 165 (474)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHhhCC-----CCCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChH
Confidence 45557787555 23457889999999988642 1211 12344556666655432 247899999999
Q ss_pred HHHHHHHHHHhcC-CCCEEEEcCCCChhHHHHHHH-c--CCeEE------EEecC--CC---CCCCCCHHHHHHHHHHHH
Q 013892 201 PAVHMMMQLLIRS-ENDGILCPIPQYPLYSASIAL-H--GGTLV------PYYLD--EA---TGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 201 ~al~~~l~~l~~~-~gd~Vlv~~p~y~~~~~~~~~-~--g~~~~------~~~~~--~~---~~~~~d~~~l~~~l~~~~ 265 (434)
+|+..+++....- ..++|+...-+|.++.+.+.. . |.... .++.. .+ -.| -|++.+++.++..
T Consensus 166 EA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~- 243 (474)
T PLN02482 166 EACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEAN- 243 (474)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhC-
Confidence 9999998876422 346888888888886543211 1 10000 00000 00 011 1788898888642
Q ss_pred hcCCCeeEEEEecCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEE
Q 013892 266 AKGITVRALVVINPGNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVS 344 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~ 344 (434)
+.++.+|++.-...-.|.+.+ .+.|++|.++|++||+++|+||++.++ ..+. ... ...++ ..|| +
T Consensus 244 --~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~--~ga----~~~~g-v~PD--i-- 309 (474)
T PLN02482 244 --KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAY--GGA----QEYFG-ITPD--L-- 309 (474)
T ss_pred --CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCc--chH----hHHhC-CCCC--E--
Confidence 124555554433555677655 678999999999999999999999876 3332 111 11122 2366 2
Q ss_pred EecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH----hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHH
Q 013892 345 FQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILS 420 (434)
Q Consensus 345 i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 420 (434)
-+|+|.++ .|+.+|.+++ .+++++.+... ...+.+.++++..++...|+--+. ++.+++..+.-+.+.+
T Consensus 310 -~t~gK~lg--gG~Pigav~g---~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~-~~~~~~~~~~g~~l~~ 382 (474)
T PLN02482 310 -TTLGKVIG--GGLPVGAYGG---RREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ-PGTYEYLDKITKKLIQ 382 (474)
T ss_pred -EEecchhh--CCCceEEEEE---cHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc-cCHHHHHHHHHHHHHH
Confidence 37899994 5899999976 88998887532 223334567776666665543211 2467777777778888
Q ss_pred HHHHHHHH
Q 013892 421 SLARRAKA 428 (434)
Q Consensus 421 ~L~~~~~~ 428 (434)
.|++....
T Consensus 383 ~L~~l~~~ 390 (474)
T PLN02482 383 GILEAGKK 390 (474)
T ss_pred HHHHHHHh
Confidence 88776543
No 292
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.37 E-value=2e-10 Score=116.18 Aligned_cols=163 Identities=10% Similarity=0.030 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHHHHhc-----
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMMQLLIR----- 212 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~l~~l~~----- 212 (434)
+.+.+.+.+...+..... .+.......++.+.+.+++.+.+|.+-..+++.. |+|+|+++.+++.....
T Consensus 53 ~~p~~~~~~~~~l~~~~~----np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~ 128 (431)
T TIGR01788 53 MEPEARKLMDETINKNMI----DKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKR 128 (431)
T ss_pred CCHHHHHHHHHHHhcCCC----CcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHH
Confidence 355677777777764322 1111222347777888888877775311135544 89999999888765420
Q ss_pred --CC-----CCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 213 --SE-----NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 213 --~~-----gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
.. +..|+++.-.|.++...++..|++++.+++++ +++.+|+++|+++|++ ++.+|+++..+|.||.
T Consensus 129 ~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~------~t~lV~~t~g~t~tG~ 201 (431)
T TIGR01788 129 MEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDE------NTIGVVCILGTTYTGE 201 (431)
T ss_pred HHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhh------CCeEEEEEeCCCCCcc
Confidence 01 23799999999999999999999999999976 3457999999999987 7889999999999999
Q ss_pred CCCHHHHHHHHHHHHHc------CCEEEEccCCCCCc
Q 013892 286 VLAEENQRAIVDFCKKE------GLVLLADEVYQENV 316 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~------~~~li~Deay~~~~ 316 (434)
+-| +++|.++|+++ |+++++|.+|+++.
T Consensus 202 idp---i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~ 235 (431)
T TIGR01788 202 YED---VKALNDALDEYNAKTGWDIPIHVDAASGGFI 235 (431)
T ss_pred cCC---HHHHHHHHHHHHhhhCCCceEEEecccHHHH
Confidence 999 89999999999 99999999999744
No 293
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.37 E-value=5.1e-11 Score=109.90 Aligned_cols=237 Identities=16% Similarity=0.181 Sum_probs=155.2
Q ss_pred CCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh-HHH--HHHHcCCe
Q 013892 162 AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL-YSA--SIALHGGT 238 (434)
Q Consensus 162 ~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~-~~~--~~~~~g~~ 238 (434)
-|+...-...|.+.+|+.+ | .+..+++++|....+-.++ ..|..+|.+|++.+-+|-- |.+ +....|+.
T Consensus 51 VyGeD~tt~rLE~~vA~l~----G---KEAgLFv~SGTmgNllaIm-~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~ 122 (384)
T KOG1368|consen 51 VYGEDPTTNRLEQRVAELF----G---KEAGLFVPSGTMGNLLAIM-VHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVH 122 (384)
T ss_pred cccCCccHHHHHHHHHHHh----C---ccceeeecccccccHHHHH-HHhcCCCceEEeccchheeehhccChhhhccce
Confidence 3555444688999999987 3 2335777777666555554 4443699999999987743 332 33445777
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHH--hcCCCeeEEEEecCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 239 LVPYYLDEATGWGLETSEVKKQLEAAK--AKGITVRALVVINPGNPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 239 ~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~g~~~~~i~l~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
+.++...++ -.++++++++++.... =-.+.+++|.+.|-+|-+| .++|.+++++|.+||+++|+.+..|.+-...
T Consensus 123 ~~tv~~e~d--gtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~N 200 (384)
T KOG1368|consen 123 VRTVKNEND--GTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFN 200 (384)
T ss_pred eEeeeeCCC--CeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhh
Confidence 777765544 3789999999998422 0135689999999987777 9999999999999999999999999986543
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~ 394 (434)
.-..- -.+++++...++ . |.+ .|||++ |..+|.+++ +++++++.-..++. ...+.-..+..++
T Consensus 201 Aavas--gV~vk~i~~~fD----S---Vsi-CLSKgl----gAPVGSViV--G~k~FI~kA~~~RKalGGGmRQsGvLaa 264 (384)
T KOG1368|consen 201 AAVAS--GVPVKKICSAFD----S---VSI-CLSKGL----GAPVGSVIV--GSKDFIDKARHFRKALGGGMRQSGVLAA 264 (384)
T ss_pred HHHHc--CCCHHHHHHhhh----h---hhh-hhhccC----CCCcccEEE--ccHHHHHHHHHHHHHhcCchhHHHHHHH
Confidence 22211 345555554333 2 222 689987 678999875 49999988776655 3333333343333
Q ss_pred HHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
..++.-.+.. ..+..-.++.+.+.+.++..
T Consensus 265 aaLval~~~~-~~L~~dHk~A~~lAe~~~~~ 294 (384)
T KOG1368|consen 265 AALVALDENV-PLLRADHKRAKELAEYINTP 294 (384)
T ss_pred HHHHHhhcch-HHHHHHHHHHHHHHHHhccc
Confidence 3333322222 34445555666666666543
No 294
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.36 E-value=5.9e-11 Score=124.98 Aligned_cols=240 Identities=12% Similarity=0.111 Sum_probs=149.5
Q ss_pred CCCCCCCcchH-HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH-HHHcCC
Q 013892 160 TGAYSHSQGIK-GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS-IALHGG 237 (434)
Q Consensus 160 ~~~Y~~~~G~~-~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~-~~~~g~ 237 (434)
........|.. +..+.+|+. || .....++++|+|.++..++.+++ .+||.|+++..||-+.... +.+.|+
T Consensus 166 LddL~~~eG~i~eAq~~AA~~----fg---Ad~tyFlvNGTS~gn~a~i~a~~-~~Gd~VLvdRN~HKSv~hgaLiLsGa 237 (720)
T PRK13578 166 LGDLLIHEGAAKDAQKHAAKV----FN---ADKTYFVLNGTSASNKVVTNALL-TPGDLVLFDRNNHKSNHHGALIQAGA 237 (720)
T ss_pred CCCCCCCChHHHHHHHHHHHH----hC---CCceEEEeCChhHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHHcCC
Confidence 34444455544 344444444 34 23467899999999999999999 7999999999999998885 899999
Q ss_pred eEEEEecCCCCCCCC----CHH-----HHHHHHHHHH-h---cCCCeeEEEEecCCCCCccCCCHHHHHHHHHH-HHHcC
Q 013892 238 TLVPYYLDEATGWGL----ETS-----EVKKQLEAAK-A---KGITVRALVVINPGNPTGQVLAEENQRAIVDF-CKKEG 303 (434)
Q Consensus 238 ~~~~~~~~~~~~~~~----d~~-----~l~~~l~~~~-~---~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~~~ 303 (434)
+++++...- +.|++ +.+ .++++|++.. + ..++.++++|++|+. -|.+++ +++|+++ ++.++
T Consensus 238 ~PVYl~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~ 312 (720)
T PRK13578 238 TPVYLETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD 312 (720)
T ss_pred eEEEeeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC
Confidence 999987654 34554 544 4888887641 1 112358999999988 899998 8888888 57777
Q ss_pred CEEEEccCCCCCc-cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHH--------HH
Q 013892 304 LVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV--------RE 374 (434)
Q Consensus 304 ~~li~Deay~~~~-~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~--------~~ 374 (434)
.|++||||.... |.+. ...+....-.++...+. +++++|..|.+. ++.-+.++.+. +..+ .+
T Consensus 313 -~llvDEAhgah~~F~p~--~~~~p~~al~~GaD~p~--i~v~QStHKtL~---alTQaS~LHvk-~~~i~g~~~~v~~~ 383 (720)
T PRK13578 313 -YILFDSAWVGYEQFIPM--MADCSPLLLELNENDPG--IFVTQSVHKQQA---GFSQTSQIHKK-DNHIKGQARYCPHK 383 (720)
T ss_pred -cEEEeCcchhhhccCcc--cccCChhhhhcCCCCCC--eEEEEChhhcch---hhhhHhhhhcC-CcccccccccCCHH
Confidence 999999998742 2221 00011111223322233 699999999884 66656554332 2111 13
Q ss_pred HHHHHhhc--ccCCchHHHH---HHHHHcCCCCCChHHHHHHHHHHHHHHHHH
Q 013892 375 QIYKVASV--NLCSNISGQI---LASLVMSPPKVGDESYESYCAERDGILSSL 422 (434)
Q Consensus 375 ~l~~~~~~--~~~~~~~~q~---~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L 422 (434)
++.....+ +++|+-+-.+ ++..++.. ..+++..+.+.++...+++.|
T Consensus 384 r~~~al~m~qSTSPsY~LmASLDva~~~m~~-~~G~~l~~~~i~~a~~~R~~l 435 (720)
T PRK13578 384 RLNNAFMLHASTSPFYPLFAALDVNAKMHEG-ESGRRLWMECVKLGIEARKLI 435 (720)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHH
Confidence 44433331 2233332222 22233322 235566667777766676666
No 295
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.36 E-value=1.4e-10 Score=117.79 Aligned_cols=213 Identities=12% Similarity=0.123 Sum_probs=152.3
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc----CC-
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR----SE- 214 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~----~~- 214 (434)
+++.+.+.+...+..... ....|+ +..++.+.+..++.+.++.+ +.-.=.+|+|+|+++.+.+.+... ..
T Consensus 74 ~~~~a~~~~~~~~~~nl~-d~~~~p---~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~ 148 (460)
T COG0076 74 VPPVAAELLVSALNKNLG-DPDESP---AAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRAL 148 (460)
T ss_pred CHHHHHHHHHHHHhhcCC-CcccCh---hHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhh
Confidence 455555556666655322 233443 67889999999999988865 333568999999999887776531 01
Q ss_pred --C------CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC
Q 013892 215 --N------DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (434)
Q Consensus 215 --g------d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~ 286 (434)
+ ..|+++.-.|.++...++.+|.....++++.. ++.+|+++++++|++...+| +|+.+-++.+||.+
T Consensus 149 ~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~i 223 (460)
T COG0076 149 AESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSI 223 (460)
T ss_pred hcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCcc
Confidence 1 16999999999999999999999999998875 67999999999999842222 37777889999998
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 287 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
=+ +++|.++|+++++++++|.||++++..= ...... ++...+.+.-| .-++.|. |++=.-+||++.
T Consensus 224 Dd---i~~ia~ia~~~~i~lHVDAA~GG~~~pf----~~~~~~---~~f~l~~vdSI-t~d~HK~--g~aP~~~G~il~- 289 (460)
T COG0076 224 DD---IEELADIAEEYGIWLHVDAAFGGFLLPF----LEPDGR---WDFGLEGVDSI-TVDGHKY--GLAPIGCGVVLF- 289 (460)
T ss_pred CC---HHHHHHHHHHcCCcEEEEccccceeecc----cCccch---hhcCCCCceEE-EECcccc--cCCCCCceEEEE-
Confidence 55 9999999999999999999999976521 111011 11112333333 4588995 557788999976
Q ss_pred cCCH-HHHHHHH
Q 013892 367 GFSA-EVREQIY 377 (434)
Q Consensus 367 ~~~~-~~~~~l~ 377 (434)
.++ .+.+.+.
T Consensus 290 -rd~e~l~~~~~ 300 (460)
T COG0076 290 -RDEEALRRILI 300 (460)
T ss_pred -ECHHHhhhhhh
Confidence 466 4555544
No 296
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.35 E-value=7.9e-10 Score=100.85 Aligned_cols=225 Identities=17% Similarity=0.182 Sum_probs=166.2
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCC
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 248 (434)
+..+.+.+++|+ .-|.+-+|+|+.++=+.++.+++ .+||.|++....|....-+++..|+++..+|-....
T Consensus 63 I~~F~~dlaeFl--------g~D~~R~t~GARe~KfavMhal~-~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~P 133 (382)
T COG1103 63 IKDFLEDLAEFL--------GMDEVRVTAGAREAKFAVMHALC-KEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYP 133 (382)
T ss_pred HHHHHHHHHHHh--------CCceeeecccchhhHHHHHHHhc-cCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCC
Confidence 567778888887 35678999999999999999999 799999999999887777889999999999977777
Q ss_pred CCCCCHHHHHHHHHHHHhcC-CCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchH
Q 013892 249 GWGLETSEVKKQLEAAKAKG-ITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (434)
Q Consensus 249 ~~~~d~~~l~~~l~~~~~~g-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~ 327 (434)
.|.++++...+.|++..+++ ..+.+.++++|..--|...+ .++++++|+++|+.++...+|.-.... .+.+
T Consensus 134 ey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~gvPlllN~AYt~Grmp-----vs~k 205 (382)
T COG1103 134 EYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREYGVPLLLNCAYTVGRMP-----VSGK 205 (382)
T ss_pred ceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHcCCceEeecceeecccc-----cccc
Confidence 89999999999999887776 45777788899666777766 899999999999999999999863322 2221
Q ss_pred HHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh--------cccCCchHHHHHHHHHcC
Q 013892 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--------VNLCSNISGQILASLVMS 399 (434)
Q Consensus 328 ~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~q~~~~~~l~ 399 (434)
+++ .| ++++|=.|+++ +.-.+|.+.+ ..++.+.+.+... ..++...-+.-++..+-+
T Consensus 206 ----e~g---~D---FiVgSGHKsmA--As~PiGvl~~---~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmAS 270 (382)
T COG1103 206 ----EIG---AD---FIVGSGHKSMA--ASAPIGVLAM---SEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMAS 270 (382)
T ss_pred ----ccC---CC---EEEecCccchh--ccCCeeEEee---hhHHHHHHHhhcccccccceeeeecccccCchHHHHHhc
Confidence 222 34 77899999995 5678999987 8888887755421 112223444444444444
Q ss_pred CCCCChHHHHHHHHHH---HHHHHHHHHHH
Q 013892 400 PPKVGDESYESYCAER---DGILSSLARRA 426 (434)
Q Consensus 400 ~~~~~~~~~~~~~~~r---~~l~~~L~~~~ 426 (434)
-| +..+...+|.++. +.+.+.|+++.
T Consensus 271 fP-~V~eRVkrWdeEv~kaR~fv~elEkig 299 (382)
T COG1103 271 FP-HVVERVKRWDEEVEKARWFVAELEKIG 299 (382)
T ss_pred CH-HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33 2334445555443 34455565554
No 297
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.35 E-value=3e-10 Score=115.52 Aligned_cols=267 Identities=13% Similarity=0.042 Sum_probs=163.4
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|.+.+++.+++.... ...+ +. +....+++.+.+... ..+.+++++++++
T Consensus 52 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~-~~----~~~~~la~~l~~~~p---~~~~v~f~~sGse 120 (428)
T PRK12389 52 GNKYIDYLAAYGPIITGHAHPHITKAITEAAENGV---LYGT-PT----ELEIEFAKMLKEAIP---SLEKVRFVNSGTE 120 (428)
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHHhCC---ccCC-CC----HHHHHHHHHHHHhCC---CCcEEEEeCCHHH
Confidence 4446666444 23446889999999887642 1122 22 233445555544322 2468999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHH-cCCeEEE--------EecC-CCCCC---CCCHHHHHHHHHHHHhc
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIAL-HGGTLVP--------YYLD-EATGW---GLETSEVKKQLEAAKAK 267 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~--------~~~~-~~~~~---~~d~~~l~~~l~~~~~~ 267 (434)
|+..+++.... ....+|+...-+|.+....... .|..... ++.. ..+.. ..|++.+++.++..
T Consensus 121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 197 (428)
T PRK12389 121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKW--- 197 (428)
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhc---
Confidence 99999987642 2346788888888876543332 2211110 0000 00000 12688888888642
Q ss_pred CCCeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 268 GITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
+.++.+|++.-...-.|.+. +.+.+++|.++|+++|+++|+||++.++ ..+. . .....++ ..|| + -
T Consensus 198 ~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~---~---~a~~~~g-v~PD--i---v 264 (428)
T PRK12389 198 GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMY---G---GAQDLLG-VEPD--L---T 264 (428)
T ss_pred CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCc---c---hhhHHhC-CCCC--e---e
Confidence 12455555554455567655 5778999999999999999999999986 2211 1 0011111 3367 2 2
Q ss_pred cCCCCCCCCCCceeEEEEEecCCHHHHHHHHH----HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHH
Q 013892 347 SVSKGYYGECGKRGGYMEVTGFSAEVREQIYK----VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSL 422 (434)
Q Consensus 347 S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L 422 (434)
+|+|.++ .|+.+|.+++ ++++++.+.. ....+...++++.+++.+.|+--+. ++.+++.++.-+.+.+.|
T Consensus 265 t~gK~lg--gG~Pi~av~~---~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~-~~l~~~~~~~g~~l~~~L 338 (428)
T PRK12389 265 ALGKIIG--GGLPIGAYGG---RKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ-EGVYEKLDRLGAMLEEGI 338 (428)
T ss_pred eechhhc--CCCceeEEeE---HHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHH
Confidence 7899995 4899999976 8898888752 1223446777777777776653221 246667777777777777
Q ss_pred HHHH
Q 013892 423 ARRA 426 (434)
Q Consensus 423 ~~~~ 426 (434)
++..
T Consensus 339 ~~l~ 342 (428)
T PRK12389 339 LEAA 342 (428)
T ss_pred HHHH
Confidence 7654
No 298
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.35 E-value=2.4e-10 Score=117.16 Aligned_cols=255 Identities=13% Similarity=0.074 Sum_probs=143.5
Q ss_pred CCHHHHHHHHHHHHcCCCCC---CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEE---cCChHHHHHHHHHHHhcC
Q 013892 140 FSADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL---TDGASPAVHMMMQLLIRS 213 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~---t~G~~~al~~~l~~l~~~ 213 (434)
.++.+++++...+.+....+ ..-|+-..-+.++.+...+...+.++ ...+.+++ ...++.|...++.+|+ +
T Consensus 46 ~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~~~SG~~AN~av~~aL~-~ 122 (475)
T PLN03226 46 TSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQPLSGSPANFAVYTALL-Q 122 (475)
T ss_pred CCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecCcCchHHHHHHHHHHhC-C
Confidence 47778888888773322111 11232222233343322223333344 33444433 2556677777888888 7
Q ss_pred CCCEEEEcCC---CChhHHHHH---HHcCCe----EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC
Q 013892 214 ENDGILCPIP---QYPLYSASI---ALHGGT----LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (434)
Q Consensus 214 ~gd~Vlv~~p---~y~~~~~~~---~~~g~~----~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt 283 (434)
+||+|+..+. .|..+.... +..+.. +++|.++.+ +..+|+++|++.+++. ++++|++. .++ +
T Consensus 123 pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~-~g~iD~d~Le~~l~~~-----~pklIv~~-~S~-~ 194 (475)
T PLN03226 123 PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDES-TGLIDYDKLEKKAMLF-----RPKLIIAG-ASA-Y 194 (475)
T ss_pred CCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCC-CCCcCHHHHHHHHhhc-----CCeEEEEe-cCc-C
Confidence 9999998553 333322221 111222 224555543 4579999999998753 67766553 344 6
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEE
Q 013892 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM 363 (434)
Q Consensus 284 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~ 363 (434)
|...+ +++|.++|+++|+++++|+++...+..... ..+. +. +-| +++.|++|+| +|-++|++
T Consensus 195 s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~-~~~p------~~--~~D---iv~~t~hK~L---~GP~Gg~I 256 (475)
T PLN03226 195 PRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQE-AASP------FE--YCD---VVTTTTHKSL---RGPRGGMI 256 (475)
T ss_pred CCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCC-CCCC------CC--CCe---EEEecCcccc---cCCCceEE
Confidence 77777 778999999999999999999876665432 1110 00 123 7789999988 47778888
Q ss_pred EEecCCHHHH-----------HH---HHHHhh--cccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 364 EVTGFSAEVR-----------EQ---IYKVAS--VNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 364 ~~~~~~~~~~-----------~~---l~~~~~--~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+ +++.+ +. +..... ....++....+++...+..- ...++..++..++.+.+.+.|.+.
T Consensus 257 ~~---~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~ 333 (475)
T PLN03226 257 FF---RKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK 333 (475)
T ss_pred EE---chhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC
Confidence 76 55433 22 221111 22233333333333333321 112445677777777787777764
Q ss_pred H
Q 013892 426 A 426 (434)
Q Consensus 426 ~ 426 (434)
.
T Consensus 334 G 334 (475)
T PLN03226 334 G 334 (475)
T ss_pred C
Confidence 3
No 299
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.34 E-value=4.6e-10 Score=114.83 Aligned_cols=275 Identities=16% Similarity=0.099 Sum_probs=154.2
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|.+.+++.+.+.+... ....|.......+|.+.+++.. +...+.+++++++++
T Consensus 52 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~-~~~~~~~~~~~~~lae~L~~~~------p~~~~~v~f~~SGsE 124 (457)
T PRK05639 52 GNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQH-SMIGYTHSERAIRVAEKLAEIS------PIENPKVLFGLSGSD 124 (457)
T ss_pred CCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccc-cccCccCCHHHHHHHHHHHhhC------CCCcCEEEEeCchHH
Confidence 3446676554 334577899999988876421 1122333222334444444432 222368999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHH-cCC-------------eEEEEecCCCC--CCC----CCHHH----
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIAL-HGG-------------TLVPYYLDEAT--GWG----LETSE---- 256 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~~~~~~~~--~~~----~d~~~---- 256 (434)
|+..+++.... ....+|+....+|.+....... .|. .++.+|..... .|. -+.++
T Consensus 125 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 204 (457)
T PRK05639 125 AVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINR 204 (457)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHH
Confidence 99999887642 2346788888888875543222 221 12222221100 011 02322
Q ss_pred ----HHHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHh
Q 013892 257 ----VKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSR 331 (434)
Q Consensus 257 ----l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~ 331 (434)
+++.+......+.++.+|++.-.+.-.|.+ .+.+.+++|.++|++||+++|+||++.++...+. .... .
T Consensus 205 ~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~--~~a~----~ 278 (457)
T PRK05639 205 FLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGK--WFAS----E 278 (457)
T ss_pred HHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCch--HHHH----H
Confidence 333322110112256666655335556774 4678899999999999999999999998433322 1111 1
Q ss_pred hhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHH
Q 013892 332 SMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESY 411 (434)
Q Consensus 332 ~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 411 (434)
.++ ..|| ++ + |+|.++ .|..+|.+++ .+++++........+...++++.+++...|+--+. ++..+..
T Consensus 279 ~~g-v~PD--iv-~--~gK~l~--gG~pi~av~~---~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~-~~l~~~~ 346 (457)
T PRK05639 279 WFE-VKPD--LI-I--FGKGVA--SGMGLSGVIG---RKELMDLTSGSALLTPAANPVISAAAEATLEIIEE-ENLLKNA 346 (457)
T ss_pred hcC-CCCC--EE-E--echhhc--CCCcceeEEe---hHHHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHH-ccHHHHH
Confidence 111 2377 23 2 799995 4889999987 88888732111113445667666666665543111 2345555
Q ss_pred HHHHHHHHHHHHHHH
Q 013892 412 CAERDGILSSLARRA 426 (434)
Q Consensus 412 ~~~r~~l~~~L~~~~ 426 (434)
++.-+.+.+.|++..
T Consensus 347 ~~~g~~l~~~L~~l~ 361 (457)
T PRK05639 347 LKVGEFIKKRLLEMK 361 (457)
T ss_pred HHHHHHHHHHHHHHH
Confidence 556666777776653
No 300
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.34 E-value=7.5e-11 Score=128.64 Aligned_cols=237 Identities=17% Similarity=0.142 Sum_probs=161.5
Q ss_pred CCCCCCC---cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH----HHHHHHHHHHhcCCCC----EEEEcCCCChhH
Q 013892 160 TGAYSHS---QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS----PAVHMMMQLLIRSEND----GILCPIPQYPLY 228 (434)
Q Consensus 160 ~~~Y~~~---~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~----~al~~~l~~l~~~~gd----~Vlv~~p~y~~~ 228 (434)
.+-|.|. +|+.++...+.+++.+..|. ++|.++++++ +++.++++.+...+|| .|+++...|...
T Consensus 554 ~hp~~p~~~~~g~~~~~~~~r~~la~i~g~----~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn 629 (993)
T PLN02414 554 IHPFAPVDQAQGYQEMFEDLGDLLCEITGF----DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTN 629 (993)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHhCC----CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccC
Confidence 4555553 57776666666666666663 8999999998 8999999998743487 899999999998
Q ss_pred HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
...+...|++++.+++++++ .+|+++|+++++++. .++++|++++|+|-+|...+ +++|+++|+++|+++++
T Consensus 630 ~a~a~~~G~~vv~v~~d~~G--~vDle~L~~~i~~~~---~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~v 701 (993)
T PLN02414 630 PASAAMCGMKIVVVGTDAKG--NINIEELRKAAEAHK---DNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYM 701 (993)
T ss_pred HHHHHHCCCEEEEeccCCCC--CcCHHHHHHHHhccC---CCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEE
Confidence 88888899999999997543 799999999998421 16889999999999999877 99999999999999999
Q ss_pred ccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCC---CceeEEEEEecCCHHHHHHHHHH------
Q 013892 309 DEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC---GKRGGYMEVTGFSAEVREQIYKV------ 379 (434)
Q Consensus 309 Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~---G~R~G~~~~~~~~~~~~~~l~~~------ 379 (434)
|.++..-...-..+ .+++ -| +++.|..|+|++-. |--+|++.+ .+.++..+-..
T Consensus 702 DgAq~~a~~~l~~p--------~~~G---aD---~~~~s~HK~f~~P~G~GGPg~G~l~~---~~~L~p~lPg~~v~~~~ 764 (993)
T PLN02414 702 DGANMNAQVGLTSP--------GFIG---AD---VCHLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVPTG 764 (993)
T ss_pred EecCHHhccCcCCc--------cccC---CC---EEEecCCccCCcCcccCCCCeeeEEE---chhhcccCCCCccccCC
Confidence 99984321111100 1222 34 77788999885222 234788865 55554444211
Q ss_pred ------hhcccCC---chHHHH----HHHHHcC--CCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 380 ------ASVNLCS---NISGQI----LASLVMS--PPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 380 ------~~~~~~~---~~~~q~----~~~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
...+.|. ...+|. .+...+. ..+.+.+..+.-..+.+++.+.|++.
T Consensus 765 ~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~ 825 (993)
T PLN02414 765 GIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH 825 (993)
T ss_pred CcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 0011122 122222 2222222 22334555677777888888888764
No 301
>PRK05965 hypothetical protein; Provisional
Probab=99.33 E-value=3.3e-10 Score=116.09 Aligned_cols=271 Identities=16% Similarity=0.137 Sum_probs=159.2
Q ss_pred CCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCC-CCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 128 PSILDRSET-----QGLFSADSIERAWQILDQIPGRATGA-YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 128 p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~-Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...||+..+ -..-+|++++++.+++.+... ... |.. ..+.+..+|+.+.+.. +.+.+.+++++++++
T Consensus 46 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~--~~~~~~~---~~~~~~~lae~L~~~~--p~~~~~v~f~~sGSE 118 (459)
T PRK05965 46 HQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPY--ATGYFHF---GSEPAIRLAAKLAERA--PGSLNHVYFTLGGSD 118 (459)
T ss_pred CEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCC--ccccccc---CCHHHHHHHHHHHhhC--CCCcCEEEEeCChhH
Confidence 345666544 223478899999998886431 111 111 1223334555554432 223468999999999
Q ss_pred HHHHHHHHHhc-----C-C-CCEEEEcCCCChhHHHHH-HHcCCe------------EEEEecC--CCCCCCCCH-----
Q 013892 202 AVHMMMQLLIR-----S-E-NDGILCPIPQYPLYSASI-ALHGGT------------LVPYYLD--EATGWGLET----- 254 (434)
Q Consensus 202 al~~~l~~l~~-----~-~-gd~Vlv~~p~y~~~~~~~-~~~g~~------------~~~~~~~--~~~~~~~d~----- 254 (434)
|+..+++.... . + ..+|+...-+|.+..... ...|.. +..++.. ....+.-|.
T Consensus 119 Ave~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (459)
T PRK05965 119 AVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIA 198 (459)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHH
Confidence 99999987531 1 2 367998898888765322 221110 1112111 000111232
Q ss_pred ---HHHHHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHH
Q 013892 255 ---SEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVS 330 (434)
Q Consensus 255 ---~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~ 330 (434)
+.+++.++... ..++.+|++.-.+.-.|.+ .+.+.+++|.++|++||+++|+||+..+|...+. +..+.
T Consensus 199 ~~~~~l~~~i~~~~--~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~--~~a~~--- 271 (459)
T PRK05965 199 ASVAALRAKVAELG--ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGP--LFACE--- 271 (459)
T ss_pred HHHHHHHHHHHhcC--CCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCch--hhhHh---
Confidence 45666665321 1256666666445556764 5678899999999999999999999999544432 22211
Q ss_pred hhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHH--------HhhcccCCchHHHHHHHHHcCCC
Q 013892 331 RSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPP 401 (434)
Q Consensus 331 ~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~~~~~~l~~~ 401 (434)
.++ ..|| ++ +++|+++ -| +.+|.+++ .+++.+.+.. ....+.+.++++.+++.+.|+--
T Consensus 272 -~~g-v~PD--iv---~~gKgl~--gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l 339 (459)
T PRK05965 272 -AEG-VVPD--LM---TVAKGLT--SGYVPMGAVLM---SDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLY 339 (459)
T ss_pred -hcC-CCCC--eE---Eechhhc--cCCcceeEEEE---cHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHH
Confidence 111 3477 23 5699995 48 49999987 8899887752 12345567888877776666421
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 402 KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 402 ~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+. ++..++.++.-+.+.+.|++.
T Consensus 340 ~~-~~l~~~~~~~g~~l~~~l~~l 362 (459)
T PRK05965 340 HE-GGLLANGQKAGPRFAAGLDAL 362 (459)
T ss_pred Hh-ccHHHHHHHHHHHHHHHHHhh
Confidence 10 134555566666666666654
No 302
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.32 E-value=3.4e-10 Score=114.86 Aligned_cols=268 Identities=13% Similarity=0.065 Sum_probs=158.7
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|.+.+++.+.+.... ...+ +. +....+++.+.+..+ ...+.+++++++++
T Consensus 52 G~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~-~~----~~~~~la~~L~~~~~--~~~~~v~f~~SGsE 121 (433)
T PRK00615 52 GKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT---SYGL-TS----EQEILFAEELFSYLG--LEDHKIRFVSSGTE 121 (433)
T ss_pred CCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC---CCCC-CC----HHHHHHHHHHHHhCC--CCcCEEEEeCchHH
Confidence 4456776554 23457889999999887632 1122 12 233444444444322 22368999999999
Q ss_pred HHHHHHHHHhcC-CCCEEEEcCCCChhHHHH----HHHcCCeE----EEEecCC--CC--CC-CCCHHHHHHHHHHHHhc
Q 013892 202 AVHMMMQLLIRS-ENDGILCPIPQYPLYSAS----IALHGGTL----VPYYLDE--AT--GW-GLETSEVKKQLEAAKAK 267 (434)
Q Consensus 202 al~~~l~~l~~~-~gd~Vlv~~p~y~~~~~~----~~~~g~~~----~~~~~~~--~~--~~-~~d~~~l~~~l~~~~~~ 267 (434)
|+..+++....- ...+|+...-+|.++.+. +...+... ..+.... .. .+ ..|++.+++.++..
T Consensus 122 A~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 198 (433)
T PRK00615 122 ATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSL--- 198 (433)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhc---
Confidence 999999876422 336788888888875422 11111000 0000000 00 00 12688888888643
Q ss_pred CCCeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 268 GITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
+.++.+|++.-...-.|... +.+.+++|.++|++||+++|+||++.++ ..+. ... ...++ ..|| ++
T Consensus 199 ~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~--~ga----~~~~g-v~PD--i~--- 265 (433)
T PRK00615 199 GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQ--GGA----AAIYH-VKPD--IT--- 265 (433)
T ss_pred CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccH--hHH----HHhcC-CCCC--eE---
Confidence 12455555443344457655 4678999999999999999999999875 3332 111 11111 2366 22
Q ss_pred cCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH----hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHH
Q 013892 347 SVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSL 422 (434)
Q Consensus 347 S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L 422 (434)
+|+|+++ .|+.+|++++ ++++++.+... ...+...+++..+++...|+--+. +..+++.++.-+.+.+.|
T Consensus 266 ~~gK~lg--gG~p~~av~~---~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~-~~~~~~~~~~g~~l~~~l 339 (433)
T PRK00615 266 VYGKILG--GGLPAAAVVA---HKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE-QGFYTQLSTLEQNFLSPI 339 (433)
T ss_pred EEccccc--CCcceeeeee---cHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHH
Confidence 4899994 4888999987 88998887532 123334567777776666653221 235666666677776766
Q ss_pred HHHH
Q 013892 423 ARRA 426 (434)
Q Consensus 423 ~~~~ 426 (434)
++..
T Consensus 340 ~~~~ 343 (433)
T PRK00615 340 EEMI 343 (433)
T ss_pred HHHH
Confidence 6653
No 303
>PRK06062 hypothetical protein; Provisional
Probab=99.31 E-value=6.1e-10 Score=113.84 Aligned_cols=272 Identities=16% Similarity=0.181 Sum_probs=157.7
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+||+..+ -..-+|++++++.+.+..... ....|. .+.+..+|+.+.+... -..+.+++++++++
T Consensus 52 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~SGsE 123 (451)
T PRK06062 52 GRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCT-VAPAHA-----NDARSEAARLIAERAP--GDLSKVFFTNGGAD 123 (451)
T ss_pred CCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCC-cCCccC-----CHHHHHHHHHHHHhCC--CCCCEEEEcCChHH
Confidence 4456776554 234578899999998876421 011221 2334445555544322 22468999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHc-CCe-----------EEEEecCC--CCCCC--CC-------HHHH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GGT-----------LVPYYLDE--ATGWG--LE-------TSEV 257 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~-g~~-----------~~~~~~~~--~~~~~--~d-------~~~l 257 (434)
|+..+++.... ....+|+...-+|.+........ |.. +..++... ...|. -| ++.+
T Consensus 124 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 203 (451)
T PRK06062 124 ANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHL 203 (451)
T ss_pred HHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHH
Confidence 99999887642 23467888888888765433322 211 11111110 00111 12 5666
Q ss_pred HHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 258 KKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 258 ~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
++.++.. .+.++.+|++.-.+.-.|.+ .+.+.+++|.++|+++|+++|+||++.+|...+. ...+ ..++ .
T Consensus 204 e~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~--~~a~----~~~g-v 274 (451)
T PRK06062 204 ERVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGK--WFAI----EHFG-V 274 (451)
T ss_pred HHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcH--HHHH----HhcC-C
Confidence 7766431 11245555555334445766 4678899999999999999999999998432222 1111 1111 3
Q ss_pred CCCceEEEEecCCCCCCCCCCc-eeEEEEEecCCHHHHHHHHHH---hhcccCCchHHHHHHHHHcCCCCCChHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGK-RGGYMEVTGFSAEVREQIYKV---ASVNLCSNISGQILASLVMSPPKVGDESYESYC 412 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 412 (434)
.|| + -+|+|.++ .|. .+|.+++ .+++++.+... ...+.+.++++.+++.+.|+--+. ++..++..
T Consensus 275 ~PD--i---~t~gK~lg--gG~~Pigav~~---~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~-~~l~~~~~ 343 (451)
T PRK06062 275 VPD--L---ITFAKGVN--SGYVPLGGVAI---SEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEE-EGIVENAA 343 (451)
T ss_pred CCC--e---eeechhhh--cCCcCcEEEEE---cHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHH
Confidence 367 2 26899994 474 8999877 77888887532 223456677777777776643211 12444444
Q ss_pred HHH-HHHHHHHHHHH
Q 013892 413 AER-DGILSSLARRA 426 (434)
Q Consensus 413 ~~r-~~l~~~L~~~~ 426 (434)
+.- +.+.+.|++..
T Consensus 344 ~~G~~~l~~~L~~l~ 358 (451)
T PRK06062 344 RIGAEVLGPGLRELA 358 (451)
T ss_pred HHHHHHHHHHHHHHH
Confidence 443 35666666543
No 304
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.30 E-value=3.1e-10 Score=119.43 Aligned_cols=240 Identities=10% Similarity=0.034 Sum_probs=150.3
Q ss_pred CCCCCCCcchH-HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCe
Q 013892 160 TGAYSHSQGIK-GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT 238 (434)
Q Consensus 160 ~~~Y~~~~G~~-~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~ 238 (434)
........|.. +..+.+|+.+ | .....++++|+|.++..++.+++ .+||.|+++..||-+....+.+.|++
T Consensus 187 LddLl~~~G~i~eAe~~aA~~f----g---Ad~tyfvvNGTS~~n~av~~a~~-~~Gd~VLvdRN~HKSv~~aLilsga~ 258 (713)
T PRK15399 187 LGSLLDHTGPHLEAEEYIARTF----G---AEQSYIVTNGTSTSNKIVGMYAA-PAGSTLLIDRNCHKSLAHLLMMSDVV 258 (713)
T ss_pred CCCCCCCChHHHHHHHHHHHHh----C---CCcEEEEeCChHHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHcCCe
Confidence 34444445543 3444444443 4 23467899999999999999998 79999999999999999999999999
Q ss_pred EEEEecCCCCCCCC----CH-----HHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEE-EE
Q 013892 239 LVPYYLDEATGWGL----ET-----SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL-LA 308 (434)
Q Consensus 239 ~~~~~~~~~~~~~~----d~-----~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l-i~ 308 (434)
+++++..- +.|++ +. +.++++|++..+. .++++++|++|+. -|.+++ +++|++.| |+.+ ++
T Consensus 259 PVYl~P~~-n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilv 329 (713)
T PRK15399 259 PIWLKPTR-NALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHF 329 (713)
T ss_pred eEEecccc-cccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEE
Confidence 99987543 34443 44 8888888764321 2457899999966 899999 66677777 5655 69
Q ss_pred ccCCCCCc-cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh--cccC
Q 013892 309 DEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLC 385 (434)
Q Consensus 309 Deay~~~~-~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~~~ 385 (434)
||||.... |.+. +... ..+... ...|.-+++++|..|.+ +|+.-+.++.+... --.+++..... .+++
T Consensus 330 DEAhgah~~F~p~--~~~~-sam~~~--~~aD~~i~~tQStHKtL---~alTQaS~iHvk~~-vd~~~~n~a~~m~~STS 400 (713)
T PRK15399 330 DSAWVPYTHFHPI--YQGK-SGMSGE--RVPGKVIFETQSTHKML---AAFSQASLIHIKGE-YDEETFNEAFMMHTSTS 400 (713)
T ss_pred eccchhhhhcCcc--cCCc-ChhhCC--CCCCeeeeeeeehhccc---cccchheeeeecCC-CCHHHHHHHHHHHcCCC
Confidence 99998742 2221 1111 111111 12354567899999988 46666655444322 11234433332 1223
Q ss_pred CchHHHH---HHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 386 SNISGQI---LASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 386 ~~~~~q~---~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
|+-+-.+ ++..++.. ..+++..+...++...+++.|.+..
T Consensus 401 PsY~LmASLD~a~~~m~~-~~G~~l~~~~i~~a~~fR~~l~~~~ 443 (713)
T PRK15399 401 PSYPIVASVETAAAMLRG-NPGKRLINRSVERALHFRKEVQRLR 443 (713)
T ss_pred cHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 3333222 23333432 2355667777777777777776643
No 305
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.29 E-value=1e-09 Score=112.38 Aligned_cols=271 Identities=15% Similarity=0.160 Sum_probs=156.6
Q ss_pred CCCccccccc----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 127 HPSILDRSET----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 127 ~p~~l~~~~~----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
....||+..+ -..-+|.+++++.++++.... ....|. .+.+..+++.+.+..+ ...+.+++++++++|
T Consensus 71 G~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~sGseA 142 (459)
T PRK06082 71 GKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPF-SPRRFT-----NETAIECAEKLTEIAG--GELNRVLFAPGGTSA 142 (459)
T ss_pred CCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCC-ccCccC-----CHHHHHHHHHHHHhCC--CCCCEEEECCCcHHH
Confidence 3445665422 223678899999998876432 111122 2344455555544332 123689999999999
Q ss_pred HHHHHHHHhc-CCCCEEEEcCCCChhHHH-HHHHcCCe------------EEEEecCCC--CCCC-CC------HHHHHH
Q 013892 203 VHMMMQLLIR-SENDGILCPIPQYPLYSA-SIALHGGT------------LVPYYLDEA--TGWG-LE------TSEVKK 259 (434)
Q Consensus 203 l~~~l~~l~~-~~gd~Vlv~~p~y~~~~~-~~~~~g~~------------~~~~~~~~~--~~~~-~d------~~~l~~ 259 (434)
+..+++.... ....+|+...-+|.+... .+...|.. +..++.... ..|. .| ++.+++
T Consensus 143 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (459)
T PRK06082 143 IGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEY 222 (459)
T ss_pred HHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHH
Confidence 9999887642 134688888888876543 33222211 111211100 0011 01 244566
Q ss_pred HHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCC
Q 013892 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKD 339 (434)
Q Consensus 260 ~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~ 339 (434)
.++. .+ ++.+|++.-.++-.+.+.+.+.+++|.++|++||+++|+||+..++...+. +..+ ..++ ..||
T Consensus 223 ~i~~---~~-~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~--~fa~----e~~g-v~PD 291 (459)
T PRK06082 223 VIEK---EG-GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGE--WFTH----QAYG-IEPD 291 (459)
T ss_pred HHhc---CC-CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch--hhHh----HhhC-CCCC
Confidence 5542 12 455555543355445567888999999999999999999999998433332 2111 1111 3377
Q ss_pred ceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHH
Q 013892 340 ISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (434)
Q Consensus 340 ~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 417 (434)
++ +|+|+++ .| ..+|.++. .+++.+.+..... .+.+.++++.+++...|+--+. +...++..+.-+.
T Consensus 292 --iv---~~gKgl~--gG~~P~~av~~---~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~-~~l~~~~~~~g~~ 360 (459)
T PRK06082 292 --IL---CIGKGLG--GGLVPIAAMIT---KDKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQ-EGLLEKVKADSQF 360 (459)
T ss_pred --EE---Eeccccc--CCCCcceEEEE---cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHH
Confidence 23 3899995 37 58999876 6676544321111 3446677777776666643211 2466677777777
Q ss_pred HHHHHHHHHH
Q 013892 418 ILSSLARRAK 427 (434)
Q Consensus 418 l~~~L~~~~~ 427 (434)
+.+.|++...
T Consensus 361 l~~~L~~l~~ 370 (459)
T PRK06082 361 MRERLLEMKA 370 (459)
T ss_pred HHHHHHHHHh
Confidence 7777776544
No 306
>PRK12403 putative aminotransferase; Provisional
Probab=99.28 E-value=1.8e-09 Score=110.62 Aligned_cols=262 Identities=15% Similarity=0.109 Sum_probs=145.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc------
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------ 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~------ 212 (434)
.-+|.+++++.++++.... ...+ ..+..+....+++.+....+ ...+.+++++++++|+..+++....
T Consensus 70 h~hp~v~~A~~~q~~~~~~--~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AiklAr~~~~~~g 143 (460)
T PRK12403 70 YGRKDLAAAAARQMEQLPY--YNMF--FHTTHPAVIELSELLFSLLP--GHYSHAIYTNSGSEANEVLIRTVRRYWQVLG 143 (460)
T ss_pred CCCHHHHHHHHHHHHhCCC--eecc--cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhC
Confidence 3568899999999887432 1111 01122344445555444322 1236899999999999999988741
Q ss_pred CCCC-EEEEcCCCChhHHH-HHHHcCCe-----------EEEEecCC--CCCCCCC--------HHHHHHHHHHHHhcCC
Q 013892 213 SEND-GILCPIPQYPLYSA-SIALHGGT-----------LVPYYLDE--ATGWGLE--------TSEVKKQLEAAKAKGI 269 (434)
Q Consensus 213 ~~gd-~Vlv~~p~y~~~~~-~~~~~g~~-----------~~~~~~~~--~~~~~~d--------~~~l~~~l~~~~~~g~ 269 (434)
.+++ .|+...-+|.+... .+...|.. +..++... ...+.+. .+.+++.+.+. ...
T Consensus 144 ~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~ 221 (460)
T PRK12403 144 KPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL--GAE 221 (460)
T ss_pred CCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh--CCC
Confidence 1223 45555556665433 33332321 11121110 0001111 24455554321 112
Q ss_pred CeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecC
Q 013892 270 TVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV 348 (434)
Q Consensus 270 ~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~ 348 (434)
++.+|++.-.+.-.|.+ .+.+.+++|.++|++||+++|+||++.++...+. ...+ ..++ ..|| ++ +|
T Consensus 222 ~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~--~~a~----e~~g-v~PD--iv---~~ 289 (460)
T PRK12403 222 NVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGE--WFAH----EHFG-FEPD--TL---SI 289 (460)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch--hhhh----hhcC-CCCC--eE---EE
Confidence 45455554334445765 4677899999999999999999999988533332 2111 1111 2366 23 48
Q ss_pred CCCCCCCCCc-eeEEEEEecCCHHHHHHHHHH-----hhcccCCchHHHHHHHHHcCCCCCChHHHHHHH-HHHHHHHHH
Q 013892 349 SKGYYGECGK-RGGYMEVTGFSAEVREQIYKV-----ASVNLCSNISGQILASLVMSPPKVGDESYESYC-AERDGILSS 421 (434)
Q Consensus 349 SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~-~~r~~l~~~ 421 (434)
+|+++ -|. .+|.+++ .+++.+.+... ...+.+.++++.+++.+.|+--+. +...++.+ +.-+.+.+.
T Consensus 290 gK~lg--gG~~Piga~v~---~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~-~~l~~~~~~~~g~~l~~~ 363 (460)
T PRK12403 290 AKGLT--SGYVPMGGLVL---SKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRD-EGVVTRVKDDTGPYLQRC 363 (460)
T ss_pred ccccc--ccccceEEEEE---CHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHH
Confidence 99995 484 8998876 78888877531 223445777777777766643111 12445553 555666666
Q ss_pred HHHHH
Q 013892 422 LARRA 426 (434)
Q Consensus 422 L~~~~ 426 (434)
|++..
T Consensus 364 L~~l~ 368 (460)
T PRK12403 364 LREVF 368 (460)
T ss_pred HHHHH
Confidence 66543
No 307
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.28 E-value=1.3e-09 Score=112.64 Aligned_cols=272 Identities=14% Similarity=0.071 Sum_probs=159.1
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+||+..+ -..-+|++++++.+++..... ...+ ..+..+....+++.+.+... +.+.+.+++++++++
T Consensus 88 G~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~--~~~~--~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsE 162 (504)
T PLN02760 88 GKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPF--YHSF--WNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSE 162 (504)
T ss_pred CCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccc--eecc--cccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHH
Confidence 3446676553 235578899999999886431 1111 11233445556666544322 123357899999999
Q ss_pred HHHHHHHHHhc------CC-CCEEEEcCCCChhHHH-HHHHcCCe------------EEEEecCCCCCCC----------
Q 013892 202 AVHMMMQLLIR------SE-NDGILCPIPQYPLYSA-SIALHGGT------------LVPYYLDEATGWG---------- 251 (434)
Q Consensus 202 al~~~l~~l~~------~~-gd~Vlv~~p~y~~~~~-~~~~~g~~------------~~~~~~~~~~~~~---------- 251 (434)
|+..+++.... .+ ..+|+..+-+|.+... .+...|.. +..++.. ..|.
T Consensus 163 A~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~ 240 (504)
T PLN02760 163 ANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP--HYWRFHLPGETEEE 240 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC--cccccCCCCCcHHH
Confidence 99999987631 12 3678888888876543 22222321 1111111 0011
Q ss_pred ---CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchH
Q 013892 252 ---LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (434)
Q Consensus 252 ---~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~ 327 (434)
...++|++.+... ...++.+|++.-...-.|.+ .+.+.+++|.++|++||+++|+||++.+|...+. ....
T Consensus 241 ~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~--~~a~- 315 (504)
T PLN02760 241 FSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT--MFGC- 315 (504)
T ss_pred HHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch--hhHH-
Confidence 0123455555421 11145455544334445765 4678899999999999999999999988533332 2111
Q ss_pred HHHhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHH--------hhcccCCchHHHHHHHHHc
Q 013892 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV--------ASVNLCSNISGQILASLVM 398 (434)
Q Consensus 328 ~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l 398 (434)
..++ ..|| +-+|+|+++ .| +.+|.+++ ++++++.+... +..+.+.++++.+++...|
T Consensus 316 ---e~~g-v~PD-----ivtlgK~lg--gG~~PigAv~~---~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~L 381 (504)
T PLN02760 316 ---DKYN-IKPD-----LVSLAKALS--SAYMPIGAVLV---SPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEAL 381 (504)
T ss_pred ---HhcC-CCCc-----EEEeccccc--CCccccceEee---cHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHH
Confidence 1111 3367 347799994 36 48999877 88998887531 2344566788877777766
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 399 SPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 399 ~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+--+. ++..++.++.-+.+.+.|++.
T Consensus 382 e~i~~-~~l~~~~~~~g~~l~~~L~~l 407 (504)
T PLN02760 382 KIYKE-RNIPEHVNKIAPRFQDGIKAF 407 (504)
T ss_pred HHHHh-CCHHHHHHHHHHHHHHHHHHH
Confidence 53211 245666666667777777664
No 308
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.28 E-value=1.5e-10 Score=114.95 Aligned_cols=222 Identities=13% Similarity=0.119 Sum_probs=140.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC-CE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g-d~ 217 (434)
.-+|++++++.+++++... ....|. .....++.+.++++. + .+.+++++++++|+..+++......| ++
T Consensus 40 h~~p~v~~ai~~ql~~~~~-~~~~~~-~~~~~~la~~l~~~~----~----~~~v~~~~SGseA~e~Alklar~~~gr~~ 109 (364)
T PRK04013 40 HNHPEWVEEMSEQLEKLVV-AGPMFE-HEEKEEMLEELSKWV----N----YEYVYMGNSGTEAVEAALKFARLYTGRKE 109 (364)
T ss_pred CCCHHHHHHHHHHHHhcCC-ccCCcC-CHHHHHHHHHHHhhc----C----CCEEEEeCchHHHHHHHHHHHHHHhCCCE
Confidence 3467899999998887432 111233 222444555555543 2 35899999999999999988753345 89
Q ss_pred EEEcCCCChhHHHHHHHc-C-------CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC-CC
Q 013892 218 ILCPIPQYPLYSASIALH-G-------GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LA 288 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~-g-------~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~ 288 (434)
|+...-+|.+........ + ..+...... ...|. |.+.+++.+.+ ++.+|++...+...|.. .+
T Consensus 110 Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~-~~~~~-d~~~l~~~i~~------~~aAvivEpi~g~gG~~~~~ 181 (364)
T PRK04013 110 IIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFK-HIPFN-DVEAAKEAITK------ETAAVIFEPIQGEGGIVPAK 181 (364)
T ss_pred EEEECCccccCchhhccCCCCcccccCCCCCCCCcE-EecCC-CHHHHHHHhcC------CcEEEEEcCCcCCCCCcCCC
Confidence 999999888765433321 1 111000000 00122 67888887764 68888777666555654 46
Q ss_pred HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecC
Q 013892 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (434)
Q Consensus 289 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~ 368 (434)
.+.+++|.++|++||+++|+||+..++ ..+. +..+. .+ ...|| ++ +++|.++ .|+.+|.++.
T Consensus 182 ~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~--~~a~~----~~-gv~PD--iv---~~gK~lg--gG~P~~a~~~--- 243 (364)
T PRK04013 182 EEFVKTLRDLTEDVGALLIADEVQSGL-RTGK--FLAIE----HY-KVEPD--IV---TMGKGIG--NGVPVSLTLT--- 243 (364)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhcC-CCCc--hhHHH----hc-CCCCC--EE---Eeccccc--CCceeEEEEe---
Confidence 678999999999999999999999986 3332 22221 11 13467 23 5699995 4899999876
Q ss_pred CHHHHHHHHHHhhcccCCchHHHHHHHHHcC
Q 013892 369 SAEVREQIYKVASVNLCSNISGQILASLVMS 399 (434)
Q Consensus 369 ~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~ 399 (434)
..++.. .....+...++++.+++...|+
T Consensus 244 ~~~~~~---~~~~~T~~gnp~~~aaa~a~l~ 271 (364)
T PRK04013 244 NFDVER---GKHGSTFGGNPLACKAVAVTLR 271 (364)
T ss_pred cccccC---CCcCCCCCcCHHHHHHHHHHHH
Confidence 444311 1233455778888887777664
No 309
>PRK07482 hypothetical protein; Provisional
Probab=99.27 E-value=6.8e-10 Score=113.81 Aligned_cols=274 Identities=15% Similarity=0.042 Sum_probs=160.5
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|++++++.++++.... ...+. .-..+.+..+|+.+.+.. +.+.+.+++++++++
T Consensus 49 G~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~--~~~~~--~~~~~~~~~lAe~L~~~~--p~~~~~v~f~~sGSE 122 (461)
T PRK07482 49 GRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAY--YHTYV--GHGTEASITLSKRIIDRA--PAGMSKVYYGLSGSD 122 (461)
T ss_pred CCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCc--ccccc--ccCCHHHHHHHHHHHHhC--CCCcCEEEEeCchHH
Confidence 3446666555 234578899999999886421 11110 011234455555554432 223468999999999
Q ss_pred HHHHHHHHHhc------CC-CCEEEEcCCCChhHHHHHHHcCCe-------------EEEEecCCCCC---CCC------
Q 013892 202 AVHMMMQLLIR------SE-NDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATG---WGL------ 252 (434)
Q Consensus 202 al~~~l~~l~~------~~-gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~---~~~------ 252 (434)
|+..+++.... .+ ..+|+...-+|.+........... +..++...... ++.
T Consensus 123 Ave~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 202 (461)
T PRK07482 123 ANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFS 202 (461)
T ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHH
Confidence 99999987631 11 367888888888754332221110 11111110000 000
Q ss_pred --CHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHH
Q 013892 253 --ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (434)
Q Consensus 253 --d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~ 329 (434)
+++.+++.+... .+.++.+|++.-.+.-.|.+ .+.+.+++|.++|++||+++|+||+..+|...+. ...+.
T Consensus 203 ~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~--~~a~~-- 276 (461)
T PRK07482 203 AYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS--MFGSD-- 276 (461)
T ss_pred HHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcc--hhhHH--
Confidence 345666666421 11246555555334445766 5677999999999999999999999999644332 22211
Q ss_pred HhhhCCCCCCceEEEEecCCCCCCCCCCc-eeEEEEEecCCHHHHHHHHHH--------hhcccCCchHHHHHHHHHcCC
Q 013892 330 SRSMGYGEKDISLVSFQSVSKGYYGECGK-RGGYMEVTGFSAEVREQIYKV--------ASVNLCSNISGQILASLVMSP 400 (434)
Q Consensus 330 ~~~l~~~~~~~~~i~i~S~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~ 400 (434)
.+ ...|| ++ +++|+++ -|. .+|.+++ .+++.+.+... ...+...++++.+++.+.|+-
T Consensus 277 --~~-gv~PD--iv---~~gKgl~--gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~ 343 (461)
T PRK07482 277 --HY-GIEPD--LI---TVAKGLT--SAYAPLSGSIV---GEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDI 343 (461)
T ss_pred --hc-CCCCC--EE---EEccccc--cCccccceeee---cHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHH
Confidence 11 23477 23 4699995 375 8888876 78888777521 223556788888887777653
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 401 PKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 401 ~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
-+. +...+..++.-+.+.+.|++..
T Consensus 344 ~~~-~~l~~~~~~~g~~l~~~L~~l~ 368 (461)
T PRK07482 344 LER-ENLVGNAAEVGAYFRARLRAAF 368 (461)
T ss_pred HHh-CCHHHHHHHHHHHHHHHHHHHH
Confidence 111 2455566666666777776553
No 310
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.27 E-value=2.1e-10 Score=120.81 Aligned_cols=240 Identities=12% Similarity=0.065 Sum_probs=149.3
Q ss_pred CCCCCCCcchH-HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCe
Q 013892 160 TGAYSHSQGIK-GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT 238 (434)
Q Consensus 160 ~~~Y~~~~G~~-~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~ 238 (434)
........|.. +..+.+|+. || .....++++|+|.++..++.+++ .+||.|+++..||-+....+.+.|++
T Consensus 187 LddLl~~~G~i~eAe~~AA~~----fg---Ad~tyfvvNGTS~~n~av~~a~~-~~Gd~VLvdRN~HKSv~haLilsga~ 258 (714)
T PRK15400 187 LGSLLDHSGPHKEAEEYIARV----FN---ADRSYMVTNGTSTANKIVGMYSA-PAGSTVLIDRNCHKSLTHLMMMSDVT 258 (714)
T ss_pred CCCCCCCChHHHHHHHHHHHH----hC---CCcEEEEeCchHHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHcCCe
Confidence 44444455554 344444444 34 23467899999999999999998 79999999999999999999999999
Q ss_pred EEEEecCCCCCCCC----C-----HHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 013892 239 LVPYYLDEATGWGL----E-----TSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (434)
Q Consensus 239 ~~~~~~~~~~~~~~----d-----~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 309 (434)
+++++..- +.|++ + .+.++++|++..+. .++++++|++|+. -|.+++ +++|++.|+.++ |++|
T Consensus 259 PVYl~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvD 330 (714)
T PRK15400 259 PIYFRPTR-NAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFD 330 (714)
T ss_pred EEEecccc-cccCCccCCCccccCHHHHHHHHHhCccc-cCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEE
Confidence 99987654 34444 4 78889888764321 1344789999966 899999 788888887776 7899
Q ss_pred cCCCCCc-cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh--cccCC
Q 013892 310 EVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLCS 386 (434)
Q Consensus 310 eay~~~~-~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~~~~ 386 (434)
|||.... |.+. +... ..+. .+...++ -+++++|..|.+. |+.-+.++.+...-+ .+++..... .+++|
T Consensus 331 EAwgah~~F~p~--~~~~-sam~-~ga~~~~-~i~vtQStHKtL~---alTQaS~LHvkg~vd-~~~~n~a~~m~~STSP 401 (714)
T PRK15400 331 SAWVPYTNFSPI--YEGK-CGMS-GGRVEGK-VIYETQSTHKLLA---AFSQASMIHVKGDVN-EETFNEAYMMHTTTSP 401 (714)
T ss_pred ccchhhhccCcc--cCCc-Chhh-cCCCCCC-ceEEEEchhhccc---chhHHhHHHHcCCCC-HHHHHHHHHHHcCCCc
Confidence 9998742 2221 1101 1111 1111112 3689999999884 655554432221111 123333222 12233
Q ss_pred chHHHH---HHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 387 NISGQI---LASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 387 ~~~~q~---~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+-+-.+ ++..++.. ..+++..+...++...+++.|.+.
T Consensus 402 sY~l~ASLD~a~~~m~~-~~G~~l~~~~i~~a~~~R~~l~~~ 442 (714)
T PRK15400 402 HYGIVASTETAAAMMKG-NAGKRLINGSIERAIKFRKEIKRL 442 (714)
T ss_pred HHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHhC
Confidence 333222 23334432 234566677777777777776653
No 311
>PLN02880 tyrosine decarboxylase
Probab=99.27 E-value=7.3e-10 Score=114.14 Aligned_cols=191 Identities=12% Similarity=0.079 Sum_probs=141.0
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCCC-----CCEEEcCChHHHHHHHHHHHhc----C------CCCEEEEcCCCC
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADP-----NDIFLTDGASPAVHMMMQLLIR----S------ENDGILCPIPQY 225 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~l~~l~~----~------~gd~Vlv~~p~y 225 (434)
..|..+.+..++.+.+.+|+.+..|.+-.. ..-++|+|+++++..++.+... . +.-.|++++-.|
T Consensus 112 ~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH 191 (490)
T PLN02880 112 FSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTH 191 (490)
T ss_pred cccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCch
Confidence 344455567899999999999998865321 2467889999988776655421 0 122577888899
Q ss_pred hhHHHHHHHcCCe---EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc
Q 013892 226 PLYSASIALHGGT---LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (434)
Q Consensus 226 ~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~ 302 (434)
.....++..+|+. ++.+|.++++++.+|++.|+++|++..++|..+-+|+.+-..-.||.+-+ +++|.++|+++
T Consensus 192 ~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~ 268 (490)
T PLN02880 192 SALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSN 268 (490)
T ss_pred HHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHc
Confidence 9999999999984 78889887667899999999999987777766766777777889999988 99999999999
Q ss_pred CCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 303 ~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
|+|+++|.+|+++....+ .+...+..+. ..| -+..++.|.+. ...-.|.+.+
T Consensus 269 ~iwlHVDaA~gg~~~~~~----~~~~~l~gie--~aD---Sit~d~HKwl~--~P~~~g~llv 320 (490)
T PLN02880 269 GMWFHVDAAYAGSACICP----EYRHYIDGVE--EAD---SFNMNAHKWFL--TNFDCSLLWV 320 (490)
T ss_pred CCEEEEehhhHHHHHhCH----HHHHHhcCch--hcC---EEEECchhhcC--CCccEEEEEE
Confidence 999999999998644321 1222222221 123 45668999763 5677888775
No 312
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.27 E-value=1.2e-09 Score=111.40 Aligned_cols=260 Identities=13% Similarity=0.095 Sum_probs=150.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC-----
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS----- 213 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~----- 213 (434)
.-+|.+++++.+++++........+. .+....+|+.+.+.. +-..+.+++++++++|+..+++....-
T Consensus 62 h~~p~v~~ai~~ql~~l~~~~~~~~~-----~~~~~~la~~l~~~~--p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g 134 (442)
T PRK13360 62 HGRPEIVEAVRAQAGELDYAPAFQMG-----HPKAFELANRIAEIA--PGGLNHVFFTNSGSESVDTALKIALAYHRARG 134 (442)
T ss_pred CCCHHHHHHHHHHHHhCCCcccCCcC-----CHHHHHHHHHHHHhC--CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 44778999999888764210111111 233344555554432 112358999999999999998865410
Q ss_pred --CCCEEEEcCCCChhHHHHHH-HcCC------------eEEEEecCC---CCCCCC--------CHHHHHHHHHHHHhc
Q 013892 214 --ENDGILCPIPQYPLYSASIA-LHGG------------TLVPYYLDE---ATGWGL--------ETSEVKKQLEAAKAK 267 (434)
Q Consensus 214 --~gd~Vlv~~p~y~~~~~~~~-~~g~------------~~~~~~~~~---~~~~~~--------d~~~l~~~l~~~~~~ 267 (434)
...+|+...-+|.+...... ..|. .+..+|... ...|.. ..+.|++.++.. .
T Consensus 135 ~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~ 212 (442)
T PRK13360 135 EGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--D 212 (442)
T ss_pred CCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--C
Confidence 13579988888887643221 1110 111222210 011111 145666666531 1
Q ss_pred CCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 268 GITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
+.++.+|++.-.+.-.|.. .+.+.+++|.++|++||+++|+||++.++...+. ...+ ... ...|| + -
T Consensus 213 ~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~--~~a~----~~~-gv~PD--i---v 280 (442)
T PRK13360 213 ASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA--PFAA----QYF-GVTPD--L---L 280 (442)
T ss_pred CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--chhh----hhc-CCCCc--e---e
Confidence 1245455544335556765 4677899999999999999999999988533332 2111 111 12366 2 2
Q ss_pred cCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHH--------HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHH
Q 013892 347 SVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (434)
Q Consensus 347 S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 417 (434)
+|+|+++ .| +.+|.+++ ++++.+.+.. ....+...++++.+++...|+--+. +...++.++.-+.
T Consensus 281 t~gK~l~--gG~~P~gav~~---~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~-~~l~~~~~~~g~~ 354 (442)
T PRK13360 281 TCAKGLT--NGAIPMGAVFV---SSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER-EGLLTRAARLAPY 354 (442)
T ss_pred eeeeccc--cCccceEEEEE---cHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHH
Confidence 7899995 36 78998877 8888887643 1233445677777776666643211 1355666666667
Q ss_pred HHHHHHHH
Q 013892 418 ILSSLARR 425 (434)
Q Consensus 418 l~~~L~~~ 425 (434)
+.+.|++.
T Consensus 355 l~~~l~~l 362 (442)
T PRK13360 355 WEDALHSL 362 (442)
T ss_pred HHHHHHHh
Confidence 77777655
No 313
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.27 E-value=1.2e-09 Score=110.78 Aligned_cols=264 Identities=12% Similarity=0.073 Sum_probs=150.5
Q ss_pred CCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
...||+..+ -..-++.+.+++.+++++... ....+... +....+++.+.+..+ ...+.+++++++++|
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~-~~~~~~~~----~~~~~lae~L~~~~p--~~~~~v~f~~SGseA 112 (422)
T PRK05630 40 STVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSH-VMFGGLTH----EPAIKLTRKLLNLTD--NGLDHVFYSDSGSVS 112 (422)
T ss_pred CEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCC-cccCCcCC----HHHHHHHHHHHhhCC--CCcCEEEEeCCcHHH
Confidence 335565443 234477899999998886431 01111112 223444444443322 124689999999999
Q ss_pred HHHHHHHHhc------CC-CCEEEEcCCCChhHHHHHHHc-CC-------------eEEEEecCCCCCCCCCH-------
Q 013892 203 VHMMMQLLIR------SE-NDGILCPIPQYPLYSASIALH-GG-------------TLVPYYLDEATGWGLET------- 254 (434)
Q Consensus 203 l~~~l~~l~~------~~-gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~d~------- 254 (434)
+..+++.... .+ ..+|+...-+|.+....+... +. ....+|.... ...+.
T Consensus 113 ~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~ 190 (422)
T PRK05630 113 VEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYL 190 (422)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc--cCCChHHHHHHH
Confidence 9999887531 02 357898888888754332221 21 1112221110 01121
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEec-CCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhh
Q 013892 255 SEVKKQLEAAKAKGITVRALVVIN-PGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRS 332 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~-p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~ 332 (434)
+.+++.+.+ ++.+|++.- .+.-.|.. .+.+.+++|.++|++||+++|+||++.++...+. ...+ +
T Consensus 191 ~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~--~~a~-----~ 257 (422)
T PRK05630 191 RSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGE--LFAT-----L 257 (422)
T ss_pred HHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCch--hhHH-----H
Confidence 233333332 576666663 25656775 4667899999999999999999999988533222 2111 1
Q ss_pred hCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHH-------hhcccCCchHHHHHHHHHcCCCCCC
Q 013892 333 MGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV-------ASVNLCSNISGQILASLVMSPPKVG 404 (434)
Q Consensus 333 l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~ 404 (434)
.....|| |+ +|+|.++ .| ..+|++++ ++++.+.+... ...+...++++..++...|+--+.
T Consensus 258 ~~gv~PD---i~--t~gK~l~--gG~~p~~av~~---~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~- 326 (422)
T PRK05630 258 AAGVTPD---IM--CVGKALT--GGFMSFAATLC---TDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET- 326 (422)
T ss_pred hcCCCCC---ee--eeechhh--cCccccceeec---cHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh-
Confidence 1123467 22 7899985 37 58999977 88988887531 233445677777766665543211
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 013892 405 DESYESYCAERDGILSSLAR 424 (434)
Q Consensus 405 ~~~~~~~~~~r~~l~~~L~~ 424 (434)
+..+++.++.-+.+.+.|++
T Consensus 327 ~~~~~~~~~~g~~l~~~L~~ 346 (422)
T PRK05630 327 GMWRKQVKRIEAELIAGLSP 346 (422)
T ss_pred CcHHHHHHHHHHHHHHHHHH
Confidence 13344555555556665554
No 314
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.26 E-value=1.8e-10 Score=113.56 Aligned_cols=262 Identities=16% Similarity=0.107 Sum_probs=158.7
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh------c-
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI------R- 212 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~------~- 212 (434)
-+|++.+++.+.+..... ........+...++++.+.+..+ -..+++++++++++|+..+++... .
T Consensus 33 ~~p~i~~ai~~~~~~~~~-----~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGseAve~Alkla~~~~~~~~~ 105 (339)
T PF00202_consen 33 NHPEIAEAIAEQANKLNY-----VSFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGSEAVEAALKLARQYHNKRAY 105 (339)
T ss_dssp T-HHHHHHHHHHHHHCSS-----CSTTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTHH
T ss_pred CccccchhHHHHhhhccc-----ccccceeccchhhhhhhhhhccc--cccceeeeccCchHHHHHHHHHhhcccccccc
Confidence 467899999888876432 11122234556666676666542 245689999999999999998865 2
Q ss_pred CCCCEEEEcCCCChhHHHHHHHcC-------------CeEEEEecCCCCC---CCCCHHHHHHHHHHHHhcCCCeeEEEE
Q 013892 213 SENDGILCPIPQYPLYSASIALHG-------------GTLVPYYLDEATG---WGLETSEVKKQLEAAKAKGITVRALVV 276 (434)
Q Consensus 213 ~~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~---~~~d~~~l~~~l~~~~~~g~~~~~i~l 276 (434)
....+|+...-+|.+........+ ..+..+|...... +.-..+.+++.+.....+ ++.+|++
T Consensus 106 ~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~iaaviv 183 (339)
T PF00202_consen 106 TGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNAD--EIAAVIV 183 (339)
T ss_dssp HTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGG--GEEEEEE
T ss_pred cCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCC--cEEEEEE
Confidence 244789999989986443222211 1234455432100 000112234444332222 5655555
Q ss_pred ecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCC
Q 013892 277 INPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGE 355 (434)
Q Consensus 277 ~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~ 355 (434)
.-.+.-.|.. ++.+.+++|.++|++||+++|+||++.++...+. +..+.. .. ..|| ++ +++|+++
T Consensus 184 EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~--~~a~~~--~g---v~PD--iv---~~gK~l~-- 249 (339)
T PF00202_consen 184 EPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK--FFASEH--YG---VDPD--IV---TFGKGLG-- 249 (339)
T ss_dssp ESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS--SSGHHH--HT---SSSS--EE---EEEGGGG--
T ss_pred eccccccCccccccchhhehcccccccccceecccccccccccCC--ccceec--cc---ccCc--cc---ccccchh--
Confidence 5334335654 4667899999999999999999999999655443 333222 22 3377 33 4469996
Q ss_pred CCceeEEEEEecCCHHHHHHHHHH-hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 013892 356 CGKRGGYMEVTGFSAEVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKA 428 (434)
Q Consensus 356 ~G~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 428 (434)
.|+.+|.++. .+++.+.+... ...+...++++..++...|+--+. ++..++..+.-+.+.+.|+++...
T Consensus 250 gG~p~sav~~---~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~-~~~~~~~~~~g~~l~~~L~~l~~~ 319 (339)
T PF00202_consen 250 GGLPISAVLG---SEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEE-EDLLERVRELGERLREGLRELAAR 319 (339)
T ss_dssp TTSSEEEEEE---EHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccccc---cchhhccccccccccccccchHhhhhhhhHHHhhcc-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4899999987 88888776332 224556677777777766643111 245677777788888888876654
No 315
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.26 E-value=1.5e-09 Score=111.31 Aligned_cols=271 Identities=13% Similarity=0.122 Sum_probs=159.9
Q ss_pred CCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
...||+..+ -..-+|.+.+++.+++..... ....+... +....+|+.+.+... ...+.+++++++++|
T Consensus 56 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~-~~~~~~~~----~~~~~lae~L~~~~p--~~~~~v~f~~SGseA 128 (460)
T PRK06916 56 NEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAH-STLLGLAN----VPSILLAEKLIEVVP--EGLKKVFYSDSGATA 128 (460)
T ss_pred CEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCC-ccccccCC----HHHHHHHHHHHHhCC--CCCCEEEEeCCcHHH
Confidence 335565443 234578899999998886421 01111122 233444444444322 223689999999999
Q ss_pred HHHHHHHHhc------CC-CCEEEEcCCCChhHHHHHHHc-CCe------------EEEEecCC--CCCCC--------C
Q 013892 203 VHMMMQLLIR------SE-NDGILCPIPQYPLYSASIALH-GGT------------LVPYYLDE--ATGWG--------L 252 (434)
Q Consensus 203 l~~~l~~l~~------~~-gd~Vlv~~p~y~~~~~~~~~~-g~~------------~~~~~~~~--~~~~~--------~ 252 (434)
+..+++.... .+ ..+|+...-+|.+....+... |.. +..+|... ...++ -
T Consensus 129 ve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~ 208 (460)
T PRK06916 129 VEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKK 208 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHH
Confidence 9999887642 12 368898888888755433322 211 11121110 00011 1
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEec-CCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHH
Q 013892 253 ETSEVKKQLEAAKAKGITVRALVVIN-PGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVS 330 (434)
Q Consensus 253 d~~~l~~~l~~~~~~g~~~~~i~l~~-p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~ 330 (434)
+++.+++.++. .+.++.+|++.- .+.-.|.+ .+++.+++|.++|+++|+++|+||+..++...+. ...+
T Consensus 209 ~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~--~~a~---- 279 (460)
T PRK06916 209 HLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGK--MFAC---- 279 (460)
T ss_pred HHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCch--hhHH----
Confidence 24556666652 122566666654 35556765 5888999999999999999999999988533332 2111
Q ss_pred hhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHH--------HhhcccCCchHHHHHHHHHcCCC
Q 013892 331 RSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPP 401 (434)
Q Consensus 331 ~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~~~~~~l~~~ 401 (434)
..++ ..|| ++ +++|+++ .| +.+|.+++ .+++.+.+.. ....+.+.++++..++...|+--
T Consensus 280 ~~~g-v~PD--iv---~~gK~l~--gG~~Pi~av~~---~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l 348 (460)
T PRK06916 280 EHEN-VTPD--IM---TAGKGLT--GGYLPIAITVT---TDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELY 348 (460)
T ss_pred HhcC-CCCC--ee---eeehhhh--cCccccceeee---cHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHH
Confidence 1111 3377 23 5799995 48 58999987 8888887742 12234456777777776666431
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 402 KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 402 ~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+. +...++.++.-+.+.+.|++..
T Consensus 349 ~~-~~l~~~~~~~g~~l~~~l~~l~ 372 (460)
T PRK06916 349 EK-TNLIEQVARKTEYVATQLEDLF 372 (460)
T ss_pred Hh-ccHHHHHHHHHHHHHHHHHHhh
Confidence 11 2456666667777777777653
No 316
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.26 E-value=9.2e-10 Score=120.22 Aligned_cols=183 Identities=14% Similarity=0.115 Sum_probs=115.7
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCC--CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEe
Q 013892 169 IKGLRDTIAAGIEARDGFPADPN--DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYY 243 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~ 243 (434)
+.+.|+.+|+++ | ++++ +|++|+|+|+++.+++..+...+||+|++..-.|+..... ++..|+++..++
T Consensus 80 ~e~aR~~ia~~l----g--a~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~ 153 (805)
T PLN02724 80 IESARQQVLEYF----N--APPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVD 153 (805)
T ss_pred HHHHHHHHHHHh----C--CCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEecc
Confidence 567778888877 3 4444 5899999999999999887436899999988777654433 345699999988
Q ss_pred cCCCC------CCCCCH--HHHHHHHHH----HHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc-----CCEE
Q 013892 244 LDEAT------GWGLET--SEVKKQLEA----AKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE-----GLVL 306 (434)
Q Consensus 244 ~~~~~------~~~~d~--~~l~~~l~~----~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~-----~~~l 306 (434)
++.+. .-.+++ +.|++.++. ....+.++++|.+++.+|-||.++|.+.+.++.+.++++ ++++
T Consensus 154 ~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v 233 (805)
T PLN02724 154 IEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMV 233 (805)
T ss_pred chhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEE
Confidence 76211 112232 556655421 011122568999999999999999955433333322222 3579
Q ss_pred EEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 307 LADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 307 i~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
++|.+..-... ...+ ..++ .| +++.|+.|.|.|-.| +|++.+ .+++.+.+.
T Consensus 234 ~vDaaQ~~g~~-----piDv----~~~~---~D---fl~~S~HK~~GgP~G--~G~L~v---r~~~~~~l~ 284 (805)
T PLN02724 234 LLDAAKGCGTS-----PPDL----SRYP---AD---FVVVSFYKIFGYPTG--LGALLV---RRDAAKLLK 284 (805)
T ss_pred EeehhhhcCCC-----CCCh----hhcC---CC---EEEEecceeccCCCC--ceEEEE---ehhhhhhhc
Confidence 99998764211 1111 1122 45 678899997722334 677765 666665543
No 317
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.26 E-value=1.1e-09 Score=111.34 Aligned_cols=259 Identities=12% Similarity=0.058 Sum_probs=151.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC-----
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS----- 213 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~----- 213 (434)
.-++++++++.+.+++... ....+.......++.+.+++.. + ..-+.+++++++++++..+++.....
T Consensus 61 h~~p~v~~ai~~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~----~--~~~~~v~f~~sGseA~e~AlklAr~~~~~~~ 133 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDKMSH-VMFGGFTHKPAIELCQKLVKMT----P--NALDCVFLADSGSVAVEVALKMALQYWQAKG 133 (427)
T ss_pred CCCHHHHHHHHHHHHhcCC-ccccccCCHHHHHHHHHHHhhC----C--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhhC
Confidence 4578899999888876432 1111112222334444444432 2 22368999999999999988865411
Q ss_pred -C-CCEEEEcCCCChhHHHHHHHc-CCe-------------EEEEecCCCCCCC-----CCHHHHHHHHHHHHhcCCCee
Q 013892 214 -E-NDGILCPIPQYPLYSASIALH-GGT-------------LVPYYLDEATGWG-----LETSEVKKQLEAAKAKGITVR 272 (434)
Q Consensus 214 -~-gd~Vlv~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~g~~~~ 272 (434)
+ ..+|+...-+|.+....+... |.. +..++.. ...+. -|++++++.+... +.++.
T Consensus 134 ~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~l~~~l~~~---~~~va 209 (427)
T TIGR00508 134 EKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEEAITPLAKLMELH---SDEIA 209 (427)
T ss_pred CCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHHHHHHHHHHHHhc---CCcEE
Confidence 2 367998888888754433222 211 0111110 00111 1456677777532 22455
Q ss_pred EEEEecC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCC
Q 013892 273 ALVVINP-GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSK 350 (434)
Q Consensus 273 ~i~l~~p-~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK 350 (434)
+|++.-. ++-.|. ..+.+.+++|.++|+++|+++|+||++.++...+. ..... . .+ ..+| |+ +++|
T Consensus 210 avivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~--~~~~~-~-~~---v~pD---i~--~~gK 277 (427)
T TIGR00508 210 AVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGK--LFACE-H-AG---VVPD---IL--CVGK 277 (427)
T ss_pred EEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--cchhh-h-cC---CCCC---EE--Eech
Confidence 5555532 554555 45789999999999999999999999987544332 21111 0 11 2256 33 3799
Q ss_pred CCCCCCCc-eeEEEEEecCCHHHHHHHHHH------hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHH
Q 013892 351 GYYGECGK-RGGYMEVTGFSAEVREQIYKV------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 351 ~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
.++ .|+ .++.++. .+++++.+... ...+...++++..++...++.-+. ++..++.++.-+.+.+.|+
T Consensus 278 ~l~--gG~~p~~a~~~---~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~ 351 (427)
T TIGR00508 278 ALT--GGYMTLSATVT---TDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE-GEWQKQVSAIENQLKRELS 351 (427)
T ss_pred hhh--cCcccceEEEE---cHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHH
Confidence 995 475 6777766 88888888642 222334567777777666652111 1456777777777888887
Q ss_pred HHH
Q 013892 424 RRA 426 (434)
Q Consensus 424 ~~~ 426 (434)
+..
T Consensus 352 ~l~ 354 (427)
T TIGR00508 352 PLR 354 (427)
T ss_pred Hhh
Confidence 654
No 318
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.25 E-value=1.7e-09 Score=110.58 Aligned_cols=259 Identities=14% Similarity=0.134 Sum_probs=155.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc------
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------ 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~------ 212 (434)
.-+|.+.+++.+++.+........|. .+....+|+.+.+..+ ...+.+++++++++|+..+++....
T Consensus 70 h~~p~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~~sGseAve~AlKlA~~~~~~rg 142 (453)
T PRK06943 70 HANPRINAALKDQLDTLEHAMLAGCT-----HEPAIELAERLAALTG--GTLGHAFFASDGASAVEIALKMSFHAWRNRG 142 (453)
T ss_pred CCCHHHHHHHHHHHHhcCCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCCHHHHHHHHHHHHHHHHHhC
Confidence 45788999999988764210011122 2234445555544322 1235899999999999999987621
Q ss_pred -CCCCEEEEcCCCChhHHHHHHH-cC--------------CeEEEEecCCCCCCC--------CCHHHHHHHHHHHHhcC
Q 013892 213 -SENDGILCPIPQYPLYSASIAL-HG--------------GTLVPYYLDEATGWG--------LETSEVKKQLEAAKAKG 268 (434)
Q Consensus 213 -~~gd~Vlv~~p~y~~~~~~~~~-~g--------------~~~~~~~~~~~~~~~--------~d~~~l~~~l~~~~~~g 268 (434)
....+|+...-+|.+....... .| ...+++|......+. -+++++++.++. .+
T Consensus 143 ~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~ 219 (453)
T PRK06943 143 RGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RA 219 (453)
T ss_pred CCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CC
Confidence 1236799999888875432221 11 111222211000011 124666666653 12
Q ss_pred CCeeEEEEec-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 269 ITVRALVVIN-PGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 269 ~~~~~i~l~~-p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
.++.+|++.- .+.-.|. ..+.+.+++|.++|++||+++|+||+..++...+. +..+. .+ ...|| ++
T Consensus 220 ~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~--~fa~~----~~-gv~PD--iv--- 287 (453)
T PRK06943 220 GKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGT--FFACE----QA-GVWPD--FL--- 287 (453)
T ss_pred CceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcc--hhHHH----hC-CCCCC--eE---
Confidence 2566666664 2555676 45778999999999999999999999999543332 22221 11 13477 23
Q ss_pred cCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHH-------HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHH
Q 013892 347 SVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK-------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGI 418 (434)
Q Consensus 347 S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l 418 (434)
+++|+++ .| +.+|.++. .+++.+.+.. ....+.+.++++.+++.+.|+--+. +...++..+.-+.+
T Consensus 288 t~gKgl~--gG~~Pi~av~~---~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~-~~l~~~~~~~G~~l 361 (453)
T PRK06943 288 CLSKGIS--GGYLPLSLVLS---RDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE-DDVLARNARKSARL 361 (453)
T ss_pred eeehhhc--cCcccceEEEE---cHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHH
Confidence 5599995 48 59999987 8888887753 1234556788887777776653211 23556666666667
Q ss_pred HHHHHHH
Q 013892 419 LSSLARR 425 (434)
Q Consensus 419 ~~~L~~~ 425 (434)
.+.|++.
T Consensus 362 ~~~L~~l 368 (453)
T PRK06943 362 RAALAPL 368 (453)
T ss_pred HHHHHHH
Confidence 7777665
No 319
>PRK06917 hypothetical protein; Provisional
Probab=99.25 E-value=2.4e-09 Score=109.31 Aligned_cols=262 Identities=15% Similarity=0.135 Sum_probs=154.1
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc------
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------ 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~------ 212 (434)
.-+|.+.+++.+++.+........|. .+.+..+|+.+.+... ...+.+++++++++|+..+++....
T Consensus 47 h~hp~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~~~~rg 119 (447)
T PRK06917 47 HGVKEIADAIKEQAEEVSFVYRSQFT-----SEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEANETAMKIAIQHFQERG 119 (447)
T ss_pred CCCHHHHHHHHHHHhhCcCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCChHHHHHHHHHHHHHHHHhcC
Confidence 34788999999988864210001122 2334455555544322 2235799999999999999987621
Q ss_pred -CCCCEEEEcCCCChhHHHHHHH-cCCe------------EEEEecCCC--CCCCC--------CHHHHHHHHHHHHhcC
Q 013892 213 -SENDGILCPIPQYPLYSASIAL-HGGT------------LVPYYLDEA--TGWGL--------ETSEVKKQLEAAKAKG 268 (434)
Q Consensus 213 -~~gd~Vlv~~p~y~~~~~~~~~-~g~~------------~~~~~~~~~--~~~~~--------d~~~l~~~l~~~~~~g 268 (434)
....+|+...-+|.+....... .|.. +..++.... ..++- +++.+++.++... +
T Consensus 120 ~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~ 197 (447)
T PRK06917 120 IQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG--A 197 (447)
T ss_pred CCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--C
Confidence 1236899988888876544322 2211 111111100 00111 2345566555321 1
Q ss_pred CCeeEEEEecC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 269 ITVRALVVINP-GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 269 ~~~~~i~l~~p-~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
.++.+|++.-. +|--|. ..+.+.+++|.++|+++|+++|+||++.++...+. .... ..++ ..|| + -
T Consensus 198 ~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~--~~a~----~~~g-v~PD--i---~ 265 (447)
T PRK06917 198 EHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGA--MFAM----EHWG-VEPD--I---M 265 (447)
T ss_pred CceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccc--hhhH----HhcC-CCCC--E---E
Confidence 14656665532 333444 45688999999999999999999999998433222 1111 1111 3377 2 3
Q ss_pred cCCCCCCCCCCc-eeEEEEEecCCHHHHHHHHHH-----hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHH
Q 013892 347 SVSKGYYGECGK-RGGYMEVTGFSAEVREQIYKV-----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILS 420 (434)
Q Consensus 347 S~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 420 (434)
+|+|.++ -|. .+|.++. .+++.+.+... ...+.+.++++.+++...|+--+. ++..++.++.-+.+.+
T Consensus 266 ~~gK~l~--~G~~Pi~a~~~---~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~ 339 (447)
T PRK06917 266 TLGKGLG--AGYTPIAATVV---SDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEK-HNLPEKAAEKGEYLIK 339 (447)
T ss_pred Eeeehhc--cCCcceEEEEE---cHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHH
Confidence 6799995 485 8999987 88888877532 123456778887777777653211 2456677777777777
Q ss_pred HHHHHHH
Q 013892 421 SLARRAK 427 (434)
Q Consensus 421 ~L~~~~~ 427 (434)
.|+++..
T Consensus 340 ~L~~l~~ 346 (447)
T PRK06917 340 GLQKVQQ 346 (447)
T ss_pred HHHHHHh
Confidence 7776643
No 320
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.25 E-value=7.9e-10 Score=112.15 Aligned_cols=259 Identities=14% Similarity=0.096 Sum_probs=151.1
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc------
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------ 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~------ 212 (434)
.-+|.+.+++.+++.+... ....+. ..+....+++.+.+..+ ...+.+++++++++|+..+++....
T Consensus 59 h~~p~i~~Ai~~q~~~~~~-~~~~~~----~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~~~~~g 131 (428)
T PRK07986 59 YNHPQLNAAMKSQIDAMSH-VMFGGI----THPPAIELCRKLVAMTP--QPLECVFLADSGSVAVEVAMKMALQYWQAKG 131 (428)
T ss_pred CCCHHHHHHHHHHHhhcCC-cccccc----CCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 3467899999888876421 011111 12344555555554332 2346899999999999999887542
Q ss_pred CCCCEEEEcCCCChhHHHHHHHc-CCe-------------EEEEecCCC---CCC-CCCHHHHHHHHHHHHhcCCCeeEE
Q 013892 213 SENDGILCPIPQYPLYSASIALH-GGT-------------LVPYYLDEA---TGW-GLETSEVKKQLEAAKAKGITVRAL 274 (434)
Q Consensus 213 ~~gd~Vlv~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~---~~~-~~d~~~l~~~l~~~~~~g~~~~~i 274 (434)
....+|+...-+|.+........ +.. +..++.... ..| .-|++++++.++.. +.++.+|
T Consensus 132 ~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaav 208 (428)
T PRK07986 132 EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAV 208 (428)
T ss_pred CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEE
Confidence 12468999998888654322221 211 111111100 001 12566777777532 2245555
Q ss_pred EEec-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCC
Q 013892 275 VVIN-PGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGY 352 (434)
Q Consensus 275 ~l~~-p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~ 352 (434)
++.- .+.-.|. ..+++.+++|.++|++||+++|+||++.++...+. ...+. .....|| ++ +|+|.+
T Consensus 209 i~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~--~fa~~-----~~gv~PD--i~---t~gK~l 276 (428)
T PRK07986 209 ILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGK--LFACE-----HAGIAPD--IL---CLGKAL 276 (428)
T ss_pred EEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCC--eeeec-----ccCCCCC--EE---Eechhh
Confidence 5543 2444565 44668999999999999999999999987533222 21111 1112366 23 589999
Q ss_pred CCCCC-ceeEEEEEecCCHHHHHHHHHH------hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 353 YGECG-KRGGYMEVTGFSAEVREQIYKV------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 353 ~g~~G-~R~G~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+ .| +.+|.+++ .+++++.+... ...+...++++.+++...|+--+. ++.+++.++.-+.+.+.|++.
T Consensus 277 ~--gG~~p~~av~~---~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~-~~~~~~~~~~g~~l~~~l~~l 350 (428)
T PRK07986 277 T--GGTMTLSATLT---TREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES-GDWQQQVAAIEAQLREELAPL 350 (428)
T ss_pred h--CCcccCcchhc---hHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHH
Confidence 4 47 58887766 88888888642 233445677777777666643111 134556666666666666654
No 321
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.25 E-value=1.9e-09 Score=110.11 Aligned_cols=260 Identities=12% Similarity=0.121 Sum_probs=149.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-----C
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----S 213 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-----~ 213 (434)
.-+|.+++++.+.+.+........+. .+....+++.+.+... ...+.+++++++++|+..+++.... .
T Consensus 65 h~~p~v~~ai~~ql~~l~~~~~~~~~-----~~~~~~la~~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g 137 (445)
T PRK09221 65 HGRPEIVEAVARQAATLDYAPAFQMG-----HPLAFELAERLAELAP--GGLDHVFFTNSGSESVDTALKIALAYHRARG 137 (445)
T ss_pred CCCHHHHHHHHHHHHhccCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 34788999998888764210111121 1233345555544322 1246899999999999999887541 1
Q ss_pred --CCCEEEEcCCCChhHHHHHHHcCC-------------eEEEEecCC---CCCCCC--------CHHHHHHHHHHHHhc
Q 013892 214 --ENDGILCPIPQYPLYSASIALHGG-------------TLVPYYLDE---ATGWGL--------ETSEVKKQLEAAKAK 267 (434)
Q Consensus 214 --~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~--------d~~~l~~~l~~~~~~ 267 (434)
...+|+...-+|.+........+. .+..++... ...|.. ..+++++.++.. .
T Consensus 138 ~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~ 215 (445)
T PRK09221 138 QGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--D 215 (445)
T ss_pred CCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--C
Confidence 135798888888875433221111 011222110 000111 134566666532 1
Q ss_pred CCCeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 268 GITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
..++.+|++.-.+.-.|... +.+.+++|.++|+++|+++|+||++.++...+. ...+ ..++ ..|| +-
T Consensus 216 ~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~--~~~~----~~~g-v~PD-----i~ 283 (445)
T PRK09221 216 ASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA--AFAA----ERFG-VTPD-----II 283 (445)
T ss_pred CCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCch--hhHH----HhcC-CCCC-----EE
Confidence 12455666554465577754 567899999999999999999999987433332 1111 1111 2366 23
Q ss_pred cCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHH--------HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHH
Q 013892 347 SVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (434)
Q Consensus 347 S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 417 (434)
+++|.++ .| ..+|.+++ ++++++.+.. ....+...++++..++...|+.-+. +...++.++.-+.
T Consensus 284 ~~gK~l~--gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~-~~l~~~~~~~g~~ 357 (445)
T PRK09221 284 TFAKGLT--NGAIPMGAVIA---SDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE-EDLFERAAELAPY 357 (445)
T ss_pred Eeccccc--cCcccceeeEE---cHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 7899995 36 67898876 8888887743 1233445677776666666543211 1355666666666
Q ss_pred HHHHHHHH
Q 013892 418 ILSSLARR 425 (434)
Q Consensus 418 l~~~L~~~ 425 (434)
+.+.|++.
T Consensus 358 l~~~l~~l 365 (445)
T PRK09221 358 FEDAVHSL 365 (445)
T ss_pred HHHHHHhh
Confidence 66666654
No 322
>PRK07046 aminotransferase; Validated
Probab=99.25 E-value=1.4e-09 Score=111.24 Aligned_cols=263 Identities=16% Similarity=0.063 Sum_probs=159.5
Q ss_pred CCCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
+....||+..+ -..-+|.+.+++.+++.... ...+ +. +....+|+.+.+.. ..+.+.++++++
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~---~~~~-~~----~~~~~lAe~l~~~~----~~~~v~F~nSGt 140 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGL---TTML-PS----EDAAWVGEELARRF----GLPYWQVATTAT 140 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCC---CCCC-CC----HHHHHHHHHHHHHh----CCCEEEEECCHH
Confidence 34557787554 23456889999999988642 2222 22 34444555554443 256899999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHH-H-cCCeEEE------Ee--cCC---CCCCCCCHHHHHHHHHHHHh
Q 013892 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIA-L-HGGTLVP------YY--LDE---ATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 201 ~al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~-~-~g~~~~~------~~--~~~---~~~~~~d~~~l~~~l~~~~~ 266 (434)
+|...+++.... ...++|+...-+|.++.+... . .+..... ++ ... .-.| -|++.+++.+..
T Consensus 141 EA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~--- 216 (453)
T PRK07046 141 DANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALAD--- 216 (453)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCC---
Confidence 999999887642 234789988888887643221 1 1111000 00 000 0012 278888888742
Q ss_pred cCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEE
Q 013892 267 KGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSF 345 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i 345 (434)
.++.+|++.-.+.-.|.+ .+.+.+++|.++|+++|+++|+||+.. +..+-.+ .. ..+ ...|| ++
T Consensus 217 --~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg-~~------~~~-gv~PD--i~-- 281 (453)
T PRK07046 217 --GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGG-YT------RAH-GLEPD--FL-- 281 (453)
T ss_pred --CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcc-hh------HHh-CCCcc--ce--
Confidence 156555554223334544 455789999999999999999999986 3222111 11 111 13367 22
Q ss_pred ecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH----------hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHH
Q 013892 346 QSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV----------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (434)
Q Consensus 346 ~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r 415 (434)
+|+|.++ -|+.+|.++. .+++++.+... ...+.+.++++.+++...|+--+. ++.+++..+.-
T Consensus 282 -t~gK~lg--gG~Pi~av~g---~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~-~~~~~~~~~~g 354 (453)
T PRK07046 282 -VVGKPIA--GGVPCAVYGF---SAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT-EAAYAHMLALA 354 (453)
T ss_pred -eehhhhc--CCCcceeeee---hHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc-ccHHHHHHHHH
Confidence 5899995 4999999876 88998887531 123446778887777776653211 23566666666
Q ss_pred HHHHHHHHHHH
Q 013892 416 DGILSSLARRA 426 (434)
Q Consensus 416 ~~l~~~L~~~~ 426 (434)
+.+.+.|++..
T Consensus 355 ~~l~~~L~~l~ 365 (453)
T PRK07046 355 ARLAAGLRAVI 365 (453)
T ss_pred HHHHHHHHHHH
Confidence 77777776654
No 323
>PLN02590 probable tyrosine decarboxylase
Probab=99.24 E-value=2e-09 Score=111.25 Aligned_cols=192 Identities=13% Similarity=0.099 Sum_probs=141.9
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCC-----CCCEEEcCChHHHHHHHHHHHhc----------CCCCEEEEcCCC
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPAD-----PNDIFLTDGASPAVHMMMQLLIR----------SENDGILCPIPQ 224 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~l~~l~~----------~~gd~Vlv~~p~ 224 (434)
...|..+.+..++.+.+.+|+.+..|.+-. ...=++|+|+++++..++.+... .+.-.|++++-+
T Consensus 159 ~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~a 238 (539)
T PLN02590 159 GFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQT 238 (539)
T ss_pred cCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCc
Confidence 345666667889999999999999987632 13457789999888776655421 022257778889
Q ss_pred ChhHHHHHHHcCC---eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH
Q 013892 225 YPLYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 225 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
|..+..+++.+|+ .++.+|++..+++.+|++.|+++|++..++|..+-+|+.+-..-.||.+=+ +++|.++|++
T Consensus 239 H~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp---l~~Ia~i~~~ 315 (539)
T PLN02590 239 HSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP---LVPLGNIAKK 315 (539)
T ss_pred hHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHH
Confidence 9999999999998 588899887667899999999999987777766767777777888999866 9999999999
Q ss_pred cCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 302 ~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
||+|+.+|.+|+++..-- ......+..+.. -| -| .-.+.|.+. ...-+|.+.+
T Consensus 316 ~g~WlHVDaA~GG~al~~----~~~r~~~~Gie~--AD--Si-t~D~HK~l~--~p~~cg~llv 368 (539)
T PLN02590 316 YGIWLHVDAAYAGNACIC----PEYRKFIDGIEN--AD--SF-NMNAHKWLF--ANQTCSPLWV 368 (539)
T ss_pred hCCeEEEecchhhhhhcC----hhhHHHhcCCcc--CC--EE-EECchhhcC--cCcCEEEEEe
Confidence 999999999999965322 122233333221 12 23 447899762 6777887765
No 324
>PRK06105 aminotransferase; Provisional
Probab=99.24 E-value=1.5e-09 Score=111.27 Aligned_cols=273 Identities=14% Similarity=0.080 Sum_probs=159.8
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|.+++++.+++++... ...+. ....+.+..+++.+.+... ...+.+++++++++
T Consensus 47 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~--~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse 120 (460)
T PRK06105 47 GKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPF--YHTFS--HKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGSE 120 (460)
T ss_pred CCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCC--eeccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence 4446676554 234578899999999886431 11111 1122334445555544322 23468999999999
Q ss_pred HHHHHHHHHhc-----C-C-CCEEEEcCCCChhHHHHHHHc-CCe------------EEEEecCCCCCCC----------
Q 013892 202 AVHMMMQLLIR-----S-E-NDGILCPIPQYPLYSASIALH-GGT------------LVPYYLDEATGWG---------- 251 (434)
Q Consensus 202 al~~~l~~l~~-----~-~-gd~Vlv~~p~y~~~~~~~~~~-g~~------------~~~~~~~~~~~~~---------- 251 (434)
|+..+++.... . + ..+|+...-+|.+........ |.. +..++......+.
T Consensus 121 Ave~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 200 (460)
T PRK06105 121 ANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFA 200 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHH
Confidence 99999987521 1 2 357888888887654332111 111 1111111000000
Q ss_pred -CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHH
Q 013892 252 -LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (434)
Q Consensus 252 -~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~ 329 (434)
..++++++.+... ...++.+|++.-.+.-.|.+ .+++.+++|.++|++||+++|+||++.++...+. +..+.
T Consensus 201 ~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~--~f~~~-- 274 (460)
T PRK06105 201 TRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN--MFGCE-- 274 (460)
T ss_pred HHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch--hhhHH--
Confidence 0134566665421 11245555555335555665 5788899999999999999999999988533332 22211
Q ss_pred HhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHH--------hhcccCCchHHHHHHHHHcCC
Q 013892 330 SRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV--------ASVNLCSNISGQILASLVMSP 400 (434)
Q Consensus 330 ~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~ 400 (434)
.+ ...|| +-+|+|.++ .| +.+|.++. .+++.+.+... ...+...++++.+++...|+-
T Consensus 275 --~~-~v~PD-----i~~~gK~lg--gG~~P~~av~~---~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~ 341 (460)
T PRK06105 275 --TF-GIKPD-----ILVMSKQLS--SSYQPLSAVLM---NEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAI 341 (460)
T ss_pred --hc-CCCCC-----eeeeecccc--cCcccceEEEE---cHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHH
Confidence 11 13377 227799995 36 58999987 88888877532 223456777777776666643
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 401 PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 401 ~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
-+. ++..+..++.-+.+.+.|++.
T Consensus 342 i~~-~~l~~~v~~~g~~l~~~L~~l 365 (460)
T PRK06105 342 IEE-RDLVGNAAERGARLQARLRAL 365 (460)
T ss_pred HHh-ccHHHHHHHHHHHHHHHHHHh
Confidence 211 245666777777777777765
No 325
>PLN02271 serine hydroxymethyltransferase
Probab=99.24 E-value=9.4e-10 Score=112.04 Aligned_cols=261 Identities=13% Similarity=0.072 Sum_probs=158.2
Q ss_pred CCCHHHHHHHHHHHHcCCCC---CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCC--CCEEEcCChHHHHHHHHHHHhcC
Q 013892 139 LFSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADP--NDIFLTDGASPAVHMMMQLLIRS 213 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~al~~~l~~l~~~ 213 (434)
..++.|+++....+.+.... +.--|+-...+.++.....+...+.+|..... -+|-.- +++.|...++.+|+ +
T Consensus 159 ~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~ALl-~ 236 (586)
T PLN02271 159 FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGLL-L 236 (586)
T ss_pred cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHhc-C
Confidence 45677777765555443211 11223333334455555555655556633211 345555 45567777777887 7
Q ss_pred CCCEEEEcCCCChhHHHHH---------HHcCC--eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCC
Q 013892 214 ENDGILCPIPQYPLYSASI---------ALHGG--TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (434)
Q Consensus 214 ~gd~Vlv~~p~y~~~~~~~---------~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NP 282 (434)
|||+|+..+..|.++.... ...|. ++++|.++++ +..+|.++|++..... ++|+|++..-.||
T Consensus 237 PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~-----rPKLII~g~Sayp 310 (586)
T PLN02271 237 PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDF-----RPKILICGGSSYP 310 (586)
T ss_pred CCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhc-----CCeEEEECchhcc
Confidence 9999999988887765432 23353 4455556544 3479999999855443 8999998777777
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEE
Q 013892 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (434)
Q Consensus 283 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~ 362 (434)
..++ +++|.++|+++|+++++|.++......... +.+.. .+-| |+..|..|+| +|-|+|.
T Consensus 311 --r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~-~~sP~--------~~aD---vvt~TTHKtL---rGPrGG~ 370 (586)
T PLN02271 311 --REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKE-CVNPF--------DYCD---IVTSTTHKSL---RGPRGGI 370 (586)
T ss_pred --CcCC---HHHHHHHHHHcCCEEEEECcccccccccCc-CCCCC--------cCCc---EEEeCCcccC---CCCCceE
Confidence 5566 888899999999999999999876554331 11110 0123 7899999987 5888888
Q ss_pred EEEecC------------------CHHHHHHHHHHhh--cccCCchHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHH
Q 013892 363 MEVTGF------------------SAEVREQIYKVAS--VNLCSNISGQILASLVMS---PPKVGDESYESYCAERDGIL 419 (434)
Q Consensus 363 ~~~~~~------------------~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~ 419 (434)
+.. .. .+++.+.+.+..- ...++.....++....+. .+++ .+..++..++.+.|.
T Consensus 371 I~~-r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~ef-k~Ya~QVv~NAkaLA 448 (586)
T PLN02271 371 IFY-RKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEY-KAYMQQVKKNAQALA 448 (586)
T ss_pred EEe-cccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHH
Confidence 875 21 1235555554432 111222111111122222 2333 567778888899999
Q ss_pred HHHHHHHHHH
Q 013892 420 SSLARRAKAN 429 (434)
Q Consensus 420 ~~L~~~~~~~ 429 (434)
+.|.+++..+
T Consensus 449 ~~L~~~G~~v 458 (586)
T PLN02271 449 SALLRRKCRL 458 (586)
T ss_pred HHHHHCCCeE
Confidence 9888775544
No 326
>PRK07481 hypothetical protein; Provisional
Probab=99.24 E-value=4.2e-09 Score=107.67 Aligned_cols=266 Identities=13% Similarity=0.098 Sum_probs=153.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc------
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------ 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~------ 212 (434)
.-+|++.+++.+++..... ...+. .-..+.+..+|+.+.+..+ +-..+.+++++++++|+..+++....
T Consensus 58 h~~p~v~~Ai~~ql~~~~~--~~~~~--~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g 132 (449)
T PRK07481 58 HNREEVKEAIVRQLDELEY--YSTFD--GTTHPRAIELSYELIDMFA-PEGMRRVFFSSGGSDSVETALKLARQYWKVRG 132 (449)
T ss_pred CCCHHHHHHHHHHHHhccc--eeccc--ccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCchHHHHHHHHHHHHHHHHhcC
Confidence 3467899999888876421 11110 0012344555555554432 11245899999999999999887541
Q ss_pred CC-CCEEEEcCCCChhHHHHHHHcCCe-------------EEEEecCC--CCCCC-CCHHHHHHHHH----HHH--hcCC
Q 013892 213 SE-NDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDE--ATGWG-LETSEVKKQLE----AAK--AKGI 269 (434)
Q Consensus 213 ~~-gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~~~~~~--~~~~~-~d~~~l~~~l~----~~~--~~g~ 269 (434)
.+ ..+|+...-+|.+........+.. +..++... ...|. .|.+.+++.+. ..- ..+.
T Consensus 133 ~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~ 212 (449)
T PRK07481 133 QPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPD 212 (449)
T ss_pred CCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 02 357888888888755432222111 11111110 00122 24444433321 110 1112
Q ss_pred CeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecC
Q 013892 270 TVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV 348 (434)
Q Consensus 270 ~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~ 348 (434)
++.+|++.-.+.-.|.+ .+.+.+++|.++|++||+++|.||+..++...+. ...+ ..+ ...|| ++ ++
T Consensus 213 ~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~a~----~~~-gv~PD--iv---~~ 280 (449)
T PRK07481 213 TIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGS--WFGS----RGW-GVKPD--IM---CL 280 (449)
T ss_pred cEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCch--hhHh----hhc-CCCCC--EE---EE
Confidence 56566655335445764 5677899999999999999999999998543332 1111 111 13477 23 55
Q ss_pred CCCCCCCCC-ceeEEEEEecCCHHHHHHHHH--------HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHH
Q 013892 349 SKGYYGECG-KRGGYMEVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGIL 419 (434)
Q Consensus 349 SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 419 (434)
+|+++ .| +.+|.+++ .+++.+.+.. ....+.+.++++.+++...|+--+. +...++.++.-+.+.
T Consensus 281 gKgl~--gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~ 354 (449)
T PRK07481 281 AKGIT--SGYVPLGATMV---NARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVR-EDLPANAAKRGAYLL 354 (449)
T ss_pred eeccc--CCCcCceEEEE---cHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHH
Confidence 99995 47 58999987 8888888753 1234556788887777776643111 245566666667777
Q ss_pred HHHHHHHH
Q 013892 420 SSLARRAK 427 (434)
Q Consensus 420 ~~L~~~~~ 427 (434)
+.|++...
T Consensus 355 ~~L~~l~~ 362 (449)
T PRK07481 355 EGLQPLKE 362 (449)
T ss_pred HHHHHHhh
Confidence 77776543
No 327
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.23 E-value=2.4e-09 Score=109.81 Aligned_cols=269 Identities=14% Similarity=0.118 Sum_probs=158.3
Q ss_pred Cccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
..||+..+ -..-+|.+.+++.+++.+........|. .+.+..+++.+.+.. +...+.+++++++++|+
T Consensus 48 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~-----~~~~~~lae~L~~~~--p~~~~~v~f~~sGsEAv 120 (466)
T PRK07030 48 RYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFS-----HEPVIELSERLVKIT--PPGLSRCFYADNGSSAI 120 (466)
T ss_pred EEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccC-----CHHHHHHHHHHHHhC--CCCcCEEEEeCCcHHHH
Confidence 35565444 2344678999998888764210011222 233444555554432 22346899999999999
Q ss_pred HHHHHHHhc-----C--CCCEEEEcCCCChhHHHHHHHcCCe-------------EEEEecCCC--CCCCC--------C
Q 013892 204 HMMMQLLIR-----S--ENDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEA--TGWGL--------E 253 (434)
Q Consensus 204 ~~~l~~l~~-----~--~gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~--~~~~~--------d 253 (434)
..+++.... . ...+|+...-+|.+........+.. +..+|.... ..++. +
T Consensus 121 e~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 200 (466)
T PRK07030 121 EVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRM 200 (466)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHH
Confidence 999887631 1 2357888888888765433322111 111111110 00111 2
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEec-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHh
Q 013892 254 TSEVKKQLEAAKAKGITVRALVVIN-PGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSR 331 (434)
Q Consensus 254 ~~~l~~~l~~~~~~g~~~~~i~l~~-p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~ 331 (434)
++.+++.++. .+.++.+|++.- .+.-.|. ..+++.+++|.++|+++|+++|+||+..++...+. +...
T Consensus 201 l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~--~~a~----- 270 (466)
T PRK07030 201 FAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGT--MFAC----- 270 (466)
T ss_pred HHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcccc--chHH-----
Confidence 4556666653 122565665553 2444566 45668899999999999999999999998544332 2221
Q ss_pred hhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHH--------HhhcccCCchHHHHHHHHHcCCCC
Q 013892 332 SMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPPK 402 (434)
Q Consensus 332 ~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~~~~~~l~~~~ 402 (434)
+.....|| ++ +|+|+++ .| +.+|.+++ .+++.+.+.. ....+...++++.+++...|+--+
T Consensus 271 ~~~gv~PD--iv---~~gKgl~--gG~~Pi~av~~---~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~ 340 (466)
T PRK07030 271 EQAGIRPD--FL---CLSKALT--GGYLPLAAVLT---TDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFE 340 (466)
T ss_pred HhcCCCCC--EE---eeehhcc--CCcccceEEEe---cHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 11123477 23 5599995 48 49999987 8899888742 123445678888877777764321
Q ss_pred CChHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
. ++..++.++.-+.+.+.|++.
T Consensus 341 ~-~~l~~~~~~~G~~l~~~L~~l 362 (466)
T PRK07030 341 Q-DNVIENNRALARRMAEATAHL 362 (466)
T ss_pred h-cCHHHHHHHHHHHHHHHHHHH
Confidence 1 235566666666666666654
No 328
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.23 E-value=2.9e-11 Score=104.59 Aligned_cols=63 Identities=27% Similarity=0.489 Sum_probs=60.1
Q ss_pred CCCCcchHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 013892 163 YSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP 226 (434)
Q Consensus 163 Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~ 226 (434)
|.+..|.++||+++|+|+.+++| +.+++++|++|+|+++++..++..++ ++||.|++++|+|+
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~-dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA-DPGDAFLVPTPYYA 152 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc-CCCCEEEEeCCCCC
Confidence 88999999999999999999988 67889999999999999999999999 89999999999997
No 329
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.23 E-value=1.4e-09 Score=110.42 Aligned_cols=258 Identities=14% Similarity=0.104 Sum_probs=149.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc------
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------ 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~------ 212 (434)
.-+|.+.+++.+++.+... ....+.......+|.+.+++.+ +...+.+++++++++|+..+++....
T Consensus 60 h~~p~v~~ai~~q~~~~~~-~~~~~~~~~~~~~lae~L~~~~------p~~~~~v~f~~sGseAve~AlklAr~~~~~~g 132 (429)
T PRK06173 60 YNHPRLNAAATNQLAKMSH-IMFGGFTHEPAVELAQKLLEIL------PPSLNKIFFADSGSVAVEVAMKMALQYQQAKG 132 (429)
T ss_pred CCCHHHHHHHHHHHHhcCC-ccccccCCHHHHHHHHHHHhhC------CCCcCEEEEeCCchHHHHHHHHHHHHHHHHhC
Confidence 3468899999988876431 0111112222334444444432 22346899999999999999887541
Q ss_pred CC-CCEEEEcCCCChhHHHH-HHHcCCe-------------EEEEecCCCCCCC-----CCHHHHHHHHHHHHhcCCCee
Q 013892 213 SE-NDGILCPIPQYPLYSAS-IALHGGT-------------LVPYYLDEATGWG-----LETSEVKKQLEAAKAKGITVR 272 (434)
Q Consensus 213 ~~-gd~Vlv~~p~y~~~~~~-~~~~g~~-------------~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~g~~~~ 272 (434)
.+ ..+|+...-+|.+.... +...|.. +..+|... ..+. -+++.|++.++. .+.++.
T Consensus 133 ~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~l~~l~~~i~~---~~~~iA 208 (429)
T PRK06173 133 EVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPS-IKFGEEWNDEAIEPLQDLLEQ---KGDEIA 208 (429)
T ss_pred CCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCC-cccchhHHHHHHHHHHHHHHh---CCCcEE
Confidence 02 35788888888774322 1111110 11121110 0011 135566666653 122566
Q ss_pred EEEEecC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCC
Q 013892 273 ALVVINP-GNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSK 350 (434)
Q Consensus 273 ~i~l~~p-~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK 350 (434)
+|++.-. +.-.|.. .+++.+++|.++|++||+++|+||++.++ +..+..... ...+ ..|| |+ +|+|
T Consensus 209 Avi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~--GrtG~~~a~----~~~g-v~PD---iv--~~gK 276 (429)
T PRK06173 209 ALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGF--GRTGKLFAL----EHAG-VVPD---IM--CIGK 276 (429)
T ss_pred EEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCC--CcCCcchHH----HhcC-CCCC---EE--Eeeh
Confidence 6666532 5656765 67889999999999999999999999774 322211111 1111 2366 33 3899
Q ss_pred CCCCCCC-ceeEEEEEecCCHHHHHHHHH------HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHH
Q 013892 351 GYYGECG-KRGGYMEVTGFSAEVREQIYK------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 351 ~~~g~~G-~R~G~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
.++ -| +.+|.++. .+++.+.+.. ....+...++++.+++...|+--+. +..+++.++.-+.+.+.|+
T Consensus 277 ~l~--gG~~p~~a~~~---~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~-~~~~~~~~~~g~~l~~~L~ 350 (429)
T PRK06173 277 ALT--GGYLTLSATIT---TEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE-SPWQQNIQRIEAQLKQELA 350 (429)
T ss_pred hhh--CCccccceEEe---cHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHH
Confidence 995 47 47888876 8888887752 1222335667777766666542111 1346666666667777776
Q ss_pred HH
Q 013892 424 RR 425 (434)
Q Consensus 424 ~~ 425 (434)
+.
T Consensus 351 ~~ 352 (429)
T PRK06173 351 PA 352 (429)
T ss_pred Hh
Confidence 53
No 330
>PRK07678 aminotransferase; Validated
Probab=99.23 E-value=3.2e-09 Score=108.60 Aligned_cols=269 Identities=16% Similarity=0.136 Sum_probs=154.8
Q ss_pred CCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
...||+..+ -..-+|++++++.+.+..... ....|.. +....+|+.+.+..+ ..+.+++++++++|
T Consensus 47 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~~-----~~~~~lae~l~~~~~---~~~~v~f~~sGseA 117 (451)
T PRK07678 47 NRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSY-FPLTQSH-----EPAIKLAEKLNEWLG---GEYVIFFSNSGSEA 117 (451)
T ss_pred CEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCc-cccccCC-----HHHHHHHHHHHHhCC---CCCEEEEeCCcHHH
Confidence 345565443 234478899999888876431 0111221 223344554444332 13579999999999
Q ss_pred HHHHHHHHhc------CC-CCEEEEcCCCChhHHHHHHHc-CCe------------EEEEecCCC--CCCCC-----C--
Q 013892 203 VHMMMQLLIR------SE-NDGILCPIPQYPLYSASIALH-GGT------------LVPYYLDEA--TGWGL-----E-- 253 (434)
Q Consensus 203 l~~~l~~l~~------~~-gd~Vlv~~p~y~~~~~~~~~~-g~~------------~~~~~~~~~--~~~~~-----d-- 253 (434)
+..+++.... .+ ..+|+...-+|.+....+... |.. +..++.... ..|+. +
T Consensus 118 ~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (451)
T PRK07678 118 NETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLE 197 (451)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHH
Confidence 9999887531 02 367888888888765433322 211 111211100 00110 1
Q ss_pred -HHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHh
Q 013892 254 -TSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSR 331 (434)
Q Consensus 254 -~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~ 331 (434)
++.+++.++.. .+.++.+|++.-.+.-.|.+ .+.+.+++|.++|++||+++|+||+..+|...+. +..+ .
T Consensus 198 ~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~~~----~ 269 (451)
T PRK07678 198 CVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK--AFGF----M 269 (451)
T ss_pred HHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCch--hHHH----H
Confidence 12244445421 12256566555334335665 5667899999999999999999999998544332 2111 1
Q ss_pred hhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHH-------HhhcccCCchHHHHHHHHHcCCCCC
Q 013892 332 SMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK-------VASVNLCSNISGQILASLVMSPPKV 403 (434)
Q Consensus 332 ~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~q~~~~~~l~~~~~ 403 (434)
.++ ..|| ++ +|+|.++ .| +.+|.+++ .+++.+.+.. ....+.+.++++.+++...|+--+.
T Consensus 270 ~~g-v~PD--iv---t~gK~lg--gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~ 338 (451)
T PRK07678 270 NYG-VKPD--II---TMAKGIT--SAYLPLSATAV---KKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMEN 338 (451)
T ss_pred hcC-CCCC--EE---Eeecccc--cCCcceeEEEE---cHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHh
Confidence 111 3377 23 6799995 37 69999987 8899888753 1334557778888877777653211
Q ss_pred ChHHHHHHHHHHHHHHHHHHHH
Q 013892 404 GDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 404 ~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+...++.++.-+.+.+.|++.
T Consensus 339 -~~~~~~~~~~g~~l~~~l~~~ 359 (451)
T PRK07678 339 -ENLIERSAQLGELLLEQLKEE 359 (451)
T ss_pred -CCHHHHHHHHHHHHHHHHHHH
Confidence 134555555556666666554
No 331
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.22 E-value=9.4e-10 Score=110.20 Aligned_cols=247 Identities=13% Similarity=0.005 Sum_probs=151.6
Q ss_pred CCcccccccCCCCCHH-HHHHHHHHHHcCCCCCCCCCCC--CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcC-ChHHHH
Q 013892 128 PSILDRSETQGLFSAD-SIERAWQILDQIPGRATGAYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTD-GASPAV 203 (434)
Q Consensus 128 p~~l~~~~~~~~~p~~-v~~~~~~~l~~~~~~~~~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~-G~~~al 203 (434)
|..+.|..+|..+|+. |++++.+.+-. .....+ ..-+.+.|+.+++++ |.+ ++++|++++ ++|.++
T Consensus 11 ~~~~~f~~Gp~~~~~~~v~~a~~~~~~~-----~~hr~~~f~~~~~~~r~~l~~l~----~~~-~~~~v~~~~gs~T~~~ 80 (378)
T PRK03080 11 PADPRFSSGPCKKRPGWQLEALADALLG-----RSHRQKPVKALLKRVIEGTRELL----SLP-EGYEVGIVPGSDTGAW 80 (378)
T ss_pred CCCCCcCCCCcCCChHHHHHHHHhhhcc-----cCcCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEECCchHHHH
Confidence 4456677788888888 88887654321 111111 122455666666665 421 345788775 899999
Q ss_pred HHHHHHHhcCC-CCEEEEcCCCChh-HHH-HHHHcCC-eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC
Q 013892 204 HMMMQLLIRSE-NDGILCPIPQYPL-YSA-SIALHGG-TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (434)
Q Consensus 204 ~~~l~~l~~~~-gd~Vlv~~p~y~~-~~~-~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p 279 (434)
..++..++ .+ ++.|++ .-.|+. +.. +.+.+|+ +++.++.+.. ..+|+++++ .++.|.+++.
T Consensus 81 ~~~~~~l~-~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g--~~~d~~~i~-----------~~~~V~~~h~ 145 (378)
T PRK03080 81 EMALWSLL-GARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADYG--SLPDLSAVD-----------FDRDVVFTWN 145 (378)
T ss_pred HHHHHhcC-CCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCC--CCCCHhhcC-----------CCCCEEEEec
Confidence 99999987 54 445555 445554 332 2356788 8888876533 356766532 2456888999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce
Q 013892 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (434)
Q Consensus 280 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R 359 (434)
.|.||..++ +++|++ +++|+++|+|.+..-. .. ...+.. + | +++.|..|.|.|.+|
T Consensus 146 ~t~tG~~~p---i~~I~~--~~~g~~~vVDa~qs~G---~~--pidv~~----i-----D---~~~~s~~K~l~~P~G-- 201 (378)
T PRK03080 146 GTTTGVRVP---VARWIG--ADREGLTICDATSAAF---AL--PLDWSK----L-----D---VYTFSWQKVLGGEGG-- 201 (378)
T ss_pred CCccceecc---chhhcc--ccCCCeEEEecccccc---cC--CCCHHH----C-----c---EEEEehhhhCCCCCc--
Confidence 999999999 777777 7889999999987642 21 122211 1 2 778888998854456
Q ss_pred eEEEEEecCCHHHHHHHHHHh-----------------------h-cccCCchHHHHHHHHHcCCC--C-CChHHHHHHH
Q 013892 360 GGYMEVTGFSAEVREQIYKVA-----------------------S-VNLCSNISGQILASLVMSPP--K-VGDESYESYC 412 (434)
Q Consensus 360 ~G~~~~~~~~~~~~~~l~~~~-----------------------~-~~~~~~~~~q~~~~~~l~~~--~-~~~~~~~~~~ 412 (434)
+|++.+ +++.++++.... . ....++..+..++...++.- . .++...++.+
T Consensus 202 ~g~l~v---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~ 278 (378)
T PRK03080 202 HGMAIL---SPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTA 278 (378)
T ss_pred eEEEEE---CHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 566665 788777654210 0 11123444433323333221 1 2356667777
Q ss_pred HHHHHHHHHHHHHH
Q 013892 413 AERDGILSSLARRA 426 (434)
Q Consensus 413 ~~r~~l~~~L~~~~ 426 (434)
+..+.+++.|++..
T Consensus 279 ~l~~~l~~~l~~~~ 292 (378)
T PRK03080 279 ANASVLYDWAEKTP 292 (378)
T ss_pred HHHHHHHHHHHhCC
Confidence 77777777777654
No 332
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.22 E-value=3.1e-09 Score=109.95 Aligned_cols=200 Identities=12% Similarity=0.095 Sum_probs=136.9
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCC-C---------C-CCCCEEEcCChHHHHHHHHHHHhc---C------------
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGF-P---------A-DPNDIFLTDGASPAVHMMMQLLIR---S------------ 213 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~-~---------~-~~~~i~~t~G~~~al~~~l~~l~~---~------------ 213 (434)
...|..+....++.+.+.+|+.+..+. + . +...-++|+|+|++...++.+... .
T Consensus 118 ~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~g 197 (522)
T TIGR03799 118 LVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREG 197 (522)
T ss_pred cceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhcccccccccccccc
Confidence 344555566788999999999887631 1 0 112357789999988777665321 0
Q ss_pred ----------CCCEEEEcCCCChhHHHHHHHcCC---eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCC
Q 013892 214 ----------ENDGILCPIPQYPLYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (434)
Q Consensus 214 ----------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~ 280 (434)
++..|+++.-.|......++..|. +++.+|++++ +.+|++.|++.|++..++|.++-+|+-+..+
T Consensus 198 l~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~--g~~d~~~L~~~i~~~~~~g~~~~~vvataGt 275 (522)
T TIGR03799 198 LFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDAN--NRIDVDALRDKCAELAEQNIKPLAIVGVAGT 275 (522)
T ss_pred chhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCC--CcCCHHHHHHHHHHHHHCCCCcEEEEEEecC
Confidence 134689999999999999999987 7889998754 5899999999998766665444444444667
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee
Q 013892 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (434)
Q Consensus 281 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~ 360 (434)
+.||.+-+ +++|+++|+++|+++++|.+|++...-. ..+...+..+. .-| .+.-+..|.+.+ -.-+
T Consensus 276 t~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~----~~~r~~l~gle--~aD---Sit~d~HK~l~~--P~g~ 341 (522)
T TIGR03799 276 TETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLS----NTYRHLLKGIE--RAD---SVTIDAHKQLYV--PMGA 341 (522)
T ss_pred cCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhC----HHHHHHhcCch--hCC---EEEEChhhcCCc--Cccc
Confidence 79999988 9999999999999999999998743211 11122222221 123 456689996643 3446
Q ss_pred EEEEEecCCHHHHHHHH
Q 013892 361 GYMEVTGFSAEVREQIY 377 (434)
Q Consensus 361 G~~~~~~~~~~~~~~l~ 377 (434)
|.+.+ .+++..+.+.
T Consensus 342 G~llv--r~~~~~~~~~ 356 (522)
T TIGR03799 342 GMVLF--KDPALMSAIE 356 (522)
T ss_pred EEEEE--eCHHHHHHhc
Confidence 77754 3566655543
No 333
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.22 E-value=2.6e-09 Score=102.05 Aligned_cols=186 Identities=20% Similarity=0.237 Sum_probs=118.3
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHHHHhcCCCCEEEEc-CCCChhHHHHH---
Q 013892 159 ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYSASI--- 232 (434)
Q Consensus 159 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~~~~~~--- 232 (434)
...+|+... .=|+.+.+.+.+-+| .++.++= -.++|+||..++..++ .|||+.+.. -.-|......+
T Consensus 45 ~tTGYGY~D---~GRd~le~iyA~vfg---aE~ALVRpq~vSGTHAi~~~Lfg~L-rpGD~ll~~tG~PYDTL~~VIG~~ 117 (403)
T PF06838_consen 45 GTTGYGYDD---IGRDKLERIYADVFG---AEDALVRPQFVSGTHAIALALFGVL-RPGDELLSITGKPYDTLEEVIGIR 117 (403)
T ss_dssp ---TT-TT----HHHHHHHHHHHHHCT----SEEEEETTS-SHHHHHHHHHHHH---TT-EEEESSSS--CCHHHHHTSS
T ss_pred CCCcCCCCC---ccHHHHHHHHHHHhC---chhhhhcccccchHHHHHHHHHhcC-CCCCeEEEcCCCchhhHHHHhCCC
Confidence 355666532 235555555555555 2333331 2368899999999999 699998854 44466555544
Q ss_pred -------HHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-cCCCCCccCCCHHHHHHHHHHHHHc--
Q 013892 233 -------ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKE-- 302 (434)
Q Consensus 233 -------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~~~~~-- 302 (434)
+..|.....+++.+++ .+|.+.+++++++ ++|+|++. +-+.-+=-.++.++++++++++++.
T Consensus 118 g~~~GSL~e~Gi~Y~~v~L~~dg--~~D~~~i~~~~~~------~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p 189 (403)
T PF06838_consen 118 GNGPGSLKEFGIKYREVPLTEDG--TIDWEAIKKALKP------NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINP 189 (403)
T ss_dssp SSSSSSTGGGT-EEEE--B-TTS--SB-HHHHHHHHHT------TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-T
T ss_pred CCCCCChHHhCceeEEEeecCCC--CcCHHHHHHhhcc------CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 4567889999998764 8899999999997 89999999 5566666678999999999999875
Q ss_pred CCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCc--eeEEEEEecCCHHHHHHHHHH
Q 013892 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK--RGGYMEVTGFSAEVREQIYKV 379 (434)
Q Consensus 303 ~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~--R~G~~~~~~~~~~~~~~l~~~ 379 (434)
++++++|.+|++|+-..+ +. +++ -| ++.+|+-|+..| |+ -+||++. .++++++....
T Consensus 190 ~~iifVDNCYGEFvE~~E--P~-------~vG---AD---l~aGSLIKNpGG--giAptGGYIaG---r~~lVe~~a~R 248 (403)
T PF06838_consen 190 DVIIFVDNCYGEFVETQE--PT-------EVG---AD---LMAGSLIKNPGG--GIAPTGGYIAG---RKDLVERAAYR 248 (403)
T ss_dssp TSEEEEE-TTTTTTSSS---GG-------GGT----S---EEEEETTSGGGT--TT-SS-EEEEE---SHHHHHHHHHH
T ss_pred CeEEEEeCCcceeccccC--cc-------ccc---hh---heeccceeCCCC--CccCcCCEEec---hHHHHHHHHhh
Confidence 789999999999654433 11 222 34 889999999843 54 7899977 89999988654
No 334
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.22 E-value=3.9e-09 Score=108.17 Aligned_cols=277 Identities=14% Similarity=0.057 Sum_probs=155.2
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCC-CCCEEEc-CCh
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD-PNDIFLT-DGA 199 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-~~~i~~t-~G~ 199 (434)
....||+..+ -..-+|.+++++.+++.+... ....+... +.+..+++.+.+....... .+.++++ +++
T Consensus 62 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~~~----~~~~~la~~L~~~~p~~~~~~~~v~f~~~SG 136 (464)
T PRK06938 62 GRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELP-LHTLDLTT----PVKDQFVQDLFASLPEAFAREAKIQFCGPTG 136 (464)
T ss_pred CCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhc-ccccccCC----HHHHHHHHHHHHhCcccccccceEEEeCCCc
Confidence 4456776554 234578899999988864221 01111112 2333444444332111111 1356554 688
Q ss_pred HHHHHHHHHHHhcC-CCCEEEEcCCCChhHHHHHHH-cCC------------eEEEEecCCC--CCCC--------CCHH
Q 013892 200 SPAVHMMMQLLIRS-ENDGILCPIPQYPLYSASIAL-HGG------------TLVPYYLDEA--TGWG--------LETS 255 (434)
Q Consensus 200 ~~al~~~l~~l~~~-~gd~Vlv~~p~y~~~~~~~~~-~g~------------~~~~~~~~~~--~~~~--------~d~~ 255 (434)
++|+..+++....- ...+|+...-+|.+....... .|. .+..++.... ..|+ .+++
T Consensus 137 SEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 216 (464)
T PRK06938 137 TDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLH 216 (464)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHH
Confidence 99999998876422 346788888888876543322 110 1122222110 0111 1256
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~ 334 (434)
.+++.+++......++.+|++.-.+.-.|.+ .+.+.+++|.++|++||+++|+||+..++...+. +..+ ..++
T Consensus 217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~--~~a~----e~~g 290 (464)
T PRK06938 217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGK--MFAF----EHAG 290 (464)
T ss_pred HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcH--HHHH----HhcC
Confidence 6777775422111245555554224435665 4588999999999999999999999999533332 2111 1111
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH-HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK-VASVNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 413 (434)
..|| ++ +++|.++ -|+.+|.++. .+++ +.+.. ....+...++++.+++.+.|+--+. ++..++.++
T Consensus 291 -v~PD--iv---~~gKglg--gG~PlsAv~~---~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~-~~l~~~~~~ 357 (464)
T PRK06938 291 -IIPD--VV---VLSKAIG--GSLPLAVVVY---REWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKE-HRLAEHAAA 357 (464)
T ss_pred -CCCC--EE---Eeecccc--CCCceEEEee---hhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHH-hHHHHHHHH
Confidence 3477 23 5599995 4899999976 5553 44422 1234556788888877777643110 245556666
Q ss_pred HHHHHHHHHHHHHH
Q 013892 414 ERDGILSSLARRAK 427 (434)
Q Consensus 414 ~r~~l~~~L~~~~~ 427 (434)
.-+.+.+.|+++..
T Consensus 358 ~G~~l~~~L~~l~~ 371 (464)
T PRK06938 358 MGERLREHLRQLQR 371 (464)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666677766543
No 335
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.20 E-value=2e-09 Score=106.47 Aligned_cols=245 Identities=11% Similarity=0.068 Sum_probs=162.0
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchH---HHHHHHHHHHHhhcCCCCCCCCEEEcCC-hHHHHHHHHHHHhcCCC
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIK---GLRDTIAAGIEARDGFPADPNDIFLTDG-ASPAVHMMMQLLIRSEN 215 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~---~lr~~ia~~~~~~~g~~~~~~~i~~t~G-~~~al~~~l~~l~~~~g 215 (434)
.|..|++++.+.+......+...|....-.+ ++.+.+.+.+...++.+ +..+|++++| +|.++..++..+. .+|
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~-~~~ 80 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLL-AEG 80 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcC-CCC
Confidence 5888999999988854322233343322223 55555555555555631 2346888776 9999999999998 689
Q ss_pred CEEEEcCCCChh--HHHHHHHcCCeEEEEecCCCCCC--CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHH
Q 013892 216 DGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (434)
Q Consensus 216 d~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~ 291 (434)
++|++..-+..+ +.++++..|+ +..+..++..+| .+++++++. ++ ++++|.+++-.|.||+..+
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~--- 148 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGVEFR--- 148 (349)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccEecc---
Confidence 998877766554 5667888898 777765533223 345565542 22 7899999999999999875
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~ 371 (434)
++++.+++++++|.+-.- +.. ...+.. + + +++.|-.|.| |.+| +|.+.+ +++
T Consensus 149 -----~l~~~~~~l~iVDavss~---g~~--~id~~~----~-----d---~~~~ssqK~l-gP~G--lg~l~~---s~~ 200 (349)
T TIGR01364 149 -----ELPDVKNAPLVADMSSNI---LSR--PIDVSK----F-----G---LIYAGAQKNI-GPAG--LTVVIV---RKD 200 (349)
T ss_pred -----eecccCCCeEEEEccccc---cCc--cCCHHH----c-----c---EEEEeccccc-CCCc--eEEEEE---CHH
Confidence 556668999999998764 221 112211 1 2 7788889998 7788 566655 777
Q ss_pred HHHHHHHH----------h---hcccCCchHHHHHHHHHcCC--CC-CChHHHHHHHHHHHHHHHHHHHHH
Q 013892 372 VREQIYKV----------A---SVNLCSNISGQILASLVMSP--PK-VGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 372 ~~~~l~~~----------~---~~~~~~~~~~q~~~~~~l~~--~~-~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+++++... . .....|+..+-++...+|+. .. .++...+++++..+.+++.|+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~ 271 (349)
T TIGR01364 201 LLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSN 271 (349)
T ss_pred HHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 77655211 1 12346677777666666653 22 367778888888888888888763
No 336
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.20 E-value=9.5e-11 Score=111.03 Aligned_cols=191 Identities=18% Similarity=0.247 Sum_probs=115.2
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC-----CCCEEEEcCCCChhHHHHHHHcCCeEEEEe
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-----ENDGILCPIPQYPLYSASIALHGGTLVPYY 243 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~-----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~ 243 (434)
.++|.+.|.++...--+...+...|++++|+++.+..++-+|... +--.|+...|.|+.|........-....+.
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 467777777765544343444457999999999999999998521 114799999999999987665544444444
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCc
Q 013892 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF 323 (434)
Q Consensus 244 ~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 323 (434)
-+.. .|. +-+ ...+-.=+++.||||.|.. .+.++ +.-+..+|.|-||-.-.|.+-
T Consensus 125 Gda~-~~~-~~~------------~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTpI--- 179 (363)
T PF04864_consen 125 GDAS-NFK-NSD------------NPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTPI--- 179 (363)
T ss_dssp EECC-CGT-T-S-------------CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS-----
T ss_pred ccHH-hhc-cCC------------CCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeeccccccc---
Confidence 3332 232 100 0123344788999999996 34444 344567899999987555432
Q ss_pred cchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcC
Q 013892 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMS 399 (434)
Q Consensus 324 ~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~ 399 (434)
... . +.| |.+.|+||.- |.+|.|+||.++ .++++.+.|.++.. .+.+++.=.|.-+..+|+
T Consensus 180 ---~~~---a---D~D---iMLFT~SK~T-GHAGSR~GWAlV--KD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk 241 (363)
T PF04864_consen 180 ---TAP---A---DHD---IMLFTLSKLT-GHAGSRFGWALV--KDEEVAKKMTKYMELNTIGVSRDSQLRALKILK 241 (363)
T ss_dssp ----S----B-----S---EEEEEHHHHC-S-GGG-EEEEEE--S-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHH
T ss_pred ---CCC---C---CCc---eEEEEEeccc-Cccccccceeee--cCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 111 1 145 8899999975 999999999987 79999999988877 677889888887777775
No 337
>PRK07480 putative aminotransferase; Validated
Probab=99.20 E-value=3.8e-09 Score=108.15 Aligned_cols=261 Identities=15% Similarity=0.130 Sum_probs=149.1
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-----C
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----S 213 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-----~ 213 (434)
.-+|.+++++.++++.... ...+ .....+.+..+|+.+.+..+ ...+.+++++++++|+..+++.... .
T Consensus 66 h~~p~v~~Ai~~q~~~~~~--~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AlklAr~~~~~~g 139 (456)
T PRK07480 66 YGRKELADAAARQMRELPY--YNTF--FKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSEANDTVLRMVRHYWALKG 139 (456)
T ss_pred CCCHHHHHHHHHHHHhcCC--cccc--cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 3478899999998886431 1111 01122344455555544322 2346899999999999999887531 0
Q ss_pred -C-CCEEEEcCCCChhHHHHHHHc-CCe------------EEEEecC--CCCCCCCC--------HHHHHHHHHHHHhcC
Q 013892 214 -E-NDGILCPIPQYPLYSASIALH-GGT------------LVPYYLD--EATGWGLE--------TSEVKKQLEAAKAKG 268 (434)
Q Consensus 214 -~-gd~Vlv~~p~y~~~~~~~~~~-g~~------------~~~~~~~--~~~~~~~d--------~~~l~~~l~~~~~~g 268 (434)
+ ..+|+...-+|.+........ |.. +..++.. ....+..+ ++.|++.+... .+
T Consensus 140 ~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~ 217 (456)
T PRK07480 140 KPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GA 217 (456)
T ss_pred CCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CC
Confidence 2 356888888887654322221 111 0111100 00000111 24444444321 11
Q ss_pred CCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEec
Q 013892 269 ITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQS 347 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S 347 (434)
.++.+|++.-.+.-.|.+ .+.+.+++|.++|++||+++|+||++.+|...+. ...+. .++ ..|| + -+
T Consensus 218 ~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~a~~----~~g-v~PD--i---v~ 285 (456)
T PRK07480 218 DNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGE--WFGSQ----HFG-IKPD--L---MT 285 (456)
T ss_pred CcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc--hhhhh----hcC-CCCC--e---ee
Confidence 256566665434446775 4667899999999999999999999998533332 22211 111 3377 2 36
Q ss_pred CCCCCCCCCCc-eeEEEEEecCCHHHHHHHHH-----HhhcccCCchHHHHHHHHHcCCCCCChHHHHHH-HHHHHHHHH
Q 013892 348 VSKGYYGECGK-RGGYMEVTGFSAEVREQIYK-----VASVNLCSNISGQILASLVMSPPKVGDESYESY-CAERDGILS 420 (434)
Q Consensus 348 ~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~-~~~r~~l~~ 420 (434)
|+|+++ .|. .+|.+++ .+++.+.+.. ....+.+.++++.+++.+.|+--+. +...++. ++.-+.+.+
T Consensus 286 ~gK~l~--gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~-~~l~~~~~~~~g~~l~~ 359 (456)
T PRK07480 286 IAKGLT--SGYIPMGAVGV---GDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRD-EGIVERVRDDTGPYLQK 359 (456)
T ss_pred eehhhc--cCCccceEEEE---cHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHH
Confidence 799995 374 8999987 8888887731 1234557788888888777753211 1344555 355566666
Q ss_pred HHHHH
Q 013892 421 SLARR 425 (434)
Q Consensus 421 ~L~~~ 425 (434)
.|++.
T Consensus 360 ~l~~l 364 (456)
T PRK07480 360 RLREL 364 (456)
T ss_pred HHHHh
Confidence 66653
No 338
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.20 E-value=1.6e-09 Score=107.68 Aligned_cols=254 Identities=13% Similarity=0.074 Sum_probs=160.2
Q ss_pred cccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcc---hHHHHHHHHHHHHhhcCCCCCCCCEEEc-CChHHHHHHHH
Q 013892 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQG---IKGLRDTIAAGIEARDGFPADPNDIFLT-DGASPAVHMMM 207 (434)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G---~~~lr~~ia~~~~~~~g~~~~~~~i~~t-~G~~~al~~~l 207 (434)
-|+.+|...|+.|++++.+.+.+....+.+.+....- ..++.+.+.+.+.+.++.+ +..+++++ ++++.++..++
T Consensus 6 l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~~ 84 (360)
T PRK05355 6 NFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMVP 84 (360)
T ss_pred eccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHHH
Confidence 4566677899999999988775432112223322211 2244444455555545532 22345554 67788899999
Q ss_pred HHHhcCCCCEEEEcCCCChh--HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHH-HHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 208 QLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKK-QLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 208 ~~l~~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
..++ .+|+++++..-+..+ +...++.+|.. ..+..+...++ .+..++++ .+++ ++++|.+++-.+.||
T Consensus 85 ~nl~-~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-~~~~~~~~~~l~~------~~~~V~~th~eTstG 155 (360)
T PRK05355 85 MNLL-GGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-TYIPPLDEWQLSD------DAAYVHYTSNETIDG 155 (360)
T ss_pred HhcC-CCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-CCCCChhhccCCC------CCCEEEEccCCCcce
Confidence 9998 688888877766554 45577788865 55554432222 23333434 5544 689999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEE
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~ 364 (434)
+..+ ++.+| +|+++|+|.+-.- +.. ...+. .+ + +++.|-.|.| |.+| +|.+.
T Consensus 156 v~~~--~i~~i------~g~l~vVDavss~---g~~--~idv~----~~-----d---~~~~ssqK~l-gP~G--lg~l~ 207 (360)
T PRK05355 156 TEFH--ELPDT------GDVPLVADMSSDI---LSR--PIDVS----KF-----G---LIYAGAQKNI-GPAG--LTIVI 207 (360)
T ss_pred EecC--ccccc------CCCcEEEEcCccc---cCc--cCCHH----Hc-----c---EEEEeccccc-cCCc--eEEEE
Confidence 9984 25555 8999999998764 222 11111 11 2 7778889998 7777 46665
Q ss_pred EecCCHHHHHHHHH-H----------h--hcccCCchHHHHHHHHHcCCC--C-CChHHHHHHHHHHHHHHHHHHHHH
Q 013892 365 VTGFSAEVREQIYK-V----------A--SVNLCSNISGQILASLVMSPP--K-VGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 365 ~~~~~~~~~~~l~~-~----------~--~~~~~~~~~~q~~~~~~l~~~--~-~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+ ++++++++.. . . .....|+...-+++..+|+.- . .++...+++++..+.+++.|+++.
T Consensus 208 ~---s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~ 282 (360)
T PRK05355 208 V---REDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSD 282 (360)
T ss_pred E---CHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5 7777766543 1 1 134567777777766666532 2 356777888888888888888764
No 339
>PRK07483 hypothetical protein; Provisional
Probab=99.19 E-value=4.7e-09 Score=107.10 Aligned_cols=259 Identities=16% Similarity=0.139 Sum_probs=151.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC-----
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS----- 213 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~----- 213 (434)
.-+|.+++++.+.+.+........|. .+....+++.+..... ...+.+++++++++|+..+++....-
T Consensus 46 h~~p~v~~av~~ql~~~~~~~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~~~~~g 118 (443)
T PRK07483 46 HSHPRVIAAIHAQIDRLAYAHTSFFT-----TEPAEALADRLVAAAP--AGLEHVYFVSGGSEAVEAALKLARQYFVEIG 118 (443)
T ss_pred CCCHHHHHHHHHHHHhccCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcC
Confidence 45788999999988864210011121 2334455555544322 22368999999999999998875411
Q ss_pred -CC-CEEEEcCCCChhHHHHHHH-cCCe------------EEEEecCCCCCCCC-----C--------HHHHHHHHHHHH
Q 013892 214 -EN-DGILCPIPQYPLYSASIAL-HGGT------------LVPYYLDEATGWGL-----E--------TSEVKKQLEAAK 265 (434)
Q Consensus 214 -~g-d~Vlv~~p~y~~~~~~~~~-~g~~------------~~~~~~~~~~~~~~-----d--------~~~l~~~l~~~~ 265 (434)
++ .+|+...-+|.+....... .|-. +..++... .|.. + ++.+++.+...
T Consensus 119 ~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 195 (443)
T PRK07483 119 QPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCY--AYREQRAGESDEAYGQRLADELEAKILEL- 195 (443)
T ss_pred CCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCc--cccccccCCCHHHHHHHHHHHHHHHHHhc-
Confidence 23 5788888888776433222 1110 11111110 0110 0 24455544321
Q ss_pred hcCCCeeEEEEecCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEE
Q 013892 266 AKGITVRALVVINPGN-PTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLV 343 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~N-PtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i 343 (434)
...++.+|++.-.+- -.|. ..+++.+++|.++|++||+++|+||+..++...+. +..+ ..++ ..|| ++
T Consensus 196 -~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~--~~a~----~~~g-v~PD--iv 265 (443)
T PRK07483 196 -GPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGT--LFAC----EEDG-VAPD--LV 265 (443)
T ss_pred -CCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcH--HHHH----hhcC-CCCC--ee
Confidence 112455666553332 2354 55678999999999999999999999998543332 2211 1111 3377 23
Q ss_pred EEecCCCCCCCCCCc-eeEEEEEecCCHHHHHHHHHH-----hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHH
Q 013892 344 SFQSVSKGYYGECGK-RGGYMEVTGFSAEVREQIYKV-----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (434)
Q Consensus 344 ~i~S~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 417 (434)
+++|.++ .|. .+|.+++ .+++.+.+..- ...+...++++.+++.+.|+--+. +...++.++.-+.
T Consensus 266 ---~~gK~l~--gG~~Pi~av~~---~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~-~~l~~~~~~~g~~ 336 (443)
T PRK07483 266 ---TIAKGLG--AGYQPIGAVLA---SDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE-DGLLANVRARGEQ 336 (443)
T ss_pred ---eehhhhc--cCccccEEEEE---cHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHH
Confidence 5699995 485 9999987 88888877531 234556788887777777643211 2456666666677
Q ss_pred HHHHHHHHH
Q 013892 418 ILSSLARRA 426 (434)
Q Consensus 418 l~~~L~~~~ 426 (434)
+.+.|++..
T Consensus 337 l~~~L~~l~ 345 (443)
T PRK07483 337 LRARLRERL 345 (443)
T ss_pred HHHHHHHHH
Confidence 777776653
No 340
>PRK06149 hypothetical protein; Provisional
Probab=99.19 E-value=5.5e-09 Score=116.26 Aligned_cols=275 Identities=17% Similarity=0.178 Sum_probs=158.9
Q ss_pred CCCccccccc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 127 HPSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 127 ~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
....||+..+ -..-+|++++++.+.+..... ...|. .....+|.+.+++.+ +-..+.+++++++++|+
T Consensus 584 G~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~--~~~~~-~~~~~elae~L~~~~------p~~~~~v~f~~SGsEA~ 654 (972)
T PRK06149 584 GRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNT--NSRFH-YAAVAEFSERLAALA------PDGLDTVFLVNSGSEAN 654 (972)
T ss_pred CCEEEECCCCccccCCCCHHHHHHHHHHHHhccc--ccccc-CHHHHHHHHHHHHhC------CCCcCEEEEeCCchHHH
Confidence 3446666554 223578899999888876432 22231 112334444444433 11236899999999999
Q ss_pred HHHHHHHhc-CCCCEEEEcCCCChhHHHHHH-HcCC-------------eEEEEecCC--CCCCC-CC-----HHHHHHH
Q 013892 204 HMMMQLLIR-SENDGILCPIPQYPLYSASIA-LHGG-------------TLVPYYLDE--ATGWG-LE-----TSEVKKQ 260 (434)
Q Consensus 204 ~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~-~~g~-------------~~~~~~~~~--~~~~~-~d-----~~~l~~~ 260 (434)
..+++.... ....+|+...-+|.+...... ..+. .+..++... ...|. .+ .+++++.
T Consensus 655 e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 734 (972)
T PRK06149 655 DLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQ 734 (972)
T ss_pred HHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHH
Confidence 999985431 234678888888876443221 1110 011221111 01122 12 3455555
Q ss_pred HHHHHhcCCCeeEEEEecC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCC
Q 013892 261 LEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKD 339 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~~p-~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~ 339 (434)
++.....+.++.+|++.-. ++-.....+++.+++|.++|++||+++|+||++.++...+. .+..+ ..++ ..||
T Consensus 735 l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~-~~~a~----e~~g-v~PD 808 (972)
T PRK06149 735 LEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGH-YFWGF----EQQG-VVPD 808 (972)
T ss_pred HHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCc-cchhh----hhcC-CCCC
Confidence 5543333335555555422 44334567788899999999999999999999988533332 12222 1111 2367
Q ss_pred ceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH--hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHH
Q 013892 340 ISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV--ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (434)
Q Consensus 340 ~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 417 (434)
++ +|+|+++ -|..+|.+++ .+++++.+... ...+.+.++++.+++.+.|+--+. +...+..++.-+.
T Consensus 809 --iv---t~gK~lg--~G~Pl~av~~---~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~-e~l~~~~~~~G~~ 877 (972)
T PRK06149 809 --II---TMAKGMG--NGHPLGAVIT---RREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE-EKLQENARRVGDH 877 (972)
T ss_pred --EE---Eeccccc--CCeeeEEEEE---cHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHH
Confidence 23 7899994 5899999987 88988887531 112336677777777766642110 1355556666667
Q ss_pred HHHHHHHHHH
Q 013892 418 ILSSLARRAK 427 (434)
Q Consensus 418 l~~~L~~~~~ 427 (434)
+.+.|++...
T Consensus 878 l~~~L~~l~~ 887 (972)
T PRK06149 878 LKARLEALAD 887 (972)
T ss_pred HHHHHHHHHH
Confidence 7777776543
No 341
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.18 E-value=1.4e-09 Score=104.64 Aligned_cols=258 Identities=14% Similarity=0.095 Sum_probs=162.1
Q ss_pred CCHHHHHHHHHHHHcCCC---CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC
Q 013892 140 FSADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~---~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd 216 (434)
.++.|+++.-..+.+-.. .+..-|+-..=..++.+...+...+.+| ++--++--.+|++ |...++.+|+ +|||
T Consensus 38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg--a~~anVQPhSGs~-AN~av~~All-~pGD 113 (413)
T COG0112 38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG--AEYANVQPHSGSQ-ANQAVYLALL-QPGD 113 (413)
T ss_pred CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC--CCccccCCCCchH-HHHHHHHHHc-CCCC
Confidence 477788887666654321 1122233333344555555555655566 3444666667665 5555566776 7999
Q ss_pred EEEEcCCCChhHHHHH---HHcC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHH
Q 013892 217 GILCPIPQYPLYSASI---ALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (434)
Q Consensus 217 ~Vlv~~p~y~~~~~~~---~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~ 291 (434)
+|+-.+-.+.++..-- ...| .+.+.|+++.+ +..+|.|++++...+. ++|+|+.-.-..| ..+ +
T Consensus 114 timgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~-----kPK~ii~G~SaY~--r~i---d 182 (413)
T COG0112 114 TIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEV-----KPKLIIAGGSAYS--RPI---D 182 (413)
T ss_pred eEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHh-----CCCEEEECccccc--ccc---C
Confidence 9999888777664322 1112 46788888865 4589999999999887 8999885432222 122 4
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCC-ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQEN-VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~~~-~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~ 370 (434)
++++.++|.+-|.++++|.+|-.. +-++. +++.. + +.| |+..|..|+| .|=|+|.+.+ .++
T Consensus 183 ~~~~reIad~VGA~L~~DmAHiaGLVA~G~--~p~P~---~-----~Ad---vVTtTTHKTl---rGPrGG~Il~--~~e 244 (413)
T COG0112 183 FKRFREIADEVGAYLMVDMAHVAGLIAGGV--HPNPL---P-----HAD---VVTTTTHKTL---RGPRGGIILT--NDE 244 (413)
T ss_pred HHHHHHHHHHhCceEEehHHHHHHHHhccc--CCCCC---C-----ccc---eEeCCcccCC---CCCCceEEEe--ccH
Confidence 899999999999999999998543 33332 33221 1 123 8899999998 5999999976 246
Q ss_pred HHHHHHHHHhhcccCCchHHHHHHHHHcC---CCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013892 371 EVREQIYKVASVNLCSNISGQILASLVMS---PPKV-GDESYESYCAERDGILSSLARRAKANI 430 (434)
Q Consensus 371 ~~~~~l~~~~~~~~~~~~~~q~~~~~~l~---~~~~-~~~~~~~~~~~r~~l~~~L~~~~~~~~ 430 (434)
++.+.+.+..-......++.-.++..++. ..+. .++..++..++.+.|.+.|.+++.+++
T Consensus 245 el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vv 308 (413)
T COG0112 245 ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVV 308 (413)
T ss_pred HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEe
Confidence 88888877543222222222222222111 1122 256667888888999998888765443
No 342
>PRK07036 hypothetical protein; Provisional
Probab=99.18 E-value=7.2e-09 Score=106.35 Aligned_cols=274 Identities=15% Similarity=0.141 Sum_probs=159.0
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|.+.+++.+++..... ...+.. -..+.+..+|+.+.+.. +...+.+++++++++
T Consensus 50 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~--~~~~~~--~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGse 123 (466)
T PRK07036 50 GRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPY--YTPFGD--MTNAPAAELAAKLAELA--PGDLNHVFLTTGGST 123 (466)
T ss_pred CCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcc--cccccc--cCCHHHHHHHHHHHHhC--CCCcCEEEEeCCchH
Confidence 3345665544 234478899999888876321 111210 11234455555555432 223468999999999
Q ss_pred HHHHHHHHHhc-----C-C-CCEEEEcCCCChhHHHHHHHcCCe-------------EEEEecCC--CCCCCCC------
Q 013892 202 AVHMMMQLLIR-----S-E-NDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDE--ATGWGLE------ 253 (434)
Q Consensus 202 al~~~l~~l~~-----~-~-gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~~~~~~--~~~~~~d------ 253 (434)
|+..+++.... . + ..+|+...-+|.+....+...... +..++... ...++..
T Consensus 124 Ave~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 203 (466)
T PRK07036 124 AVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCD 203 (466)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHH
Confidence 99999887531 1 1 367888888888765433222111 12222111 0011221
Q ss_pred --HHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHH
Q 013892 254 --TSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVS 330 (434)
Q Consensus 254 --~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~ 330 (434)
++.+++.+... .+.++.+|++.-.+.-.|.+ .+++.+++|.++|++||+++|+||+..++...+. +..+ .
T Consensus 204 ~~~~~~~~~i~~~--~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~~~---~ 276 (466)
T PRK07036 204 FLVDEFEDKILSL--GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGH--FFAS---E 276 (466)
T ss_pred HHHHHHHHHHHHc--CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCch--hhhh---h
Confidence 23344444321 12256566665445556765 5677899999999999999999999988533322 1111 1
Q ss_pred hhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHH--------hhcccCCchHHHHHHHHHcCCC
Q 013892 331 RSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV--------ASVNLCSNISGQILASLVMSPP 401 (434)
Q Consensus 331 ~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~ 401 (434)
..++ ..|| ++ +++|+++ .| +.+|.+++ .+++.+.+... ...+...++++.+++...|+.-
T Consensus 277 ~~~g-v~PD--iv---t~gK~l~--gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i 345 (466)
T PRK07036 277 AVFG-IQPD--II---TFAKGLT--SGYQPLGAVII---SERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIM 345 (466)
T ss_pred hhcC-CCCC--EE---EEccccc--cCccccEEEEE---cHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHH
Confidence 0111 3377 22 6799995 48 58999987 88998887531 2234466788877777766432
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 402 KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 402 ~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+. ++..+...+.-+.+.+.|++.
T Consensus 346 ~~-~~l~~~~~~~g~~l~~~L~~l 368 (466)
T PRK07036 346 ER-EGLCEHVREVGPYFEERLASL 368 (466)
T ss_pred Hh-CCHHHHHHHHHHHHHHHHHHh
Confidence 11 246666777777777777654
No 343
>PRK06148 hypothetical protein; Provisional
Probab=99.16 E-value=6.2e-09 Score=116.02 Aligned_cols=275 Identities=16% Similarity=0.101 Sum_probs=162.8
Q ss_pred CCCccccccc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 127 HPSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 127 ~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
....||+..+ -..-+|.+.+++.+++..... ...|.. +....+|+.+.+... ...+.+++++++++|+
T Consensus 623 G~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~--~~~~~~-----~~~~~lAe~L~~~~p--~~~~~v~f~nSGsEA~ 693 (1013)
T PRK06148 623 GRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNT--NTRYLH-----DAIVAYAERLTATLP--DGLTVAFFVNSGSEAN 693 (1013)
T ss_pred CCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCC--cCCcCC-----HHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHH
Confidence 4446666544 334578899999998876432 223322 233444444443322 2236789999999999
Q ss_pred HHHHHHHhcC-CCCEEEEcCCCChhHHHHHHHc-C-------C-----eEEEEecC--CCCCCCC-C-------HHHHHH
Q 013892 204 HMMMQLLIRS-ENDGILCPIPQYPLYSASIALH-G-------G-----TLVPYYLD--EATGWGL-E-------TSEVKK 259 (434)
Q Consensus 204 ~~~l~~l~~~-~gd~Vlv~~p~y~~~~~~~~~~-g-------~-----~~~~~~~~--~~~~~~~-d-------~~~l~~ 259 (434)
..+++....- ...+|+...-+|.+........ | . .+..++.. ....|+. + .+.+++
T Consensus 694 e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~ 773 (1013)
T PRK06148 694 SLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAE 773 (1013)
T ss_pred HHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHH
Confidence 9999876422 3467888888887654322211 1 0 01111100 0011221 1 134555
Q ss_pred HHHHHHhcCCCeeEEEEecCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCC
Q 013892 260 QLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (434)
Q Consensus 260 ~l~~~~~~g~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~ 338 (434)
.++.....+.++.+|++.-...-.|. ..+++.+++|.++|+++|+++|+||+..++...+.. +..+. ..+ ..|
T Consensus 774 ~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~-~~a~e----~~g-v~P 847 (1013)
T PRK06148 774 QIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSH-WWAFE----TQG-VVP 847 (1013)
T ss_pred HHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCc-chhhh----hcC-CCc
Confidence 55433222335666665533332454 557789999999999999999999999985333321 12211 111 337
Q ss_pred CceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH--hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV--ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 339 ~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
| + -+++|.++ -|..+|.+++ .+++++.+..- ...+.+.++++.+++...|+--+. +...+..++.-+
T Consensus 848 D--i---vt~gK~lg--gG~Plgav~~---~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~-e~l~~~~~~~G~ 916 (1013)
T PRK06148 848 D--I---VTMGKPIG--NGHPMGAVVT---TREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED-EDLQRNALEIGN 916 (1013)
T ss_pred c--e---eeeccccc--CCcceEEEEE---cHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Confidence 7 2 36799995 5999999987 88988877532 224556788887777776653211 245666777777
Q ss_pred HHHHHHHHHHH
Q 013892 417 GILSSLARRAK 427 (434)
Q Consensus 417 ~l~~~L~~~~~ 427 (434)
.+.+.|++...
T Consensus 917 ~l~~~L~~l~~ 927 (1013)
T PRK06148 917 YLLAGLRELQD 927 (1013)
T ss_pred HHHHHHHHHHH
Confidence 77777776643
No 344
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.16 E-value=6e-09 Score=106.90 Aligned_cols=248 Identities=14% Similarity=0.089 Sum_probs=146.5
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCC---CCCCCEEEcCC
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP---ADPNDIFLTDG 198 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~---~~~~~i~~t~G 198 (434)
...+||+..+ -..-+|.+.+++.+.+..........|. .+.+..+++.+.+..... .+.+.++++++
T Consensus 63 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~-----~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~s 137 (472)
T PRK08742 63 GRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFT-----HEPAVQLAEQLLAIAPRQDGRAPLSKVFYADN 137 (472)
T ss_pred CCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccC-----CHHHHHHHHHHHHhCCCcccCCCCCEEEEeCC
Confidence 3345666544 2345778999988888753210111222 123445555554432210 12358999999
Q ss_pred hHHHHHHHHHHHhcC------C-CCEEEEcCCCChhHHHHHHHcCCe-------------EEEEecCCC--CCCCC----
Q 013892 199 ASPAVHMMMQLLIRS------E-NDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEA--TGWGL---- 252 (434)
Q Consensus 199 ~~~al~~~l~~l~~~------~-gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~--~~~~~---- 252 (434)
+++|+..+++....- + ..+|+...-+|.+........+.. +..++.... ..++.
T Consensus 138 GSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~ 217 (472)
T PRK08742 138 GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAED 217 (472)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHH
Confidence 999999998876310 2 368999998888765433332211 111111100 01111
Q ss_pred ----CHHHHHHHHHHHHhcCCCeeEEEEec-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccch
Q 013892 253 ----ETSEVKKQLEAAKAKGITVRALVVIN-PGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSF 326 (434)
Q Consensus 253 ----d~~~l~~~l~~~~~~g~~~~~i~l~~-p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~ 326 (434)
+++.+++.++. .+.++.+|++.- .++-.|. ..+++.+++|.++|+++|+++|+||+..++...+. +..+
T Consensus 218 ~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~--~~a~ 292 (472)
T PRK08742 218 YALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGT--LFAC 292 (472)
T ss_pred HHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--chHH
Confidence 24555555542 122565555553 2555676 45678999999999999999999999999654443 2222
Q ss_pred HHHHhhhCCCCCCceEEEEecCCCCCCCCCCc-eeEEEEEecCCHHHHHHHHH-------HhhcccCCchHHHHHHHHHc
Q 013892 327 KKVSRSMGYGEKDISLVSFQSVSKGYYGECGK-RGGYMEVTGFSAEVREQIYK-------VASVNLCSNISGQILASLVM 398 (434)
Q Consensus 327 ~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~q~~~~~~l 398 (434)
. .+ ...|| ++ +++|.++ -|. .+|.+++ .+++.+.+.. ....+.+.++++.+++...|
T Consensus 293 e----~~-gv~PD--iv---~~gKgl~--gG~~Plaav~~---~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L 357 (472)
T PRK08742 293 E----QA-GVMPD--LL---CLSKGLT--GGFLPLSAVLA---TQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATL 357 (472)
T ss_pred H----hc-CCCCC--EE---EEccccc--CCCCCcceeec---cHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHH
Confidence 1 11 13477 23 5599995 484 8999877 8888887742 12344567888877777766
Q ss_pred C
Q 013892 399 S 399 (434)
Q Consensus 399 ~ 399 (434)
+
T Consensus 358 ~ 358 (472)
T PRK08742 358 D 358 (472)
T ss_pred H
Confidence 4
No 345
>PLN02263 serine decarboxylase
Probab=99.14 E-value=3.1e-08 Score=100.15 Aligned_cols=179 Identities=9% Similarity=-0.067 Sum_probs=130.6
Q ss_pred chHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCC
Q 013892 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDE 246 (434)
Q Consensus 168 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~ 246 (434)
+..++.+.+-+|+.+.+|.+-+...=++|+|+|+++...+.+... .+...|++++-.|..+..+++.+|.+++.+|.++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~ 209 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLV 209 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCC
Confidence 568899999999999888643222358899999999888777641 1345789999999999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCC-----EEEEccCCCCCccCCCC
Q 013892 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL-----VLLADEVYQENVYVPEK 321 (434)
Q Consensus 247 ~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~-----~li~Deay~~~~~~~~~ 321 (434)
++.+|+++|+++|++. ..++-+|+.+-++.++|.+=+ +++|.++|+++|+ |+.+|.+|++++..-..
T Consensus 210 --~g~mD~~aL~~aI~~d---~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~ 281 (470)
T PLN02263 210 --SGEIDCADFKAKLLAN---KDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVK 281 (470)
T ss_pred --CCcCcHHHHHHHHHhC---CCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcc
Confidence 4699999999999762 113445556677889999966 9999999999997 99999999987542110
Q ss_pred CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 322 ~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
.. +.++...+ +.-| .-+..|.+ ..-.-.|.+..
T Consensus 282 ~~-------~~~df~~~-vDSI-svD~HK~l--~~P~~cgvll~ 314 (470)
T PLN02263 282 RA-------PKVTFKKP-IGSV-SVSGHKFV--GCPMPCGVQIT 314 (470)
T ss_pred cc-------cccCCCcC-ccEE-EECCcccc--CCCcCEEEEEE
Confidence 00 00110001 2223 34789965 36788888876
No 346
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.13 E-value=1.1e-08 Score=95.27 Aligned_cols=257 Identities=14% Similarity=0.085 Sum_probs=169.2
Q ss_pred cccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh
Q 013892 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 211 (434)
-|.-+|..+|..+++++... ..+|..+. ...+-+.+-+-++.-+. ..++.-.++...++.++..++..++
T Consensus 20 L~gPGPsnl~~~V~~A~~~~--------~lgh~sPe-~~qIm~~v~egikyVFk-T~n~~tf~isgsGh~g~E~al~N~l 89 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSRP--------SLGHMSPE-FVQIMDEVLEGIKYVFK-TANAQTFVISGSGHSGWEAALVNLL 89 (385)
T ss_pred eecCCCcCCCHHHHHhhcCC--------ccccCCHH-HHHHHHHHHHHHHHHhc-cCCCceEEEecCCcchHHHHHHhhc
Confidence 34445666788777764321 33444433 44444444443333232 1233456667777899999999998
Q ss_pred cCCCCEEEEcC-CCCh-hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH
Q 013892 212 RSENDGILCPI-PQYP-LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (434)
Q Consensus 212 ~~~gd~Vlv~~-p~y~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~ 289 (434)
.|||.|++.. -.|. .+.+..+.+|+++..++.+... ...++++.+++..+ +++++++++...-||+.-+
T Consensus 90 -ePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~--~~~le~i~~~lsqh-----~p~~vfv~hgdsSTgV~q~- 160 (385)
T KOG2862|consen 90 -EPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQ--AVPLEEITEKLSQH-----KPKAVFVTHGDSSTGVLQD- 160 (385)
T ss_pred -CCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCccc--CccHHHHHHHHHhc-----CCceEEEEecCccccccch-
Confidence 7999988766 4454 3677889999999999876543 67899999999887 8999999999888999865
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC
Q 013892 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (434)
Q Consensus 290 ~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~ 369 (434)
-++.+-++|++|++++++|.+-+- ++. +| .|++. .+.+.+.+| -|.+++-+|+-+ +. ++
T Consensus 161 -~~~~~g~lc~k~~~lllVD~VaSl---ggt-~F--------~mDew--gVDvaytgS-QKaL~aP~GLsi--is---fS 219 (385)
T KOG2862|consen 161 -LLAISGELCHKHEALLLVDTVASL---GGT-EF--------EMDEW--GVDVAYTGS-QKALGAPAGLSI--IS---FS 219 (385)
T ss_pred -HHHHHHHHhhcCCeEEEEechhhc---CCc-cc--------eehhh--cccEEEecc-hhhcCCCCCcce--ee---cC
Confidence 356667889999999999998763 322 12 12221 223455554 799976667655 43 37
Q ss_pred HHHHHHHHHHhh------------------------cccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHH
Q 013892 370 AEVREQIYKVAS------------------------VNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 370 ~~~~~~l~~~~~------------------------~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
+...+++++..+ ....+|....+....+|.. ++-+++..+++++..+.++..|+
T Consensus 220 ~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~ 299 (385)
T KOG2862|consen 220 DKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLE 299 (385)
T ss_pred HHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777764311 1123444444545555543 24467888888888899998888
Q ss_pred HHHHH
Q 013892 424 RRAKA 428 (434)
Q Consensus 424 ~~~~~ 428 (434)
+.+.+
T Consensus 300 ~~GLq 304 (385)
T KOG2862|consen 300 ALGLQ 304 (385)
T ss_pred HhCcc
Confidence 86543
No 347
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.13 E-value=2.1e-08 Score=102.71 Aligned_cols=276 Identities=13% Similarity=0.047 Sum_probs=155.3
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGAS 200 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~ 200 (434)
....||+..+ -..-+|++.+++.+.+..... ....+. ..+.+..+|+.+.+....... ...++++++++
T Consensus 57 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~-~~~~~~----~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGs 131 (459)
T PRK06931 57 GNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLP-LHTLDL----TTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGA 131 (459)
T ss_pred CCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcc-cccccc----CCHHHHHHHHHHHHhCCCccccceEEEeCCCcH
Confidence 3446676555 234578899999888865211 011111 124455566666544321100 12346668889
Q ss_pred HHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCe-------------EEEEecCCC--CCCC----CCHHHHHHH
Q 013892 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEA--TGWG----LETSEVKKQ 260 (434)
Q Consensus 201 ~al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~--~~~~----~d~~~l~~~ 260 (434)
+|+..+++.... ...++|+...-+|.+........... +..++.... ..|+ -+.+.+++.
T Consensus 132 EAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (459)
T PRK06931 132 DAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYY 211 (459)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHH
Confidence 999999887542 23468998898888776554422111 122221110 0011 123444333
Q ss_pred HHHHHh----cCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 261 LEAAKA----KGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 261 l~~~~~----~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+++... ...++.+|++.-.+.-.|.+ .+.+.+++|.++|++||+++|+||+..++...+. +..+ ..++
T Consensus 212 ~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~--~~a~----~~~g- 284 (459)
T PRK06931 212 FENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGK--MFAF----EHAG- 284 (459)
T ss_pred HHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCch--HHHh----hhcC-
Confidence 333221 12245555554223335654 5678999999999999999999999999543332 2111 1111
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH-hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 414 (434)
..|| ++ +++|.++ .|+.+|.++. .++ ++.+... ...+...++++.+++.+.|+--+. +...++.++.
T Consensus 285 v~PD--iv---t~gK~l~--gG~Pi~av~~---~~~-~~~~~~~~~~~T~~gnpla~aaala~L~~l~~-~~l~~~~~~~ 352 (459)
T PRK06931 285 IEPD--II---VMSKAVG--GGLPLAVLGI---KKE-FDAWQPGGHTGTFRGNQLAMATGLTTLKILKE-ENLAQNAAER 352 (459)
T ss_pred CCCC--EE---Eeccccc--CCcceeeeee---HHH-HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHH
Confidence 3477 23 5699995 4899998765 444 3554321 234556788888877777653111 2455666666
Q ss_pred HHHHHHHHHHHH
Q 013892 415 RDGILSSLARRA 426 (434)
Q Consensus 415 r~~l~~~L~~~~ 426 (434)
-+.+.+.|++..
T Consensus 353 G~~l~~~L~~l~ 364 (459)
T PRK06931 353 GEWLKAQLAELQ 364 (459)
T ss_pred HHHHHHHHHHHH
Confidence 777777777654
No 348
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.13 E-value=1.1e-08 Score=102.10 Aligned_cols=196 Identities=16% Similarity=0.141 Sum_probs=134.9
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCC-----CCCEEEcCChHHHHHHHHHHHhc-------CCC------CEEEEc
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPAD-----PNDIFLTDGASPAVHMMMQLLIR-------SEN------DGILCP 221 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~l~~l~~-------~~g------d~Vlv~ 221 (434)
...|.......++.+.+.+|+.+.+|.+.+ ...=++|+|+++++...+.+... ..| -.|+++
T Consensus 68 ~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s 147 (373)
T PF00282_consen 68 GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVS 147 (373)
T ss_dssp TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccc
Confidence 344555556788999999999999997721 23568999999999877755421 011 267888
Q ss_pred CCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH
Q 013892 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 222 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
+-.|.....++..+|..++.+++++ ++.+|+++|+++|++..++|..+-+|+.+-....||.+ +++++|.++|++
T Consensus 148 ~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~---D~l~~i~~i~~~ 222 (373)
T PF00282_consen 148 EQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI---DPLEEIADICEK 222 (373)
T ss_dssp TTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB----SHHHHHHHHHH
T ss_pred cccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccc---cCHHHHhhhccc
Confidence 8899999999999999999999987 45899999999999877777445466666778889998 459999999999
Q ss_pred cCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHH
Q 013892 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (434)
Q Consensus 302 ~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 373 (434)
+++|+.+|.+|++..+-.+. ... ....+. .+.-| .-++.|.+ + .-...|++.. .++...
T Consensus 223 ~~~wlHVDaA~gg~~~~~~~-~~~---~~~gi~----~adSi-t~d~HK~l-~-~P~~~~~~l~--r~~~~l 281 (373)
T PF00282_consen 223 YNIWLHVDAAYGGSALLSPE-YRH---LLFGIE----RADSI-TIDPHKWL-G-VPYGCGVLLV--RDKSDL 281 (373)
T ss_dssp CT-EEEEEETTGGGGGGHCT-TGG---GGTTGG----GESEE-EEETTTTT-S--SSS-EEEEE--SSGGGH
T ss_pred cceeeeeccccccccccccc-ccc---cccccc----ccccc-ccchhhhh-c-CCccceeEEe--ecccch
Confidence 99999999999994332110 111 112111 11123 34789977 4 5677888875 355543
No 349
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.12 E-value=2.8e-09 Score=105.66 Aligned_cols=232 Identities=16% Similarity=0.104 Sum_probs=138.5
Q ss_pred cchHHHHHHHHHHHHhhcCCCCCCCCE---EEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH-----H-----H
Q 013892 167 QGIKGLRDTIAAGIEARDGFPADPNDI---FLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS-----I-----A 233 (434)
Q Consensus 167 ~G~~~lr~~ia~~~~~~~g~~~~~~~i---~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~-----~-----~ 233 (434)
.-+.++.+...+...+.+|. ++++. +=..+++.|...++.+|+ +|||+|+..++...++... . .
T Consensus 62 ~~id~iE~la~~ra~~lF~~--~~~~w~anvqp~SGs~An~av~~aLl-~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~ 138 (399)
T PF00464_consen 62 EYIDEIEELAIERAKELFGA--EPKEWYANVQPHSGSQANLAVYMALL-KPGDTIMGLSLPHGGHLSHGSSVNFKKISAS 138 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHT---STTTEEEE---SSHHHHHHHHHHHHT--TT-EEEEEEGGGT--GGGT-TTSHSBSSHH
T ss_pred chhhHHHHHHHHHHHHHhCC--CcccceEEeecCCchHHHHHHHHHHH-hhcCcEEecChhhcccccccccccccccccc
Confidence 33445555555666666663 33322 223466778888888998 7999999999887765421 1 3
Q ss_pred HcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCC
Q 013892 234 LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (434)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~ 313 (434)
....+.+.|+++++ +..+|.+++++.++.. ++++|++.--..|- .-+++++.++|.+.|.++++|-+|.
T Consensus 139 ~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~-----kPklIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~ 207 (399)
T PF00464_consen 139 GLYFESVPYPVDPD-TGLIDYDELEKLAKEH-----KPKLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHI 207 (399)
T ss_dssp HHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH-------SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTT
T ss_pred cceEEEEeeeeecC-CCeECHHHHHHHHhhc-----CCCEEEECchhccC-----ccCHHHHHHHHHhcCcEEEeccccc
Confidence 34568899999865 4689999999999987 89999887443332 2348899999999999999999986
Q ss_pred CCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC--------------HHHHHHHHHH
Q 013892 314 ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS--------------AEVREQIYKV 379 (434)
Q Consensus 314 ~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~--------------~~~~~~l~~~ 379 (434)
.....+.. +.+.. + +-| |+..|..|+| +|=|.|.+.+ + +++.+.|.+.
T Consensus 208 ~GLIa~g~-~~~P~---~-----~AD---vvt~sThKtl---~GPrggiI~~---~~~~~~~~~~~~~~~~~l~~~I~~a 269 (399)
T PF00464_consen 208 AGLIAGGL-FPNPF---P-----YAD---VVTGSTHKTL---RGPRGGIILT---NKGSKNVDKKGKEIDEELAEKIDSA 269 (399)
T ss_dssp HHHHHTTS-S--GC---C-----TSS---EEEEESSGGG----SSS-EEEEE---S-SEEEE-TTS-EEEHHHHHHHHHH
T ss_pred ccceehhe-ecCcc---c-----cce---EEEeeccccc---cccCceEEEE---cCCccccCCcccccHHHHHHHhccc
Confidence 54333221 22211 1 134 8899999998 6999999987 5 8899998876
Q ss_pred hhccc--CCc--hHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013892 380 ASVNL--CSN--ISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKANI 430 (434)
Q Consensus 380 ~~~~~--~~~--~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 430 (434)
..... ++. .++..++...-......++..++..++.+.|.+.|.+++..++
T Consensus 270 vfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~ 324 (399)
T PF00464_consen 270 VFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGFKVV 324 (399)
T ss_dssp HTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEG
T ss_pred cCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEE
Confidence 54222 222 2222211111101112356667778888888888888765443
No 350
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.11 E-value=9e-09 Score=104.81 Aligned_cols=245 Identities=11% Similarity=0.049 Sum_probs=141.1
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC-CE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g-d~ 217 (434)
.-+|.+++++.+.++... ... .+.....++.+.+++.+ . ..+.+++++++++|+..+++....-.| .+
T Consensus 64 h~~p~v~~Ai~~q~~~~~---~~~-~~~~~~~~la~~l~~~~----p---~~~~v~f~~sGseA~e~AlklAr~~tgr~~ 132 (431)
T PRK06209 64 HAYPPVVEAVREALQDGC---NFT-RPSAIELDAAESFLELI----D---GADMVKFCKNGSDATSAAVRLARAYTGRDL 132 (431)
T ss_pred CCCHHHHHHHHHHHHhCc---CCC-CCCHHHHHHHHHHHHhC----C---ccceEEEecCHHHHHHHHHHHHHHHhCCCe
Confidence 446789999999988642 111 12221123444444432 1 136899999999999999987542233 45
Q ss_pred EEEc-CCCChhHHHHHHHcCCeE-----------EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 218 ILCP-IPQYPLYSASIALHGGTL-----------VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 218 Vlv~-~p~y~~~~~~~~~~g~~~-----------~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
|+.. .-.|..+.... .|... ..+.+. .-|++.|++.++.. +.++.+|+ ..|- .|.
T Consensus 133 i~~~~~~~~h~~~~~~--~g~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~---~~~~aavi-~Epv--~g~ 199 (431)
T PRK06209 133 VARCADHPFFSTDDWF--IGTTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDH---PGRIACVI-LEPA--TAD 199 (431)
T ss_pred EEEeccCccccccccc--cccCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhC---CCCEEEEE-Eccc--cCC
Confidence 5544 22222211100 11110 011111 12789999888642 11344444 4452 344
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
..+.+.+++|.++|++||+++|+||++.++.+.. . .....++ ..|| +.+++|.++ .|..+|++++
T Consensus 200 ~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~---~----g~~~~~g-v~PD-----i~t~gK~lg--gG~p~~av~~ 264 (431)
T PRK06209 200 EPQDGFLHEVRRLCHENGALFILDEMITGFRWHM---R----GAQKLYG-IVPD-----LSCFGKALG--NGFAVSALAG 264 (431)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc---c----hhhHHhC-CCcc-----eeeehhhhc--CCcccEEEEE
Confidence 7778899999999999999999999998753321 0 1111111 2356 257899994 4899999987
Q ss_pred ecCCHHHHHH--HHHH-------hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQ--IYKV-------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 366 ~~~~~~~~~~--l~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++++++. +... .+.+..++++..+++...|+--+. +..+++..++-+.+.+.|++..
T Consensus 265 ---~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~~~ 330 (431)
T PRK06209 265 ---KREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD-EDVIERLHEQGAKLAAGVNEAA 330 (431)
T ss_pred ---HHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHH
Confidence 8888876 3111 123445566666666555543211 1356667777777777777654
No 351
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.08 E-value=1.3e-09 Score=105.89 Aligned_cols=235 Identities=16% Similarity=0.162 Sum_probs=157.6
Q ss_pred cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCC
Q 013892 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDE 246 (434)
Q Consensus 167 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~ 246 (434)
.|..++.+.+.+..++..| .++.+++..|- ......+-.|+ .+|.-|+-..-.|......++..|+.++.+..+
T Consensus 178 ~G~~~~hkelE~l~A~f~g---~e~a~vF~mGf-~TNs~~~p~l~-~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN- 251 (519)
T KOG1357|consen 178 AGTTEEHKELEELVARFLG---VEDAIVFSMGF-ATNSMNIPSLL-GKGSLIISDELNHASLITGARLSGATTRVFRHN- 251 (519)
T ss_pred cccHHHHHHHHHHHHHhcC---CcceEEEeccc-cccccCcceee-cCCcceeeccccchheeccccccCceEEEEecC-
Confidence 3555555555555555555 56778888884 44455556666 799999999999999999999999999988755
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCC-C----ee-EEEEe-cCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 013892 247 ATGWGLETSEVKKQLEAAKAKGI-T----VR-ALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (434)
Q Consensus 247 ~~~~~~d~~~l~~~l~~~~~~g~-~----~~-~i~l~-~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~ 319 (434)
|..+||+.|+++-.+|. + -+ .+++. .-..--|.+.. +.+++++++++..+++.||++.....+.
T Consensus 252 ------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~g~ 322 (519)
T KOG1357|consen 252 ------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAMGA 322 (519)
T ss_pred ------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccccEEEEeeccccccccCC
Confidence 78889999988755541 1 12 23333 33444555554 8999999999999999999999877654
Q ss_pred CCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh----cccCCchHHHHHHH
Q 013892 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS----VNLCSNISGQILAS 395 (434)
Q Consensus 320 ~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~q~~~~ 395 (434)
.+. .+....+....+ --|..++|+|+| | .-+||+.. ++++++.+...-. ..+.++++.|....
T Consensus 323 tGr-----gvce~~g~d~~d-vDImMGtftKSf-g---a~GGyiag---sk~lid~lrt~s~~~~yat~~sppvaqq~~s 389 (519)
T KOG1357|consen 323 TGR-----GVCEYFGVDPED-VDIMMGTFTKSF-G---AAGGYIAG---SKELIDYLRTPSPSALYATSLSPPVAQQILT 389 (519)
T ss_pred CCc-----ceeeccCCCchh-heeecceehhhc-c---cccceecC---cHHHHhhhccCCCceeecccCChHHHHHHHH
Confidence 321 111111111123 248899999998 4 33589866 8999988865421 23345555565543
Q ss_pred HHc---CCC--CCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 013892 396 LVM---SPP--KVGDESYESYCAERDGILSSLARRAKAN 429 (434)
Q Consensus 396 ~~l---~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~ 429 (434)
.+. ..+ +.+++..++..+++..++..|++.+.++
T Consensus 390 sl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfiv 428 (519)
T KOG1357|consen 390 SVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIV 428 (519)
T ss_pred HHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEE
Confidence 322 211 3367788889999999988888765443
No 352
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.00 E-value=1.4e-08 Score=103.20 Aligned_cols=173 Identities=19% Similarity=0.183 Sum_probs=126.2
Q ss_pred CCcch-HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEe
Q 013892 165 HSQGI-KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYY 243 (434)
Q Consensus 165 ~~~G~-~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~ 243 (434)
...|. .+..+.+|+.+ | .....++++|.+.++..+..+++ .+||.|+++..+|-+....+-..|+.++++.
T Consensus 67 ~p~G~i~eAqe~aA~~f----g---Ad~tyFvvNGTS~ank~vi~a~~-~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~ 138 (557)
T COG1982 67 DPEGPIKEAQELAARVF----G---ADHTYFVVNGTSTANKAVINAVL-TPGDKVLVDRNCHKSIHHGLILAGATPVYLE 138 (557)
T ss_pred CCCccHHHHHHHHHHHh----C---CCceEEEECCccHHHHHHHHhhc-CCCCEEEecCCccHHHHHHHHHcCCceEEec
Confidence 34444 34444455544 3 22368899999999999999999 7999999999999999999999999999887
Q ss_pred cCCCCCC----CCCHHHHHHHHHHHHhcCCCe-eEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccC
Q 013892 244 LDEATGW----GLETSEVKKQLEAAKAKGITV-RALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (434)
Q Consensus 244 ~~~~~~~----~~d~~~l~~~l~~~~~~g~~~-~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 318 (434)
...+..| +++.+.+++++.++. .. |+++++||.. -|+++. +++|++++.+.++|+++|+++.-. ++
T Consensus 139 p~~np~~gi~ggI~~~~~~~~l~~~~----~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~-~~ 209 (557)
T COG1982 139 PSRNPLYGIIGGIPLETFKEALLAHP----DAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAH-FD 209 (557)
T ss_pred CCCCccccccCCCCHHHHHHHHHhCh----hhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCccc-cc
Confidence 6544323 468999999887642 34 8899999987 899999 889999999999999999988762 22
Q ss_pred CCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 319 ~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
....... ... ....+++++|..|.++ ++.-+-++.+
T Consensus 210 ~~~~l~~---~~~------~~~~~~~tqS~HK~l~---alSQaS~iHv 245 (557)
T COG1982 210 FSPMLPE---SAL------NGGADFVTQSTHKLLA---ALSQASMIHV 245 (557)
T ss_pred ccccCcc---hhh------hcCceEEEechhhhhh---hhhhhHHHhh
Confidence 1111111 111 1224689999999873 6666555443
No 353
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.99 E-value=1.3e-07 Score=102.31 Aligned_cols=248 Identities=15% Similarity=0.123 Sum_probs=147.7
Q ss_pred Cccccccc----CCC--CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 129 SILDRSET----QGL--FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 129 ~~l~~~~~----~~~--~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
..+|+.++ ..+ -.+++.+++.+++.+..- .. .+.. ..+-...+|+.+.+.-+ .-..+.+++++++++|
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~h--v~--~~~~-~hepa~~LAe~L~~~~~-~~~l~rVffs~sGSeA 439 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGH--VM--FPEN-VHEPALRAAELLLGGPG-KGWASRVFFSDNGSTA 439 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCc--cc--cCcc-CCHHHHHHHHHHHhccC-CCCCCEEEECCchHHH
Confidence 46777665 222 489999999999887431 11 1111 22344555555544211 0113589999999999
Q ss_pred HHHHHHHHhc------C--------------CCCEEEEcCCCChhHHHHHHHcCCe---------E------EEE--ecC
Q 013892 203 VHMMMQLLIR------S--------------ENDGILCPIPQYPLYSASIALHGGT---------L------VPY--YLD 245 (434)
Q Consensus 203 l~~~l~~l~~------~--------------~gd~Vlv~~p~y~~~~~~~~~~g~~---------~------~~~--~~~ 245 (434)
+..+++...+ + ...+|+....+|.+-...+...+.. . ..+ |..
T Consensus 440 vE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~ 519 (817)
T PLN02974 440 IEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTV 519 (817)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcc
Confidence 9998886531 1 1346888888887643332222210 0 000 000
Q ss_pred ---C---------C---------CCCC-----CC------------HHHHHHHHHHHH--hcCCCeeEEEEec-CCCCCc
Q 013892 246 ---E---------A---------TGWG-----LE------------TSEVKKQLEAAK--AKGITVRALVVIN-PGNPTG 284 (434)
Q Consensus 246 ---~---------~---------~~~~-----~d------------~~~l~~~l~~~~--~~g~~~~~i~l~~-p~NPtG 284 (434)
. . ..|. +| .+.+++.|+... .++.++.+|++.- .+.-.|
T Consensus 520 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGG 599 (817)
T PLN02974 520 GMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGG 599 (817)
T ss_pred ccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCC
Confidence 0 0 0010 00 244556554321 1223455555553 256668
Q ss_pred cCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEE
Q 013892 285 QVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGY 362 (434)
Q Consensus 285 ~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~ 362 (434)
+++ +++.+++|.++|++||+++|+||++.+|...+. +... ..+ ...|| ++ +++|.++ .| +.+|.
T Consensus 600 mi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~--~fa~----e~~-gv~PD--Ii---~~gKgLt--gG~~Plaa 665 (817)
T PLN02974 600 MLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGV--ESAW----ELL-GCKPD--IA---CYAKLLT--GGLVPLAA 665 (817)
T ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccc--hhhH----Hhc-CCCCC--EE---eeccccc--CCCCccEE
Confidence 765 677899999999999999999999999655443 2221 111 23477 22 6789996 48 69999
Q ss_pred EEEecCCHHHHHHHHH-------HhhcccCCchHHHHHHHHHcC
Q 013892 363 MEVTGFSAEVREQIYK-------VASVNLCSNISGQILASLVMS 399 (434)
Q Consensus 363 ~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~q~~~~~~l~ 399 (434)
+++ .+++.+.+.. .+..+++.++++.+++...|+
T Consensus 666 ~l~---~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~ 706 (817)
T PLN02974 666 TLA---TEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQ 706 (817)
T ss_pred EEE---cHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHH
Confidence 988 8999988852 134556788888888766664
No 354
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.98 E-value=1.9e-08 Score=108.91 Aligned_cols=181 Identities=17% Similarity=0.207 Sum_probs=124.1
Q ss_pred CCCCCCC---cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh---c----CCCCEEEEcCCCChhHH
Q 013892 160 TGAYSHS---QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI---R----SENDGILCPIPQYPLYS 229 (434)
Q Consensus 160 ~~~Y~~~---~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~---~----~~gd~Vlv~~p~y~~~~ 229 (434)
.+-|.|. +|..++...+.+|+.+..|++ . --+..+|++.+-...+.++. . ...+.|+++.-.|....
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd--~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP 592 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD--A-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP 592 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC--C-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence 4555553 688888888999998888865 2 22333444443332222222 1 12368999999997777
Q ss_pred HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 013892 230 ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (434)
Q Consensus 230 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 309 (434)
..++..|.+++.++++++ ..+|+++|+++++++ +.++++|++++|+| +|.+-+ ++++|+++|+++|.++++|
T Consensus 593 asa~~~G~~Vv~V~~d~~--G~iDle~L~~~i~~~---~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VD 664 (939)
T TIGR00461 593 ASAAMAGMQVVPVNCDQD--GNIDLVDLKNKAEQH---GDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLD 664 (939)
T ss_pred HHHHHCCCEEEEeccCCC--CCcCHHHHHHHHhhc---CCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEE
Confidence 778889999999998744 489999999999752 23799999999999 788753 4899999999999999999
Q ss_pred cCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCC---CceeEEEEE
Q 013892 310 EVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC---GKRGGYMEV 365 (434)
Q Consensus 310 eay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~---G~R~G~~~~ 365 (434)
.++..-...-..+ ..++ -| +++.|..|+|++-. |--+|++.+
T Consensus 665 gAq~~al~~l~~P--------g~~G---aD---i~~~s~HKtf~~P~G~GGPg~G~i~v 709 (939)
T TIGR00461 665 GANMNAQVGLTSP--------GDLG---AD---VCHLNLHKTFCIPHGGGGPGMGPIGV 709 (939)
T ss_pred ecChhhCCCCCCc--------cccC---CC---EEEecCCccCCCCCCCCCCCeEEEEE
Confidence 9985411111100 1122 34 77889999886211 334688866
No 355
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.97 E-value=5.7e-08 Score=106.75 Aligned_cols=207 Identities=15% Similarity=0.133 Sum_probs=134.2
Q ss_pred cccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCC---CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcC-ChHHHHHH
Q 013892 130 ILDRSETQGLFSADSIERAWQILDQIPGRATGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTD-GASPAVHM 205 (434)
Q Consensus 130 ~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~-G~~~al~~ 205 (434)
++.+++....+++.+...+.. .......+-|.| .+|..++...+.+++.+..|.+ ++.+.. |++++...
T Consensus 501 ~i~lGsct~~~~p~~~~~~~~---~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d----~~sl~~~~ga~ge~a 573 (954)
T PRK05367 501 MIPLGSCTMKLNAAAEMIPIT---WPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD----AVSLQPNAGAQGEYA 573 (954)
T ss_pred eeeCCcCCCcCCHHHHHHHHh---CccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC----CEEECccHHHHHHHH
Confidence 444555555556655544321 111112444555 3678888888899998888843 565555 44444423
Q ss_pred ---HHHHHhcCCCC----EEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEec
Q 013892 206 ---MMQLLIRSEND----GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN 278 (434)
Q Consensus 206 ---~l~~l~~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~ 278 (434)
+++.+...+|+ +|++++..|......+...|.+++.++++.+ ..+|+++|++++++. +.++.+|++++
T Consensus 574 gL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~--G~iD~~~L~~~i~~~---~~~la~V~it~ 648 (954)
T PRK05367 574 GLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDEN--GNIDLDDLRAKAEEH---ADNLAAIMITY 648 (954)
T ss_pred HHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCC--CCcCHHHHHHHHhcc---CCCeEEEEEEc
Confidence 33332223554 6999999998888888999999999998754 389999999998752 11577888889
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCC--
Q 013892 279 PGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC-- 356 (434)
Q Consensus 279 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~-- 356 (434)
|++-.+...+ +++|+++|+++|+++++|.++......-. .. ..++ -| +++.|..|.|++-.
T Consensus 649 pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~al~~l~----~p----g~~G---AD---i~~~s~HK~f~~P~G~ 711 (954)
T PRK05367 649 PSTHGVFEET---IREICEIVHEHGGQVYLDGANMNAQVGLA----RP----GDIG---AD---VSHLNLHKTFCIPHGG 711 (954)
T ss_pred CCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhhccCCC----Ch----hhcC---CC---EEEecCcccCCCCcCC
Confidence 8875333445 99999999999999999999964222111 10 1222 34 67788999873111
Q ss_pred -CceeEEEEE
Q 013892 357 -GKRGGYMEV 365 (434)
Q Consensus 357 -G~R~G~~~~ 365 (434)
|--+|++.+
T Consensus 712 GGPg~G~l~v 721 (954)
T PRK05367 712 GGPGVGPIGV 721 (954)
T ss_pred CCCceEEEee
Confidence 233677765
No 356
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.97 E-value=3.3e-08 Score=94.85 Aligned_cols=273 Identities=19% Similarity=0.191 Sum_probs=163.0
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+-.+ -..-.|++++++.+.+....- ....|.... ..++.+++++.+ +-+-+.+++++++++
T Consensus 49 G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H-~t~~~~~~p-i~~~Ae~L~s~~------P~~l~~vfF~nsGsE 120 (442)
T KOG1404|consen 49 GRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYH-TTSGYLNPP-IHDLAEALVSKL------PGDLKVVFFVNSGSE 120 (442)
T ss_pred CceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEE-eeccccCCc-HHHHHHHHHHhC------CCCceEEEEecCCch
Confidence 4446666555 345688899998887765321 245666555 667777777776 345567999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChh-HHHHHHHcCCeEEEEecCCC--------------CCCCCC-----HHHHHHH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPL-YSASIALHGGTLVPYYLDEA--------------TGWGLE-----TSEVKKQ 260 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~-~~~~~~~~g~~~~~~~~~~~--------------~~~~~d-----~~~l~~~ 260 (434)
|..+++..... ...-.|+--.-+|.+ ....+..-|......+.... .-|+-+ .+.+.+.
T Consensus 121 ANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~ 200 (442)
T KOG1404|consen 121 ANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKE 200 (442)
T ss_pred HHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHH
Confidence 99998877542 122345555555554 33333333433332221111 011111 2333333
Q ss_pred HHHH-HhcCCCeeEEEEe-cCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCC
Q 013892 261 LEAA-KAKGITVRALVVI-NPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (434)
Q Consensus 261 l~~~-~~~g~~~~~i~l~-~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~ 337 (434)
+++. ...++..-+-++. ..+--.|++ +++-.+++..++|+++|.+.|.||+..+|...+. ++.+.+. + ..
T Consensus 201 l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~--~wgfe~h--~---v~ 273 (442)
T KOG1404|consen 201 LEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGH--MWGFESH--G---VV 273 (442)
T ss_pred HHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccc--ccccccc--C---CC
Confidence 3221 1122233344444 556656765 4556899999999999999999999999555443 5554321 1 22
Q ss_pred CCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh--cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHH
Q 013892 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (434)
Q Consensus 338 ~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r 415 (434)
|| +-|++|++ | .|..+|.++. .+++.+.+.+..+ .+...+++..+++.+.|+--+. +.+.|.-.+--
T Consensus 274 PD-----IvTmAKgi-G-nG~Pl~AVvt---t~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vike-e~LqE~aa~vG 342 (442)
T KOG1404|consen 274 PD-----IVTMAKGI-G-NGFPLGAVVT---TPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKE-ENLQENAAEVG 342 (442)
T ss_pred cc-----HHHHHhhc-c-CCCcceeeec---CHHHHHHHHhccccccccCCCchhHHHHHHHHHHHHH-HhHHHHHHHHH
Confidence 55 34999999 5 6999999988 9999999877653 5567788888777777753110 12233333334
Q ss_pred HHHHHHHHHH
Q 013892 416 DGILSSLARR 425 (434)
Q Consensus 416 ~~l~~~L~~~ 425 (434)
.++.+.|.+.
T Consensus 343 ~yl~~~l~~l 352 (442)
T KOG1404|consen 343 SYLLEKLAAL 352 (442)
T ss_pred HHHHHHHHHH
Confidence 4444554444
No 357
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.95 E-value=1.6e-07 Score=93.40 Aligned_cols=200 Identities=18% Similarity=0.161 Sum_probs=128.5
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC-------C-ChhHHHH
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIP-------Q-YPLYSAS 231 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p-------~-y~~~~~~ 231 (434)
.-.|.....+..|.+.+++.+ | .+.++.|..+..+-.++++.++..+|++|.+..+ . |......
T Consensus 67 DD~Y~gdpSv~~Lee~vael~----G----~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~ 138 (467)
T TIGR02617 67 DEAYSGSRSYYALAESVKNIF----G----YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGH 138 (467)
T ss_pred CcccccCchHHHHHHHHHHHh----C----CceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchHH
Confidence 345877777899999999987 3 4467888777888888888888437887775443 2 2223346
Q ss_pred HHHcCCeEEEEecCC------CC--CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCC-CCccCCCHHHHHHHHHHHHHc
Q 013892 232 IALHGGTLVPYYLDE------AT--GWGLETSEVKKQLEAAKAKGITVRALVVINPGN-PTGQVLAEENQRAIVDFCKKE 302 (434)
Q Consensus 232 ~~~~g~~~~~~~~~~------~~--~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~N-PtG~~~~~~~l~~i~~~~~~~ 302 (434)
+...|+.++.++.++ +. .-.+|++.|+++|++...+ +.-.+...--+| --|+++|.+.++++.++|++|
T Consensus 139 a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~--~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~ 216 (467)
T TIGR02617 139 SQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN--NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKY 216 (467)
T ss_pred HHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC--CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHc
Confidence 777898888764321 11 2268999999999864211 222222221123 258899999999999999999
Q ss_pred CCEEEEccCCCCC-cc---C--CCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH---HHH
Q 013892 303 GLVLLADEVYQEN-VY---V--PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA---EVR 373 (434)
Q Consensus 303 ~~~li~Deay~~~-~~---~--~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~---~~~ 373 (434)
|+.++.|.+--.. .+ . ..-.-.+++.+.+++.. +-| .+.-|+||.+ |..+|-+++.. ++ ++.
T Consensus 217 GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~-~aD---svt~slsKgl----gApvGg~Lag~-d~~~~~l~ 287 (467)
T TIGR02617 217 DIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYK-YAD---MLAMSAKKDA----MVPMGGLLCFK-DDSFFDVY 287 (467)
T ss_pred CCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhc-cCC---EEEEEcCCCC----CCcccceEEec-chhHHHHH
Confidence 9999999854321 11 0 00013455666655542 234 4456999986 67777766533 66 444
Q ss_pred HHHHH
Q 013892 374 EQIYK 378 (434)
Q Consensus 374 ~~l~~ 378 (434)
++++.
T Consensus 288 ~~~~~ 292 (467)
T TIGR02617 288 TECRT 292 (467)
T ss_pred HHHHh
Confidence 44443
No 358
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.95 E-value=5.5e-08 Score=96.97 Aligned_cols=258 Identities=16% Similarity=0.185 Sum_probs=149.8
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc------CC
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SE 214 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~------~~ 214 (434)
.+++.+++.+++++..-.......... ..+|-+.+++.. . +-+-++|++++|+++++..+++.... .|
T Consensus 62 ~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~a----P-~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p 135 (449)
T COG0161 62 RPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELA----P-EGGLDHVFFTDSGSEAVETALKMALQYWRARGQP 135 (449)
T ss_pred CHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhC----C-CCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCC
Confidence 566888898888876421111122212 445555555554 1 12357899999999999999988641 23
Q ss_pred C-CEEEEcCCCChhHHHHHHHcCC-e-------------EEEEecCC------CCCCC----CCHHHHHHHHHHHHhcCC
Q 013892 215 N-DGILCPIPQYPLYSASIALHGG-T-------------LVPYYLDE------ATGWG----LETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 215 g-d~Vlv~~p~y~~~~~~~~~~g~-~-------------~~~~~~~~------~~~~~----~d~~~l~~~l~~~~~~g~ 269 (434)
+ .+++.-...|.+-.-..-..|. . +..++... +..+. -..++|++.|..+ |+
T Consensus 136 ~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~---g~ 212 (449)
T COG0161 136 QRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEH---GP 212 (449)
T ss_pred cceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhc---Cc
Confidence 3 3488778888753332222221 1 11111111 01111 1245666666553 43
Q ss_pred CeeEEEEecC--CCCCccCCCH-HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 270 TVRALVVINP--GNPTGQVLAE-ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 270 ~~~~i~l~~p--~NPtG~~~~~-~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
..-+-++.-| +--+|+.++. .-|+++.++|++||+++|.||+-.+|...+. .... ...+ ..|| ++
T Consensus 213 ~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~--~FA~----e~~g-i~PD--i~--- 280 (449)
T COG0161 213 ETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGK--MFAC----EHAG-IVPD--IL--- 280 (449)
T ss_pred ccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCch--hhhh----hhcC-CCCC--ee---
Confidence 3445555556 4447776554 5799999999999999999999999544443 1111 1111 3477 22
Q ss_pred cCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH------hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHH
Q 013892 347 SVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILS 420 (434)
Q Consensus 347 S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 420 (434)
+++|+++| -=+.+|.+++ .+++.+.+..- +..++..++++.+++.+.|+--+. +.+.++.++.-..+.+
T Consensus 281 ~~aKGLT~-GY~Pl~a~l~---~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~-e~l~~~~~~~~~~l~~ 355 (449)
T COG0161 281 CLAKGLTG-GYLPLSAVLT---SDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEE-EDLLERVAEIGAYLQA 355 (449)
T ss_pred eecccccc-cchhhHhHhh---hHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHH
Confidence 67898853 2266776666 78888888663 234557788888877666642110 2345555555556666
Q ss_pred HHHH
Q 013892 421 SLAR 424 (434)
Q Consensus 421 ~L~~ 424 (434)
.|++
T Consensus 356 ~L~~ 359 (449)
T COG0161 356 GLQA 359 (449)
T ss_pred HHHH
Confidence 6655
No 359
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.95 E-value=6.6e-07 Score=93.78 Aligned_cols=169 Identities=15% Similarity=0.161 Sum_probs=122.5
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-C--C--
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-S--E-- 214 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-~--~-- 214 (434)
.++.++..+...+-+. ....|..+.+...+.+.+.+++.+..|.+- ..=.+|+|+|.+....+..... . |
T Consensus 95 ~~paila~~~a~~~N~---n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a 169 (608)
T TIGR03811 95 LMPAILAYNYAMLWNG---NNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFA 169 (608)
T ss_pred CHHHHHHHHHHHHhCC---CCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccch
Confidence 3444554443333332 144555566788999999999999998753 3445788888887765554321 0 0
Q ss_pred ----------------------------------------------C------CEEEEcCCCChhHHHHHHHcCC---eE
Q 013892 215 ----------------------------------------------N------DGILCPIPQYPLYSASIALHGG---TL 239 (434)
Q Consensus 215 ----------------------------------------------g------d~Vlv~~p~y~~~~~~~~~~g~---~~ 239 (434)
| .+|+++.-.|.++..++...|+ .+
T Consensus 170 ~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~v 249 (608)
T TIGR03811 170 MKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQV 249 (608)
T ss_pred hhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccE
Confidence 0 0588888889999999999998 58
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCC--EEEEccCCCCC
Q 013892 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL--VLLADEVYQEN 315 (434)
Q Consensus 240 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~--~li~Deay~~~ 315 (434)
+.+|+++ ++.+|++.|++.|++..++|..+-+|+.+-....+|.+=+.+++.+|++.++++|+ ++.+|.||+++
T Consensus 250 v~VpvD~--~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~ 325 (608)
T TIGR03811 250 IPVPVDS--NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGY 325 (608)
T ss_pred EEeecCC--CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccch
Confidence 8999875 46999999999999877777667677777888889999774444444444478898 69999999995
No 360
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.92 E-value=2.9e-07 Score=89.04 Aligned_cols=269 Identities=14% Similarity=0.123 Sum_probs=161.5
Q ss_pred Cccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
+.+|+..+ ...-.|++.+++.+......- ..+.|-... .-++.+.+.+.+ +- -.++.|++.+.+++|+
T Consensus 57 EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~h-s~~~~~t~e-av~l~~~l~~~~----~~-~~~~rvff~nsGTeAn 129 (433)
T KOG1401|consen 57 EYIDFTSSWAVTILGHANPEVARALAEQAKKLGH-SSNGYFTLE-AVELEEVLSAVL----GK-GSAERVFFCNSGTEAN 129 (433)
T ss_pred eeeeeccceeccccCCCCHHHHHHHHHHHhhhee-ccCccccHH-HHHHHHHHHhcc----cC-CCccEEEEecCCcHHH
Confidence 34555544 334578888888877776432 133333222 333444444333 21 2678999999999999
Q ss_pred HHHHHHHhc-----CCCC--EEEEcCCCChhHH-HHHHHcCCeEEEEecCC---CCC--CCCCHHHHHHHHHHHHhcCCC
Q 013892 204 HMMMQLLIR-----SEND--GILCPIPQYPLYS-ASIALHGGTLVPYYLDE---ATG--WGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 204 ~~~l~~l~~-----~~gd--~Vlv~~p~y~~~~-~~~~~~g~~~~~~~~~~---~~~--~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..++....+ .+-+ +|+...-+|.+-. ..+...+......|.++ +-. ---|...+++.++.++. .
T Consensus 130 e~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~---~ 206 (433)
T KOG1401|consen 130 ETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG---E 206 (433)
T ss_pred HHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC---c
Confidence 999887642 1112 4777777776533 33333333222222211 000 01268999999987521 3
Q ss_pred eeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCC
Q 013892 271 VRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS 349 (434)
Q Consensus 271 ~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~S 349 (434)
+.+|++.--+--.|.. .+++.+..|...|+++|+++|.||+..+|...+.. .+.++-...|| +.++.
T Consensus 207 IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~-------~a~e~~~~~PD-----I~t~a 274 (433)
T KOG1401|consen 207 IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYG-------WAQEYFGVTPD-----ITTVA 274 (433)
T ss_pred eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchH-------HHHHHhCcCCc-----ceeeh
Confidence 5666665445546654 45678999999999999999999999996555431 11122113477 34789
Q ss_pred CCCCCCCCceeEEEEEecCCHHHHHHHHHH----hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 350 KGYYGECGKRGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 350 K~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
|.+. -|+.+|..++ ++++.+.+.-- +..+++.++++..++...|+.-.. .+.++...+.-+.+++.|.+.
T Consensus 275 K~L~--gGlPigA~~v---~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~-~e~~k~vs~~~k~L~~~l~e~ 348 (433)
T KOG1401|consen 275 KPLG--GGLPIGATGV---RDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKD-PETLKNVSKIGKELRKLLDEY 348 (433)
T ss_pred hhcc--CCceeEEEee---hHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHH
Confidence 9995 4999999987 88888888532 234557788887777766643111 244444455555555555444
No 361
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=98.86 E-value=1.7e-07 Score=93.26 Aligned_cols=244 Identities=14% Similarity=0.097 Sum_probs=139.1
Q ss_pred ccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCC--CcchHHHHHHHHHHHHhhcCCCCCCCCEEEc-CChHHHHHHHHHH
Q 013892 133 RSETQGLFSADSIERAWQILDQIPGRATGAYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLT-DGASPAVHMMMQL 209 (434)
Q Consensus 133 ~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t-~G~~~al~~~l~~ 209 (434)
|..||...|+++++++.+...... ....+.+ ..-+.+.|+.+++++ +.+ +..+|+++ .++|.++..++..
T Consensus 7 f~pGP~~~~~~v~~a~~~~~~~~~--~~~hr~~~f~~~~~~~r~~l~~l~----~~~-~~~~v~f~~gs~T~a~~~~~~~ 79 (361)
T TIGR01366 7 FGSGPSKVRLEQLQALTTTAASLF--GTSHRQAPVKNLVGRVREGLAELF----SLP-DGYEVILGNGGATAFWDAATFG 79 (361)
T ss_pred ccCCCcCCCHHHHHHHHhcCcccc--ccCcCChHHHHHHHHHHHHHHHHh----CCC-CCceEEEECCchhHHHHHHHHh
Confidence 445566788999888653211110 0112222 223456677777776 321 23478886 5599999999998
Q ss_pred HhcCCCCEEEEcCCCChh-HHHHHHHc--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC
Q 013892 210 LIRSENDGILCPIPQYPL-YSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (434)
Q Consensus 210 l~~~~gd~Vlv~~p~y~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~ 286 (434)
++ .+ +.+.+..-.|.. +...+... +.++..++.+... .++. .+.+ ++++|.+++-.|.||.+
T Consensus 80 l~-~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~-----~~~~------~~~lV~~~h~et~tG~~ 144 (361)
T TIGR01366 80 LI-EK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGS--APEP-----QADP------GVDVIAWAHNETSTGVA 144 (361)
T ss_pred cc-cc-cccEEecCHHHHHHHHHHHhhhccCCceEEecCCCC--CCCC-----ccCC------CCCEEEEcccCCcccee
Confidence 86 33 344444555542 33344431 3366666654321 2332 1222 79999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 287 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
.+ +++| ++++|+++|+|.+-.- +.. ...+.. -| +++.|-.|.+ |.+|- ++.+++
T Consensus 145 ~p---i~~I---~~~~g~~~iVDavqs~---g~~--~idv~~---------~D---~~~~s~~K~l-g~~~G-l~~~~~- 198 (361)
T TIGR01366 145 VP---VRRP---EGSDDALVVIDATSGA---GGL--PVDIAE---------TD---VYYFAPQKNF-ASDGG-LWLAIM- 198 (361)
T ss_pred cc---cccc---cccCCCeEEEEcCccc---cCC--CCCHHH---------CC---EEEEEchhhc-CCCCc-eEEEEE-
Confidence 99 4555 4789999999998764 222 222221 13 6788999998 54531 333344
Q ss_pred cCCHHHHHHHHHHh----------------------hcccCCchHHHHHHHHHcCC---CCCChHHHHHHHHHHHHHHHH
Q 013892 367 GFSAEVREQIYKVA----------------------SVNLCSNISGQILASLVMSP---PKVGDESYESYCAERDGILSS 421 (434)
Q Consensus 367 ~~~~~~~~~l~~~~----------------------~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~ 421 (434)
++++++++.... .....++...-.++..+++. ...++...+++++..+.+++.
T Consensus 199 --s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~ 276 (361)
T TIGR01366 199 --SPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSW 276 (361)
T ss_pred --CHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence 677766654210 01223333322233333332 112455567777778888888
Q ss_pred HHHHH
Q 013892 422 LARRA 426 (434)
Q Consensus 422 L~~~~ 426 (434)
|++..
T Consensus 277 l~~~~ 281 (361)
T TIGR01366 277 AQERP 281 (361)
T ss_pred HHhCC
Confidence 87765
No 362
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.84 E-value=5.6e-07 Score=91.93 Aligned_cols=269 Identities=13% Similarity=0.091 Sum_probs=144.7
Q ss_pred CCccccccc-----CCCCCHHHHH--HHHHHHHcCCC--CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCC
Q 013892 128 PSILDRSET-----QGLFSADSIE--RAWQILDQIPG--RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDG 198 (434)
Q Consensus 128 p~~l~~~~~-----~~~~p~~v~~--~~~~~l~~~~~--~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G 198 (434)
...||+..+ -..-+|.+++ ++.+.+..... .....|. . +....+++.+.+..+ +-..+.++++++
T Consensus 45 ~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~-~----~~~~~la~~l~~~~~-p~~~~~v~f~~S 118 (443)
T PRK08297 45 RRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVY-T----VEMARFVDTFARVLG-DPELPHLFFVDG 118 (443)
T ss_pred CEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcC-C----HHHHHHHHHHHhhcC-CCCCCEEEEeCc
Confidence 345666544 2345777888 88887765320 0011121 1 222334444433221 123468999999
Q ss_pred hHHHHHHHHHHHhc---------C---C-CCEEEEcCCCChhHHHHHHHc-CCeEE---EEecC-------CCCCC----
Q 013892 199 ASPAVHMMMQLLIR---------S---E-NDGILCPIPQYPLYSASIALH-GGTLV---PYYLD-------EATGW---- 250 (434)
Q Consensus 199 ~~~al~~~l~~l~~---------~---~-gd~Vlv~~p~y~~~~~~~~~~-g~~~~---~~~~~-------~~~~~---- 250 (434)
+++|+..+++.... . + ..+|+...-+|.+........ |.... .++.. ....+
T Consensus 119 GsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (443)
T PRK08297 119 GALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPG 198 (443)
T ss_pred hHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcc
Confidence 99999999987631 1 1 267999998888765543332 21110 00100 00000
Q ss_pred -C---C------CHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 013892 251 -G---L------ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (434)
Q Consensus 251 -~---~------d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~ 319 (434)
. . +++.+++.+... +.++.+|++.-.+.-.|. ..+.+.+++|.++|++||+++|+||++.++...+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~i~~~---~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG 275 (443)
T PRK08297 199 EDLEEVEALEAEALAQARAAFERH---PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTG 275 (443)
T ss_pred cccchhhHHHHHHHHHHHHHHHhC---CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccc
Confidence 0 0 234445555431 225666665533333455 4777899999999999999999999999854433
Q ss_pred CCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH------HhhcccCCchHHHHH
Q 013892 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK------VASVNLCSNISGQIL 393 (434)
Q Consensus 320 ~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~q~~ 393 (434)
. +..+ ..++ ..|| ++ +|+|.+ + +|.+++ ..++.+.+.. ....+.+.++++..+
T Consensus 276 ~--~~a~----~~~g-v~PD--iv---~~gK~l-~-----~~a~l~---~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aa 334 (443)
T PRK08297 276 T--AWAY----QQLG-VRPD--IV---AFGKKT-Q-----VCGIMA---GRRVDEVEDNVFAVSSRINSTWGGNLVDMVR 334 (443)
T ss_pred h--HHHH----HhcC-CCCC--EE---Eecccc-c-----ccceec---chHHHHhhhhhccCccccCCCCCccHHHHHH
Confidence 2 2111 1111 2377 23 579987 3 233332 3333222211 123455677888777
Q ss_pred HHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 394 ASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 394 ~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+...|+--+. ++.+++.++.-+.+.+.|++...
T Consensus 335 a~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~ 367 (443)
T PRK08297 335 ARRILEVIEE-DGLVENAARQGEYLLARLEELAA 367 (443)
T ss_pred HHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHH
Confidence 7777652111 24556666666667777766543
No 363
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.83 E-value=3.7e-07 Score=93.24 Aligned_cols=272 Identities=14% Similarity=0.076 Sum_probs=145.2
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHH-HHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQI-LDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~-l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
....||+..+ -..-+|.+++++.+. +...-. ....|... ...++.+.+++.+.+.. +-+.+.++++++++
T Consensus 57 G~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~-~~~~~~~~-~~~~la~~l~~~l~~~~--p~~~~~v~f~~SGs 132 (464)
T TIGR00699 57 GNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLI-NRPALGNF-PSKDWAKILKEGILKVA--PKGQDQVWTGMSGS 132 (464)
T ss_pred CCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhc-ccccCCcH-HHHHHHHHHHHhHHhhC--CCCcCEEEEeCCcH
Confidence 4457777665 235578899998873 232110 01122221 12334444444222221 12336899999999
Q ss_pred HHHHHHHHHHhc-------C------------------C---CCEEEEcCCCChhHHHHHHH-cCCe-----------EE
Q 013892 201 PAVHMMMQLLIR-------S------------------E---NDGILCPIPQYPLYSASIAL-HGGT-----------LV 240 (434)
Q Consensus 201 ~al~~~l~~l~~-------~------------------~---gd~Vlv~~p~y~~~~~~~~~-~g~~-----------~~ 240 (434)
+|+..+++.... . + ..+|+...-+|.+....... .|.. ..
T Consensus 133 EAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~ 212 (464)
T TIGR00699 133 DANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWP 212 (464)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCce
Confidence 999999987631 0 1 12799999888876544332 2211 01
Q ss_pred EEecCC-CCCCC-----------CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEE
Q 013892 241 PYYLDE-ATGWG-----------LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 241 ~~~~~~-~~~~~-----------~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li 307 (434)
.+|... ...+. -+++.+++.++.. +.++.+|++.-...-.|.+. +.+.+++|.++|++||+++|
T Consensus 213 ~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI 289 (464)
T TIGR00699 213 QAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFI 289 (464)
T ss_pred ecCCCCcccccccccccchhHHHHHHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 111110 00000 1345566666532 22566666654455567766 67889999999999999999
Q ss_pred EccCCCCCccCCCCCccchHHHHhhhCC-CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH-HhhcccC
Q 013892 308 ADEVYQENVYVPEKKFHSFKKVSRSMGY-GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK-VASVNLC 385 (434)
Q Consensus 308 ~Deay~~~~~~~~~~~~s~~~~~~~l~~-~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~-~~~~~~~ 385 (434)
+||+..++...+. +..+ ..++- ..|| + -+|+|++ |-. ||++. .+ ....... ....+..
T Consensus 290 ~DEV~tGfGrtG~--~fa~----e~~gv~~~PD--i---~t~gK~l-g~g----G~~~~---~~-~~~~~~~~~~~~T~~ 349 (464)
T TIGR00699 290 VDEVQTGVGATGK--FWAH----EHWNLDDPPD--M---VTFSKKF-QTA----GYFFH---DP-AFRPNKPYRQFNTWM 349 (464)
T ss_pred EeeeeeCCCCCcc--hhHH----HhcCCCCCCC--E---EEehhhh-ccC----Ccccc---ch-hccCCCCcccccCCC
Confidence 9999988543332 2111 11110 1266 2 4679988 212 34432 22 2111011 1234556
Q ss_pred CchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 386 SNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 386 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.++++.+++.+.|+--+ -+...+...+.-+.+.+.|++..
T Consensus 350 gnp~~~aaa~a~L~~l~-~~~l~~~~~~~g~~l~~~L~~l~ 389 (464)
T TIGR00699 350 GDPSRALILREIIQEIK-RKDLLENVAHVGDYLYTGLEDLQ 389 (464)
T ss_pred CCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHH
Confidence 67777776665553211 02455555555667777776654
No 364
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=98.83 E-value=2.8e-07 Score=91.60 Aligned_cols=217 Identities=12% Similarity=-0.027 Sum_probs=142.2
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh-HH-HHHHHcCC-eEEEEecC
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL-YS-ASIALHGG-TLVPYYLD 245 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~-~~-~~~~~~g~-~~~~~~~~ 245 (434)
..++.+.+.+.+.+.++.+-+.+-++++.|++.++..++..++.++|++|++.. .|.. +. ++++.+|+ ++..+...
T Consensus 37 F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~ 115 (374)
T TIGR01365 37 GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAE 115 (374)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCC
Confidence 566666666777776674323334677999999999999999833788999865 5554 35 78888999 46776544
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccc
Q 013892 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHS 325 (434)
Q Consensus 246 ~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s 325 (434)
.. -.+++++++. + +.|++++--..||+..+ +++|+..+ ++.++|+|.+=.- +.. ...
T Consensus 116 ~g--~~~~~~~ve~----------~-~~v~~vhnETSTGv~np---v~~i~~~~--~~~lliVDavSs~---g~~--~l~ 172 (374)
T TIGR01365 116 YG--KLPDLKKVDF----------K-NDVVFTWNGTTSGVRVP---NGDFIPAD--REGLTICDATSAA---FAQ--DLD 172 (374)
T ss_pred CC--CCCCHHHcCC----------C-CCEEEecCCCchheecc---cccccccc--CCCcEEEEccchh---cCC--CCC
Confidence 32 2678888862 1 12667777788999998 44544322 4899999997663 332 111
Q ss_pred hHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH----------------------h--h
Q 013892 326 FKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV----------------------A--S 381 (434)
Q Consensus 326 ~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----------------------~--~ 381 (434)
+.. + | +++.|--|.+.+.|| ++++++ +++.++++... . +
T Consensus 173 ~d~----i-----D---v~~tgsQK~L~~ppG--ls~v~v---s~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
T TIGR01365 173 YHK----L-----D---VVTFSWQKVLGGEGA--HGMLIL---SPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGS 235 (374)
T ss_pred hhH----C-----c---EEEEechhccCCCCc--eEEEEE---CHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCC
Confidence 111 1 2 667788999966666 456655 77766655421 0 1
Q ss_pred cccCCchHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 382 VNLCSNISGQILASLVMS---PPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 382 ~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
....|+.....++..++. ...-++...+++++..+.+++.++++.
T Consensus 236 t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg 283 (374)
T TIGR01365 236 TINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNN 283 (374)
T ss_pred CCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 223445555555555553 222478889999999999999999876
No 365
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.83 E-value=4e-07 Score=89.77 Aligned_cols=255 Identities=14% Similarity=0.113 Sum_probs=158.4
Q ss_pred cccccccCCCCCHHHHHHHHHHHHcCCCC--CCCCCCC-CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 013892 130 ILDRSETQGLFSADSIERAWQILDQIPGR--ATGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (434)
Q Consensus 130 ~l~~~~~~~~~p~~v~~~~~~~l~~~~~~--~~~~Y~~-~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 206 (434)
.++|+.||..+|++|++++.+.+.+.... +....++ +.-..++.+.+.+.+++.++.+-+.+=++++.|++.++..+
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~ 84 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMI 84 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHH
Confidence 67888999999999999998877664320 1222222 12245666666667777777543443456667799999999
Q ss_pred HHHHhcCCCCEEE--EcCCCChh-HHHHHHHcCCeEEEEecCCCCCC--CCCHHHHHHHHHHHHhcCCCeeEEEEecCCC
Q 013892 207 MQLLIRSENDGIL--CPIPQYPL-YSASIALHGGTLVPYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (434)
Q Consensus 207 l~~l~~~~gd~Vl--v~~p~y~~-~~~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~N 281 (434)
...|+ .+||+++ +..-.|.. +...++.+| .+..+......+| .++.+.++ +.+ +.+.|.+++-..
T Consensus 85 ~~Nll-~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~~------d~~~v~~t~NET 154 (364)
T PRK12462 85 PMNFS-RPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELD--WDA------RAPFRHYVSNET 154 (364)
T ss_pred HHHcC-CCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cCC------CCcEEEEccCCC
Confidence 99998 6888654 55555543 455566666 4444432222223 34455541 111 567788887777
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeE
Q 013892 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG 361 (434)
Q Consensus 282 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G 361 (434)
.||+.++ ++.+.++.++|+|.+=.- ... ...+.+ + | +++.|.-|++ |.+|+-
T Consensus 155 stGv~~~--------~~~~~~~~llvvD~sS~~---~s~--pid~~~----~-----d---vi~agsQKnl-gP~Glt-- 206 (364)
T PRK12462 155 VEGLQFP--------DAAGLPDSPLIADMSSDF---MSR--PFDVEA----Y-----G---MVYAHAQKNL-GPAGVT-- 206 (364)
T ss_pred CceEecC--------cccccCCCeEEEEcCchh---hCC--CCChHH----c-----c---EEEeeccccC-CCCceE--
Confidence 8899886 222336899999987553 221 112111 1 2 6677889999 778864
Q ss_pred EEEEecCCHHHHHHHHHH-------------hhcccCCchHHHHHHHHHcCCC--C--CChHHHHHHHHHHHHHHHHHHH
Q 013892 362 YMEVTGFSAEVREQIYKV-------------ASVNLCSNISGQILASLVMSPP--K--VGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 362 ~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~q~~~~~~l~~~--~--~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
.+++ .++.+++.... .+.+..|++..-+++...++.- + -++.+.++.++..+.+++.+++
T Consensus 207 vviv---s~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~ 283 (364)
T PRK12462 207 VAII---RRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDA 283 (364)
T ss_pred EEEE---CHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 4444 77776654321 1234467777777766665431 2 4567778888888888888876
Q ss_pred H
Q 013892 425 R 425 (434)
Q Consensus 425 ~ 425 (434)
.
T Consensus 284 ~ 284 (364)
T PRK12462 284 L 284 (364)
T ss_pred C
Confidence 5
No 366
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.81 E-value=2e-06 Score=84.14 Aligned_cols=202 Identities=17% Similarity=0.205 Sum_probs=139.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHH-HHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRD-TIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~-~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~ 217 (434)
.+.+++++++.+.+...-. . .|.-..|...-|. .+++.+. + -...+.+++++..+.++.+++.++. . +.+
T Consensus 38 ~~~~e~iea~~~~~~~~v~--L-e~~l~~g~~~~R~~~~~~~~~---~-~~~aea~~ivnnn~aAVll~~~al~-~-~~E 108 (395)
T COG1921 38 LYSPEAIEAMKEAMRAPVE--L-ETDLKTGKRGARLTELAELLC---G-LTGAEAAAIVNNNAAAVLLTLNALA-E-GKE 108 (395)
T ss_pred cCCHHHHHHHHHHhcccce--e-eeecccchhhHHHHHHHHHHh---c-ccchhheeeECCcHHHHHHHHhhhc-c-CCe
Confidence 4588899998888776432 3 4444444333222 3344432 2 2346789999999999999999986 3 444
Q ss_pred EEEcC-----CCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCC-CCccCCCHHH
Q 013892 218 ILCPI-----PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN-PTGQVLAEEN 291 (434)
Q Consensus 218 Vlv~~-----p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~N-PtG~~~~~~~ 291 (434)
|++.- +..++..++++..|++++.+-... .....+++.+|.+ ++.+++-.+-+| +-=..++
T Consensus 109 vVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn----~t~~~d~~~AIne------~ta~llkV~s~~~~f~~~l~--- 175 (395)
T COG1921 109 VVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTTN----RTHLKDYELAINE------NTALLLKVHSSNYGFTGMLS--- 175 (395)
T ss_pred EEEEccccccCCCCChhHHHHHcCCEEEEecccC----cCCHHHHHHHhcc------CCeeEEEEeecccccccccc---
Confidence 44322 688899999999999999986543 3468889999988 787777665444 2222334
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~ 371 (434)
.++++++|+++|+++|+|.+-...+-.. +.....+. ++ .| +++.|=-|.| | |-+.|.++. .++
T Consensus 176 ~~~l~~ia~~~~lpvivD~aSg~~v~~e----~~l~~~la-~G---aD---LV~~SgdKll-g--GPqaGii~G---kKe 238 (395)
T COG1921 176 EEELVEIAHEKGLPVIVDLASGALVDKE----PDLREALA-LG---AD---LVSFSGDKLL-G--GPQAGIIVG---KKE 238 (395)
T ss_pred HHHHHHHHHHcCCCEEEecCCccccccc----cchhHHHh-cC---CC---EEEEecchhc-C--CCccceEec---hHH
Confidence 7889999999999999999887754321 22222222 12 44 7788999988 4 899999976 999
Q ss_pred HHHHHHHH
Q 013892 372 VREQIYKV 379 (434)
Q Consensus 372 ~~~~l~~~ 379 (434)
+++.+++.
T Consensus 239 lI~~lq~~ 246 (395)
T COG1921 239 LIEKLQSH 246 (395)
T ss_pred HHHHHHhh
Confidence 99998765
No 367
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.81 E-value=3.2e-07 Score=99.01 Aligned_cols=169 Identities=21% Similarity=0.236 Sum_probs=114.9
Q ss_pred CCCCCC---CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh---cC----CCCEEEEcCCCChhHH
Q 013892 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI---RS----ENDGILCPIPQYPLYS 229 (434)
Q Consensus 160 ~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~---~~----~gd~Vlv~~p~y~~~~ 229 (434)
.+-|.| ++|+.++...+.+++.+..|.+.. .+.-.+|+ .+-...+.++. .. ..++|+++.-.|....
T Consensus 529 ~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~--Sl~p~sGA-~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp 605 (954)
T PRK12566 529 LHPFAPREQAEGYRAMIDELEAWLCAITGFDAI--CMQPNSGA-QGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP 605 (954)
T ss_pred CCCCCchhhhcCHHHHHHHHHHHHHHHHCCCeE--eecCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence 467888 889999999999999888885433 22223333 33323333322 11 2367899998885545
Q ss_pred HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 013892 230 ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (434)
Q Consensus 230 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 309 (434)
..+...|.+++.++.++++ .+|+++|++++++. ..++.+|.+++|++-.+. .+++++|+++|+++|.++++|
T Consensus 606 asa~~~GieVv~Vp~D~~G--~iDle~L~a~I~~~---~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~Galv~vD 677 (954)
T PRK12566 606 ASAQMAGMRVVIVECDPDG--NVDLDDLKAKAAAA---GDRLSCLMITYPSTHGVY---EEGIREICEVVHQHGGQVYMD 677 (954)
T ss_pred HHHHHCCCEEEEeccCCCC--CcCHHHHHHHhhcc---CCCEEEEEEEecCcCcee---cchHHHHHHHHHHcCCEEEEE
Confidence 5577889999999998543 79999999999732 126778888888874433 456999999999999999999
Q ss_pred cCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCC
Q 013892 310 EVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY 353 (434)
Q Consensus 310 eay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~ 353 (434)
.+...-... .... .+++ -| |++.++.|+|.
T Consensus 678 gA~~~a~~~----l~~P----g~~G---AD---i~~~s~HKtf~ 707 (954)
T PRK12566 678 GANLNAQVG----LARP----ADIG---AD---VSHMNLHKTFC 707 (954)
T ss_pred eeChhhccC----CCCh----hhcC---CC---EEEecCCcccC
Confidence 988521111 1111 1222 34 78889999883
No 368
>PLN02452 phosphoserine transaminase
Probab=98.79 E-value=6.5e-07 Score=88.90 Aligned_cols=255 Identities=13% Similarity=0.071 Sum_probs=161.0
Q ss_pred cccccccCCCCCHHHHHHHHHHHHcCCCC--CCCCCCC-CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 013892 130 ILDRSETQGLFSADSIERAWQILDQIPGR--ATGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (434)
Q Consensus 130 ~l~~~~~~~~~p~~v~~~~~~~l~~~~~~--~~~~Y~~-~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 206 (434)
.++|+.||..+|++|++++.+.+.+.... +....++ +.-..++.+.+.+.+.+.++.+-+.+-+++..|++.++..+
T Consensus 8 ~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~ 87 (365)
T PLN02452 8 VFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAI 87 (365)
T ss_pred eEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHH
Confidence 56788888899999999988776442210 1111221 12245666666667766667543334466778999999999
Q ss_pred HHHHhcCCCCEEEEcCCCChh--HHHHHHHcCCeEEEEecCCCCCC--CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCC
Q 013892 207 MQLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (434)
Q Consensus 207 l~~l~~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NP 282 (434)
+..|+ .+|+++++..-+..+ +.+.++.+|...+..... ..+| .+++++++. ..+.+.|.+++-...
T Consensus 88 ~~nl~-~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~v~~~hnETs 157 (365)
T PLN02452 88 PLNLC-KPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGK-DEKYTKIPSVSEWEL--------TPDAKFVHICANETI 157 (365)
T ss_pred HHhcC-CCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecC-CCCCCCCCChHHcCC--------CCCCcEEEECCCCCC
Confidence 99998 688888877655543 556677788644443221 2222 356666421 125778888888888
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEE
Q 013892 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (434)
Q Consensus 283 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~ 362 (434)
||+.+. +++++. ++++|+|.+-.- ... ...+. .+ + ++ +.|.-|.+ |.+| +|.
T Consensus 158 tGv~~~--~~~~i~------~~~lvVDa~Ss~---g~~--pidv~----~~-----~--v~-~~saqK~l-GP~G--l~~ 209 (365)
T PLN02452 158 HGVEFK--DYPDVG------NVPLVADMSSNF---LSK--PVDVS----KY-----G--VI-YAGAQKNV-GPSG--VTI 209 (365)
T ss_pred CcEecC--cccccC------CCeEEEECCccc---cCc--ccCHH----Hc-----C--EE-EEeccccc-CCCC--eEE
Confidence 999643 244443 379999998764 222 11211 11 2 33 46999999 8888 566
Q ss_pred EEEecCCHHHHHHHHHH-------------hhcccCCchHHHHHHHHHcCCC--C-CChHHHHHHHHHHHHHHHHHHHH
Q 013892 363 MEVTGFSAEVREQIYKV-------------ASVNLCSNISGQILASLVMSPP--K-VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 363 ~~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~q~~~~~~l~~~--~-~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++ .+++++++... .+.+..|+...-+++...++.- + -++...+++++..+.+++.|++.
T Consensus 210 v~v---r~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~ 285 (365)
T PLN02452 210 VII---RKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDES 285 (365)
T ss_pred EEE---cHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 666 77777665321 1123467777777766666532 2 36778888899999999998874
No 369
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.70 E-value=5.6e-06 Score=84.43 Aligned_cols=270 Identities=13% Similarity=0.098 Sum_probs=140.9
Q ss_pred CCccccccc-----CCCCCHHHH--HHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 128 PSILDRSET-----QGLFSADSI--ERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 128 p~~l~~~~~-----~~~~p~~v~--~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
...||+..+ -..-+|.++ +++.+.+.+... ....+. ....+.+ ..+++.+.+..+ +-..+.++++++++
T Consensus 38 ~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~-~~~~~~-~~~~~~~-~~l~~~l~~~~~-~~~~~~v~f~~sGs 113 (431)
T TIGR03251 38 RRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAV-NKPSNS-DVYTVAM-ARFVDTFARVLG-DPALPHLFFIEGGA 113 (431)
T ss_pred CChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhh-cccccC-CCCCHHH-HHHHHHHHHhcC-CCCcCEEEEeCCcH
Confidence 345666544 234467788 777777765310 000110 0112222 233333332211 11346899999999
Q ss_pred HHHHHHHHHHhc---------C-C---CCEEEEcCCCChhHHHHHHH-cCCeEE---EEecC-------C-------CCC
Q 013892 201 PAVHMMMQLLIR---------S-E---NDGILCPIPQYPLYSASIAL-HGGTLV---PYYLD-------E-------ATG 249 (434)
Q Consensus 201 ~al~~~l~~l~~---------~-~---gd~Vlv~~p~y~~~~~~~~~-~g~~~~---~~~~~-------~-------~~~ 249 (434)
+|+..+++.... . + +.+|+...-+|.+....... .|.... ..+.. . ...
T Consensus 114 EAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 193 (431)
T TIGR03251 114 LAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPN 193 (431)
T ss_pred HHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccc
Confidence 999999887631 0 1 36799999888876544332 231100 01110 0 000
Q ss_pred CC-------CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCC
Q 013892 250 WG-------LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK 321 (434)
Q Consensus 250 ~~-------~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 321 (434)
+. -+++++++.+.. .+.++.++++.-.+.-.|.+ .+++.+++|.++|++||+++|+||++.++...+.
T Consensus 194 ~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~- 269 (431)
T TIGR03251 194 LDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGT- 269 (431)
T ss_pred cchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccch-
Confidence 00 023334444432 12257676666445556765 5778999999999999999999999998644432
Q ss_pred CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH---H---HhhcccCCchHHHHHHH
Q 013892 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY---K---VASVNLCSNISGQILAS 395 (434)
Q Consensus 322 ~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~---~---~~~~~~~~~~~~q~~~~ 395 (434)
+..+ ..++ ..|| ++ +++|.+ . . +|++. ..++.+... . ....+.+.++++.+++.
T Consensus 270 -~~a~----~~~g-v~PD--i~---~~gK~~-~--~--~g~~~----~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~ 329 (431)
T TIGR03251 270 -AWAY----QQLG-VQPD--IV---AFGKKT-Q--V--CGIMA----GRRVDEVADNVFAVPSRLNSTWGGNLVDMVRAT 329 (431)
T ss_pred -HHHH----HhcC-CCCC--EE---EecccC-c--c--ceEEe----cchHHHhhhhcccCccccCCCCCCCHHHHHHHH
Confidence 1111 1111 2367 23 478976 2 1 35553 222212111 1 12234456777777776
Q ss_pred HHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 396 LVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 396 ~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
..|+--+. +...+..++.-+.+.+.|++..
T Consensus 330 a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~ 359 (431)
T TIGR03251 330 RILEIIEE-ERLVDNARVQGAHLLARLHELA 359 (431)
T ss_pred HHHHHHHh-cCHHHHHHHHHHHHHHHHHHHH
Confidence 66653111 1344555666666666666543
No 370
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.69 E-value=2.9e-07 Score=86.51 Aligned_cols=251 Identities=16% Similarity=0.164 Sum_probs=146.8
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc----
Q 013892 137 QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---- 212 (434)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~---- 212 (434)
.....|.+++++.+..+...-.+..-|. .+.-+.++++...+| .+.++-++-+.+|...++....+
T Consensus 73 qGhchpki~~aLqeq~~kLtlssrafYn------d~~~~f~~~vt~lf~----~~kvlpmnTGaEa~Eta~KLaR~wgy~ 142 (427)
T KOG1402|consen 73 QGHCHPKIIKALQEQADKLTLSSRAFYN------DVLGEFAEYVTKLFG----YDKVLPMNTGAEAVETACKLARKWGYR 142 (427)
T ss_pred cCCCCHHHHHHHHHHHhHhhhhhHHHhh------hhHHHHHHHHHHhcC----cceeeecccchhHHHHHHHHHHHHHHh
Confidence 4466888999988877654211112232 333344444444444 45677676668999888876531
Q ss_pred -C--CCC-E-EEEcCCCChhHHHH----------HHHcC----CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeE
Q 013892 213 -S--END-G-ILCPIPQYPLYSAS----------IALHG----GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRA 273 (434)
Q Consensus 213 -~--~gd-~-Vlv~~p~y~~~~~~----------~~~~g----~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~ 273 (434)
+ |.+ . |+...-+|.+-.-. .+.+| ..+..+|. + |.++|+.++++- +.++
T Consensus 143 ~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y------~-d~eale~~l~~~-----~vaa 210 (427)
T KOG1402|consen 143 KKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY------G-DAEALEVALKSP-----NVAA 210 (427)
T ss_pred hccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc------C-CHHHHHHHhcCC-----CeeE
Confidence 1 322 2 33333333321111 01111 00111111 1 789999998872 5666
Q ss_pred EEEecCCCCCccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCC
Q 013892 274 LVVINPGNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGY 352 (434)
Q Consensus 274 i~l~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~ 352 (434)
+++.--+-.-|++.|+. .++++.++|.+|++++|.||+..++...+. +... +..+..|| +|. |.|.|
T Consensus 211 FivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk--~la~-----d~env~PD--ivi---lgKal 278 (427)
T KOG1402|consen 211 FIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK--LLAC-----DYENVRPD--IVI---LGKAL 278 (427)
T ss_pred EEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc--EEEe-----ehhhcCCC--eEE---Eeccc
Confidence 55554488889877664 799999999999999999999999777664 3221 12223366 333 46888
Q ss_pred CCCCC-ceeEEEEEecCCHHHHHHHHHH-hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 353 YGECG-KRGGYMEVTGFSAEVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 353 ~g~~G-~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+| | ..+..+++ +.+++-.+.-. +..++..++++.+++.+.|+--.+ +.+.++-.+--+.++..|.++..
T Consensus 279 SG--G~~Pvsavl~---~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~e-ekL~era~~lG~~l~~~L~~l~~ 349 (427)
T KOG1402|consen 279 SG--GVYPVSAVLA---DDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVE-EKLVERAAKLGEILRDQLNKLQK 349 (427)
T ss_pred cC--CeeeeEEEEe---cHHHHhccCCCccccccCCChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccc
Confidence 64 5 57888877 88888776443 235567888888887777642100 23344444444555555555443
No 371
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.56 E-value=4e-06 Score=78.06 Aligned_cols=183 Identities=19% Similarity=0.235 Sum_probs=122.1
Q ss_pred CCCCCCC-cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcC-CCChhHHHH------
Q 013892 160 TGAYSHS-QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSAS------ 231 (434)
Q Consensus 160 ~~~Y~~~-~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~-p~y~~~~~~------ 231 (434)
..+|+.. -|-..|.+-.|+-+ |.....=+.-+.+ +++||..++..++ .|||+.+.-. --|......
T Consensus 57 stGYGydD~GRdtLe~vyA~vf----~aE~a~VRpq~is-GTHAI~~aLfg~L-RpgDell~i~G~PYDTLeevIG~rg~ 130 (416)
T COG4100 57 STGYGYDDLGRDTLERVYAQVF----GAEAALVRPQIIS-GTHAIACALFGIL-RPGDELLYITGSPYDTLEEVIGLRGE 130 (416)
T ss_pred CCCCCccccchhHHHHHHHHHh----ccccceeeeeeec-chhHHHHHHHhcc-CCCCeEEEecCCcchhHHHHhccCCC
Confidence 4555543 34445555555554 4221111223444 5699999998888 6999876433 334444443
Q ss_pred ----HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-cCCCCCccCCCHHHHHHHHHHHHHc--CC
Q 013892 232 ----IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKE--GL 304 (434)
Q Consensus 232 ----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~~~~~--~~ 304 (434)
++.+|.....+++..++ .+|.+.++.++++ ++|+|.+. +-+.----.++.+++++++++.++- ++
T Consensus 131 ~~gSL~dfgi~Y~~v~Lt~~g--kiD~~~v~~~i~~------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ 202 (416)
T COG4100 131 GQGSLKDFGIKYKAVPLTADG--KIDIQAVKTAISD------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNV 202 (416)
T ss_pred CcccHHHhCcceeecccccCC--cccHHHHHHhcCc------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCE
Confidence 45567778888888654 8999999999998 89999988 3333222357888999999999975 79
Q ss_pred EEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCc--eeEEEEEecCCHHHHHHH
Q 013892 305 VLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK--RGGYMEVTGFSAEVREQI 376 (434)
Q Consensus 305 ~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~--R~G~~~~~~~~~~~~~~l 376 (434)
++++|.+|++|+-..++ .. .+ -| +..+|+-|+-.| |+ -+||+.. .++++++.
T Consensus 203 ivFVDNCYGEFvE~~EP--t~-------vG---aD---liAGSLIKNpGG--giaktGGYiaG---k~~~ve~~ 256 (416)
T COG4100 203 IVFVDNCYGEFVEEKEP--TH-------VG---AD---LIAGSLIKNPGG--GIAKTGGYIAG---KAELVEAA 256 (416)
T ss_pred EEEEeccchhhhhccCc--cc-------cc---hh---hhccceeeCCCC--ceeeccceeec---hHHHHHhh
Confidence 99999999996654431 11 11 23 678999998743 43 6789865 77777765
No 372
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.50 E-value=3e-06 Score=82.70 Aligned_cols=145 Identities=20% Similarity=0.246 Sum_probs=110.5
Q ss_pred CCCCCC---CcchHHHHHHHHHHHHhhcCCCCCCCCEEEc--CChHHHH--HHHHHHHhcCC----CCEEEEcCCCChhH
Q 013892 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLT--DGASPAV--HMMMQLLIRSE----NDGILCPIPQYPLY 228 (434)
Q Consensus 160 ~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t--~G~~~al--~~~l~~l~~~~----gd~Vlv~~p~y~~~ 228 (434)
.+-|.| .+|+.++...+.+|+.+.-|+ |.|-+. +|++.=. .++++.+.... .+.||||+-.|..-
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~----DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN 170 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKEITGM----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN 170 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhcCC----ceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC
Confidence 455555 468999999999999887663 334433 3443222 23334443222 36899999999999
Q ss_pred HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
...+...|.+++.+++++++ .+|+++|++++.+ ++.++.|+||+. .|.. ++.+++|+++.+++|..|..
T Consensus 171 PASAam~G~~VV~V~~~~~G--~VDlddLk~k~~~------~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~ 239 (496)
T COG1003 171 PASAAMAGFKVVVVKCDENG--NVDLDDLRAKAED------NLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYY 239 (496)
T ss_pred hhhHhhcCceEEEEecCCCC--CccHHHHHHHhcc------ceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEe
Confidence 99999999999999998775 7899999999987 899999999976 5543 57899999999999999999
Q ss_pred ccCCCCCccCC
Q 013892 309 DEVYQENVYVP 319 (434)
Q Consensus 309 Deay~~~~~~~ 319 (434)
|.+-..-+.+-
T Consensus 240 DGANlNA~vG~ 250 (496)
T COG1003 240 DGANLNAIVGL 250 (496)
T ss_pred cCcchhhhhcc
Confidence 99876544443
No 373
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.47 E-value=1.3e-05 Score=88.39 Aligned_cols=172 Identities=17% Similarity=0.187 Sum_probs=113.4
Q ss_pred CCCCCCC-----cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCC--CCEEEEcCCCChhHHHHH
Q 013892 160 TGAYSHS-----QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE--NDGILCPIPQYPLYSASI 232 (434)
Q Consensus 160 ~~~Y~~~-----~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~--gd~Vlv~~p~y~~~~~~~ 232 (434)
...|.|. +|..+..-.....+.+..| .+..++.+..+++++...++.++...+ +++|++++-.|+.+...+
T Consensus 105 ~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG--~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~ 182 (954)
T PRK05367 105 YTAYTPYQPEISQGRLEALLNFQTMVADLTG--LEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVL 182 (954)
T ss_pred hhccCCCChHHHHHHHHHHHHHHHHHHHHHC--CChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHH
Confidence 5566664 3544433333333333334 678899999999999998887764234 489999999999877654
Q ss_pred ----HHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 233 ----ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 233 ----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
+..|++++.++.+++ ++ .+ ++.++++.+|+ -+|.+.+ +++|+++|+++|+++++
T Consensus 183 ~t~a~~~G~ev~~~~~~~d----~~--------~~------~~~~vlvq~p~-~~G~i~d---~~~i~~~ah~~Gal~~v 240 (954)
T PRK05367 183 RTRAEPLGIEVVVGDAAKA----LD--------HD------DVFGVLLQYPG-TSGEVRD---YTALIAAAHARGALVAV 240 (954)
T ss_pred HHHHHhCCCEEEEecCccC----CC--------cc------cEEEEEEecCC-CCeeecc---HHHHHHHHHHcCCEEEE
Confidence 557999999987531 11 11 46566666775 4999987 99999999999999999
Q ss_pred ccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCC-----CCCCCCceeEEEEEecCCHHHHHHH
Q 013892 309 DEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKG-----YYGECGKRGGYMEVTGFSAEVREQI 376 (434)
Q Consensus 309 Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~-----~~g~~G~R~G~~~~~~~~~~~~~~l 376 (434)
|.....+..... ..+++ -| |+++|.-|. | |=|| .|++.+ .+++...+
T Consensus 241 da~~~Al~~l~~---------pge~G---aD---i~vgs~qkfg~P~g~-GGP~--aGflav---r~~~~r~l 292 (954)
T PRK05367 241 AADLLALTLLTP---------PGEMG---AD---IAVGSAQRFGVPMGF-GGPH--AAYFAV---RDAYKRSM 292 (954)
T ss_pred EehhhhccCCCC---------hhhcC---CC---EEEeeCcccCCCCCC-CCCC--EEEEEE---CHHHHhhC
Confidence 874422211111 12233 34 677777774 5 3244 888876 56655554
No 374
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.42 E-value=5.8e-07 Score=87.11 Aligned_cols=208 Identities=16% Similarity=0.185 Sum_probs=41.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHH-HHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRD-TIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~-~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~ 217 (434)
.+++++++++.+...... ...|.-..|-..-|. .+.+.+... ...+..+++++...|+.+++..++ .|.+
T Consensus 17 ~l~~~a~~a~~~~a~~Y~---nLE~dl~~G~Rg~R~~~v~~ll~~l----tgAeaA~VvNnnaAAv~L~l~~la--~~~E 87 (367)
T PF03841_consen 17 PLSEEAIEAVAEVASGYS---NLEYDLETGKRGSRYAHVEELLCEL----TGAEAALVVNNNAAAVLLALNTLA--KGKE 87 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccc---ccccccccccccccccccccccccc----cccccccccccccccccccccccc--cccc
Confidence 457778887776654431 344443333322221 223333222 235677888888899999999986 5778
Q ss_pred EEEcCCCCh------hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH-H
Q 013892 218 ILCPIPQYP------LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE-E 290 (434)
Q Consensus 218 Vlv~~p~y~------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~-~ 290 (434)
|+++.-.-. .+.++++..|++++.+-... ...+++++++|++ ++.+|+-.+++|-.-.-++. -
T Consensus 88 vIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e------~Ta~ll~Vh~Sn~~i~GFt~~~ 157 (367)
T PF03841_consen 88 VIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITE------NTAALLKVHTSNFRIQGFTGEV 157 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccc----ccccccccccccc------cccccccccccccccccccccc
Confidence 887653222 35677888999999886542 4467889999998 79888888998874332221 2
Q ss_pred HHHHHHHHHHHcCCEEEEccCCCCCc----cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 291 NQRAIVDFCKKEGLVLLADEVYQENV----YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 291 ~l~~i~~~~~~~~~~li~Deay~~~~----~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
.++++++++++|++++|+|-.-+.+. |+-. ..+++... +. ...| +++.|=-|.+ | |-..|.++.
T Consensus 158 ~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~-~Ep~v~~~---~~-~GaD---lV~fSGdKlL-G--GPQaGiI~G- 225 (367)
T PF03841_consen 158 SLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLP-DEPTVQEY---LA-AGAD---LVTFSGDKLL-G--GPQAGIIVG- 225 (367)
T ss_dssp ---HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------C---CC-CT-S---EEEEETTSSS-S--S-S-EEEEE-
T ss_pred cHHHHHHHHhhcCCcEEEECCCCCCcCcccccCc-cccHHHHH---hh-cCCC---EEEEECCCcC-C--CCCeEEEEe-
Confidence 58999999999999999998653321 1100 01122111 11 1234 6777889988 4 666899977
Q ss_pred cCCHHHHHHHHHH
Q 013892 367 GFSAEVREQIYKV 379 (434)
Q Consensus 367 ~~~~~~~~~l~~~ 379 (434)
.+++++++++.
T Consensus 226 --kk~lI~~lk~~ 236 (367)
T PF03841_consen 226 --KKELIEKLKKH 236 (367)
T ss_dssp --EHHHHHHHHHH
T ss_pred --CHHHHHHHhhC
Confidence 99999999764
No 375
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.41 E-value=2e-05 Score=86.76 Aligned_cols=191 Identities=15% Similarity=0.113 Sum_probs=118.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCC--cc----hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHS--QG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~--~G----~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~ 212 (434)
.+|+.+.+.+.+...... ..+.|.+. +| +.++++.|++++ | .+++++.++.|+|++...++.++..
T Consensus 116 ~~P~~v~~~i~~~~~~~T--aytPYqaEisQG~lqal~~~Qt~ia~Lt----G--~~~anaSL~d~aTAaaea~~~a~~~ 187 (993)
T PLN02414 116 HVPPVILRNILENPGWYT--QYTPYQAEIAQGRLESLLNYQTMITDLT----G--LPMSNASLLDEGTAAAEAMAMCNNI 187 (993)
T ss_pred cCCHHHHHHHHhChHHHh--hcCCCchHHHHHHHHHHHHHHHHHHHHh----C--CChhhEeecCChHHHHHHHHHHHhc
Confidence 456666677655443222 14445543 45 345666666665 4 6789999999999999988777643
Q ss_pred CC--CCEEEEcCCCChhHHHHHH----HcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC
Q 013892 213 SE--NDGILCPIPQYPLYSASIA----LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (434)
Q Consensus 213 ~~--gd~Vlv~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~ 286 (434)
.+ +++|++++-.|+.+...++ ..|++++.++.+.. + ...+ .+-.+++.+|++ +|.+
T Consensus 188 ~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~------~v~~vlvq~P~~-~G~v 249 (993)
T PLN02414 188 LKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSG------DVCGVLVQYPAT-DGEV 249 (993)
T ss_pred ccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccC------ceEEEEEecCCC-CeEE
Confidence 43 4789999999998776654 45999998886431 1 0011 343455556655 9999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCC--CCCCceeEEEE
Q 013892 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY--GECGKRGGYME 364 (434)
Q Consensus 287 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~--g~~G~R~G~~~ 364 (434)
.+ +++|+++|+++|+++++ .+..- .... ..+ ..+++ -| |++++--|... |..|=+.|++.
T Consensus 250 ~d---v~~I~~~ah~~GaL~iV-aad~l-al~~---l~~----pge~G---AD---i~vgsgqKwg~P~G~GGP~aGfla 311 (993)
T PLN02414 250 LD---YAEFVKNAHANGVKVVM-ATDLL-ALTM---LKP----PGEWG---AD---IVVGSAQRFGVPMGYGGPHAAFLA 311 (993)
T ss_pred cC---HHHHHHHHHHcCCEEEE-EECHH-HhcC---CCC----Hhhcc---Cc---EEEECCCccccCCCCCCCCeeEEE
Confidence 87 99999999999999999 32211 1111 111 12222 34 66777666320 11255589987
Q ss_pred EecCCHHHHHHH
Q 013892 365 VTGFSAEVREQI 376 (434)
Q Consensus 365 ~~~~~~~~~~~l 376 (434)
+ .+++...+
T Consensus 312 v---r~~~~r~~ 320 (993)
T PLN02414 312 T---SQEYKRLM 320 (993)
T ss_pred E---CHHHHhhC
Confidence 6 55554433
No 376
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.40 E-value=9.3e-06 Score=76.59 Aligned_cols=219 Identities=16% Similarity=0.162 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-CCCCEEEEcCCC-Chh----HHHHHHHcCCeEEEEec
Q 013892 171 GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGILCPIPQ-YPL----YSASIALHGGTLVPYYL 244 (434)
Q Consensus 171 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-~~gd~Vlv~~p~-y~~----~~~~~~~~g~~~~~~~~ 244 (434)
++-+.+.+.+...-| ..+.+++++.+.+-.++.++.+.++ .+|++|++++-. |+. ....++..|.. +.+
T Consensus 76 ~lp~~lgdklApLiG--A~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~ 150 (407)
T COG3844 76 DLPERLGDKLAPLIG--ARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDL 150 (407)
T ss_pred hchhHHHHHhhhhhc--CCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---ccc
Confidence 334444444444334 6788999999999999988888764 458899988743 332 22234444433 221
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
. -.+.++++++++++ ++.+|++++.+.-||+.++ +.+|-++++++|++++-|-+|+-..+.-+
T Consensus 151 ~----~~~~P~~~~~~~~d------d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGavp~~---- 213 (407)
T COG3844 151 E----GVIAPRALEEAITD------DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAVPVD---- 213 (407)
T ss_pred e----eeeChHHHHHhhcc------ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCccee----
Confidence 1 14467789999988 8989999999999999999 89999999999999999999987544321
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH-------------------HH----hh
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY-------------------KV----AS 381 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~-------------------~~----~~ 381 (434)
+....-| +-|++--|.+.|=||-..|..+. + ...+... .- ..
T Consensus 214 --------Lh~~gaD---faigcsyKYLNgGPGapa~l~v~---~-~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~r 278 (407)
T COG3844 214 --------LHAAGAD---FAIGCSYKYLNGGPGAPAGLFVA---P-RHRERSWPPLSGWWGHARPFAMEEVYAPGPGARR 278 (407)
T ss_pred --------ecccCCC---eeeeeeceeccCCCCCceeEEec---c-ccccccccccccccCCCCcchhhhccCcCccccc
Confidence 1111123 56788889888888887776653 1 1111110 00 11
Q ss_pred -cccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 382 -VNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 382 -~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
....++.++..++...|+-. -.+.+.+++-..--+.+.+.++.+.
T Consensus 279 f~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~ 326 (407)
T COG3844 279 FLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARC 326 (407)
T ss_pred eeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhcc
Confidence 22345555555555555432 1245666666666666666666543
No 377
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.37 E-value=7e-06 Score=79.09 Aligned_cols=201 Identities=17% Similarity=0.159 Sum_probs=135.5
Q ss_pred CCccccccc---CCCCCHHHHHHHHHHHHcCCCC---CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 128 PSILDRSET---QGLFSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 128 p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
.+.+||.+. ...-.+++.+.+...++..+.+ ..+-|+...-..++.+.||+|+ | .++.|+-..|- .
T Consensus 94 ~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~----G---~E~aivYs~gF-~ 165 (467)
T KOG1358|consen 94 KDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM----G---TEDAIVYSYGF-S 165 (467)
T ss_pred ceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh----C---Ccceeeecccc-c
Confidence 345666655 4556788889998888886431 1234777766788999999998 3 45567666665 5
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHH---hcCC---Cee-EE
Q 013892 202 AVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK---AKGI---TVR-AL 274 (434)
Q Consensus 202 al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~g~---~~~-~i 274 (434)
++..++.+++ +.||-|.+.+-........++...-.+.++..+ |.++|+..+.+.. .+.+ .+| .|
T Consensus 166 ti~S~ipafs-KrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~Rrfi 237 (467)
T KOG1358|consen 166 TIESAIPAFS-KRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALTRRFI 237 (467)
T ss_pred hhhhcchhhh-ccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccceEEE
Confidence 6666777888 799999999988888888888888788877643 6777766654321 1111 223 44
Q ss_pred EEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCC
Q 013892 275 VVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY 353 (434)
Q Consensus 275 ~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~ 353 (434)
++.----+||.+.+ +.+|+++..++...||.||.|+..+.+..+. .+.....-...++. ++++|++-+++
T Consensus 238 v~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~Gr-----GvteH~~v~~~~iD-iv~~sm~~ala 307 (467)
T KOG1358|consen 238 VVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGR-----GVTEHFGVPITDID-IVTASMETALA 307 (467)
T ss_pred EEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCc-----cccccCCCCcccee-eeeeccccccc
Confidence 44433445999999 9999999999999999999999777665321 11111110012222 77888888773
No 378
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.09 E-value=0.00011 Score=71.64 Aligned_cols=153 Identities=16% Similarity=0.152 Sum_probs=107.6
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-CCC----------CE-EEEcCCCChh
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEN----------DG-ILCPIPQYPL 227 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-~~g----------d~-Vlv~~p~y~~ 227 (434)
...|.-..+..-..+.+-..+.+..|++...|.|+--.|+...++.+..+-.. -|+ +- +.+++-+|.+
T Consensus 130 ~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYS 209 (510)
T KOG0629|consen 130 MFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYS 209 (510)
T ss_pred CceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhh
Confidence 45565555444445555555555668777767787777777777766554211 121 23 3456678888
Q ss_pred HHHHHHHcC---CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCC
Q 013892 228 YSASIALHG---GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL 304 (434)
Q Consensus 228 ~~~~~~~~g---~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~ 304 (434)
....+..+| -.++.++.++.+ .+++++|++.|-+++++|..+-.|-.+....--|..=+ +..|+++|++|++
T Consensus 210 i~kaAa~lg~gtd~c~~v~t~e~G--km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadiC~k~~l 284 (510)
T KOG0629|consen 210 IKKAAAFLGLGTDHCIKVKTDERG--KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADICEKHKL 284 (510)
T ss_pred HHHHHHHhccCCceeEEecccccC--ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHHHHhcCE
Confidence 889999988 578888888764 79999999999999888755533333333555676644 9999999999999
Q ss_pred EEEEccCCCCCcc
Q 013892 305 VLLADEVYQENVY 317 (434)
Q Consensus 305 ~li~Deay~~~~~ 317 (434)
|+.+|.+|++...
T Consensus 285 WmHvDAAwGGglL 297 (510)
T KOG0629|consen 285 WMHVDAAWGGGLL 297 (510)
T ss_pred EEEeecccccccc
Confidence 9999999998443
No 379
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.06 E-value=5.8e-05 Score=70.40 Aligned_cols=263 Identities=17% Similarity=0.183 Sum_probs=153.7
Q ss_pred cCCCChhHHHHHHhhc---CCCCccccccc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhh
Q 013892 110 LGQQPITFFREVLALC---DHPSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEAR 183 (434)
Q Consensus 110 ~~~~p~~~~r~v~~~~---~~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~ 183 (434)
...+|+..+|...... +....||.-.| .....|+|+++....+..... ...+.. .+|.+.........
T Consensus 26 y~sDP~kivRaq~QYmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~t--N~RFlh----d~lv~cA~~l~stl 99 (452)
T KOG1403|consen 26 YRSDPLKIVRAQGQYMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATIST--NNRFLH----DELVQCARTLTSTL 99 (452)
T ss_pred ecCCchhhehhccceeeccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcc--cchhhH----HHHHHHHHHHhhcC
Confidence 3446666666544332 22335554444 556789999998877765432 333332 23333333333221
Q ss_pred cCCCCCCCCEEEcCChHHHHHHHHHHHhc--CCCCEEEEcCCCChhHHH-HHHHc------CC---e--EEEE-ecCC--
Q 013892 184 DGFPADPNDIFLTDGASPAVHMMMQLLIR--SENDGILCPIPQYPLYSA-SIALH------GG---T--LVPY-YLDE-- 246 (434)
Q Consensus 184 ~g~~~~~~~i~~t~G~~~al~~~l~~l~~--~~gd~Vlv~~p~y~~~~~-~~~~~------g~---~--~~~~-~~~~-- 246 (434)
..-+-+++++++++|..++++.... +..| |++.+-.|.++.. .++.. |. + .+.+ |+.+
T Consensus 100 ----PeLsvc~F~NSGSEANDLALRLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvy 174 (452)
T KOG1403|consen 100 ----PELSVCFFVNSGSEANDLALRLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVY 174 (452)
T ss_pred ----CCceEEEEecCCchhhHHHHHHHHhhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccc
Confidence 1235678999999999999987541 3344 4445555554433 22221 11 1 1111 1110
Q ss_pred CCCC-----------CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHH-HHHHHHHHHHHcCCEEEEccCCCC
Q 013892 247 ATGW-----------GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 247 ~~~~-----------~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
.+.| ..-.+.+++.+++..++|..+.+.+-..-+.-.|.++|+. ..+++++..+.+|.+.|.||+.-+
T Consensus 175 rGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvG 254 (452)
T KOG1403|consen 175 RGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVG 254 (452)
T ss_pred ccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhc
Confidence 0000 1224667777777777665555544445566677777765 689999999999999999999999
Q ss_pred CccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh--h-cccCCchHHH
Q 013892 315 NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA--S-VNLCSNISGQ 391 (434)
Q Consensus 315 ~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~--~-~~~~~~~~~q 391 (434)
|..-+. .++++. +-.-.|| | -++.|.+ | .|..++.++. .+++.+++..-. . .+++.++.+.
T Consensus 255 FGRvG~-hyWafq-----~y~fiPD---I--VtmgKpm-G-NGhPVa~Vat---tkeIA~Af~atgv~YFNTyGGnPVsC 318 (452)
T KOG1403|consen 255 FGRVGS-HYWAFQ-----TYNFIPD---I--VTMGKPM-G-NGHPVAAVAT---TKEIAQAFHATGVEYFNTYGGNPVSC 318 (452)
T ss_pred ccccch-hhhhhh-----hhccccc---h--heecccC-C-CCCeeeEEec---cHHHHHHhccccceehhccCCCchhH
Confidence 544332 133332 1112255 2 3678999 6 7999999987 899999886532 2 3446677777
Q ss_pred HHHHHHcC
Q 013892 392 ILASLVMS 399 (434)
Q Consensus 392 ~~~~~~l~ 399 (434)
+++...|+
T Consensus 319 Av~laVm~ 326 (452)
T KOG1403|consen 319 AVGLAVMR 326 (452)
T ss_pred HHHHHHHH
Confidence 77666665
No 380
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.06 E-value=0.00027 Score=69.41 Aligned_cols=232 Identities=17% Similarity=0.175 Sum_probs=126.8
Q ss_pred HHHHHHHHHHhhcCCCCCCCCEEEcCChHHH-HHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCC-CC
Q 013892 172 LRDTIAAGIEARDGFPADPNDIFLTDGASPA-VHMMMQLLI-RSENDGILCPIPQYPLYSASIALHGGTLVPYYLDE-AT 248 (434)
Q Consensus 172 lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a-l~~~l~~l~-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~ 248 (434)
|-..++.-+-+..|.. +....++.+.+|.. +.+.+.++. +..++.|+.+.-.+-.-...+..+|++++.++... .+
T Consensus 57 ltn~l~~d~~~~~G~~-~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d 135 (389)
T PF05889_consen 57 LTNSLVLDALRLAGLR-SVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGD 135 (389)
T ss_dssp HHHHHHHHHHHHTTHT-THCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETT
T ss_pred HHHHHHHHHHHHcCCc-cccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCC
Confidence 3333444443445644 23456777766554 344444442 24678898888777666667788999999988532 23
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHH
Q 013892 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKK 328 (434)
Q Consensus 249 ~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~ 328 (434)
....|.+.+++.+++. |....+.+++++.---|... +++++|.++|+++|+..|+..||+- ....-...+.+
T Consensus 136 ~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgv---Q~~~~~~~i~~ 207 (389)
T PF05889_consen 136 ELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGV---QSSKCMHLIQQ 207 (389)
T ss_dssp EEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTT---T-HHHHHHHHH
T ss_pred eeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhh---hHHHHHHHHHH
Confidence 3455788999988654 43566777776644344432 4699999999999999999999985 10000001111
Q ss_pred HHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHH
Q 013892 329 VSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDES 407 (434)
Q Consensus 329 ~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~ 407 (434)
..+ .+ -=| +++.|+-|+|- -+.-.+.+. +.++..++.+.+... .-+..+..-..+-...| +..-
T Consensus 208 a~~-~G--Rvd---a~vqS~dkNF~--VPvGgai~A--s~~~~~i~~vs~~YpGRas~sp~ld~~itLl~L-----G~~g 272 (389)
T PF05889_consen 208 AWR-VG--RVD---AFVQSTDKNFM--VPVGGAIMA--SFDPSGILAVSKEYPGRASASPSLDLFITLLSL-----GCTG 272 (389)
T ss_dssp HHH-HS--TCS---EEEEEHHHHHC--EESSHEEEE--ESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHH-----HHHH
T ss_pred HHh-cC--Ccc---eeeeecCCCEE--ecCCCcEEE--ecCHHHHHHHHHHhhhhhhcccchHHHHHHHHH-----hhhH
Confidence 111 11 112 68899999994 566555553 358889988877654 22233333222222222 1234
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 013892 408 YESYCAERDGILSSLARRAK 427 (434)
Q Consensus 408 ~~~~~~~r~~l~~~L~~~~~ 427 (434)
+.....+|......|.++.+
T Consensus 273 ~~~ll~~r~~~f~~l~erl~ 292 (389)
T PF05889_consen 273 YGALLKERKASFPYLKERLK 292 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44444555555555444443
No 381
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=97.77 E-value=0.0011 Score=72.55 Aligned_cols=127 Identities=15% Similarity=0.169 Sum_probs=86.8
Q ss_pred CCCCCCC-----cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh--cCCCCEEEEcCCCChhHHHHH
Q 013892 160 TGAYSHS-----QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI--RSENDGILCPIPQYPLYSASI 232 (434)
Q Consensus 160 ~~~Y~~~-----~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~--~~~gd~Vlv~~p~y~~~~~~~ 232 (434)
...|.|. +|..+..=.....+.+..| .+..+.-+..+++.+...++.+.. ++.+++|++++-.||.+...+
T Consensus 93 ~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtG--m~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~ 170 (939)
T TIGR00461 93 YTAYTPYQPEISQGRLEALLNFQTVVSDLTG--LPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVL 170 (939)
T ss_pred hhcCCCCChhhhhHHHHHHHHHHHHHHHHHC--CChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHH
Confidence 4556664 4554443334444444445 445567778888888776666642 123489999999999887665
Q ss_pred H----HcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 233 A----LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 233 ~----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
+ ..|.+++.++ +++|++.+ ++.++++.+|+. +|.+.+ +++|+++++++|.++++
T Consensus 171 ~t~a~~~g~~v~~~~----------~~~l~~~~--------~~~~v~~q~Pn~-~G~ied---~~~i~~~~h~~gal~~~ 228 (939)
T TIGR00461 171 HTRAKPFGIEVIVVD----------CSDIKKAV--------DVFGCLLQYPAT-DGSILD---YKQLIDALHSHKSLVSV 228 (939)
T ss_pred HHHHHhcCcEEEEEc----------HHHHhhcC--------CEEEEEEECCCC-CeEEec---HHHHHHHHHHcCCEEEE
Confidence 5 6788888763 34444433 366788889977 899864 99999999999999998
Q ss_pred cc
Q 013892 309 DE 310 (434)
Q Consensus 309 De 310 (434)
+.
T Consensus 229 ~a 230 (939)
T TIGR00461 229 AA 230 (939)
T ss_pred Ee
Confidence 54
No 382
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.76 E-value=0.00034 Score=67.09 Aligned_cols=201 Identities=21% Similarity=0.293 Sum_probs=132.1
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc----CCCCEEEEcCCCChh-HHHHHHH
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR----SENDGILCPIPQYPL-YSASIAL 234 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~----~~gd~Vlv~~p~y~~-~~~~~~~ 234 (434)
.-.|+-+.++..|.+++.+.+ | -+.++-|.-+-.|=..+...+++ .||.+..++...|.. ...-.+.
T Consensus 72 DEAYagsrs~~~L~~avkdif----G----fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ 143 (471)
T COG3033 72 DEAYAGSRSYYALADAVKDIF----G----FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQI 143 (471)
T ss_pred chhhcccccHHHHHHHHHHhc----C----ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHh
Confidence 557999999999999999986 4 24566676555555555555552 245455555555554 4445677
Q ss_pred cCCeEEEEecCCCCCC--------CCCHHHHHHHHHHHHhcCCCeeEEEEe-cCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 013892 235 HGGTLVPYYLDEATGW--------GLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLV 305 (434)
Q Consensus 235 ~g~~~~~~~~~~~~~~--------~~d~~~l~~~l~~~~~~g~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~~~~~~~~ 305 (434)
.|+.++-++.++..+. .+|++.|++.|++...+ ++..|+++ ..|.-.|+-.|.+.++++.++|++|++.
T Consensus 144 ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~--nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ip 221 (471)
T COG3033 144 NGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD--NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIP 221 (471)
T ss_pred cCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc--cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCc
Confidence 8998888877654322 46899999999986433 34556665 5566789999999999999999999999
Q ss_pred EEEccC-CCCCccC---CCC--CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH---HHHHHH
Q 013892 306 LLADEV-YQENVYV---PEK--KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA---EVREQI 376 (434)
Q Consensus 306 li~Dea-y~~~~~~---~~~--~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~---~~~~~l 376 (434)
++.|.+ |.++.|- .+. ...++..+.+++- .|.| -+.-|.-|. |+..+ +|++.. . ++ ++-+++
T Consensus 222 vv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~-sYaD---~~~mS~KKD--~lvnm-GGfl~~-~-D~~~fDvy~~~ 292 (471)
T COG3033 222 VVMDAARFAENAYFIKQREPGYRDWSIEEIAREMY-SYAD---GCTMSAKKD--GLVNM-GGFLCF-K-DDSFFDVYEEC 292 (471)
T ss_pred EEeehhhhhhhhhhhhhcCcccccccHHHHHHHHH-hhhh---hheeecccc--ceecc-ccEEEe-c-CccHHHHHHHH
Confidence 999965 3333321 111 3567777777665 3444 234577775 44332 566654 3 44 355555
Q ss_pred HHH
Q 013892 377 YKV 379 (434)
Q Consensus 377 ~~~ 379 (434)
...
T Consensus 293 ~~~ 295 (471)
T COG3033 293 RTL 295 (471)
T ss_pred Hhh
Confidence 443
No 383
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.73 E-value=0.0013 Score=65.01 Aligned_cols=148 Identities=18% Similarity=0.283 Sum_probs=104.7
Q ss_pred CcchHHHHHHHHHHHHhhcCCCC--------CCCCEEEcCChHHHHHHHHHHHh----c-CCC------------CEEEE
Q 013892 166 SQGIKGLRDTIAAGIEARDGFPA--------DPNDIFLTDGASPAVHMMMQLLI----R-SEN------------DGILC 220 (434)
Q Consensus 166 ~~G~~~lr~~ia~~~~~~~g~~~--------~~~~i~~t~G~~~al~~~l~~l~----~-~~g------------d~Vlv 220 (434)
+.-..+|..-+.+|+.+..+.|. +.-.|+.++.+-..+-.++.+-. + +.+ =.++.
T Consensus 108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~ 187 (511)
T KOG0628|consen 108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC 187 (511)
T ss_pred CcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEe
Confidence 34478999999999988766431 22345555544333333332211 0 111 13778
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
.+-.+.+....+...|.++..++.++ +|+++.+.|+++|++-.+.|.-+ .+++.+-+. ||.+ .-+++.+|..+|+
T Consensus 188 SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIP-f~v~at~GT-T~~c-a~D~l~elg~Vc~ 262 (511)
T KOG0628|consen 188 SDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIP-FFVCATLGT-TSSC-AFDELEELGPVCR 262 (511)
T ss_pred cCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCcc-EEEEEeecC-cccc-ccccHHHhcchhh
Confidence 88999999999999999999999876 79999999999999987777433 444445433 2222 3468999999999
Q ss_pred HcCCEEEEccCCCCCccC
Q 013892 301 KEGLVLLADEVYQENVYV 318 (434)
Q Consensus 301 ~~~~~li~Deay~~~~~~ 318 (434)
++|+|+.+|.+|.+-.|.
T Consensus 263 ~~glWLHVDAAYAGsa~i 280 (511)
T KOG0628|consen 263 EEGLWLHVDAAYAGSAFI 280 (511)
T ss_pred hcCEEEEeehhhcccccc
Confidence 999999999999986554
No 384
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=97.68 E-value=0.0016 Score=65.35 Aligned_cols=127 Identities=24% Similarity=0.277 Sum_probs=81.4
Q ss_pred CCCCCC-----CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc--CCCCEEEEcCCCChhHHHHH
Q 013892 160 TGAYSH-----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--SENDGILCPIPQYPLYSASI 232 (434)
Q Consensus 160 ~~~Y~~-----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~--~~gd~Vlv~~p~y~~~~~~~ 232 (434)
...|.| ++|..+..-.....+.+..|+++ -+.-+-.|++.+-..++.+... ..+++|+++.-.|+.+...+
T Consensus 94 ~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdv--aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~ 171 (429)
T PF02347_consen 94 YTAYTPYQPEISQGRLQALFEYQSMICELTGMDV--ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVL 171 (429)
T ss_dssp CCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSE--E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHH
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCc--cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHH
Confidence 445655 55766555555556655556543 2344566777666655444321 23469999999999998866
Q ss_pred HH----cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 233 AL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 233 ~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
+. .|.+++.++.+++. ..| ++ ++.+|++.+|+. .|.+-+ +++|.++++++|.++++
T Consensus 172 ~t~a~~~g~~iv~~~~~~~~--~~d--------~~------~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~ 231 (429)
T PF02347_consen 172 RTYAAPLGIEIVEVPLDEDG--TTD--------DD------DTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV 231 (429)
T ss_dssp HHHCCHCCEEEEEE-BBTTC--SB---------ST------TEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE
T ss_pred HHhhhhCCeEEEEecccccC--Ccc--------cc------CeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE
Confidence 55 58999999987653 223 22 799999999997 888866 99999999999998886
No 385
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.56 E-value=0.00034 Score=69.23 Aligned_cols=139 Identities=16% Similarity=0.153 Sum_probs=109.6
Q ss_pred chHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh---cC----CCCEEEEcCCCChhHHHHHHHcCCeEE
Q 013892 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI---RS----ENDGILCPIPQYPLYSASIALHGGTLV 240 (434)
Q Consensus 168 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~---~~----~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 240 (434)
+..++..++-..+...++-+ ...-=..|.|+++++..+..... .. ....++++.-.+..+...++..+.++.
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~ 195 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELR 195 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEE
Confidence 45667777777777666644 11222578899999655544431 01 124678888888889999999999999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEccCCCCCcc
Q 013892 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK-EGLVLLADEVYQENVY 317 (434)
Q Consensus 241 ~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~-~~~~li~Deay~~~~~ 317 (434)
.+++++ ++|.+|+..+.+.+++ ++.+++..-|+-|+|.. +++++|.+++.+ +++.+.+|.+-++|+-
T Consensus 196 ~V~~~~-~~~~~D~~k~~~~i~e------Nti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~ 263 (491)
T KOG1383|consen 196 EVPLDE-GDYRVDPGKVVRMIDE------NTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFIN 263 (491)
T ss_pred eeeccc-cceEecHHHHHHHhcc------ceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccc
Confidence 999987 5799999999999998 89999999999999987 558999999988 9999999999999766
No 386
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.47 E-value=0.0041 Score=60.18 Aligned_cols=259 Identities=16% Similarity=0.129 Sum_probs=147.9
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHcCCCC--CCCCCCC-CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 127 HPSILDRSETQGLFSADSIERAWQILDQIPGR--ATGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 127 ~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~--~~~~Y~~-~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
.|...+|+.||...|++|++.+.+.+.+.... +...-++ +.-..++.+...+.+.+.+++|-+.+=+++-.|++..+
T Consensus 3 ~~~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf 82 (365)
T COG1932 3 MPRVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQF 82 (365)
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHH
Confidence 35577899999999999999998877664320 1111222 12234555566666666778776666566777889999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHH-HHHHcCC--eEEEEecCCCCCCC--CCHHHHHHHHHHHHhcCCCeeEEEEec
Q 013892 204 HMMMQLLIRSENDGILCPIPQYPLYSA-SIALHGG--TLVPYYLDEATGWG--LETSEVKKQLEAAKAKGITVRALVVIN 278 (434)
Q Consensus 204 ~~~l~~l~~~~gd~Vlv~~p~y~~~~~-~~~~~g~--~~~~~~~~~~~~~~--~d~~~l~~~l~~~~~~g~~~~~i~l~~ 278 (434)
.++...|+ ..+..-++..-.|..... -++..+- .+.... .++.+|+ ++++... +.+ +...|++|.
T Consensus 83 ~~~p~nLl-~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~-~~~~~~~~iP~~~~~~--~~~------~~ayv~~~~ 152 (365)
T COG1932 83 AMAPMNLL-GKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDAR-IEEAGYGSIPDLSKWD--FSD------NDAYVHFCW 152 (365)
T ss_pred HHHHHhhh-cccCceeEeeeehhHhHHHHHHHhcccccccccc-eeccCccCCCChhhcc--cCC------CccEEEEec
Confidence 99998887 333221555566654432 2333443 222222 1222233 3444332 211 222355554
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCc
Q 013892 279 PGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (434)
Q Consensus 279 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~ 358 (434)
=..-+|+-++. ...+. . +.++|+|..-.- +.. ...+.+ -+ ++-.|.-|++ |-.|
T Consensus 153 NeTi~Gv~v~~--~p~~~---~--~~~~v~D~SS~i--lsr---~iDvsk---------~d---viyagaQKnl-GpaG- 206 (365)
T COG1932 153 NETISGVEVPE--LPDIG---S--DGLLVADASSAI--LSR---PIDVSK---------YD---VIYAGAQKNL-GPAG- 206 (365)
T ss_pred CCcccceEccC--CCCCC---C--CceEEEecccHH--hcC---CCChhH---------cc---eEEEehhhcc-Cccc-
Confidence 34456776551 11111 1 277888875433 221 111211 12 5567899999 7678
Q ss_pred eeEEEEEecCCHHHHHHHHHH--------------hhcccCCchHHHHHHHHHcCC---CCCChHHHHHHHHHHHHHHHH
Q 013892 359 RGGYMEVTGFSAEVREQIYKV--------------ASVNLCSNISGQILASLVMSP---PKVGDESYESYCAERDGILSS 421 (434)
Q Consensus 359 R~G~~~~~~~~~~~~~~l~~~--------------~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~ 421 (434)
++.+++ .+++++++... .+++..|+++.-++....++- ..-++.+.++-+++.+.+.+.
T Consensus 207 -ltvvIv---r~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~ 282 (365)
T COG1932 207 -LTVVIV---RPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDW 282 (365)
T ss_pred -eEEEEE---cHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 777777 88888888553 124556777776666555432 223566677777777888777
Q ss_pred HHHH
Q 013892 422 LARR 425 (434)
Q Consensus 422 L~~~ 425 (434)
+++.
T Consensus 283 id~s 286 (365)
T COG1932 283 IDKS 286 (365)
T ss_pred HHhC
Confidence 7664
No 387
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.45 E-value=0.0038 Score=60.15 Aligned_cols=259 Identities=14% Similarity=0.093 Sum_probs=140.1
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCC--cchHHHHHHHHHHHHhh----cCCCCCCC--CEEEcCChHHHHHHHHHHHh
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHS--QGIKGLRDTIAAGIEAR----DGFPADPN--DIFLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~--~G~~~lr~~ia~~~~~~----~g~~~~~~--~i~~t~G~~~al~~~l~~l~ 211 (434)
....|++++-..+.+-. .-+|+-. .|-.++.+.+.-+..+| ++.+-+.. +|---+| +.|...+..+++
T Consensus 52 ts~aVmeAlGS~ltNKY---SEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SG-SPANfavYtall 127 (477)
T KOG2467|consen 52 TSRAVMEALGSCLTNKY---SEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSG-SPANFAVYTALL 127 (477)
T ss_pred hHHHHHHHHhHHhhccc---ccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCC-CchhhHHHhhhc
Confidence 35567777766665532 2233321 23334555554444333 34322222 3333344 466667778888
Q ss_pred cCCCCEEEEcCCCChhH-----HHHHHHcC-----CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCC
Q 013892 212 RSENDGILCPIPQYPLY-----SASIALHG-----GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (434)
Q Consensus 212 ~~~gd~Vlv~~p~y~~~-----~~~~~~~g-----~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~N 281 (434)
.|+++|.-.+.-..++ ..--+... .+-.+|.++++.+ -+|.|.|++..... ++++|+.-
T Consensus 128 -~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG-~IDYD~Le~~A~~f-----rPk~iiaG---- 196 (477)
T KOG2467|consen 128 -KPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG-YIDYDKLEKTATLF-----RPKLIIAG---- 196 (477)
T ss_pred -CCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC-ceehHHHHHHHHhc-----CCcEEEec----
Confidence 7999998555322221 11111111 1223555666544 57999999987776 88887733
Q ss_pred CCccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee
Q 013892 282 PTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (434)
Q Consensus 282 PtG~~~~~~-~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~ 360 (434)
+..+++. +..++.++|.+.|.++++|.+|......... .++.+ ++.| |+..+..|++ -|-|+
T Consensus 197 --~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~v-ipsPF--------ey~D---iVTTTTHKsL---RGPRg 259 (477)
T KOG2467|consen 197 --TSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGV-IPSPF--------EYCD---IVTTTTHKSL---RGPRG 259 (477)
T ss_pred --cccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhccc-CCCcc--------cccc---eeeccccccc---cCCcc
Confidence 2233433 4677777888999999999998654332211 12211 1234 8888999987 59999
Q ss_pred EEEEEecC----C-H-------HHHHHHHHHh--hcccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHH
Q 013892 361 GYMEVTGF----S-A-------EVREQIYKVA--SVNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 361 G~~~~~~~----~-~-------~~~~~l~~~~--~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
|.+..--+ + + ++-+.|...- ....+|....-.+++.+|..- .+..+..++..++.+.+.+.|.+
T Consensus 260 ~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~ 339 (477)
T KOG2467|consen 260 AMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALIS 339 (477)
T ss_pred eeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98753110 0 0 1223332221 123344333333333333321 22345666777888888888887
Q ss_pred HHHHHh
Q 013892 425 RAKANI 430 (434)
Q Consensus 425 ~~~~~~ 430 (434)
+.-+++
T Consensus 340 ~Gy~lv 345 (477)
T KOG2467|consen 340 RGYKLV 345 (477)
T ss_pred cCceEe
Confidence 765544
No 388
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.45 E-value=0.0029 Score=58.28 Aligned_cols=179 Identities=15% Similarity=0.134 Sum_probs=101.1
Q ss_pred hcCCCCCCCCEEEc--CChHHHHHHHHHHHhc-CCC-CEEEEcCCCChhHHHHHHHcCCeEEEEe-cCCCCCCCCCHHHH
Q 013892 183 RDGFPADPNDIFLT--DGASPAVHMMMQLLIR-SEN-DGILCPIPQYPLYSASIALHGGTLVPYY-LDEATGWGLETSEV 257 (434)
Q Consensus 183 ~~g~~~~~~~i~~t--~G~~~al~~~l~~l~~-~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~~~d~~~l 257 (434)
..|...-...+++. +|.+ +.+.+..+.. .|. ..|+-+.-.--.....+-..|.+++.+. ..+.+....|++.+
T Consensus 69 l~glhav~nc~vvpl~tgms--lslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav 146 (432)
T KOG3843|consen 69 LAGLHAVANCFVVPLATGMS--LSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAV 146 (432)
T ss_pred HhhhhhhhceeEEecccccc--HHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHH
Confidence 34655555555433 4443 3344444431 233 3444444333333334445788877764 33334455688888
Q ss_pred HHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCC
Q 013892 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (434)
Q Consensus 258 ~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~ 337 (434)
+..+++. ....|+..+...-+=..-+++.+++|..+|..|++.-|+..+|+- -.. ..+..+..... .
T Consensus 147 ~~~iee~-----g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnaygl--qse----e~i~~iaa~~~--~ 213 (432)
T KOG3843|consen 147 EAIIEEL-----GEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGL--QSE----ECIHKIAAAAE--C 213 (432)
T ss_pred HHHHHHh-----CCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhcccccc--chH----HHHHHHHHHhh--h
Confidence 8888875 455555544433233334567899999999999999999999985 111 11222221111 0
Q ss_pred CCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh
Q 013892 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (434)
Q Consensus 338 ~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 381 (434)
..+. .+++|+-|+|- ..+|-.+..++....++.+.+...
T Consensus 214 grid-a~vqsldknf~----vpvggaiia~fk~n~iq~iak~yp 252 (432)
T KOG3843|consen 214 GRID-AFVQSLDKNFM----VPVGGAIIAAFKDNFIQEIAKMYP 252 (432)
T ss_pred ccHH-HHHHHhhhcce----eecchhHhhHhHHHHHHHHHHhCC
Confidence 1111 46789999993 444444434567788888877643
No 389
>PLN02672 methionine S-methyltransferase
Probab=97.20 E-value=0.01 Score=66.19 Aligned_cols=209 Identities=11% Similarity=0.070 Sum_probs=136.8
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-----CCCCEEEEcCCCChhHHHHHH
Q 013892 159 ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----SENDGILCPIPQYPLYSASIA 233 (434)
Q Consensus 159 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-----~~gd~Vlv~~p~y~~~~~~~~ 233 (434)
...-|.++.|...+|..||.|+...+++++++++|++.+.-..||..+++.+.- +.+-+-.+| .-|...+.
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 493 (1082)
T PLN02672 418 SYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP----KKWLTSLA 493 (1082)
T ss_pred CCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC----HHHHhHhh
Confidence 377899999999999999999999999999999999999999999999988630 222122211 22333333
Q ss_pred HcC--------CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 013892 234 LHG--------GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLV 305 (434)
Q Consensus 234 ~~g--------~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~ 305 (434)
..| ..+..+.-.. . .+.+.+.|++. ++++|+..-.. +-..+...++.|++.+++.|..
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 559 (1082)
T PLN02672 494 IENATSDSKSDDVITVIEAPR----Q--SDLVIELIKKL-----KPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIGAR 559 (1082)
T ss_pred hhcccccCccCCeEEEEeCCC----c--chHHHHHHHhC-----CCeEEEEeccc---hhhhhHHHHHHHHHHHHhhCcE
Confidence 333 2222222111 1 23556666665 78777754222 2234556789999999999999
Q ss_pred EEEccCCCCCccCCCCCccchHHHHhhhCCC-CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cc
Q 013892 306 LLADEVYQENVYVPEKKFHSFKKVSRSMGYG-EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VN 383 (434)
Q Consensus 306 li~Deay~~~~~~~~~~~~s~~~~~~~l~~~-~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~ 383 (434)
++.|+.-..-...... .. .+++.+... .+. ...++.++-|+- -.+.+-+.+++. -++.+.+.+.+... ..
T Consensus 560 ~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 631 (1082)
T PLN02672 560 LFLDISDHLELSSLPG-SN---GVLKYLAGHPLPS-HAAIICGLVKNQ-VYSDLEVAFVIS--ENEAVLKALSKTGEVLE 631 (1082)
T ss_pred EEEehhhheeeccCCC-cc---cHHHHhcCCCCCc-chhHhhhhhhcc-ccccceEEEEec--CcHHHHHHHHHHHHhhc
Confidence 9999864322222211 22 333333321 233 456778888986 568999999965 57778888877665 56
Q ss_pred cCCchHHHHH
Q 013892 384 LCSNISGQIL 393 (434)
Q Consensus 384 ~~~~~~~q~~ 393 (434)
+..+.+.|+-
T Consensus 632 ~~~~~~~~~~ 641 (1082)
T PLN02672 632 GRTAIISQFY 641 (1082)
T ss_pred cchHHHHHHH
Confidence 6677777763
No 390
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=96.96 E-value=0.067 Score=52.96 Aligned_cols=128 Identities=20% Similarity=0.264 Sum_probs=85.1
Q ss_pred CCCCCCCCc-----chH----HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc--CCCCEEEEcCCCChh
Q 013892 159 ATGAYSHSQ-----GIK----GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--SENDGILCPIPQYPL 227 (434)
Q Consensus 159 ~~~~Y~~~~-----G~~----~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~--~~gd~Vlv~~p~y~~ 227 (434)
....|.|.+ |.. ++...++++ -|.++ .+--+-.|+|.+-..++.+... ++.++|+|+.-+|+.
T Consensus 103 wyTaYTPYQpEISQGrLqaLfefQtlv~dL----TGm~V--ANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpq 176 (450)
T COG0403 103 WYTAYTPYQPEISQGRLEALFEFQTLVADL----TGLDV--ANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQ 176 (450)
T ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHH----hCCCc--ccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHH
Confidence 366777754 432 333444444 35443 3444556666666555554421 336899999999999
Q ss_pred HHHHHHHc----CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC
Q 013892 228 YSASIALH----GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (434)
Q Consensus 228 ~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~ 303 (434)
+.+.++.. |.+++.++.+ |++.|+++ ++. ++-++++.+|+. .|.. .+++++|.+.++++|
T Consensus 177 t~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~-~~~-----~~~gv~vQyP~~-~G~~--~~d~~~l~~~~h~~~ 240 (450)
T COG0403 177 TLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA-DDG-----DVFGVLVQYPNT-FGIV--EEDLRALIEAAHSAG 240 (450)
T ss_pred HHHHHHhhcccCceEEEEeccc-------hhhhhhhc-ccc-----CeEEEEEecCCC-CCcc--chhHHHHHHHHhhcC
Confidence 99887763 6777776654 67777776 332 678899999985 6733 346999999999998
Q ss_pred CEEEE
Q 013892 304 LVLLA 308 (434)
Q Consensus 304 ~~li~ 308 (434)
.++++
T Consensus 241 al~~v 245 (450)
T COG0403 241 ALVIV 245 (450)
T ss_pred CEEEE
Confidence 87765
No 391
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=96.51 E-value=0.023 Score=54.74 Aligned_cols=154 Identities=19% Similarity=0.272 Sum_probs=85.7
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHh
Q 013892 253 ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSR 331 (434)
Q Consensus 253 d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~ 331 (434)
.++++++.|..++++...+.+|++.--+...|- --+++.++.|.+++++||+.+|+||+..+..-.+. ++.-..+
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk--~WaHehw-- 329 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGK--FWAHEHW-- 329 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCc--eeeehhc--
Confidence 478888889888777655555555433554443 46788999999999999999999999987554443 3322111
Q ss_pred hhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHH-HHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHH
Q 013892 332 SMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ-IYKVASVNLCSNISGQILASLVMSPPKVGDESYES 410 (434)
Q Consensus 332 ~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 410 (434)
.+. .-+| + -+|||-|- . +||.. +++++-. -++.-.+|.+ -+.-..++..+++.-+ -+.+.+.
T Consensus 330 ~l~-~PpD--~---vTFSKK~q--~---gGffh----~~~frpn~pYrifNTWmG-dP~k~lll~~vv~~I~-~~~Ll~n 392 (484)
T KOG1405|consen 330 NLD-SPPD--V---VTFSKKFQ--T---GGFFH----DEEFRPNEPYRIFNTWMG-DPSKNLLLEEVVQEIK-REDLLNN 392 (484)
T ss_pred CCC-CCcc--c---eehhhhhh--c---Ccccc----CcccCCCchHHHhhhhcC-ChHHHHHHHHHHHHHh-HHHHHHH
Confidence 111 0134 2 38999883 2 36774 4444322 2222223432 2222222333332110 0244555
Q ss_pred HHHHHHHHHHHHHHHHH
Q 013892 411 YCAERDGILSSLARRAK 427 (434)
Q Consensus 411 ~~~~r~~l~~~L~~~~~ 427 (434)
...--+.+...|.++..
T Consensus 393 ~~~vG~~l~~gL~~Lq~ 409 (484)
T KOG1405|consen 393 VAHVGKALLKGLLELQA 409 (484)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55555666666665543
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=95.33 E-value=0.23 Score=51.68 Aligned_cols=142 Identities=22% Similarity=0.311 Sum_probs=101.3
Q ss_pred CCCCCC---CcchHHHHHHHHHHHHhhcCCCCCCCCEEEc--CChH---HHHHHHHHHHhcCCC----CEEEEcCCCChh
Q 013892 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLT--DGAS---PAVHMMMQLLIRSEN----DGILCPIPQYPL 227 (434)
Q Consensus 160 ~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t--~G~~---~al~~~l~~l~~~~g----d~Vlv~~p~y~~ 227 (434)
.+-|.| .+|+.++-+.+.+++-..-| -|.+.+- +|++ .++ .++++.....| ..-++|.-.|..
T Consensus 568 IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG----~D~~s~QPNsGA~GEYaGL-~~IRaY~~~kge~hRnvClIPvSAHGT 642 (1001)
T KOG2040|consen 568 IHPFAPVEQAQGYQQLFTELEKDLCEITG----FDSFSLQPNSGAQGEYAGL-RVIRAYLESKGEGHRNVCLIPVSAHGT 642 (1001)
T ss_pred CCCCCchHHHhhHHHHHHHHHHHhheeec----ccceeecCCCCcccchhhH-HHHHHHHHhccCCcceeEEEeecccCC
Confidence 455665 36888888899888866544 2344443 3332 233 33444432333 346788888888
Q ss_pred HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 307 (434)
-...+..+|.+++++.++..+ .+|..+|+.+.+++.+ +..++.++.|+. -|+. ++.+++++++.++||.-|.
T Consensus 643 NPASA~MagmkvvpV~~~~~G--~id~~dLk~kaekh~~---~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVY 714 (1001)
T KOG2040|consen 643 NPASAAMAGMKVVPVGCDANG--NIDMVDLKAKAEKHKD---NLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVY 714 (1001)
T ss_pred ChhhHHhcCCEEEEeeccCCC--CccHHHHHHHHHHhhh---hhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEE
Confidence 888899999999999998764 7899999998877644 466888888864 3433 3579999999999999999
Q ss_pred EccCCCC
Q 013892 308 ADEVYQE 314 (434)
Q Consensus 308 ~Deay~~ 314 (434)
.|.+-..
T Consensus 715 lDGANMN 721 (1001)
T KOG2040|consen 715 LDGANMN 721 (1001)
T ss_pred ecCCCcc
Confidence 9987643
No 393
>PRK12566 glycine dehydrogenase; Provisional
Probab=94.87 E-value=1.5 Score=48.53 Aligned_cols=124 Identities=17% Similarity=0.129 Sum_probs=74.3
Q ss_pred CCCCCCCc-----chHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh--cCCCCEEEEcCCCChhHHHHH
Q 013892 160 TGAYSHSQ-----GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI--RSENDGILCPIPQYPLYSASI 232 (434)
Q Consensus 160 ~~~Y~~~~-----G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~--~~~gd~Vlv~~p~y~~~~~~~ 232 (434)
...|.|.+ |..+..=.....+...-|.++. +--+-.|++.+-..++.+.. +....+|+|+.-.||.+...+
T Consensus 108 yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~va--NASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~ 185 (954)
T PRK12566 108 YTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLA--NASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVL 185 (954)
T ss_pred hhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhh--hhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHH
Confidence 56677644 5443333333333333464433 33344455544443332221 122578999999999888766
Q ss_pred HH----cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 233 AL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 233 ~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
+. .|.+++. +++++.+.+ ++-++++.+|+. .|.+.+ +++|.++++++|.++|+
T Consensus 186 ~t~~~~~g~~i~~-------------~~~~~~~~~------~~~~v~vq~P~~-~G~i~d---~~~i~~~~h~~gal~~~ 242 (954)
T PRK12566 186 RTRAEGFGFELVV-------------DAVDNLAAH------AVFGALLQYPDT-HGEIRD---LRPLIDQLHGQQALACV 242 (954)
T ss_pred HHhhhcCCcEEEE-------------cchhhcCCC------CEEEEEEECCCC-ceEEcc---HHHHHHHHHHcCCEEEE
Confidence 54 4666664 223333332 677888999986 888844 99999999999987663
No 394
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.15 E-value=7 Score=37.42 Aligned_cols=142 Identities=15% Similarity=0.113 Sum_probs=84.7
Q ss_pred CCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCCh---hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 013892 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (434)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 264 (434)
+..+-+++|.|+...-..+..-|. +.|-++++-+-.=. .+...++..| ++..|.+|-. +.|++.+..+..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa-~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis-----~~eei~~~a~~V 108 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFA-KRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDIS-----DREEIYRLAKKV 108 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHH-HhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCC-----CHHHHHHHHHHH
Confidence 444566777777666666666666 57776655543333 2333444445 7888887743 567776666665
Q ss_pred HhcCCCeeEEEEecC---CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCce
Q 013892 265 KAKGITVRALVVINP---GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341 (434)
Q Consensus 265 ~~~g~~~~~i~l~~p---~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 341 (434)
+++-.++ -|+++|. +.-.....+.+++++..++--- ..+...+.+++.|-+ ..++.
T Consensus 109 k~e~G~V-~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~-------------------~~f~t~kaFLP~M~~-~~~GH 167 (300)
T KOG1201|consen 109 KKEVGDV-DILVNNAGIVTGKKLLDCSDEEIQKTFDVNTI-------------------AHFWTTKAFLPKMLE-NNNGH 167 (300)
T ss_pred HHhcCCc-eEEEeccccccCCCccCCCHHHHHHHHHHhhH-------------------HHHHHHHHHhHHHHh-cCCce
Confidence 5554344 4666766 3334455777888887664321 115555566777763 24557
Q ss_pred EEEEecCCCCCCCCCCc
Q 013892 342 LVSFQSVSKGYYGECGK 358 (434)
Q Consensus 342 ~i~i~S~SK~~~g~~G~ 358 (434)
+|.+.|..=-+ |.+|+
T Consensus 168 IV~IaS~aG~~-g~~gl 183 (300)
T KOG1201|consen 168 IVTIASVAGLF-GPAGL 183 (300)
T ss_pred EEEehhhhccc-CCccc
Confidence 88888876656 66664
No 395
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=91.08 E-value=3.2 Score=39.24 Aligned_cols=260 Identities=13% Similarity=0.035 Sum_probs=139.2
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHcCCCCC--CCCCCC-CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHH
Q 013892 129 SILDRSETQGLFSADSIERAWQILDQIPGRA--TGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHM 205 (434)
Q Consensus 129 ~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~--~~~Y~~-~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~ 205 (434)
..++|+.+|..+|..|+..+.+.+-+...-+ ...-+. +.....+.+.....+.+.+.++-+-+-+++-.|++..+..
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaA 86 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAA 86 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccc
Confidence 3678888888899999999887666543211 111111 1123344455555555556766555556677888888887
Q ss_pred HHHHHhc-CCC---CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCC-CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCC
Q 013892 206 MMQLLIR-SEN---DGILCPIPQYPLYSASIALHGGTLVPYYLDEAT-GWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (434)
Q Consensus 206 ~l~~l~~-~~g---d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~ 280 (434)
+...|+. +.| |.|++-..+--.+..+-+......+..++.+.. +--+|.+.++.. ++.+.+++|.--
T Consensus 87 v~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~--------~da~yvyyCaNE 158 (370)
T KOG2790|consen 87 VPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELN--------PDASYVYYCANE 158 (370)
T ss_pred cchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccC--------CCccEEEEecCc
Confidence 7777762 233 556655444334554444333434444443322 112454444332 145567777322
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee
Q 013892 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (434)
Q Consensus 281 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~ 360 (434)
.--|+-++.-. +-.-+|.+++.|-.--. ... ...+. . .-+++.+.-|++ |.+|+-+
T Consensus 159 TVHGVEf~~~P------~~~~~~~vlVaDmSSnf--lSr---pvDvs-----------k-~gvi~aGAQKN~-G~aG~Tv 214 (370)
T KOG2790|consen 159 TVHGVEFDFIP------VNDPKGAVLVADMSSNF--LSR---PVDVS-----------K-FGVIFAGAQKNV-GPAGVTV 214 (370)
T ss_pred eeeceecCCCC------CCCCCCceEEEecccch--hcC---Cccch-----------h-cceEEecccccc-CccccEE
Confidence 23355443111 11235788888864322 111 11111 1 126788899999 8888755
Q ss_pred EEEEEecCCHHHHHHHHHH-------------hhcccCCchHHHHHHHHHcCCC---CCChHHHHHHHHHHHHHHHHHHH
Q 013892 361 GYMEVTGFSAEVREQIYKV-------------ASVNLCSNISGQILASLVMSPP---KVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 361 G~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
=.+ .++++...... .+.+..+|.++.+++...++.- .-+..+.+.-.+..+.+.+.|.+
T Consensus 215 viv-----r~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~ 289 (370)
T KOG2790|consen 215 VIV-----RKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDN 289 (370)
T ss_pred EEE-----ehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 433 55555433221 2344567777766665555431 22345556666677777777765
Q ss_pred H
Q 013892 425 R 425 (434)
Q Consensus 425 ~ 425 (434)
.
T Consensus 290 s 290 (370)
T KOG2790|consen 290 S 290 (370)
T ss_pred c
Confidence 4
No 396
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=90.20 E-value=4.6 Score=36.84 Aligned_cols=153 Identities=18% Similarity=0.188 Sum_probs=96.3
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEE--------------EcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHH
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGIL--------------CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vl--------------v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 258 (434)
+.+-+|+.+....+..++- .|..|. ...|........++..|..++......+ ..-.+++|.
T Consensus 4 ~aL~SGGKDS~~Al~~a~~--~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~ 79 (223)
T COG2102 4 IALYSGGKDSFYALYLALE--EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK 79 (223)
T ss_pred EEEEecCcHHHHHHHHHHH--cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence 6778899999888888873 443321 1112222233356667888888776542 234688999
Q ss_pred HHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCC
Q 013892 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (434)
Q Consensus 259 ~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~ 338 (434)
++++.. +..+|+ +|.+++..+...+-.+|++-|+.++ ..++--++ . .++..+...
T Consensus 80 ~~l~~l-----~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~-----~PLWg~d~---~---ell~e~~~~-- 134 (223)
T COG2102 80 EALRRL-----KVDGIV-------AGAIASEYQKERVERLCEELGLKVY-----APLWGRDP---E---ELLEEMVEA-- 134 (223)
T ss_pred HHHHhC-----cccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe-----ecccCCCH---H---HHHHHHHHc--
Confidence 999875 566888 9999999999999999999998754 34322221 1 334444322
Q ss_pred CceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh
Q 013892 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (434)
Q Consensus 339 ~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 381 (434)
..+++++ +.||. |+...=+|.-+ +.+.++.+.++..
T Consensus 135 Gf~~~Iv-~Vsa~--gL~~~~lGr~i----~~~~~e~l~~l~~ 170 (223)
T COG2102 135 GFEAIIV-AVSAE--GLDESWLGRRI----DREFLEELKSLNR 170 (223)
T ss_pred CCeEEEE-EEecc--CCChHHhCCcc----CHHHHHHHHHHHH
Confidence 1233433 55663 45444455442 7888888887743
No 397
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=87.65 E-value=8.8 Score=36.80 Aligned_cols=169 Identities=17% Similarity=0.155 Sum_probs=109.1
Q ss_pred Cccccccc-CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcc-------hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 129 SILDRSET-QGLFSADSIERAWQILDQIPGRATGAYSHSQG-------IKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 129 ~~l~~~~~-~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G-------~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
+.+.+..| -..+|..+.+.+.+.++.... ...|+...| ...+..-++... +...++|.+.+.-+
T Consensus 67 ~~iYlcGNSLGLmPK~t~~~~~~eLDkWak--~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~EvavmNsLT 138 (465)
T KOG3846|consen 67 PVIYLCGNSLGLMPKSTRNSINAELDKWAK--CAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAVMNSLT 138 (465)
T ss_pred CeEEEeccccccCchhhHhHHHHHHHHHHh--hhhhcccccccceeecchhhhhhhhhhc------cCCchhhhhHhhhh
Confidence 34556666 445677666667666665432 333444332 334444444443 35678899999999
Q ss_pred HHHHHHHHHHhcCCC---CEEEEcCCCChh----HHHHHHHcCCeE----EEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 201 PAVHMMMQLLIRSEN---DGILCPIPQYPL----YSASIALHGGTL----VPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 201 ~al~~~l~~l~~~~g---d~Vlv~~p~y~~----~~~~~~~~g~~~----~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
-.+..++..|. +|. -+|+.+.-.|+. +...++..|..+ +.+...+.. -.+..+++.+.|+. .|-
T Consensus 139 vNlh~Ll~sFy-KPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGE-etlRteDILd~IEk---ngD 213 (465)
T KOG3846|consen 139 VNLHSLLISFY-KPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGE-ETLRTEDILDTIEK---NGD 213 (465)
T ss_pred hHHHHHHHHhc-CCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccc-cchhHHHHHHHHHh---cCC
Confidence 99999998887 454 468888877664 445567778764 333333221 25667777777765 343
Q ss_pred CeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCC
Q 013892 270 TVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (434)
Q Consensus 270 ~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~ 313 (434)
...+|++.-.+.-||+.++ +.+|-..-+..|++|=.|-++.
T Consensus 214 eiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHA 254 (465)
T KOG3846|consen 214 EIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHA 254 (465)
T ss_pred eEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhh
Confidence 4555555677999999999 7777755556699999998887
No 398
>PRK08265 short chain dehydrogenase; Provisional
Probab=86.46 E-value=14 Score=34.57 Aligned_cols=101 Identities=15% Similarity=0.035 Sum_probs=56.0
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+.++..+.+|-. |.+.+++.++...++..+
T Consensus 7 k~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALV-AAGARVAIVDIDADNGAAVAASLGERARFIATDIT-----DDAAIERAVATVVARFGR 80 (261)
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCC-----CHHHHHHHHHHHHHHhCC
Confidence 345666555544455556666 57878887665433344445555666767766633 677777777765444335
Q ss_pred eeEEEEecC-CCCCccCCCHHHHHHHHH
Q 013892 271 VRALVVINP-GNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p-~NPtG~~~~~~~l~~i~~ 297 (434)
+..++.+-. ..+.+...+.++++++.+
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 81 VDILVNLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred CCEEEECCCCCCCCcCcCCHHHHHHHHh
Confidence 555544321 222333455566655443
No 399
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=84.02 E-value=14 Score=31.61 Aligned_cols=100 Identities=11% Similarity=0.094 Sum_probs=59.6
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCC-EEEEcCCC--ChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 193 IFLTDGASPAVHMMMQLLIRSEND-GILCPIPQ--YPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd-~Vlv~~p~--y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
+++|.|++..-..+.+.|. ..|. .|++.... ....... +...+.++..+++|-. +.+.+++.++...+
T Consensus 3 ~lItGa~~giG~~~a~~l~-~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 76 (167)
T PF00106_consen 3 VLITGASSGIGRALARALA-RRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLS-----DPESIRALIEEVIK 76 (167)
T ss_dssp EEEETTTSHHHHHHHHHHH-HTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETT-----SHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHH-hcCceEEEEeeeccccccccccccccccccccccccccccc-----cccccccccccccc
Confidence 5666666555555666666 3554 55554444 3333333 4456788888887743 78888888888765
Q ss_pred cCCCeeEEEEecCCCCCccC--CCHHHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTGQV--LAEENQRAIVDF 298 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG~~--~~~~~l~~i~~~ 298 (434)
...+...++.+....+.+.. ++.+++++..+.
T Consensus 77 ~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 77 RFGPLDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhhhhcccc
Confidence 55567777766443333332 344566665553
No 400
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=79.91 E-value=23 Score=32.62 Aligned_cols=99 Identities=22% Similarity=0.257 Sum_probs=66.7
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEE----cC---------CCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHH
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILC----PI---------PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKK 259 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv----~~---------p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 259 (434)
+++-+|+.+....+..+.. . -+.+.+ +. +........++..|..++.++.... +.-..++|.+
T Consensus 4 ~~l~SGGKDS~~al~~a~~-~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~--~e~~~e~l~~ 79 (223)
T TIGR00290 4 AALISGGKDSCLALYHALK-E-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT--EEDEVEELKG 79 (223)
T ss_pred EEEecCcHHHHHHHHHHHH-h-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC--ccHHHHHHHH
Confidence 5677999999888888765 3 332221 11 1112233456677988877664322 2334677777
Q ss_pred HHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 260 ~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 307 (434)
.+++. .+..|+ +|.+.+..+...+-++|.+-|+..+
T Consensus 80 ~l~~~-----gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 80 ILHTL-----DVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHHc-----CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 77664 567777 9999999999999999999998654
No 401
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=79.54 E-value=45 Score=30.43 Aligned_cols=161 Identities=18% Similarity=0.181 Sum_probs=90.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHH----HHHHHHhcCC
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVH----MMMQLLIRSE 214 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~----~~l~~l~~~~ 214 (434)
..-++.++.++++....+. ...-+-..|.+.--+.+++. .+... +-.-++++-+.|.+.++. .+...|. .|
T Consensus 38 ~tve~av~~mk~y~~~~~~--avSVGLGaGdp~Q~~~Va~I-a~~~~-P~HVNQvFtgag~sr~~Lg~~~T~vN~Lv-sP 112 (236)
T TIGR03581 38 PTVEEAIEDMKKYQKEIDN--AVSVGLGAGDPNQSAMVADI-SAHTQ-PQHINQVFTGVGTSRALLGQADTVINGLV-SP 112 (236)
T ss_pred CCHHHHHHHHHHHHHhCCC--ceEEecCCCCHHHHHHHHHH-HHHcC-CccccccccchHHHHHHhCCccceEEEee-cC
Confidence 3456677777777666543 12222333555433333333 22222 233456677777776553 2333344 23
Q ss_pred C---CEEEEcCC-CC----------hhHHHHHHHcCC-eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC
Q 013892 215 N---DGILCPIP-QY----------PLYSASIALHGG-TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (434)
Q Consensus 215 g---d~Vlv~~p-~y----------~~~~~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p 279 (434)
. ..|-+..- .- ..-..+++..|+ .+.++|+.-. -.+|++...-+...+.| +++
T Consensus 113 TG~~G~VkISTGp~Ss~~~~~iV~vetAiaml~dmG~~SiKffPM~Gl----~~leE~~avA~aca~~g-----~~l--- 180 (236)
T TIGR03581 113 TGTPGLVNISTGPLSSQGKEAIVPIETAIAMLKDMGGSSVKFFPMGGL----KHLEEYAAVAKACAKHG-----FYL--- 180 (236)
T ss_pred CCccceEEeccCcccccCCCceeeHHHHHHHHHHcCCCeeeEeecCCc----ccHHHHHHHHHHHHHcC-----Ccc---
Confidence 2 23444332 11 123445566665 4677787622 14667766555543333 232
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccC
Q 013892 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (434)
Q Consensus 280 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 318 (434)
-|||-+ +.+.+++|+++|.+.|+--|.=-+|...+-.
T Consensus 181 -EPTGGI-dl~Nf~~I~~i~ldaGv~kviPHIYssiIDk 217 (236)
T TIGR03581 181 -EPTGGI-DLDNFEEIVQIALDAGVEKVIPHVYSSIIDK 217 (236)
T ss_pred -CCCCCc-cHHhHHHHHHHHHHcCCCeeccccceecccc
Confidence 689986 8899999999999999998888888876543
No 402
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=78.61 E-value=44 Score=30.63 Aligned_cols=102 Identities=23% Similarity=0.334 Sum_probs=65.2
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEE---EcCCC----C-------hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHH
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGIL---CPIPQ----Y-------PLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vl---v~~p~----y-------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 258 (434)
+++.+|+.+....+..+. ..|..|. +..+. | ......++..|+....+.++... ....+.|.
T Consensus 1 ~vl~SGGkDS~~al~~a~--~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~--~~~~~~l~ 76 (218)
T TIGR03679 1 AALYSGGKDSNYALYKAL--EEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEK--EKEVEDLK 76 (218)
T ss_pred CeeecCcHHHHHHHHHHH--HcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCC--hHHHHHHH
Confidence 356778888887776665 3565552 21121 1 12345567789888877765211 22455677
Q ss_pred HHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 259 ~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 307 (434)
.++..+.++| ...|+ +|.+.+..+...+-++|.+.|+.++
T Consensus 77 ~~l~~~~~~g--~~~vv-------~G~i~sd~~~~~~e~v~~~~gl~~~ 116 (218)
T TIGR03679 77 GALKELKREG--VEGIV-------TGAIASRYQKSRIERICEELGLKVF 116 (218)
T ss_pred HHHHHHHHcC--CCEEE-------ECCcccHhHHHHHHHHHHhCCCeEE
Confidence 7777766553 55677 8888888777778889988887643
No 403
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=78.33 E-value=49 Score=32.11 Aligned_cols=64 Identities=19% Similarity=0.257 Sum_probs=42.0
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 249 ~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
+..++.++++..++...+.-..... ++.+.+=|-| ++.+...+|+++|++.|..+++|..-..+
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~-VvlsGSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~~L 171 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDI-VVLSGSLPPG--VPPDAYAELIRILRQQGAKVILDTSGEAL 171 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCE-EEEeCCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChHHH
Confidence 3456666666666554332213334 4444445554 46788999999999999999999866554
No 404
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=77.87 E-value=23 Score=32.35 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHHhcCCCCEEE-EcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe
Q 013892 199 ASPAVHMMMQLLIRSENDGIL-CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI 277 (434)
Q Consensus 199 ~~~al~~~l~~l~~~~gd~Vl-v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~ 277 (434)
+..+ ..+++.|. ..+-.|. +..+.-......++..|++++..+++ |.+.|.++++. ...|+++
T Consensus 8 G~~G-~~v~~~L~-~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~g-------~d~v~~~ 71 (233)
T PF05368_consen 8 GNQG-RSVVRALL-SAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALKG-------VDAVFSV 71 (233)
T ss_dssp SHHH-HHHHHHHH-HTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHTT-------CSEEEEE
T ss_pred cHHH-HHHHHHHH-hCCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHcC-------CceEEee
Confidence 3344 34445555 3554333 33443223445567789998865543 78899998874 5566766
Q ss_pred cCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 278 NPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 278 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 307 (434)
.+.+. .-..+....+++.|++.|+-.+
T Consensus 72 ~~~~~---~~~~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 72 TPPSH---PSELEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp SSCSC---CCHHHHHHHHHHHHHHHT-SEE
T ss_pred cCcch---hhhhhhhhhHHHhhhccccceE
Confidence 55332 2234567889999999886444
No 405
>PRK06500 short chain dehydrogenase; Provisional
Probab=76.45 E-value=49 Score=30.19 Aligned_cols=80 Identities=14% Similarity=0.054 Sum_probs=44.8
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+..|.++..+.+|.. |.+.+.+.++...+...++
T Consensus 8 ~vlItGasg~iG~~la~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 8 TALITGGTSGIGLETARQFL-AEGARVAITGRDPASLEAARAELGESALVIRADAG-----DVAAQKALAQALAEAFGRL 81 (249)
T ss_pred EEEEeCCCchHHHHHHHHHH-HCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHHhCCC
Confidence 45565555444455566666 57777776654433344444556777777766532 5666666555443333345
Q ss_pred eEEEEe
Q 013892 272 RALVVI 277 (434)
Q Consensus 272 ~~i~l~ 277 (434)
..++.+
T Consensus 82 d~vi~~ 87 (249)
T PRK06500 82 DAVFIN 87 (249)
T ss_pred CEEEEC
Confidence 555544
No 406
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=75.80 E-value=60 Score=29.46 Aligned_cols=80 Identities=18% Similarity=0.034 Sum_probs=45.6
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+...|. ..|..|.+...............+.++..+++|- .|.+.+++.+++..+...+.
T Consensus 8 ~vlItGa~g~iG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 8 KALVTGASGGIGEEIARLLH-AQGAIVGLHGTRVEKLEALAAELGERVKIFPANL-----SDRDEVKALGQKAEADLEGV 81 (245)
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 45566555444445566666 5787777665554444444444455565666553 26677777776654443356
Q ss_pred eEEEEe
Q 013892 272 RALVVI 277 (434)
Q Consensus 272 ~~i~l~ 277 (434)
.+|+-+
T Consensus 82 d~vi~~ 87 (245)
T PRK12936 82 DILVNN 87 (245)
T ss_pred CEEEEC
Confidence 666655
No 407
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=75.10 E-value=49 Score=30.87 Aligned_cols=134 Identities=19% Similarity=0.216 Sum_probs=81.1
Q ss_pred CEEEcCChHHHHHHH-HHHHhcCCCCEEEEcCCCChhHHHHHHHcC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 192 DIFLTDGASPAVHMM-MQLLIRSENDGILCPIPQYPLYSASIALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 192 ~i~~t~G~~~al~~~-l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
.|++-+|++.+|... .+.|. ..|-+|+...-.-.....+....+ .++....+| -.|.+.+++.++...++-.
T Consensus 7 kv~lITGASSGiG~A~A~~l~-~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~D-----VtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 7 KVALITGASSGIGEATARALA-EAGAKVVLAARREERLEALADEIGAGAALALALD-----VTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred cEEEEecCcchHHHHHHHHHH-HCCCeEEEEeccHHHHHHHHHhhccCceEEEeec-----cCCHHHHHHHHHHHHHhhC
Confidence 577778888887655 45565 688888888877777788887788 466666665 3477888888876655544
Q ss_pred CeeEEEEecCCCCCccC---CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 270 TVRALVVINPGNPTGQV---LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 270 ~~~~i~l~~p~NPtG~~---~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
+..+++ +|.+=--|.- ...++|+..++.--+ |+ +.-...+++.|.+.. .+.+|.++
T Consensus 81 ~iDiLv-NNAGl~~g~~~~~~~~~dw~~Mid~Ni~-G~------------------l~~~~avLP~m~~r~-~G~IiN~~ 139 (246)
T COG4221 81 RIDILV-NNAGLALGDPLDEADLDDWDRMIDTNVK-GL------------------LNGTRAVLPGMVERK-SGHIINLG 139 (246)
T ss_pred cccEEE-ecCCCCcCChhhhCCHHHHHHHHHHHHH-HH------------------HHHHHHhhhHHHhcC-CceEEEec
Confidence 566544 5543323332 344567666654321 11 222234555554332 23577777
Q ss_pred cCCCCC
Q 013892 347 SVSKGY 352 (434)
Q Consensus 347 S~SK~~ 352 (434)
|..=.+
T Consensus 140 SiAG~~ 145 (246)
T COG4221 140 SIAGRY 145 (246)
T ss_pred cccccc
Confidence 776544
No 408
>PRK05872 short chain dehydrogenase; Provisional
Probab=74.51 E-value=57 Score=31.09 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=54.7
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
...+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+ .++..+.+|- -|.+.+++.++...++
T Consensus 9 gk~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLH-ARGAKLALVDLEEAELAALAAELGGDDRVLTVVADV-----TDLAAMQAAAEEAVER 82 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 3456666665554455555666 578888877655444444444443 4555555552 3677888777765444
Q ss_pred CCCeeEEEEecCCCCCcc--CCCHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTGQ--VLAEENQRAIV 296 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~ 296 (434)
..+...++.+-.....+. ..+.+++++..
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~ 113 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVI 113 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHH
Confidence 335655554422221121 24556665543
No 409
>PRK06194 hypothetical protein; Provisional
Probab=74.43 E-value=65 Score=30.28 Aligned_cols=80 Identities=15% Similarity=0.040 Sum_probs=45.1
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH---HcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+.+.|. ..|..|++.+-.-........ ..|.++..+..|- -|.+.+++.++...++.
T Consensus 8 ~vlVtGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 8 VAVITGAASGFGLAFARIGA-ALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDV-----SDAAQVEALADAALERF 81 (287)
T ss_pred EEEEeCCccHHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 46666655444445555666 578787776643333333322 2366777777663 36777877777654443
Q ss_pred CCeeEEEEe
Q 013892 269 ITVRALVVI 277 (434)
Q Consensus 269 ~~~~~i~l~ 277 (434)
.+...|+-+
T Consensus 82 g~id~vi~~ 90 (287)
T PRK06194 82 GAVHLLFNN 90 (287)
T ss_pred CCCCEEEEC
Confidence 345555544
No 410
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=74.39 E-value=65 Score=28.90 Aligned_cols=102 Identities=22% Similarity=0.304 Sum_probs=67.1
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEE---EcCCCC-----------hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHH
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGIL---CPIPQY-----------PLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vl---v~~p~y-----------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 258 (434)
++.-+|+.+...++..+.- .|..|. +..|.. ......++..|+..+.+..+.+. .--.+.|.
T Consensus 3 ~v~~SGGkDS~~al~~a~~--~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~--e~~~~~l~ 78 (194)
T cd01994 3 VALISGGKDSCYALYRALE--EGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISGEE--EDEVEDLK 78 (194)
T ss_pred EEEecCCHHHHHHHHHHHH--cCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCCCc--hHHHHHHH
Confidence 4567888888887776653 454432 221211 12344567789888877764321 11246677
Q ss_pred HHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 259 ~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 307 (434)
+.+++..++ ....|+ +|.+.+..+...+-++|.+.|+..+
T Consensus 79 ~~l~~~~~~--g~~~vv-------~G~i~sd~~~~~~e~~~~~~gl~~~ 118 (194)
T cd01994 79 ELLRKLKEE--GVDAVV-------FGAILSEYQRTRVERVCERLGLEPL 118 (194)
T ss_pred HHHHHHHHc--CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEE
Confidence 777776544 355677 9999999999999999999998654
No 411
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=73.99 E-value=7.3 Score=37.73 Aligned_cols=71 Identities=17% Similarity=0.350 Sum_probs=49.9
Q ss_pred HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 307 (434)
+.+.+...+.++..+.+.++.+|.+....+.+.-+. |.. .++ .+.|..++++++++|++.|+++|+-||
T Consensus 21 ~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~----g~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 21 TIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEK----GGQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhh----ccc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 445566678899988888877888876655543322 101 112 234568999999999999999999877
Q ss_pred Ec
Q 013892 308 AD 309 (434)
Q Consensus 308 ~D 309 (434)
-.
T Consensus 90 PE 91 (303)
T cd02742 90 PE 91 (303)
T ss_pred Ee
Confidence 53
No 412
>PRK08589 short chain dehydrogenase; Validated
Probab=73.19 E-value=74 Score=29.78 Aligned_cols=97 Identities=16% Similarity=0.101 Sum_probs=51.4
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH---HcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+.+.|. ..|..|++.... ........ ..+.++..+.+|-. |.+.+++.++...++.
T Consensus 8 ~vlItGas~gIG~aia~~l~-~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 8 VAVITGASTGIGQASAIALA-QEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDIS-----DEQQVKDFASEIKEQF 80 (272)
T ss_pred EEEEECCCchHHHHHHHHHH-HCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecC-----CHHHHHHHHHHHHHHc
Confidence 45555555444445555666 578888877655 44333332 33556666666533 5677777776654443
Q ss_pred CCeeEEEEecCCC-CCcc--CCCHHHHHHH
Q 013892 269 ITVRALVVINPGN-PTGQ--VLAEENQRAI 295 (434)
Q Consensus 269 ~~~~~i~l~~p~N-PtG~--~~~~~~l~~i 295 (434)
.+...++.+-... +.+. ..+.++++++
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~ 110 (272)
T PRK08589 81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKI 110 (272)
T ss_pred CCcCEEEECCCCCCCCCCcccCCHHHHHHH
Confidence 3455444432221 2222 3455666543
No 413
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=72.97 E-value=45 Score=30.70 Aligned_cols=99 Identities=20% Similarity=0.261 Sum_probs=63.6
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEE-------------EcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHH
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGIL-------------CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKK 259 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vl-------------v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 259 (434)
+++.+|+.+....+..++. . .+.+. ...+........++..|..++.+..... +.-.+++|.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~-~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~--~e~~~~~l~~ 79 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALE-E-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE--EEKEVEDLAG 79 (222)
T ss_pred EEEecCcHHHHHHHHHHHH-c-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc--hhHHHHHHHH
Confidence 4567888888887777664 2 33221 1122223344567778988877765421 1223445555
Q ss_pred HHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 260 ~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 307 (434)
.+++. .+..|+ +|.+.+..+...+-++|.+-|+..+
T Consensus 80 ~l~~~-----gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 80 QLGEL-----DVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHHHc-----CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 55432 466777 9999999999999999999998654
No 414
>PRK07063 short chain dehydrogenase; Provisional
Probab=72.90 E-value=75 Score=29.32 Aligned_cols=100 Identities=15% Similarity=0.085 Sum_probs=51.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH-----cCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL-----HGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~-----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-......... .+.++..+.+|-. |.+.+++.++...
T Consensus 8 k~vlVtGas~gIG~~~a~~l~-~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~ 81 (260)
T PRK07063 8 KVALVTGAAQGIGAAIARAFA-REGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT-----DAASVAAAVAAAE 81 (260)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCC-----CHHHHHHHHHHHH
Confidence 456666655544455566666 5787777765443333333222 3456666666533 5666777666544
Q ss_pred hcCCCeeEEEEecCCCCCc--cCCCHHHHHHHH
Q 013892 266 AKGITVRALVVINPGNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~ 296 (434)
++..+...++-+-...+.+ ...+.+++++..
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~ 114 (260)
T PRK07063 82 EAFGPLDVLVNNAGINVFADPLAMTDEDWRRCF 114 (260)
T ss_pred HHhCCCcEEEECCCcCCCCChhhCCHHHHHHHH
Confidence 3333555555442211111 234556665543
No 415
>PRK05876 short chain dehydrogenase; Provisional
Probab=72.77 E-value=72 Score=30.04 Aligned_cols=82 Identities=15% Similarity=0.018 Sum_probs=47.0
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH---HHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+...|. ..|..|++..-.-....... +..|.++..+.+|-. |.+.+++.++...++
T Consensus 7 k~vlVTGas~gIG~ala~~La-~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 80 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFA-RRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR-----HREEVTHLADEAFRL 80 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHHHHHHHHHH
Confidence 346666665555555566666 57877776654333333332 234667777776633 677888877765444
Q ss_pred CCCeeEEEEecC
Q 013892 268 GITVRALVVINP 279 (434)
Q Consensus 268 g~~~~~i~l~~p 279 (434)
..++..++ +|.
T Consensus 81 ~g~id~li-~nA 91 (275)
T PRK05876 81 LGHVDVVF-SNA 91 (275)
T ss_pred cCCCCEEE-ECC
Confidence 33555544 444
No 416
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=72.76 E-value=63 Score=29.82 Aligned_cols=79 Identities=13% Similarity=0.008 Sum_probs=44.5
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC-hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
.+++|.|+...-..+.+.|. ..|-.|++....- ......++..|.++..+.+|- -|.+.+++.++...++..+
T Consensus 10 ~~lItGas~gIG~aia~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 10 VAIITGCNTGLGQGMAIGLA-KAGADIVGVGVAEAPETQAQVEALGRKFHFITADL-----IQQKDIDSIVSQAVEVMGH 83 (251)
T ss_pred EEEEeCCCchHHHHHHHHHH-HCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCC-----CCHHHHHHHHHHHHHHcCC
Confidence 45555555544455556666 6888887654321 112223344566777776663 3677787777765444335
Q ss_pred eeEEEE
Q 013892 271 VRALVV 276 (434)
Q Consensus 271 ~~~i~l 276 (434)
...++.
T Consensus 84 iD~lv~ 89 (251)
T PRK12481 84 IDILIN 89 (251)
T ss_pred CCEEEE
Confidence 655543
No 417
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=72.71 E-value=93 Score=29.93 Aligned_cols=105 Identities=12% Similarity=0.138 Sum_probs=66.0
Q ss_pred CCCCEEEcCChHHHHHHHHHHHhcCCCC--EEEEcC--CCChhHHHH--HHHcCCeEEEEecCCCCCCCCCHHHHHHHHH
Q 013892 189 DPNDIFLTDGASPAVHMMMQLLIRSEND--GILCPI--PQYPLYSAS--IALHGGTLVPYYLDEATGWGLETSEVKKQLE 262 (434)
Q Consensus 189 ~~~~i~~t~G~~~al~~~l~~l~~~~gd--~Vlv~~--p~y~~~~~~--~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 262 (434)
...+|++|.|.+..+..++.... +.|. .|+|.+ |.+.++..+ +...|++...++ | .++-..+.
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~-kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~Ms 229 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAA-KKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMS 229 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHH-hccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhh
Confidence 34689999999999999888876 3433 466654 555544333 234577766654 1 23444444
Q ss_pred HHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 013892 263 AAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 310 (434)
+ -.|+|+-++.--+-|.+....-...++..|++|-+.+++=.
T Consensus 230 r------VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlA 271 (353)
T KOG1465|consen 230 R------VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLA 271 (353)
T ss_pred h------cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEec
Confidence 4 34555555665555666666666777888888887776543
No 418
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=72.64 E-value=74 Score=32.25 Aligned_cols=90 Identities=13% Similarity=0.166 Sum_probs=58.6
Q ss_pred CChHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE
Q 013892 197 DGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV 275 (434)
Q Consensus 197 ~G~~~al~~~l~~l~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~ 275 (434)
-|+.+...+++..|. ..| ..|++.+-++..-...++.+|++++ .++++...+.+ ..+|+
T Consensus 184 IGAGem~~lva~~L~-~~g~~~i~IaNRT~erA~~La~~~~~~~~------------~l~el~~~l~~-------~DvVi 243 (414)
T COG0373 184 IGAGEMGELVAKHLA-EKGVKKITIANRTLERAEELAKKLGAEAV------------ALEELLEALAE-------ADVVI 243 (414)
T ss_pred EcccHHHHHHHHHHH-hCCCCEEEEEcCCHHHHHHHHHHhCCeee------------cHHHHHHhhhh-------CCEEE
Confidence 344455666777777 456 8999999999999999999995544 35667777765 44455
Q ss_pred EecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccC
Q 013892 276 VINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEV 311 (434)
Q Consensus 276 l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Dea 311 (434)
.+. +-|+ .+++.+.+++..+. ++. ++|+|-+
T Consensus 244 ssT-sa~~-~ii~~~~ve~a~~~--r~~-~livDia 274 (414)
T COG0373 244 SST-SAPH-PIITREMVERALKI--RKR-LLIVDIA 274 (414)
T ss_pred Eec-CCCc-cccCHHHHHHHHhc--ccC-eEEEEec
Confidence 441 1211 35676666665542 223 8899963
No 419
>PRK07024 short chain dehydrogenase; Provisional
Probab=72.28 E-value=69 Score=29.59 Aligned_cols=80 Identities=10% Similarity=0.009 Sum_probs=44.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
.+++|.|+...-..+...|. ..|..|++..-.........+... .++..+.+|-. |.+.+.+.++...++..
T Consensus 4 ~vlItGas~gIG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 4 KVFITGASSGIGQALAREYA-RQGATLGLVARRTDALQAFAARLPKAARVSVYAADVR-----DADALAAAAADFIAAHG 77 (257)
T ss_pred EEEEEcCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCC-----CHHHHHHHHHHHHHhCC
Confidence 46666665544455555566 578888877654443333333221 15666666532 67778777776544433
Q ss_pred CeeEEEEe
Q 013892 270 TVRALVVI 277 (434)
Q Consensus 270 ~~~~i~l~ 277 (434)
.+..++.+
T Consensus 78 ~id~lv~~ 85 (257)
T PRK07024 78 LPDVVIAN 85 (257)
T ss_pred CCCEEEEC
Confidence 45554433
No 420
>PRK05867 short chain dehydrogenase; Provisional
Probab=72.11 E-value=81 Score=28.99 Aligned_cols=81 Identities=12% Similarity=0.125 Sum_probs=45.0
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH---HHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+...|. ..|.+|++..-.-....... +..|.++..+.+|- .|.+.+++.++...+.
T Consensus 10 k~vlVtGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYV-EAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDV-----SQHQQVTSMLDQVTAE 83 (253)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 345666555544455555666 57888877654433333332 33456666666653 3677777777654433
Q ss_pred CCCeeEEEEe
Q 013892 268 GITVRALVVI 277 (434)
Q Consensus 268 g~~~~~i~l~ 277 (434)
..+...++.+
T Consensus 84 ~g~id~lv~~ 93 (253)
T PRK05867 84 LGGIDIAVCN 93 (253)
T ss_pred hCCCCEEEEC
Confidence 2256655544
No 421
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=72.09 E-value=67 Score=29.62 Aligned_cols=80 Identities=14% Similarity=0.042 Sum_probs=48.4
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|.+|++....-..........+..+..+.+|- .|.+.+++.++...++..++
T Consensus 8 ~vlItGas~~iG~~ia~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 8 VALLTGAASGIGEAVAERYL-AEGARVVIADIKPARARLAALEIGPAAIAVSLDV-----TRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred EEEEeCCCchHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 46666655554455556666 5788888777665555454444455566666653 36777777777654443356
Q ss_pred eEEEEe
Q 013892 272 RALVVI 277 (434)
Q Consensus 272 ~~i~l~ 277 (434)
..++.+
T Consensus 82 d~li~~ 87 (257)
T PRK07067 82 DILFNN 87 (257)
T ss_pred CEEEEC
Confidence 666544
No 422
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=71.87 E-value=6.6 Score=38.55 Aligned_cols=72 Identities=21% Similarity=0.376 Sum_probs=50.2
Q ss_pred HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 307 (434)
+.+.+...+.++..+.+.++.+|.+.+..+.+.-.. |.. .....+.|..++.+++++|++.|+++|+-||
T Consensus 23 ~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~----ga~------~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 23 YIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEI----GGS------TEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred HHHHHHHhCCcEEEEEeecCCcceeeecCccccccc----ccc------cccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 445566678888888888877888776655432111 100 1223456778999999999999999999887
Q ss_pred Ec
Q 013892 308 AD 309 (434)
Q Consensus 308 ~D 309 (434)
-.
T Consensus 93 PE 94 (329)
T cd06568 93 PE 94 (329)
T ss_pred Ee
Confidence 53
No 423
>PRK08862 short chain dehydrogenase; Provisional
Probab=71.66 E-value=59 Score=29.72 Aligned_cols=81 Identities=9% Similarity=0.058 Sum_probs=46.0
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc-
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK- 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~- 267 (434)
.+++|.|+...-..+...|. ..|..|++..-.-...... ++..|.++..+.+|.. |.+.+++.++...++
T Consensus 7 ~~lVtGas~GIG~aia~~la-~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 7 IILITSAGSVLGRTISCHFA-RLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDF-----SQESIRHLFDAIEQQF 80 (227)
T ss_pred EEEEECCccHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCC-----CHHHHHHHHHHHHHHh
Confidence 45555555444444555566 6888888866544433332 3334667777776633 677888777765444
Q ss_pred CCCeeEEEEecC
Q 013892 268 GITVRALVVINP 279 (434)
Q Consensus 268 g~~~~~i~l~~p 279 (434)
|.+... +++|.
T Consensus 81 g~~iD~-li~na 91 (227)
T PRK08862 81 NRAPDV-LVNNW 91 (227)
T ss_pred CCCCCE-EEECC
Confidence 214554 44444
No 424
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=71.62 E-value=74 Score=28.97 Aligned_cols=83 Identities=16% Similarity=0.064 Sum_probs=46.3
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......... +.++..+.+| -.|.+.+.+.++...++.
T Consensus 6 ~~vlItGasg~iG~~l~~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 6 KVAIVTGASSGIGEGIARRFA-AEGARVVVTDRNEEAAERVAAEILAGGRAIAVAAD-----VSDEADVEAAVAAALERF 79 (251)
T ss_pred cEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECC-----CCCHHHHHHHHHHHHHHh
Confidence 356666555444444556666 56777776654433333333322 3556666665 337788888777654443
Q ss_pred CCeeEEEEecC
Q 013892 269 ITVRALVVINP 279 (434)
Q Consensus 269 ~~~~~i~l~~p 279 (434)
.++.+|+.+..
T Consensus 80 ~~~d~vi~~ag 90 (251)
T PRK07231 80 GSVDILVNNAG 90 (251)
T ss_pred CCCCEEEECCC
Confidence 45666665543
No 425
>PRK06139 short chain dehydrogenase; Provisional
Probab=70.98 E-value=73 Score=31.13 Aligned_cols=102 Identities=12% Similarity=0.078 Sum_probs=53.1
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.++...-..+.+.|. ..|.+|++..-.-..... .++..|.++..+.+|-. |.+.+++.++...+.
T Consensus 8 k~vlITGAs~GIG~aia~~la-~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFA-RRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVT-----DADQVKALATQAASF 81 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHHHHHHh
Confidence 345555444433344455565 578787776544333322 33345777777766633 677888877765554
Q ss_pred CCCeeEEEEecCCCCCcc--CCCHHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTGQ--VLAEENQRAIVDF 298 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 298 (434)
..+...+|.+-.....|. ..+.++++++.+.
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~v 114 (330)
T PRK06139 82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQT 114 (330)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 335655544322222222 2344555555443
No 426
>PRK07478 short chain dehydrogenase; Provisional
Probab=70.81 E-value=87 Score=28.78 Aligned_cols=80 Identities=14% Similarity=0.042 Sum_probs=45.0
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+.+.|. ..|.+|++..-.-...... ++..|.++..+++|-. |.+.+++.+++..++.
T Consensus 8 ~~lItGas~giG~~ia~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 8 VAIITGASSGIGRAAAKLFA-REGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVR-----DEAYAKALVALAVERF 81 (254)
T ss_pred EEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHhc
Confidence 45566554443444555666 5787877765433333222 3334666777776633 6777887777654443
Q ss_pred CCeeEEEEe
Q 013892 269 ITVRALVVI 277 (434)
Q Consensus 269 ~~~~~i~l~ 277 (434)
.+...++.+
T Consensus 82 ~~id~li~~ 90 (254)
T PRK07478 82 GGLDIAFNN 90 (254)
T ss_pred CCCCEEEEC
Confidence 356655544
No 427
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=70.34 E-value=50 Score=25.81 Aligned_cols=71 Identities=15% Similarity=0.232 Sum_probs=46.3
Q ss_pred CCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc
Q 013892 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (434)
Q Consensus 223 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~ 302 (434)
.....|...++..|++.+.+ ..++++.-....|+..+.. +.+|++. |+. .+-+-...+-+.|+++
T Consensus 10 ~~~~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~~-------aD~VIv~-----t~~-vsH~~~~~vk~~akk~ 74 (97)
T PF10087_consen 10 DRERRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIKK-------ADLVIVF-----TDY-VSHNAMWKVKKAAKKY 74 (97)
T ss_pred ccHHHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcCC-------CCEEEEE-----eCC-cChHHHHHHHHHHHHc
Confidence 34567888999999999988 2222223333447776653 4566554 222 2445678899999999
Q ss_pred CCEEEE
Q 013892 303 GLVLLA 308 (434)
Q Consensus 303 ~~~li~ 308 (434)
|+.++.
T Consensus 75 ~ip~~~ 80 (97)
T PF10087_consen 75 GIPIIY 80 (97)
T ss_pred CCcEEE
Confidence 987664
No 428
>PRK06114 short chain dehydrogenase; Provisional
Probab=69.38 E-value=94 Score=28.62 Aligned_cols=81 Identities=11% Similarity=0.014 Sum_probs=44.8
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC-hhHH---HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y-~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+.+.|. ..|..|++....- .... ..++..|.++..+.+|- -|.+.+++.++...+
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~-~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLA-QAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADV-----TSKADLRAAVARTEA 82 (254)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 345666555544455555666 5787777654321 1222 23334466676676653 267777777776544
Q ss_pred cCCCeeEEEEe
Q 013892 267 KGITVRALVVI 277 (434)
Q Consensus 267 ~g~~~~~i~l~ 277 (434)
+..+...++.+
T Consensus 83 ~~g~id~li~~ 93 (254)
T PRK06114 83 ELGALTLAVNA 93 (254)
T ss_pred HcCCCCEEEEC
Confidence 43355655543
No 429
>PRK06483 dihydromonapterin reductase; Provisional
Probab=69.24 E-value=85 Score=28.44 Aligned_cols=97 Identities=8% Similarity=0.029 Sum_probs=48.5
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++....-......++..|+.. +.+|- .|.+.+++.++...+.-.+.
T Consensus 4 ~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~D~-----~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLL-AQGQPVIVSYRTHYPAIDGLRQAGAQC--IQADF-----STNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred eEEEECCCChHHHHHHHHHH-HCCCeEEEEeCCchhHHHHHHHcCCEE--EEcCC-----CCHHHHHHHHHHHHhhCCCc
Confidence 45666655544455555666 578777766543333334444456444 44442 25677777776654432245
Q ss_pred eEEEEecCCCCCc--cCCCHHHHHHHH
Q 013892 272 RALVVINPGNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 272 ~~i~l~~p~NPtG--~~~~~~~l~~i~ 296 (434)
..++.+-.....+ ...+.+++++..
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~ 102 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMM 102 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHH
Confidence 5544332111111 123456666554
No 430
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=68.95 E-value=85 Score=28.95 Aligned_cols=81 Identities=14% Similarity=0.027 Sum_probs=45.9
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCCh--hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP--LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-. .....+...+.++..+.+|-. |.+.+++.+++..+..
T Consensus 16 k~vlItGas~gIG~~ia~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 16 KVAIVTGGNTGLGQGYAVALA-KAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLT-----KPESAEKVVKEALEEF 89 (258)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHHHHc
Confidence 456666655554555566666 57877766544311 122233444666666766633 5777777776654443
Q ss_pred CCeeEEEEe
Q 013892 269 ITVRALVVI 277 (434)
Q Consensus 269 ~~~~~i~l~ 277 (434)
.+...++.+
T Consensus 90 g~id~li~~ 98 (258)
T PRK06935 90 GKIDILVNN 98 (258)
T ss_pred CCCCEEEEC
Confidence 356666544
No 431
>PRK08339 short chain dehydrogenase; Provisional
Probab=68.88 E-value=94 Score=28.94 Aligned_cols=96 Identities=10% Similarity=0.108 Sum_probs=48.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|.+|++..-.-......... .+.++..+..|-. |.+.+++.++...+-
T Consensus 10 ~~lItGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~i~~~~~~~~~~ 83 (263)
T PRK08339 10 LAFTTASSKGIGFGVARVLA-RAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLT-----KREDLERTVKELKNI 83 (263)
T ss_pred EEEEeCCCCcHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC-----CHHHHHHHHHHHHhh
Confidence 35555554444444555666 5788887765443333322222 2556666666533 566777766654322
Q ss_pred CCCeeEEEEecCCCCC-c--cCCCHHHHHHH
Q 013892 268 GITVRALVVINPGNPT-G--QVLAEENQRAI 295 (434)
Q Consensus 268 g~~~~~i~l~~p~NPt-G--~~~~~~~l~~i 295 (434)
| +...++ +|..-+. + ..++.++|++.
T Consensus 84 g-~iD~lv-~nag~~~~~~~~~~~~~~~~~~ 112 (263)
T PRK08339 84 G-EPDIFF-FSTGGPKPGYFMEMSMEDWEGA 112 (263)
T ss_pred C-CCcEEE-ECCCCCCCCCcccCCHHHHHHH
Confidence 3 455444 4442211 1 12455666553
No 432
>PRK05717 oxidoreductase; Validated
Probab=68.79 E-value=76 Score=29.21 Aligned_cols=80 Identities=15% Similarity=-0.013 Sum_probs=45.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|.+|++............+..+.++..+.+|- -|.+.+.+.++...++-.++
T Consensus 12 ~vlItG~sg~IG~~~a~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 12 VALVTGAARGIGLGIAAWLI-AEGWQVVLADLDRERGSKVAKALGENAWFIAMDV-----ADEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred EEEEeCCcchHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHHHHHHHHhCCC
Confidence 45666555444455566666 5777887765444333444444555666666653 26677777666654433345
Q ss_pred eEEEEe
Q 013892 272 RALVVI 277 (434)
Q Consensus 272 ~~i~l~ 277 (434)
..++-+
T Consensus 86 d~li~~ 91 (255)
T PRK05717 86 DALVCN 91 (255)
T ss_pred CEEEEC
Confidence 555544
No 433
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=68.77 E-value=89 Score=28.57 Aligned_cols=96 Identities=19% Similarity=0.154 Sum_probs=51.5
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHH---HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
+++|.|+...-..+.+.|. ..|-.|++..-.-.... ..+...|.++..+.+|- -|.+.+.+.++...++..
T Consensus 3 ~lItG~sg~iG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 3 ALVTGGAQGIGKGIAERLA-KDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDV-----SDKDQVFSAIDQAAEKFG 76 (254)
T ss_pred EEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 4555555444444555566 57777765543322222 22333466677776663 367888887776655444
Q ss_pred CeeEEEEecCCCCCcc--CCCHHHHHH
Q 013892 270 TVRALVVINPGNPTGQ--VLAEENQRA 294 (434)
Q Consensus 270 ~~~~i~l~~p~NPtG~--~~~~~~l~~ 294 (434)
++..++.+....+.+. ..+.+++++
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~ 103 (254)
T TIGR02415 77 GFDVMVNNAGVAPITPILEITEEELKK 103 (254)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHH
Confidence 5667766644444433 234444443
No 434
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=68.67 E-value=94 Score=28.34 Aligned_cols=82 Identities=11% Similarity=0.022 Sum_probs=46.6
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC-hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
...+++|.|+...-..+.+.|. +.|-.|++....- ......+...+.++..+.+|-. +.+.+++.++...+..
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~-~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLA-EAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLS-----DIEAIKALVDSAVEEF 78 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 3456777665554455566666 5787777655432 1222333445666677776633 6777877776654443
Q ss_pred CCeeEEEEe
Q 013892 269 ITVRALVVI 277 (434)
Q Consensus 269 ~~~~~i~l~ 277 (434)
.++..++.+
T Consensus 79 ~~~d~li~~ 87 (248)
T TIGR01832 79 GHIDILVNN 87 (248)
T ss_pred CCCCEEEEC
Confidence 356655543
No 435
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=68.58 E-value=97 Score=28.46 Aligned_cols=81 Identities=14% Similarity=0.069 Sum_probs=47.2
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|-+|++..-.-..... .++..|.++..+..|- .|.+.+++.++...++
T Consensus 11 k~vlItGa~g~iG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 11 RRALVTGSSQGIGYALAEGLA-QAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDV-----TDHDAVRAAIDAFEAE 84 (255)
T ss_pred CEEEEECCcchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccC-----CCHHHHHHHHHHHHHh
Confidence 456666665544455556666 578788876544332222 2334466777777663 3677788777765444
Q ss_pred CCCeeEEEEe
Q 013892 268 GITVRALVVI 277 (434)
Q Consensus 268 g~~~~~i~l~ 277 (434)
..+...++.+
T Consensus 85 ~~~~d~li~~ 94 (255)
T PRK07523 85 IGPIDILVNN 94 (255)
T ss_pred cCCCCEEEEC
Confidence 3356665544
No 436
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=68.01 E-value=9 Score=37.92 Aligned_cols=67 Identities=13% Similarity=0.342 Sum_probs=48.8
Q ss_pred HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 307 (434)
+.+.+..+..++..+.+.++.+|.+.+..+.+.-+. | ....|..++++++++|++.|+++|+-||
T Consensus 23 ~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~----g-----------a~~~~~~YT~~di~eiv~yA~~rgI~vI 87 (348)
T cd06562 23 TIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKK----G-----------AYSPSEVYTPEDVKEIVEYARLRGIRVI 87 (348)
T ss_pred HHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhc----c-----------CcCCCceECHHHHHHHHHHHHHcCCEEE
Confidence 445566678888888888777888877665543211 1 1124678999999999999999999887
Q ss_pred Ec
Q 013892 308 AD 309 (434)
Q Consensus 308 ~D 309 (434)
-.
T Consensus 88 PE 89 (348)
T cd06562 88 PE 89 (348)
T ss_pred Ee
Confidence 54
No 437
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=67.92 E-value=1e+02 Score=28.54 Aligned_cols=82 Identities=11% Similarity=0.009 Sum_probs=47.2
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+...|. ..|-+|++..-.-...... ++..|.++..+++|-. |.+.+++.++...++
T Consensus 11 k~~lItGa~~~iG~~ia~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 11 KIALITGASYGIGFAIAKAYA-KAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVT-----DEDGVQAMVSQIEKE 84 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHHHh
Confidence 346666655544445555566 5677777665443333322 2334667777777643 677888877765444
Q ss_pred CCCeeEEEEec
Q 013892 268 GITVRALVVIN 278 (434)
Q Consensus 268 g~~~~~i~l~~ 278 (434)
-.+...++.+.
T Consensus 85 ~~~id~li~~a 95 (265)
T PRK07097 85 VGVIDILVNNA 95 (265)
T ss_pred CCCCCEEEECC
Confidence 33566666553
No 438
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=67.73 E-value=1.1e+02 Score=28.66 Aligned_cols=81 Identities=12% Similarity=0.013 Sum_probs=45.0
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+...|. ..|..|++....-...... +...|.++..+.+|-. |.+.+.+.++...++
T Consensus 11 k~vlVtGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELA-RAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVL-----DKESLEQARQQILED 84 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 446666555444455556666 5787877765443333222 2334667777776632 567777766655443
Q ss_pred CCCeeEEEEe
Q 013892 268 GITVRALVVI 277 (434)
Q Consensus 268 g~~~~~i~l~ 277 (434)
..+...++.+
T Consensus 85 ~g~id~li~~ 94 (278)
T PRK08277 85 FGPCDILING 94 (278)
T ss_pred cCCCCEEEEC
Confidence 3355655544
No 439
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=67.71 E-value=1.2e+02 Score=29.84 Aligned_cols=107 Identities=13% Similarity=0.020 Sum_probs=61.2
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEE--EEcCCCCh------hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHH
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGI--LCPIPQYP------LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQL 261 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~V--lv~~p~y~------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 261 (434)
.|-|+..+||.....++..+.. .-|..+ +..++.|. .....++.+|.....+.. |.+.+.+..
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~-~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~ 130 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKK-KLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQ 130 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHH-HhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHH
Confidence 5667888999888776633322 223333 34556654 344456668888877654 445554444
Q ss_pred HHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCcc
Q 013892 262 EAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (434)
Q Consensus 262 ~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 317 (434)
... .+ +..+|+..+. ......+.++|+++|+.+|+.....+-.|
T Consensus 131 ~~~------~~-----~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~~dE~f 174 (343)
T TIGR03573 131 RAY------FK-----KVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGENIAEEY 174 (343)
T ss_pred HHH------Hh-----ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCCHHHhc
Confidence 331 11 2334443322 23467888999999998887654444333
No 440
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=66.89 E-value=79 Score=28.86 Aligned_cols=81 Identities=10% Similarity=0.028 Sum_probs=45.4
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEc-CCCChh---HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++. ...-.. ....++..+.++..+..|.. |.+.+.+.++...+.
T Consensus 6 ~vlItGa~g~iG~~~a~~l~-~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 6 VALVTGSSRGIGKAIALRLA-EEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVG-----DVEKIKEMFAQIDEE 79 (250)
T ss_pred EEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 45666655444455566666 578776652 211111 22233445777777777643 677888877765444
Q ss_pred CCCeeEEEEec
Q 013892 268 GITVRALVVIN 278 (434)
Q Consensus 268 g~~~~~i~l~~ 278 (434)
..++..|+.+.
T Consensus 80 ~~~id~vi~~a 90 (250)
T PRK08063 80 FGRLDVFVNNA 90 (250)
T ss_pred cCCCCEEEECC
Confidence 33566666553
No 441
>PRK06841 short chain dehydrogenase; Provisional
Probab=66.66 E-value=1e+02 Score=28.15 Aligned_cols=81 Identities=17% Similarity=0.122 Sum_probs=43.3
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+...|. ..|..|++...............+..+..+++|- .|.+.+++.++...++..+
T Consensus 16 k~vlItGas~~IG~~la~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 16 KVAVVTGGASGIGHAIAELFA-AKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDV-----SDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecC-----CCHHHHHHHHHHHHHHhCC
Confidence 456666554444444555566 5787877765443322222222344455566553 2677777777665444335
Q ss_pred eeEEEEe
Q 013892 271 VRALVVI 277 (434)
Q Consensus 271 ~~~i~l~ 277 (434)
..+++.+
T Consensus 90 ~d~vi~~ 96 (255)
T PRK06841 90 IDILVNS 96 (255)
T ss_pred CCEEEEC
Confidence 5665554
No 442
>PRK08263 short chain dehydrogenase; Provisional
Probab=66.49 E-value=93 Score=29.08 Aligned_cols=80 Identities=15% Similarity=0.115 Sum_probs=43.0
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+...|. ..|..|++..-.-..........+..+..+..|- -|.+.+++.++...+.-.++
T Consensus 5 ~vlItGasg~iG~~~a~~l~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAAL-ERGDRVVATARDTATLADLAEKYGDRLLPLALDV-----TDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred EEEEeCCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHhccCCeeEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 35666554444445555565 5787777665443333333344444555565553 26677777776544332345
Q ss_pred eEEEEe
Q 013892 272 RALVVI 277 (434)
Q Consensus 272 ~~i~l~ 277 (434)
.+++.+
T Consensus 79 d~vi~~ 84 (275)
T PRK08263 79 DIVVNN 84 (275)
T ss_pred CEEEEC
Confidence 555544
No 443
>PLN02955 8-amino-7-oxononanoate synthase
Probab=66.42 E-value=1.7e+02 Score=30.39 Aligned_cols=138 Identities=11% Similarity=0.125 Sum_probs=78.4
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH-HHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcC--
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS-PAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG-- 236 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~-~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g-- 236 (434)
.+.|.--...++++++..+-+.+ ||.+......+.+.... +-+...+..+. +. +..++..-+|.....++....
T Consensus 109 SndYLGL~~~p~v~~a~~~ai~~-yG~g~~gSrl~~G~~~~h~~LE~~LA~f~-g~-e~all~sSGy~AN~~~i~aL~~~ 185 (476)
T PLN02955 109 GNDYLGLSSHPTISNAAANAAKE-YGMGPKGSALICGYTTYHRLLESSLADLK-KK-EDCLVCPTGFAANMAAMVAIGSV 185 (476)
T ss_pred ccCccCCCCCHHHHHHHHHHHHH-cCCCCCCcCccccChHHHHHHHHHHHHHH-CC-CcEEEECChHHHHHHHHHHHhhc
Confidence 56688777789999999998854 78766655555554433 33666666665 33 445555556665555444331
Q ss_pred ------------CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCC
Q 013892 237 ------------GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL 304 (434)
Q Consensus 237 ------------~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~ 304 (434)
.+-..+-.|+. .-..|...++-.+. +..+-+...+|| +.+.++++++-+.+...
T Consensus 186 ~~~~~~~~~~~~~~~d~i~~D~~-----~HaSI~dG~~ls~~---~~~a~~~~f~HN------D~~~Le~~L~~~~~~~~ 251 (476)
T PLN02955 186 ASLLAASGKPLKNEKVAIFSDAL-----NHASIIDGVRLAER---QGNVEVFVYRHC------DMYHLNSLLSSCKMKRK 251 (476)
T ss_pred cccccccccccCCCCcEEEEecc-----chHHHHHHHHhccc---cCCceEEEeCCC------CHHHHHHHHHhCCCCce
Confidence 11111112221 22334444432111 111334445677 45677777766655678
Q ss_pred EEEEccCCCC
Q 013892 305 VLLADEVYQE 314 (434)
Q Consensus 305 ~li~Deay~~ 314 (434)
+||+|.+|..
T Consensus 252 ~Vv~EgV~Sm 261 (476)
T PLN02955 252 VVVTDSLFSM 261 (476)
T ss_pred EEEEeCCCCC
Confidence 9999999885
No 444
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=66.39 E-value=1.6e+02 Score=30.01 Aligned_cols=155 Identities=9% Similarity=0.030 Sum_probs=74.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCC----CCCCE-EEcC---ChHHHHHHHHHHH
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPA----DPNDI-FLTD---GASPAVHMMMQLL 210 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~----~~~~i-~~t~---G~~~al~~~l~~l 210 (434)
.+.+.+++.+.+.+..... ........++++.+.+.+....+... .+..| +++. |=|..+..+...+
T Consensus 191 dV~~~~~~~ll~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~vI~LVGptGvGKTTTiaKLA~~L 265 (436)
T PRK11889 191 DVEQYFIHAYAEKLKVKFE-----NATMITEEEVIEYILEDMRSHFNTENVFEKEVQTIALIGPTGVGKTTTLAKMAWQF 265 (436)
T ss_pred CCCHHHHHHHHHHHHhhhc-----ccccCCHHHHHHHHHHHHHHHhccccccccCCcEEEEECCCCCcHHHHHHHHHHHH
Confidence 3566677766655543211 11111224555555555544333221 11223 3433 3355566665556
Q ss_pred hcCCCCEEE-EcCCCCh-hHHH----HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC-CCCC
Q 013892 211 IRSENDGIL-CPIPQYP-LYSA----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP-GNPT 283 (434)
Q Consensus 211 ~~~~gd~Vl-v~~p~y~-~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p-~NPt 283 (434)
. ..|.+|. +..-+|. .... ..+..|+.++.. .+.+++.+.+....... +...|++..+ .|+
T Consensus 266 ~-~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~---------~d~~~L~~aL~~lk~~~-~~DvVLIDTaGRs~- 333 (436)
T PRK11889 266 H-GKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV---------RDEAAMTRALTYFKEEA-RVDYILIDTAGKNY- 333 (436)
T ss_pred H-HcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec---------CCHHHHHHHHHHHHhcc-CCCEEEEeCccccC-
Confidence 5 4565544 3333443 2222 222345444332 25677878776653211 3567888876 333
Q ss_pred ccCCCHHHHHHHHHHHHH---cCCEEEEccCCC
Q 013892 284 GQVLAEENQRAIVDFCKK---EGLVLLADEVYQ 313 (434)
Q Consensus 284 G~~~~~~~l~~i~~~~~~---~~~~li~Deay~ 313 (434)
-+.+.++++.++++. +.+++++|....
T Consensus 334 ---kd~~lm~EL~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 334 ---RASETVEEMIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred ---cCHHHHHHHHHHHhhcCCCeEEEEECCccC
Confidence 233446666666553 456777777544
No 445
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=65.51 E-value=49 Score=30.36 Aligned_cols=100 Identities=18% Similarity=0.202 Sum_probs=58.0
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEE----EcC---------CCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHH
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGIL----CPI---------PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKK 259 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vl----v~~---------p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 259 (434)
+++-+|+.+....+.+++. + -+.+. ++. +........++..|..++.++...+ ..-..++|.+
T Consensus 4 v~l~SGGKDS~lAl~~a~~-~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~--~~~~~~~l~~ 79 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALR-Q-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGD--EEDYVEDLKE 79 (218)
T ss_dssp EEE--SSHHHHHHHHHHHH-T--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE-----CCCHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHH-h-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCc--cchhhHHHHH
Confidence 5677899999888888775 3 32211 111 1122345567888999988887622 1223677777
Q ss_pred HHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 260 ~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
.+++. ++.+++ +|.+.+..+...+-++|.+.|+-.+.
T Consensus 80 ~l~~~-----~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~~ 116 (218)
T PF01902_consen 80 ALKEL-----KVEAVV-------FGDIDSEYQRNWVERVCERLGLEAVF 116 (218)
T ss_dssp HHCTC-------SEEE---------TTS-HHHHHHHHHHHHHCT-EEE-
T ss_pred HHHHc-----CCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEEe
Confidence 77653 567777 99999999999999999999986553
No 446
>PRK07791 short chain dehydrogenase; Provisional
Probab=65.47 E-value=1.2e+02 Score=28.58 Aligned_cols=99 Identities=17% Similarity=0.097 Sum_probs=51.5
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC---------hhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY---------PLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKK 259 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y---------~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 259 (434)
.+++|.|+...-..+...|. ..|-.|++..-.. ..... .++..|.++..+.+|- -|.+.+++
T Consensus 8 ~~lITGas~GIG~aia~~la-~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~v~~ 81 (286)
T PRK07791 8 VVIVTGAGGGIGRAHALAFA-AEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDI-----ADWDGAAN 81 (286)
T ss_pred EEEEECCCchHHHHHHHHHH-HCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCC-----CCHHHHHH
Confidence 45555555544455555666 5777777654322 22222 2333466777776653 36777877
Q ss_pred HHHHHHhcCCCeeEEEEecCCC-CCc--cCCCHHHHHHHHH
Q 013892 260 QLEAAKAKGITVRALVVINPGN-PTG--QVLAEENQRAIVD 297 (434)
Q Consensus 260 ~l~~~~~~g~~~~~i~l~~p~N-PtG--~~~~~~~l~~i~~ 297 (434)
.++...++..+...++. |..- ..+ ..++.+++++..+
T Consensus 82 ~~~~~~~~~g~id~lv~-nAG~~~~~~~~~~~~~~~~~~~~ 121 (286)
T PRK07791 82 LVDAAVETFGGLDVLVN-NAGILRDRMIANMSEEEWDAVIA 121 (286)
T ss_pred HHHHHHHhcCCCCEEEE-CCCCCCCCCcccCCHHHHHHHHH
Confidence 77765544335665543 3321 111 2345556655443
No 447
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=65.40 E-value=66 Score=29.77 Aligned_cols=100 Identities=13% Similarity=0.052 Sum_probs=51.2
Q ss_pred CCEEEcCChH-HHH-HHHHHHHhcCCCCEEEEcC-------CCC----hh---HHHHHHHcCCeEEEEecCCCCCCCCCH
Q 013892 191 NDIFLTDGAS-PAV-HMMMQLLIRSENDGILCPI-------PQY----PL---YSASIALHGGTLVPYYLDEATGWGLET 254 (434)
Q Consensus 191 ~~i~~t~G~~-~al-~~~l~~l~~~~gd~Vlv~~-------p~y----~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (434)
..+++|.|+. .+| ..+.+.|. ..|..|++.. ..+ .. ....++..|.++..+.+|-. |.
T Consensus 7 k~vlVtGas~~~giG~~~a~~l~-~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~-----~~ 80 (256)
T PRK12859 7 KVAVVTGVSRLDGIGAAICKELA-EAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLT-----QN 80 (256)
T ss_pred cEEEEECCCCCCChHHHHHHHHH-HCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCC-----CH
Confidence 4566665542 233 33444455 5787777642 111 11 11223445778888777633 67
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCC---CccCCCHHHHHHHHH
Q 013892 255 SEVKKQLEAAKAKGITVRALVVINPGNP---TGQVLAEENQRAIVD 297 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~p~NP---tG~~~~~~~l~~i~~ 297 (434)
+++++.++...++..+...++ .|+.-. .-..++.+++++..+
T Consensus 81 ~~i~~~~~~~~~~~g~id~li-~~ag~~~~~~~~~~~~~~~~~~~~ 125 (256)
T PRK12859 81 DAPKELLNKVTEQLGYPHILV-NNAAYSTNNDFSNLTAEELDKHYM 125 (256)
T ss_pred HHHHHHHHHHHHHcCCCcEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 888888877654433455544 444211 123445555554433
No 448
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=65.33 E-value=9.7 Score=37.05 Aligned_cols=65 Identities=15% Similarity=0.327 Sum_probs=44.9
Q ss_pred HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 307 (434)
+.+.+...+.++..+.+.++.+|.+....+.+.-+. . ..|..++.+++++|++.|+++|+-||
T Consensus 23 ~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~----------------g-~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 23 QLDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQK----------------A-SDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred HHHHHHHhCCeEEEEEEecCCCceeecCCCcccccc----------------C-CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 344556678888888877777777765543322110 0 13567999999999999999999877
Q ss_pred Ec
Q 013892 308 AD 309 (434)
Q Consensus 308 ~D 309 (434)
-.
T Consensus 86 PE 87 (311)
T cd06570 86 PE 87 (311)
T ss_pred Ee
Confidence 43
No 449
>PRK12743 oxidoreductase; Provisional
Probab=65.23 E-value=79 Score=29.15 Aligned_cols=80 Identities=16% Similarity=0.008 Sum_probs=46.0
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcC-CCChhH---HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~-p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|-+|++.. ..-... ...++..|.++..+.+|-. |.+.+++.+++..++
T Consensus 4 ~vlItGas~giG~~~a~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 77 (256)
T PRK12743 4 VAIVTASDSGIGKACALLLA-QQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLS-----DLPEGAQALDKLIQR 77 (256)
T ss_pred EEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 45666665555555666666 5787876642 222222 2233445767777766633 677777777765544
Q ss_pred CCCeeEEEEe
Q 013892 268 GITVRALVVI 277 (434)
Q Consensus 268 g~~~~~i~l~ 277 (434)
..+...|+.+
T Consensus 78 ~~~id~li~~ 87 (256)
T PRK12743 78 LGRIDVLVNN 87 (256)
T ss_pred cCCCCEEEEC
Confidence 3356666554
No 450
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=65.16 E-value=1.1e+02 Score=27.98 Aligned_cols=100 Identities=11% Similarity=0.048 Sum_probs=52.9
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+...|. +.|..|++..-.-...... ++..+.++..+++|-. |.+.+++.+....++
T Consensus 10 k~~lItGas~giG~~ia~~L~-~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 10 KNILITGSAQGIGFLLATGLA-EYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVT-----HKQEVEAAIEHIEKD 83 (254)
T ss_pred CEEEEECCCChHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCC-----CHHHHHHHHHHHHHh
Confidence 346666655555555566666 5787877765432222222 2233556666666533 667777777665444
Q ss_pred CCCeeEEEEecCCCCCc--cCCCHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~ 296 (434)
..+...++.+-...+.+ ...+.+++++..
T Consensus 84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~ 114 (254)
T PRK08085 84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVI 114 (254)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHH
Confidence 33566665543221111 124555665544
No 451
>smart00642 Aamy Alpha-amylase domain.
Probab=64.93 E-value=31 Score=30.17 Aligned_cols=27 Identities=22% Similarity=0.395 Sum_probs=24.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCC
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
+.++++++++.|+++|+-||.|-+...
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 468999999999999999999998764
No 452
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=64.92 E-value=81 Score=29.91 Aligned_cols=98 Identities=15% Similarity=0.173 Sum_probs=50.6
Q ss_pred CEEEcCChHHHHHHHH-HHHhcCCCCEEEEcCCCChhHHH----HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 192 DIFLTDGASPAVHMMM-QLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l-~~l~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..++-+|++.+|...+ +.|. ..|..|++..-.=.-... .-...|.++..+++|-. +.+++++..++...
T Consensus 7 ~~~lITGASsGIG~~~A~~lA-~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs-----~~~~~~~l~~~l~~ 80 (265)
T COG0300 7 KTALITGASSGIGAELAKQLA-RRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLS-----DPEALERLEDELKE 80 (265)
T ss_pred cEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCC-----ChhHHHHHHHHHHh
Confidence 3455566777776554 4454 567666555544443333 33335677777777644 45555555554444
Q ss_pred cCCCeeEEEEecCCC-CCc--cCCCHHHHHHHH
Q 013892 267 KGITVRALVVINPGN-PTG--QVLAEENQRAIV 296 (434)
Q Consensus 267 ~g~~~~~i~l~~p~N-PtG--~~~~~~~l~~i~ 296 (434)
.+..+. ++++|.+- -.| ...+.++.++++
T Consensus 81 ~~~~Id-vLVNNAG~g~~g~f~~~~~~~~~~mi 112 (265)
T COG0300 81 RGGPID-VLVNNAGFGTFGPFLELSLDEEEEMI 112 (265)
T ss_pred cCCccc-EEEECCCcCCccchhhCChHHHHHHH
Confidence 443454 45555532 233 233444444444
No 453
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=64.86 E-value=1.1e+02 Score=27.96 Aligned_cols=79 Identities=13% Similarity=0.105 Sum_probs=41.8
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR 272 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~ 272 (434)
+++|.|+...-..+...|. ..|..|++..-.-..........+.++..+..|-. |.+.+++.++...+...++.
T Consensus 3 vlItGasg~iG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 3 VLVTGATAGFGECITRRFI-QQGHKVIATGRRQERLQELKDELGDNLYIAQLDVR-----NRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred EEEECCCchHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhccceEEEEecCC-----CHHHHHHHHHHHHHHcCCCC
Confidence 4555444333344455555 57877776654323333333334556666666533 66777777765544333455
Q ss_pred EEEEe
Q 013892 273 ALVVI 277 (434)
Q Consensus 273 ~i~l~ 277 (434)
.++.+
T Consensus 77 ~vi~~ 81 (248)
T PRK10538 77 VLVNN 81 (248)
T ss_pred EEEEC
Confidence 55543
No 454
>PRK07825 short chain dehydrogenase; Provisional
Probab=64.79 E-value=1.2e+02 Score=28.32 Aligned_cols=79 Identities=19% Similarity=0.066 Sum_probs=40.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|-.|++..-.-..........+ ++..+.+|-. |.+.+++.++...+...+.
T Consensus 7 ~ilVtGasggiG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~i 79 (273)
T PRK07825 7 VVAITGGARGIGLATARALA-ALGARVAIGDLDEALAKETAAELG-LVVGGPLDVT-----DPASFAAFLDAVEADLGPI 79 (273)
T ss_pred EEEEeCCCchHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhc-cceEEEccCC-----CHHHHHHHHHHHHHHcCCC
Confidence 45555544433344455565 577777766543333333333333 2344444422 6777777776654442245
Q ss_pred eEEEEe
Q 013892 272 RALVVI 277 (434)
Q Consensus 272 ~~i~l~ 277 (434)
..++.+
T Consensus 80 d~li~~ 85 (273)
T PRK07825 80 DVLVNN 85 (273)
T ss_pred CEEEEC
Confidence 555443
No 455
>PRK06482 short chain dehydrogenase; Provisional
Probab=64.51 E-value=1e+02 Score=28.69 Aligned_cols=80 Identities=19% Similarity=0.147 Sum_probs=44.1
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+...|. ..|..|++..-............+.++..+..|- -|.+.+++.++...+...++
T Consensus 4 ~vlVtGasg~IG~~la~~L~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 4 TWFITGASSGFGRGMTERLL-ARGDRVAATVRRPDALDDLKARYGDRLWVLQLDV-----TDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred EEEEecCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhccCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 36666655444445555666 5788887765544333333333444555555553 26777777776544333345
Q ss_pred eEEEEe
Q 013892 272 RALVVI 277 (434)
Q Consensus 272 ~~i~l~ 277 (434)
..|+.+
T Consensus 78 d~vi~~ 83 (276)
T PRK06482 78 DVVVSN 83 (276)
T ss_pred CEEEEC
Confidence 555544
No 456
>PRK06128 oxidoreductase; Provisional
Probab=64.41 E-value=89 Score=29.78 Aligned_cols=101 Identities=15% Similarity=0.013 Sum_probs=53.5
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC-----hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-----PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y-----~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+...-..+...|. ..|..|++....- ......++..|.++..+.+|-. |.+.+++.++...
T Consensus 56 k~vlITGas~gIG~~~a~~l~-~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~ 129 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFA-REGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLK-----DEAFCRQLVERAV 129 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHH-HcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCC-----CHHHHHHHHHHHH
Confidence 356666665555555566666 5787777643211 1122334445777777776633 6777777777654
Q ss_pred hcCCCeeEEEEecCCC-CC--ccCCCHHHHHHHHH
Q 013892 266 AKGITVRALVVINPGN-PT--GQVLAEENQRAIVD 297 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~N-Pt--G~~~~~~~l~~i~~ 297 (434)
+...++..+|.+-... +. -..++.+++++..+
T Consensus 130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~ 164 (300)
T PRK06128 130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFK 164 (300)
T ss_pred HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHH
Confidence 4333555555442211 11 12345566655443
No 457
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=63.52 E-value=1.2e+02 Score=27.55 Aligned_cols=84 Identities=14% Similarity=0.035 Sum_probs=45.6
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+...|. ..|..|++..-.-..... .+...+.++..+.+|-. +.+.+++.++...++.
T Consensus 9 ~vlVtG~sg~iG~~l~~~L~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 9 NALITGAGRGIGRAVAIALA-KEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVS-----DYEEVTAAIEQLKNEL 82 (239)
T ss_pred EEEEEcCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 45565544433344455555 567777665432222222 23334556766766533 6778888777654443
Q ss_pred CCeeEEEEecCCC
Q 013892 269 ITVRALVVINPGN 281 (434)
Q Consensus 269 ~~~~~i~l~~p~N 281 (434)
.++.+|+.+...+
T Consensus 83 ~~id~vi~~ag~~ 95 (239)
T PRK07666 83 GSIDILINNAGIS 95 (239)
T ss_pred CCccEEEEcCccc
Confidence 4577766664433
No 458
>PRK07109 short chain dehydrogenase; Provisional
Probab=63.52 E-value=1.3e+02 Score=29.44 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=45.0
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHH---HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.... ..++..|.++..+.+|-. |.+.+++.++...++
T Consensus 9 k~vlITGas~gIG~~la~~la-~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~-----d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFA-RRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVA-----DAEAVQAAADRAEEE 82 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 345555554444444555666 57777776554433222 223445777777777633 677888877765444
Q ss_pred CCCeeEEEE
Q 013892 268 GITVRALVV 276 (434)
Q Consensus 268 g~~~~~i~l 276 (434)
-.+...++.
T Consensus 83 ~g~iD~lIn 91 (334)
T PRK07109 83 LGPIDTWVN 91 (334)
T ss_pred CCCCCEEEE
Confidence 334555443
No 459
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=63.24 E-value=91 Score=28.80 Aligned_cols=81 Identities=10% Similarity=0.061 Sum_probs=42.8
Q ss_pred CCEEEcCCh--HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~--~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+ ...-..+.+.|. ..|.+|++..-. ......++ ..+..+..+.+|- -|.+.+++.++...++
T Consensus 8 k~~lItGas~~~gIG~a~a~~la-~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIK-DQGATVIYTYQN-DRMKKSLQKLVDEEDLLVECDV-----ASDESIERAFATIKER 80 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHH-HCCCEEEEecCc-hHHHHHHHhhccCceeEEeCCC-----CCHHHHHHHHHHHHHH
Confidence 345666655 233444555566 578888876433 22222222 2233455666653 3677777777765444
Q ss_pred CCCeeEEEEecC
Q 013892 268 GITVRALVVINP 279 (434)
Q Consensus 268 g~~~~~i~l~~p 279 (434)
..+..+++ +|.
T Consensus 81 ~g~iD~lv-~nA 91 (252)
T PRK06079 81 VGKIDGIV-HAI 91 (252)
T ss_pred hCCCCEEE-Ecc
Confidence 33565544 444
No 460
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=63.16 E-value=1.2e+02 Score=27.65 Aligned_cols=82 Identities=16% Similarity=0.075 Sum_probs=48.0
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|.+|++..-.-..... .++..+.++..+.+|- -|.+.+.+.++...+.
T Consensus 5 ~~vlItG~sg~iG~~la~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALA-KEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDV-----TDEEAINAGIDYAVET 78 (258)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 357777666555555666666 578777765544333222 2333466666666653 3677887777765444
Q ss_pred CCCeeEEEEec
Q 013892 268 GITVRALVVIN 278 (434)
Q Consensus 268 g~~~~~i~l~~ 278 (434)
...+.+|+.+.
T Consensus 79 ~~~~d~vi~~a 89 (258)
T PRK12429 79 FGGVDILVNNA 89 (258)
T ss_pred cCCCCEEEECC
Confidence 33566666553
No 461
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=63.13 E-value=96 Score=28.07 Aligned_cols=94 Identities=14% Similarity=0.197 Sum_probs=54.3
Q ss_pred CCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 189 ~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
....|++..|+..|...+-..+ +.|-.|.+-+|....-...+...| ++..+.-. | ..+.+ .
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll--~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~~----~--~~~dl----~------ 68 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLL--KAGAQLRVIAEELESELTLLAEQG-GITWLARC----F--DADIL----E------ 68 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHH--HCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeCC----C--CHHHh----C------
Confidence 3457888888888887775444 567777777777654333333334 44443321 1 22222 1
Q ss_pred CCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEE-EEcc
Q 013892 269 ITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL-LADE 310 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l-i~De 310 (434)
.. .+++..++++ +.-.+|.+.|++.++++ ++|+
T Consensus 69 -~~-~lVi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~ 102 (205)
T TIGR01470 69 -GA-FLVIAATDDE-------ELNRRVAHAARARGVPVNVVDD 102 (205)
T ss_pred -Cc-EEEEECCCCH-------HHHHHHHHHHHHcCCEEEECCC
Confidence 23 3455555553 22468999999999877 3454
No 462
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=62.72 E-value=94 Score=28.28 Aligned_cols=79 Identities=15% Similarity=0.091 Sum_probs=41.9
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEEc-CCCChhH---HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
+++|.|+...-..+.+.|. ..|..|++. ...-..- ...+...|.++..+..|-. |.+.+++.+++..+..
T Consensus 6 ~lVtG~s~giG~~~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 6 AYVTGGMGGIGTSICQRLH-KDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVG-----DWDSTKAAFDKVKAEV 79 (246)
T ss_pred EEEECCCChHHHHHHHHHH-HcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHh
Confidence 4555544444455556666 577776663 2211111 1222334667776666633 6777777776654443
Q ss_pred CCeeEEEEe
Q 013892 269 ITVRALVVI 277 (434)
Q Consensus 269 ~~~~~i~l~ 277 (434)
.+...|+.+
T Consensus 80 ~~id~li~~ 88 (246)
T PRK12938 80 GEIDVLVNN 88 (246)
T ss_pred CCCCEEEEC
Confidence 356655544
No 463
>PRK07062 short chain dehydrogenase; Provisional
Probab=62.47 E-value=1.3e+02 Score=27.77 Aligned_cols=80 Identities=20% Similarity=0.127 Sum_probs=43.1
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH---H-c-CCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---L-H-GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~---~-~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+...-..+.+.|. ..|.+|++....-.......+ . . +.++..+.+|- -|.+.+++.++...
T Consensus 9 k~~lItGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~ 82 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLL-EAGASVAICGRDEERLASAEARLREKFPGARLLAARCDV-----LDEADVAAFAAAVE 82 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecC-----CCHHHHHHHHHHHH
Confidence 345555555444445555565 578788776544333322222 1 1 34666676653 36777777777654
Q ss_pred hcCCCeeEEEE
Q 013892 266 AKGITVRALVV 276 (434)
Q Consensus 266 ~~g~~~~~i~l 276 (434)
+...+...++.
T Consensus 83 ~~~g~id~li~ 93 (265)
T PRK07062 83 ARFGGVDMLVN 93 (265)
T ss_pred HhcCCCCEEEE
Confidence 43334555443
No 464
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=62.38 E-value=26 Score=29.01 Aligned_cols=58 Identities=12% Similarity=0.205 Sum_probs=44.1
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe--cC---CCCCccCCCHHHHHHHHHHHHHcCC
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI--NP---GNPTGQVLAEENQRAIVDFCKKEGL 304 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~--~p---~NPtG~~~~~~~l~~i~~~~~~~~~ 304 (434)
.+++.+|+.- .+|++.+.++++. ....|++. .| |+..|.......++.+-++..+.|+
T Consensus 29 vriIrvpC~G----rv~~~~il~Af~~------GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 29 VRIIRVPCSG----RVDPEFILRAFEK------GADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred eEEEEccCCC----ccCHHHHHHHHHc------CCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 5677777653 7899999999987 56666663 55 5688998888888888888877654
No 465
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=62.31 E-value=1.2e+02 Score=28.06 Aligned_cols=82 Identities=15% Similarity=0.090 Sum_probs=45.4
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC-hh---HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y-~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
...+++|.|+...-..+.+.|. ..|-.|++....= .. ....++..+.++..+.+|-. |.+.+.+.++...
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~-~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~i~~~~~~~~ 80 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFG-KEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVT-----VESDVVNLIQTAV 80 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCC-----CHHHHHHHHHHHH
Confidence 3456666666555555666666 5776666543211 11 22223334667777776643 6777777776654
Q ss_pred hcCCCeeEEEEe
Q 013892 266 AKGITVRALVVI 277 (434)
Q Consensus 266 ~~g~~~~~i~l~ 277 (434)
++..++.+++.+
T Consensus 81 ~~~g~id~lv~~ 92 (261)
T PRK08936 81 KEFGTLDVMINN 92 (261)
T ss_pred HHcCCCCEEEEC
Confidence 443356655544
No 466
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=62.01 E-value=1.6e+02 Score=28.52 Aligned_cols=108 Identities=13% Similarity=0.133 Sum_probs=64.9
Q ss_pred CCCCCEEEcCChHHHHHHHHHHHhcCCCC--EEEEcC--CCChhH--HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHH
Q 013892 188 ADPNDIFLTDGASPAVHMMMQLLIRSEND--GILCPI--PQYPLY--SASIALHGGTLVPYYLDEATGWGLETSEVKKQL 261 (434)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~l~~l~~~~gd--~Vlv~~--p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 261 (434)
+...++++|.|.+.++..++.... +.|. +|++.+ |.+.+. ...++..|..+..+.- .++-..+
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~-~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~D----------sa~~~~~ 185 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAA-DRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIVD----------SAVGAFM 185 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhh-hcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEec----------hHHHHHH
Confidence 345689999999988888887775 5665 666655 887764 3456777877776641 1222233
Q ss_pred HHHHhcCCCeeEEEEe-cCCCCCccCCCHHHHHHHHHHHHHcCCEEE-EccCCC
Q 013892 262 EAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLL-ADEVYQ 313 (434)
Q Consensus 262 ~~~~~~g~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~~~~~~~~li-~Deay~ 313 (434)
+ ++..+++- +.---.|.++++-=--.|+..|++.+..++ +=|.|-
T Consensus 186 ~-------~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~aesyK 232 (301)
T COG1184 186 S-------RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVAESYK 232 (301)
T ss_pred H-------hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEeeeec
Confidence 3 24444443 332223444444434567777888887554 446554
No 467
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=61.97 E-value=41 Score=24.35 Aligned_cols=60 Identities=17% Similarity=0.254 Sum_probs=36.8
Q ss_pred HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCC-HHHHHHHHHHHHHcCCEE
Q 013892 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA-EENQRAIVDFCKKEGLVL 306 (434)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~l 306 (434)
+...++..|.++..+.. ..+.+.. ....+++.+|.-. ++ .+++++|.+|+++=|.++
T Consensus 10 ~~~~L~~~g~~v~~~~~--------~~~~l~~----------~~~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lv 67 (70)
T PF14258_consen 10 LYQLLEEQGVKVERWRK--------PYEALEA----------DDGTLLVIGPDLR----LSEPEEAEALLEWVEAGNTLV 67 (70)
T ss_pred HHHHHHHCCCeeEEecc--------cHHHhCC----------CCCEEEEEeCCCC----CCchHHHHHHHHHHHcCCEEE
Confidence 44456667877765432 1333321 2335666666521 44 588999999999878788
Q ss_pred EEc
Q 013892 307 LAD 309 (434)
Q Consensus 307 i~D 309 (434)
|+|
T Consensus 68 l~a 70 (70)
T PF14258_consen 68 LAA 70 (70)
T ss_pred EeC
Confidence 765
No 468
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=61.62 E-value=1.3e+02 Score=27.54 Aligned_cols=80 Identities=16% Similarity=0.079 Sum_probs=44.6
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+.+.|. ..|..|++....-...... ++..|.++..+..|-. |.+.+++.++...++-
T Consensus 9 ~vlItGasg~iG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 9 TAVVTGAASGIGKEIALELA-RAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVT-----NEDAVNAGIDKVAERF 82 (262)
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 45666554444445556666 5787777766554333333 3334666766666533 6777777776543332
Q ss_pred CCeeEEEEe
Q 013892 269 ITVRALVVI 277 (434)
Q Consensus 269 ~~~~~i~l~ 277 (434)
.++..|+-+
T Consensus 83 ~~~d~vi~~ 91 (262)
T PRK13394 83 GSVDILVSN 91 (262)
T ss_pred CCCCEEEEC
Confidence 245555444
No 469
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed
Probab=61.51 E-value=86 Score=29.81 Aligned_cols=56 Identities=16% Similarity=0.280 Sum_probs=42.9
Q ss_pred CCHHHHHHHHHHHHhcCC--CeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc-----CCEEEEccCCCC
Q 013892 252 LETSEVKKQLEAAKAKGI--TVRALVVINPGNPTGQVLAEENQRAIVDFCKKE-----GLVLLADEVYQE 314 (434)
Q Consensus 252 ~d~~~l~~~l~~~~~~g~--~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~-----~~~li~Deay~~ 314 (434)
++.+.+++.++...+.+. +.++|. +|.+.+.+..+.+.++++++ +..+++|-+..+
T Consensus 68 ~~~~~i~~~l~~~~~~~~l~~~d~i~-------~G~l~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d 130 (281)
T PRK08176 68 IPDEWFSGYLRALQERDALRQLRAVT-------TGYMGSASQIKILAEWLTALRADHPDLLIMVDPVIGD 130 (281)
T ss_pred CCHHHHHHHHHHHHhcCccccCCEEE-------ECCCCCHHHHHHHHHHHHHHHHHCCCCcEEeCCcccc
Confidence 456778888876655442 578888 89999999999999999873 778999998544
No 470
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=61.50 E-value=25 Score=32.78 Aligned_cols=56 Identities=25% Similarity=0.357 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 013892 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 251 ~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
.++.+.+.+.++...+ +.++++|. +|.+.+.+.++.|.+++++++..+|+|-+..+
T Consensus 42 ~~~~~~~~~ql~~~~~-~~~~~aik-------iG~l~~~~~v~~i~~~l~~~~~~vV~DPVm~~ 97 (246)
T PF08543_consen 42 PVDSEMIKAQLDALLE-DMKFDAIK-------IGYLGSAEQVEIIADFLKKPKIPVVLDPVMGD 97 (246)
T ss_dssp E--HHHHHHHHHHHHH-TSC-SEEE-------E-S-SSHHHHHHHHHHHHHTTTEEEEE---EE
T ss_pred ECCHHHHHHHHHHhcc-cccccEEE-------EcccCCchhhhhHHHHHhccCCCEEEeccccc
Confidence 3467888888887654 34788999 99999999999999999989999999988764
No 471
>PRK06484 short chain dehydrogenase; Validated
Probab=61.32 E-value=96 Score=32.19 Aligned_cols=79 Identities=11% Similarity=0.070 Sum_probs=45.9
Q ss_pred CEEEcCChHHHHHH-HHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 192 DIFLTDGASPAVHM-MMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 192 ~i~~t~G~~~al~~-~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
.+++.+|++.+|-. +.+.|. ..|..|++..-.-.......+..+.++..+.+|- -|.+.+++.++...++..+
T Consensus 270 k~~lItGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 270 RVVAITGGARGIGRAVADRFA-AAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADI-----TDEAAVESAFAQIQARWGR 343 (520)
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 34444455555544 445555 5787887766544444455555666766666653 2677787777765544335
Q ss_pred eeEEEE
Q 013892 271 VRALVV 276 (434)
Q Consensus 271 ~~~i~l 276 (434)
...++.
T Consensus 344 id~li~ 349 (520)
T PRK06484 344 LDVLVN 349 (520)
T ss_pred CCEEEE
Confidence 655543
No 472
>PRK05854 short chain dehydrogenase; Provisional
Probab=61.25 E-value=1.1e+02 Score=29.54 Aligned_cols=80 Identities=16% Similarity=0.131 Sum_probs=42.9
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----c-CCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----H-GGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
.+++|.|+...-..+...|. ..|-+|++..-.-......+.. . +.++..+.+|-. |.+.+++.++...+
T Consensus 16 ~~lITGas~GIG~~~a~~La-~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~-----d~~sv~~~~~~~~~ 89 (313)
T PRK05854 16 RAVVTGASDGLGLGLARRLA-AAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLS-----SLASVAALGEQLRA 89 (313)
T ss_pred EEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCC-----CHHHHHHHHHHHHH
Confidence 45555544433344555566 5787887765443333222221 2 345666666633 67888877776544
Q ss_pred cCCCeeEEEEe
Q 013892 267 KGITVRALVVI 277 (434)
Q Consensus 267 ~g~~~~~i~l~ 277 (434)
...+...+|.+
T Consensus 90 ~~~~iD~li~n 100 (313)
T PRK05854 90 EGRPIHLLINN 100 (313)
T ss_pred hCCCccEEEEC
Confidence 44356655433
No 473
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=61.15 E-value=1.1e+02 Score=26.68 Aligned_cols=98 Identities=9% Similarity=0.045 Sum_probs=48.7
Q ss_pred EEcCChHHHHH-HHHHHHhcCCCCEEEEcCCC-C--h---hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 194 FLTDGASPAVH-MMMQLLIRSENDGILCPIPQ-Y--P---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 194 ~~t~G~~~al~-~~l~~l~~~~gd~Vlv~~p~-y--~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
++|.|. .++. .+.+.|.......|++.... - . .....++..|.++..+.+|- -|.+++.+.++...+
T Consensus 4 litGG~-gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv-----~d~~~v~~~~~~~~~ 77 (181)
T PF08659_consen 4 LITGGL-GGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDV-----TDPEAVAAALAQLRQ 77 (181)
T ss_dssp EEETTT-SHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--T-----TSHHHHHHHHHTSHT
T ss_pred EEECCc-cHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCc-----cCHHHHHHHHHHHHh
Confidence 444444 4444 34444442233444444433 1 1 24455666799999998874 488999999988776
Q ss_pred cCCCeeEEEEecCC--CCCccCCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPG--NPTGQVLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~--NPtG~~~~~~~l~~i~~ 297 (434)
+.++...|+-.-.- .-.-...+.+++++..+
T Consensus 78 ~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~ 110 (181)
T PF08659_consen 78 RFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLA 110 (181)
T ss_dssp TSS-EEEEEE-------B-GCC--HHHHHHHHH
T ss_pred ccCCcceeeeeeeeecccccccCCHHHHHHHHh
Confidence 66677777766332 11222334445555443
No 474
>PRK08643 acetoin reductase; Validated
Probab=61.09 E-value=1.3e+02 Score=27.47 Aligned_cols=80 Identities=10% Similarity=0.044 Sum_probs=44.1
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
+++|.|+...-..+.+.|. ..|..|++..-.-...... +...+.++..+.+|-. |.+.+++.++...++..
T Consensus 5 ~lItGas~giG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 5 ALVTGAGQGIGFAIAKRLV-EDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVS-----DRDQVFAAVRQVVDTFG 78 (256)
T ss_pred EEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHHHHHHHHcC
Confidence 4555555444444555566 5777776654332222222 2334566777766633 67778777776654433
Q ss_pred CeeEEEEec
Q 013892 270 TVRALVVIN 278 (434)
Q Consensus 270 ~~~~i~l~~ 278 (434)
+...++.+.
T Consensus 79 ~id~vi~~a 87 (256)
T PRK08643 79 DLNVVVNNA 87 (256)
T ss_pred CCCEEEECC
Confidence 566666553
No 475
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=60.98 E-value=18 Score=37.07 Aligned_cols=81 Identities=15% Similarity=0.233 Sum_probs=50.7
Q ss_pred HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC---CeeEEEE---ecC--CCCCccCCCHHHHHHHHHHH
Q 013892 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI---TVRALVV---INP--GNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~---~~~~i~l---~~p--~NPtG~~~~~~~l~~i~~~~ 299 (434)
+.+.+...+..+..+.+.++.+|.+.++.+.+.-+.-...+. ....++- ..| ..+.|..++++++++|++.|
T Consensus 27 ~Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA 106 (445)
T cd06569 27 LLDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYA 106 (445)
T ss_pred HHHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHH
Confidence 445566678889999888888898887666543221000000 0000110 011 12346789999999999999
Q ss_pred HHcCCEEEE
Q 013892 300 KKEGLVLLA 308 (434)
Q Consensus 300 ~~~~~~li~ 308 (434)
+++|+-||-
T Consensus 107 ~~rgI~VIP 115 (445)
T cd06569 107 KARHIEVIP 115 (445)
T ss_pred HHcCCEEEE
Confidence 999998774
No 476
>PRK06484 short chain dehydrogenase; Validated
Probab=60.97 E-value=1e+02 Score=32.02 Aligned_cols=80 Identities=11% Similarity=0.069 Sum_probs=47.2
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+..|.++..+.+|-. |.+.+++.++...++..+.
T Consensus 7 ~~lITGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 7 VVLVTGAAGGIGRAACQRFA-RAGDQVVVADRNVERARERADSLGPDHHALAMDVS-----DEAQIREGFEQLHREFGRI 80 (520)
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccC-----CHHHHHHHHHHHHHHhCCC
Confidence 45555555444445555566 57878777654444445555556777766766633 6777877777654443355
Q ss_pred eEEEEe
Q 013892 272 RALVVI 277 (434)
Q Consensus 272 ~~i~l~ 277 (434)
..++.+
T Consensus 81 D~li~n 86 (520)
T PRK06484 81 DVLVNN 86 (520)
T ss_pred CEEEEC
Confidence 555433
No 477
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=60.97 E-value=1.2e+02 Score=26.77 Aligned_cols=46 Identities=26% Similarity=0.528 Sum_probs=29.7
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEe-cCCCCCccCCCHHHHHHHHHHHHHcC
Q 013892 251 GLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEG 303 (434)
Q Consensus 251 ~~d~~~l~~~l~~~~~~g~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~~~~~~ 303 (434)
.+|.+++++.++..+.+|.+.-+|.+. .+-||- .=+++.+++++.|
T Consensus 130 ~ld~~~v~~~~~~l~~~gv~avAV~~~fS~~np~-------hE~~v~eii~e~g 176 (176)
T PF05378_consen 130 PLDEDEVREALRELKDKGVEAVAVSLLFSYRNPE-------HEQRVAEIIREEG 176 (176)
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECccCCCCHH-------HHHHHHHHHHhcC
Confidence 468899999999988876555444444 445653 3345666666654
No 478
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=60.82 E-value=1.6e+02 Score=28.21 Aligned_cols=97 Identities=13% Similarity=0.001 Sum_probs=51.1
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCCh-hH---HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~-~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+...|. ..|.+|++.+..-. .. ...++..|.++..+.+|-. |.+.+++.++...+
T Consensus 13 k~~lVTGas~gIG~~ia~~L~-~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~-----d~~~~~~~~~~~~~ 86 (306)
T PRK07792 13 KVAVVTGAAAGLGRAEALGLA-RLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDIS-----QRATADELVATAVG 86 (306)
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHHHHHHHHH
Confidence 345555555444444555566 57878877653322 12 2223445777877777633 67777777766544
Q ss_pred cCCCeeEEEEecCCCCC-c--cCCCHHHHHHH
Q 013892 267 KGITVRALVVINPGNPT-G--QVLAEENQRAI 295 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPt-G--~~~~~~~l~~i 295 (434)
..+...++ +|..... + ..++.+++++.
T Consensus 87 -~g~iD~li-~nAG~~~~~~~~~~~~~~~~~~ 116 (306)
T PRK07792 87 -LGGLDIVV-NNAGITRDRMLFNMSDEEWDAV 116 (306)
T ss_pred -hCCCCEEE-ECCCCCCCCCcccCCHHHHHHH
Confidence 22555554 4432211 1 12455666544
No 479
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=60.78 E-value=37 Score=28.87 Aligned_cols=55 Identities=27% Similarity=0.218 Sum_probs=42.6
Q ss_pred CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHH-HHHHHHHHHHHc-CC-EEEEccC
Q 013892 252 LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE-NQRAIVDFCKKE-GL-VLLADEV 311 (434)
Q Consensus 252 ~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~-~l~~i~~~~~~~-~~-~li~Dea 311 (434)
.+++.|.+.++++ .+..|++-.|.|..|...+.. ..+++++..+++ ++ +++.||-
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DER 97 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDER 97 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 5899999999987 888999999999999988854 366777666654 44 5567774
No 480
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=60.75 E-value=27 Score=33.61 Aligned_cols=75 Identities=8% Similarity=0.181 Sum_probs=42.6
Q ss_pred cCCCChhHHHHHHH--cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIAL--HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 221 ~~p~y~~~~~~~~~--~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
--|+|+...++-+. -..-++.+|.. .-++.++++.+. .+|.+++..-+- +.++-++|.++
T Consensus 50 G~~~y~sv~dlp~~~~~DlAvi~vp~~------~v~~~l~e~~~~------gvk~avI~s~Gf------~~~~~~~l~~~ 111 (291)
T PRK05678 50 GLPVFNTVAEAVEATGANASVIYVPPP------FAADAILEAIDA------GIDLIVCITEGI------PVLDMLEVKAY 111 (291)
T ss_pred CeeccCCHHHHhhccCCCEEEEEcCHH------HHHHHHHHHHHC------CCCEEEEECCCC------CHHHHHHHHHH
Confidence 34556666665553 34444444421 123444444443 567766665332 34555699999
Q ss_pred HHHcCCEEEEccCCC
Q 013892 299 CKKEGLVLLADEVYQ 313 (434)
Q Consensus 299 ~~~~~~~li~Deay~ 313 (434)
|+++|+.++==.+.+
T Consensus 112 a~~~girvlGPNc~G 126 (291)
T PRK05678 112 LERKKTRLIGPNCPG 126 (291)
T ss_pred HHHcCCEEECCCCCc
Confidence 999999887555443
No 481
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=60.67 E-value=1.4e+02 Score=27.46 Aligned_cols=98 Identities=14% Similarity=0.057 Sum_probs=52.2
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++....-...... ++..|.++..+.+|- -|.+.+++.++...++
T Consensus 12 k~vlVtG~s~gIG~~la~~l~-~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 12 KCAIITGAGAGIGKEIAITFA-TAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI-----TSEQELSALADFALSK 85 (255)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 345666555554555666666 5787887765544333222 233456666666653 2677777777665443
Q ss_pred CCCeeEEEEecC-CCCCccCCCHHHHHH
Q 013892 268 GITVRALVVINP-GNPTGQVLAEENQRA 294 (434)
Q Consensus 268 g~~~~~i~l~~p-~NPtG~~~~~~~l~~ 294 (434)
..+...++.+.. ..+.....+.+++++
T Consensus 86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~ 113 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPFDMPMADFRR 113 (255)
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHH
Confidence 335566655532 222222344455443
No 482
>PRK08278 short chain dehydrogenase; Provisional
Probab=60.42 E-value=1.5e+02 Score=27.74 Aligned_cols=80 Identities=14% Similarity=0.105 Sum_probs=45.8
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCCh----------hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP----------LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQL 261 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~----------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 261 (434)
.+++|.|+...-..+.+.|. ..|..|++...... .....++..|.++..+.+|- .+.+.+++.+
T Consensus 8 ~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~-----~~~~~i~~~~ 81 (273)
T PRK08278 8 TLFITGASRGIGLAIALRAA-RDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDV-----RDEDQVAAAV 81 (273)
T ss_pred EEEEECCCchHHHHHHHHHH-HCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHH
Confidence 46666665554455666666 57877776554332 11222344566777777663 3677787777
Q ss_pred HHHHhcCCCeeEEEEe
Q 013892 262 EAAKAKGITVRALVVI 277 (434)
Q Consensus 262 ~~~~~~g~~~~~i~l~ 277 (434)
+...++-.++..|+.+
T Consensus 82 ~~~~~~~g~id~li~~ 97 (273)
T PRK08278 82 AKAVERFGGIDICVNN 97 (273)
T ss_pred HHHHHHhCCCCEEEEC
Confidence 6654332356665544
No 483
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=60.27 E-value=1.4e+02 Score=27.41 Aligned_cols=79 Identities=15% Similarity=0.069 Sum_probs=39.9
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-..-...+...+. ..+++|- -|.+.+++.++...+...+
T Consensus 8 k~~lItGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~l~~~~~--~~~~~Dl-----~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFL-REGAKVAVLYNSAENEAKELREKGV--FTIKCDV-----GNRDQVKKSKEVVEKEFGR 79 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCcHHHHHHHHhCCC--eEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 345666555444455556666 5777776543211222222222343 4444442 2677777777665444335
Q ss_pred eeEEEEe
Q 013892 271 VRALVVI 277 (434)
Q Consensus 271 ~~~i~l~ 277 (434)
...++.+
T Consensus 80 id~li~~ 86 (255)
T PRK06463 80 VDVLVNN 86 (255)
T ss_pred CCEEEEC
Confidence 5555544
No 484
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=60.13 E-value=1.4e+02 Score=27.41 Aligned_cols=82 Identities=17% Similarity=0.016 Sum_probs=45.3
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCCh-hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
..+++|.|+...-..+.+.|. +.|-.|+..+..-. .....+...+.++..+.+|- -|.+.+++.+++..++..
T Consensus 11 k~~lItG~~~gIG~a~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLA-EAGCDIVGINIVEPTETIEQVTALGRRFLSLTADL-----RKIDGIPALLERAVAEFG 84 (253)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHHhC
Confidence 345666655544455555666 57877776443211 12223334466677676653 267788887776555443
Q ss_pred CeeEEEEecC
Q 013892 270 TVRALVVINP 279 (434)
Q Consensus 270 ~~~~i~l~~p 279 (434)
+...++ +++
T Consensus 85 ~~D~li-~~A 93 (253)
T PRK08993 85 HIDILV-NNA 93 (253)
T ss_pred CCCEEE-ECC
Confidence 555444 444
No 485
>PRK06182 short chain dehydrogenase; Validated
Probab=59.72 E-value=1.4e+02 Score=27.74 Aligned_cols=77 Identities=12% Similarity=0.074 Sum_probs=40.2
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-..... +...+...+..++. |.+.+++.++...+...++
T Consensus 5 ~vlItGasggiG~~la~~l~-~~G~~V~~~~r~~~~l~~-~~~~~~~~~~~Dv~-------~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 5 VALVTGASSGIGKATARRLA-AQGYTVYGAARRVDKMED-LASLGVHPLSLDVT-------DEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHH-HHhCCCeEEEeeCC-------CHHHHHHHHHHHHHhcCCC
Confidence 45666554444444555565 578888876544332222 22234444443332 5677777776554443356
Q ss_pred eEEEEe
Q 013892 272 RALVVI 277 (434)
Q Consensus 272 ~~i~l~ 277 (434)
..++.+
T Consensus 76 d~li~~ 81 (273)
T PRK06182 76 DVLVNN 81 (273)
T ss_pred CEEEEC
Confidence 555544
No 486
>PRK07985 oxidoreductase; Provisional
Probab=58.99 E-value=1.5e+02 Score=28.28 Aligned_cols=99 Identities=12% Similarity=0.031 Sum_probs=51.7
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC-----hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-----PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y-----~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+...-..+.+.|. ..|..|++....- ......+...|.++..+.+|-. |.+.+.+.++...
T Consensus 50 k~vlITGas~gIG~aia~~L~-~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~ 123 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYA-REGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLS-----DEKFARSLVHEAH 123 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHH-HCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCC-----CHHHHHHHHHHHH
Confidence 345666655444455566666 5788877643211 1122233445666666666533 6777877777654
Q ss_pred hcCCCeeEEEEecCCC--C--CccCCCHHHHHHHH
Q 013892 266 AKGITVRALVVINPGN--P--TGQVLAEENQRAIV 296 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~N--P--tG~~~~~~~l~~i~ 296 (434)
++..+...++.+ ... + .-...+.+++++..
T Consensus 124 ~~~g~id~lv~~-Ag~~~~~~~~~~~~~~~~~~~~ 157 (294)
T PRK07985 124 KALGGLDIMALV-AGKQVAIPDIADLTSEQFQKTF 157 (294)
T ss_pred HHhCCCCEEEEC-CCCCcCCCChhhCCHHHHHHHH
Confidence 443345555543 321 1 12234555665544
No 487
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=58.85 E-value=77 Score=30.24 Aligned_cols=55 Identities=25% Similarity=0.280 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHHh--cCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc-----CCEEEEccCCCC
Q 013892 253 ETSEVKKQLEAAKA--KGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE-----GLVLLADEVYQE 314 (434)
Q Consensus 253 d~~~l~~~l~~~~~--~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~-----~~~li~Deay~~ 314 (434)
..|.+.+.++...+ .....++|+ ||..-+.++.+.|.++.++. ++++++|-+.++
T Consensus 54 ~~e~l~~~l~~l~~~~~~~~~davl-------tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD 115 (281)
T COG2240 54 PPEQLADLLNGLEAIDKLGECDAVL-------TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGD 115 (281)
T ss_pred CHHHHHHHHHHHHhcccccccCEEE-------EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccC
Confidence 45566666655443 334567777 88888888888877777653 567888877665
No 488
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=58.28 E-value=1.8e+02 Score=27.98 Aligned_cols=80 Identities=14% Similarity=0.090 Sum_probs=42.2
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc---CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH---GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......... +.++..+.+|- -|.+.+++.++...+.+
T Consensus 8 ~vlVTGas~gIG~~~a~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 8 TVIITGASSGVGLYAAKALA-KRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDL-----GDLDSVRRFVDDFRALG 81 (322)
T ss_pred EEEEEcCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecC-----CCHHHHHHHHHHHHHhC
Confidence 45666554433344555666 57777777654333333333322 33455555553 26777877776654444
Q ss_pred CCeeEEEEe
Q 013892 269 ITVRALVVI 277 (434)
Q Consensus 269 ~~~~~i~l~ 277 (434)
.++..||.+
T Consensus 82 ~~iD~li~n 90 (322)
T PRK07453 82 KPLDALVCN 90 (322)
T ss_pred CCccEEEEC
Confidence 356555443
No 489
>PRK07856 short chain dehydrogenase; Provisional
Probab=58.23 E-value=1.5e+02 Score=27.13 Aligned_cols=76 Identities=12% Similarity=0.086 Sum_probs=41.7
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.. ...+..+..+..|- -|.+.+++.++...++..+
T Consensus 7 k~~lItGas~gIG~~la~~l~-~~g~~v~~~~r~~~~-----~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 7 RVVLVTGGTRGIGAGIARAFL-AAGATVVVCGRRAPE-----TVDGRPAEFHAADV-----RDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCChhh-----hhcCCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 345555555444445556666 577777766543221 23355555666553 2567777777665444335
Q ss_pred eeEEEEe
Q 013892 271 VRALVVI 277 (434)
Q Consensus 271 ~~~i~l~ 277 (434)
+..++.+
T Consensus 76 id~vi~~ 82 (252)
T PRK07856 76 LDVLVNN 82 (252)
T ss_pred CCEEEEC
Confidence 6666554
No 490
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=58.21 E-value=58 Score=28.70 Aligned_cols=77 Identities=26% Similarity=0.170 Sum_probs=49.4
Q ss_pred EEcCChHHHHHHHHHHHhcCCCCEEEEcC-CCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee
Q 013892 194 FLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR 272 (434)
Q Consensus 194 ~~t~G~~~al~~~l~~l~~~~gd~Vlv~~-p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~ 272 (434)
++|.|++..-......|. +.|-.|++.+ |+- .-.+.++..|.++++.|.+-. .-+++..++..++.+-.+..
T Consensus 13 lvtggasglg~ataerla-kqgasv~lldlp~s-kg~~vakelg~~~vf~padvt-----sekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 13 LVTGGASGLGKATAERLA-KQGASVALLDLPQS-KGADVAKELGGKVVFTPADVT-----SEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred EeecCcccccHHHHHHHH-hcCceEEEEeCCcc-cchHHHHHhCCceEEeccccC-----cHHHHHHHHHHHHhhcccee
Confidence 566666665555666666 5676555554 544 445677889999999887632 45667777777665544666
Q ss_pred EEEEe
Q 013892 273 ALVVI 277 (434)
Q Consensus 273 ~i~l~ 277 (434)
+.+-|
T Consensus 86 ~~vnc 90 (260)
T KOG1199|consen 86 ALVNC 90 (260)
T ss_pred eeeec
Confidence 55543
No 491
>PRK04296 thymidine kinase; Provisional
Probab=58.17 E-value=58 Score=28.96 Aligned_cols=98 Identities=7% Similarity=0.083 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCChh---HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEE
Q 013892 200 SPAVHMMMQLLIRSENDGILCPIPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVV 276 (434)
Q Consensus 200 ~~al~~~l~~l~~~~gd~Vlv~~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l 276 (434)
+.++..+.+.. ..|.+|++..|.+.. ....+...|..+..+.. ...+++.+.+.+ .++ +..+|++
T Consensus 17 T~~l~~~~~~~--~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~--~~~-~~dvviI 84 (190)
T PRK04296 17 TELLQRAYNYE--ERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEE--EGE-KIDCVLI 84 (190)
T ss_pred HHHHHHHHHHH--HcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHh--hCC-CCCEEEE
Confidence 34555554443 467888877664332 22334444543332221 133445444443 122 5667888
Q ss_pred ecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 013892 277 INPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 277 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
...+ .++.+++.++++.++..|+.+|+=.--.+
T Consensus 85 DEaq-----~l~~~~v~~l~~~l~~~g~~vi~tgl~~~ 117 (190)
T PRK04296 85 DEAQ-----FLDKEQVVQLAEVLDDLGIPVICYGLDTD 117 (190)
T ss_pred Eccc-----cCCHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 7653 47778888999998899988887655444
No 492
>PRK09242 tropinone reductase; Provisional
Probab=58.12 E-value=1.5e+02 Score=27.16 Aligned_cols=99 Identities=11% Similarity=0.039 Sum_probs=51.1
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH---Hc--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~---~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
.+++|.|+...-..+...|. ..|.+|++..-.-........ .. +.++..+.+|- .+.+.+++.++...+
T Consensus 11 ~~lItGa~~gIG~~~a~~l~-~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 11 TALITGASKGIGLAIAREFL-GLGADVLIVARDADALAQARDELAEEFPEREVHGLAADV-----SDDEDRRAILDWVED 84 (257)
T ss_pred EEEEeCCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 45555544443344455555 578787776544333322222 22 56777777663 367777777776544
Q ss_pred cCCCeeEEEEecCCCCCc--cCCCHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~ 296 (434)
+..+...|+.+...+..+ ...+.+++++..
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~ 116 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIF 116 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 433566665443322211 134555555433
No 493
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=58.04 E-value=1.1e+02 Score=32.46 Aligned_cols=100 Identities=17% Similarity=0.163 Sum_probs=61.4
Q ss_pred cCChHHHHHHHHHHHhcCCCCEEEEc-CCCChhH------HHHHHHcCC-eE-EEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 196 TDGASPAVHMMMQLLIRSENDGILCP-IPQYPLY------SASIALHGG-TL-VPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 196 t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~~------~~~~~~~g~-~~-~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
-.+...+...+..++. .+.+|++- +..-.+. ...++..|+ .+ .++|-...++|+++.+.+++..+.
T Consensus 52 l~~m~~a~~ri~~ai~--~~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~--- 126 (575)
T PRK11070 52 LSGIEKAVELLYNALR--EGTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHAR--- 126 (575)
T ss_pred hhCHHHHHHHHHHHHH--CCCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHhc---
Confidence 3667777777777764 45555543 3222222 234556677 34 445655567899999998886654
Q ss_pred cCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCC
Q 013892 267 KGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay 312 (434)
.+++|+.+. +|.. + .+.++.|++.|+-+|+=|-|
T Consensus 127 ---~~~LiItvD----~Gi~-~----~e~i~~a~~~gidvIVtDHH 160 (575)
T PRK11070 127 ---GAQLIVTVD----NGIS-S----HAGVAHAHALGIPVLVTDHH 160 (575)
T ss_pred ---CCCEEEEEc----CCcC-C----HHHHHHHHHCCCCEEEECCC
Confidence 567777774 3333 2 34456788889866665544
No 494
>PRK05650 short chain dehydrogenase; Provisional
Probab=57.77 E-value=1.4e+02 Score=27.72 Aligned_cols=81 Identities=14% Similarity=-0.018 Sum_probs=45.1
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+...|. ..|..|++....-...... ++..|.++..+.+|- .|.+.+++.++...++.
T Consensus 2 ~vlVtGasggIG~~la~~l~-~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~i~~~~ 75 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWA-REGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDV-----RDYSQLTALAQACEEKW 75 (270)
T ss_pred EEEEecCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccC-----CCHHHHHHHHHHHHHHc
Confidence 35666655544455555666 5787887765443332222 333466676666653 36677777766544443
Q ss_pred CCeeEEEEec
Q 013892 269 ITVRALVVIN 278 (434)
Q Consensus 269 ~~~~~i~l~~ 278 (434)
.+...++.+.
T Consensus 76 ~~id~lI~~a 85 (270)
T PRK05650 76 GGIDVIVNNA 85 (270)
T ss_pred CCCCEEEECC
Confidence 3566666553
No 495
>PRK14467 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=57.46 E-value=1.5e+02 Score=29.38 Aligned_cols=38 Identities=16% Similarity=0.026 Sum_probs=27.9
Q ss_pred Ee-cCCCCCcc----CCCHHHHHHHHHHHHHcCCEEEEccCCC
Q 013892 276 VI-NPGNPTGQ----VLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (434)
Q Consensus 276 l~-~p~NPtG~----~~~~~~l~~i~~~~~~~~~~li~Deay~ 313 (434)
++ -|-||.+. ..+.++++++.++.+++|+.+.+=...+
T Consensus 286 VnLIPynp~~~~~~~~ps~e~i~~f~~~L~~~gi~v~vR~~~G 328 (348)
T PRK14467 286 VNLIPFNPDPELPYERPELERVYKFQKILWDNGISTFVRWSKG 328 (348)
T ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHHHHHCCCcEEEeCCCC
Confidence 44 67677653 5677889999999999998887765443
No 496
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=57.20 E-value=1.6e+02 Score=27.05 Aligned_cols=80 Identities=13% Similarity=-0.023 Sum_probs=44.9
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----cC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HG-GTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
.+++|.|+...-..+.+.|. ..|..|++.............. .+ .++..+.+|-. |.+.+.+.+++..+
T Consensus 4 ~ilItG~~~~IG~~la~~l~-~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~i~~~~~~~~~ 77 (259)
T PRK12384 4 VAVVIGGGQTLGAFLCHGLA-EEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT-----SEQSVLALSRGVDE 77 (259)
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCC-----CHHHHHHHHHHHHH
Confidence 46666666554455556666 5777777665544333222221 23 45666666533 66777777776554
Q ss_pred cCCCeeEEEEe
Q 013892 267 KGITVRALVVI 277 (434)
Q Consensus 267 ~g~~~~~i~l~ 277 (434)
+..++..++.+
T Consensus 78 ~~~~id~vv~~ 88 (259)
T PRK12384 78 IFGRVDLLVYN 88 (259)
T ss_pred HcCCCCEEEEC
Confidence 43356665544
No 497
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=56.62 E-value=1.8e+02 Score=27.55 Aligned_cols=92 Identities=15% Similarity=0.105 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCh---hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEE
Q 013892 200 SPAVHMMMQLLIRSENDGILCPIPQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVV 276 (434)
Q Consensus 200 ~~al~~~l~~l~~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l 276 (434)
..++..+++.+....-|.|++++--+. .+...++.+|..++++--. ..+.+.|++..+. ....||+
T Consensus 108 ~~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaP-----tt~~~rl~~i~~~------a~GFiY~ 176 (265)
T COG0159 108 NYGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVAP-----TTPDERLKKIAEA------ASGFIYY 176 (265)
T ss_pred HhhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeCC-----CCCHHHHHHHHHh------CCCcEEE
Confidence 445566666665223499999995443 3666777888888776432 2245566655544 3457777
Q ss_pred ecCCCCCccCCC-HHHHHHHHHHHHHc
Q 013892 277 INPGNPTGQVLA-EENQRAIVDFCKKE 302 (434)
Q Consensus 277 ~~p~NPtG~~~~-~~~l~~i~~~~~~~ 302 (434)
..-+--||.-.. ...+.++++..+++
T Consensus 177 vs~~GvTG~~~~~~~~~~~~v~~vr~~ 203 (265)
T COG0159 177 VSRMGVTGARNPVSADVKELVKRVRKY 203 (265)
T ss_pred EecccccCCCcccchhHHHHHHHHHHh
Confidence 777777888776 33478888888876
No 498
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=56.59 E-value=1.6e+02 Score=26.81 Aligned_cols=80 Identities=15% Similarity=0.096 Sum_probs=45.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcC-CCChhHH---HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~-p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+...|. ..|..|++.. ..-.... ..+...|.++..+++|-. |.+.+.+.+++..++
T Consensus 8 ~~lItG~s~~iG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 8 VAIVTGGAKGIGKAITVALA-QEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVS-----KVEDANRLVEEAVNH 81 (247)
T ss_pred EEEEECCCCHHHHHHHHHHH-HcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 45555555444445555566 5777876532 2112222 223344667777777643 677888887776554
Q ss_pred CCCeeEEEEe
Q 013892 268 GITVRALVVI 277 (434)
Q Consensus 268 g~~~~~i~l~ 277 (434)
..++..|+.+
T Consensus 82 ~~~id~vi~~ 91 (247)
T PRK12935 82 FGKVDILVNN 91 (247)
T ss_pred cCCCCEEEEC
Confidence 4456776655
No 499
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=56.38 E-value=1.6e+02 Score=26.82 Aligned_cols=75 Identities=11% Similarity=0.122 Sum_probs=44.1
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+...|. ..|..|++..... ....+.++..+++|- .|.+.+++.++...+...+
T Consensus 9 k~vlItGas~~iG~~la~~l~-~~G~~v~~~~~~~------~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFV-EAGAKVIGFDQAF------LTQEDYPFATFVLDV-----SDAAAVAQVCQRLLAETGP 76 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEecch------hhhcCCceEEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 456776665555555566666 5787777765443 233455666676653 3677777777665444334
Q ss_pred eeEEEEe
Q 013892 271 VRALVVI 277 (434)
Q Consensus 271 ~~~i~l~ 277 (434)
...++.+
T Consensus 77 id~vi~~ 83 (252)
T PRK08220 77 LDVLVNA 83 (252)
T ss_pred CCEEEEC
Confidence 5555543
No 500
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=56.15 E-value=35 Score=32.75 Aligned_cols=75 Identities=9% Similarity=0.143 Sum_probs=42.3
Q ss_pred cCCCChhHHHHHHHc--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
--|+|+...++.+.. ..-++.+| .+...+.+++..+. .++.+++...+- ++.+.++|.++
T Consensus 48 G~~~y~sv~dlp~~~~~Dlavi~vp----------a~~v~~~l~e~~~~--Gvk~avIis~Gf------~e~~~~~l~~~ 109 (286)
T TIGR01019 48 GLPVFDSVKEAVEETGANASVIFVP----------APFAADAIFEAIDA--GIELIVCITEGI------PVHDMLKVKRY 109 (286)
T ss_pred CeeccCCHHHHhhccCCCEEEEecC----------HHHHHHHHHHHHHC--CCCEEEEECCCC------CHHHHHHHHHH
Confidence 345666666655542 33344443 23333344433333 566776665432 33456889999
Q ss_pred HHHcCCEEEEccCCC
Q 013892 299 CKKEGLVLLADEVYQ 313 (434)
Q Consensus 299 ~~~~~~~li~Deay~ 313 (434)
|+++|+.++==.+.+
T Consensus 110 a~~~girilGPNc~G 124 (286)
T TIGR01019 110 MEESGTRLIGPNCPG 124 (286)
T ss_pred HHHcCCEEECCCCce
Confidence 999999887555444
Done!